BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12061
(626 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332023779|gb|EGI64003.1| Contactin [Acromyrmex echinatior]
Length = 1220
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/624 (64%), Positives = 499/624 (79%), Gaps = 9/624 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGGNVTI CNPEAAP+PKF+WKKDGNIIGSGGRR+I E GNL+ISPVSRDD G Y C
Sbjct: 598 YAAEGGNVTIMCNPEAAPRPKFIWKKDGNIIGSGGRRRILETGNLIISPVSRDDEGTYVC 657
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TATN +G DE++GRLIVL GP + ++LP +I + + NL L C H +E+LD+AYIWTHN
Sbjct: 658 TATNQYGNDETRGRLIVLRGPQFVQRLPSQIILYYNNNLTLHCLGHIDEMLDIAYIWTHN 717
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI + DL P +NIDG L I NA+F +AGEYEC++KS VG IS+K +IV+GPP
Sbjct: 718 GMRIRDKDLQN--NPRLNIDGEYLNIINATFTEAGEYECILKSAVGAISSKLNLIVQGPP 775
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+ + KTSAT++W+DGA NG+PIT Y I ART+WN TWF++ E++ E DRY
Sbjct: 776 GPPGGVQVMNIFKTSATLRWSDGAMNGKPITMYTISARTDWNQTWFSLVENITAFEADRY 835
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA++ENVL P+STYEF+V+A NE GYG PS PSP+Y+TP+DKP +APS I GGGGK
Sbjct: 836 NGRKEANLENVLNPYSTYEFRVLAFNEFGYGPPSLPSPRYSTPSDKPAKAPSNISGGGGK 895
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W+PL QN P +YYKIFWR+K + EFQS +L+EYGN+G +VV IP ++YY
Sbjct: 896 IGDLTITWDPLNPSDQNGPGVYYKIFWRRKGYEKEFQSLSLQEYGNIGSSVVPIPQQYYY 955
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQAIN +G GP S + T++SAEDMPQ APQ V+S +NST++NVTW PIE RE
Sbjct: 956 TEYEVKVQAINAMGEGPVSNIETVYSAEDMPQAAPQLVYSMSYNSTSLNVTWQPIEQTRE 1015
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG+LIGHRIKYW++ EE A YYLSRTTR W+L+VGLQPDT YYVKVMAYN+AGEGP
Sbjct: 1016 RVRGKLIGHRIKYWQKTISEEDATYYLSRTTRPWSLVVGLQPDTYYYVKVMAYNSAGEGP 1075
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESER+LERTYRK PQKPPS+V+I G+NP+T+ V WRYV+PS EEEP+IGYK+RVWE DQD
Sbjct: 1076 ESERFLERTYRKPPQKPPSSVNIYGVNPSTIRVVWRYVTPSLEEEPLIGYKIRVWEYDQD 1135
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTI+P G+ L+A + +LSPGKRY +RVL FSNGGDGRMSSP +FQMG+ + F+S
Sbjct: 1136 MSTANDTIVPGGSKLEAYVNNLSPGKRYRLRVLGFSNGGDGRMSSPTHSFQMGDTEAFRS 1195
Query: 600 GSPALYSASTTLLLVMSSTLYIFV 623
SA + +L + +++ +
Sbjct: 1196 ------SAGSNILDITLGIIFLLL 1213
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P P + W K G+I+ G F N L++ V +D G Y C N
Sbjct: 415 GETVRLECIAFGYPVPSYNWTKRGSILPRGAYTANF-NRVLILPRVHVEDQGEYVCRVYN 473
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
E+ +L + P++ L K + H +L C A + DV Y W NG +
Sbjct: 474 DRLSIENSVQLTIQATPNFTIPLVDK-HMDDHADLTWTCEAFG--IPDVTYSWFKNGKLL 530
Query: 125 GNMDLNELETPNINIDGGLLEITNA-SFADAGEYECVVKSTV 165
++ L E + I +L I + S D G Y+C ++ +
Sbjct: 531 DSLSLEERD--RYTIQDNVLNIHHVDSEKDQGMYQCCARNQL 570
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 12/185 (6%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPV-SRDDS 55
+ + ++T C P + W K+G ++ S R ++ L I V S D
Sbjct: 500 HMDDHADLTWTCEAFGIPDVTYSWFKNGKLLDSLSLEERDRYTIQDNVLNIHHVDSEKDQ 559
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G+Y C A N S +L VL +++ P + A + + E +
Sbjct: 560 GMYQCCARNQLRTTYSSAQLRVLSLKPSFKKRPMESETYAAEGGNVTIMCNPEAAPRPKF 619
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
IW +G IG+ + ++ G L I+ S D G Y C + G T+ +I
Sbjct: 620 IWKKDGNIIGSGGRRRI------LETGNLIISPVSRDDEGTYVCTATNQYGNDETRGRLI 673
Query: 176 V-EGP 179
V GP
Sbjct: 674 VLRGP 678
>gi|383850888|ref|XP_003701006.1| PREDICTED: contactin-like [Megachile rotundata]
Length = 1650
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/602 (68%), Positives = 491/602 (81%), Gaps = 3/602 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR+I E GNL+ISPVS DD G Y C
Sbjct: 603 YAAERGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRRILEGGNLIISPVSSDDEGTYVC 662
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ATN +G DE++GRLIVL P + E+LP +IT A +N LRC +E+LDVAYIW HN
Sbjct: 663 SATNQYGSDETRGRLIVLRRPYFLEKLPQRITTAVMQNQTLRCIGEVDEMLDVAYIWKHN 722
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI + DL P + IDGG L I NA+FA+AG+YEC++KS VG+IS+ TTV++EGPP
Sbjct: 723 GLRIRDEDL--ASNPRLRIDGGELNIINATFAEAGDYECIIKSAVGEISSTTTVMIEGPP 780
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQVV + KTS T++WTDGA NGRPIT Y + ARTNWN TWFNV E++ EVDRY
Sbjct: 781 GPPGGVQVVNIVKTSTTLRWTDGAFNGRPITMYTVSARTNWNHTWFNVIENITAIEVDRY 840
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA +ENVL P++TYEF V A NELGY PS+PSPQY+TP+DKPY+ PS IGGGGGK
Sbjct: 841 NGRKEAYLENVLNPYTTYEFCVSAFNELGYSVPSAPSPQYSTPSDKPYKIPSNIGGGGGK 900
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W PLP +QN P IYYK+FWR+K ++ EFQS +LK GN+G +VV I ++YY
Sbjct: 901 IGDLTIAWNPLPPSEQNGPGIYYKVFWRRKYHEKEFQSLSLKGQGNIGRSVVAIQPQYYY 960
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQAIN +G GP S VTIFSAEDMPQVAPQ V + +NST++ V+W+PIE RE
Sbjct: 961 TEYEVKVQAINSLGSGPVSNEVTIFSAEDMPQVAPQQVVAHSYNSTSLKVSWSPIEQTRE 1020
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG+LIGHRIKYWKE N EE AVYYLSR+T+ WAL+VGLQPDT YYVKVMAYN+AGEGP
Sbjct: 1021 KVRGKLIGHRIKYWKESNREEDAVYYLSRSTQPWALVVGLQPDTYYYVKVMAYNSAGEGP 1080
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESERYLERTYRKAPQKPPS+V + GINP+T+ V WRYV PS EEEP+IGYK+RVWE+DQD
Sbjct: 1081 ESERYLERTYRKAPQKPPSSVTVNGINPSTIRVVWRYVQPSLEEEPLIGYKIRVWELDQD 1140
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTIIP G+ L+ADI +L+PGK YH+RVLAFS GGDGRMSSP TFQMG+E FKS
Sbjct: 1141 MSTANDTIIPGGSKLEADITNLTPGKAYHLRVLAFSKGGDGRMSSPTRTFQMGDEALFKS 1200
Query: 600 GS 601
+
Sbjct: 1201 SA 1202
>gi|340724306|ref|XP_003400523.1| PREDICTED: contactin-like [Bombus terrestris]
Length = 1642
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/603 (68%), Positives = 493/603 (81%), Gaps = 4/603 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GNVTIFCNPEAAP+PKFVWKKDGN+IGSGGRRKI E GNL+ISPVSRDD G Y C
Sbjct: 602 YAAEKGNVTIFCNPEAAPRPKFVWKKDGNVIGSGGRRKILETGNLIISPVSRDDEGTYIC 661
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTH 119
TATN +G D+++GRLIVL GP + E+LP +T A +N LRC +E+LDVAYIW H
Sbjct: 662 TATNQYGSDDTRGRLIVLRGPQFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKH 721
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
NG+RI + DL + P ++IDG L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGP
Sbjct: 722 NGLRIRDEDL--INNPRLHIDGEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGP 779
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGVQVV + KTS T++WTDGA NG+PIT Y + ARTNWN TW N+ E++ EVDR
Sbjct: 780 PGPPGGVQVVNIVKTSTTLRWTDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDR 839
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
Y GRKEA +ENVL P++TYEF V A NELGY PSSPSPQY+TP+DKP + PS IGGGGG
Sbjct: 840 YNGRKEAYLENVLNPYTTYEFCVSAFNELGYSLPSSPSPQYSTPSDKPTKVPSNIGGGGG 899
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
KIGDL+I+W+PLP +QN P IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I ++Y
Sbjct: 900 KIGDLTITWDPLPSSEQNGPGIYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYY 959
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
YTEYEVKVQA N +G GP S VTIFSAEDMPQVAPQ V + G+NST++ V+W PIE R
Sbjct: 960 YTEYEVKVQAANALGFGPISNAVTIFSAEDMPQVAPQQVIAHGYNSTSLKVSWLPIEQTR 1019
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
E IRG+LIGHRIKYWKE N EE AVYYLSR+ R WAL+VGLQPDT YYVKVMAYN+AGEG
Sbjct: 1020 ERIRGKLIGHRIKYWKESNKEEDAVYYLSRSARPWALVVGLQPDTYYYVKVMAYNSAGEG 1079
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
PESERYLERT+RKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+RVWE+DQ
Sbjct: 1080 PESERYLERTFRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRVWELDQ 1139
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
DMS ANDTIIP G+ L+A I +LSPGK YH+RVLAFSNGGDGRMSSP TFQMG+ F+
Sbjct: 1140 DMSTANDTIIPGGSKLEAYITNLSPGKAYHLRVLAFSNGGDGRMSSPTHTFQMGDAAAFR 1199
Query: 599 SGS 601
S +
Sbjct: 1200 SSA 1202
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 6/180 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P P + W + G + G + N L+I V DD G Y+C N
Sbjct: 417 GVEVRLECVAFGYPIPSYNWTRRGASLPRGSYTTSY-NRVLIIPKVHVDDQGEYTCRVYN 475
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
E+ RL + P++ L K + L C A + DV+Y W NG +
Sbjct: 476 DRSAIENSVRLTIQAAPNFTIPLVDK-HMDNRGELTWTCEAFG--IPDVSYSWFRNGEIL 532
Query: 125 GNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG-KISTKTTVIVEGPPGL 182
L + +I +L I D Y+C ++ + K S+ I+ P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSF 592
>gi|350420740|ref|XP_003492608.1| PREDICTED: contactin-like [Bombus impatiens]
Length = 1813
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/603 (68%), Positives = 492/603 (81%), Gaps = 4/603 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GNVTIFCNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y C
Sbjct: 602 YAAEKGNVTIFCNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYIC 661
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTH 119
TATN +G D+++GRLIVL GP + E+LP +T A +N LRC +E+LDVAYIW H
Sbjct: 662 TATNQYGSDDTRGRLIVLRGPQFIEKLPQHVTSAVMQNQTLRCMGEVVDEMLDVAYIWKH 721
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
NG+RI + DL + P ++IDG L I NA+FA+AGEY+C++KS VG+IS+KTTV +EGP
Sbjct: 722 NGLRIRDEDL--INNPRLHIDGEELNIINATFAEAGEYQCIIKSAVGEISSKTTVTIEGP 779
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGVQVV + KTS T++WTDGA NG+PIT Y + ARTNWN TW N+ E++ EVDR
Sbjct: 780 PGPPGGVQVVNIVKTSTTLRWTDGAFNGKPITMYTVSARTNWNHTWSNIIENITAVEVDR 839
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
Y GRKEA +ENVL P++TYEF V A NELGY PSSPSPQY+TP DKP + PS IGGGGG
Sbjct: 840 YNGRKEAYLENVLNPYTTYEFCVSAFNELGYSLPSSPSPQYSTPPDKPTKVPSNIGGGGG 899
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
KIGDL+I+W+PLP +QN P IYYK+FWR+K ++TEFQS +LK+YGN G +VV+I ++Y
Sbjct: 900 KIGDLTITWDPLPSSEQNGPGIYYKVFWRQKYHETEFQSLSLKDYGNAGRSVVQIQQQYY 959
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
YTEYEVKVQA N +G GP S VTIFSAEDMPQVAPQ V + G+NST++ V+W PIE R
Sbjct: 960 YTEYEVKVQAANALGFGPISNAVTIFSAEDMPQVAPQQVVAHGYNSTSLKVSWLPIEQTR 1019
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
E IRG+LIGHRIKYWKE N EE AVYYLSR+ R WAL+VGLQPDT YYVKVMAYN+AGEG
Sbjct: 1020 ERIRGKLIGHRIKYWKESNKEEDAVYYLSRSARPWALVVGLQPDTYYYVKVMAYNSAGEG 1079
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
PESERYLERT+RKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+RVWE+DQ
Sbjct: 1080 PESERYLERTFRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRVWELDQ 1139
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
DMS ANDTIIP G+ L+A I +LSPGK YH+RVLAFSNGGDGRMSSP TFQMG+ F+
Sbjct: 1140 DMSTANDTIIPGGSKLEAYITNLSPGKAYHLRVLAFSNGGDGRMSSPTHTFQMGDAAAFR 1199
Query: 599 SGS 601
S +
Sbjct: 1200 SSA 1202
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 6/180 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P P + W + G + G + N L+I V DD G Y+C N
Sbjct: 417 GEEVRLECVAFGYPIPSYNWTRRGASLPRGSYTTSY-NRVLIIPKVHVDDQGEYTCRVYN 475
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
E+ RL + P++ L K + L C A + DV+Y W NG +
Sbjct: 476 DRSAIENSVRLTIQAAPNFTIPLVDK-HMDNRGELTWTCEAFG--IPDVSYSWFRNGEML 532
Query: 125 GNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG-KISTKTTVIVEGPPGL 182
L + +I +L I D Y+C ++ + K S+ I+ P
Sbjct: 533 NMETLPSQDRDRYSIQDNVLSIKYLDPERDQAMYQCRARNQLKTKYSSAQLRILSLKPSF 592
>gi|380021534|ref|XP_003694618.1| PREDICTED: contactin-like [Apis florea]
Length = 1641
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/602 (68%), Positives = 490/602 (81%), Gaps = 3/602 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GN+TI CNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y C
Sbjct: 602 YAAEKGNITIICNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYIC 661
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TATN +G DE++GRLIVL GP + E+LP +IT A +N LRC+ +E+LDVAYIW HN
Sbjct: 662 TATNQYGNDETRGRLIVLRGPQFMEKLPQQITTAVMQNQTLRCTGEIDEMLDVAYIWKHN 721
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI + DL + P +NI+G L I NA+FA+AGEYEC++KS V +IS+KT V +EGPP
Sbjct: 722 GLRIRDEDL--INNPRLNINGEELNIINATFAEAGEYECIIKSAVSEISSKTVVTIEGPP 779
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV + KTS T++WTDGA NG+PIT Y I ARTNWN TWF + E++ EVDRY
Sbjct: 780 GPPGGVQVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWNHTWFTIIENITAIEVDRY 839
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA +ENVL P++TYEF+V A NELGY PSSPSPQY+T +DKP + P IGGGGGK
Sbjct: 840 NGRKEAYLENVLNPYTTYEFRVSAFNELGYSLPSSPSPQYSTSSDKPMKVPFNIGGGGGK 899
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W PLP +QN P IYYK+FWR+K ++TEFQS +LK YGNVG +VV I ++YY
Sbjct: 900 IGDLTITWNPLPPSEQNGPGIYYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYY 959
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQA+N +G GP S VTIFSAEDMPQVAPQ V ++ +NST++ V+W PIE RE
Sbjct: 960 TEYEVKVQAVNALGSGPISNAVTIFSAEDMPQVAPQQVVAQSYNSTSLKVSWKPIEETRE 1019
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
IRG+LIGHRIKYWKE+N EE AVYYLSR+ R WAL+VGLQPDT YYVKVMAYN+AGEGP
Sbjct: 1020 KIRGKLIGHRIKYWKENNREENAVYYLSRSRRPWALVVGLQPDTYYYVKVMAYNSAGEGP 1079
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESERYLERTYRKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+RVWE+DQD
Sbjct: 1080 ESERYLERTYRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRVWELDQD 1139
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTIIP G+ L+ADI +LSPGK YH+RVLAFS GGDGRMSSP TFQMG+ F+S
Sbjct: 1140 MSTANDTIIPGGSKLEADITNLSPGKAYHLRVLAFSKGGDGRMSSPTHTFQMGDAAAFRS 1199
Query: 600 GS 601
+
Sbjct: 1200 SA 1201
>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
Length = 1641
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/602 (68%), Positives = 488/602 (81%), Gaps = 3/602 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GN+TI CNPEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y C
Sbjct: 602 YAAEKGNITIICNPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYIC 661
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TATN +G DE++GRLIVL GP + E+LP +IT A +N LRC +E+LDVAYIW HN
Sbjct: 662 TATNQYGNDETRGRLIVLRGPQFMEKLPQQITTAVMQNQTLRCIGEIDEMLDVAYIWKHN 721
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI + DL + P +NI+G L I NA+FA+AGEYEC++KS V +IS+KT V +EGPP
Sbjct: 722 GLRIRDEDL--INNPRLNINGEELNIINATFAEAGEYECIIKSAVSEISSKTIVTIEGPP 779
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV + KTS T++WTDGA NG+PIT Y I ARTNWN TWF + E++ EVDRY
Sbjct: 780 GPPGGVQVKNIVKTSTTLRWTDGAFNGKPITMYSISARTNWNHTWFIIIENITAIEVDRY 839
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA +ENVL P++TYEF+V A NELGY PSSPSPQY+T DKP + P IGGGGGK
Sbjct: 840 NGRKEAYLENVLNPYTTYEFRVSAFNELGYSLPSSPSPQYSTSPDKPMKVPFNIGGGGGK 899
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W PLP +QN P IYYK+FWR+K ++TEFQS +LK YGNVG +VV I ++YY
Sbjct: 900 IGDLTITWNPLPPSEQNGPGIYYKVFWRRKYHETEFQSLSLKNYGNVGRSVVPIQQQYYY 959
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQA+N +G GP S VTIFSAEDMPQVAPQ V ++ +NST++ V+W PIE RE
Sbjct: 960 TEYEVKVQAVNALGSGPISNAVTIFSAEDMPQVAPQQVVAQSYNSTSLKVSWKPIEETRE 1019
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
IRG+LIGHRIKYWKE+N EE AVYYLSRT R WAL+VGLQPDT YYVKVMAYN+AGEGP
Sbjct: 1020 KIRGKLIGHRIKYWKENNREENAVYYLSRTRRPWALVVGLQPDTYYYVKVMAYNSAGEGP 1079
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESERYLERTYRKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+RVWE+DQD
Sbjct: 1080 ESERYLERTYRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRVWELDQD 1139
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTIIP G+ L+ADI +LSPGK YH+RVLAFS GGDGRMSSP TFQMG+ F+S
Sbjct: 1140 MSTANDTIIPGGSKLEADITNLSPGKAYHLRVLAFSKGGDGRMSSPTHTFQMGDAAAFRS 1199
Query: 600 GS 601
+
Sbjct: 1200 SA 1201
>gi|307183641|gb|EFN70344.1| Contactin [Camponotus floridanus]
Length = 1156
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/625 (67%), Positives = 506/625 (80%), Gaps = 6/625 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGGNVTI C PEAAP+PKFVWKKDGN+IGSGGRR+I E GNL+ISPVSRDD G Y C
Sbjct: 534 YAAEGGNVTIVCKPEAAPRPKFVWKKDGNVIGSGGRRRILETGNLIISPVSRDDEGTYVC 593
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TATN +G DE++GRLIVL GP E+LPP++ ++ + N LRC +T+E+LDVAYIW HN
Sbjct: 594 TATNQYGSDETRGRLIVLRGPELIERLPPRLIMSYNNNQTLRCLGNTDEMLDVAYIWRHN 653
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI + DL + +IDG L+I NA+FA++GEYEC++KS VG+IS+KT +IV GPP
Sbjct: 654 GMRIRDKDLEN--NRHWHIDGEYLDIINATFAESGEYECILKSAVGEISSKTDLIVNGPP 711
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQVV + K SAT++WTDGA NG+ IT Y I ARTNWN TWF + E++ E+DRY
Sbjct: 712 GPPGGVQVVNIVKISATLRWTDGAFNGKVITMYTISARTNWNRTWFPLVENITAIEMDRY 771
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA +ENVL P++TYEF+++A NELGYG PSSPSPQY+TP DKP ++PS I GGGGK
Sbjct: 772 NGRKEAFLENVLNPYTTYEFRILAFNELGYGPPSSPSPQYSTPPDKPTKSPSNISGGGGK 831
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W+PLP QN P IYYKIFWR+K +D+E+QS L+EYGNVG +VV I S+FYY
Sbjct: 832 IGDLTITWDPLPSSDQNGPGIYYKIFWRRKGHDSEYQSLPLREYGNVGSSVVPIQSQFYY 891
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T+YEVKVQAIN +G GP SE T++SAEDMPQVAPQ V+S +NST++N+TW PIE RE
Sbjct: 892 TKYEVKVQAINVIGEGPISETTTVYSAEDMPQVAPQQVYSMSYNSTSLNITWQPIEQTRE 951
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG+LIGHRIKYWKE PEE A YYLSRTTR W+L+VGLQPDT YYVKVMAYN+AGEGP
Sbjct: 952 RVRGKLIGHRIKYWKESVPEEHATYYLSRTTRPWSLVVGLQPDTYYYVKVMAYNSAGEGP 1011
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESERYLERTYRKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+R+WEVDQD
Sbjct: 1012 ESERYLERTYRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRIWEVDQD 1071
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTIIP G+ L+ADI +LSPGK YH+RVLAFSNGGDGRMSSP TFQMG+ F+S
Sbjct: 1072 MSTANDTIIPGGSKLEADIRNLSPGKAYHLRVLAFSNGGDGRMSSPTHTFQMGDAAAFRS 1131
Query: 600 --GSPALYSA-STTLLLVMSSTLYI 621
G+ L +A T LL + YI
Sbjct: 1132 SAGNKILDAALGITFLLFLRVFDYI 1156
>gi|242009529|ref|XP_002425536.1| Contactin precursor, putative [Pediculus humanus corporis]
gi|212509411|gb|EEB12798.1| Contactin precursor, putative [Pediculus humanus corporis]
Length = 1266
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/617 (66%), Positives = 491/617 (79%), Gaps = 5/617 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGGNVTI CNPEAAP+PKFVWKK+ +I+GSGGRRKI ENGNL+ISPVSRDD G+Y+C
Sbjct: 645 YAAEGGNVTIVCNPEAAPRPKFVWKKNNDILGSGGRRKILENGNLIISPVSRDDEGLYTC 704
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TA+N +G+DES+G LIVL P PP+I + N L C A+T+ELLD AYIWTHN
Sbjct: 705 TASNNYGVDESRGLLIVLRAPKMTSTFPPQIITSVMENFTLNCEANTDELLDTAYIWTHN 764
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI D + L + DGG+L + N + A+AGEYEC+VKS VG+ISTKT VIV GPP
Sbjct: 765 GIRIKERDSSNLR---LIPDGGILHVINTTLAEAGEYECIVKSAVGRISTKTNVIVHGPP 821
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQVV + TSATIQWTDGA+NGRPI +Y + ARTNWNSTW NV++ + +EVDRY
Sbjct: 822 GPPGGVQVVSISTTSATIQWTDGASNGRPILYYNVAARTNWNSTWQNVTKLITAREVDRY 881
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
RKEA +ENVL PWS YEF+V+A N++G G PS PSPQY+TP D P + PS IGGGGGK
Sbjct: 882 NNRKEAILENVLSPWSIYEFRVLAVNQIGPGYPSLPSPQYSTPPDSPNKPPSNIGGGGGK 941
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDLSI+W PLP + QN P IYYKIFWR+ + EF+ + LKE+GNVG AVVR+ SE+Y+
Sbjct: 942 IGDLSITWTPLPPQDQNGPGIYYKIFWRRNGTNREFEFKELKEFGNVGAAVVRVNSEYYF 1001
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQAIND+G GPES V I+SAE+MP APQ V +R FNST++NVTW PI + R+
Sbjct: 1002 TEYEVKVQAINDIGKGPESAVHVIYSAEEMPLAAPQQVSARSFNSTSLNVTWTPIPMRRD 1061
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG+LIGHR+KYWK E AVYYLSRT R WALIVGLQPDT Y VKVMAYNNAGEGP
Sbjct: 1062 IVRGKLIGHRLKYWKTSQQEFEAVYYLSRTLRPWALIVGLQPDTYYNVKVMAYNNAGEGP 1121
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESE+++ERT+RKAPQKPPS+VH+ GINP+T+ V WRYVSPS +EEP+IGYKVR+WEVDQD
Sbjct: 1122 ESEKFIERTFRKAPQKPPSSVHVMGINPSTIKVVWRYVSPSHDEEPLIGYKVRIWEVDQD 1181
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE-KEFK 598
M+ ANDTI+PVG+TL+A I L+PGK+YH+RVLAFSNGGDGRMSSPA TFQMG +
Sbjct: 1182 MASANDTIVPVGSTLEAYINTLTPGKQYHLRVLAFSNGGDGRMSSPAHTFQMGPTLAQTS 1241
Query: 599 SGSPALYSASTTLLLVM 615
S + A+YS+ T +L
Sbjct: 1242 SQTKAIYSSVTVFVLTF 1258
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGS-----GGRRKIFENGNLL----ISPVSRDDSGI 57
++T C P + W ++G + R + F N+L ++P+S D+G+
Sbjct: 551 DLTWTCEAFGIPDVNYTWFRNGLPLNPFNLPPQDRDRYFVQDNILQIKRLNPLS--DAGM 608
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A+N S +L VL +E+ P + A + + E ++W
Sbjct: 609 YQCRASNQLKTKYSSAQLRVLSFKPSFEKKPLEAETYAAEGGNVTIVCNPEAAPRPKFVW 668
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
N +G+ ++ ++ G L I+ S D G Y C + G ++ +IV
Sbjct: 669 KKNNDILGSGGRRKI------LENGNLIISPVSRDDEGLYTCTASNNYGVDESRGLLIVL 722
Query: 178 GPPGL 182
P +
Sbjct: 723 RAPKM 727
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 166/451 (36%), Gaps = 79/451 (17%)
Query: 2 AGEGGNV----TIFCNPEAA-PKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDD 54
A E GN TI+C+P P + W +D N + R + +G L S + D
Sbjct: 349 APESGNQNWGKTIYCDPPPHFPDINYKWTRDYFPNFVEEDRRVFVSFDGALYFSALQEID 408
Query: 55 SGIYSCTATNVHGMDESKGR------LIVLHGPSYYE-QLP---PKI---TIAAHRNLQL 101
G YSCTA S GR L V+ P+Y + + P PK+ A ++++L
Sbjct: 409 RGSYSCTA---QSKVSSIGRTGPFFHLNVVTNPNYQQLKFPNNFPKVFPEAPLAGKDVRL 465
Query: 102 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
C A + Y WT G + + N N +L + AS D GEY C
Sbjct: 466 ECIAFGYPV--PTYNWTRRGAPMPRGSV----FTNFN---RVLILPQASVEDQGEYVCRA 516
Query: 162 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTN 220
+ I V ++ P + + + H + WT A G P +Y
Sbjct: 517 FNDRASIENGVFVSIQAEPNF--TIPLADKHLDYQEDLTWTCEAF-GIPDVNY------- 566
Query: 221 WNSTWFNVSE-----HVIGKEVDRYTGRKEASIENVLVPWSTY-EFKVIAGNELGYGEPS 274
TWF ++ ++ DRY + L P S ++ A N+L S
Sbjct: 567 ---TWFRNGLPLNPFNLPPQDRDRYFVQDNILQIKRLNPLSDAGMYQCRASNQLKTKYSS 623
Query: 275 ------SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 328
S P + KP +A + G G+++I P + AP K W+
Sbjct: 624 AQLRVLSFKPSF---EKKPLEAETYAAEG----GNVTIVCNP-----EAAPRP--KFVWK 669
Query: 329 KKNDT--EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSA 386
K ND + E GN+ I+ V E YT A N+ G ++ + A
Sbjct: 670 KNNDILGSGGRRKILENGNLIISPVSRDDEGLYT-----CTASNNYGVDESRGLLIVLRA 724
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
M P + + + +N N EL+
Sbjct: 725 PKMTSTFPPQIITSVMENFTLNCEANTDELL 755
>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
Length = 1647
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/613 (64%), Positives = 497/613 (81%), Gaps = 10/613 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGGNVT+ C PEAAPKP F W+KD +G+GGRR+I NGNL+ISPVSRDD G Y C
Sbjct: 608 YAAEGGNVTLMCKPEAAPKPDFKWRKDKTTLGAGGRRRIV-NGNLIISPVSRDDEGTYVC 666
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
ATN +G DE++GRLIVL P + E+LP +I ++ ++N LRC + +E+LD+AYIW HN
Sbjct: 667 VATNEYGQDETRGRLIVLRAPYFIERLPTRIIMSYNQNQTLRCLGYADEMLDMAYIWKHN 726
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+RI N DL + P I++DG L+I NA+F + G+YECV+KS VG+IS+KT +IVEGPP
Sbjct: 727 GMRIRNKDL--MNNPRIHVDGEYLDIINATFVETGDYECVLKSAVGEISSKTILIVEGPP 784
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+ V+ V KTSATI+WTDGA NGR IT Y++ ART WN+TWF V E++ E+DRY
Sbjct: 785 GPPGGILVMNVAKTSATIRWTDGALNGRLITMYRVEARTKWNNTWFPVVENITAIEMDRY 844
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRKEA +ENVL P+S+YEF+V A NE GYG PSSPSP+++T ADKP +APS I GGGGK
Sbjct: 845 IGRKEAHLENVLNPYSSYEFRVSAFNEFGYGPPSSPSPRHSTLADKPTKAPSNISGGGGK 904
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W+PL QN P IYYKIFWR+K ++T+FQS +LKE+GN+G++VV + S++YY
Sbjct: 905 IGDLTITWDPLSPSDQNGPRIYYKIFWRRKGHETQFQSLSLKEFGNIGMSVVSVQSKYYY 964
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEYEVKVQAIND+G GP S++ T++SAEDMPQVAPQ V + +NST++NV+W+PIE RE
Sbjct: 965 TEYEVKVQAINDLGAGPISDIYTVYSAEDMPQVAPQLVVAMSYNSTSLNVSWSPIEQTRE 1024
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG+LIGHRIKYWK + PEE AVYYLSRTTR W+L+VGLQPDT Y+VKVMAYN+AGEGP
Sbjct: 1025 RVRGKLIGHRIKYWKNNFPEEGAVYYLSRTTRPWSLVVGLQPDTYYFVKVMAYNSAGEGP 1084
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
ESER+LERTYRKAPQKPPS+V++ G+NP+TV V WRYV PS EEEP+IGYK+RVW+ D+D
Sbjct: 1085 ESERFLERTYRKAPQKPPSSVNVYGVNPSTVRVVWRYVQPSLEEEPLIGYKIRVWDRDRD 1144
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
MS ANDTIIP G+ L+ADI +LSPGK Y++RVLAFSNGGDGRMSSP TFQMG+ + F+S
Sbjct: 1145 MSTANDTIIPGGSKLEADIKNLSPGKGYNLRVLAFSNGGDGRMSSPTHTFQMGDPEAFRS 1204
Query: 600 GSPALYSASTTLL 612
G A TT L
Sbjct: 1205 G------AGTTFL 1211
>gi|345481084|ref|XP_001605461.2| PREDICTED: contactin [Nasonia vitripennis]
Length = 937
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/618 (63%), Positives = 487/618 (78%), Gaps = 7/618 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGGNVT+ CNPEAAP+PKF WKKDGN++GSGGRR+I + G+L+ISPVSRDD G Y C
Sbjct: 315 YAAEGGNVTLICNPEAAPRPKFTWKKDGNVLGSGGRRRITDTGSLIISPVSRDDEGTYVC 374
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N +G DES+GRLIVL+GP E LPP I A + N LRC A+T+E+LDVAYIW HN
Sbjct: 375 QVSNEYGNDESRGRLIVLNGPVLIESLPPTIRTAVNLNQTLRCMAYTDEMLDVAYIWMHN 434
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+RI + DL P+I I+GG L+I NA+FA+AG+YEC+VKSTVG+IS++TT+ +EGPP
Sbjct: 435 DMRIRDKDLKA--NPHIVINGGQLDIINATFAEAGDYECIVKSTVGRISSRTTITIEGPP 492
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV-DR 239
G PGG+QV+ V KTS + WTDGA NGRPI Y I A+TNWN TWFN++E + DR
Sbjct: 493 GPPGGIQVLNVVKTSVDLSWTDGAYNGRPIDRYTISAKTNWNQTWFNLTEDFTAYTIGDR 552
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
TGRK A +ENVL P++TYEF++ AGNELGYG PS PSPQY+TP+DKP APS I GGGG
Sbjct: 553 NTGRKRAHLENVLRPFTTYEFRIQAGNELGYGPPSLPSPQYSTPSDKPIVAPSNIRGGGG 612
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
K+GDL+I W+PL +Q P I+YK++WR KK ++EFQS LKE+GNVG++VV I S++Y
Sbjct: 613 KLGDLTIKWDPLKSSEQYGPGIFYKVYWRRKKGESEFQSLALKEHGNVGMSVVPIQSQYY 672
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
YTEYEV VQA NDVG GP+SE+ TI+SAEDMPQVAPQ V + +N TA+NVTWNPIE R
Sbjct: 673 YTEYEVMVQAANDVGYGPKSEIFTIYSAEDMPQVAPQLVTAFSYNGTALNVTWNPIEQTR 732
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
E +RGRLIGHRIKYWKE+ EE AVYYLSRTTR W+L+VGLQPDT YYVKVMAYN+AGEG
Sbjct: 733 ERVRGRLIGHRIKYWKENGREEDAVYYLSRTTRPWSLVVGLQPDTYYYVKVMAYNSAGEG 792
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
PESERYL+RT+R+APQKPPS+V++ G NPT+V VTWRYV EEP+IG+K+RVWE DQ
Sbjct: 793 PESERYLQRTFRRAPQKPPSSVNVFGRNPTSVRVTWRYVQNPNGEEPVIGFKIRVWETDQ 852
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
DMS A DT++P + + A I +L GK Y +R+LA+SNGGDGRMSSPA F+MG+ ++
Sbjct: 853 DMSTAVDTLVP-PDAIVAIIENLGVGKEYFLRMLAYSNGGDGRMSSPAHRFRMGDATDY- 910
Query: 599 SGSPALYSASTTLLLVMS 616
G+ A ++LL++S
Sbjct: 911 -GNDASRRKLDSMLLIVS 927
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 85/219 (38%), Gaps = 31/219 (14%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDG---------NIIGSGGRRKIFENGNLLI-SPVSRDDSG 56
+VT+ C + P P + W K+ I R G L+I SP +D G
Sbjct: 212 DVTLSCLADGYPTPTYEWFKEDFENDRLVSKKIDPLSHNRYTISGGTLIIFSPNQTEDRG 271
Query: 57 IYSCTATNVHGMDESKGRLIVLH-------GPSYYEQ-LPPKITIAAHRNLQLRCSAHTE 108
Y C ATN G S+ + PS+ ++ L P+ A N+ L C+ E
Sbjct: 272 TYHCKATNKFGTIRSESVELXXXXXXXXXLKPSFKKRPLEPETYAAEGGNVTLICNP--E 329
Query: 109 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ W +G +G+ + D G L I+ S D G Y C V + G
Sbjct: 330 AAPRPKFTWKKDGNVLGSGGRRRI------TDTGSLIISPVSRDDEGTYVCQVSNEYGND 383
Query: 169 STKTTVIVEGPPGL-----PGGVQVVEVHKTSATIQWTD 202
++ +IV P L P V +++T + +TD
Sbjct: 384 ESRGRLIVLNGPVLIESLPPTIRTAVNLNQTLRCMAYTD 422
>gi|357617701|gb|EHJ70941.1| contactin [Danaus plexippus]
Length = 671
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/596 (63%), Positives = 470/596 (78%), Gaps = 5/596 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y EGGNVT+ CNPEAAPKP F WKKD +IG+GG+R I ENGNL+I +SRDD G+Y+C
Sbjct: 38 YGSEGGNVTLRCNPEAAPKPTFTWKKDNIVIGAGGKRFITENGNLIIRQLSRDDEGVYTC 97
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N +G DES+GRLIVL P + E+LPP+IT + + L C+A + +LD AY+W HN
Sbjct: 98 VAKNQYGTDESRGRLIVLRAPRFIERLPPRITTQVGQVIFLHCNAEIDSMLDTAYLWNHN 157
Query: 121 GVRIGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G+R+ DL I IDGG L I + S +D GEYEC+VKS +G+IST+T + +EGP
Sbjct: 158 GIRMKEAADL--YADKRIKIDGGELTIFDVSLSDVGEYECIVKSAIGRISTRTQLRIEGP 215
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-EVD 238
PG PGGVQV + ++S T++WTD NGRPIT+Y + RT WNSTWF +SE V E+D
Sbjct: 216 PGPPGGVQVSNIQQSSVTLEWTDSNPNGRPITNYVVTGRTQWNSTWFVLSESVTNVFEID 275
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
RY GRK A++ L+PWS YEF+V A N LG GEPSSPSPQ++T ADKPY +P IGGGG
Sbjct: 276 RYNGRKRATVTTTLMPWSVYEFRVQAVNSLGIGEPSSPSPQFSTQADKPYHSPFNIGGGG 335
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 357
GKIGDL+I W PLPR QN P IYYKIFWR+ N + EFQS +LKEYGN+G+ VV +P ++
Sbjct: 336 GKIGDLTIKWTPLPRSLQNGPGIYYKIFWRRNNTEVEFQSLSLKEYGNIGMHVVHVPLDY 395
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++T Y +KVQA ND+G GPESEVVTI+SAEDMPQVAPQ V+SR FNST++NVTWNPI+
Sbjct: 396 FFTPYNIKVQAFNDIGAGPESEVVTIYSAEDMPQVAPQQVYSRSFNSTSLNVTWNPIDQS 455
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
R+ +RG+LIGHR+KYWK+ N EE +YYLSRTTRNWALIVGLQPDT YYVKVMA+N+AGE
Sbjct: 456 RDRLRGKLIGHRLKYWKQANKEEECIYYLSRTTRNWALIVGLQPDTYYYVKVMAFNSAGE 515
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GPESERYLERTYRKAPQKPP++V++ +NP+TV V WRYV P+ EEEP+IGYKVRVWE+D
Sbjct: 516 GPESERYLERTYRKAPQKPPASVNVWAVNPSTVRVVWRYVQPTDEEEPLIGYKVRVWEID 575
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
QDMS ANDT++PV + L+A + L+PGK Y++RVLA+SNGGDGRMSSP ITFQMG+
Sbjct: 576 QDMSTANDTLVPVEHKLEAYVNSLTPGKSYNLRVLAYSNGGDGRMSSPPITFQMGD 631
>gi|195113137|ref|XP_002001125.1| GI10608 [Drosophila mojavensis]
gi|193917719|gb|EDW16586.1| GI10608 [Drosophila mojavensis]
Length = 1424
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/625 (59%), Positives = 459/625 (73%), Gaps = 6/625 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI CNPEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C
Sbjct: 800 YAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTC 859
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + + P +I H + L C A +ELLD+AY+W N
Sbjct: 860 IASNQAGTDESHARVIVLQEIRFVQTPPQRIVSREHDLIYLHCEAAFDELLDIAYVWKRN 919
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N + T I +D L + N + D+G+YECVV+S V +ISTKT VI+EG P
Sbjct: 920 GEILRN---DHDGTQRIIVDWNRLTVHNTTMRDSGDYECVVQSAVNEISTKTNVIIEGAP 976
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+E+ KT A I+W DG NGRPI +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 977 GAPGGVQVIEIGKTKAIIEWVDGVNNGRPIRYYNILGRTNWNRTWVNVSMHVQAREVDRY 1036
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS+YEF V A N+LG G PS+PSP Y+T D PY AP +GGGGGK
Sbjct: 1037 TSRQQAEVTN-LTPWSSYEFSVAAVNDLGIGTPSAPSPIYSTYDDVPYIAPRNVGGGGGK 1095
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ K N G+AVV IP YYT
Sbjct: 1096 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGALEWASDIRKNQENTGVAVVNIPLNNYYT 1155
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN +G GPESE V I+SAEDMPQVAPQ F+ +NST NV+W+PI++ REN
Sbjct: 1156 EYEVKVQAINSIGKGPESETVVIYSAEDMPQVAPQKPFALAYNSTCFNVSWSPIDMSREN 1215
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK ++ EE AVYYLSRTTR WALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1216 IRGKLIGHRLKYWKTEHQEEDAVYYLSRTTRPWALIVGLQPDTYYFVKVMAYNAAGEGPE 1275
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSP+ +EEP+ GYKVR+WE DQ+M
Sbjct: 1276 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPAQDEEPLAGYKVRIWETDQNM 1335
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
ANDTI+P+G+ L+A I L+PGK Y+MRVLAFSNGGDGRMSSP + FQMG K ++
Sbjct: 1336 ITANDTIVPIGSKLEAYINTLTPGKSYNMRVLAFSNGGDGRMSSPTLRFQMG--KTTRNA 1393
Query: 601 SPALYSASTTLLLVMSSTLYIFVAF 625
+ + + LVMS L+I +F
Sbjct: 1394 ANTRHGHNINTALVMSVLLFITTSF 1418
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C A P + W K+ + R I ++ L I + ++ D G+Y C
Sbjct: 707 NSDVTFICEAFAIPDANYTWYKNAERLDPLTINRDRYIIQDNVLTIKFLEKEKDEGMYQC 766
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + I A N + E + W +
Sbjct: 767 GAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCNPEAAPRPKFQWKKD 826
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G +G+ + + G L I+ S D G Y C+ + G + VIV
Sbjct: 827 GQLLGSGGHRRI------LPSGTLIISPTSRDDEGMYTCIASNQAGTDESHARVIV 876
>gi|195061304|ref|XP_001995968.1| GH14075 [Drosophila grimshawi]
gi|193891760|gb|EDV90626.1| GH14075 [Drosophila grimshawi]
Length = 1426
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/621 (58%), Positives = 461/621 (74%), Gaps = 6/621 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI CNPEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+YSC
Sbjct: 798 YAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYSC 857
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + + P +I H + L C A +ELLD+AY+W HN
Sbjct: 858 IASNQAGQDESHARVIVLQEIRFVQTPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHN 917
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N + T I +D L + N + DAG+YECVV+S V +I+TKT V++EG P
Sbjct: 918 GEILRN---DHDGTQRIIVDWNSLTVHNTTMRDAGDYECVVQSAVNEITTKTNVVIEGAP 974
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+E+ KT A I+W DG NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 975 GAPGGVQVIEIGKTKAIIEWVDGVNNGRQIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1034
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS+YEF V A N+LG G PS+PSP Y+T DKPY AP ++GGGGGK
Sbjct: 1035 TSRQQAEVTN-LTPWSSYEFSVTAVNDLGIGTPSTPSPIYSTYDDKPYIAPRKVGGGGGK 1093
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+WEPL ++Q++ I+YK+FW+ K E+ ++ +K+ NVG+AVV IP YYT
Sbjct: 1094 IGDLTITWEPLLPQEQHSHGIHYKVFWKLKGALEWATDVIKKQENVGVAVVNIPLNNYYT 1153
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN +G GPESE + I SAEDMPQVAPQ F+ +NST NV+W+PI++ REN
Sbjct: 1154 EYEVKVQAINSIGKGPESETIVIHSAEDMPQVAPQRPFALAYNSTCFNVSWSPIDMSREN 1213
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK ++ EE +VYYLSRTTR WALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1214 IRGKLIGHRLKYWKTEHQEEDSVYYLSRTTRPWALIVGLQPDTYYFVKVMAYNAAGEGPE 1273
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSP+ +EEPI GYKVR+WE DQ+M
Sbjct: 1274 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPAQDEEPIEGYKVRIWETDQNM 1333
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
AN+TI+P+G L++ I L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG K ++
Sbjct: 1334 ITANNTIVPIGQKLESFINTLTPGKSYNMRVLAYSNGGDGRMSSPTLRFQMG--KTTRNA 1391
Query: 601 SPALYSASTTLLLVMSSTLYI 621
+ ++ + L+MS L+I
Sbjct: 1392 ANTRHAHNINTALIMSVLLFI 1412
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C + P + W K+ + R + ++ L I + R+ D G+Y C
Sbjct: 705 NSDVTFICEAFSIPDANYTWYKNAERLDPLTINRDRYVIQDNVLTIKFLEREKDEGMYQC 764
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + I A N + E + W +
Sbjct: 765 GAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCNPEAAPRPKFQWKKD 824
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G +G+ + + G L I+ S D G Y C+ + G+ + VIV
Sbjct: 825 GQLLGSGGHRRI------LPSGTLIISPTSRDDEGMYSCIASNQAGQDESHARVIV 874
>gi|195451021|ref|XP_002072734.1| GK13528 [Drosophila willistoni]
gi|194168819|gb|EDW83720.1| GK13528 [Drosophila willistoni]
Length = 1425
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/622 (59%), Positives = 463/622 (74%), Gaps = 5/622 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C
Sbjct: 800 YAVFNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTC 859
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + + P +I H + L C A +ELLD+AY+W HN
Sbjct: 860 IASNQAGTDESHARVIVLQEIRFLQTPPQRIVSKEHDLIYLHCEAIYDELLDIAYVWKHN 919
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N + T I +D L + N + ADAG+YECVV+S V +IS KT V++EG P
Sbjct: 920 GEILKN---DHDGTTRIIVDWNSLTVHNTTMADAGDYECVVQSAVNEISAKTVVVIEGAP 976
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV ++ KT A I+W DGA NGRPI +Y I+ RTNWN TW NVS HV KE+DRY
Sbjct: 977 GAPGGVQVNQIAKTKAIIEWVDGANNGRPIRYYNILGRTNWNRTWTNVSTHVQAKEIDRY 1036
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS+YEF V A N+LG G PS+PSP Y+T DKPY P +GGGGGK
Sbjct: 1037 TMRQQAEVMN-LTPWSSYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYVPPRNVGGGGGK 1095
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ ++ + + NVG+AVV IP E YYT
Sbjct: 1096 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAKEWATDIIMKQENVGVAVVNIPRENYYT 1155
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKVQAIN+VG GPESE+VTI+SAEDMPQV+PQ F+ FNST NVTW PI++ RE+
Sbjct: 1156 QYDVKVQAINNVGKGPESEMVTIYSAEDMPQVSPQKPFALPFNSTCFNVTWQPIDMSREH 1215
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE AVYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1216 IRGKLIGHRLKYWKTTHQEEDAVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1275
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEPI GYKVR+WE DQ+M
Sbjct: 1276 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPIEGYKVRIWETDQNM 1335
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE-EKEFKS 599
AN+TI+P+G L++ I L+PGK Y+MRVLAFSNGGDGRMSSP + FQMG+ + +
Sbjct: 1336 ITANNTIVPIGQKLESYINTLTPGKSYNMRVLAFSNGGDGRMSSPTLRFQMGKTTRNSAT 1395
Query: 600 GSPALYSASTTLLLVMSSTLYI 621
Y+++ L+MS L++
Sbjct: 1396 LGGGHYTSNVNSALIMSLLLFL 1417
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C A P + W K+ + R + ++ L I + +D D G+Y C
Sbjct: 707 NSDVTFICEAFAIPDANYTWYKNAERLDPLTINRDRYVIQDNVLTIKFLEKDKDEGMYQC 766
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + I A N E + W +
Sbjct: 767 GAQNQLKTSFSSSQLRVLSMKPSFKKHPLEAEIYAVFNGNTTIVCDPEAAPRPKFQWKKD 826
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G +G+ + + G L I+ S D G Y C+ + G + VIV
Sbjct: 827 GQLLGSGGHRRI------LPSGTLIISPTSRDDEGMYTCIASNQAGTDESHARVIV 876
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 22/166 (13%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT +
Sbjct: 518 SIFCDPPQHYPAVRYYWARDYFPNFVEEDQRVFVSHDGALYFSFIETVDRANYSCTVQTL 577
Query: 66 HGMDESKGRLIVLHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAY 115
G L S Y+ L PK+ A +++L C A + +Y
Sbjct: 578 VSDTGRNGPFFSLRVTPNSNYQALIFANTFPKVFPEAPVAGEDIRLECMAFGYPI--PSY 635
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
WT G N+ N T G +L I NA+ D GEY C +
Sbjct: 636 NWTRQG---QNLQRNAYTTNY----GRVLIIQNATTNDNGEYTCTI 674
>gi|125777441|ref|XP_001359608.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
gi|54639356|gb|EAL28758.1| GA10588 [Drosophila pseudoobscura pseudoobscura]
Length = 1409
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/625 (59%), Positives = 460/625 (73%), Gaps = 7/625 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C
Sbjct: 788 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTC 847
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+A+N G DES R+IVL + + P +I H + L C A +ELLD+AY+W HN
Sbjct: 848 SASNQAGTDESHARVIVLQEIRFIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHN 907
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I ++ L + N + DAG+YECVVKS V +IS+KT+V++EG P
Sbjct: 908 GEILKN---NHDGTERIIVNWNRLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAP 964
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DGA NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 965 GAPGGVQVIQISKTKAIIEWVDGANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1024
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP ++GGGGGK
Sbjct: 1025 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGK 1083
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL E+Q++ I YK+FW+ K E+ ++ + + N+G+AVV IP YYT
Sbjct: 1084 IGDLTITWDPLLPEEQHSHGIRYKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYT 1142
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN +G GPESEV I SAEDMPQVAPQ F+ FNST NVTW+PI++ REN
Sbjct: 1143 EYEVKVQAINSIGKGPESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMSREN 1202
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1203 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1262
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEPI GYKVR+WE DQ+M
Sbjct: 1263 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPIEGYKVRIWETDQNM 1322
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
AN+TI+ VG L++ I L+PGK Y+MRVLAFSNGGDGRMSSP + FQMG K ++
Sbjct: 1323 ITANNTIVKVGQKLESYINTLTPGKSYNMRVLAFSNGGDGRMSSPTLRFQMG--KTTRNA 1380
Query: 601 SPALYSASTTLLLVMSSTLYIFVAF 625
+ + + L+MS L+I F
Sbjct: 1381 ANTRHGHNINTALIMSVLLFITTFF 1405
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C + P + W K+ + R + ++ L I + R+ D G+Y C
Sbjct: 695 NSDVTFICEAFSIPDANYTWYKNAERLDPLTINRDRYVIQDNVLTIKFLEREKDEGMYQC 754
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + I A N E + W +
Sbjct: 755 GAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKD 814
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G +G+ + + G L I+ S D G Y C + G + VIV
Sbjct: 815 GQLLGSGGHRRI------LPSGTLIISPTSRDDEGMYTCSASNQAGTDESHARVIV 864
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT +
Sbjct: 506 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTL 565
Query: 66 HGMDESKGRLIVLHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAY 115
G L S Y+ L PK+ A ++L C A + +Y
Sbjct: 566 VSDTGRNGPFFALRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYPI--PSY 623
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
WT G+ + T N G +L I NA+ D GEY C + +
Sbjct: 624 NWTRKGLPLQR----NAYTANY---GRVLIIQNATTNDNGEYSCTISN 664
>gi|195153264|ref|XP_002017549.1| GL21461 [Drosophila persimilis]
gi|194112606|gb|EDW34649.1| GL21461 [Drosophila persimilis]
Length = 1409
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/625 (59%), Positives = 460/625 (73%), Gaps = 7/625 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C
Sbjct: 788 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTC 847
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+A+N G DES R+IVL + + P +I H + L C A +ELLD+AY+W HN
Sbjct: 848 SASNQAGTDESHARVIVLQEIRFIQTPPQRIVSKEHDLIYLHCEAAYDELLDIAYVWKHN 907
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I ++ L + N + DAG+YECVVKS V +IS+KT+V++EG P
Sbjct: 908 GEILKN---NHDGTERIIVNWNRLTVHNTTMRDAGDYECVVKSAVNEISSKTSVVIEGAP 964
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DGA NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 965 GAPGGVQVIQISKTKAIIEWVDGANNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1024
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP ++GGGGGK
Sbjct: 1025 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRKVGGGGGK 1083
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL E+Q++ I YK+FW+ K E+ ++ + + N+G+AVV IP YYT
Sbjct: 1084 IGDLTITWDPLLPEEQHSHGIRYKVFWKLKGALEWATDEITK-QNMGVAVVNIPLNNYYT 1142
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN +G GPESEV I SAEDMPQVAPQ F+ FNST NVTW+PI++ REN
Sbjct: 1143 EYEVKVQAINSIGKGPESEVAIIHSAEDMPQVAPQKPFAMPFNSTCFNVTWSPIDMSREN 1202
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1203 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1262
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEPI GYKVR+WE DQ+M
Sbjct: 1263 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPIEGYKVRIWETDQNM 1322
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
AN+TI+ VG L++ I L+PGK Y+MRVLAFSNGGDGRMSSP + FQMG K ++
Sbjct: 1323 ITANNTIVKVGQKLESYINTLTPGKSYNMRVLAFSNGGDGRMSSPTLRFQMG--KTTRNA 1380
Query: 601 SPALYSASTTLLLVMSSTLYIFVAF 625
+ + + L+MS L+I F
Sbjct: 1381 ANTRHGHNINTALIMSVLLFITTFF 1405
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C + P + W K+ + R + ++ L I + R+ D G+Y C
Sbjct: 695 NSDVTFICEAFSIPDANYTWYKNAERLDPLTINRDRYVIQDNVLTIKFLEREKDEGMYQC 754
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + I A N E + W +
Sbjct: 755 GAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKD 814
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G +G+ + + G L I+ S D G Y C + G + VIV
Sbjct: 815 GQLLGSGGHRRI------LPSGTLIISPTSRDDEGMYTCSASNQAGTDESHARVIV 864
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT +
Sbjct: 506 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCTVQTL 565
Query: 66 HGMDESKGRLIVLHGP--SYYEQLP-----PKI---TIAAHRNLQLRCSAHTEELLDVAY 115
G L S Y+ L PK+ A ++L C A + +Y
Sbjct: 566 VSDTGRNGPFFALRVTPNSNYQALIFANTFPKVFPEAPVAGSEIRLECMAFGYPI--PSY 623
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
WT G+ + T N G +L I NA+ D GEY C + +
Sbjct: 624 NWTRKGLPLQR----NAYTANY---GRVLIIQNATTNDNGEYSCTISN 664
>gi|194743634|ref|XP_001954305.1| GF18209 [Drosophila ananassae]
gi|190627342|gb|EDV42866.1| GF18209 [Drosophila ananassae]
Length = 1404
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/625 (58%), Positives = 458/625 (73%), Gaps = 6/625 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI CNPEAAP+PKF WKKDG ++GSGG R+I +G L I+P SRDD GIY+C
Sbjct: 782 YAVYNGNTTIVCNPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLTIAPTSRDDEGIYTC 841
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
ATN G DES R+IVL + + P +I H + L C A +ELLD+AY+W HN
Sbjct: 842 IATNQAGTDESHARVIVLQEIRFIQTPPQRIVTKEHDLIYLHCEAAFDELLDIAYVWKHN 901
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N + T I ++ L + N + DAG+YECVVKS V +I++KT+V++EG P
Sbjct: 902 GEVLKN---DHDGTGRILVEWNSLTVHNTTMRDAGDYECVVKSAVNEINSKTSVVIEGAP 958
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGRPI +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 959 GAPGGVQVIQISKTKAIIEWVDGSNNGRPIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1018
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1019 TSRQQAEVTN-LTPWSAYEFSVTAVNDLGIGIPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1077
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ + G+AVV IP YYT
Sbjct: 1078 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGALEWASDEIKKQDHTGVAVVNIPLNNYYT 1137
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN +G GPES + I SAEDMPQVAPQ + FNST NVTW PI++ REN
Sbjct: 1138 EYEVKVQAINSIGKGPESPIAVIHSAEDMPQVAPQKPIALAFNSTCFNVTWQPIDMSREN 1197
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1198 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1257
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEPI GYKVR+WE DQ+M
Sbjct: 1258 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPIEGYKVRIWETDQNM 1317
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
AN+TI+P+G L++ I L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG K ++
Sbjct: 1318 ITANNTIVPIGEKLESYINTLTPGKSYNMRVLAYSNGGDGRMSSPTLRFQMG--KTTRNA 1375
Query: 601 SPALYSASTTLLLVMSSTLYIFVAF 625
+ + + L++S+ L+I F
Sbjct: 1376 ANTRHGHNINTALILSTLLFISTFF 1400
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 10/174 (5%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTA 62
+VT C A P + W K+ + + R I ++ L I + +D D G+Y C A
Sbjct: 691 DVTFICEAFAIPDANYTWYKNAERLDPLSINRDRYIIQDNVLTIKFLEKDKDEGMYQCGA 750
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N S +L VL +++ P + + A N + E + W +G
Sbjct: 751 QNQLKTSFSSAQLRVLSMKPSFKKHPLEAEVYAVYNGNTTIVCNPEAAPRPKFQWKKDGQ 810
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G+ + + G L I S D G Y C+ + G + VIV
Sbjct: 811 LLGSGGHRRI------LPSGTLTIAPTSRDDEGIYTCIATNQAGTDESHARVIV 858
>gi|194898472|ref|XP_001978813.1| GG12351 [Drosophila erecta]
gi|190650516|gb|EDV47771.1| GG12351 [Drosophila erecta]
Length = 1408
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/593 (60%), Positives = 446/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI CNPEAAP+PKF WKKDG +IGSGG R+I +G L+I+P SRDD GIY+C
Sbjct: 785 YAVYNGNTTIVCNPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLIIAPTSRDDEGIYTC 844
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 845 IASNQAGTDESHSRVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 904
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N + DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 905 GEVLKN---NHDGTGRIIVDWTRLTVHNTTMRDAGDYECVVKSAVNEISSKTSVSIEGAP 961
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 962 GAPGGVQVIQISKTKAIIEWVDGSNNGRVIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1021
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1022 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1080
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 1081 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 1140
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1141 EYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1200
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1201 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1260
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 1261 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWETDQNM 1320
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1321 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLRFQMGK 1373
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1139 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1197
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1198 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1250
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 1251 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 1308
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 1309 YKVRIWETDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLR 1368
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + + H IN
Sbjct: 1369 FQMGKTTRNGANTRHGHNIN 1388
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 10/176 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRD-DSGIYSC 60
+VT C A P + W K+ + R I ++ L I + +D D +Y C
Sbjct: 692 NSDVTFICEAFAIPDANYTWYKNAERLDPTTINRDRYIIQDNVLTIKFIEKDKDDAMYQC 751
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N S +L VL +++ P + + A N + E + W +
Sbjct: 752 GAQNQLKTSFSSAQLRVLSMKPSFKKHPLESEVYAVYNGNTTIVCNPEAAPRPKFQWKKD 811
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G IG+ + + G L I S D G Y C+ + G + + VIV
Sbjct: 812 GQVIGSGGHRRI------LPSGTLIIAPTSRDDEGIYTCIASNQAGTDESHSRVIV 861
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 503 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 559
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 560 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 617
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 618 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 659
>gi|20152017|gb|AAM11368.1| LD28757p [Drosophila melanogaster]
Length = 1036
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/593 (61%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L ISP SRDD GIY+C
Sbjct: 414 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTC 473
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 474 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 533
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 534 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 590
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 591 GAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 651 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 709
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 710 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 769
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 770 EYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 829
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 830 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 889
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 890 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNM 949
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 950 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGK 1002
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 768 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 826
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 827 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 879
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 880 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 937
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 938 YKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 997
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + + H IN
Sbjct: 998 FQMGKTTRNGANTRHGHNIN 1017
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 132 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 188
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 189 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 246
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 247 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 288
>gi|28571501|ref|NP_649461.2| contactin [Drosophila melanogaster]
gi|55976626|sp|Q9VN14.2|CONT_DROME RecName: Full=Contactin; Flags: Precursor
gi|28381126|gb|AAF52137.2| contactin [Drosophila melanogaster]
gi|33413906|gb|AAP44004.1| contactin [Drosophila melanogaster]
gi|60677949|gb|AAX33481.1| RE02061p [Drosophila melanogaster]
Length = 1390
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/593 (61%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L ISP SRDD GIY+C
Sbjct: 768 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTC 827
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 828 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 887
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 888 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 944
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 945 GAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1004
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1005 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1063
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 1064 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 1123
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1124 EYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1183
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1184 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNM 1303
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1304 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGK 1356
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 1234 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 1291
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 1292 YKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 1351
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + + H IN
Sbjct: 1352 FQMGKTTRNGANTRHGHNIN 1371
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 486 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 542
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 543 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 600
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 601 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
>gi|236752377|gb|ACQ91625.1| RT02589p [Drosophila melanogaster]
Length = 1354
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/593 (61%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L ISP SRDD GIY+C
Sbjct: 750 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTC 809
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 810 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 869
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 870 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 926
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 927 GAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 986
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 987 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1045
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 1046 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 1105
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1106 EYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1165
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1166 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1225
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 1226 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNM 1285
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1286 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGK 1338
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1104 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1162
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1163 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1215
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 1216 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 1273
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 1274 YKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 1333
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + + H IN
Sbjct: 1334 FQMGKTTRNGANTRHGHNIN 1353
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 468 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 524
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 525 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 582
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 583 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 624
>gi|183979292|dbj|BAG30765.1| contactin [Papilio xuthus]
Length = 1326
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/627 (58%), Positives = 478/627 (76%), Gaps = 12/627 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y EGGNVT+ CNPEAAPKP F WKKD +IG+GG+R I E GNL+I +SRDD G+Y+C
Sbjct: 695 YGSEGGNVTLKCNPEAAPKPTFTWKKDNIVIGAGGKRFITETGNLIIRQLSRDDEGVYTC 754
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N +G DES+GRLIVL P + E+LPP+IT + + L C+A + +LD AY+W HN
Sbjct: 755 VAKNQYGSDESRGRLIVLRTPRFLERLPPRITTQVGQVIFLHCNAEIDPILDTAYLWNHN 814
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+R+ + + + + IDGG L I + S +D G+YECVVKS +G+IS+ T + +EGPP
Sbjct: 815 GMRLKD-ESDMYADKRLKIDGGELTIFDVSLSDVGDYECVVKSAIGRISSHTQLRIEGPP 873
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVD 238
G PGG+Q++ + ++S T++WTD +NGRP+T Y + RT WN++W +S++ IG EVD
Sbjct: 874 GPPGGLQIMNIGRSSITLEWTDSNSNGRPVTSYVLTGRTQWNTSWTVISDN-IGNIIEVD 932
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
RY GRK A + L+P S YEF+V A N LG G+PS+PSPQ++T DKPYQAP+ +GGGG
Sbjct: 933 RYNGRKRAILNTALMPGSVYEFRVQAVNALGVGKPSAPSPQFSTLPDKPYQAPANVGGGG 992
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEF 357
GKIGDL+I+W PLP QN P I+YKIFWR+ + EFQS LKEYGNVG+ VV + +
Sbjct: 993 GKIGDLTITWTPLPPHLQNGPGIHYKIFWRRNGTEVEFQSLLLKEYGNVGMHVVHVSLNY 1052
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+YT Y VKVQA+N +G GPESE+ TI+SAEDMPQVAPQ V+SR FNSTA+NVTW+PI+
Sbjct: 1053 FYTPYNVKVQALNSLGAGPESEMATIYSAEDMPQVAPQQVYSRSFNSTALNVTWDPIDQS 1112
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
R+ +RGRLIGHR++YWK++N E+ +YYLSRTTRNWALIVGLQPDT YYVKVMA+N+AGE
Sbjct: 1113 RDRLRGRLIGHRLRYWKQENKEKECIYYLSRTTRNWALIVGLQPDTYYYVKVMAFNSAGE 1172
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GPESER+LERT+RKAPQKPP++V++ +NP+TV V WRYV P+ EEEP++GYKVRVWE+D
Sbjct: 1173 GPESERFLERTFRKAPQKPPASVNVWAVNPSTVRVVWRYVQPTDEEEPLLGYKVRVWEID 1232
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
QDMS ANDT++ V L+A +++L+PGK Y++RVLA+SNGGDGRMSSP ITFQMG+
Sbjct: 1233 QDMSTANDTLVAVEQKLEAYVMNLTPGKSYNLRVLAYSNGGDGRMSSPPITFQMGDYHSD 1292
Query: 598 KSG----SPALYSAS---TTLLLVMSS 617
G AL + S T LLL++ S
Sbjct: 1293 AYGYYVRDAALQNKSIPVTALLLLLFS 1319
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 12/183 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
G V + C P P + W +K+GNI R+ F N + L I V +D G Y C
Sbjct: 510 GQEVRLECVSFGYPVPSYNWTRKNGNI----PRKAHFSNFDRVLTIPNVGVEDEGEYVCD 565
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+ + L V P++ L K + +L C A + DV Y W NG
Sbjct: 566 VRSDRANIHNSVFLKVQAEPNFTIPLADK-HMDNKGDLHWNCEAFG--IPDVNYTWWKNG 622
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTV-GKISTKTTVIVEGP 179
V++ L + + I +L I A D G Y+C K+ + K ST ++
Sbjct: 623 VKLSMDTLEDEDRDRYIIQDNVLIIKFLDPARDPGMYQCEAKNQLKAKYSTGQLRVLSLK 682
Query: 180 PGL 182
P
Sbjct: 683 PSF 685
>gi|157114683|ref|XP_001652371.1| cell adhesion molecule [Aedes aegypti]
gi|108877190|gb|EAT41415.1| AAEL006958-PA [Aedes aegypti]
Length = 1303
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/592 (59%), Positives = 444/592 (75%), Gaps = 1/592 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y+ GN TI C PEAAP+PK VWKKDGN+IG+GG R++ G L ISP SRDD G+Y+C
Sbjct: 679 YSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGTGGHRRMLPTGTLFISPTSRDDEGVYTC 738
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G+ ESK RLIVL + EQLPPK+ L LRC +E+LDVA++W HN
Sbjct: 739 VASNSQGVAESKARLIVLQELRFTEQLPPKVIKQIDELLYLRCEVTYDEVLDVAFLWAHN 798
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G I D + LE+ N + DAGEYEC+ KS V +I +KT V ++GPP
Sbjct: 799 GRIINTYDNMPAYNARFIANYNSLEVHNLTLLDAGEYECIAKSAVNRIVSKTLVFIQGPP 858
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PG V+V+++ KT A+++W DG+ NGRPI +Y I+ RT WN TW NVS++V +E+DRY
Sbjct: 859 GAPGAVKVIDIKKTDASLEWIDGSDNGRPILYYNILGRTTWNKTWVNVSQNVFAQEIDRY 918
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GR+ A++ N L P YEF V+A N+LG G PS PSP YNT DKPY AP +GGGGGK
Sbjct: 919 NGRRRATVTN-LTPGCGYEFSVVAVNDLGIGVPSLPSPLYNTQKDKPYIAPRNVGGGGGK 977
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL E+QN+ +I+YK+F+R N E+ SE LK GNVG AVV IP + YYT
Sbjct: 978 IGDLTITWDPLLPEEQNSIDIHYKVFYRLPNQREWASEVLKRQGNVGRAVVHIPFDKYYT 1037
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+YEVKVQAIND+G GP S++ TI+SAEDMPQVAPQ +R +NSTA+NVTW P+ R+
Sbjct: 1038 KYEVKVQAINDLGEGPISDIATIYSAEDMPQVAPQQTVARSYNSTALNVTWIPVSQTRDA 1097
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK+++ EE AVY+LSRTTR WALIVGL+PDT Y+VKVMAYN AGEGPE
Sbjct: 1098 IRGKLIGHRLKYWKKEHKEEDAVYFLSRTTRPWALIVGLEPDTYYFVKVMAYNAAGEGPE 1157
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SERYLERTYR APQKPPS+V+I GINP+T+ V WRY++PS +EEP+ GYK+R+WE DQDM
Sbjct: 1158 SERYLERTYRNAPQKPPSSVNIFGINPSTIRVVWRYIAPSQDEEPVQGYKIRIWETDQDM 1217
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ ANDT++P+G L+ I +L+PGK Y++RVLA+SNGGDGRMSSP I FQMG
Sbjct: 1218 TTANDTVVPIGQKLEKIIDNLTPGKSYNLRVLAYSNGGDGRMSSPPIKFQMG 1269
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 144/612 (23%), Positives = 234/612 (38%), Gaps = 78/612 (12%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLL----ISPVSRDDSGI 57
+VT C A P + W K+ ++ R+ K N+L + P DD+G+
Sbjct: 585 SSVTFLCEASAIPDVNYTWYKNAELMDPENRKFNKDKFVIQDNVLKINFLDP--EDDNGM 642
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C ATN S +L VL +++ P + I + N E +W
Sbjct: 643 YQCKATNQLKGVYSSAQLRVLSMKPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKIVW 702
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV- 176
+G IG + + G L I+ S D G Y CV ++ G +K +IV
Sbjct: 703 KKDGNVIGTGGHRRM------LPTGTLFISPTSRDDEGVYTCVASNSQGVAESKARLIVL 756
Query: 177 ---EGPPGLPGGV--QVVEVHKTSATIQWTD-------GATNGRPITHYKIIARTNWNST 224
LP V Q+ E+ + + + A NGR I Y + N
Sbjct: 757 QELRFTEQLPPKVIKQIDELLYLRCEVTYDEVLDVAFLWAHNGRIINTYDNMPAYN---- 812
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
R+ + + L E++ IA + + + P
Sbjct: 813 -------------ARFIANYNSLEVHNLTLLDAGEYECIAKSAVNRIVSKTLVFIQGPPG 859
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF--------WRKKNDTEFQ 336
AP + K D S+ W + P +YY I W + F
Sbjct: 860 -----APGAVKVIDIKKTDASLEW--IDGSDNGRPILYYNILGRTTWNKTWVNVSQNVFA 912
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQ 395
E + G V + Y E V A+ND+G G S +++ + D P +AP+
Sbjct: 913 QEIDRYNGRRRATVTNLTPGCGY---EFSVVAVNDLGIGVPSLPSPLYNTQKDKPYIAPR 969
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW+P L+ E I +++ +++ N E A L R
Sbjct: 970 NVGGGGGKIGDLTITWDP--LLPEEQNSIDIHYKV-FYRLPNQREWASEVLKRQGNVGRA 1026
Query: 456 IVGLQPD---TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+V + D TKY VKV A N+ GEGP S+ + PQ P + N T ++V
Sbjct: 1027 VVHIPFDKYYTKYEVKVQAINDLGEGPISDIATIYSAEDMPQVAPQQTVARSYNSTALNV 1086
Query: 513 TWRYVSPSFE--EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD--ADIVDLSPGKRYH 568
TW VS + + +IG++++ W+ + + D + + T A IV L P Y
Sbjct: 1087 TWIPVSQTRDAIRGKLIGHRLKYWKKEH---KEEDAVYFLSRTTRPWALIVGLEPDTYYF 1143
Query: 569 MRVLAFSNGGDG 580
++V+A++ G+G
Sbjct: 1144 VKVMAYNAAGEG 1155
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 102/247 (41%), Gaps = 31/247 (12%)
Query: 9 TIFCNP-EAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+++C+P + P ++ W +D N + R + +G+L S + D YSC NV
Sbjct: 395 SLYCDPPQHYPDVRYYWSRDFFPNFVEEDQRVFVSHDGSLYFSSLEIKDRANYSC---NV 451
Query: 66 HGMDESKGR------LIVLHGPSYYE-----QLPPKITIA--AHRNLQLRCSAHTEELLD 112
GR L V+ P Y + P K A A ++L+L C A +
Sbjct: 452 QSTVSDTGRNGPFFNLQVVAHPHYQDLIFANNFPKKFPEAPVAGKDLRLECMAFGYPV-- 509
Query: 113 VAYIWTHNGVRIGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+Y WT R GN+ + LE N +L I N++ D GEY C +K+ IS
Sbjct: 510 PSYNWTR---RNGNLPRFSYLENYN-----RVLVIKNSTANDNGEYICTIKNDRKSISKS 561
Query: 172 TTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
V V+ P ++ ++ +++S T A T YK + + FN +
Sbjct: 562 VLVSVQMQPNFTIPLKDKIKDYQSSVTFLCEASAIPDVNYTWYKNAELMDPENRKFNKDK 621
Query: 231 HVIGKEV 237
VI V
Sbjct: 622 FVIQDNV 628
>gi|195497051|ref|XP_002095937.1| GE25412 [Drosophila yakuba]
gi|194182038|gb|EDW95649.1| GE25412 [Drosophila yakuba]
Length = 1390
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/593 (60%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L I+P SRDD GIY+C
Sbjct: 768 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTC 827
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 828 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 887
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I ID L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 888 GEILKN---NHDGTGRIIIDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 944
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 945 GAPGGVQVIQISKTKAIIEWVDGSNNGRAIRYYNILGRTNWNRTWVNVSTHVKAREVDRY 1004
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1005 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPKNVGGGGGK 1063
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +++ ++G+AVV IP YYT
Sbjct: 1064 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIRKQDHMGVAVVNIPLNNYYT 1123
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1124 EYEVKVQAINSVGKGPESEITVIHSAEDMPQVAPQKPIALAYNSTCFNVTWKPIDMSREN 1183
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1184 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWETDQNM 1303
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1304 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLRFQMGK 1356
>gi|195343401|ref|XP_002038286.1| GM10750 [Drosophila sechellia]
gi|194133307|gb|EDW54823.1| GM10750 [Drosophila sechellia]
Length = 1390
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/593 (60%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L I+P SRDD GIY+C
Sbjct: 768 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTC 827
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 828 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 887
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 888 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 944
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 945 GAPGGVQVIQISKTKAIIEWVDGSNNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1004
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1005 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1063
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 1064 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 1123
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN+VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1124 EYEVKVQAINNVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1183
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1184 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE D +M
Sbjct: 1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDHNM 1303
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1304 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGK 1356
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINNVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 1234 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 1291
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D+ TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 1292 YKVRIWESDHNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 1351
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + H IN
Sbjct: 1352 FQMGKTTRNGADTRHGHNIN 1371
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 486 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 542
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 543 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 600
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 601 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
>gi|347962989|ref|XP_311153.3| AGAP000007-PA [Anopheles gambiae str. PEST]
gi|333467411|gb|EAA06433.3| AGAP000007-PA [Anopheles gambiae str. PEST]
Length = 1332
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/633 (57%), Positives = 459/633 (72%), Gaps = 14/633 (2%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y+ GN TI C PEAAP PK VWKKDGN+IGSGG RKI+ G L ISP SRDD G Y+C
Sbjct: 701 YSIANGNTTIRCEPEAAPTPKIVWKKDGNVIGSGGHRKIYPTGTLHISPTSRDDEGTYTC 760
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N GM ESK RLIVL + EQLPPK L LRC ++LLDVA++WTHN
Sbjct: 761 IASNTQGMAESKARLIVLQELRFTEQLPPKQIKQIGEMLFLRCDVTYDQLLDVAFVWTHN 820
Query: 121 G-VRIGNMDLNEL-----------ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G + G+ D +E + I I LE+ N + D GEYECV KS+V +I
Sbjct: 821 GQLLTGHDDADEQRLRQQPIGPAPDGARIRIHYNTLEVHNLTLVDGGEYECVAKSSVNRI 880
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
++ TV+++GPPG PG V+V+++ KT A ++WT+G NGRPI +Y I+ RTNWN TW NV
Sbjct: 881 VSRATVLIQGPPGAPGAVKVIDIKKTEALLEWTNGNDNGRPILYYNILGRTNWNRTWVNV 940
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
S HV+ +E DRY GR++A++ N L PW YE +A N+LG G PS PSP Y+T D+PY
Sbjct: 941 STHVVAQEADRYNGRRQATVTN-LTPWCGYEI-CVAVNDLGLGTPSLPSPMYSTLKDRPY 998
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
AP +GGGGGKIGDL+I+W+PL +QN+ +++Y++F+R E+ SE L+ GNVG
Sbjct: 999 IAPRNVGGGGGKIGDLTITWDPLAPHEQNSIDVHYRVFYRLHGQREWASEELQRQGNVGK 1058
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
AV+ +P++ YYT YEVKVQA+ND+G GP SE V IFSAEDMPQVAPQ +R FNSTA+N
Sbjct: 1059 AVIHVPTDKYYTRYEVKVQAVNDLGVGPISEPVEIFSAEDMPQVAPQQTIARSFNSTALN 1118
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
VTW P+ RE IRG+LIGHR+KYWK+++ EE +VYYLSRTTR WALIVGL+PDT Y+VK
Sbjct: 1119 VTWVPVSQTRETIRGKLIGHRLKYWKKEHNEEDSVYYLSRTTRPWALIVGLEPDTYYFVK 1178
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
VMAYN AGEGPESERYLERTYRKAPQKPPS+V I GINP+T+ VTWRY++PS +EEP+ G
Sbjct: 1179 VMAYNAAGEGPESERYLERTYRKAPQKPPSSVQIYGINPSTIKVTWRYIAPSQDEEPVQG 1238
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
YK+R+WE DQDMS ANDT++ VG L+ I +L+PGK Y++RVLAFSNGGDGRMSSP I
Sbjct: 1239 YKIRIWEKDQDMSSANDTVVLVGRKLEKYIDNLTPGKSYNLRVLAFSNGGDGRMSSPPIQ 1298
Query: 589 FQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
FQMG + + + +L TL+ ++ + L +
Sbjct: 1299 FQMGITQSPLNDATSLSVPFFTLVTLLCALLCL 1331
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 24/184 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNII----GSGG----RRKIFENGNLL----ISPVSRDD 54
+V+ C A P + W K+G ++ +GG R K NLL + P +D
Sbjct: 604 SVSFLCEAYAMPDVNYTWYKNGELMEEDSATGGGRLNRDKYTIQDNLLKINYLDP--EED 661
Query: 55 SGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQ-LPPKITIAAHRNLQLRCSAHTEELLD 112
+G+Y C ATN S +L VL PS+ ++ L +I A+ N +RC
Sbjct: 662 NGMYQCKATNQLKGVYSAAQLRVLSMKPSFKKRPLESEIYSIANGNTTIRCEPEAAPTPK 721
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ +W +G IG+ ++ G L I+ S D G Y C+ +T G +K
Sbjct: 722 I--VWKKDGNVIGSGGHRKI------YPTGTLHISPTSRDDEGTYTCIASNTQGMAESKA 773
Query: 173 TVIV 176
+IV
Sbjct: 774 RLIV 777
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 25/191 (13%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P+ P KF W ++ N + R + +G+L S + D YSCT
Sbjct: 411 GKALVCEEPQHYPDVKFYWSRNYFPNFVYEDQRVFVSHDGSLYFSSLEVMDRANYSCTVM 470
Query: 64 NVHGMDESKGRLIVLH-GPS-YYEQLP---------PKITIAAHRNLQLRCSAHTEELLD 112
+ G L PS +Y+ L PK+ +A ++++L C + +
Sbjct: 471 STVSDTGRNGPFFELSVSPSPHYQDLIFANTFPKAFPKVPLAG-KDVRLECMTYGYPV-- 527
Query: 113 VAYIWTHNGVRIGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+Y WT R GN+ L+ LE N +L I NA+ D GEY C ++ I+
Sbjct: 528 ASYNWTR---RNGNLPRLSRLENYN-----RVLLIQNATVNDNGEYVCTARNGKKSITQS 579
Query: 172 TTVIVEGPPGL 182
+ V+ P
Sbjct: 580 IFLNVQMEPNF 590
>gi|195390941|ref|XP_002054125.1| GJ22962 [Drosophila virilis]
gi|194152211|gb|EDW67645.1| GJ22962 [Drosophila virilis]
Length = 1421
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/625 (58%), Positives = 456/625 (72%), Gaps = 6/625 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG ++GSGG R+I +G L+ISP SRDD G+Y+C
Sbjct: 797 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQLLGSGGHRRILPSGTLIISPTSRDDEGMYTC 856
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + ++ P +I H + L C A +ELLD+AY+W HN
Sbjct: 857 VASNQAGSDESHARVIVLQEIRFVQRPPQRIVSREHDLIYLHCEAAYDELLDIAYVWKHN 916
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N + D+G+YECVVKS V +IST T VI+EG P
Sbjct: 917 GEVLRN---NHDGTERIIVDWNSLTVHNTTMRDSGDYECVVKSAVNEISTTTNVIIEGAP 973
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+E+ KT A I+W DG NGRPI +Y I+ RTNWN TW NVS +EVDRY
Sbjct: 974 GAPGGVQVIEIGKTKAIIEWVDGVNNGRPIRYYHILGRTNWNRTWTNVSMFQHAREVDRY 1033
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++ + + L PWS+YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1034 TSRQQTEVGD-LTPWSSYEFSVTAVNDLGIGAPSAPSPIYSTYDDKPYIAPRNVGGGGGK 1092
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K ++ S+ +K+ NVG+AVV IP YYT
Sbjct: 1093 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGALDWASDIIKKQENVGVAVVNIPLNNYYT 1152
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEV+VQAIN VGPGP S+ V I SAEDMPQVAPQ F+ +NST NV+W+PI++ REN
Sbjct: 1153 EYEVRVQAINSVGPGPISDTVVIHSAEDMPQVAPQKPFALAYNSTCFNVSWSPIDMSREN 1212
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE AVYYLSRTTR WALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1213 IRGKLIGHRLKYWKTTHQEEDAVYYLSRTTRPWALIVGLQPDTYYFVKVMAYNAAGEGPE 1272
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSP+ +EEPI GYKVR+WE DQ+M
Sbjct: 1273 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPAQDEEPIEGYKVRIWETDQNM 1332
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
AN+TI+P+G L+ I L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG K ++
Sbjct: 1333 ITANNTIVPIGQKLEVFINTLTPGKSYNMRVLAYSNGGDGRMSSPTLRFQMG--KTTRNA 1390
Query: 601 SPALYSASTTLLLVMSSTLYIFVAF 625
+ + + L+MS L+I F
Sbjct: 1391 ANTRHGHNINTALIMSVLLFITTFF 1415
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 10/174 (5%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTA 62
+VT C A P + W K+G + + R + ++ L I + +D D G+Y C A
Sbjct: 706 DVTFICEAFAIPDANYTWYKNGERLDPLSINRDRYVIQDNLLTIKFLEKDKDEGMYQCGA 765
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N S +L VL +++ P + I A N E + W +G
Sbjct: 766 QNQLKTSYSSAQLRVLSMKPSFKKRPLESEIYAVYNGNTTIVCDPEAAPRPKFQWKKDGQ 825
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G+ + + G L I+ S D G Y CV + G + VIV
Sbjct: 826 LLGSGGHRRI------LPSGTLIISPTSRDDEGMYTCVASNQAGSDESHARVIV 873
>gi|170066102|ref|XP_001868120.1| contactin [Culex quinquefasciatus]
gi|167862726|gb|EDS26109.1| contactin [Culex quinquefasciatus]
Length = 977
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/592 (58%), Positives = 437/592 (73%), Gaps = 1/592 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y+ GN TI C PEAAP+PK VWKKDGN+IGSGG RKI G L ISP SRDD G+Y+C
Sbjct: 386 YSIYNGNTTIECEPEAAPRPKIVWKKDGNVIGSGGHRKILPVGTLYISPTSRDDEGVYTC 445
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G+ ESK RLIVL + EQLPPK+ L LRC +E+LDVA++W HN
Sbjct: 446 VASNTQGVAESKARLIVLQELRFIEQLPPKLIKQIDEMLYLRCDVSYDEVLDVAFLWAHN 505
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G I + D ++ LE+ N + D+GEYEC+VKS V ++ +KT V V+GPP
Sbjct: 506 GRLINSDDDVFRNNSRFFVNNNHLEVHNLTLLDSGEYECIVKSAVNQVVSKTNVFVQGPP 565
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PG ++V+++ KT A ++W DG+ NGR I Y I+ RT WN TW N+SE+V+ +E+DRY
Sbjct: 566 GAPGAIKVIDIKKTDAVLEWIDGSDNGRQIMFYNILGRTTWNKTWVNISENVVAQEIDRY 625
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GRK A + N L P YEF V+A N+LG G PS PSP YNT DKPY P IGGGGGK
Sbjct: 626 NGRKRAVVNN-LTPGCGYEFSVMAVNDLGGGTPSLPSPLYNTQKDKPYLFPKNIGGGGGK 684
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W PL E+QN+ +I+YK+F+R EF ++ LK GN G AVV IPS+ YYT
Sbjct: 685 IGDLTITWTPLLPEEQNSIDIHYKVFYRLLGQKEFATDVLKNRGNTGKAVVHIPSDKYYT 744
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+YEVKVQAIND+G GP S++ I+SAEDMPQVAPQ +R FNSTA+NV+W + RE
Sbjct: 745 KYEVKVQAINDLGDGPVSDIAVIYSAEDMPQVAPQQTIARSFNSTALNVSWVSVPQTRET 804
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG++IGHR+KYWK+++ EE AVYYLSR+ +WALIVGL+PDT Y+VK M YN AGEGPE
Sbjct: 805 IRGKMIGHRLKYWKKEHKEEDAVYYLSRSINSWALIVGLEPDTYYFVKCMIYNGAGEGPE 864
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SERYLERTYR APQKPPS+V+I GINP+T+ V WRY++PS +EEP+ GYK+R+WE DQDM
Sbjct: 865 SERYLERTYRSAPQKPPSSVNIFGINPSTIRVVWRYIAPSQDEEPVQGYKIRIWETDQDM 924
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ ANDT++P+GN L+ I +L+PGK Y++RVLA+SNGGDGRMSSP + FQMG
Sbjct: 925 TTANDTVVPIGNKLEKYIDNLTPGKSYNLRVLAYSNGGDGRMSSPPLKFQMG 976
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 140/613 (22%), Positives = 240/613 (39%), Gaps = 80/613 (13%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVS-RDDSGIYS 59
+VT C A P + W K+ ++ + I ++ L I+ + +D+G+Y
Sbjct: 292 SSVTFLCEATAIPDVNYTWYKNAQLMDPESSKFNKDKYIIQDNILKINFLDPEEDNGMYQ 351
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N S +L VL +++ P + I + N E +W
Sbjct: 352 CKASNQLKGVYSSAQLRVLSMKPSFKKKPLESEIYSIYNGNTTIECEPEAAPRPKIVWKK 411
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV--- 176
+G IG+ ++ + G L I+ S D G Y CV +T G +K +IV
Sbjct: 412 DGNVIGSGGHRKI------LPVGTLYISPTSRDDEGVYTCVASNTQGVAESKARLIVLQE 465
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTD-------GATNGRPITHYKIIARTNWNST 224
+ PP L Q+ E+ + + + A NGR I + R NS
Sbjct: 466 LRFIEQLPPKLIK--QIDEMLYLRCDVSYDEVLDVAFLWAHNGRLINSDDDVFRN--NSR 521
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
+F + H+ EV T E ++ S V N G P
Sbjct: 522 FFVNNNHL---EVHNLTLLDSGEYECIVK--SAVNQVVSKTNVFVQGPPG---------- 566
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF----WRKK--NDTE-FQS 337
AP I K D + W + ++Y I W K N +E +
Sbjct: 567 -----APGAIKVIDIKKTDAVLEW--IDGSDNGRQIMFYNILGRTTWNKTWVNISENVVA 619
Query: 338 ETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAP 394
+ + Y AVV P YE V A+ND+G G S +++ + D P + P
Sbjct: 620 QEIDRYNGRKRAVVNNLTPG----CGYEFSVMAVNDLGGGTPSLPSPLYNTQKDKPYLFP 675
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ + G + +TW P L+ E I +++ +++ +E A L
Sbjct: 676 KNIGGGGGKIGDLTITWTP--LLPEEQNSIDIHYKV-FYRLLGQKEFATDVLKNRGNTGK 732
Query: 455 LIVGLQPD---TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+V + D TKY VKV A N+ G+GP S+ + + PQ P + N T ++
Sbjct: 733 AVVHIPSDKYYTKYEVKVQAINDLGDGPVSDIAVIYSAEDMPQVAPQQTIARSFNSTALN 792
Query: 512 VTWRYVSPSFE--EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD--ADIVDLSPGKRY 567
V+W V + E +IG++++ W+ + + D + + +++ A IV L P Y
Sbjct: 793 VSWVSVPQTRETIRGKMIGHRLKYWKKEH---KEEDAVYYLSRSINSWALIVGLEPDTYY 849
Query: 568 HMRVLAFSNGGDG 580
++ + ++ G+G
Sbjct: 850 FVKCMIYNGAGEG 862
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 31/247 (12%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+++C+P + P ++ W + N + R + +G+L S + D YSC NV
Sbjct: 102 SLYCDPPQHYPDVRYYWSRTYFPNFVEEDQRVFVSHDGSLYFSSLEIKDRANYSC---NV 158
Query: 66 HGMDESKGR------LIVLHGPSY----YEQLPPKI---TIAAHRNLQLRCSAHTEELLD 112
GR L V+ P Y + PKI A ++++L C A +
Sbjct: 159 QSTVSDTGRNGPFFNLQVVSHPHYQDLIFANTFPKIYPEAPVAGKDVRLECMAFGYPV-- 216
Query: 113 VAYIWTHNGVRIGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+Y WT + GN+ LE+ N +L I N++ D GEY C +K+ +S
Sbjct: 217 PSYNWTR---KSGNLPRQSYLESYN-----RVLVIRNSTANDNGEYTCTIKNDRKFLSKS 268
Query: 172 TTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
V ++ P ++ ++ ++S T A T YK + S+ FN +
Sbjct: 269 ILVNIQMEPNFTIPLKDKLKDFQSSVTFLCEATAIPDVNYTWYKNAQLMDPESSKFNKDK 328
Query: 231 HVIGKEV 237
++I +
Sbjct: 329 YIIQDNI 335
>gi|312383176|gb|EFR28362.1| hypothetical protein AND_03853 [Anopheles darlingi]
Length = 895
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/576 (57%), Positives = 426/576 (73%), Gaps = 13/576 (2%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y+ GN TI C PEAAP PK VWKKDG++IGSGG RKI+ G L ISP SRDD G Y+C
Sbjct: 239 YSIANGNTTIVCEPEAAPTPKIVWKKDGSVIGSGGHRKIYPTGTLFISPTSRDDEGTYTC 298
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N GM ESK RLIVL + EQLP K+ L LRC ++LLDVA+IWTHN
Sbjct: 299 IASNNQGMAESKARLIVLQELRFTEQLPSKLIKQIGEMLYLRCDVTYDQLLDVAFIWTHN 358
Query: 121 GV------------RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G R N+ + ++ I I LE+ N + D GEYEC+ KS+V +I
Sbjct: 359 GQVLNVDNPEDERRRTANLGPAQWDSARIRIHYNNLEVHNLTLVDGGEYECIAKSSVNRI 418
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+K+ V+++GPPG PG V+V+++ KT A ++WT+G NGRPI +Y I+ RTNWN TW N+
Sbjct: 419 VSKSQVLIQGPPGAPGAVKVIDIKKTEAMLEWTNGNENGRPILYYNILGRTNWNRTWVNI 478
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++HVI +EVDRY GR+ A++ N L PW YEF V+A N+LG G PS PSP Y+T DKPY
Sbjct: 479 TQHVIAQEVDRYNGRRRATVGN-LTPWCGYEFSVVAVNDLGIGAPSLPSPVYSTQKDKPY 537
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
AP +GGGGGKIGDL+I+W+PL ++QN+ I+YK+F+R E+ SE LK GN+G
Sbjct: 538 IAPRNVGGGGGKIGDLTITWDPLLPQEQNSIEIHYKVFYRLHGQREWASEELKRQGNMGK 597
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
AV+ + ++ YYT+YEVKVQAIND+G GP SE VTI+SAEDMPQVAPQ +R FNSTA+N
Sbjct: 598 AVIHVATDKYYTKYEVKVQAINDLGMGPISEPVTIYSAEDMPQVAPQQTIARSFNSTALN 657
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
VTW P+ RE+IRG+LIGHR+KYWK+++ EE +VYYLSRTTR WALIVGL+PDT Y+VK
Sbjct: 658 VTWVPVSQNRESIRGKLIGHRLKYWKKEHKEEDSVYYLSRTTRPWALIVGLEPDTYYFVK 717
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
VMAYN AGEGPESERYLERTYRKAPQKPPS+V I+GINP+T+ V WRY++PS +EEP+ G
Sbjct: 718 VMAYNAAGEGPESERYLERTYRKAPQKPPSSVTIEGINPSTIQVEWRYIAPSQDEEPVQG 777
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564
YK+R+WE+DQDMS ANDT++P+G L+ I +L+P
Sbjct: 778 YKIRIWEIDQDMSSANDTVVPIGKKLEKRIDNLTPA 813
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 14/227 (6%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
YE V A+ND+G G S ++S + D P +AP+ V G + +TW+P+ +N
Sbjct: 507 YEFSVVAVNDLGIGAPSLPSPVYSTQKDKPYIAPRNVGGGGGKIGDLTITWDPLLPQEQN 566
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD---TKYYVKVMAYNNAGE 477
+ H +++ E A L R ++ + D TKY VKV A N+ G
Sbjct: 567 ---SIEIHYKVFYRLHGQREWASEELKRQGNMGKAVIHVATDKYYTKYEVKVQAINDLGM 623
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE--EEPIIGYKVRVWE 535
GP SE + PQ P + N T ++VTW VS + E +IG++++ W+
Sbjct: 624 GPISEPVTIYSAEDMPQVAPQQTIARSFNSTALNVTWVPVSQNRESIRGKLIGHRLKYWK 683
Query: 536 VDQDMSRANDTIIPVGNTLD--ADIVDLSPGKRYHMRVLAFSNGGDG 580
+ + D++ + T A IV L P Y ++V+A++ G+G
Sbjct: 684 KEH---KEEDSVYYLSRTTRPWALIVGLEPDTYYFVKVMAYNAAGEG 727
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNII-----GSGGRRKIFENGNLL----ISPVSRDDSG 56
+VT C A P + W K+G ++ G R K NLL + P + D G
Sbjct: 144 SSVTFLCEAFAIPDVNYTWYKNGELMDDREGGKFNRDKYTIQDNLLKINFLEPET--DDG 201
Query: 57 IYSCTATN-VHGMDESKGRLIVLHGPSYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVA 114
+Y C ATN + G+ S ++ PS+ ++ L +I A+ N + C +
Sbjct: 202 MYQCKATNQLKGVYSSAQLRVLSMKPSFKKRPLESEIYSIANGNTTIVCEPEAAPTPKI- 260
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
+W +G IG+ ++ G L I+ S D G Y C+ + G +K +
Sbjct: 261 -VWKKDGSVIGSGGHRKI------YPTGTLFISPTSRDDEGTYTCIASNNQGMAESKARL 313
Query: 175 IV 176
IV
Sbjct: 314 IV 315
>gi|321454618|gb|EFX65782.1| hypothetical protein DAPPUDRAFT_303516 [Daphnia pulex]
Length = 1134
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/642 (53%), Positives = 456/642 (71%), Gaps = 19/642 (2%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA +GGNVTI CNPEAAP+PK+VW+KDG IGSGGRR I +G+LLI+PVS +D G ++C
Sbjct: 489 YAADGGNVTIACNPEAAPRPKYVWRKDGFAIGSGGRRIILPSGHLLINPVSMEDVGNFTC 548
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TA N G D S GR+IVL GP + EQ P +I + QLRC A E +LD+AYIW HN
Sbjct: 549 TAENRFGSDSSTGRVIVLRGPVFVEQPPNRILTTVGQTEQLRCRASAEGILDLAYIWKHN 608
Query: 121 GVRI----GNMDLNE-LETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G+ + +D ++ LE + I G LEI N + AGEYECV K++VG+ISTKT +
Sbjct: 609 GITLRFDSSPVDFHDNLEAAHYIRSREGSLEINNITLGQAGEYECVAKTSVGRISTKTHL 668
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
V GPPG GGVQV+E+ +SA ++WTDGATNG PI Y + RTNWN TW ++ ++
Sbjct: 669 FVYGPPGAVGGVQVLELTSSSAVLRWTDGATNGDPIRLYMVEGRTNWNQTWSVLAMNITA 728
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
K+VDR T RKEA + N + P+STYEF++ A N LGYG S PSPQYNT D+ +Q P+ +
Sbjct: 729 KDVDRLTSRKEAQLINTVSPYSTYEFRISAANTLGYGPSSIPSPQYNTRPDRIFQPPTNV 788
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--------KNDTEFQSETLKEYGNV 346
GGGGGK GDL+I+W P ++QNA YYK+FWR+ ++E+QS+ +K +
Sbjct: 789 GGGGGKTGDLTITWTPFVGQQQNASGTYYKVFWRRLAGVDADVTEESEYQSQIVKHSRSA 848
Query: 347 GIAVVRIPS--EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
G+ V + +YYT Y+VKVQ NDVG G ES V+I+SAED+PQVAP V +R FNS
Sbjct: 849 GLFVATVDRNRRYYYTPYKVKVQGCNDVGCGQESPEVSIYSAEDVPQVAPNQVAARAFNS 908
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
T++NVTW P++L R+ +RG +IG RIKYW+ + E+ +V+YLSR+TRN ALIVGL PDT
Sbjct: 909 TSLNVTWLPMDLSRKQMRGNMIGFRIKYWRRQDKEDASVFYLSRSTRNEALIVGLMPDTY 968
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y+V+VMAYN AGEGP+SER+LERT++KAP KPP+ V + +NP+TV VTWRYV+PS EEE
Sbjct: 969 YWVRVMAYNGAGEGPQSERFLERTFKKAPLKPPTTVQVVAVNPSTVRVTWRYVAPSIEEE 1028
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
P+IGYKVRVWE DQDMS ANDT++P+G L+A + LS GKRY++RVLA+S GGDG+MSS
Sbjct: 1029 PLIGYKVRVWESDQDMSTANDTLVPLGRKLEAYVTGLSWGKRYNLRVLAYSQGGDGKMSS 1088
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAFS 626
P F+MG++ + S ++ L+L+ S L I F+
Sbjct: 1089 PTWVFRMGDDSDVNS---SVQMNVAILVLLASVILSICQTFT 1127
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 14/187 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG----SGGRRKIFE--NGNLLISPVSRD- 53
+ G ++ C P ++W ++G ++ G R+ FE L+I + D
Sbjct: 389 HMDRGEDLLWTCEAFGIPDVNYLWLRNGQVLDPLSLEQGDRERFEIRENVLIIRKLDPDR 448
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D +Y C A+N S G+L +L + + P + I A + + + E
Sbjct: 449 DQAMYQCKASNQIAERYSSGQLRILDIKPSFAKKPLESDIYAADGGNVTIACNPEAAPRP 508
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
Y+W +G IG+ I + G L I S D G + C ++ G S+
Sbjct: 509 KYVWRKDGFAIGSGGR------RIILPSGHLLINPVSMEDVGNFTCTAENRFGSDSSTGR 562
Query: 174 VIV-EGP 179
VIV GP
Sbjct: 563 VIVLRGP 569
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 36/191 (18%)
Query: 10 IFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
I+C+P + P ++ W +D N + R + +GNL S + D G YSC NV
Sbjct: 205 IYCDPPQYFPDIQYYWVRDVFPNFVEEDSRTFVSFDGNLYFSSLENIDRGRYSC---NVQ 261
Query: 67 GMDESKGRLIVLHGPSY---------YEQLP-----PKITIAAHR---NLQLRCSAHTEE 109
S GR +GP + Y+QL PK A R +++L C A
Sbjct: 262 STVSSNGR----NGPFFSVEVRQHPNYQQLKFPNNFPKSFPEAPRVGEDVRLECVAFGYP 317
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + Y WT G + + N N +L + D GEY C + I
Sbjct: 318 VPN--YNWTRKGAPLP----KGVVITNYN---RILVLPKVKVEDMGEYVCRATNDKVSIE 368
Query: 170 TKTTVIVEGPP 180
TV V+ P
Sbjct: 369 GSVTVSVQATP 379
>gi|427788459|gb|JAA59681.1| Putative contactin 5 [Rhipicephalus pulchellus]
Length = 1216
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 296/616 (48%), Positives = 395/616 (64%), Gaps = 14/616 (2%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GN+TI C PEAAP P+F W+K+G GGR ++ NG L I PV R+D G Y+C
Sbjct: 593 YAAEEGNITIPCRPEAAPYPEFTWRKNGYTFALGGRTQMLSNGYLRIDPVRREDEGNYTC 652
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N +G S G L+VL P E PPK+ +L C A +LD++YIW HN
Sbjct: 653 VVKNQYGTASSTGALVVLSLPRSVEAPPPKVVATVGSLEELHCHALAPHMLDLSYIWLHN 712
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+RI +E + G L I N SFA+AG Y C+ K++VGK+ T ++V GPP
Sbjct: 713 DLRI---HPHEWPQYGVGYRPGYLVIYNVSFAEAGHYTCIAKTSVGKVFANTELLVLGPP 769
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW---FNVSEHVIGKEV 237
G PG V + TS I+W DG ++G IT Y I RTN N+TW NV+ K+
Sbjct: 770 GQPGAVLGHSFNATSGFIEWADGTSHGSHITSYAIEGRTNHNATWRELLNVTYAPPSKQ- 828
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+GR+E + NVL PWS YEF+V A N LG G+PS PSPQYNT D+PY AP +GGG
Sbjct: 829 HHASGRREVELGNVLSPWSKYEFRVTAANILGVGQPSDPSPQYNTAVDRPYIAPRNVGGG 888
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
GGK G L+I+W PL E+ N+P ++Y++++R D +E + + L++ GNVG+ VV + E
Sbjct: 889 GGKAGSLTITWTPLSPEEWNSPEVWYRVYYRPSGDRSEPRKKDLRKLGNVGLYVVPVGEE 948
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y++ YEV+VQA+N VG GP SE ++SAE MPQV P GV++ NSTA+NVTWNP+++
Sbjct: 949 NYFSPYEVQVQAVNVVGEGPISEPEIVYSAEGMPQVQPSGVYAVPHNSTALNVTWNPLDI 1008
Query: 417 IRENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
RE IRGRLIGHRIKYW+ D + E ++ L R NW LIVGLQP+T+Y V VMAYN A
Sbjct: 1009 TREKIRGRLIGHRIKYWRSDLDRELDSLILLKRGIENWGLIVGLQPNTEYRVAVMAYNEA 1068
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPESE ++ +T++ AP +PP++V + ++PT+V VTWR V PS EEE I GYKVR WE
Sbjct: 1069 GSGPESEFFVAKTFKAAPLRPPTSVKVHALSPTSVRVTWRGVVPSIEEESIQGYKVRYWE 1128
Query: 536 VDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
DQD++ A + + G L+A + L PGK Y +RVLA+S GGDG+MSSP F++G+
Sbjct: 1129 ADQDLTSAKEVYKQLDGEDLEAVVSGLVPGKVYKLRVLAWSFGGDGKMSSPPWEFRVGD- 1187
Query: 595 KEFKSGSPALYSASTT 610
+ SP AS T
Sbjct: 1188 ---GAASPYRSKASIT 1200
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 13/185 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS------GGRRKIFENGNLLISPVSRDDS 55
A EG +T C P+ + W ++G + + R K+ +N L+I ++R D
Sbjct: 496 ADEGSRLTWTCEAFGIPEVVYHWYRNGEKLNTESSDDMRARYKVDDN-ILVIEDINRADE 554
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G+Y C+ATN G S +L V+ + + P + A + E +
Sbjct: 555 GMYQCSATNSLGTSFSTAQLRVVTMAPNFAKYPLDTEMYAAEEGNITIPCRPEAAPYPEF 614
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W NG ++ + G L I D G Y CVVK+ G S+ ++
Sbjct: 615 TWRKNGYTFALGGRTQM------LSNGYLRIDPVRREDEGNYTCVVKNQYGTASSTGALV 668
Query: 176 VEGPP 180
V P
Sbjct: 669 VLSLP 673
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTAT 63
G +V + C P PK+ W + G + +G +I +G +L+ P R +D G Y C A+
Sbjct: 410 GNDVRLECIAYGYPVPKYNWTRVGGPMPAGA--QISSHGRVLLLPRVRVEDLGEYVCIAS 467
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
L + P + L ++ R L C A + +V Y W NG +
Sbjct: 468 ADQDSIRKGVTLTIQAMPEFTIPLEHQVADEGSR-LTWTCEAFG--IPEVVYHWYRNGEK 524
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGPPGL 182
+ +++ +D +L I + + AD G Y+C +++G ST +V P
Sbjct: 525 LNTESSDDMRA-RYKVDDNILVIEDINRADEGMYQCSATNSLGTSFSTAQLRVVTMAPNF 583
>gi|391347544|ref|XP_003748020.1| PREDICTED: contactin-like [Metaseiulus occidentalis]
Length = 1223
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 292/632 (46%), Positives = 405/632 (64%), Gaps = 22/632 (3%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIY 58
YA E GN+TI C PEAAP P+F+WKKDG +G+ GGR I NG L I+PV +D G Y
Sbjct: 590 YAAEEGNLTISCRPEAAPFPEFLWKKDGYNVGTSGGGRVYIMPNGFLRINPVRIEDEGNY 649
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C A N++G D S GRLIVL P Y+ PP+++ + + L C A LLD++Y WT
Sbjct: 650 TCIAKNIYGQDMSSGRLIVLPPPIAYQSPPPRLSAVVNDTVTLLCEAKASPLLDLSYTWT 709
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
HN ++I ET + G L I N +FA+AG Y+C+ K+++G++ +T +IV G
Sbjct: 710 HNDLKIDWRRSPLYETKYSMPEAGNLVIYNVTFAEAGFYKCIAKTSIGRVEMRTELIVIG 769
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG G ++ ++TSA + WTD ATNGR Y I RTN N TW ++ + G D
Sbjct: 770 PPGPVGAIKAENANETSALLSWTDSATNGRHFLGYLIEGRTNHNHTWRLIANYTTG---D 826
Query: 239 RYTGRKEASIENV----------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
R+ R EA L P+S YEF++ A N+LG GE S PSP T D+PY
Sbjct: 827 RF--RLEAPFRAARRAYQLPRWSLSPYSGYEFRIAAYNDLGIGEFSEPSPVVTTQEDRPY 884
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVG 347
AP+ +GGGGGK G L+++WE L E NAP ++Y ++WR ++ EF + LKEYGNVG
Sbjct: 885 NAPNNVGGGGGKAGSLTVTWEQLHTEDWNAPQVWYIVYWRPASEKGEFNKQNLKEYGNVG 944
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ VV + E Y+ Y V VQA+N G GP S V ++SAE P+V P GV++ +NSTA+
Sbjct: 945 LHVVNVGEENYFRPYTVMVQAMNYKGAGPTSREVEVYSAEARPEVQPTGVYAHAYNSTAL 1004
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
NVTW P+++ RE IRGRLIGHRIKYW+ + + E + L+R RNWAL+VGLQP+T+Y
Sbjct: 1005 NVTWTPLDVTREKIRGRLIGHRIKYWRSNADAEVDFLVLLNRGLRNWALVVGLQPNTEYR 1064
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
V VMAYN+AG GPESE ++++T++ AP +PP++V ++ I+ T+V VTWR V PS EEE I
Sbjct: 1065 VAVMAYNDAGSGPESEYFIQKTWKAAPLRPPTSVKVRPISDTSVKVTWRGVVPSIEEESI 1124
Query: 527 IGYKVRVWEVDQDMSRANDT--IIPVGNT-LDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
GY +R WE DQD ++A + I+ + ++ LD + DL PGK Y +RVLA+S GGDG+MS
Sbjct: 1125 QGYMIRYWEADQDYTQAREVRRILDIHSSELDGIVSDLVPGKVYKLRVLAYSLGGDGKMS 1184
Query: 584 SPAITFQMGEEKEFKSGSPALYSASTTLLLVM 615
SP F++G+ + S +L S+ L L+
Sbjct: 1185 SPPWEFRLGDGVQSSLTSSSLKFVSSILTLLF 1216
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 6/125 (4%)
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
+Y C A N G S +L V+ + + P + + A L S E ++
Sbjct: 553 MYQCMARNQIGSAFSSAQLKVISLMPNFWKYPLETELYAAEEGNLTISCRPEAAPFPEFL 612
Query: 117 WTHNGVRIGNMDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W +G +G + PN G L I D G Y C+ K+ G+ + +I
Sbjct: 613 WKKDGYNVGTSGGGRVYIMPN-----GFLRINPVRIEDEGNYTCIAKNIYGQDMSSGRLI 667
Query: 176 VEGPP 180
V PP
Sbjct: 668 VLPPP 672
>gi|270015155|gb|EFA11603.1| hypothetical protein TcasGA2_TC013632 [Tribolium castaneum]
Length = 1180
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/484 (57%), Positives = 358/484 (73%), Gaps = 12/484 (2%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGG+VTI CNPEAAP+P+FVWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C
Sbjct: 660 YAAEGGSVTIKCNPEAAPRPEFVWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTC 719
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G+DESKGRLIVL GP E L PKI R LRC A TEE+LD+AY+W+HN
Sbjct: 720 RASNQFGVDESKGRLIVLRGPRLIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHN 779
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G++I ++D+ + + IDGG L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEGPP
Sbjct: 780 GIKIRDIDIKNMNY-RLRIDGGFLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEGPP 838
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G G V + K+S T+QWTDGAT+G I Y + RTNWN TW N+S V +E+DRY
Sbjct: 839 GP-PGGVTVSIQKSSFTLQWTDGATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRY 897
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
TG+KE+ I+ L PWSTYEF++ A N G G PS+PSP+++TP D+PY AP IGGGGGK
Sbjct: 898 TGQKESLIDTALTPWSTYEFRIAAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGK 957
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W PL ++QN P IYY+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YY
Sbjct: 958 IGDLTITWSPLKPDEQNGPGIYYRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYY 1017
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY VKVQAIN +GPGP S I+SAEDMPQVAPQ V +R FNSTA+NV+W PI+ RE
Sbjct: 1018 TEYIVKVQAINQIGPGPISPEHVIYSAEDMPQVAPQLVVARSFNSTALNVSWVPIDQTRE 1077
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-----ALIVGLQPDTKYYVKVMAYNN 474
+RG+LIGHRI+ W+ D TA + T + + A + LQP Y ++V+AY+N
Sbjct: 1078 KVRGKLIGHRIRVWEFDQDISTA----NDTIKPFGGKLEAYVNNLQPGKTYRMRVLAYSN 1133
Query: 475 AGEG 478
G+G
Sbjct: 1134 GGDG 1137
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 8/263 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++ YE ++ A N G GP S S D P +AP + G + +TW+P++
Sbjct: 912 WSTYEFRIAAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPD 971
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD---TKYYVKVMAYNN 474
+N G I +RI + ++D E L +V + P T+Y VKV A N
Sbjct: 972 EQN--GPGIYYRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQ 1029
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE--PIIGYKVR 532
G GP S ++ + PQ P V + N T ++V+W + + E+ +IG+++R
Sbjct: 1030 IGPGPISPEHVIYSAEDMPQVAPQLVVARSFNSTALNVSWVPIDQTREKVRGKLIGHRIR 1089
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
VWE DQD+S ANDTI P G L+A + +L PGK Y MRVLA+SNGGDGRMSSP + F+MG
Sbjct: 1090 VWEFDQDISTANDTIKPFGGKLEAYVNNLQPGKTYRMRVLAYSNGGDGRMSSPEVKFRMG 1149
Query: 593 EEKEFKSGSPALYSASTTLLLVM 615
++S L + T+++
Sbjct: 1150 PLAYYRSACEDLKPFTITIVIAC 1172
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSG-----GRRKIFENGNLL-ISPVSRD-DSGIYSCTATN 64
C P + W K+G + G R +I N+L I + ++ D G+Y C ATN
Sbjct: 571 CEAFGIPDVNYTWWKNGRQLVMGYMEPEERDRIRIQDNVLTIRYLDQERDPGMYQCRATN 630
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
S +L VL +++ P + A + + E ++W +G +
Sbjct: 631 SLKTKYSSAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEFVWKKDGNVL 690
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
G+ + ++ G L I++ S D G+Y C + G +K +IV P L
Sbjct: 691 GSGGHRRI------LENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPRL 742
>gi|91082585|ref|XP_967335.1| PREDICTED: similar to cell adhesion molecule [Tribolium castaneum]
Length = 1192
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/500 (55%), Positives = 353/500 (70%), Gaps = 24/500 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA EGG+VTI CNPEAAP+P+FVWKKDGN++GSGG R+I ENGNL+IS VSRDD G Y+C
Sbjct: 652 YAAEGGSVTIKCNPEAAPRPEFVWKKDGNVLGSGGHRRILENGNLVISSVSRDDEGQYTC 711
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G+DESKGRLIVL GP E L PKI R LRC A TEE+LD+AY+W+HN
Sbjct: 712 RASNQFGVDESKGRLIVLRGPRLIESLTPKIVTTVGRYFDLRCLAETEEMLDIAYVWSHN 771
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G++I ++D+ + + IDGG L +TNA+F DAGEYEC +KSTVGKIS+++ V+VEGPP
Sbjct: 772 GIKIRDIDIKNMNY-RLRIDGGFLSVTNATFTDAGEYECTIKSTVGKISSRSVVVVEGPP 830
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G G V + K+S T+QWTDGAT+G I Y + RTNWN TW N+S V +E+DRY
Sbjct: 831 GP-PGGVTVSIQKSSFTLQWTDGATHGSQIRGYTVSGRTNWNQTWVNISYIVDVREIDRY 889
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
TG+KE+ I+ L PWSTYEF++ A N G G PS+PSP+++TP D+PY AP IGGGGGK
Sbjct: 890 TGQKESLIDTALTPWSTYEFRIAAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGK 949
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYY 359
IGDL+I+W PL ++QN P IYY+IFW++K+ + EFQ++ LKE+GN G+AVV IP ++YY
Sbjct: 950 IGDLTITWSPLKPDEQNGPGIYYRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYY 1009
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY VKVQAIN +GPGP S I+SAEDMPQVAPQ V +R FNSTA+NV+W PI+ RE
Sbjct: 1010 TEYIVKVQAINQIGPGPISPEHVIYSAEDMPQVAPQLVVARSFNSTALNVSWVPIDQTRE 1069
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---------------------ALIVG 458
+RG+LIGHR+ W+ P R W A +
Sbjct: 1070 KVRGKLIGHRVMVWRYVQPSLEEEPLKGYKIRVWEFDQDISTANDTIKPFGGKLEAYVNN 1129
Query: 459 LQPDTKYYVKVMAYNNAGEG 478
LQP Y ++V+AY+N G+G
Sbjct: 1130 LQPGKTYRMRVLAYSNGGDG 1149
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 143/283 (50%), Gaps = 28/283 (9%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++ YE ++ A N G GP S S D P +AP + G + +TW+P++
Sbjct: 904 WSTYEFRIAAWNSWGMGPPSAPSPRHSTPPDRPYIAPYNIGGGGGKIGDLTITWSPLKPD 963
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD---TKYYVKVMAYNN 474
+N G I +RI + ++D E L +V + P T+Y VKV A N
Sbjct: 964 EQN--GPGIYYRIFWKRKDQEVEFQTQELKEFGNTGMAVVHIPPQYYYTEYIVKVQAINQ 1021
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW-------------------- 514
G GP S ++ + PQ P V + N T ++V+W
Sbjct: 1022 IGPGPISPEHVIYSAEDMPQVAPQLVVARSFNSTALNVSWVPIDQTREKVRGKLIGHRVM 1081
Query: 515 --RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
RYV PS EEEP+ GYK+RVWE DQD+S ANDTI P G L+A + +L PGK Y MRVL
Sbjct: 1082 VWRYVQPSLEEEPLKGYKIRVWEFDQDISTANDTIKPFGGKLEAYVNNLQPGKTYRMRVL 1141
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVM 615
A+SNGGDGRMSSP + F+MG ++S L + T+++
Sbjct: 1142 AYSNGGDGRMSSPEVKFRMGPLAYYRSACEDLKPFTITIVIAC 1184
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P + W K+G + R +I +N + D G+Y C ATN S
Sbjct: 571 CEAFGIPDVNYTWWKNGRQL-ERDRIRIQDNVLTIRYLDQERDPGMYQCRATNSLKTKYS 629
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
+L VL +++ P + A + + E ++W +G +G+
Sbjct: 630 SAQLRVLAFRPTFKKHPLEAETYAAEGGSVTIKCNPEAAPRPEFVWKKDGNVLGSGGHRR 689
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
+ ++ G L I++ S D G+Y C + G +K +IV P L
Sbjct: 690 I------LENGNLVISSVSRDDEGQYTCRASNQFGVDESKGRLIVLRGPRL 734
>gi|241114451|ref|XP_002400195.1| Contactin-5, putative [Ixodes scapularis]
gi|215493066|gb|EEC02707.1| Contactin-5, putative [Ixodes scapularis]
Length = 1185
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 267/620 (43%), Positives = 365/620 (58%), Gaps = 31/620 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA E GNVTI C PEAAP P+F W++DG + +GGR ++ NG L I PV R+D G Y+C
Sbjct: 569 YAAEEGNVTIACRPEAAPFPEFTWRRDGYAVPTGGRLQVLNNGFLRIHPVRREDEGNYTC 628
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TA N +G S GRLIVL P E PP++ +L C A +LD++YIW HN
Sbjct: 629 TAKNQYGTATSGGRLIVLPPPRSLEAPPPRLQAHVGGTEELMCQAIAPHMLDLSYIWLHN 688
Query: 121 GVRIGNMDLNE--------LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+R+ D + + T + + G L I N +FA+AG Y C+ K++VGK+ T
Sbjct: 689 DLRLHPQDWPQYGVVSFFWIRTNLLALGPGYLVIYNVTFAEAGRYTCIAKTSVGKVLANT 748
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
++V GPPG PG V + TS I+W DG +GRPIT Y I RTN N TW +
Sbjct: 749 ELLVIGPPGPPGAVLGSNFNATSGFIEWADGTNHGRPITSYAIEGRTNHNGTWRELINIT 808
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
E GR+ + VL PWS YEF+VIAGN+LG G+PS PSPQYNT D PY AP
Sbjct: 809 YAAERRMTPGRRGVELGPVLSPWSKYEFRVIAGNDLGVGQPSDPSPQYNTALDAPYVAPR 868
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVV 351
+GGGGGK G L+I+WE L E+ N+P I+Y++++R K D +E + + L+ GNVG+ VV
Sbjct: 869 NVGGGGGKAGSLTITWERLSPEEWNSPEIWYQVYYRPKGDRSEPRKKNLRNLGNVGLYVV 928
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ--GVFSRGFNSTAINV 409
+ E YY YEV ++ PE +++ + + ++ + V F T
Sbjct: 929 PVGEENYYFPYEVGGDGLHR---RPECRILSPSTRNNCYNISFKFHFVLCLFFAPTTSQS 985
Query: 410 TWNPIELIRENIRG--------RLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQ 460
N ++ +R I R +IKYWK D NPE ++ L R NW LIVGLQ
Sbjct: 986 LGNNVQAVRSQISRKQPKCSCFRFAVPQIKYWKSDSNPELDSLVLLKRGIENWGLIVGLQ 1045
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P+T+Y V VMAYN+AG GPESE ++ +T++ AP +PP++V ++ + T+V VTWR V PS
Sbjct: 1046 PNTEYRVAVMAYNDAGSGPESEFFVAKTFKAAPLRPPTSVKVRAHSDTSVKVTWRGVLPS 1105
Query: 521 FEEEPI-------IGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVL 572
EEE I +GYKVR WE DQD++ A + + G L+A + L PGK Y +RVL
Sbjct: 1106 IEEESIQACPGTWLGYKVRYWEADQDLTSAKEVYNALDGEDLEAIVTGLVPGKVYKLRVL 1165
Query: 573 AFSNGGDGRMSSPAITFQMG 592
A+S GGDG+MSSP F++G
Sbjct: 1166 AWSYGGDGKMSSPPWEFRVG 1185
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 141/398 (35%), Gaps = 74/398 (18%)
Query: 50 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
V ++D G+Y C ATN G S +L ++ +E+ P + A + + E
Sbjct: 525 VRKEDEGMYQCCATNTLGSTYSSAQLRIVTMAPNFEKYPLESETYAAEEGNVTIACRPEA 584
Query: 110 LLDVAYIWTHNGVRI---GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ W +G + G + + ++ G L I D G Y C K+ G
Sbjct: 585 APFPEFTWRRDGYAVPTGGRLQV---------LNNGFLRIHPVRREDEGNYTCTAKNQYG 635
Query: 167 KISTKTTVIVEGPP-----------GLPGG-----VQVVEVHKTSATIQWTDGATNGRPI 210
++ +IV PP GG Q + H + W P
Sbjct: 636 TATSGGRLIVLPPPRSLEAPPPRLQAHVGGTEELMCQAIAPHMLDLSYIWLHNDLRLHPQ 695
Query: 211 T--HYKIIA----RTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 262
Y +++ RTN + + V +V E RYT + S+ KV
Sbjct: 696 DWPQYGVVSFFWIRTNLLALGPGYLVIYNVTFAEAGRYTCIAKTSVG-----------KV 744
Query: 263 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 322
+A EL P P P + G I W P
Sbjct: 745 LANTELLVIGPPGP--------------PGAVLGSNFNATSGFIEWA--DGTNHGRPITS 788
Query: 323 YKI--------FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
Y I WR+ + + +E G G+ + + S +++YE +V A ND+G
Sbjct: 789 YAIEGRTNHNGTWRELINITYAAERRMTPGRRGVELGPVLSP--WSKYEFRVIAGNDLGV 846
Query: 375 GPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTW 411
G S+ + +A D P VAP+ V G + ++ +TW
Sbjct: 847 GQPSDPSPQYNTALDAPYVAPRNVGGGGGKAGSLTITW 884
>gi|195568169|ref|XP_002102090.1| GD19724 [Drosophila simulans]
gi|194198017|gb|EDX11593.1| GD19724 [Drosophila simulans]
Length = 282
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/247 (71%), Positives = 208/247 (84%)
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
G+AVV IP YYTEYEVKVQAIN+VG GPESE+ I SAEDMPQVAPQ + +NST
Sbjct: 2 GVAVVNIPLNNYYTEYEVKVQAINNVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTC 61
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
NVTW PI++ RENIRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+
Sbjct: 62 FNVTWQPIDMSRENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYF 121
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
VKVMAYN AGEGPESER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+
Sbjct: 122 VKVMAYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPV 181
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
GYKVR+WE DQ+M AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP
Sbjct: 182 EGYKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPT 241
Query: 587 ITFQMGE 593
+ FQMG+
Sbjct: 242 LHFQMGK 248
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 14 YTEYEVKVQAINNVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 72
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 73 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 125
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 126 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 183
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 184 YKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 243
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + H IN
Sbjct: 244 FQMGKTTRNGADTRHGHNIN 263
>gi|269785101|ref|NP_001161506.1| contactin-like protein precursor [Saccoglossus kowalevskii]
gi|268053975|gb|ACY92474.1| axonin [Saccoglossus kowalevskii]
Length = 1048
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 217/611 (35%), Positives = 327/611 (53%), Gaps = 28/611 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYS 59
A GN+TI CNPEAAPKP F W + I +GG I +NG+L I V D G Y+
Sbjct: 441 AARNGNITIECNPEAAPKPDFTWLHNNRPISITNGGHYTILDNGHLFIQNVQDSDGGKYT 500
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D+S+GRL++ G + Q P ++I + L+C A + +LD+ YIW
Sbjct: 501 CIARNYIGEDQSEGRLVIRDG-TVITQWPLAMSIEVGDDATLKCRATADPVLDLTYIWLL 559
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+GV+I +D ++ + G LEI +A +G Y C +T+ ++S VI++G
Sbjct: 560 DGVQIDVLD----DSHYARLRDGNLEIIDAELRQSGVYTCTAHTTIDEVSKSAEVIIKGA 615
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P GV+ ++ S ++W++G +N PI Y + +RT W ++R
Sbjct: 616 PGPPAGVRASDITTNSCQLRWSEGFSNNDPIKTYTVQSRTKEEPEWI----------IER 665
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
++ N L PWS Y+F+V A N G GEPS PSP+Y+T DKPY P +GGGGG
Sbjct: 666 EGIPDLSASLNSLSPWSNYQFRVSAVNSYGRGEPSLPSPEYSTHEDKPYHEPRNVGGGGG 725
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEFY 358
K GDL I+W+PL R+ QNAP + Y ++W+K N E S+ + VG+ V+ +P+
Sbjct: 726 KTGDLRITWDPLSRQDQNAPGLGYYVYWKKANSREEYSKGVVNDEAVGVYTVKGVPT--- 782
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y +Y+V+V N G GP S + TI+S E P AP V + + + I VTW+ I
Sbjct: 783 YVQYDVRVGVFNAKGDGPNSTISTIYSHESAPSEAPDNVEAEATSGSTIKVTWDSIST-- 840
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
N++G+L G+++KYW D+ E TA + I L T Y +KV+AY+ G G
Sbjct: 841 NNLKGKLRGYKLKYWSSDDSEATASTVSTPGVTTRYEIQNLDYSTVYNIKVLAYSGGGNG 900
Query: 479 PESERYLE-RTYRKAPQKPPSAVHIKGINPTTVHVTW-RYVSPSFEEEPIIGYKVRVWEV 536
P S+ + T + APQ P V + +++ VTW + S + EEEP+ GYK+ ++ +
Sbjct: 901 PASDNVVRVTTLKSAPQDAPENVKAAVSSWSSILVTWDKITSYNDEEEPLEGYKI-LYYL 959
Query: 537 DQDMSR-ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595
D R A I +T+ I L PG Y ++V +S GGDG S P G ++
Sbjct: 960 DGRFERDATKVDIKGADTIKGTISGLQPGATYLLQVQGYSEGGDGVTSDPIKIPLYGSQR 1019
Query: 596 EFKSGSPALYS 606
+ +P+++
Sbjct: 1020 QI-GAAPSMHC 1029
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 2 AGEGGNVTIFCN-PEAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
A EG + CN P+A P F W KD N + R I NGN+ + V + D G Y
Sbjct: 135 ATEGNGFMLSCNAPDAYPGLSFYWVKDIEFNFVRESERLMIASNGNMYFAKVDQGDQGDY 194
Query: 59 SCTATNVHGMDESKG 73
SC N+ +D + G
Sbjct: 195 SCIVKNI--LDAASG 207
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKK---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+V+I C + P+P + WKK D NI+ R G L I+ + D+G + C A+
Sbjct: 47 SVSIECEADGYPRPTYKWKKNDVDVNILAD--NRLTLMEGKLTIAEPRQSDAGSFQCFAS 104
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLP-----PKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
N +G+ S+ I + + P PK+ + L C+A + +++ W
Sbjct: 105 NDYGVVLSQ---IATLSFGFVDPFPRQGQSPKVATEGN-GFMLSCNA-PDAYPGLSFYW- 158
Query: 119 HNGVRIGNMDLNEL-ETPNINI-DGGLLEITNASFADAGEYECVVKSTV---------GK 167
+ +++ N + E+ + I G + D G+Y C+VK+ + G+
Sbjct: 159 -----VKDIEFNFVRESERLMIASNGNMYFAKVDQGDQGDYSCIVKNILDAASGAGQDGR 213
Query: 168 ISTKTTVIV 176
IS + +V V
Sbjct: 214 ISPQISVSV 222
>gi|443687293|gb|ELT90327.1| hypothetical protein CAPTEDRAFT_180331 [Capitella teleta]
Length = 1108
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 328/639 (51%), Gaps = 32/639 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKP---KFVWKKDGNII----GSGGRRKIFENGNLLISPVSRD 53
+A GN T++C PEAAP P + +W K+G + G R + NGN+ IS V +
Sbjct: 487 FATALGNTTLYCRPEAAPYPSAEEIIWYKNGVPLNPGSGENDRVQQLPNGNVFISNVQQS 546
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLD 112
D G+Y C +N +G E+ G L VL + PP T I +R L C A +LD
Sbjct: 547 DQGVYKCHVSNSYGEAETVGNLTVLSKSTTTLTQPPLDTNIQVNRTNFLSCMASYNPVLD 606
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V Y+W H G+M L E E GGL I A F G Y C V S+ G +
Sbjct: 607 VTYVWYH-----GDM-LVEFEKVFRLYVGGLY-IMKAQFEHQGRYTCRVHSSSGMTAASA 659
Query: 173 TVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW--FNV 228
TV + GPP P GV Q V +S +QW T RPI Y I W W
Sbjct: 660 TVQILGPPSEPAGVFIQSATVTTSSVVVQWKASGTTTRPIISYVIEGYNFWEGFWRILFT 719
Query: 229 SEHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
SE + ++ +E NV L P+STY+ ++ A N G PS+PS ++ T A K
Sbjct: 720 SEFISALDMQLDEDERETMHFNVTDLRPYSTYQLRIRAENSYGTSIPSTPSQEFTTWAVK 779
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
P +AP +GGGGG++GDL+I+W+PL + N P I Y++ + + D E+ G++
Sbjct: 780 PDRAPEEVGGGGGRVGDLTITWKPLEEWEYNGPGIGYRVRRKNRGDDEWDKTFDIPGGDI 839
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
V + +Y EYEV QA ND G GP S + I SA +P V Q V ++ FNSTA
Sbjct: 840 SRYVDLVGEPNFYREYEVTAQAYNDQGFGPVSPISIIRSAMGLPTVIAQNVRAQPFNSTA 899
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
V W P+E R++I+G+L G+R+ YWKE EE A + L++GL+P+T Y
Sbjct: 900 CLVHWEPVEDSRDHIKGKLGGYRLSYWKECCETEEMAPRVTIDGQASEGLVIGLEPNTPY 959
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
Y VM +N AG GP+S+ +++RT R AP P V + + T + V++R VS + EEEP
Sbjct: 960 YFDVMVWNQAGNGPKSQYFIQRTLRTAPINMPVEVQVLRKSGTAIEVSFRGVSTTSEEEP 1019
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+ GYKVR+W + + D TL D DL Y +R +S GG G MSSP
Sbjct: 1020 LEGYKVRIWADGEHLKVGEDYDSGKETTLYID--DLRSDVMYKLRAYGYSRGGMGTMSSP 1077
Query: 586 AITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVA 624
A+ F + GS A S+S TL++ + +F++
Sbjct: 1078 AVKFML--------GSAAAVSSSITLIVTLCVFNRLFLS 1108
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 39/215 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-----GRRKIFENGNLLI--SPVSRD 53
+A G ++T C P P++ W K+ I+ + R +I N N+LI +
Sbjct: 387 FADIGTDLTWRCQAGGNPSPQYHWLKNTEILSNDTIPEEDRGRIIVNNNVLIIRNLDPER 446
Query: 54 DSGIYSCTATNVHGMDESKGRLIVL-HGPSYYEQL-PPKITIAAHRNLQLRCSAH----- 106
D+G+Y C ATN+ G + S G L VL P++ + L P A N L C
Sbjct: 447 DNGMYQCQATNMLGTEYSTGELRVLSFAPNFKKYLMQPNQFATALGNTTLYCRPEAAPYP 506
Query: 107 -TEELLDVAYIWTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
EE+ IW NGV + G D + + PN N+ I+N +D G Y+C V
Sbjct: 507 SAEEI-----IWYKNGVPLNPGSGENDRVQ-QLPNGNV-----FISNVQQSDQGVYKCHV 555
Query: 162 KSTVGKIST--------KTTVIVEGPPGLPGGVQV 188
++ G+ T K+T + PP L +QV
Sbjct: 556 SNSYGEAETVGNLTVLSKSTTTLTQPP-LDTNIQV 589
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 9 TIFCNPEAAPKPKFVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRD--DSGIYSCT 61
+I C +A P+ +F W ++ I + R NG L+I + D D G Y CT
Sbjct: 85 SIICTVDAYPEAEFSWTRERAGDKVEIDPNTEPRYTMINGVLIIHEPAADEEDDGKYQCT 144
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 115
ATN G S + Y + P ++ A++ + CS AH E+L Y
Sbjct: 145 ATNKFGSIFSNTIALDF---GYLQDFPKSPRAPVSAIAYQWASVECSPPAHYPEVL---Y 198
Query: 116 IWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKS-----TVGKIS 169
W + I N EL+ P I I + G L + + D G Y C++ GK+S
Sbjct: 199 TWYKDD--IYNFIRPELK-PYIFISNDGRLYFSEITADDVGAYYCLIYKPGQALAEGKVS 255
Query: 170 TKTTV-IVEGPPGL 182
T V +VEG PG+
Sbjct: 256 MPTEVKVVEGSPGI 269
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 45 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 104
LLI + D G Y C +HG S+ ++L G Y+ +L RC
Sbjct: 340 LLIDDIQLYDEGTYRCNVRRLHGQSHSETVDLILQGKPYFTLNLKDQFADIGTDLTWRCQ 399
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKS 163
A Y W N + N + E + I ++ +L I N D G Y+C +
Sbjct: 400 AGGNP--SPQYHWLKNTEILSNDTIPEEDRGRIIVNNNVLIIRNLDPERDNGMYQCQATN 457
Query: 164 TVG 166
+G
Sbjct: 458 MLG 460
>gi|195568167|ref|XP_002102089.1| GD19723 [Drosophila simulans]
gi|194198016|gb|EDX11592.1| GD19723 [Drosophila simulans]
Length = 536
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 4/282 (1%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L I+P SRDD GIY+C
Sbjct: 253 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTIAPTSRDDEGIYTC 312
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 313 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 372
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 373 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 429
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 430 GAPGGVQVIQISKTKAIIEWVDGSNNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 489
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T
Sbjct: 490 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYST 530
>gi|405957294|gb|EKC23517.1| Contactin [Crassostrea gigas]
Length = 1188
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 235/667 (35%), Positives = 338/667 (50%), Gaps = 56/667 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDS 55
A E GN+TI C PEAAP P+ W K+G + G+ ++ NG L I VS D
Sbjct: 531 AAESGNLTIPCQPEAAPAPEITWVKNGAQMSLSFTNGNQNGVQMLLNGYLKIVGVSLGDG 590
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVA 114
G Y+C A N+HG ++ +IV G Y +P + + + + ++C A + LD+
Sbjct: 591 GFYTCHAKNIHGDAQTTTNVIVSKG-VYMAPIPREYNVDRNGTVFIQCQASYDASNLDLV 649
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKT 172
Y+W NG I D GGL L I A + AG YEC+ ++T+ + S T
Sbjct: 650 YVWKFNGELI---DFGRDTLLRKGASGGLNGLFINYADYFHAGLYECIAQTTITQTSVAT 706
Query: 173 TVIVEGPPGLPGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
VIV GPPG+PG V V+ +T S T++WT +G + Y I A+T N+TW +S+
Sbjct: 707 NVIVRGPPGMPGFVYRVKGSETPHSVTLKWTRAPDHGSQVQFYYIEAQTILNTTWRLMSK 766
Query: 231 HVIGKEVDRYTGRKEAS----IENVLVPWSTYEFKVIAGNE-LGYGEPSSPSPQYNTPAD 285
+ + G EA I + L+P++ Y F+V A N L GE S P+ + + P
Sbjct: 767 --VSEMQTLLPGPNEADKRQFIVSGLIPYNNYRFRVYASNAYLDPGEISRPTEEIHIPGA 824
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK----KNDTEFQSETLK 341
KP AP+ +GGGGG +G L+I+W L +E Q+ PN+ Y ++WR+ + + EFQS+TL
Sbjct: 825 KPIMAPTNVGGGGGSVGVLTITWRMLSKELQSGPNVKYYVYWRRSRNGETNLEFQSKTLL 884
Query: 342 EY-----------GNVGIAVVRIPSE-FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM 389
E G G V +PS+ YY ++V V N G GP S + TI+S+E +
Sbjct: 885 ESNKLLIQTNRTDGTYGTYTVPLPSDDLYYLPFDVMVGVGNAFGRGPNSSIETIYSSEGI 944
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAV--- 443
P P V NSTA+ VTW+P++ RE +G + G+RI E D+ E +
Sbjct: 945 PLARPVNVNGYEINSTALWVTWDPMDNTREKAKGVIKGYRITINIEIVDDDTNEISFKKV 1004
Query: 444 ---YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 500
YY + + N ++GL+P+T Y+V V +N+AG SER T AP P V
Sbjct: 1005 VTSYYHGQMSGNQ--VIGLEPNTDYWVTVEMFNSAGLSNPSERQRLSTCLGAPILYPEFV 1062
Query: 501 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD 560
I P +V+V WR VS EE + GYK+R W ++ ANDTI G I
Sbjct: 1063 TISSHGPDSVYVEWRGVSTGLYEETLWGYKMRYWLQGDNIRTANDTI--TGKETQGVIYG 1120
Query: 561 LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSAST----TLLLVMS 616
+ G Y +RVL FS GGDG+M SP F +G + +A T +LL+V
Sbjct: 1121 IQRGYVYSLRVLGFSKGGDGKM-SPTKYFTLGGLVPVDRTISEIRAAGTEVRASLLIVCV 1179
Query: 617 STLYIFV 623
LY V
Sbjct: 1180 CILYSCV 1186
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 63/174 (36%), Gaps = 25/174 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E +VT+ C+ P+P F W K+ ++ G +I N + + R G ++
Sbjct: 463 EESHVTLRCDALGKPRPTFSWYKNSQPLVPVPGEIEIVSN----VLTILRTQVGKHALRP 518
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
T + LP + A NL + C ++ W NG
Sbjct: 519 TFIK------------------YPLPTTLLAAESGNLTIPCQPEAAPAPEIT--WVKNGA 558
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ N + + G L+I S D G Y C K+ G T T VIV
Sbjct: 559 QMSLSFTNGNQNGVQMLLNGYLKIVGVSLGDGGFYTCHAKNIHGDAQTTTNVIV 612
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 33/222 (14%)
Query: 12 CNPEA-APKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSC-------- 60
CNP + P K+ W K+ + + + F + GNL S V D+ IY C
Sbjct: 267 CNPPSYKPNLKYQWMKENSFLLPVLNKHFFVSIGGNLYFSEVQSSDAAIYHCIVTLAALP 326
Query: 61 ---TATNVHGMDESKGRLIVLHGPS---YYEQLPPKITIAAHR------NLQLRCSAHTE 108
AT+ + S G + + G S Y Q+ R ++ + C A+
Sbjct: 327 GDTMATDQPPTETSMGMPLRVAGESASNYPAQIHTDFPAVFPRTPLLGMDVVIECLAYGR 386
Query: 109 ELLDVAYIWTHNGVRIGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
LD Y W +R GN D+ + T + N +L I N F D G Y C VK
Sbjct: 387 SPLD--YSW----IREGNKDIPKKAYTEDYN---RVLVIPNIQFGDEGTYTCNVKGRSNT 437
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
+ ++ P ++ + V + S D RP
Sbjct: 438 DQKSLLLTIDAKPYFLYPLRDLVVDEESHVTLRCDALGKPRP 479
>gi|405966827|gb|EKC32064.1| Contactin [Crassostrea gigas]
Length = 794
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 305/600 (50%), Gaps = 23/600 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GGN+T CNPEAAP P + W K+ N + R ++ +NGNLLI ++ D Y+
Sbjct: 158 GGNITYPCNPEAAPTPTYTWLKNNMELNLNPGDTTSRIRMLQNGNLLILNINPGDVAYYT 217
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A N G S G+L + LPP + + ++ LRC A L DV Y W
Sbjct: 218 CRAENQFGRSTSTGQLQI--ADKVVIGLPPVNVQVKVNQTAFLRCQASYNSLQDVIYTWL 275
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N I +++ N ++ L +T A F +G+Y C ++T + V G
Sbjct: 276 FND-EIIDINKNVYYKQGVSQTLTGLFVTGAQFKHSGKYTCRAQTTKEHTEAWAFLTVLG 334
Query: 179 PPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV--IG 234
P GV ++ + +S + WT GA+NG I + + A + W+ +HV +
Sbjct: 335 NE--PAGVYAIQSSIGTSSLRLSWTVGASNGESILFHTVEALPVMLNEWYTAVDHVSDVS 392
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
V +K L P Y F+V + N G G S S Y T P P+ +
Sbjct: 393 SIVPGLDNKKRVVEVRGLNPGCGYRFRVYSTNSFGVGPRSRQSDAYTTRYGPPTHPPTHV 452
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
GGG G +GDL+I+W PL + P I Y +++R+ N T+ + ++ GNVG V ++
Sbjct: 453 GGGYGSVGDLTITWMPLEDYQLGGPGIGYHVYYRR-NLTDTWTNKVQLTGNVGKYVTQVG 511
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ YY Y+V +Q ND+G GP S V TI+SAE++P ++ V + +N+TA+ VTW+P+
Sbjct: 512 AYNYYLLYDVMIQPYNDLGQGPNSSVSTIYSAEEIPSISITNVQAYPYNATALMVTWDPV 571
Query: 415 ELIRENIRGRLIGHRIKYWKE--DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
RE ++G+L+G+++ YW+ D+P ++ + R + L++GL PD Y V + A
Sbjct: 572 PDTREVMKGKLLGYQVNYWERFTDDPIMNSISW--RGQMSSGLVIGLLPDMWYTVNLQAL 629
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N AG SE + T + AP+ P+ +H+ +V+VTWR V+ EEEPI GY +R
Sbjct: 630 NMAGMSQISETDFQLTLKMAPRMYPTEIHVGSHGSQSVYVTWRGVTTGIEEEPIQGYILR 689
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
W D+ A+D + VG A I + Y +RVL FS GGDG MS + F +G
Sbjct: 690 YWFDGDDIRTASD--VRVGKQDQAVIYGIQKNYLYCLRVLGFSTGGDGTMSE-LVYFTLG 746
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 9/183 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +T C A P+P + W KDG ++ G+ I N L I + D+G+Y C+A
Sbjct: 65 GSKLTWRCEATAMPEPVYEWYKDGVRLVIIPGKISIVRN-VLTIQNLDISDNGMYQCSAE 123
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N++G ++G+L VL P + + P + + + E Y W N +
Sbjct: 124 NIYGKSFTEGQLRVLAFPPSFVKEPLIDVMFGVVGGNITYPCNPEAAPTPTYTWLKNNME 183
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK------STVGKISTKTTVIVE 177
+ N++ + + + G L I N + D Y C + ++ G++ V++
Sbjct: 184 L-NLNPGDTTSRIRMLQNGNLLILNINPGDVAYYTCRAENQFGRSTSTGQLQIADKVVIG 242
Query: 178 GPP 180
PP
Sbjct: 243 LPP 245
>gi|268054015|gb|ACY92494.1| contactin-like protein [Saccoglossus kowalevskii]
Length = 564
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 299/565 (52%), Gaps = 27/565 (4%)
Query: 47 ISPVSRDDSGIYSCTATNVHGMDESKGRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCS 104
I V D G Y+C A N G D+S+GRL++ H + Q P ++I + L+C
Sbjct: 1 IQNVQDSDGGKYTCIARNYIGEDQSEGRLVIRDPHDGTVITQWPLAMSIEVGDDATLKCR 60
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 164
A + +LD+ YIW +GV+I +D ++ + G LEI +A +G Y C +T
Sbjct: 61 ATADPVLDLTYIWLLDGVQIDVLD----DSHYARLRDGNLEIIDAELRQSGVYTCTAHTT 116
Query: 165 VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ ++S VI++G PG P GV+ ++ S ++W++G +N PI Y + +RT
Sbjct: 117 IDEVSKSAEVIIKGAPGPPAGVRASDITTNSCQLRWSEGFSNNDPIKTYTVQSRTKEEPE 176
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
W ++R ++ N L PWS Y+F+V A N G GEPS PSP+Y+T
Sbjct: 177 WI----------IEREGIPDLSASLNSLSPWSNYQFRVSAVNSYGRGEPSLPSPEYSTHE 226
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
DKPY P +GGGGGK GDL I+W+PL R+ QNAP + Y ++W+K N E S+ +
Sbjct: 227 DKPYHEPRNVGGGGGKTGDLRITWDPLSRQDQNAPGLGYYVYWKKANSREEYSKGVVNDE 286
Query: 345 NVGIAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
VG+ V+ +P+ Y +Y+V+V N G GP S + TI+S E P AP V + +
Sbjct: 287 AVGVYTVKGVPT---YVQYDVRVGVFNAKGDGPNSTISTIYSHESAPSEAPDNVEAEATS 343
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ I VTW+ I N++G+L G+++KYW D+ E TA + I L T
Sbjct: 344 GSTIKVTWDSIST--NNLKGKLRGYKLKYWSSDDSEATASTVSTPGVTTRYEIQNLDYST 401
Query: 464 KYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIKGINPTTVHVTW-RYVSPSF 521
Y +KV+AY+ G GP S+ + T + APQ P V + +++ VTW + S +
Sbjct: 402 VYNIKVLAYSGGGNGPASDNVVRVTTLKSAPQDAPENVKAAVSSWSSILVTWDKITSYND 461
Query: 522 EEEPIIGYKVRVWEVDQDMSR-ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
EEEP+ GYK+ ++ +D R A I +T+ I L PG Y ++V +S GGDG
Sbjct: 462 EEEPLEGYKI-LYYLDGRFERDATKVDIKGADTIKGTISGLQPGATYLLQVQGYSEGGDG 520
Query: 581 RMSSPAITFQMGEEKEFKSGSPALY 605
S P G +++ +P+++
Sbjct: 521 VTSDPIKIPLYGSQRQI-GAAPSMH 544
>gi|405963886|gb|EKC29418.1| Protein roadkill [Crassostrea gigas]
Length = 1991
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 307/606 (50%), Gaps = 24/606 (3%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + I C PEAAP P W K+ +I G R K+ NGNL I ++ D+G Y+C A N
Sbjct: 933 GEIIIMCKPEAAPAPTITWTKNSISISPDGNRIKLMPNGNLQIKDLTYGDAGFYTCIADN 992
Query: 65 -VHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+ +S G+L++ +PP + +R + C A + LD+ Y+WT NG
Sbjct: 993 GIPPAAKSTGQLVIQSATVI--TIPPYTDPVVVNRTTFIPCKASYDINLDLVYMWTFNG- 1049
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
++ + + + N L I F AG YEC+ K+T+ + + T ++V GPPG
Sbjct: 1050 KLIDFEKEFHYRLDTNPSHSGLNIIMTQFKHAGVYECIAKTTLNQEAKSTPLVVYGPPGE 1109
Query: 183 PGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH------VIG 234
P GV V+ T S + + GA +G ++H+ + + W +S++ V+
Sbjct: 1110 PAGVVGVDGSATHNSILLAFFPGAEHGSRVSHFIVEREIEYEPGWKLISQNYPEPFTVVQ 1169
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA--PS 292
+ ++ IE L P + Y F++ N+ G G S PSP T P A
Sbjct: 1170 GTGGQNKDMRQIKIEEDLHPGNGYRFRIAGVNQYGVGTWSVPSPFIETKPAAPDVAVDSE 1229
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-----DTEFQSETLKEYGNVG 347
I GG G +GDLSI W + +E AP Y ++WR+ D ++ E E
Sbjct: 1230 YIVGGNGSVGDLSILWNRMDQEFHGAPGFGYIVYWRRYKPSSVYDALWRKEGPFEDWTKD 1289
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
V++ E YY EYE+K+Q N +G GP S ++SAE MP APQG++ NSTA+
Sbjct: 1290 RLTVQVGEENYYLEYEIKIQVYNVMGKGPNSTEAVVYSAEGMPIAAPQGLYCDAHNSTAM 1349
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR-NWALIVGLQPDTKYY 466
VTW + RE ++G++ G+++ YW + + E Y+ + + +++GL PDT ++
Sbjct: 1350 LVTWELVADTRETMKGKVWGYQVNYWLDGDDEPVYKQYIRYEGQVSEGIVIGLFPDTNFW 1409
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+V +N AG GP SE++++ T + P+ P V++ ++ ++V VTWR +S S EEE +
Sbjct: 1410 FEVQVFNTAGLGPLSEKFIQETLHEVPKLYPQEVYVHSLSSSSVRVTWRGISTSREEETL 1469
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
GY V W+ + D R + + D+ + G Y +RV +S+GG+GR SP
Sbjct: 1470 SGYMVYFWKAN-DHFRNAEQFETAKFAISHDLYGIQKGVVYAVRVAGYSDGGEGR-KSPT 1527
Query: 587 ITFQMG 592
+ F +G
Sbjct: 1528 VYFTLG 1533
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
+ +G +T C P+P + W K+G I+ + GN+L P ++ +G+Y
Sbjct: 834 HVDKGSQLTWRCEAMGYPQPVYTWFKNGEILQENVNSDLVITGNILTIPNLAEKHNGMYQ 893
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATNVHG S G+L VL+ ++ P + + N ++ E WT
Sbjct: 894 CAATNVHGTAMSAGQLRVLYFSPTLQKYPVQSHMVGALNGEIIIMCKPEAAPAPTITWTK 953
Query: 120 NGVRIGNMDLNELE-TPNINIDGGLLEITNASFADAGEYECVVKS-------TVGKISTK 171
N + I + D N ++ PN G L+I + ++ DAG Y C+ + + G++ +
Sbjct: 954 NSISI-SPDGNRIKLMPN-----GNLQIKDLTYGDAGFYTCIADNGIPPAAKSTGQLVIQ 1007
Query: 172 TTVIVEGPP 180
+ ++ PP
Sbjct: 1008 SATVITIPP 1016
>gi|348513041|ref|XP_003444051.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
Length = 1095
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 293/599 (48%), Gaps = 42/599 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + G V I C P+AAPKP F W KD ++ + R I+E+G+L I V+R D G Y+C
Sbjct: 502 AAKNGRVVIECRPKAAPKPAFSWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCF 561
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L+V+ + P + N ++C+A ++ LD+ +IW+ +G
Sbjct: 562 AENDRGKANSTGDLLVMDS-TKITLAPSNTDVKVGENTSMQCAASHDQSLDITFIWSLDG 620
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + D E G L I N AG+Y C ++ V I+ ++V GPP
Sbjct: 621 RVIDLHKDSQHYERTTNGSSNGELLIKNVQLKHAGQYTCTAQTPVDNITASAHLVVRGPP 680
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDR 239
G PGGV+++E S +QW+ GA N PI+ Y I + + N W N + + E
Sbjct: 681 GAPGGVRIIEKTDKSVKLQWSRGADNHSPISKYTIQYKDQFSNDVWKNATTFPVNVE--- 737
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW+ YEF+VIA N LG G+PS+PSP T P APS +GGGGG
Sbjct: 738 --GNAEMTTVVDLIPWTDYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGG 795
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY- 358
+L+I+W P+ + PN Y + ++ +++ E++ +AV + Y
Sbjct: 796 ASRELTITWTPVKPKYYYGPNFGYIVAFKPQDEQEWKR----------VAVADPQARRYV 845
Query: 359 --------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
TE++VKV+A N G GP S I+SA+D P AP V +R ++ A V+
Sbjct: 846 HKASDIPPLTEFQVKVKAFNVQGEGPYSLTAIIYSAQDAPAEAPAVVEARALSAKAATVS 905
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
W P+ L G+++KYW+ E A + N + L+P T+Y ++V
Sbjct: 906 WMPLSY------SNLDGYQVKYWESGQSEGQAETIGVSSRENHTKLENLRPYTEYIIEVR 959
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YN+AG GP S + T + P + P + K + ++++ W V P E I GY+
Sbjct: 960 GYNSAGYGPPSHHFRVLTKKPPPDRAPKII-AKKVKGQSINIAWEQVEPMANESSIEGYR 1018
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADI-VDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
V Q T + NT +I + L P Y + V A + GGDG ++ IT
Sbjct: 1019 VLYRPEGQ-------TTGTLYNTYKRNIDLPLPPNGNYVVEVRAHTEGGDGATTTVQIT 1070
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 243/605 (40%), Gaps = 92/605 (15%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+ T+ C PKP W K+G + + + S ++ DDSG+Y C A N H
Sbjct: 424 DYTMSCKASGKPKPHIRWLKNGEPV---------DRNEMRFSSLTFDDSGMYQCIAENRH 474
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G+ + L V +E+ P K +AA +N ++ + A+ W+ + + N
Sbjct: 475 GVIYANAELRVFACAPTFERNPVKRVLAA-KNGRVVIECRPKAAPKPAFSWSKDTELLSN 533
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST-------KTTVIVEGP 179
T + G LEI N + AD G Y C ++ GK ++ +T I P
Sbjct: 534 ------STRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGDLLVMDSTKITLAP 587
Query: 180 P------GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVS 229
G +Q H S I + + +GR I +K TN +S +
Sbjct: 588 SNTDVKVGENTSMQCAASHDQSLDITFI-WSLDGRVIDLHKDSQHYERTTNGSSNGELLI 646
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
++V K +YT + ++N+ + + + G P +P
Sbjct: 647 KNVQLKHAGQYTCTAQTPVDNITA----------SAHLVVRGPPGAP------------- 683
Query: 290 APSRIGGGGGKI---GDLSISWEPLPREKQNAPNIYYKIFWRK-------KNDTEFQSET 339
GG +I D S+ + ++P Y I ++ KN T F
Sbjct: 684 -------GGVRIIEKTDKSVKLQWSRGADNHSPISKYTIQYKDQFSNDVWKNATTF---P 733
Query: 340 LKEYGNVGIAVV--RIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQG 396
+ GN + V IP +T+YE +V A N +G G P + I + E +P VAP
Sbjct: 734 VNVEGNAEMTTVVDLIP----WTDYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSD 789
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V G S + +TW P++ + G G+ + + +D E V R +
Sbjct: 790 VGGGGGASRELTITWTPVK--PKYYYGPNFGYIVAFKPQDEQEWKRVAVADPQARRYVHK 847
Query: 457 VG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ P T++ VKV A+N GEGP S + + + AP + P+ V + ++ V+W
Sbjct: 848 ASDIPPLTEFQVKVKAFNVQGEGPYSLTAIIYSAQDAPAEAPAVVEARALSAKAATVSWM 907
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
+S S + GY+V+ WE Q +A +TI + +L P Y + V ++
Sbjct: 908 PLSYSN----LDGYQVKYWESGQSEGQA-ETIGVSSRENHTKLENLRPYTEYIIEVRGYN 962
Query: 576 NGGDG 580
+ G G
Sbjct: 963 SAGYG 967
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 29/169 (17%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G NVT+ C P P+ WKK DG++ + R L + V +D G Y C A
Sbjct: 333 GQNVTLECFALGNPVPEVRWKKIDGHLPSNHEVR--MTGTQLHLYNVQFEDGGTYKCEAV 390
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ----LRCSAHTEELLDVAYIWTH 119
N G D R+ V P + E + + ++L+ + C A + + W
Sbjct: 391 NSKGKDYHTARVSVEAFPEWVEHIS-----STEKDLRSDYTMSCKASGKPKPHIR--WLK 443
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG + D NE + ++ +F D+G Y+C+ ++ G I
Sbjct: 444 NGEPV---DRNE------------MRFSSLTFDDSGMYQCIAENRHGVI 477
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 456 IVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+V L P T Y +V+A N G G P + + +T P PS V G + +TW
Sbjct: 745 VVDLIPWTDYEFRVIATNTLGTGDPSNPSPIIKTLEAVPVVAPSDVGGGGGASRELTITW 804
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
V P + P GY V D+ + P D+ P + ++V AF
Sbjct: 805 TPVKPKYYYGPNFGYIVAFKPQDEQEWKRVAVADPQARRYVHKASDIPPLTEFQVKVKAF 864
Query: 575 SNGGDGRMSSPAITF 589
+ G+G S AI +
Sbjct: 865 NVQGEGPYSLTAIIY 879
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 25/195 (12%)
Query: 1 YAGEGGNVTIFCNPE----AAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDS 55
Y EG + C P A +++ + I RR + + GNL IS V D
Sbjct: 224 YVKEGQGAVLLCAPPPHYPAELSFRWILNEFPTFIIPDKRRFVSQITGNLYISKVDSSDR 283
Query: 56 GIYSCTAT----------NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 105
G YSC A+ N ++ R I + P+ P T +N+ L C A
Sbjct: 284 GNYSCIASSPSISKSVFSNYIPLEPQTERPIRKY-PADLRVKFPDTTALVGQNVTLECFA 342
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ +V R +D + + + G L + N F D G Y+C ++
Sbjct: 343 LGNPVPEV---------RWKKIDGHLPSNHEVRMTGTQLHLYNVQFEDGGTYKCEAVNSK 393
Query: 166 GKISTKTTVIVEGPP 180
GK V VE P
Sbjct: 394 GKDYHTARVSVEAFP 408
>gi|334335510|ref|XP_001373638.2| PREDICTED: contactin-3 [Monodelphis domestica]
Length = 1031
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 202/623 (32%), Positives = 303/623 (48%), Gaps = 25/623 (4%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G++ IF C P+A+PK WKK I+ S R I ++G L I+ V++ D G Y+C A N
Sbjct: 426 GSLVIFDCKPKASPKAHCSWKKGDEILQSSERTAILKDGGLQIANVTKLDVGTYTCIAEN 485
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VR 123
G S +L+V P+ P + ++ ++ L C + LLD+ + W NG +
Sbjct: 486 QFGKASSSTKLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIVFTWYFNGAIT 544
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 545 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTEVDSVSSAADLIVRGSPGPP 603
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N PIT Y I ART ++ W ++ D G+
Sbjct: 604 ESVKVDEITDTTAQLSWKEGTDNHSPITSYVIQARTPFSVGW-----QIVTTVPDTIDGK 658
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 659 TFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 718
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 719 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESILSFSPYE 777
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+W+ I + G
Sbjct: 778 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSS--G 835
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ I+YW E+++ A + GLQ + YY V AYN+AG GP S
Sbjct: 836 RLLGYEIRYWNNGGKEDSSNRVKVMGNETTARLQGLQSNLVYYTAVRAYNSAGTGPFSAT 895
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + + V + W V E + GYKV S
Sbjct: 896 VNATTKKMPPSQPPGNV-VWNATESKVLINWEQVKAMDNESEVTGYKVFY-----RTSSQ 949
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGS-- 601
N+ I N A+++ L + Y + V A ++GGDG S ++ SGS
Sbjct: 950 NNMNILNTNKTSAELL-LPVNEDYIIEVKASTDGGDGTSSEQIRIPRITNMDARGSGSAV 1008
Query: 602 ----PALYSASTTLLLVMSSTLY 620
P L S TTL +++ TL+
Sbjct: 1009 WNAYPFLSSCITTLPIILVKTLW 1031
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 140/617 (22%), Positives = 231/617 (37%), Gaps = 78/617 (12%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + S + NG L I ++D+G+Y C
Sbjct: 241 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMRKSNGMLEIPNFQQEDTGLYECI 300
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL P ++ Q+ I A NL C A + +Y W NG
Sbjct: 301 AENSRGKNIARGRLTYYAKP-HWVQMIKDIEAAVEDNLYWECRASGKP--KPSYRWLKNG 357
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + + ID G L I + D+G Y+C+ ++ G I S + V+ P
Sbjct: 358 DGL-------IVEERVQIDNGALSIAVLNVNDSGMYQCIAENKHGLIYSSAELKVVASAP 410
Query: 180 PGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ ++++V S I D P H +W E + E
Sbjct: 411 DFSKNPMKKLIQVQIGSLVI--FDCKPKASPKAH----------CSWKKGDEILQSSERT 458
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
I NV + IA N+ +G+ SS + T + APS +
Sbjct: 459 AILKDGGLQIANV-TKLDVGTYTCIAENQ--FGKASSSTKLVVTEPTRITLAPSNM---D 512
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIAV 350
+G+ I LP + Q+ P + W KK+ + F+ G++ I
Sbjct: 513 VSVGESVI----LPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRN 568
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM----PQVAPQGVFSRGFNSTA 406
+++ + +Y VQ +EV ++ SA D+ P+ V T
Sbjct: 569 IQLK---HSGKYVCMVQ----------TEVDSVSSAADLIVRGSPGPPESVKVDEITDTT 615
Query: 407 INVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
++W I +I R + W+ + + T A +V L P
Sbjct: 616 AQLSWKEGTDNHSPITSYVIQARTPFSVGWQIVTTVPDTIDGKTFT----ATVVDLNPWV 671
Query: 464 KYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+Y +V+A N G G P RT P+ PPS V G + + + +TW V +
Sbjct: 672 EYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQ 731
Query: 523 EEPIIGYKVRVWEVD-----QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
GY V + Q + + DT P + I+ SP Y ++V ++N
Sbjct: 732 NGEGFGYVVAFRPLGVTTWIQTVVTSPDT--PRYVFRNESILSFSP---YEVKVGVYNNK 786
Query: 578 GDGRMSSPAITFQMGEE 594
G+G S F EE
Sbjct: 787 GEGPFSPVTTVFSAEEE 803
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLL-ISPVSRDDSGIYSCT 61
E +T+ C + P P + W+ +G+ I S R GNL+ I+P D G Y C
Sbjct: 44 EEKKITLNCEAKGNPSPHYRWQLNGSDIDLSMDYRYKLIGGNLVVINPSRNRDIGTYQCF 103
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G SK +L + + ++ +++ + + L C H+ EL +Y W
Sbjct: 104 ATNSLGTVVSKEAKLQFAYLEHFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 160
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 161 FNEYP---SFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 204
>gi|327266140|ref|XP_003217864.1| PREDICTED: contactin-4-like [Anolis carolinensis]
Length = 1020
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 302/621 (48%), Gaps = 27/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ TI C P+A+P+P F WKK I+ R I E+G L I V++ D+G Y+C ATN
Sbjct: 415 GGDATIECKPKASPRPTFTWKKGKEILRENERYTIMEDGTLKIINVTKADAGSYTCIATN 474
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S G L V+ P+ + P + + A ++ L C + LD+ + W+ NG I
Sbjct: 475 HFGVASSTGNL-VIKDPTRFMVAPTSMDVTAGESILLPCQVSHDHPLDIMFTWSFNGHLI 533
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E G L I + AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 534 DFERDGDHFERVGGQDSAGDLMIRSIQLNHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 593
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y + ART ++ W V + + + +D G
Sbjct: 594 EAVTIDEITDTTAQVSWRPGPDNRSPITTYVVQARTPFSVGWQAV--NTVPEVID---GN 648
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A + +G GEPS PS + T P P+ + GGGG +
Sbjct: 649 TFTATVVGLNPWVEYEFRVVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSE 708
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 709 LVITWETVPEELQNGGGFGYVVAFRPVGTISWM-QTVVASPDASKYVFRNESLPPFSPYE 767
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V ++SA++ P AP +F+R +++ + V W+ L +G
Sbjct: 768 VKVGVYNNRGEGPFSHVTVVYSADEEPNKAPTSIFARSMSASEVEVFWS--MLPETQSKG 825
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ ++YW+ + EE A + T + +A I L+ + Y++ V AYN AG GP S
Sbjct: 826 RIQGYEVRYWQHGDKEEQAGRMKTMTNQTFARISNLKGNALYHLAVKAYNTAGMGPSSAV 885
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 886 VNVTTKKPPPSQPPGNI-IWNSSDSKIILNWDQVKAQNNESEVKGYKVFYRWNKQSSTSI 944
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 945 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGNSSEEIRIPKISNAYARGSS 995
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 996 ASTSNACTLSAISTIMISLTA 1016
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 144/619 (23%), Positives = 237/619 (38%), Gaps = 81/619 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
+ +G V + C P P W++ DG I RR ++ ++L P ++D+G+Y
Sbjct: 230 SAKGTTVRLECFALGNPVPAISWRRADGKQIPKKARRH--KSSSILEIPNFQQEDAGLYE 287
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A NV G + ++G+L + P + Q +A N+ C A+ +Y W
Sbjct: 288 CVAENVRGRNVARGQL-TFYAPPNWTQRINDAHVAIEENIYWECKANGRP--KPSYSWLK 344
Query: 120 NGVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVI 175
+G EL P I I+ G L ITN S +D G Y+CV ++ G IS + +VI
Sbjct: 345 DG---------ELLLPQERIQIEHGTLTITNVSLSDTGMYQCVAENRYGAIYISAELSVI 395
Query: 176 VEGPPGLPGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
GP ++ + + K ATI+ A+ RP TW E I
Sbjct: 396 AVGPDFSKNYLKRLTLVKVGGDATIECKPKAS-PRP------------TFTWKKGKE--I 440
Query: 234 GKEVDRYTGRKEASIENVLVPWSTY-EFKVIAGNELGYGEPSSPSPQYNTPADKPYQ--- 289
+E +RYT ++ +++ + V + + IA N G + N P +
Sbjct: 441 LRENERYTIMEDGTLKIINVTKADAGSYTCIATNHFGVASSTG-----NLVIKDPTRFMV 495
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYG-- 344
AP+ + G+ SI LP + + + W D E + + G
Sbjct: 496 APTSMDVTAGE----SIL---LPCQVSHDHPLDIMFTWSFNGHLIDFERDGDHFERVGGQ 548
Query: 345 -NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM----PQVAPQGVFS 399
+ G ++R + +Y VQ + V + +A D+ P P+ V
Sbjct: 549 DSAGDLMIRSIQLNHAGKYVCMVQ----------TSVDKLSAAADLIVRGPPGPPEAVTI 598
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAVYYLSRTTRNWALI 456
T V+W P R I ++ R + W+ N + + T A +
Sbjct: 599 DEITDTTAQVSWRPGPDNRSPITTYVVQARTPFSVGWQAVNTVPEVIDGNTFT----ATV 654
Query: 457 VGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
VGL P +Y +V+A + G G P RT P+ P+ V G + + +TW
Sbjct: 655 VGLNPWVEYEFRVVAASLIGIGEPSKPSEKRRTEEALPEVTPANVSGGGGTKSELVITWE 714
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
V + GY V V P + L P Y ++V ++
Sbjct: 715 TVPEELQNGGGFGYVVAFRPVGTISWMQTVVASPDASKYVFRNESLPPFSPYEVKVGVYN 774
Query: 576 NGGDGRMSSPAITFQMGEE 594
N G+G S + + EE
Sbjct: 775 NRGEGPFSHVTVVYSADEE 793
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 19/167 (11%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C + PKP WK +G I IG R + E L+ +P D+G Y C ATN
Sbjct: 37 VKLSCEVKGNPKPTIRWKLNGTIVDIGMDYRYSVVEGSLLINNPNKTQDAGTYQCIATNS 96
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNG- 121
G S+ +L + + + +++ + + L C H+ EL+ Y W N
Sbjct: 97 FGTIVSREAKLQFAYLEKFKTRTRSTVSVRQGQGMVLLCGPPPHSGELI---YAWIFNEY 153
Query: 122 ---VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
V N ET N L I +D G Y CVV ++V
Sbjct: 154 PSFVHQDNRRFVSQETGN-------LYIAKVEKSDVGNYTCVVTNSV 193
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPK 90
E GNL I+ V + D G Y+C TN + G L + P Q P
Sbjct: 168 ETGNLYIAKVEKSDVGNYTCVVTNSVTNNRVLGPTTPLILRNDGVMGEYEPKIEVQFPEM 227
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150
+ A ++L C A + +++ +G +I + +LEI N
Sbjct: 228 VPSAKGTTVRLECFALGNPVPAISW-RRADGKQIPKKARRHKSS-------SILEIPNFQ 279
Query: 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
DAG YECV ++ G+ + + PP + V I W + NGRP
Sbjct: 280 QEDAGLYECVAENVRGRNVARGQLTFYAPPNWTQRINDAHV-AIEENIYW-ECKANGRPK 337
Query: 211 THY 213
Y
Sbjct: 338 PSY 340
>gi|148228227|ref|NP_001085050.1| contactin 4 precursor [Xenopus laevis]
gi|47940323|gb|AAH72368.1| MGC84491 protein [Xenopus laevis]
Length = 1028
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 304/621 (48%), Gaps = 27/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+V I C P+A+PKP WKK ++ R I ++G L IS +++ D+G Y+CTA+N
Sbjct: 423 GGSVLIECKPKASPKPSTTWKKGKELLKESPRISILDDGTLKISNLTKADAGSYTCTASN 482
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+++ W NG I
Sbjct: 483 HFGTASSTGTLVV-KDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLI 541
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E G L I + AG+Y C+V ++V K+S +IV GPPG P
Sbjct: 542 DFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ V + +T+A + W G N PI Y + ART ++ W VS + + VD G+
Sbjct: 602 DALTVEVIAETTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+S N L PW YEF+VIA NE+G GEPS PS + T P P+ + GGGG G+
Sbjct: 657 SFSSTVNGLSPWVEYEFRVIAINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGGSKGE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 717 LVITWEPVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++ ++SAE+ P AP GVFSR + I V+W I + +G
Sbjct: 776 VKVGVYNNKGEGPFSQLTVVYSAEEEPGRAPAGVFSRSLTAWDIEVSW--IAVPGSLSKG 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ ++YWK++ E+ A + + + LQ T Y++ + AYN+AG GP S
Sbjct: 834 RIQGYEVRYWKQNEKEQNARKLRTLGNQTSTKLSHLQGHTLYHLNIRAYNSAGTGPASTS 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + N + + + W V+ +E + GY+V W S
Sbjct: 894 VNVTTRKPPPSQPPGNIIWNSSN-SKIILNWDQVTAQEDESEVKGYRVLYRWNRPGGSSV 952
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
N T + + D D Y + + + S GG+G S P ++ + G
Sbjct: 953 IETNQTSVELSLPYDED---------YIIEIRSVSEGGEGISSEPIRIPRI--SNAYAQG 1001
Query: 601 SPALYSASTTLLLVMSSTLYI 621
S A S + TL + STL I
Sbjct: 1002 SGASTSNACTLSAI--STLMI 1020
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
N+ C PKP + W K+G + S GR +I ++G+L I+ V+ DSG+Y C A N H
Sbjct: 333 NILWECKASGRPKPSYTWLKNGQRLQSKGRLQI-DHGSLTITSVNISDSGMYQCLAENKH 391
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S L V+ GP + + ++T+ ++ + C + +
Sbjct: 392 GTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSTTW-------KK 444
Query: 125 GNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L E+P I+I D G L+I+N + ADAG Y C + G S+ T++V+ P
Sbjct: 445 GKELLK--ESPRISILDDGTLKISNLTKADAGSYTCTASNHFGTASSTGTLVVKDP 498
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ DG I RR +G L I ++D+G Y C
Sbjct: 238 SAKGSTVKLECFALGNPVPTITWRRADGKPISRKVRRH-RSSGVLEIPNFQQEDAGPYEC 296
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L PS+ +++ IA N+ C A +Y W N
Sbjct: 297 VAENTRGKNMVRGQLTYFAPPSWVQKI-NDAHIAIEENILWECKASGRP--KPSYTWLKN 353
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G R+ + + ID G L IT+ + +D+G Y+C+ ++ G I S + VI G
Sbjct: 354 GQRLQSKG-------RLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVG 406
Query: 179 PPGLPGGVQVVEVHKTSATI 198
P G V+ V + K ++
Sbjct: 407 PDFSKGFVKRVTLGKVGGSV 426
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E + + C+ + PKP W+ +G ++ R ++ + ++ SP D G + C
Sbjct: 41 EDRTLRLVCDVQGHPKPVVRWRVNGTLMDEAQDYRYRVLDRSLIIASPDRNRDVGTFQCE 100
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ + + S+ + +++ + + L C AH+ EL+ Y W
Sbjct: 101 ATNSLGTILSREAYVQFSYLDSFQTRTRSTVSVREGQGMVLLCGPPAHSGELV---YAWI 157
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N N + G L I +DAG Y CVV + +
Sbjct: 158 FNEYPPFVQQDNRRFVSQVT---GNLYIAKVEPSDAGNYTCVVTNII 201
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 22/191 (11%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYS 59
EG + + C P A +++ + + RR + + GNL I+ V D+G Y+
Sbjct: 135 EGQGMVLLCGPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNLYIAKVEPSDAGNYT 194
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN+ G L + P P ++ A ++L C A
Sbjct: 195 CVVTNIITNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSSAKGSTVKLECFALGNP 254
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + W + + + + G+LEI N DAG YECV ++T GK
Sbjct: 255 VPTIT--WRRADGKPISRKVRRHRS------SGVLEIPNFQQEDAGPYECVAENTRGKNM 306
Query: 170 TKTTVIVEGPP 180
+ + PP
Sbjct: 307 VRGQLTYFAPP 317
>gi|432858868|ref|XP_004068978.1| PREDICTED: contactin-3-like [Oryzias latipes]
Length = 1026
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 299/615 (48%), Gaps = 25/615 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G VT+ C PEA+P +WKK I+ R +F NG L I+ V++ D+ IY+C A N
Sbjct: 428 GSEVTLECKPEASPPAISLWKKGNEILQRSERLSLFSNGTLQIANVTKWDAAIYTCVAKN 487
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + GRLI+ P+ P + I ++ L C ++ LDV + W NG I
Sbjct: 488 QFGSASTSGRLIITE-PTRLTMRPTNMEIIVGESIVLPCQIASDPALDVTFSWAFNGQLI 546
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E ++ G L+ I N G+Y CV+ + V +ST ++V+ PPG P
Sbjct: 547 DFRRDGDHYERVGGSLSGDLM-IRNIQLKHGGKYVCVIDTDVESLSTSAILVVKAPPGPP 605
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V V E+ ++A + WT G NG PIT Y + ART + W + + TG
Sbjct: 606 DKVTVEEITDSTAQLSWTPGRDNGSPITGYSVQARTPFTVGW-----QAMDTVPEAVTGN 660
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L W YEF+V+A N +G GEPS S + T P AP+ +GGGGG +
Sbjct: 661 MLTATVVGLNAWVEYEFRVVARNAVGLGEPSPSSAKTRTEDTIPDTAPTDVGGGGGTKSE 720
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+P E QN Y I +R + + G V V R + ++ ++
Sbjct: 721 LVITWEPVPEELQNGDGFGYIIAFRPAGAVTWTRAVISTPG-VSRYVFRNDTIPPFSPFD 779
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
+KV A N+ G GP S + T++SAED+P V P+ V++R ++ I V W + + E
Sbjct: 780 IKVGAYNNRGEGPFSTITTVYSAEDVPSVPPKRVWARSLSAAQIEVMWEAVSDMPE---- 835
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEGPES 481
R++G+ + YW++D +T R T N+ L I GL+ +T +Y+ V A+N AG GP+S
Sbjct: 836 RVLGYEVVYWEDDTKPDTIGKV--RITGNYTLVNITGLKANTAFYLSVAAFNTAGPGPQS 893
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + P + I +T+ + W V + E + GY V V
Sbjct: 894 APINCTTKKPPPDRAPLNIQWTMIG-STLTLHWDPVVATETESKVTGYSVVV-----KKH 947
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGS 601
R N+ N A++ LS Y +++ A S GG+G S P ++ SG+
Sbjct: 948 RYNEINTIFTNKTTAEL-SLSASDNYLIQIKALSEGGEGVGSEPIHIHKLSMGAR-GSGA 1005
Query: 602 PALYSASTTLLLVMS 616
L S + LL+ S
Sbjct: 1006 GHLSRVSLSALLIRS 1020
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + + GR +I ENG L I+ ++ DSG+Y C A N HG
Sbjct: 343 CKASGKPKPSYSWLKNGEQVMAEGRVQI-ENGALSITALNLSDSGMYQCVAENKHGTIYY 401
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
+L+VL ++ + P K + A ++ E +W + GN L
Sbjct: 402 SAQLMVLASAPHFSKTPLKTVLKARLGSEVTLECKPEASPPAISLW-----KKGNEILQR 456
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
E ++ G L+I N + DA Y CV K+ G ST +I+ P L
Sbjct: 457 SERLSL-FSNGTLQIANVTKWDAAIYTCVAKNQFGSASTSGRLIITEPTRL 506
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + V + C P P+ W++ + + N L I +DDSG Y C
Sbjct: 243 AAKESMVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQDDSGTYECI 302
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GR I H ++ Q ++ NL C A + +Y W NG
Sbjct: 303 AENRRGKNVARGR-ISFHAKPHWIQTMTDSALSIEENLFWECKASGKP--KPSYSWLKNG 359
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
++ + + I+ G L IT + +D+G Y+CV ++ G I S + V+ P
Sbjct: 360 EQV-------MAEGRVQIENGALSITALNLSDSGMYQCVAENKHGTIYYSAQLMVLASAP 412
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATN 64
T+ C E +P+P++ W +G +I G R+ G+L+IS + +D DSG+Y CTA N
Sbjct: 48 QATLTCEAEGSPQPQYRWSLNGTLIDPGHNYRRRVSGGSLIISNLDKDQDSGVYQCTAFN 107
Query: 65 VHG-MDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHN 120
G + K L + ++ Q+ + + + + L C H+ EL + W N
Sbjct: 108 TRGSILSRKASLQFAYLDNFKTQMVRSAVNVREGQGVVLLCGPPPHSGEL---TFAWIFN 164
Query: 121 GV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
D I+ + G L I +D G Y CVV +T+ +
Sbjct: 165 QYPYFVQQDSRRF----ISQETGSLYIAKVEPSDVGNYTCVVNNTITR 208
>gi|326928158|ref|XP_003210248.1| PREDICTED: contactin-4-like [Meleagris gallopavo]
Length = 1063
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 298/622 (47%), Gaps = 27/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + WKK +I+ R + ++G+L I V++ D+G Y+C ATN
Sbjct: 456 GGEVIIECKPKASPRPAYSWKKGKDILRENERITVLDDGSLRIVNVTKSDTGSYTCVATN 515
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 516 HFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLI 574
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E G L I + AG+Y C+V+++V KIS +IV GPPG P
Sbjct: 575 DFEKDGDHFEKVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISAAADLIVRGPPGPP 634
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W GA N PIT Y + ART ++ W VS EV GR
Sbjct: 635 EDVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVS---TVPEVIXIDGR 691
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N +G GEPS PS T P P+ + GGGG +
Sbjct: 692 TFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSE 751
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 752 LVITWETVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASPDASRYVFRNESLPPFSPYE 810
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI-R 422
VKV N+ G G S V ++SAE+ P AP V +R ++T I ++W P REN +
Sbjct: 811 VKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP---PRENQHK 867
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ ++ W+ D EETA + + A + LQ + Y++ V AYN AG GP S
Sbjct: 868 GRIQGYEVRCWRHDEKEETARKIRTVGNQTSAKVTNLQGNALYHLAVKAYNTAGTGPSSA 927
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 928 MVNVTTKKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSAS 986
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 987 VIETNRTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGG 1037
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1038 SSSTSNACTLSAISTIMISLTA 1059
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 271 SAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRH-RSNGLLEIPNFQQEDAGLYEC 329
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A NV G + ++G+L P++ +++ + A N+ C H +Y W +
Sbjct: 330 VAENVRGKNVARGQLTFYAQPNWIQKI-SDVHAAIEENVFWEC--HASGRPKPSYRWLKD 386
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L + I+ G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 387 GEPL-------LPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVG 439
Query: 179 P 179
P
Sbjct: 440 P 440
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 79/187 (42%), Gaps = 27/187 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFENGNLLIS-PVSRDDSGIYSC 60
E V + C + P+P WK +G NI IG R E GNLLI+ P D+G Y C
Sbjct: 74 EEKKVKLNCEVKGNPQPTIGWKLNGTNIDIGMDYRYSTVE-GNLLINNPNKTQDTGTYQC 132
Query: 61 TATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIW 117
ATN G S+ +L + ++ ++ +++ + + L C H+ EL Y W
Sbjct: 133 VATNPFGRIVSREAKLQFAYLENFKTRVRSTVSVRQGQGMVLLCGPPPHSGEL---TYAW 189
Query: 118 THNG----VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
N V N ET N L I +D G Y CVV +TV T
Sbjct: 190 IFNEYPSFVHQDNRRFVSQETGN-------LYIAKVEASDVGNYTCVVTNTV------TN 236
Query: 174 VIVEGPP 180
V GPP
Sbjct: 237 SRVLGPP 243
>gi|397522453|ref|XP_003831281.1| PREDICTED: contactin-4 [Pan paniscus]
Length = 1026
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACALSAISTIMISLTA 1022
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|28373122|ref|NP_783200.1| contactin-4 isoform a precursor [Homo sapiens]
gi|332688245|ref|NP_001193884.1| contactin-4 isoform a precursor [Homo sapiens]
gi|55976529|sp|Q8IWV2.1|CNTN4_HUMAN RecName: Full=Contactin-4; AltName: Full=Brain-derived immunoglobulin
superfamily protein 2; Short=BIG-2; Flags: Precursor
gi|26891535|gb|AAM00025.1| contactin 4 [Homo sapiens]
gi|29837411|gb|AAP05786.1| BIG-2 [Homo sapiens]
gi|119584279|gb|EAW63875.1| contactin 4, isoform CRA_c [Homo sapiens]
gi|119584282|gb|EAW63878.1| contactin 4, isoform CRA_c [Homo sapiens]
Length = 1026
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACTLSAISTIMISLTA 1022
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|193783587|dbj|BAG53498.1| unnamed protein product [Homo sapiens]
Length = 807
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLRGSVLYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACTLSAISTIMISLTA 803
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|119584281|gb|EAW63877.1| contactin 4, isoform CRA_e [Homo sapiens]
Length = 807
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACTLSAISTIMISLTA 803
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|28373126|ref|NP_783302.1| contactin-4 isoform c [Homo sapiens]
gi|119584278|gb|EAW63874.1| contactin 4, isoform CRA_b [Homo sapiens]
gi|189067310|dbj|BAG37020.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 213 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 272
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 273 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 327
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 328 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 387
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 388 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 446
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 447 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 502
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 503 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 562
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 563 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 621
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 622 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 672
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 673 GASTSNACTLSAISTIMISLTA 694
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L V+ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L E E I+ DG L I N + +DAG Y C+ + G S+ ++V+ P
Sbjct: 116 GRDILKENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDP 169
>gi|345786234|ref|XP_003432800.1| PREDICTED: contactin-4 isoform 2 [Canis lupus familiaris]
Length = 807
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 322 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
GV + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 382 EGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 612 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GPSTSNACTLSAISTIMISLTA 803
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 187
>gi|345786232|ref|XP_003432799.1| PREDICTED: contactin-4 isoform 1 [Canis lupus familiaris]
Length = 1026
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
GV + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EGVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 831 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GPSTSNACTLSAISTIMISLTA 1022
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGMLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGVDFRYSVVEGSLLINNPNKTQDAGMYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C AH+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLRFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 24/224 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 136 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 195
Query: 62 ATNV---HGMDESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
TN H + LI+ + P P + A ++L C A +
Sbjct: 196 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPETVPTAKGTTVKLECFALGNPVP 255
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 256 TI--IWRRADGKPIARKARR-------HKSNGILEIPNFQQEDAGLYECVAENSRGKNVA 306
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P + + V + W + NGRP Y+
Sbjct: 307 RGQLTFYAQPNWIQKINDIHV-AIEENVFW-ECKANGRPKPTYR 348
>gi|114585183|ref|XP_001138350.1| PREDICTED: contactin-4 isoform 4 [Pan troglodytes]
Length = 1026
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACALSAISTIMISLTA 1022
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|426339224|ref|XP_004033558.1| PREDICTED: contactin-4-like [Gorilla gorilla gorilla]
Length = 807
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 296/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRGILKENERITISEDGNLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSISATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACTLSAISTIMISLTA 803
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRH-KSNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTQD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|16758746|ref|NP_446331.1| contactin-4 precursor [Rattus norvegicus]
gi|55976164|sp|Q62845.1|CNTN4_RAT RecName: Full=Contactin-4; AltName: Full=Brain-derived immunoglobulin
superfamily protein 2; Short=BIG-2; Flags: Precursor
gi|1016012|gb|AAC52262.1| neural cell adhesion protein BIG-2 precursor [Rattus norvegicus]
gi|149036848|gb|EDL91466.1| contactin 4, isoform CRA_a [Rattus norvegicus]
Length = 1026
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 296/621 (47%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + VD G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 775 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ + Y++ V AYN+AG GP S
Sbjct: 832 RIQGYEVKYWRHDDKEENARKIRTVGNQTSTKITNLKGNALYHLSVKAYNSAGTGPSSAA 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 892 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 950
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 951 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 1001
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1002 ASTSNACTLSAISTIMISLTA 1022
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 147/605 (24%), Positives = 244/605 (40%), Gaps = 83/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ +
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRERIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIYA 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + +DAG Y C+ + G S+ V+V+ P + P +
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSM 507
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNSTWFNV 228
QV H WT NG I H++ + +S +
Sbjct: 508 DVTVGESIVLPCQVTHDHSLDIVFTWT---FNGHLIDFDKDGDHFERVG--GQDSAGDLM 562
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ K +Y + S++ K+ A +L P P P D+
Sbjct: 563 IRNIQLKHAGKYVCMVQTSVD-----------KLSAAADLIVRGP--PGPPEAVTIDEIT 609
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 347
++ +SW P P ++P Y I R +Q+ T+ E +
Sbjct: 610 DTTAQ------------LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVSTVPELVDGK 655
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + EYE + A N +G G P + E +P+V P V G + +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 407 INVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWALIVGLQ 460
+ +TW E + E ++ GR G+ + + P ++ L+ +R ++
Sbjct: 716 LVITW---ETVPEELQNGRGFGYVVAF----RPHGKMIWMLTVLASADASRYVFRNESVR 768
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV +NN GEGP S L + + P KPP+++ + ++ T + V W SP
Sbjct: 769 PFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPI 826
Query: 521 FEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ I GY+V+ W D A I VGN I +L YH+ V A+++ G
Sbjct: 827 GKNRGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSAGT 885
Query: 580 GRMSS 584
G S+
Sbjct: 886 GPSSA 890
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P DSG Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ E L A+I+
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGE-LSYAWIFN 160
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ N ET N L I AD G Y CVV +TV T+ V G
Sbjct: 161 EHPSYQDNRRFVSQETGN-------LYIAKVEKADVGNYTCVVTNTV------TSHQVLG 207
Query: 179 PP 180
PP
Sbjct: 208 PP 209
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGSTVKLECFALGNPVPTI--LWRRADGKPIARKARRHKSS-------GILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K V P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>gi|395516508|ref|XP_003762429.1| PREDICTED: contactin-4 [Sarcophilus harrisii]
Length = 1094
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 298/622 (47%), Gaps = 29/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + WKK I+ R E+G+L I V++ D+G Y+C ATN
Sbjct: 489 GGEVVIECKPKASPRPVYTWKKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTCIATN 548
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 549 HFGTASSTGNLVV-KDPTRLLVPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGRLI 607
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I + AG+Y C+V+++V KIS +IV GPPG P
Sbjct: 608 DFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGPP 667
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W GA N P+T Y I ART ++ W V + + + +D GR
Sbjct: 668 EAVTIDEITDTTAQLSWRPGADNHSPVTMYVIQARTPFSVGWQAV--NTVPELID---GR 722
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 723 TFTATVVSLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 782
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 783 LVITWETVPEELQNGGGFGYVVAFRPFGKVSWM-QTVLASADASRYVFRNESLPPFSPYE 841
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G G S V ++SAE+ P P +F+R ++T I V W +P+E + +
Sbjct: 842 VKVGVYNNKGEGSFSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSSPLESLS---K 898
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 899 GRIQGYEVKYWSHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPYSV 958
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 959 TVNVTTKKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 1017
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 1018 VIETNKTSVELSLPFDED---------YIIEIRPFSDGGDGSSSEQIRIPKISSAYARGS 1068
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1069 GASTSNACTLSAISTIMISLTA 1090
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 305 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 363
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A ++ C A+ Y W NG
Sbjct: 364 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEESIFWECKANGRP--KPTYRWLKNG 420
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 421 ESLLTQD-------RIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGP 473
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 109 EEKKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 168
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G SK +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 169 ATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHSGEL---SYAWI 225
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 226 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 267
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 268 TNHKVLGPP 276
>gi|332231553|ref|XP_003264959.1| PREDICTED: contactin-4 isoform 2 [Nomascus leucogenys]
Length = 1026
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 IVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACTLSAISTIMISLTA 1022
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EHLQTRD-------RIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|157909807|ref|NP_001103219.1| contactin-4 isoform 1 precursor [Mus musculus]
gi|55976372|sp|Q69Z26.2|CNTN4_MOUSE RecName: Full=Contactin-4; AltName: Full=Brain-derived immunoglobulin
superfamily protein 2; Short=BIG-2; Flags: Precursor
Length = 1026
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 291/621 (46%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 775 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 832 RIQGYEVKYWRHDDKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSAT 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 892 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 950
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 951 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 1001
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1002 ASTSNACTLSAISTIMISLTA 1022
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 243/606 (40%), Gaps = 85/606 (14%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + +DAG Y C+ + G S+ VIV+ P + P +
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSM 507
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNSTWFNV 228
QV H WT NG I H++ + +S +
Sbjct: 508 DVTVGESIVLPCQVTHDHSLDIVFTWT---FNGHLIDFDKDGDHFERVG--GQDSAGDLM 562
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP-QYNTPADKP 287
++ K +Y + S++ + V A + + G P P + D
Sbjct: 563 IRNIQLKHAGKYVCMVQTSVDKLSV----------AADLIVRGPPGPPEAVTIDEITDTT 612
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
Q +SW P P ++P Y I R +Q+ T+ + +
Sbjct: 613 AQ----------------LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVNTVPDLVDG 654
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + EYE + A N +G G P + E +P+V P V G + +
Sbjct: 655 KTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKS 714
Query: 406 AINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWALIVGL 459
+ +TW E + E ++ GR G+ + + P ++ L+ +R +
Sbjct: 715 ELVITW---ETVPEELQNGRGFGYVVAF----RPHGKMIWMLTVLASADASRYVFRNESV 767
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+P + + VKV +NN GEGP S L + + P KPP+++ + ++ T + V W SP
Sbjct: 768 RPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASP 825
Query: 520 SFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ I GY+V+ W D D I VGN I +L YH+ V A+++ G
Sbjct: 826 IGKNRGRIQGYEVKYWRHD-DKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAG 884
Query: 579 DGRMSS 584
G S+
Sbjct: 885 TGPSSA 890
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKARRHKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>gi|441665503|ref|XP_004091815.1| PREDICTED: contactin-4 [Nomascus leucogenys]
Length = 807
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 IVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACTLSAISTIMISLTA 803
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EHLQTRD-------RIQIEQGTLNITMVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|193787073|dbj|BAG51896.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 213 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 272
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 273 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 327
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 328 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 387
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 388 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 446
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 447 VKVGVSNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 502
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 503 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 562
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 563 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 621
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 622 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 672
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 673 GASTSNACTLSAISTIMISLTA 694
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L V+ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L E E I+ DG L I N + +DAG Y C+ + G S+ ++V+ P
Sbjct: 116 GRDILKENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDP 169
>gi|410036468|ref|XP_003950069.1| PREDICTED: contactin-4 [Pan troglodytes]
Length = 807
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDPYERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACALSAISTIMISLTA 803
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRH-KSNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|194221125|ref|XP_001915937.1| PREDICTED: contactin-4 isoform 1 [Equus caballus]
Length = 1026
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 295/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILRENERISISEDGSLRIVNVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V++TV K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S + +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKIIWMLTVLAS-ADASRYVFRNESVRPFFPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +PI E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPI----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 831 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GPSTSNACTLSAISTIMISLTA 1022
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EAL-------LTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIALGP 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C AH+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 24/224 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 136 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 195
Query: 62 ATNV---HGMDESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
TN H + LI+ + P Q P + A ++L C A +
Sbjct: 196 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPTAKGTTVKLECFALGNPVP 255
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 256 TI--IWRRADGKPIARKARR-------HKSNGILEIPNFQQEDAGLYECVAENSRGKNVA 306
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P + + V + W + NGRP Y+
Sbjct: 307 RGQLTFYAQPNWIQKINDIHV-AIEENVFW-ECKANGRPKPTYR 348
>gi|338714491|ref|XP_003363091.1| PREDICTED: contactin-4 isoform 2 [Equus caballus]
Length = 807
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 295/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILRENERISISEDGSLRIVNVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V++TV K+S +IV GPPG P
Sbjct: 322 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTTVDKLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S + +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKIIWMLTVLAS-ADASRYVFRNESVRPFFPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +PI E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPI----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 612 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GPSTSNACTLSAISTIMISLTA 803
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 EAL-------LTQERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIALGP 187
>gi|410036466|ref|XP_003950068.1| PREDICTED: contactin-4 [Pan troglodytes]
Length = 697
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 298/624 (47%), Gaps = 35/624 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVAIECKPKASPKPVYTWKKGRDIVKENERITISEDGNLRIINVTKSDAGSYTCIATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + P + G G L I N AG+Y C+V+++V ++S +IV GPPG
Sbjct: 213 ---DFDRDGDPYERVGGDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPG 269
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D
Sbjct: 270 PPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID--- 324
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG
Sbjct: 325 GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSK 384
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R + L + V R S ++
Sbjct: 385 SELVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSP 443
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIREN 420
+EVKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E
Sbjct: 444 FEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EK 499
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
RGR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP
Sbjct: 500 NRGRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPS 559
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQD 539
S T + P +PP + I + + + + W V E + GYKV W
Sbjct: 560 SATVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSS 618
Query: 540 MS--RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGE 593
S N T + + D D Y + + FS+GGDG S P I+
Sbjct: 619 TSVIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYAR 669
Query: 594 EKEFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 670 GSGASTSNACALSAISTIMISLTA 693
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYRWLKNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L V+ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVAIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G + E E I+ DG L I N + +DAG Y C+ + G S+ ++V+ P
Sbjct: 116 GRDIVKENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDP 169
>gi|50511265|dbj|BAD32618.1| mKIAA3024 protein [Mus musculus]
Length = 898
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 291/621 (46%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 294 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 353
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 354 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 412
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 413 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 472
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 473 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 527
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 528 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 587
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 588 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 646
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 647 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 703
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 704 RIQGYEVKYWRHDDKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSAT 763
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 764 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 822
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 823 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 873
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 874 ASTSNACTLSAISTIMISLTA 894
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 243/606 (40%), Gaps = 85/606 (14%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 209 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 267
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 268 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 320
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + +DAG Y C+ + G S+ VIV+ P + P +
Sbjct: 321 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSM 379
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNSTWFNV 228
QV H WT NG I H++ + +S +
Sbjct: 380 DVTVGESIVLPCQVTHDHSLDIVFTWT---FNGHLIDFDKDGDHFERVG--GQDSAGDLM 434
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP-QYNTPADKP 287
++ K +Y + S++ + V A + + G P P + D
Sbjct: 435 IRNIQLKHAGKYVCMVQTSVDKLSV----------AADLIVRGPPGPPEAVTIDEITDTT 484
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
Q +SW P P ++P Y I R +Q+ T+ + +
Sbjct: 485 AQ----------------LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVNTVPDLVDG 526
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + EYE + A N +G G P + E +P+V P V G + +
Sbjct: 527 KTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKS 586
Query: 406 AINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWALIVGL 459
+ +TW E + E ++ GR G+ + + P ++ L+ +R +
Sbjct: 587 ELVITW---ETVPEELQNGRGFGYVVAF----RPHGKMIWMLTVLASADASRYVFRNESV 639
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+P + + VKV +NN GEGP S L + + P KPP+++ + ++ T + V W SP
Sbjct: 640 RPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASP 697
Query: 520 SFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ I GY+V+ W D D I VGN I +L YH+ V A+++ G
Sbjct: 698 IGKNRGRIQGYEVKYWRHD-DKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAG 756
Query: 579 DGRMSS 584
G S+
Sbjct: 757 TGPSSA 762
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 167
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 168 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 224
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 225 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 277
Query: 179 P 179
P
Sbjct: 278 P 278
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG-------PSYYEQLPPK 90
E GNL I+ V + D G Y+C TN H + LI+ + P Q P
Sbjct: 47 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 106
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ ++L C A + + +W +G I + G+LEI N
Sbjct: 107 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR-------HKSNGILEIPNF 157
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 158 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 214
Query: 209 PITHYK 214
P Y+
Sbjct: 215 PKPTYR 220
>gi|355559495|gb|EHH16223.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca mulatta]
gi|355746563|gb|EHH51177.1| Brain-derived immunoglobulin superfamily protein 2 [Macaca
fascicularis]
Length = 1026
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACTLSAISTIMISLTA 1022
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|334335513|ref|XP_003341782.1| PREDICTED: contactin-4 [Monodelphis domestica]
Length = 1027
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 197/623 (31%), Positives = 298/623 (47%), Gaps = 31/623 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + WKK I+ R E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPAYTWKKGKEIVRENERITFSEDGSLRIMNVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
G S G LIV +PP + + ++ L C + LD+ + W+ NG
Sbjct: 482 HFGTASSTGNLIVKDATRLL--VPPSSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHL 539
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + D + E G L I + AG+Y C+V+++V KIS +IV GPPG
Sbjct: 540 IDFDKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKISATADLIVRGPPGP 599
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
P V + E+ T+A + W GA N PIT Y I ART ++ W V + + + +D G
Sbjct: 600 PEAVTIDEITDTTAQLSWRPGADNHSPITMYVIQARTPFSVGWQAV--NTVPELID---G 654
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
R + L PW YEF+V+A N +G GEPS PS + T P P+ + GGGG
Sbjct: 655 RTFTATVVGLNPWVEYEFRVVAANTIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKS 714
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WE +P E QN Y + +R + +T+ + V R S ++ Y
Sbjct: 715 ELVITWETVPEELQNGGGFGYVVAFRPFGKVSWM-QTVLASADASKYVFRNESLPPFSPY 773
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENI 421
EVKV N+ G G S V ++SAE+ P P +F+R ++T I V W +P+E +
Sbjct: 774 EVKVGVYNNKGEGSFSPVTVVYSAEEEPTKPPPSIFARSLSATDIEVFWSSPLETLS--- 830
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
+GR+ G+ +KYW D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 831 KGRIQGYEVKYWSHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPYS 890
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDM 540
T + P +PP + I + + + + W V E + GYKV W
Sbjct: 891 VTVNVTTKKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSST 949
Query: 541 S--RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEE 594
S N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 SVIETNKTSVELSLPFDED---------YIIEIRPFSDGGDGSSSEQIRIPKISSAYARG 1000
Query: 595 KEFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 SGASTSNACTLSAISTIMISLTA 1023
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKQIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A ++ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWNQKI-NDIHVAIEESIFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTQD-------RIQIEHGTLNITTVNLSDAGMYQCVAENRHGIIFASAELSVIALGP 406
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 42 EEKKVKLNCEVKGNPKPLIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G SK +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSKEAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|332688247|ref|NP_001193885.1| contactin-4 isoform d [Homo sapiens]
gi|19913548|gb|AAH26119.1| Contactin 4 [Homo sapiens]
Length = 697
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 213 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 326
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 327 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 386
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 387 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 445
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 446 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 501
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 502 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 561
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 562 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 620
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 621 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 671
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 672 GASTSNACTLSAISTIMISLTA 693
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 147/610 (24%), Positives = 245/610 (40%), Gaps = 84/610 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYKWLKNGEPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L V+ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-- 182
G L E E I+ DG L I N + +DAG Y C+ + G S+ ++V+ P +
Sbjct: 116 GRDILKENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMV 174
Query: 183 -PGGV------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNS 223
P + QV H W + NG I H++ R +S
Sbjct: 175 PPSSMDVTVGESIVLPCQVTHDHSLDIVFTW---SFNGHLIDFDRDGDHFE---RVGGDS 228
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+ ++ K +Y + S++ ++ A +L P P P
Sbjct: 229 AGDLMIRNIQLKHAGKYVCMVQTSVD-----------RLSAAADLIVRGP--PGPPEAVT 275
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKE 342
D+ +++ SW P P ++P Y I R +Q+ T+ E
Sbjct: 276 IDEITDTTAQL------------SWRPGP--DNHSPITMYVIQARTPFSVGWQAVSTVPE 321
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + EYE + A N +G G P + E +P+V P V G
Sbjct: 322 LIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGG 381
Query: 402 FNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWAL 455
+ + + +TW E + E ++ GR G+ + + P ++ L+ +R
Sbjct: 382 GSKSELVITW---ETVPEELQNGRGFGYVVAF----RPYGKMIWMLTVLASADASRYVFR 434
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ P + + VKV +NN GEGP S + + + P KPP+++ + ++ T + V W
Sbjct: 435 NESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFW- 493
Query: 516 YVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
SP + I GY+V+ W +D I VGN I +L YH+ V A+
Sbjct: 494 -ASPLEKNRGRIQGYEVKYWR-HEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAY 551
Query: 575 SNGGDGRMSS 584
++ G G S+
Sbjct: 552 NSAGTGPSSA 561
>gi|449283519|gb|EMC90135.1| Contactin-3, partial [Columba livia]
Length = 908
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 300/618 (48%), Gaps = 20/618 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V C P+A+PK K WKK G + R + ++G L I+ V++ D+G Y+C ATN
Sbjct: 304 GSTVDFECKPKASPKAKCSWKKGGEQLHENERITLLKDGGLRIANVTKVDAGSYTCLATN 363
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G LIV P+ P + + ++ L C + +LD+++ W NG
Sbjct: 364 QFGTASGSTNLIVTE-PTRIILAPSSMDVTVGESVVLPCQVQHDPILDISFTWYFNGTLT 422
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+VK+ V +++ +IV G PG P
Sbjct: 423 DFKKDASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPP 481
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A I W +G N P+T Y + ART ++ W V+ D G+
Sbjct: 482 EHVKVDEITDTTAQISWQEGTDNHSPVTTYTVQARTPFSVGWQRVT-----TVPDVIDGK 536
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 537 TFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSE 596
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 597 LVITWDPIPEELQNGEGFGYVVAFRPYGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYE 655
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP GV + +S+ I V+W I + G
Sbjct: 656 VKVGVYNNKGEGPFSSVTTVFSAEEEPSIAPSGVSATSLSSSVIEVSWTAIPWKMSS--G 713
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + I GL+ + YY V AYN+AG GP S
Sbjct: 714 RLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYTAVRAYNSAGAGPFSAT 773
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + + + V ++W V E + GYKV + + S+
Sbjct: 774 VNATTKKTPPSQPPGNV-MWNVTDSRVILSWEEVRAMENESEVTGYKV----LYRTSSQT 828
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 603
N ++ T + + + Y + V A ++GGDG S + ++ SG
Sbjct: 829 NMNVLNTDKTTAELFLQFN--EDYVIEVKATTDGGDGTSSDQILIPRLASMDARGSGPSV 886
Query: 604 L--YSASTTLLLVMSSTL 619
L +S S+ + ++S T+
Sbjct: 887 LNIFSVSSFVPTILSLTI 904
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + GR +I ENG L IS ++ DSG Y C A N HG+ S
Sbjct: 219 CRASGKPKPSYRWVKNGEQLSVEGRIQI-ENGALTISNLNLTDSGRYQCIAENKHGVIYS 277
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K I + + C ++ + G L
Sbjct: 278 SAELRVVASAPDFSKNPMKKLIQVQIGSTVDFECKPKASPKAKCSW-------KKGGEQL 330
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+E E + DGG L I N + DAG Y C+ + G S T +IV P
Sbjct: 331 HENERITLLKDGG-LRIANVTKVDAGSYTCLATNQFGTASGSTNLIVTEP 379
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 119 AAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 178
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G + ++GRL P + + + +A L C A + +Y W NG
Sbjct: 179 TENSRGKNIARGRLTYYAKPHWIQTI-KDTEVAVEDTLYWDCRASGKP--KPSYRWVKNG 235
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
++ I I+ G L I+N + D+G Y+C+ ++ G I S + V+ P
Sbjct: 236 EQLSVEG-------RIQIENGALTISNLNLTDSGRYQCIAENKHGVIYSSAELRVVASAP 288
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 24/225 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P A F W + + + RR + E G+L I+ V D G Y+
Sbjct: 16 EGQGVVLLCGPPPRAGDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVDPSDVGNYT 75
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + ++ G P Q P + A ++L C A
Sbjct: 76 CVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 135
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + T + L + G++EI N DAG YEC+ +++ GK
Sbjct: 136 VPQINWRRTDGLPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECITENSRGKNI 187
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P ++ EV T+ W D +G+P Y+
Sbjct: 188 ARGRLTYYAKPHWIQTIKDTEV-AVEDTLYW-DCRASGKPKPSYR 230
>gi|344276063|ref|XP_003409829.1| PREDICTED: contactin-4 [Loxodonta africana]
Length = 1004
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 197/622 (31%), Positives = 303/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R + E+G+L I V++ D+G Y+C ATN
Sbjct: 401 GGEVIIECKPKASPKPVYTWKKGRDIVRENERIIVSEDGSLRIINVTKSDAGSYTCIATN 460
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 461 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGRLI 519
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
N D + E + G L+ I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 520 DFNKDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPP 578
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 579 EAVSIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 633
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 634 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 693
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ +E
Sbjct: 694 LVITWETVPEELQNGGGFGYVVAFRPYGKKSWM-KTVMASADASRYVFRNESLSPFSPFE 752
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G G S + T++SAE+ P P +F+R ++T I V W +P+E +NI
Sbjct: 753 VKVGVFNNKGEGLFSPITTVYSAEEEPTKPPPSIFARSLSATDIEVFWASPLE---KNI- 808
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + I L+ Y++ V AYN+AG GP S
Sbjct: 809 GRIQGYEVKYWRHDDKEENARKIRTIGNHTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 868
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 869 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 927
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 928 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 978
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 979 GASTSNACTLSAISTIMISLTA 1000
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 216 AAKGTTVKLECFALGNPVPTIIWRRVDGKPIARKARRHK-SNGILEIPNFQQEDAGLYEC 274
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ +++ I +A N+ C A+ Y W N
Sbjct: 275 VAENSRGKNVAKGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKN 331
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G+L +T + +DAG Y+CV ++ G I S + +VI G
Sbjct: 332 GEPLLTQD-------RIQIEQGMLNMTTVNLSDAGMYQCVAENKHGVIFASAELSVIAVG 384
Query: 179 P 179
P
Sbjct: 385 P 385
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + IG R + E L+ +P D+G Y C
Sbjct: 21 EEKKVRLSCEVKGNPKPHIRWKLNGTVVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 80
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H EL +Y W
Sbjct: 81 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHAGEL---SYAWI 137
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 138 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 179
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 180 TNHKVLGPP 188
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 72/185 (38%), Gaps = 22/185 (11%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG-------PSYYEQLPPK 90
E GNL I+ V + D G Y+C TN H + LI+ + P Q P
Sbjct: 154 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 213
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A ++L C A + + IW +G I + G+LEI N
Sbjct: 214 VPAAKGTTVKLECFALGNPVPTI--IWRRVDGKPIARKARR-------HKSNGILEIPNF 264
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
DAG YECV +++ GK K + P + + V + W + NGRP
Sbjct: 265 QQEDAGLYECVAENSRGKNVAKGQLTFYAQPNWIQKINDIHV-AIEENVFW-ECKANGRP 322
Query: 210 ITHYK 214
Y+
Sbjct: 323 KPTYR 327
>gi|390475265|ref|XP_003734927.1| PREDICTED: contactin-4 [Callithrix jacchus]
Length = 697
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 213 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 326
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 327 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 386
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 387 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 445
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 446 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 501
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 502 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 561
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 562 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 620
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 621 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 671
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 672 GASTSNACTLSAISTIMISLTA 693
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 246/610 (40%), Gaps = 84/610 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYRWLKNGEPLLTQDRIQI-EQGTLNITVVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L ++ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELNVIAVGPDFSRTLLKRLTLVKVGGEVVIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-- 182
G L E E I+ DG L I N + +DAG Y C+ + G S+ ++V+ P +
Sbjct: 116 GRDILKENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMV 174
Query: 183 -PGGV------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNS 223
P + QV H W + NG I H++ R +S
Sbjct: 175 PPSSMDVTVGESIVLPCQVTHDHSLDIVFTW---SFNGHLIDFDRDGDHFE---RVGGDS 228
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+ ++ K +Y + S++ ++ A +L P P P
Sbjct: 229 AGDLMIRNIQLKHAGKYVCMVQTSVD-----------RLSAAADLIVRGP--PGPPEAVT 275
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKE 342
D+ +++ SW P P ++P Y I R +Q+ T+ E
Sbjct: 276 IDEITDTTAQL------------SWRPGP--DNHSPITMYVIQARTPFSVGWQAVSTVPE 321
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + EYE + A N +G G P + E +P+V P V G
Sbjct: 322 LIDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGG 381
Query: 402 FNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWAL 455
+ + + +TW E + E ++ GR G+ + + P ++ L+ +R
Sbjct: 382 GSKSELVITW---ETVPEELQNGRGFGYVVAF----RPYGKMIWMLTVLASADASRYVFR 434
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
++P + + VKV +NN GEGP S + + + P KPP+++ + ++ T + V W
Sbjct: 435 NESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFW- 493
Query: 516 YVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
SP + I GY+V+ W +D I VGN I +L YH+ V A+
Sbjct: 494 -ASPLEKNRGRIQGYEVKYWR-HEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAY 551
Query: 575 SNGGDGRMSS 584
++ G G S+
Sbjct: 552 NSAGTGPSSA 561
>gi|390475267|ref|XP_002758615.2| PREDICTED: contactin-4 isoform 1 [Callithrix jacchus]
Length = 1025
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 599
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 600 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 654
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 655 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 714
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 715 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 773
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 774 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 829
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 830 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 889
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 890 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 948
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 949 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 999
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1000 GASTSNACTLSAISTIMISLTA 1021
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ + +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDVHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + VI GP
Sbjct: 354 EPLLTQD-------RIQIEQGTLNITVVNLSDAGMYQCLAENKHGVIFSNAELNVIAVGP 406
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|441665500|ref|XP_004091814.1| PREDICTED: contactin-4 [Nomascus leucogenys]
Length = 697
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 94 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCVATN 153
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 154 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 212
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 213 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 271
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 272 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 326
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 327 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 386
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 387 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 445
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 446 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 501
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 502 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 561
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 562 IVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 620
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 621 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 671
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 672 GASTSNACTLSAISTIMISLTA 693
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 4 NVFWECKANGRPKPTYRWLKNGEHLQTRDRIQI-EQGTLNITMVNLSDAGMYQCLAENKH 62
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L V+ GP + L ++T + + + C Y W +
Sbjct: 63 GVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KK 115
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L E E I+ DG L I N + +DAG Y CV + G S+ ++V+ P
Sbjct: 116 GRDILKENERITISEDGN-LRIINVTKSDAGSYTCVATNHFGTASSTGNLVVKDP 169
>gi|213982949|ref|NP_001135636.1| contactin 4 precursor [Xenopus (Silurana) tropicalis]
gi|197246317|gb|AAI68488.1| Unknown (protein for MGC:172944) [Xenopus (Silurana) tropicalis]
Length = 1028
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 266/528 (50%), Gaps = 11/528 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+V I C P+A+PKP WKK + R I ++G L IS +++ D+G Y+CTA+N
Sbjct: 423 GGSVLIECKPKASPKPSITWKKGKELQRESSRISILDDGTLKISNLTKADAGSYTCTASN 482
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+++ W NG I
Sbjct: 483 HFGTASSTGTLVV-KDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQLI 541
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E G L I + AG+Y C+V ++V K+S +IV GPPG P
Sbjct: 542 DFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ V E+ T+A + W G N PI Y + ART ++ W VS + + VD GR
Sbjct: 602 DALTVEEITDTTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVS--TVPEVVD---GR 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+VIA NE+G GEPS PS + T P P+ + GGGG G+
Sbjct: 657 SFTATVVGLSPWVEYEFRVIAINEIGIGEPSPPSDKRRTEEALPEVTPANVSGGGGSKGE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 717 LVITWEPVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASADSSRYVYRNESLPPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S + ++SAE+ P AP GVFSR + I V+W I + +G
Sbjct: 776 VKVGVYNNRGEGPFSPLTVVYSAEEEPGRAPAGVFSRSLTAWDIEVSW--IAVPGSLSKG 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ ++YWK++ E+ A + + + LQ T Y++ V AYN+AG GP S
Sbjct: 834 RIQGYEVRYWKQNEKEQNARKLRTLGNQTSTKLSHLQGHTLYHLNVRAYNSAGTGPASTT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
T + P +PP + N + + + W V+ +E + GY+V
Sbjct: 894 VNVTTRKPPPSQPPGNIIWNSSN-SKIILNWDQVTAQEDESEVKGYRV 940
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 150/614 (24%), Positives = 245/614 (39%), Gaps = 90/614 (14%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
N+ C PK + W K+G + S GR +I ++G+L I+ V+ DSG+Y C A N H
Sbjct: 333 NILWECKASGRPKASYTWLKNGQRLQSKGRLQI-DHGSLTITSVNISDSGMYQCLAENKH 391
Query: 67 GMDESKGRLIVLH-GPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S L V+ GP + + ++T+ ++ + C + + G +
Sbjct: 392 GTIYSSAELRVIAVGPDFSKGFVKRVTLGKVGGSVLIECKPKASPKPSITW---KKGKEL 448
Query: 125 GNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL- 182
+ E+ I+I D G L+I+N + ADAG Y C + G S+ T++V+ P +
Sbjct: 449 ------QRESSRISILDDGTLKISNLTKADAGSYTCTASNHFGTASSTGTLVVKDPTQVL 502
Query: 183 --PGGV------------QVVEVHKTSATIQWTDGATNGRPIT------HYKIIARTNWN 222
P + QV H + W NG+ I H++ +
Sbjct: 503 VPPSSMDVTVGESIVLPCQVSHDHSLDISFSW---VFNGQLIDFQKDGEHFERVG----- 554
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ G + R K A LV T K+ AG +L P P
Sbjct: 555 ------GQDSAGDLMIRSIQLKHAGKYICLV--HTSVDKLSAGADLIVRGPPGPPDALTV 606
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLK 341
+I D + +P ++P I Y + R +Q+ T+
Sbjct: 607 E----------------EITDTTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVSTVP 650
Query: 342 EY--GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG 396
E G A V S + E+ V AIN++G P P S+ + E +P+V P
Sbjct: 651 EVVDGRSFTATVVGLSPWVEYEFRVI--AINEIGIGEPSPPSD--KRRTEEALPEVTPAN 706
Query: 397 VFSRGFNSTAINVTWNPI--ELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTT 450
V G + + +TW P+ EL G ++ R I + + + Y+ R
Sbjct: 707 VSGGGGSKGELVITWEPVPEELQNGGGFGYVVAFRPFGTISWMQTVVASADSSRYVYRNE 766
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
L P + Y VKV YNN GEGP S + + + P + P+ V + + +
Sbjct: 767 -------SLPPFSPYEVKVGVYNNRGEGPFSPLTVVYSAEEEPGRAPAGVFSRSLTAWDI 819
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
V+W V S + I GY+VR W+ ++ A + +GN + L YH+
Sbjct: 820 EVSWIAVPGSLSKGRIQGYEVRYWKQNEKEQNARK-LRTLGNQTSTKLSHLQGHTLYHLN 878
Query: 571 VLAFSNGGDGRMSS 584
V A+++ G G S+
Sbjct: 879 VRAYNSAGTGPAST 892
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ DG I RR +G L I ++D+G Y C
Sbjct: 238 SAKGSTVKLECFALGNPVPTITWRRADGKPISRKVRRH-RSSGVLEIPNFQQEDAGPYEC 296
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L P++ +++ IA N+ C A +Y W N
Sbjct: 297 VAENTRGKNMVRGQLTYFAPPTWVQKI-NDAHIAIEENILWECKASGRP--KASYTWLKN 353
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G R+ + + ID G L IT+ + +D+G Y+C+ ++ G I S + VI G
Sbjct: 354 GQRLQSKG-------RLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVG 406
Query: 179 PPGLPGGVQVVEVHKTSATI 198
P G V+ V + K ++
Sbjct: 407 PDFSKGFVKRVTLGKVGGSV 426
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E + + C + PKP W+ +G ++ R ++ + ++ SP D G + C
Sbjct: 41 EDRTLRLVCEVQGHPKPVVRWRVNGTLMDEAQDYRYRVLDRSLIIASPDRNRDVGTFQCE 100
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ + + S+ + +++ + + L C AH+ EL+ Y W
Sbjct: 101 ATNSLGTILSREAYVQFSYLDSFQTRTRSTVSVREGQGMVLLCGPPAHSGELV---YAWI 157
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N N + G L I +DAG Y CVV +TV
Sbjct: 158 FNEYPPFVQQDNRRFVSQVT---GNLYIAKVEPSDAGNYTCVVTNTV 201
>gi|348575437|ref|XP_003473495.1| PREDICTED: LOW QUALITY PROTEIN: contactin-4-like [Cavia porcellus]
Length = 1026
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 296/621 (47%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ N I
Sbjct: 482 HFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
N D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFNKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W + +N RG
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPLGKN-RG 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ ++ EE A + + I LQ Y++ V AYN+AG GP S
Sbjct: 832 RIQGYEVKYWRHNDKEENARKIRTVGNQTSTKITNLQGSALYHLAVKAYNSAGTGPSSAT 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 892 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 950
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + +D D Y + + FS+GGDG S P I+
Sbjct: 951 IETNKTSVELSLPVDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 1001
Query: 597 FKSGSPALYSASTTLLLVMSS 617
S + SA +T+++ +++
Sbjct: 1002 ASSSNACTLSAISTIMISLTA 1022
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIAWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A + C A+ + Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEEKVFWECKANGKP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E P
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIGECP 406
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 42 EDKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSLVEGSLLINNPNKTQDTGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
A+N G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ASNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 20/184 (10%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG-------PSYYEQLPPK 90
E GNL I+ V + D G Y+C TN H + LI+ + P P
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPET 234
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150
+ A ++L C A + +A+ +G I + G+LEI N
Sbjct: 235 VPTAKGATVKLECFALGNPVPTIAW-RRADGKPIA-------RKARRHKSNGILEIPNFQ 286
Query: 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
DAG YECV +++ GK + + P + ++H + + NG+P
Sbjct: 287 QEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKIN--DIHVAMEEKVFWECKANGKPK 344
Query: 211 THYK 214
Y+
Sbjct: 345 PTYR 348
>gi|395824569|ref|XP_003785535.1| PREDICTED: contactin-4, partial [Otolemur garnettii]
Length = 1013
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 193/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +++ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 409 GGEVVIECKPKASPKPVYTWKKGRDVLRENERITISEDGNLRIVNVTKPDAGSYTCIATN 468
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 469 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 527
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 528 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 587
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 588 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 642
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 643 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSERRRTEEALPEVTPANVSGGGGSKSE 702
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 703 LVITWETVPEELQNGRGFGYVVAFRPYGKMSWMLTVLAS-ADASRYVFRNESVRPFSPFE 761
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SA++ P P +F+R ++T I V W +P+ E R
Sbjct: 762 VKVGVFNNKGEGPFSPPTVVYSADEEPTKPPANIFARSLSATDIEVFWASPL----EKNR 817
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 818 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 877
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 878 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 936
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 937 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 987
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 988 GASTSNACTLSAISTIMISLTA 1009
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P W++ D I RR NG L I ++D+G+Y C
Sbjct: 225 AKGATVKLECFALGNPVPTITWRRADSKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 283
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 284 AENSRGKNVARGQLTFYAQPNWIQKI-SDIHVAMEENVFWECKANGRP--KPTYRWLKNG 340
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + VI GP
Sbjct: 341 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGIIFSSAELNVIAVGP 393
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + G R + E L+ +P D+G Y C
Sbjct: 29 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDMGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 88
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 89 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 145
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 146 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 187
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 188 TNHKVLGPP 196
>gi|281346450|gb|EFB22034.1| hypothetical protein PANDA_004020 [Ailuropoda melanoleuca]
Length = 1021
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 296/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 417 GGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLKIVNVTKSDAGSYTCIATN 476
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 477 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 535
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 536 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPP 595
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 596 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 650
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 651 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 710
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 711 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 769
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 770 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 825
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 826 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 885
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 886 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNKQSSTS 944
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 945 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 995
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 996 GPSTSNACTLSAISTIMISLTA 1017
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 233 AKGTTVRLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 291
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 292 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 348
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 349 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 401
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 37 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCI 96
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C AH+ EL +Y W
Sbjct: 97 ATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGEL---SYAWI 153
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 154 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 195
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 196 TNHKVLGPP 204
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 24/224 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 131 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 190
Query: 62 ATNV---HGMDESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
TN H + LI+ + P P + A ++L C A +
Sbjct: 191 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPTAKGTTVRLECFALGNPVP 250
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 251 TI--IWRRADGKPIARKARR-------HKSNGILEIPNFQQEDAGLYECVAENSRGKNVA 301
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P + + V + W + NGRP Y+
Sbjct: 302 RGQLTFYAQPNWIQKINDIHV-AIEENVFW-ECKANGRPKPTYR 343
>gi|354473112|ref|XP_003498780.1| PREDICTED: contactin-4 [Cricetulus griseus]
Length = 1017
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 295/621 (47%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 413 GGEVIIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 472
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 473 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 531
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K++ +IV GPPG P
Sbjct: 532 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPP 591
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + VD G+
Sbjct: 592 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GK 646
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 647 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 706
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 707 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 765
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 766 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 822
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 823 RIQGYEVKYWRHDDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSAT 882
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 883 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 941
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 942 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 992
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 993 ASTSNACTLSAISTIMISLTA 1013
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR +G L I ++D+G Y C
Sbjct: 228 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SDGILEIPNFQQEDAGSYEC 286
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+LI P++ +++ I +A ++ C A+ Y W N
Sbjct: 287 VAENSRGKNIAKGQLIFYAQPNWVQKI-NDIHVAMEESVFWECKANGRP--KPTYRWLKN 343
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 344 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 396
Query: 179 P 179
P
Sbjct: 397 P 397
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 33 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 92
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 93 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 149
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 150 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 191
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 192 TNHKVLGPP 200
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 166 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 225
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 226 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR-------HKSDGILEIPNF 276
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
DAG YECV +++ GK K +I P + + V ++ W + NGRP
Sbjct: 277 QQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHV-AMEESVFW-ECKANGRP 334
Query: 210 ITHYK 214
Y+
Sbjct: 335 KPTYR 339
>gi|403270507|ref|XP_003927218.1| PREDICTED: contactin-4 [Saimiri boliviensis boliviensis]
Length = 1004
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 298/622 (47%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 401 GGEVVIECKPKASPKPAYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 460
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 461 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 519
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 520 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 578
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+ + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 579 EAVTIDEITDTTVQLSWIPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 633
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 634 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 693
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 694 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 752
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 753 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 808
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 809 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 868
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 869 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 927
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 928 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 978
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 979 GASTSNACTLSAISTIMISLTA 1000
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 353
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 22/185 (11%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG-------PSYYEQLPPK 90
E GNL I+ V + D G Y+C TN H + LI+ + P Q P
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A ++L C A + + IW +G I + G+LEI N
Sbjct: 235 VPTAKGATVKLECFALGNPVPTI--IWRRADGKPIARKARR-------HKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
DAG YECV +++ GK + + P + + V + W + NGRP
Sbjct: 286 QQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHV-AMEENVFW-ECKANGRP 343
Query: 210 ITHYK 214
Y+
Sbjct: 344 KPTYR 348
>gi|402859558|ref|XP_003894221.1| PREDICTED: contactin-4-like, partial [Papio anubis]
Length = 622
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R + E+GNL I V++ D+G Y+C ATN
Sbjct: 19 GGEVVIECKPKASPKPVYTWKKGRDILKENERITVSEDGNLRIINVTKSDAGSYTCIATN 78
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 79 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 137
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 138 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 196
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 197 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 251
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 252 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 311
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 312 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 370
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 371 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 426
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 427 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 486
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 487 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 545
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 546 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 596
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 597 GASTSNACTLSAISTIMISLTA 618
>gi|9506949|ref|NP_062202.1| contactin-3 precursor [Rattus norvegicus]
gi|55976163|sp|Q62682.1|CNTN3_RAT RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
Flags: Precursor
gi|563133|gb|AAA63607.1| BIG-1 protein [Rattus norvegicus]
Length = 1028
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 285/580 (49%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R + +G L I V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W NV + + +D T R
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQNV--RTVPEAIDGKT-R 658
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+E L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +
Sbjct: 659 TATVVE--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + A++ GL+ + YY V AYN AG GP S
Sbjct: 834 RLLGYEVRYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L I+ ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTIANLNVSDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L VL + + P K + + + L + SA L W + G+
Sbjct: 398 SAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRAL----SFW-----KKGDT 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 449 VVREQARISLLNDGG-LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEP 499
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ ++++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|291408740|ref|XP_002720672.1| PREDICTED: contactin 4-like [Oryctolagus cuniculus]
Length = 1049
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 299/623 (47%), Gaps = 33/623 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG I CNP+A+PKP + WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 446 GGEAAIECNPKASPKPVYTWKKGRDVLRESERITISEDGDLRIVNVTKADTGSYTCIATN 505
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG R+
Sbjct: 506 HFGTASSTGNLVV-KDPTRVTVPPSSMDVTVGESIVLPCQVTHDHSLDIVFAWSFNG-RL 563
Query: 125 GNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + + D G L I N AG Y C+V+++V ++S ++V GPPG P
Sbjct: 564 IDFDKDGDHFERVGGDSAGDLMIRNIQLTHAGRYVCMVQTSVDRLSVTADLVVRGPPGPP 623
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ ++A + W G N P+T Y I ART ++ W VS + + +D GR
Sbjct: 624 EAVTIDEITDSTAQLSWRPGPDNHSPVTTYIIQARTPFSVGWQAVS--TVPELID---GR 678
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 679 TFTATVVGLSPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 738
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 739 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADACRYVFRNESVRPFSPFE 797
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SA++ P P +F+R ++T I V W +P+ E R
Sbjct: 798 VKVGVFNNKGEGPFSPPTVVYSADEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 853
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I LQ Y++ V AYN+AG GP S
Sbjct: 854 GRIQGYEVKYWRHEDKEENARKIRTIGNQTSTTITNLQGSALYHLAVKAYNSAGTGPASA 913
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 914 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALENESEVKGYKVLYRWSRQSSTS 972
Query: 542 --RANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEE 594
N T + + D D IV++ P FS GGDG S P I+
Sbjct: 973 VIETNKTSVELSLPFDEDYIVEIRP----------FSEGGDGSSSEQIRIPKISNAYARG 1022
Query: 595 KEFKSGSPALYSASTTLLLVMSS 617
+ S SA +T++L +++
Sbjct: 1023 SGAATPSACTLSAISTIMLSLTA 1045
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 145/602 (24%), Positives = 241/602 (40%), Gaps = 78/602 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N HG S
Sbjct: 361 CRANGRPKPTYRWLKNGEPLLTRDRIQI-EQGTLNITVVNLSDAGMYQCVAENEHGAAFS 419
Query: 72 KGRL-IVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ GP + L ++T+ + C+ Y W + G L
Sbjct: 420 SAELRVIAAGPDFSRTLLKRVTLVRVGGEAAIECNPKASP--KPVYTW-----KKGRDVL 472
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + AD G Y C+ + G S+ ++V+ P + P +
Sbjct: 473 RESERITISEDGD-LRIVNVTKADTGSYTCIATNHFGTASSTGNLVVKDPTRVTVPPSSM 531
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEH 231
QV H W+ NGR I K R +S + +
Sbjct: 532 DVTVGESIVLPCQVTHDHSLDIVFAWS---FNGRLIDFDKDGDHFERVGGDSAGDLMIRN 588
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ RY + S++ + V T + V+ G P P D+ +
Sbjct: 589 IQLTHAGRYVCMVQTSVDRLSV---TADL-VVRG---------PPGPPEAVTIDEITDST 635
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
++ +SW P P ++P Y I R +Q+ T+ E +
Sbjct: 636 AQ------------LSWRPGP--DNHSPVTTYIIQARTPFSVGWQAVSTVPELIDGRTFT 681
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + EYE + A N +G G P + E +P+V P V G + + + +
Sbjct: 682 ATVVGLSPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI 741
Query: 410 TWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV-----GLQPDT 463
TW E + E ++ GR G+ + + P ++ L+ A ++P +
Sbjct: 742 TW---ETVPEELQNGRGFGYVVAF----RPYGKMIWMLTVLASADACRYVFRNESVRPFS 794
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
+ VKV +NN GEGP S + + + P KPP+++ + ++ T + V W SP +
Sbjct: 795 PFEVKVGVFNNKGEGPFSPPTVVYSADEEPTKPPASIFARSLSATDIEVFW--ASPLEKN 852
Query: 524 E-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
I GY+V+ W +D I +GN I +L YH+ V A+++ G G
Sbjct: 853 RGRIQGYEVKYWR-HEDKEENARKIRTIGNQTSTTITNLQGSALYHLAVKAYNSAGTGPA 911
Query: 583 SS 584
S+
Sbjct: 912 SA 913
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G V + C P P W++ DG + RR +G L I ++D+G+Y C A
Sbjct: 264 GATVKLECFALGNPVPTITWRRADGKPLARKSRRHK-SSGVLEIPNFQQEDAGLYECVAE 322
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + +G+L PS+ +++ I +A ++ C A+ Y W NG
Sbjct: 323 NSRGKNVVRGQLTFYAQPSWIQKI-NDIHVAMEESVFWECRANGRP--KPTYRWLKNGEP 379
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G S + VI GP
Sbjct: 380 LLTRD-------RIQIEQGTLNITVVNLSDAGMYQCVAENEHGAAFSSAELRVIAAGP 430
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C E PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 66 EERKVKLSCEAEGTPKPLIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCI 125
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C+ H+ EL +Y W
Sbjct: 126 ATNSFGTVVSREAKLQFAYLENFRTRTRSTVSVRRGQGMVLLCAPPPHSGEL---SYAWI 182
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N R D ++ + G L I +D G Y CVV +TV T V G
Sbjct: 183 FNE-RPSYQDSRRF----VSQETGNLYIAKVEPSDVGNYTCVVTNTV------TNQRVLG 231
Query: 179 PP 180
PP
Sbjct: 232 PP 233
>gi|395733521|ref|XP_002813554.2| PREDICTED: LOW QUALITY PROTEIN: contactin-4 isoform 2 [Pongo abelii]
Length = 1026
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 299/622 (48%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C A+N
Sbjct: 423 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIASN 482
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 483 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 541
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 542 DFDRDGDHFERVGGDSAGDLM-IRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACTLSAISTIMISLTA 1022
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 239 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 297
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 298 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 354
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + VI GP
Sbjct: 355 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELNVIAVGP 407
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + KP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 43 EEKKVKLNCEVKEIQKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 102
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 103 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 159
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 160 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 201
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 202 TNHKVLGPP 210
>gi|118097058|ref|XP_414435.2| PREDICTED: contactin-4 [Gallus gallus]
Length = 1029
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 299/622 (48%), Gaps = 29/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + WKK +I+ R + ++G+L I V++ D+G Y+C ATN
Sbjct: 424 GGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDTGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 484 HFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLI 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E G L I + AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 543 DFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 602
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W GA N PIT Y + ART ++ W VS + + +D G+
Sbjct: 603 EDVTIDEITDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVS--TVPEVID---GK 657
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N +G GEPS PS T P P+ + GGGG +
Sbjct: 658 TFTATVVGLNPWVEYEFRVVAANLIGIGEPSRPSENRRTEEALPEVTPANVSGGGGSKSE 717
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 718 LVITWETVPEELQNGGGFGYVVAFRPFGTISWM-QTVVASPDASRYVFRNESLPPFSPYE 776
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI-R 422
VKV N+ G G S V ++SAE+ P AP V +R ++T I ++W P REN +
Sbjct: 777 VKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPITVLARSLSATDIEISWAP---PRENQHK 833
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ ++ W+ D EE A + + A + LQ + Y++ V AYN AG GP S
Sbjct: 834 GRIQGYEVRCWRHDEKEENARKIRTVGNQTSAKVTNLQGNALYHLAVKAYNTAGTGPSSA 893
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 894 MVNVTTKKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSAS 952
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 953 VIETNRTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGG 1003
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1004 SSSTSNACTLSAISTIMISLTA 1025
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ DG I RR NG L I ++D+G+Y C
Sbjct: 239 SAKGTAVKLECFALGNPVPTISWRRADGKQIPRKARRH-RSNGLLEIPNFQQEDAGLYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A NV G + ++G+L P++ +++ + A N+ C H +Y W +
Sbjct: 298 VAENVRGKNVARGQLTFYAQPNWIQKI-SDVHAAIEENVFWEC--HASGRPKPSYRWLKD 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L + I+ G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 355 GEPL-------LPQGRVQIEQGSLTIRNVSLSDAGMYQCVAENRHGTIFASAELSVIAVG 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 80/187 (42%), Gaps = 27/187 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFENGNLLIS-PVSRDDSGIYSC 60
E V + C + P+P WK +G NI IG R + E GNLLI+ P D+G Y C
Sbjct: 42 EEKKVKLNCEVKGNPRPTIGWKLNGTNIDIGMDYRYSMVE-GNLLINNPNRTQDTGTYQC 100
Query: 61 TATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIW 117
ATN G S+ +L + ++ ++ +++ + + L C H+ EL Y W
Sbjct: 101 VATNPFGRIISREAKLQFAYLENFKTRVRSTVSVRQGQGMVLLCGPPPHSGEL---TYAW 157
Query: 118 THNG----VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
N V N ET N L I +D G Y CVV +TV T
Sbjct: 158 IFNEYPSFVHQDNRRFVSQETGN-------LYIAKVEASDVGNYTCVVTNTV------TN 204
Query: 174 VIVEGPP 180
V GPP
Sbjct: 205 SRVLGPP 211
>gi|410951600|ref|XP_003982482.1| PREDICTED: contactin-4, partial [Felis catus]
Length = 1021
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 296/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 417 GGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLRIVNVTKSDAGSYTCVATN 476
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 477 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 535
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 536 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 595
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 596 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 650
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 651 TFTAAVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 710
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 711 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 769
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 770 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 825
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 826 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 885
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 886 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 944
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 945 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSPSEQIRIPKISNAYARGA 995
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 996 GPSTSNACTLSAISTIVISLTA 1017
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR +G L I ++D+G+Y C
Sbjct: 233 AKGTTVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SSGILEIPNFQQEDAGLYECV 291
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ +A N+ C A+ Y W NG
Sbjct: 292 AENSRGKNVARGQLTFYAQPNWIQEI-NDTHVAIEENVFWECKANGRP--KPTYRWLKNG 348
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G+L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 349 EPLFTRD-------RIQIEQGMLNITVVNLSDAGMYQCVAENKHGVIFSSAELSVIAAGP 401
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 11/175 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV C PKP + W K+G + + R +I E G L I+ V+ D+G+Y C A N H
Sbjct: 327 NVFWECKANGRPKPTYRWLKNGEPLFTRDRIQI-EQGMLNITVVNLSDAGMYQCVAENKH 385
Query: 67 GMDESKGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S L ++ GP + L ++T + + + C Y W +
Sbjct: 386 GVIFSSAELSVIAAGPDFSRTLLKRVTLVKVGGEVVIECKPKASP--KPVYTW-----KK 438
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L E E I+ DG L I N + +DAG Y CV + G S+ ++V+ P
Sbjct: 439 GRDILRENERITISEDGS-LRIVNVTKSDAGSYTCVATNHFGTASSTGNLVVKDP 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 37 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCI 96
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C AH+ EL +Y W
Sbjct: 97 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGEL---SYAWI 153
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 154 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 195
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 196 TNHKVLGPP 204
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 30/227 (13%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 131 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 190
Query: 62 ATNV---HGMDESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
TN H + LI+ + P Q P + A ++L C A +
Sbjct: 191 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPEMVPTAKGTTVKLECFALGNPVP 250
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 251 TI--IWRRADGKPIARKARRHKSS-------GILEIPNFQQEDAGLYECVAENSRGKNVA 301
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQ---WTDGATNGRPITHYK 214
+ + P + E++ T I+ + + NGRP Y+
Sbjct: 302 RGQLTFYAQPNW-----IQEINDTHVAIEENVFWECKANGRPKPTYR 343
>gi|449474272|ref|XP_002186724.2| PREDICTED: contactin-3, partial [Taeniopygia guttata]
Length = 916
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 261/528 (49%), Gaps = 12/528 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V C P+A PK K WKK G + R + ++G L I+ V++ D+G Y+C ATN
Sbjct: 324 GSTVDFECKPKAFPKAKRSWKKGGEQLQENERISLLKDGGLRIANVTKGDAGSYTCLATN 383
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + + ++ L C + LLD+++ W NG
Sbjct: 384 QFGTARGSTSLVVTE-PTRITLAPSNMDVTVGESVVLPCQVQHDPLLDISFTWYFNGTLT 442
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+VK+ V +++ +IV G PG P
Sbjct: 443 DFQRDASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPP 501
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V EV T+A I W +G N P+T Y I ART ++ W + D G+
Sbjct: 502 EHVRVDEVTDTTAQISWQEGTDNHSPVTTYSIQARTPFSVGWQRAT-----TVPDVIDGK 556
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
S L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 557 TFTSTVVDLNPWVEYEFRVVATNKIGGGEPSLPSEKVRTEEAVPEIPPSEVSGGGGSRSE 616
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 617 LVITWDPVPEELQNGEGFGYVVAFRPSGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYE 675
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P AP GV + +S+AI V+W I N G
Sbjct: 676 VKVGVYNNKGEGPFSAVATVFSAEEEPSTAPSGVSATSLSSSAIQVSWTAIPWKMSN--G 733
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW + EE++ + I GL+ + YY V AYN+AG GP S
Sbjct: 734 RLLGYEVRYWNKGQKEESSNRVKAAGNETSIKITGLRSNLAYYTAVRAYNSAGAGPFSAT 793
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
T + P +PP V + + + V ++W V E + GYKV
Sbjct: 794 VNATTKKPPPSQPPGNV-VWNVTDSRVVLSWEEVRAMDNESEVTGYKV 840
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + GR +I ENG L IS ++ DSG Y C A N HG+ S
Sbjct: 239 CRASGKPKPSYRWLKNGEQLAIEGRIQI-ENGALTISNLNLTDSGRYQCIAENKHGVISS 297
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K I + + C A+ + G L
Sbjct: 298 SAELRVVASAPDFSKSPMKKLIQVQIGSTVDFECKPK-------AFPKAKRSWKKGGEQL 350
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L I N + DAG Y C+ + G T+++V P
Sbjct: 351 QENERISLLKDGG-LRIANVTKGDAGSYTCLATNQFGTARGSTSLVVTEP 399
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 139 AAKGSTVKLECFALGNPVPQINWRRTDGLPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 198
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G + ++GRL P + + + + +A L C A + +Y W NG
Sbjct: 199 TENSRGKNIARGRLTYYAKPHWIQTI-KDMEVAVEDTLYWDCRASGKP--KPSYRWLKNG 255
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ +E I I+ G L I+N + D+G Y+C+ ++ G IS+ + V
Sbjct: 256 EQLA------IEG-RIQIENGALTISNLNLTDSGRYQCIAENKHGVISSSAELRV 303
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 24/225 (10%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P A F W + + + RR + E G+L I+ V D G YS
Sbjct: 36 EGQGVVLLCGTPPRAGDMSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYS 95
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T+ G L + P Q P + A ++L C A
Sbjct: 96 CVVTSRASSSPVLGSPTPLVLRTDGVMGEYEPKIEVQFPETMAAAKGSTVKLECFALGNP 155
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + T + L + G++EI N DAG YEC+ +++ GK
Sbjct: 156 VPQINWRRTDGLPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECITENSRGKNI 207
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P ++ +EV T+ W D +G+P Y+
Sbjct: 208 ARGRLTYYAKPHWIQTIKDMEV-AVEDTLYW-DCRASGKPKPSYR 250
>gi|348510473|ref|XP_003442770.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
Length = 1076
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 302/627 (48%), Gaps = 31/627 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A+P +WKK I+ R + +G L I+ V++ D+ Y+C
Sbjct: 425 ARSGSEVTLECKPQASPPAISLWKKGNEILQRTERIALLPDGTLKIANVTKRDAASYTCI 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + GRLIV P+ P + I ++ L C ++ LDV++ W NG
Sbjct: 485 AKNQFGTASTTGRLIVTE-PTRITMRPTNMEIIVGESIVLPCQIASDPALDVSFSWAFNG 543
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D + E +I G L+ I N G+Y CV+ + V +ST ++V+GPP
Sbjct: 544 QLIDFQRDSDHFERVGGSISGDLM-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKGPP 602
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V V E+ ++A + WT G NG PIT Y + ART + W + +
Sbjct: 603 GPPDKVSVEEITDSTAQLSWTPGRDNGSPITGYIVQARTPFTVGW-----QAVDTVPEVV 657
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + L W YEF+V+A N +G GEPS S + T P AP+ +GGGGG
Sbjct: 658 NGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGT 717
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WEP+P E QN Y I +R + + + V R + ++
Sbjct: 718 KSELVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVIST--SAARYVFRNDTIPPFS 775
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV A N+ G GP S + ++SAE++P VAP+ V +R ++ I V+W + I E
Sbjct: 776 PFDVKVGAYNNRGEGPFSSIAVVYSAEEVPSVAPKRVRARSVSAAQIEVSWEALPTIPE- 834
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEG 478
R++G+ + YW++D +T R + N+ L I GL+ +T YY+ V A+N AG G
Sbjct: 835 ---RVLGYEVMYWEDDTKPDTIGKV--RLSGNYTLVNITGLKANTAYYLSVAAFNTAGPG 889
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P+S T + P + P + I +T+ + W V E + GY V +
Sbjct: 890 PQSAPINSTTKKPPPDRAPLNIQWNMIG-STLTLHWNPVVAMETESKVTGYLVLL----- 943
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT--FQMGEEKE 596
R ND + + N A++ LS Y +++ A S GG+G S P MG
Sbjct: 944 KRHRYNDILTVLTNRTTAEL-SLSANDNYLIQIKAVSEGGEGVGSEPIHIHKLSMGARGS 1002
Query: 597 FKSG-SPALYSASTTLLLVMSSTLYIF 622
S SP +SA +L+V L IF
Sbjct: 1003 GASHLSPLCHSA---VLIVALLHLVIF 1026
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
GN+ C PKP + W K+G + + GR +I ENG L IS ++R DSG+Y C A N
Sbjct: 337 GNLFWECKANGKPKPSYSWLKNGEQVMADGRVQI-ENGALSISSLNRSDSGMYQCVAENK 395
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
HG+ S +L+VL P + + P + + A ++ + +W + G
Sbjct: 396 HGIIYSSAQLMVLASPPTFSKSPLRALLKARSGSEVTLECKPQASPPAISLW-----KKG 450
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
N L E + D G L+I N + DA Y C+ K+ G ST +IV P
Sbjct: 451 NEILQRTERIALLPD-GTLKIANVTKRDAASYTCIAKNQFGTASTTGRLIVTEP 503
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + V + C P P+ W++ + + N L I ++D+G Y C
Sbjct: 243 AAKESAVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQEDAGTYECM 302
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GR I H ++ Q ++ NL C A+ + +Y W NG
Sbjct: 303 AENRRGKNAARGR-ISFHAKPHWLQTMADTALSIEGNLFWECKANGKP--KPSYSWLKNG 359
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180
++ + + I+ G L I++ + +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 360 EQV-------MADGRVQIENGALSISSLNRSDSGMYQCVAENKHGIIYSSAQLMVLASPP 412
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATNVH 66
TI C E +P P++ W +G +I G R+ G+L+IS + +D D+G+Y CTA N+
Sbjct: 50 TITCEAEGSPPPQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNMW 109
Query: 67 G-MDESKGRLIVLHGPSYYEQ-LPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G + + L + ++ Q + + + + + L C H+ EL + W N
Sbjct: 110 GSILSRRASLQFAYLDNFKTQSVRSAVNVREGQGVVLLCGPPPHSGEL---TFAWIFNEY 166
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG--KISTKTTVIVEGP 179
D I+ + G L I +D G Y CVV +TV KI + T +V
Sbjct: 167 PHFVQQDSRRF----ISQETGSLYIAKVERSDVGNYTCVVNNTVTREKILSSPTPLVLRS 222
Query: 180 PGLPGGVQ-VVEVH 192
G+ G + +EVH
Sbjct: 223 DGVMGEYEPKIEVH 236
>gi|301760363|ref|XP_002915992.1| PREDICTED: contactin-4-like [Ailuropoda melanoleuca]
Length = 1110
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 298/622 (47%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 507 GGEVVIECKPKASPKPVYTWKKGRDILRENERITISEDGSLKIVNVTKSDAGSYTCIATN 566
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 567 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 625
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E + G L+ I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 626 DFDKDGDHFERVGGDSAGDLM-IRNIQLKHAGKYICMVQTSVDKLSAGADLIVRGPPGPP 684
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 685 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 739
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 740 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 799
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 800 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 858
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 859 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 914
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN AG GP S
Sbjct: 915 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNTAGTGPSSA 974
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 975 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNKQSSTS 1033
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 1034 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1084
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1085 GPSTSNACTLSAISTIMISLTA 1106
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 323 AKGTTVRLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 381
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 382 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 438
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 439 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 491
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G Y C
Sbjct: 127 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDIGVDFRYSVVEGSLLINNPNKTQDAGTYQCI 186
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C AH+ EL +Y W
Sbjct: 187 ATNSFGTVVSREAKLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPAHSGEL---SYAWI 243
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 244 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 285
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 286 TNHKVLGPP 294
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 24/224 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 221 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 280
Query: 62 ATNVHGMDESKG--RLIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELL 111
TN + G ++L + PKI + A ++L C A +
Sbjct: 281 VTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVHFPEMVPTAKGTTVRLECFALGNPVP 340
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ IW +G I + G+LEI N DAG YECV +++ GK
Sbjct: 341 TI--IWRRADGKPIA-------RKARRHKSNGILEIPNFQQEDAGLYECVAENSRGKNVA 391
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P + + V + W + NGRP Y+
Sbjct: 392 RGQLTFYAQPNWIQKINDIHV-AIEENVFW-ECKANGRPKPTYR 433
>gi|426249258|ref|XP_004018367.1| PREDICTED: contactin-4 [Ovis aries]
Length = 1026
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + L++ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N P+T Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPVTMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWSRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GPSTSNACTLSAISTIMISLTA 1022
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 39/192 (20%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCI 101
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 115
ATN+ G S+ + +Y E P+ +++ + + L C AH+ EL +Y
Sbjct: 102 ATNLFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQGMVLLCGPPAHSGEL---SY 155
Query: 116 IWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 156 AWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV--- 200
Query: 169 STKTTVIVEGPP 180
T V GPP
Sbjct: 201 ---TNQKVLGPP 209
>gi|317418928|emb|CBN80966.1| Contactin-3 [Dicentrarchus labrax]
Length = 1026
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 287/589 (48%), Gaps = 28/589 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A+P +WKK I+ R + NG L I+ V+R D+ Y+C
Sbjct: 425 ARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLPNGTLKITNVTRRDAASYTCV 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + GRLI+ P+ P + I ++ L C + LDV++ W NG
Sbjct: 485 AKNQFGTASTTGRLIITE-PTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWAFNG 543
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D + E +I G L+ I N G+Y CV+ + V +ST ++V+GPP
Sbjct: 544 QLIDFQRDSDHFERVGGSISGDLM-IRNIQLNHGGKYVCVIDTDVESLSTSAILVVKGPP 602
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V V E+ ++A + WT G NG PIT Y I ART + W + +
Sbjct: 603 GPPDKVAVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVV 657
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + L W YEF+V+A N +G GEPS S + T P AP+ +GGGGG
Sbjct: 658 NGNMLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDAIPDTAPTDVGGGGGT 717
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WEP+P E QN Y I +R + + G V V R + ++
Sbjct: 718 KSELVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTPG-VARYVFRNDTIPPFS 776
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV A N+ G GP S + T++SAE++P VAP+ V +R ++ I V W + I E
Sbjct: 777 PFDVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQIEVIWEALPAIPE- 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEG 478
R++G+ YW++D +T R + N+ L I GL+ +T YY+ V A+N AG G
Sbjct: 836 ---RVLGYEAVYWEDDTKPDTVGKV--RISGNYTLVNITGLKANTVYYLSVAAFNTAGPG 890
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P+S T + P + P + I +T+ + W V E + GY V +
Sbjct: 891 PQSAPINTTTKKPPPDRAPLNIQWTMIG-STLTLHWDPVVAMETESKVTGYLVLL----- 944
Query: 539 DMSRAND--TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
R ND TI+ T++ + LS Y +++ A S GG+G S P
Sbjct: 945 KRHRYNDINTILTNKTTVE---LSLSANDNYLIQIKAMSEGGEGAGSEP 990
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 147/600 (24%), Positives = 234/600 (39%), Gaps = 73/600 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + GR +I ENG L I+ ++ DSG+Y C A N HG+ S
Sbjct: 343 CKATGKPKPSYSWLKNGDQVVAEGRVQI-ENGALSIAALNLSDSGMYQCVAENKHGIIYS 401
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
+L+VL P + + P + + A ++ + +W + GN L
Sbjct: 402 SAQLMVLASPPSFSKSPLRALLKARSGSEVTLECKPQASPPAISLW-----KKGNEILQR 456
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVK------STVGKI-----------STKTTV 174
E + + G L+ITN + DA Y CV K ST G++ T +
Sbjct: 457 TERITL-LPNGTLKITNVTRRDAASYTCVAKNQFGTASTTGRLIITEPTRITMRPTNMEI 515
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
IV LP Q+ + W A NG+ I + ++ ++S ++
Sbjct: 516 IVGESIVLP--CQIACDPALDVSFSW---AFNGQLIDFQR--DSDHFERVGGSISGDLMI 568
Query: 235 KEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ + + G+ I+ + ST V+ G P P +
Sbjct: 569 RNIQLNHGGKYVCVIDTDVESLSTSAILVVKG---------------------PPGPPDK 607
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVR 352
+ +SW P +P Y I R +Q+ +T+ E N +
Sbjct: 608 VAVEEITDSTAQLSWTP--GRDNGSPITGYIIQARTPFTVGWQAVDTVPEVVNGNMLTAT 665
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED-MPQVAPQGVFSRGFNSTAINVTW 411
+ + EYE +V A N VG G S T ED +P AP V G + + +TW
Sbjct: 666 VVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDAIPDTAPTDVGGGGGTKSELVITW 725
Query: 412 NPI--ELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
P+ EL G +I R + + + Y+ R + P + +
Sbjct: 726 EPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTPGVARYVFRNDT-------IPPFSPF 778
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
VKV AYNN GEGP S + + P P V + ++ + V W + P+ E
Sbjct: 779 DVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQIEVIWEAL-PAIPER- 836
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
++GY+ WE D I GN +I L Y++ V AF+ G G S+P
Sbjct: 837 VLGYEAVYWEDDTKPDTVGKVRIS-GNYTLVNITGLKANTVYYLSVAAFNTAGPGPQSAP 895
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V + C P P+ W++ I + N L I + ++D+G Y C A N G
Sbjct: 249 VKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNLQQEDAGTYECMAENRRG 308
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+ ++GR I H ++ Q ++ NL C A + +Y W NG ++
Sbjct: 309 KNAARGR-ISFHAKPHWLQTMTDTALSIEENLFWECKATGKP--KPSYSWLKNGDQV--- 362
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGL 182
+ + I+ G L I + +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 363 ----VAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSF 414
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATNVH 66
TI C E + ++ W +G +I G R+ G+L+IS + +D D+G+Y CTA N
Sbjct: 50 TITCEAEGSSPLQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGVYQCTAFNTW 109
Query: 67 GMDESK-GRLIVLHGPSYYEQ-LPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ Q + + + + + L C AH+ EL + W N
Sbjct: 110 GAILSRRASLQFAYLDNFKSQTVRSAVNVREGQGVVLLCGPPAHSGEL---TFAWIFNEY 166
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG--KISTKTTVIVEGP 179
D I+ + G L I +D G Y CVV +TV K+ + T +V
Sbjct: 167 PYFVQQDSRRF----ISQETGSLYIAKVESSDVGNYTCVVNNTVTREKVLSSPTPLVLRS 222
Query: 180 PGLPGGVQ-VVEVH 192
G+ G + +EVH
Sbjct: 223 DGVMGEYEPKIEVH 236
>gi|395516497|ref|XP_003762424.1| PREDICTED: contactin-3 [Sarcophilus harrisii]
Length = 1049
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 302/623 (48%), Gaps = 25/623 (4%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G++ IF C P+A+PK WKK ++ S R I ++G L I+ V++ D G Y+C A N
Sbjct: 444 GSLVIFDCKPKASPKAHCSWKKGDEVLQSSERITILKDGELQIANVTKLDVGTYTCLAEN 503
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VR 123
G S LIV P+ P + ++ ++ L C + LLD+ + W NG +
Sbjct: 504 QFGKASSSTNLIVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIVFTWYFNGAIT 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 563 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTEVDSVSSAAELIVRGSPGPP 621
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+T Y I ART ++ W ++ D G+
Sbjct: 622 ESVKVDEITDTTAQLSWKEGTDNHSPVTSYVIQARTPFSVGW-----QIVTTVPDVIDGK 676
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 677 TFTATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 736
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 737 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESILSFSPYE 795
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+W+ I + G
Sbjct: 796 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVLANSLSSSIIEVSWDAIPWKMSS--G 853
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ I+YW E+++ A + GLQ + YY V AYN+AG GP S
Sbjct: 854 RLLGYEIRYWNNGGKEDSSNRVKVMGNETSARLQGLQSNLVYYTAVRAYNSAGTGPFSAT 913
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP+ + + + V + W V E + GYKV + S+
Sbjct: 914 VNATTKKMPPSQPPANI-VWNATESKVLINWEQVKAMDNESEVTGYKV----FYRTSSQN 968
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQ--MGEEKEF 597
N I+ T ++ ++ + Y + V A ++GGDG S P IT G
Sbjct: 969 NMNILNTNKTWAELLLPIN--EDYIIEVKASTDGGDGTSSEQIRIPRITNMDARGSSSTV 1026
Query: 598 KSGSPALYSASTTLLLVMSSTLY 620
++ P L S + L + + L+
Sbjct: 1027 RNVYPFLSSCISILPIFLVKILW 1049
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 136/630 (21%), Positives = 233/630 (36%), Gaps = 104/630 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + S + NG L I ++DSG+Y C
Sbjct: 259 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKMKKSNGMLEIPNFQQEDSGLYECI 318
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL P ++ Q+ + A NL C A + +Y W NG
Sbjct: 319 AENSRGKNVARGRLTYYAKP-HWVQMIKDVEAAVEDNLYWECRASGKP--KPSYRWLKNG 375
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + E + ++ G L I+ + D+G Y+C+ ++ G I S + V+ P
Sbjct: 376 ---DGLVIEE----RVQLENGALSISFLNVNDSGMYQCIAENKHGLIYSSAELKVVASAP 428
Query: 180 PGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ ++++V S I D P H +W E + E
Sbjct: 429 DFSKNPMKKLIQVQIGSLVI--FDCKPKASPKAH----------CSWKKGDEVLQSSERI 476
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
E I NV + +A N+ +G+ SS + T + APS +
Sbjct: 477 TILKDGELQIANV-TKLDVGTYTCLAENQ--FGKASSSTNLIVTEPTRITLAPSNMDVS- 532
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIAV 350
+G+ I LP + Q+ P + W KK+ + F+ G++ I
Sbjct: 533 --VGESVI----LPCQVQHDPLLDIVFTWYFNGAITDFKKDGSHFEKVGGSSSGDLMIRN 586
Query: 351 VRIP-SEFYYTEYEVKVQAINDVG-------PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
+++ S Y + +V +++ PGP V +++ Q + G
Sbjct: 587 IQLKHSGKYVCMVQTEVDSVSSAAELIVRGSPGPPESV----KVDEITDTTAQLSWKEGT 642
Query: 403 NS------------TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
++ T +V W + + + I G+
Sbjct: 643 DNHSPVTSYVIQARTPFSVGWQIVTTVPDVIDGKTFT----------------------- 679
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
A +V L P +Y +V+A N G G P RT P+ PPS V G + +
Sbjct: 680 ---ATVVDLNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 736
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVD-----QDMSRANDTIIPVGNTLDADIVDLSPG 564
+ +TW V + GY V + Q + + DT P + I+ SP
Sbjct: 737 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDT--PRYVFRNESILSFSP- 793
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
Y ++V ++N G+G S F EE
Sbjct: 794 --YEVKVGVYNNKGEGPFSPVTTVFSAEEE 821
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLL-ISPVSRDDSGIYSCT 61
E VT+ C + P P + W+ +G+ I S R GNL+ I+P D+GIY C
Sbjct: 62 EEKKVTLNCEAKGNPSPHYRWQLNGSDIDLSMEYRYKLNGGNLVVINPNRNRDTGIYQCF 121
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
A+N G SK +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 122 ASNSLGTVVSKEAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 178
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 179 FNEYP---SFVQEDRRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 222
>gi|410908411|ref|XP_003967684.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
Length = 1002
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 292/595 (49%), Gaps = 33/595 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C P+AAPKP F W KD ++ + R I+E+G+L I V+R D G Y+C
Sbjct: 410 APRNGRVVIECRPKAAPKPTFTWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCF 469
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L+VL + P I A N ++C+A + LD+ +IW+ +
Sbjct: 470 AENDRGKANSTGSLLVLES-TKINLAPTNADIKAGENALMQCAALHDPSLDITFIWSLDD 528
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D E G L I NA AG Y C+ ++ + + ++V GPP
Sbjct: 529 HVIDVQTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCMAQTPIDNATESAQLVVRGPP 588
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDR 239
G PGGV+V+ + T+QW+ GA N PI+ Y I R ++ W + EV+
Sbjct: 589 GAPGGVRVMNKTEKKVTLQWSRGADNHSPISKYSIQYRDAYSGDEWKKAA--TSPPEVE- 645
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L PW+ YEF+V A N LG GEPSSP+ + T P APS IGGGGG
Sbjct: 646 --GNAETATVVDLFPWTEYEFRVFAANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGGGG 703
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRIP 354
+L+I+W P+ + N Y + +R ++ E++ + + Y + +A+ +
Sbjct: 704 TSRELTITWTPVQPQHYYGSNFGYIVAFRPFDNKEWRKVMVADPLARSYIHKDLALPPL- 762
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T+++VKV+A N G GP S I+SA+D P AP G + ++T V+W P+
Sbjct: 763 -----TKFQVKVKAFNSKGEGPFSLTAVIYSAQDAPSEAPSGFEGKALSATEAFVSWLPL 817
Query: 415 ELIRENIRGRLIGHRIKYWK-EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + G+++K+W+ + E A + T + G++P++ Y ++V YN
Sbjct: 818 P------QDSIDGYQVKFWRNHEESEGGAQTVTASNTDTNTRLDGMKPNSNYLIEVRGYN 871
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
AG GP SER RT + P + P + K + T+++ W P +E I GYKV
Sbjct: 872 TAGYGPPSERLQIRTKKAPPSQAPRIIG-KRLKGQTINIAWENAQPLPDEAAIDGYKVLY 930
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ Q + T + L D+ + G Y + V A + GGDG ++ IT
Sbjct: 931 RKQGQALGTLYTT-----SRLYIDLPLPAEGD-YVVEVRAHTEGGDGAVAQIQIT 979
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 147/625 (23%), Positives = 248/625 (39%), Gaps = 82/625 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T+ C P+P+ W K+G ++ + + + ++ +DSG+Y C A N
Sbjct: 330 GSRYTMSCVASGKPEPQIRWMKNGELL---------DRDEMSFNSLTFEDSGMYQCVAEN 380
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG+ + L V +E P K +A RN ++ + + W+ + +
Sbjct: 381 RHGVLYANAELRVFACAPTFEHNPLKRVLAP-RNGRVVIECRPKAAPKPTFTWSKDTELL 439
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEG----- 178
N T + G LEI N + AD G Y C ++ GK ST + +++E
Sbjct: 440 SN------STRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKINL 493
Query: 179 -------PPGLPGGVQVVEVHKTSATIQ--WT------DGATNGRPITHYKIIARTNWNS 223
G +Q +H S I W+ D T+ + HY+ TN +S
Sbjct: 494 APTNADIKAGENALMQCAALHDPSLDITFIWSLDDHVIDVQTDSQ---HYE--RGTNGSS 548
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS--PQYN 281
+ ++ K RYT + I+N +T +++ G P +P N
Sbjct: 549 NGALLIKNAQLKHAGRYTCMAQTPIDN-----ATESAQLVV-----RGPPGAPGGVRVMN 598
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 341
K SR I SI + + Y W+K + + E
Sbjct: 599 KTEKKVTLQWSRGADNHSPISKYSIQYR----------DAYSGDEWKKAATSPPEVE--- 645
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN A V F +TEYE +V A N +G G P S + + +P VAP +
Sbjct: 646 --GNAETATVV--DLFPWTEYEFRVFAANTLGTGEPSSPTAKEKTLDAVPVVAPSNIGGG 701
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGL 459
G S + +TW P++ ++ G G+ + + DN E V R++ + L
Sbjct: 702 GGTSRELTITWTPVQ--PQHYYGSNFGYIVAFRPFDNKEWRKVMVADPLARSYIHKDLAL 759
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P TK+ VKV A+N+ GEGP S + + + AP + PS K ++ T V+W
Sbjct: 760 PPLTKFQVKVKAFNSKGEGPFSLTAVIYSAQDAPSEAPSGFEGKALSATEAFVSWL---- 815
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ I GY+V+ W ++ T+ + + + P Y + V ++ G
Sbjct: 816 PLPQDSIDGYQVKFWRNHEESEGGAQTVTASNTDTNTRLDGMKPNSNYLIEVRGYNTAGY 875
Query: 580 GRMSSPAITFQMGEEKEFKSGSPAL 604
G P+ Q+ +K S +P +
Sbjct: 876 G---PPSERLQIRTKKAPPSQAPRI 897
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 23/166 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G N+T+ C P P+ +WKK DG + + R +L + V +DSG Y C A
Sbjct: 241 GQNITLECFALGNPVPEIMWKKLDGELPPNHEVRTA--GAHLHLHNVQFEDSGTYQCEAV 298
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G D L V P + E + + + + + S E + W NG
Sbjct: 299 NSKGKDYHTALLSVEAFPEWVEHITNTEKDLGSRYTMSCVASGKPEPQIR----WMKNG- 353
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
EL +D + + +F D+G Y+CV ++ G +
Sbjct: 354 --------EL------LDRDEMSFNSLTFEDSGMYQCVAENRHGVL 385
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLIS-PVSRDDSGIYSCTA 62
+T+ C A+P + W+KD I F GNL+IS PV +G Y C A
Sbjct: 42 AKITMNCRARASPPATYKWRKDNKDIDFSAESSHFSLMGGNLVISDPVKEQHAGNYCCLA 101
Query: 63 TNVHG 67
N G
Sbjct: 102 ANTFG 106
>gi|359078219|ref|XP_002697014.2| PREDICTED: contactin-4 [Bos taurus]
Length = 1026
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 296/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + L++ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPASA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWSRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GPSTSNACTLSAISTIMISLTA 1022
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCI 101
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 115
ATN G S+ + +Y E P+ +++ + + L C AH+ EL +Y
Sbjct: 102 ATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQGMVLLCGPPAHSGEL---SY 155
Query: 116 IWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 156 AWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV--- 200
Query: 169 STKTTVIVEGPP 180
T V GPP
Sbjct: 201 ---TNQKVLGPP 209
>gi|449474236|ref|XP_002186936.2| PREDICTED: contactin-4 [Taeniopygia guttata]
Length = 1028
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 301/621 (48%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + WKK +I+ R + ++G+L I V++ D+G Y+C ATN
Sbjct: 424 GGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIINVTKSDAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 484 HFGTASSTGSLVV-KDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGHLI 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I + AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 543 DFEKDGDHFERVGGDSAGDLM-IRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + EV +++A + W GA N PIT Y + ART ++ W VS + + +D GR
Sbjct: 602 EAVTIEEVTESTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVS--TVPEVID---GR 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N +G GEPSSPS + T P P+ + GGGG +
Sbjct: 657 TFTATVVGLNPWVEYEFRVVAANLIGIGEPSSPSEKRRTEEALPEVTPANVSGGGGSKSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + +T+ + V R S ++ YE
Sbjct: 717 LVITWETVPEELQNGGGFGYVVAFRPLGTVSWM-QTVVASPDAARYVFRNESLPPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G G S V ++SAE+ P AP V +R +++ + V+W P +G
Sbjct: 776 VKVGVYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSISASDVEVSWAPP--WENQHKG 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ ++ W+ D EE A + + + L+ + Y++ V AYN AG GP S
Sbjct: 834 RIQGYEVRCWRHDEKEENAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAA 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + + + + + + W V E + GYKV W + S
Sbjct: 894 VNVTTKKPPPSQPPGNI-VWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRESSTSV 952
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 953 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSG 1003
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ S SA +T+++ +++
Sbjct: 1004 SSTSSACTLSALSTIMISLTA 1024
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ DG + RR +G L I ++D+G+Y C
Sbjct: 239 SAKGTTVKLECFALGNPVPTISWRRADGKQLPRKARRH-RSSGLLEIPNFQQEDAGLYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A NV G + ++G+L PS+ +Q+ + A + C A +Y W +
Sbjct: 298 VAENVRGKNVARGQLTFYAQPSWTQQI-SDVHAAIEERVSWECRASGRP--KPSYRWLKD 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + +LE G L I N S +DAG Y+CV ++ G I S + +VI G
Sbjct: 355 GEPLQPQGRLQLEQ-------GSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIG 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 19/183 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + P+P WK +G+ I G R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLSCEVKGNPRPTIGWKLNGSSIDVGMDYRYSLLEGDLLINNPNKSQDAGMYQCV 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL Y W
Sbjct: 102 ATNPFGTIVSREAQLQFAYLENFKTRTRSTVSVRQGQGMVLLCGPPPHSGEL---TYAWI 158
Query: 119 HNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
N + D ++ + G L I +D G Y CVV +TV T V
Sbjct: 159 FNEYPSFVHQDSRRF----VSQETGNLYIAKVETSDVGNYTCVVTNTV------TNSKVL 208
Query: 178 GPP 180
GPP
Sbjct: 209 GPP 211
>gi|297285374|ref|XP_001101217.2| PREDICTED: contactin-4-like isoform 2 [Macaca mulatta]
Length = 807
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 294/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 322 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
+ T RK + + + + + W V E + GYKV W S
Sbjct: 672 -TVNVTTRKPRKNRXXXXXXXNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GASTSNACTLSAISTIMISLTA 803
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 19 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 135 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 187
>gi|351695049|gb|EHA97967.1| Contactin-3 [Heterocephalus glaber]
Length = 1021
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 286/580 (49%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R ++G L I+ V++ DSG Y+CTA N
Sbjct: 417 GSLVNLDCKPRASPRALSSWKKGNTVVQEHERISFLKDGGLKIANVTKADSGTYTCTAEN 476
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + L+V+ P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 477 QFG-KANGTTLLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 535
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 536 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTRVDSVSSAAELIVRGSPGPP 594
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V++ E+ T+A + W +G N P+T Y I ART ++ W V+ + + +D G+
Sbjct: 595 ENVKIDEITDTTAQLSWKEGTDNHSPVTSYAIQARTPFSVGWQTVT--TVPEVID---GK 649
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 650 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 709
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 710 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMPFSPYE 768
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V WN I N G
Sbjct: 769 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSAHSVSSSEIEVAWNTIPWKLSN--G 826
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ A + GL+ + +YY V AYN+AG GP S
Sbjct: 827 RLLGYEVQYWNNGAEEESSSKVKVAGHETSARLRGLKSNLEYYTAVRAYNSAGAGPFSAT 886
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 887 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRSSSQNSVQV 945
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 946 LNT-----NKTSAELL-LPLKEDYIIEVKATTDGGDGSSS 979
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S L V
Sbjct: 338 PKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKV 396
Query: 78 LHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 133
+ + + P K + + + NL + A L W + GN + E E
Sbjct: 397 VASAPDFSKNPMKNLVQVQVGSLVNLDCKPRASPRALSS----W-----KKGNTVVQEHE 447
Query: 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ DGG L+I N + AD+G Y C ++ GK + T ++V P
Sbjct: 448 RISFLKDGG-LKIANVTKADSGTYTCTAENQFGKANGTTLLVVTEP 492
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 232 AAKGATVKLECFALGNPVPQINWRRSDGMPFPAKIKLRKF-NGVLEIPAFQQEDAGSYEC 290
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ Q + +A ++ A + +Y W N
Sbjct: 291 IAENSRGKNVARGRLTYYAKP-HWVQFIKDMEMAVEDSIYWEFQASGKP--KPSYRWLKN 347
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 348 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 400
Query: 179 P 179
P
Sbjct: 401 P 401
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 24 WKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTATNVHGMDESK-GRLIVLHG 80
W+ +G NI S R GNL++ +R+ D+G Y C ATN G S+ +L +
Sbjct: 55 WQLNGSNIDMSMEHRYKLNGGNLVVFNPNRNWDTGSYQCFATNSFGTVVSREAKLQFAYL 114
Query: 81 PSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 138
++ ++ +++ + + L C H+ EL +Y W N + E ++
Sbjct: 115 ENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWIFNEYP---SFVEEDSRRFVS 168
Query: 139 IDGGLLEITNASFADAGEYECVVKSTV 165
+ G L I +D G Y CVV S V
Sbjct: 169 QETGHLYIAKVEPSDVGNYTCVVMSMV 195
>gi|348543227|ref|XP_003459085.1| PREDICTED: contactin-2-like [Oreochromis niloticus]
Length = 1039
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/550 (34%), Positives = 269/550 (48%), Gaps = 35/550 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPKP W + ++ + R + +G L I +SR D G Y+C
Sbjct: 428 AARGGQVMIDCRPRAAPKPSLFWSRGTELLTNSSRITVTPDGILWIYNISRADEGKYTCF 487
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N+ L+C A + +D+ + W+ NG
Sbjct: 488 AENYLGKANSTGHLSV-RDATKITLAPSNADINQGENVTLQCHASHDAAMDLTFTWSLNG 546
Query: 122 VRIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V +DL P ++G G L I A + AG Y C ++ V S ++V
Sbjct: 547 VL---LDLENSAGPYHRVEGKENTGDLLIVRAQLSQAGIYVCTAQTVVDSASASARLVVR 603
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
GPPG PGG+ V V +TS ++W+ G N PI Y I+ R+ +S W + + E
Sbjct: 604 GPPGPPGGLLVKNVAETSVELRWSCGYDNHSPIGKYVIMGRSPLSSEWRKMRTDPVNIE- 662
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E++ L+PW+ YEF+VIA N LG GEPS PS T P APS + GG
Sbjct: 663 ----GNAESARVIGLIPWTDYEFRVIASNILGSGEPSMPSHIIRTLQAAPTVAPSGLAGG 718
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L ++W P+ RE QN Y + +RKK + + + V R+ S
Sbjct: 719 GGDRDELIVTWTPMAREYQNGDGFGYILAFRKKGTSSWTE----------VRVPRVESSR 768
Query: 358 Y---------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
Y YT +EVK++A N G GP S+V + SAE+ P V P + + ++ I
Sbjct: 769 YVYYNSSLAAYTPFEVKIKAYNHKGEGPFSQVAVVHSAEEEPTVGPSSINATALSAFEIQ 828
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
V+W P++ + N G L G+ I+YW++ E A + A + GL+P T+Y+V
Sbjct: 829 VSWEPVQQLSAN--GILRGYEIRYWRQHEREAAADRVRTAGLEPTARVSGLRPSTRYHVA 886
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+AYN+AG GP S R T + P +PP +V K + + V V W V E I+G
Sbjct: 887 VLAYNSAGTGPPSPRTTVTTRKPPPNRPPGSVSWKA-HGSRVTVRWDQVIAMHNESAILG 945
Query: 529 YKVRVWEVDQ 538
YKV DQ
Sbjct: 946 YKVLYKHEDQ 955
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G + C P PK W+K DG + G E L + +S DD GIY
Sbjct: 246 YALAGHTAQLECFAYGNPVPKVRWRKVDGLMPSKAG--PTVEGPTLTLPELSFDDEGIYE 303
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+ V P + Q+ + +LQ C A + V W
Sbjct: 304 CEAYNSEGRDTYQGRINVQAQPEWL-QVMTDSEVEISSDLQWSCVAAGKPRPSVR--WLR 360
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
NG + D + ++G L I N + D+G Y+CV ++ G I + + V+
Sbjct: 361 NGQPLSTQD-------RVEVNGVHLRIINLALEDSGMYQCVAENKHGTIYSTAELRVQ 411
>gi|296475000|tpg|DAA17115.1| TPA: contactin-4-like [Bos taurus]
Length = 1014
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 298/622 (47%), Gaps = 31/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 411 GGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATN 470
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + L++ + W+ NG R+
Sbjct: 471 HFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNG-RL 528
Query: 125 GNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + + D G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 529 IDFDRDGDHFERVGGDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPP 588
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 589 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 643
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 644 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 703
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 704 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 762
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 763 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 818
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 819 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPASA 878
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 879 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWSRQSSTS 937
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 938 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 988
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 989 GPSTSNACTLSAISTIMISLTA 1010
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 227 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 285
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 286 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 342
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 343 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 395
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G+Y C
Sbjct: 31 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCI 90
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 115
ATN G S+ + +Y E P+ +++ + + L C AH+ EL +Y
Sbjct: 91 ATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQGMVLLCGPPAHSGEL---SY 144
Query: 116 IWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 145 AWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV--- 189
Query: 169 STKTTVIVEGPP 180
T V GPP
Sbjct: 190 ---TNQKVLGPP 198
>gi|350591368|ref|XP_001927514.4| PREDICTED: contactin-4 [Sus scrofa]
Length = 807
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 192/622 (30%), Positives = 296/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 203 GGEVVIECKPKASPKPVYTWKKGRDVLRENERITISEDGSLRIINVTKSDAGSYTCIATN 262
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + L + + W+ NG I
Sbjct: 263 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLAIVFTWSFNGHLI 321
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 322 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 381
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 382 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPEIID---GK 436
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 437 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 496
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 497 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 555
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 556 VKVGVYNNKGEGPFSPTTVVYSAEEEPSKPPASIFARSLSATDIEVFWASPM----EKNR 611
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 612 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSALYHLAVKAYNSAGTGPSSA 671
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 672 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 730
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 731 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 781
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 782 GPSTSNACALSAISTIMISLTA 803
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG + RR NG L I ++D+G+Y C
Sbjct: 19 AKGTTVKLECFALGNPVPTIIWRRADGKPMARKARRH-KSNGILEIPNFQQEDAGLYECV 77
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 78 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAIEENIFWECKANGRP--KPTYRWLKNG 134
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 135 DPLLSRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 187
>gi|326928156|ref|XP_003210247.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Meleagris
gallopavo]
Length = 1057
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 276/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG VTI C P A+P+ W+K ++ R + E+G+L + +++ D+G+Y+C ATN
Sbjct: 453 GGEVTIACRPSASPRAAIDWRKGPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCIATN 512
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + G LIV + P + + ++ L C + + V + W+ NG +I
Sbjct: 513 QFGVARNSGNLIVKER-TVITIPPSNMDVTVGESIVLPCQVSHDPSIAVVFTWSFNGNKI 571
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+++ E G L+ I N G+Y C+V++T+ ST VIV GPPG P
Sbjct: 572 DFKREMHHFERIGGESVGDLM-IRNIQLHHTGKYVCMVQTTLDSQSTAVDVIVRGPPGPP 630
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V + T+A + W G N P+ Y I RT ++ W + + +GR
Sbjct: 631 ENVRVEHISSTTAVLSWKSGIDNNSPVQIYSIQTRTPFSVGW-----QAVSTVPEVLSGR 685
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N +G GEPS PS T A P AP+ + GGGG +
Sbjct: 686 THKATLVDLSPWVEYEFRVVASNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSRSE 745
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+P E QN Y + +R T + + V R S + +E
Sbjct: 746 LVITWEPVPEELQNGEGFGYIVMFRPLGSTTWTKAAVAPV-EASKYVYRNESITPLSPFE 804
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G G S V ++S ED PQ+AP G + ++ + V+W P+ R G
Sbjct: 805 VKVGVYNNEGEGTLSSVSIVYSGEDEPQIAPAGTSALSISAAEVEVSWQPVAWNRHT--G 862
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R++G+ + YW +D E TA I GL+ +T Y+ V AYN AG GP S
Sbjct: 863 RVLGYEVLYWTDDPKESTAGKVRVNGNITAQNITGLKANTVYFATVRAYNTAGMGPSSAP 922
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP+ + K N + + + W +V E ++GYK+ + + +
Sbjct: 923 VNVTTKKSPPSQPPANIAWKLTN-SKICLNWEHVKTMENESEVLGYKI----LYRQNRHS 977
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
I+ NT +V + Y + + S+GGDG S
Sbjct: 978 KAHILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 1015
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 17/235 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N VG G P + + +P VAP V G + + + +TW P+
Sbjct: 697 WVEYEFRVVASNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSRSELVITWEPVPEE 756
Query: 418 RENIRG-------RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+N G R +G P E + Y RN ++ P + + VKV
Sbjct: 757 LQNGEGFGYIVMFRPLGSTTWTKAAVAPVEASKYVY----RNESIT----PLSPFEVKVG 808
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEG S + + PQ P+ I+ V V+W+ V+ + ++GY+
Sbjct: 809 VYNNEGEGTLSSVSIVYSGEDEPQIAPAGTSALSISAAEVEVSWQPVAWNRHTGRVLGYE 868
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
V W D S A + GN +I L Y V A++ G G S+P
Sbjct: 869 VLYWTDDPKESTAGKVRVN-GNITAQNITGLKANTVYFATVRAYNTAGMGPSSAP 922
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 22/188 (11%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISP-----VSRD 53
YA +G +V + C P P W++ GS +KI + N +L P V ++
Sbjct: 263 YAAKGSSVKLECFALGNPVPNISWRRSD---GSSLTKKIERDKNKGVLEIPDVQQXVQQE 319
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G + ++G+L V P + +++ ++ + +L C A +
Sbjct: 320 DEGSYECIAENIRGRNIARGQLFVYALPEWDKKIENAF-LSLYDSLFWECKAKXKP--TP 376
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STK 171
+Y W NG + + I ++ G L I + +D+G Y+CV ++ I S +
Sbjct: 377 SYSWLKNGQPL-------MSEERIQVENGTLIIPMVNMSDSGLYQCVAENKYDTIYASAE 429
Query: 172 TTVIVEGP 179
VI P
Sbjct: 430 LRVIAAAP 437
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C + P P + W K+G + S R ++ ENG L+I V+ DSG+Y C A N + +
Sbjct: 368 CKAKXKPTPSYSWLKNGQPLMSEERIQV-ENGTLIIPMVNMSDSGLYQCVAENKYDTIYA 426
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + R SA +D W G + +
Sbjct: 427 SAELRVIAAAPDFSKNPVKKTSVVQVGGEVTIACRPSASPRAAID----W-RKGPEVLRL 481
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ L ++ G L + N + +DAG Y C+ + G +IV+
Sbjct: 482 NKRALL-----LEDGSLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVK 526
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C + P P + WK++G I + G+L I+ P + D G Y C ATN
Sbjct: 71 VLLNCTAKGYPLPNYRWKQNGTDIDLTMSYHYRLVGGSLAINNPRKKQDIGTYQCLATNS 130
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + ++ + +++ + + L C +++ WT N
Sbjct: 131 FGTILSRKAKLQFAYLENFEMKTRSTVSVREGQGVVLLCGPPPHH-GGLSFAWTFNK--- 186
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I D G Y CVV ++K V+GPP
Sbjct: 187 NTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVVT------NSKAGQSVQGPP 236
>gi|126336359|ref|XP_001373886.1| PREDICTED: contactin-6 [Monodelphis domestica]
Length = 1033
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 280/582 (48%), Gaps = 22/582 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GGNVTI C P A+P+ WKK II R I ++G+L I VS+ D+G Y+C A N
Sbjct: 429 GGNVTIECKPMASPRAMVSWKKGTEIIRQSKRFFILDDGSLNIYNVSKLDAGTYTCIAKN 488
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L++ + PP++ + ++ L C + ++V + W+ NG I
Sbjct: 489 QFGIAKASGNLVIKER-TIITVPPPQMDVTVGESIVLPCQVFHDPSVEVVFTWSFNGQVI 547
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D I G G L I +G+Y C+V++ + +S +IV GPPG
Sbjct: 548 ---DFQRGVAHFERIGGESVGDLMIREIQLNHSGKYVCMVQTILDSLSAVADIIVRGPPG 604
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P +++ + T++ + W G N PI Y I RT ++ W VS + +
Sbjct: 605 PPNNLRIENISSTTSQLCWGPGVDNNSPIQIYTIQTRTPFSVGWLAVSTIP-----EILS 659
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ I GGGG
Sbjct: 660 GKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGGSR 719
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R + ++ V R S +
Sbjct: 720 SELVITWESIPEELQNGEGFGYIIMFRPVGSLMWTKASVASV-ETSKYVYRNESLTPLSP 778
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S +++ ED PQ+AP G + ++S+ +++TWN I R
Sbjct: 779 FEVKVGVYNNEGEGTLSPATVVYTGEDEPQLAPTGASVQSYSSSEVDITWNAIAWNRST- 837
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
GR++G+ + YW ED+ E +A R +I GL+ +T Y+ V AYN AG GP S
Sbjct: 838 -GRVLGYEVLYWTEDSKETSAGKIRVRGNVTTKIITGLKANTIYFATVRAYNTAGSGPSS 896
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + PS + K N + + + W +V E ++GYK+ + Q +
Sbjct: 897 APVNITTKKSPPSQAPSNIAWKLTN-SKLCLNWEHVKTMENESDVLGYKILYRQDRQSKT 955
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
I+ NT +V + Y + + S+GGDG S
Sbjct: 956 H----ILETNNTSAELLVPFE--EDYIIEIRTVSDGGDGSSS 991
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 137/600 (22%), Positives = 228/600 (38%), Gaps = 71/600 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C +P P + W K+G I R I ENG+L+I+ ++ DSG Y C A N + +
Sbjct: 344 CRASGSPIPSYTWLKNGEPIVPEDRIHI-ENGSLMITVLNLSDSGFYQCVAENKYQTIYT 402
Query: 72 KGRLIV-LHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V P + + KI+I N+ + C V++ + G +
Sbjct: 403 NAELRVRASAPDFSKNPLQKISIVQVGGNVTIECKPMASPRAMVSW-------KKGTEII 455
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-------KISTKTTVIVEGPPGL 182
+ + I +D G L I N S DAG Y C+ K+ G + + T+I PP +
Sbjct: 456 RQSKRFFI-LDDGSLNIYNVSKLDAGTYTCIAKNQFGIAKASGNLVIKERTIITVPPPQM 514
Query: 183 PGGV--------QVVEVHKTSATIQWTDGATNG------RPITHYKIIARTNWNSTWFNV 228
V QV W+ NG R + H++ I + V
Sbjct: 515 DVTVGESIVLPCQVFHDPSVEVVFTWS---FNGQVIDFQRGVAHFERIGGES-------V 564
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ +I + ++G+ ++ +L S ++ G P P N +
Sbjct: 565 GDLMIREIQLNHSGKYVCMVQTILDSLSAVADIIVRG---------PPGPPNNLRIENIS 615
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 347
S++ G P N+P Y I R + + T+ E +
Sbjct: 616 STTSQLCWG--------------PGVDNNSPIQIYTIQTRTPFSVGWLAVSTIPEILSGK 661
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED-MPQVAPQGVFSRGFNSTA 406
+ + + EYE +V A N +G G S+ + + +P VAP + G + +
Sbjct: 662 MHTATVVGLNPWVEYEFRVVAGNSIGIGEPSKPSKLLRTKAAVPIVAPTNISGGGGSRSE 721
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGLQPDTKY 465
+ +TW I +N G G+ I + + T S T + L P + +
Sbjct: 722 LVITWESIPEELQN--GEGFGYIIMFRPVGSLMWTKASVASVETSKYVYRNESLTPLSPF 779
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
VKV YNN GEG S + T PQ P+ ++ + + V +TW ++ +
Sbjct: 780 EVKVGVYNNEGEGTLSPATVVYTGEDEPQLAPTGASVQSYSSSEVDITWNAIAWNRSTGR 839
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
++GY+V W D + A + GN I L Y V A++ G G S+P
Sbjct: 840 VLGYEVLYWTEDSKETSAGKIRVR-GNVTTKIITGLKANTIYFATVRAYNTAGSGPSSAP 898
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCT 61
E + + C P P + WK++G +I + G+L+IS P + GIY C
Sbjct: 47 EDSEIILNCAANGYPVPDYRWKQNGTDIDFTMSYHHRLVGGSLIISNPHIAEAIGIYQCL 106
Query: 62 ATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
ATN G S K +L + ++ + +++ A + + L C DV Y WT+N
Sbjct: 107 ATNPLGTIVSRKAKLQFAYIENFETKTRSTVSVLAGQGVVLFCGPPPYS-GDVFYAWTYN 165
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ E I+ G L I +D G Y C+V + + V+GPP
Sbjct: 166 D---NPFPVQEASRRFISQATGNLYIAKVEPSDVGNYTCIVTNMEAQKR------VQGPP 216
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKF-VWKKDGNI--IGSGGRRKIFE-NGNLLISPVSRDDSGI 57
AG+G V +FC P F W + N + RR I + GNL I+ V D G
Sbjct: 141 AGQG--VVLFCGPPPYSGDVFYAWTYNDNPFPVQEASRRFISQATGNLYIAKVEPSDVGN 198
Query: 58 YSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHT 107
Y+C TN+ +G +VL + PKI + A ++L C A
Sbjct: 199 YTCIVTNMEAQKRVQGPPTPLVLRSDGVMGEYEPKIEVRFPEIMHAAKGSTIKLECFALG 258
Query: 108 EELLDVAYIWTHNGVRIGNMDLNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ D+++ +D + L + G++ I N D G YEC+ + G
Sbjct: 259 NPVPDISW---------RKLDGSPLARKIQYSKSKGMIAIPNFQEEDEGSYECIAGNLRG 309
Query: 167 K 167
+
Sbjct: 310 R 310
>gi|395824772|ref|XP_003785629.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Otolemur garnettii]
Length = 1470
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 284/582 (48%), Gaps = 22/582 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK I+ R ++G L I+ V++ D+G Y+CTA N
Sbjct: 866 GSLVSLDCKPRASPRAQSFWKKGEVIVQEQERISFLKDGGLKIANVTKADAGTYTCTAEN 925
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 926 QFGKANGTTHLVVTE-PTKITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGAL- 983
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + + + G G L I N +G+Y C+V++ V +S+ +IV G PG
Sbjct: 984 --ADFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 1041
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D
Sbjct: 1042 PPENVKVDEITDTTAQLSWKEGTDNHSPVLSYSIQARTPFSVGWQTVT--TVPEVID--- 1096
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+A N++G GEPS PS + T P PS + GGGG
Sbjct: 1097 GKTHTATVVELNPWVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSR 1156
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+W+P+P E QN + Y + +R T + +T+ + V R S ++
Sbjct: 1157 SELVITWDPVPEELQNGEGLGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIMPFSP 1215
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
YEVKV N+ G GP S V T+FSAE+ P VAP VF+ +S+ I V+WN I N
Sbjct: 1216 YEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVFANSLSSSEIEVSWNTIPWKLSN- 1274
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
G L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 1275 -GHLLGYEVRYWNSGGREESSSKVRVAGNETSARLRGLKSNLAYYTAVRAYNSAGPGPFS 1333
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P +PP V + T V + W V E + GYKV Q
Sbjct: 1334 ATVNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQHNV 1392
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ T N A+++ L + Y + V A ++GGDG S
Sbjct: 1393 QVLST-----NKTSAELL-LPVKEDYIIEVKATTDGGDGTSS 1428
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 781 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVSDSGMFQCIAENKHGLVYS 839
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ + + P K + A + W + G + + E
Sbjct: 840 SAELKVVASAPDFSKNPMKKLVQAQVGSLVSLDCKPRASPRAQSFW-----KKGEVIVQE 894
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + DGG L+I N + ADAG Y C ++ GK + T ++V P
Sbjct: 895 QERISFLKDGG-LKIANVTKADAGTYTCTAENQFGKANGTTHLVVTEP 941
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 681 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 739
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 740 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 796
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + +D+G ++C+ ++ G + S + V+
Sbjct: 797 G---EALVLEE----RIQIENGALTISNLNVSDSGMFQCIAENKHGLVYSSAELKVVASA 849
Query: 179 P 179
P
Sbjct: 850 P 850
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P + + E +P+V P V G + + + +TW+P+ E
Sbjct: 1110 WVEYEFRVVANNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEE 1169
Query: 416 LIRENIRGRLIGHR---IKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
L G ++ R + W + +T Y RN +++ P + Y VKV
Sbjct: 1170 LQNGEGLGYVVAFRPLGVTTWIQTVVTSPDTPRYVF----RNESIM----PFSPYEVKVG 1221
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEGP S + + P PS V ++ + + V+W + ++GY+
Sbjct: 1222 VYNNKGEGPFSPVTTVFSAEEEPTVAPSQVFANSLSSSEIEVSWNTIPWKLSNGHLLGYE 1281
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
VR W ++ + GN A + L Y+ V A+++ G G S+
Sbjct: 1282 VRYWN-SGGREESSSKVRVAGNETSARLRGLKSNLAYYTAVRAYNSAGPGPFSA 1334
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL-LISPVSRDDSGIYSCT 61
E +T+ C +P P + W+ +G+ I S R GNL +I+P D+G Y C
Sbjct: 484 EDKKITLNCEARGSPSPHYRWQLNGSDIDMSLEHRYKLNGGNLVVINPNRNRDTGSYQCF 543
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 544 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 600
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV STV
Sbjct: 601 FNEY---PSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSTV 644
>gi|338714572|ref|XP_001497209.2| PREDICTED: contactin-6 [Equus caballus]
Length = 1030
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/587 (32%), Positives = 288/587 (49%), Gaps = 32/587 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 425 GGDIAIECKPIAFPRAAISWKRRAESLKQSKRVSLLEDGSLKIYNVTRSDAGSYTCIATN 484
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
G+ + G L+V LPP K+ + ++ L C + ++V ++W+ NG
Sbjct: 485 QFGVARNTGSLVVKE--RTIITLPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDV 542
Query: 124 IGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I DL + I G G L I N +G+Y C VK+T+ +S +IV GPP
Sbjct: 543 I---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAAADIIVRGPP 599
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V+V + T++ + W G+ N PI + + ART ++ W + +
Sbjct: 600 GPPDDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEIL 654
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ I GGGG
Sbjct: 655 SGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGS 714
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WE +P E QN Y I R T + E + + V R S +
Sbjct: 715 RSELVITWESIPEELQNGEEFGYIIMLRPVGSTTWIKERVPSVESSRF-VYRNESIIPLS 773
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVKV N G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 PFEVKVGVYNKEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT 833
Query: 421 IRGRLIGHRIKYWKEDNPE----ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
GR++G+ + YW +D+ E +T V + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 834 --GRVLGYEVLYWTDDSKESMIGKTRVSG-NVTTKN---ITGLKANTVYFASVRAYNTAG 887
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 TGPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQN 946
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
Q + I+ NT +V + Y + + S+GGDG S
Sbjct: 947 RQSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 987
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP + G + + + +TW P E
Sbjct: 669 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEE 728
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G +I R + KE P + ++ RN ++I P + + VKV
Sbjct: 729 LQNGEEFGYIIMLRPVGSTTWIKERVPSVESSRFV---YRNESII----PLSPFEVKVGV 781
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN GEG S + + PQ P ++ + + + V+W ++ + ++GY+V
Sbjct: 782 YNKEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV 841
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
W D S T + GN +I L Y V A++ G G S P
Sbjct: 842 LYWTDDSKESMIGKTRVS-GNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPP 894
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A +G +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 240 AAKGSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 297
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI P +EQ ++ + +L C A + + Y W
Sbjct: 298 CIAGNLRGRNLAKGQLIFYALPE-WEQKIQNTYLSIYDSLLWECKARGKP--NPWYTWLK 354
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 355 NGERLSPEE-------RIQIENGTLIITMLNLSDSGVYQCAAEN 391
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 13/175 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 340 CKARGKPNPWYTWLKNGERLSPEERIQI-ENGTLIITMLNLSDSGVYQCAAENKYQIIYA 398
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W +
Sbjct: 399 NAELRVLASAPDFSKNPIKKNSVVQVGGDIAIECKPIAFPRAAISWKRRAESLKQSKRVS 458
Query: 132 LETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
L ++ G L+I N + +DAG Y C+ V G + K I+ PP
Sbjct: 459 L------LEDGSLKIYNVTRSDAGSYTCIATNQFGVARNTGSLVVKERTIITLPP 507
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C + P P + WK++G +I + + G+L IS P + D G Y C ATN
Sbjct: 47 IILNCAADGYPSPHYRWKQNGRDIDFTMSYHYRLDGGSLAISSPQTDQDIGTYQCLATNP 106
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 107 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWTFND--- 162
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 163 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQKS------VQGPP 212
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 137 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 192
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 193 GNYTCFITNKEAQKSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKGSSVKLECFA 252
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 253 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 304
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I P
Sbjct: 305 GRNLAKGQLIFYALP 319
>gi|410920627|ref|XP_003973785.1| PREDICTED: contactin-3-like [Takifugu rubripes]
Length = 1027
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 282/587 (48%), Gaps = 24/587 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C PEA P +WKK I+ R + NG L I+ +R D+G Y+C
Sbjct: 425 ARTGSEVTLECKPEAWPPAISLWKKGNEILQRAERMTLLPNGTLRIANATRQDAGSYTCV 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G+L++ P+ P I + L C ++ LDV++ W NG
Sbjct: 485 AKNQFGTASTTGKLLITE-PTRITMRPTNTEIIVGESAVLPCQIASDPALDVSFSWAFNG 543
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D N E ++ G L+ I N + G+Y C++ + V +ST ++V+GPP
Sbjct: 544 QLIDFQRDGNHFERVGGSVSGDLM-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKGPP 602
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V V E+ ++A + WT G NG PIT Y I ART + W + +
Sbjct: 603 GPPDKVTVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVI 657
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + L W YEF+V+A N +G GEPS S + T P AP+ +GGGGG
Sbjct: 658 NGNLLTATVVGLNAWVEYEFRVVARNTVGLGEPSPASTKTRTEDSIPDTAPTDVGGGGGT 717
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WEP+P E QN Y I +R + + G +G V R + ++
Sbjct: 718 KSELVITWEPVPEELQNGDGFGYIIAFRPLGLVTWTRAAISTPG-IGRYVFRNDTIPAFS 776
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVKV A N+ G GP S + T++SAE++P VAP+ V +R ++ I V W + + E
Sbjct: 777 PFEVKVGAYNNRGEGPFSSIATVYSAEEVPSVAPKRVRTRSVSAVQIEVIWEALPALPE- 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEG 478
R++G+ + YW++D +T R + N+ + I GL+ T YY+ V A+N AG G
Sbjct: 836 ---RVLGYEVVYWEDDTKPDTVGKV--RISGNYTVVNITGLKASTVYYLSVAAFNTAGPG 890
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P+S T P + P + I +T+ + W V E + GY V +
Sbjct: 891 PQSVPINSTTKEPPPDRAPHNIQWTMIG-STLSLHWDPVIAMETESKVTGYLVLL----- 944
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+ ND N ++ L+ Y ++V A S GG+G S P
Sbjct: 945 KKNHYNDVTALFTNKTAVELT-LNANSNYLIQVKAMSEGGEGVGSEP 990
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + + GR +I ENG L I+ ++ DSG+Y C A N HG+ S
Sbjct: 343 CKANGKPKPSYSWLKNGEQLAAEGRIQI-ENGALSIAALNLSDSGMYQCVAENKHGVIYS 401
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
+L+VL P + + P K + A ++ E +W + GN L
Sbjct: 402 SAQLMVLASPPSFSKSPLKALLKARTGSEVTLECKPEAWPPAISLW-----KKGNEILQR 456
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + + G L I NA+ DAG Y CV K+ G ST +++ P
Sbjct: 457 AERMTL-LPNGTLRIANATRQDAGSYTCVAKNQFGTASTTGKLLITEP 503
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 11/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + V + C P P+ W++ + + N L I ++D+G Y C
Sbjct: 243 AAKESAVRLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPNFQQEDAGTYECV 302
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL H ++ ++ NL C A+ + +Y W NG
Sbjct: 303 AENWRGKNAARGRL-SFHAKPHWLLTMADTALSVEANLFWECKANGKP--KPSYSWLKNG 359
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180
++ I I+ G L I + +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 360 EQLAAEG-------RIQIENGALSIAALNLSDSGMYQCVAENKHGVIYSSAQLMVLASPP 412
Query: 181 GL 182
Sbjct: 413 SF 414
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSRD-DSGIYSCTATNVH 66
TI C E +P P++ W +G +I G R+ G+L+IS + +D D+G+Y CTA N
Sbjct: 50 TITCEAEGSPPPQYRWSLNGTVIDPGNDYRRHMSGGSLIISDLDKDQDTGVYQCTAVNTW 109
Query: 67 GMDES-KGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV-R 123
G S + L + ++ Q + + + + L C ++ Y W N
Sbjct: 110 GAVLSRRASLRFAYLDNFKSQADRSAVHVREGQGVVLLCGPPVNS-GELTYAWIFNEYPH 168
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGPPG 181
D I+ + G L + +D G Y CVV +TV K+ + T +V G
Sbjct: 169 FVQQDSRRF----ISQETGNLYVAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRTDG 224
Query: 182 LPGGVQ-VVEVH 192
+ G + +EVH
Sbjct: 225 VMGEYEPKIEVH 236
>gi|354465594|ref|XP_003495264.1| PREDICTED: contactin-3, partial [Cricetulus griseus]
Length = 712
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R +G L I V++ D+G Y+CTA N
Sbjct: 108 GSLVILDCKPRASPRALSFWKKGDTMVREQSRISFLNDGGLKILNVTKADAGTYTCTAEN 167
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 168 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 226
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 227 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 285
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W V+ + + +D T R
Sbjct: 286 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQTVT--TVPEVIDGKT-R 342
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+E L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +
Sbjct: 343 TATVVE--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 400
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 401 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 459
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + ++ +S+ I V+WN I N G
Sbjct: 460 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSRISAQSLSSSEIEVSWNTIPWKLSN--G 517
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ + ++ GL+ + YY V AYN+AG GP S
Sbjct: 518 HLLGYEVRYWNNGGEEESSSKMKVAGNQTSTVLQGLKSNLAYYTAVRAYNSAGAGPFSAT 577
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V I T V + W V E + GYKV Q+ +
Sbjct: 578 VNATTKKTPPSQPPGNV-IWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNSVQV 636
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 637 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 670
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 23 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYS 81
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ + + P K + + W + G+ + E
Sbjct: 82 SAELKVVASAPDFSRNPMKKLVQVQVGSLVILDCKPRASPRALSFW-----KKGDTMVRE 136
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ DGG L+I N + ADAG Y C ++ GK + T ++V P
Sbjct: 137 QSRISFLNDGG-LKILNVTKADAGTYTCTAENQFGKANGTTHLVVTEP 183
>gi|348575287|ref|XP_003473421.1| PREDICTED: contactin-6-like [Cavia porcellus]
Length = 1067
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 289/585 (49%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 463 GGDITIECKPNAFPRAAISWKRGTENVRQSKRVFLSEDGSLKIHNVTRSDAGPYTCVATN 522
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W+ NGV I
Sbjct: 523 QFGNAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVIFVWSFNGVII 581
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + T I G G L I N + +G+Y C V++T+ +S +IV GPPG
Sbjct: 582 ---DLQKRVTHFERIGGESVGDLMIRNIQLSHSGKYLCTVQTTLESLSAVADIIVRGPPG 638
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ I W G N PI + + RT ++ W + +
Sbjct: 639 PPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILN 693
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L W YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 694 GQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGGR 753
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 754 YELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVALVESSRF-VYRNESIMSLSP 812
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G GP S + ++S ED PQ+AP+G+ + F+++ + V+WN + R
Sbjct: 813 FEVKVGVYNNEGEGPLSTMSIVYSGEDEPQLAPRGMSVQSFSASEMEVSWNAVAWNRNT- 871
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E T + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 872 -GRVLGYEVLYWTDDSKESTVGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 927
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K ++ + + + W +V E ++GYK+ + Q
Sbjct: 928 PSSLPVNVTTKKSPPSQPPANIAWK-LSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQ 986
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 987 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 1025
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 140/601 (23%), Positives = 225/601 (37%), Gaps = 73/601 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P ++W K+G + S R +I ENG L IS ++ DSGIY C A N + + +
Sbjct: 378 CKASGKPNPWYMWLKNGERLNSEERIQI-ENGTLTISMLNMSDSGIYQCAAENKYQIIYA 436
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G ++ +
Sbjct: 437 NAELRVLASAPDFSKSPIKKNSIVQIGGDITIECKPNAFPRAAISWKR-----GTENVRQ 491
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKS------TVGKISTKTTVIVEGPPG---- 181
+ ++ DG L +I N + +DAG Y CV + G + K ++ PP
Sbjct: 492 SKRVFLSEDGSL-KIHNVTRSDAGPYTCVATNQFGNAKNTGSLIVKERTVITVPPSKMDV 550
Query: 182 -------LPGGVQVVEVHKTSATIQWTDGATNG------RPITHYKIIARTNWNSTWFNV 228
LP QV W + NG + +TH++ I + V
Sbjct: 551 TVGESIVLP--CQVSHDPSIEVIFVW---SFNGVIIDLQKRVTHFERIGGES-------V 598
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ +I ++G+ +++ L S ++ G P P + +
Sbjct: 599 GDLMIRNIQLSHSGKYLCTVQTTLESLSAVADIIVRG---------PPGPPEDVRVEHIS 649
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 347
S+I SW P P N+P + + R +Q+ T+ E N
Sbjct: 650 STTSQI------------SWRPGP--DNNSPIQIFTVQTRTPFSVGWQAVATVPEILNGQ 695
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTA 406
+ + EYE +V A N +G G S+ + + +P VAP + G
Sbjct: 696 TYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGGRYE 755
Query: 407 INVTWN--PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P EL G +I R E+ A+ SR I+ L P
Sbjct: 756 LVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVALVESSRFVYRNESIMSLSP--- 812
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
+ VKV YNN GEGP S + + PQ P + ++ + + + V+W V+ +
Sbjct: 813 FEVKVGVYNNEGEGPLSTMSIVYSGEDEPQLAPRGMSVQSFSASEMEVSWNAVAWNRNTG 872
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++GY+V W D S + GN +I L Y V A++ G G S
Sbjct: 873 RVLGYEVLYWTDDSKESTVGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSL 931
Query: 585 P 585
P
Sbjct: 932 P 932
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A + +V + C P P W++ DG+++ G + L I +D G Y C
Sbjct: 278 AAKDSSVKLECFALGNPVPDISWRRLDGSLL-PGKVKHSKSQAILEIPNFQEEDEGFYEC 336
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y+W N
Sbjct: 337 IAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTHLSIYDSLYWECKASGKP--NPWYMWLKN 393
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
G R+ + + I I+ G L I+ + +D+G Y+C ++
Sbjct: 394 GERLNSEE-------RIQIENGTLTISMLNMSDSGIYQCAAEN 429
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I + + G L IS P + D G Y C ATNV
Sbjct: 85 IILNCAASGYPSPHYRWKQNGTYIDFTRNYHYKLDGGRLAISSPHTDQDIGTYQCLATNV 144
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 145 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 200
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ + G L I +D G Y C V + + S V+GPP
Sbjct: 201 NPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRS------VQGPP 250
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 55
EG V + C P P F W + N + ++ F E GNL I+ V D
Sbjct: 175 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDV 230
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 231 GNYTCFVTNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 290
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ + G + ++ + +LEI N D G YEC+ +
Sbjct: 291 LGNPVPDISWRRLDGSLLPGKVKHSKSQ--------AILEIPNFQEEDEGFYECIAGNLR 342
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 343 GRNLAKGQLIFYAPP 357
>gi|403270430|ref|XP_003927185.1| PREDICTED: contactin-6 [Saimiri boliviensis boliviensis]
Length = 1029
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 293/623 (47%), Gaps = 29/623 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRAAISWKRGMETLRQSKRIFLLEDGSLKIYNVTRSDAGSYTCMATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V +IW NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPININGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKEKVAS-AESSRFVYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV ND G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEGP 479
GR++G+ + YW +D+ E ++ R T N I GL+ +T Y+ V AYN AG GP
Sbjct: 833 -GRVLGYEVLYWTDDSKE--SMIGKIRVTGNITTKNITGLKANTIYFASVRAYNTAGTGP 889
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 890 SSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQS 948
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ I+ NT +V + Y + + S+GGDG S ++ + S
Sbjct: 949 KTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLSS 999
Query: 600 GSPALYSASTTLLLVMSSTLYIF 622
L ST L ++ Y F
Sbjct: 1000 RGIQLLEPSTHFLSIVIVIFYCF 1022
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K + +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRWDGSPLP--GKVKYSKTQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + +L C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W M+
Sbjct: 398 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR------GMETLR 451
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 452 QSKRIFLLEDGSLKIYNVTRSDAGSYTCMATNQFGTAKNTGSLIVK 497
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRWDGSPLPGKVKYSKTQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNV 65
+ + C P P + WK++G +I + E G+L IS D G Y C ATN+
Sbjct: 46 IILNCAANGHPSPHYRWKQNGTDIDFTVSYHYRLEGGSLAISSPHTDQVIGTYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
>gi|194378322|dbj|BAG57911.1| unnamed protein product [Homo sapiens]
Length = 956
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 352 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 412 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 471 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 528 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 583 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 643 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV ND G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 914
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G SE + + +P VAP + G + + + +TW I
Sbjct: 596 WVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEE 655
Query: 418 RENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+N G G+ I + W ++ + ++V RN ++I P + + VKV
Sbjct: 656 LQN--GEGFGYIIMFRPVGSTTWSKE--KVSSVESSRFVYRNESII----PLSPFEVKVG 707
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YN+ GEG S + + PQ P ++ + + + V+W ++ + ++GY+
Sbjct: 708 VYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNTGRVLGYE 767
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
V W D S + GN +I L Y V A++ G G S P
Sbjct: 768 VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPV 822
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 225 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTHLSIYDNLLWECKASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 326 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 380
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 381 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 425
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLI-SPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ G+L I SP + D G+Y C ATN+ G S K +L + + + +++ +
Sbjct: 7 LDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E ++ + G L I +D G Y
Sbjct: 67 GVVLLCGP-PPHFGDLSYAWTFND---NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|327266142|ref|XP_003217865.1| PREDICTED: contactin-6-like [Anolis carolinensis]
Length = 1036
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 293/623 (47%), Gaps = 30/623 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG +TI C P+A+PK WKK + R I ++G+L I V++ D+GIY+C A N
Sbjct: 420 GGEITIECKPDASPKAAITWKKGTESLKQSKRICILDDGSLKIYNVTKSDAGIYTCIAMN 479
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + G LIV + P + + ++ L C + ++VA+IW+ NG I
Sbjct: 480 QFGVARNSGNLIVKER-TIINTPPSNMDVTVGESIVLPCQVSKDPSVEVAFIWSFNGDVI 538
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ E G L+ I N +G+Y C V++ + +S +IV G PG P
Sbjct: 539 DFKRKITHFERAGGESVGDLM-IRNIQLNHSGKYTCTVQTAMDILSETAEIIVRGTPGPP 597
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRYT 241
V + V T+A + W G N PI Y I RT ++ W VS VI
Sbjct: 598 KDVSIEHVSSTTAVLNWRSGTDNNSPIQIYTIQTRTPFSVGWQAVSTVPEVIN------- 650
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
GR + L PW YEF+V+AGN +G GEPS+PS T A P AP+ + GGGG
Sbjct: 651 GRTHTATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPANVSGGGGSR 710
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN Y I +R T + ++ + + R S
Sbjct: 711 SELVITWEPIPEELQNGDGFGYIIMFRPLGSTSW-TKAVAASVEASKYIYRNDSITPLFP 769
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N G G S + ++S ED PQ+AP G + +++ + V+WNP+ R
Sbjct: 770 FEVKVGVFNHEGVGTLSPIYIVYSGEDEPQIAPTGASVQSISASEMEVSWNPVAWNRHT- 828
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ + T + T RN I L+P+T Y+ V A+N AG G
Sbjct: 829 -GRVLGYEVLYWTDDSRDSTTSKVKVSGNITVRN---ITNLKPNTLYFASVRAFNTAGTG 884
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P + P+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 885 PSSVPVNVTTRKSPPSQRPANIAWKLTN-SKICLNWEHVKTMENESQVLGYKILYRQNRQ 943
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GG+G S M
Sbjct: 944 STTH----ILETNNTSAELLVPFE--EDYLIEIRTMSDGGEGSSSEEIRIPTMSSLS--S 995
Query: 599 SGSPALYSASTTLLLVMSSTLYI 621
G+ YS T++ + S +YI
Sbjct: 996 RGTQVCYSEVYTIITKIISLIYI 1018
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 145/604 (24%), Positives = 234/604 (38%), Gaps = 77/604 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L I+ ++ DSG+Y C A N +G S
Sbjct: 335 CKATGKPMPSYYWLKNGQPLSPEERIQI-ENGTLTITMLNISDSGLYQCVAENKYGSIYS 393
Query: 72 KGRL-IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130
L ++ P + + L KI++ H ++ + A W + G L
Sbjct: 394 NAELRVIASAPDFSKNLMKKISV-VHMGGEITIECKPDASPKAAITW-----KKGTESLK 447
Query: 131 ELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG--- 181
+ + I +D G L+I N + +DAG Y C+ V G + K I+ PP
Sbjct: 448 QSKRICI-LDDGSLKIYNVTKSDAGIYTCIAMNQFGVARNSGNLIVKERTIINTPPSNMD 506
Query: 182 --------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSE 230
LP QV + W+ D R ITH++ R S V +
Sbjct: 507 VTVGESIVLP--CQVSKDPSVEVAFIWSFNGDVIDFKRKITHFE---RAGGES----VGD 557
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
+I ++G+ +++ + S ++ G +P P P D +
Sbjct: 558 LMIRNIQLNHSGKYTCTVQTAMDILSETAEIIVRG---------TPGP----PKDVSIEH 604
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIA 349
S ++W N+P Y I R +Q+ T+ E N
Sbjct: 605 VSSTTA--------VLNWR--SGTDNNSPIQIYTIQTRTPFSVGWQAVSTVPEVINGRTH 654
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+ + EYE +V A N VG G P + + + +P VAP V G + + +
Sbjct: 655 TATVVDLNPWVEYEFRVVAGNSVGIGEPSAPSELLRTKASIPTVAPANVSGGGGSRSELV 714
Query: 409 VTWNPI--ELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+TW PI EL + G +I R + K A Y+ R + P
Sbjct: 715 ITWEPIPEELQNGDGFGYIIMFRPLGSTSWTKAVAASVEASKYIYRND-------SITPL 767
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ VKV +N+ G G S Y+ + PQ P+ ++ I+ + + V+W V+ +
Sbjct: 768 FPFEVKVGVFNHEGVGTLSPIYIVYSGEDEPQIAPTGASVQSISASEMEVSWNPVAWNRH 827
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
++GY+V W D S + + GN +I +L P Y V AF+ G G
Sbjct: 828 TGRVLGYEVLYWTDDSRDSTTSKVKVS-GNITVRNITNLKPNTLYFASVRAFNTAGTGPS 886
Query: 583 SSPA 586
S P
Sbjct: 887 SVPV 890
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYS 59
+G ++ + C P P W++ DGN + RKI G L I ++D Y
Sbjct: 237 VAKGSSIKLECFALGNPVPSISWRRIDGNPLS----RKISTFKGILEIPNFQQEDEATYE 292
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A NV G + ++G+L + P + + L ++ + C A + + +Y W
Sbjct: 293 CIAGNVRGRNAARGQLFIYALPEWNKGL-ENAHVSLYDTFMWECKATGKPM--PSYYWLK 349
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE 177
NG + + I I+ G L IT + +D+G Y+CV ++ G I + + VI
Sbjct: 350 NGQPLSPEE-------RIQIENGTLTITMLNISDSGLYQCVAENKYGSIYSNAELRVIAS 402
Query: 178 GP 179
P
Sbjct: 403 AP 404
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 26/224 (11%)
Query: 4 EGGNVTIFCNPEAAP-KPKFVWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + W + N + RR + E GNL I+ V D G Y+
Sbjct: 134 EGQGVVLLCGPPPHHGDLSYAWIFNDNPLYVQEDSRRFVSQETGNLYIAKVEPSDVGNYT 193
Query: 60 CTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C N +G +VL P + P I +A +++L C A
Sbjct: 194 CVVINTEAKQSVQGPPTPLVLRSDGVMGEYEPKIEVRFPEAIQVAKGSSIKLECFALGNP 253
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ +D N L + I+ G+LEI N D YEC+ + G+ +
Sbjct: 254 VPSISW---------RRIDGNPL-SRKISTFKGILEIPNFQQEDEATYECIAGNVRGRNA 303
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 213
+ + + P G++ V T W AT G+P+ Y
Sbjct: 304 ARGQLFIYALPEWNKGLENAHV-SLYDTFMWECKAT-GKPMPSY 345
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCT 61
E V + C P P + WK++G I + + G+L I +P + D G Y C
Sbjct: 40 EDPEVILNCTGRGRPSPFYRWKRNGTDIDLTMSYHYRLDGGSLAINNPHKKQDIGTYQCL 99
Query: 62 ATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TN G S K +L + ++ + +++ + + L C D++Y W N
Sbjct: 100 VTNSFGTILSRKAKLQFAYLENFETKARSTVSVREGQGVVLLCGPPPHH-GDLSYAWIFN 158
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y CVV +T K S V+GPP
Sbjct: 159 D---NPLYVQEDSRRFVSQETGNLYIAKVEPSDVGNYTCVVINTEAKQS------VQGPP 209
>gi|6981246|ref|NP_037357.1| contactin-6 precursor [Rattus norvegicus]
gi|55976162|sp|P97528.1|CNTN6_RAT RecName: Full=Contactin-6; AltName: Full=Neural recognition molecule
NB-3; Flags: Precursor
gi|1752645|dbj|BAA13320.1| NB-3 [Rattus norvegicus]
Length = 1028
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 300/627 (47%), Gaps = 36/627 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN Y I +R T + E + + + R S +
Sbjct: 715 SELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED P++AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
Q + +T N A++ L P + Y + + S+GGDG S ++ +
Sbjct: 947 QSKTHVLET-----NNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRIPKMSS 996
Query: 597 FKSGSPALYSASTTLLLVMSSTLYIFV 623
S + ST L M Y FV
Sbjct: 997 LSSVGVQILKPSTQ-FLTMVGFFYCFV 1022
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R + ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGERLNTEERIQT-ENGTLIITMLNVSDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y CV + G + ++IV+
Sbjct: 451 KQSKRV-FFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK 497
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + +V + C P P W++ G + L I ++D G Y C
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECV 298
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W NG
Sbjct: 299 AGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNG 355
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
R+ + I + G L IT + +D+G Y+C ++
Sbjct: 356 ERLNTEE-------RIQTENGTLIITMLNVSDSGIYQCAAEN 390
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I S + G+L IS P + D GIY C ATN
Sbjct: 46 IILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGEL---SYDWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ + G L I +D G Y C V + S V+GPP
Sbjct: 162 --NPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDS 55
EG V + C P P F W + N + RR + +N GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + + + LEI D G YECV +
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|296225698|ref|XP_002758609.1| PREDICTED: contactin-3 [Callithrix jacchus]
Length = 1028
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 285/580 (49%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSFWKKGDMNVQEHERITLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W ++ + + +D G+
Sbjct: 602 ENVRVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A ++GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNSGGKEESSSKVKVAGNETSARLLGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ ++
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNAQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 143/630 (22%), Positives = 239/630 (37%), Gaps = 104/630 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I+ ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIANFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179
G + + I I+ G L I+N S D+G ++C+ ++ G + S+ +V
Sbjct: 355 GAAL-------VLEERIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P V ++ D P AR+ W NV EH +R
Sbjct: 408 PDFSKNPMKKLVQVQVGSLVSLDCKPRASP------RARSFWKKGDMNVQEH------ER 455
Query: 240 YTGRKEASIENVLVPWSTY-EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
T K+ ++ V + + +A N+ +G+ + + T + APS +
Sbjct: 456 ITLLKDGGLKIANVTKADAGTYTCMAENQ--FGKANGTTHLVVTEPTRITLAPSNM---D 510
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIAV 350
+G+ I LP + Q+ P + W KK+ + F+ G++ I
Sbjct: 511 VSVGESVI----LPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRN 566
Query: 351 VRIP-SEFYYTEYEVKVQAINDVG-------PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
+++ S Y + V +++ PGP V +++ Q + G
Sbjct: 567 IQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV----RVDEITDTTAQLSWKEGT 622
Query: 403 NS------------TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
++ T +V W I + E I G+
Sbjct: 623 DNHSPVISYSIQARTPFSVGWQTITTVPEVIDGK-------------------------- 656
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
+ A +V L P +Y +V+A N G G P RT P+ PPS V+ G + +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVD-----QDMSRANDTIIPVGNTLDADIVDLSPG 564
+ +TW V + GY V + Q + + DT P + IV SP
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDT--PRYVFRNESIVPYSP- 773
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
Y ++V ++N G+G S F EE
Sbjct: 774 --YEVKVGVYNNKGEGPFSPVTTVFSAEEE 801
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I + NG L+I+P D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTKMEHHYKLNGGNLLVINPNRNWDAGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 24/179 (13%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATN------VHG-----MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 108
C T+ V G M S G ++ + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLMLRSDG-VMGEYEPKIEVQFPETLPAAKGSTVKLECFALGN 254
Query: 109 ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 255 PIPQINWRRSDGLPFSSKIKLRKF--------NGVLEIANFQQEDAGSYECIAENSRGK 305
>gi|432859190|ref|XP_004069057.1| PREDICTED: contactin-2-like [Oryzias latipes]
Length = 1182
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 264/548 (48%), Gaps = 17/548 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPKP W + ++ + R + +G L I VSR D G Y+C
Sbjct: 577 AARGGQVMIECRPRAAPKPILFWSRGTELLANSSRITVAPDGTLWIRNVSRADEGKYTCF 636
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N+ L+C A + +D+ + W G
Sbjct: 637 AENYLGKANSTGHLSVRDA-TKITLAPSNADINQGENVTLQCHASHDPTMDLTFTWALKG 695
Query: 122 VRIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V +DL + I G G L I NA + AG + C ++ V S ++V
Sbjct: 696 VL---LDLEDPAGRYFRIQGQENIGDLLIVNAQLSQAGIFTCTAQTVVDSASASARLVVR 752
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
PPG PGG+ V V TS + W+ G N PI Y I+ +++ +S W + E
Sbjct: 753 APPGPPGGILVKMVTDTSVELWWSHGHDNHSPIGKYIIMGQSSLSSEWKKMRTEPANIE- 811
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E++ L+ W Y F+VIA N LG GEPS PS + T P APS +GGG
Sbjct: 812 ----GNAESARVIGLMAWMDYRFQVIASNILGKGEPSQPSARIRTQPAAPTVAPSGLGGG 867
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L ++W P+ RE QN Y + +R+K T SE + V S
Sbjct: 868 GGDHHELIVTWTPMAREYQNGDGFGYILAFRRKG-TAAWSEVRIPHVESSRHVYYNQSLA 926
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YT +EVK+QA N G GP S+ V + SAE+ P V P + + ++ I V+W P++ +
Sbjct: 927 PYTPFEVKIQAYNRKGVGPFSQTVEVHSAEEEPTVGPASINATALSAFEIQVSWEPVQQL 986
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
N G L G+ I+YW++ E A + A + GL+P T+Y+V V AYN+AG
Sbjct: 987 SAN--GILRGYEIRYWRQHEREAAADRVRTAGLEPTARVSGLRPSTRYHVAVFAYNSAGT 1044
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S R T + P +PP V K I + V V W +V+ E ++GYKV D
Sbjct: 1045 GPSSPRTTVTTRKPPPNRPPGNVSWK-IQGSQVAVRWDHVTALHNESAVLGYKVLYKHED 1103
Query: 538 QDMSRAND 545
Q + + D
Sbjct: 1104 QTVLKLLD 1111
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G VT+ C P PK W+K DG + G E L++ +S DD G+Y
Sbjct: 395 YALTGHTVTLECFAYGNPVPKLRWRKVDGLMPSKTGSSA--EGPTLILPDLSFDDEGVYE 452
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+ V P + Q+ + L C + + V W
Sbjct: 453 CEAYNSEGRDTHQGRISVQAQPDWV-QVMSDSEVEISSELLWSCLSSGKPRPSVR--WLR 509
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE 177
NG + D + ++G L+I++ + D+G Y+CV ++ G I S + V V+
Sbjct: 510 NGQPVITQD-------RVEVNGANLKISSLALDDSGMYQCVAENKHGTIYASAELRVQVQ 562
Query: 178 GP-----------PGLPGGVQVVEVHKTSA---TIQWTDG 203
P P GG ++E +A + W+ G
Sbjct: 563 APDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRG 602
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P W ++G + + R ++ NL IS ++ DDSG+Y C A N HG +
Sbjct: 495 CLSSGKPRPSVRWLRNGQPVITQDRVEV-NGANLKISSLALDDSGMYQCVAENKHGTIYA 553
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V + P + I A R Q+ W+ + N
Sbjct: 554 SAELRVQVQAPDFRLNPVRRLIPAARGGQVMIECRPRAAPKPILFWSRGTELLAN----- 608
Query: 132 LETPNINID-GGLLEITNASFADAGEYECVVKSTVGKIST 170
+ I + G L I N S AD G+Y C ++ +GK ++
Sbjct: 609 --SSRITVAPDGTLWIRNVSRADEGKYTCFAENYLGKANS 646
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G VT+ C A P + W +G + G R GNL+I SP D+G Y C N
Sbjct: 199 GKVTLSCQARANPAASYRWLLNGTEVPLGSERHTLVAGNLVISSPEPSRDTGSYQCLVIN 258
Query: 65 VHG 67
G
Sbjct: 259 RCG 261
>gi|395516504|ref|XP_003762427.1| PREDICTED: contactin-6 [Sarcophilus harrisii]
Length = 1017
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 284/583 (48%), Gaps = 24/583 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+V I C P+A+P+ W K +I R I E+G+L I V++ D+G Y+C A N
Sbjct: 413 GGDVVIECKPKASPRAMISWAKGSEMIRQSKRFFILEDGSLKIYNVTKLDAGTYTCIAMN 472
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L++ + PP++ + ++ L C + ++V + W NG
Sbjct: 473 QFGIAKTSGNLVIKER-TIITVPPPQMDVTVGESIVLPCQVFHDPSIEVVFTWYLNG--- 528
Query: 125 GNMDLNELETPNINIDGGL----LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
N+ + P+ GG L I +G+Y C+V++T+ +S +IV GPP
Sbjct: 529 -NVIDFQRGVPHFERIGGESVGDLMIREIQLNHSGKYVCMVETTLDNLSAVADIIVRGPP 587
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V++ + T++ + W G N PI Y I RT ++ W VS +
Sbjct: 588 GPPSNVRIENISSTTSQLCWRPGIDNNSPIQIYTIQTRTPFSVGWLAVSTIP-----EIL 642
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ IGGGGG
Sbjct: 643 NGKMHTATVVGLNPWVEYEFRVVAGNSIGIGEPSQPSKLLRTKAAVPVVAPTTIGGGGGS 702
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WE +P E QN Y I +R + ++ V R S +
Sbjct: 703 QSELVITWESIPEELQNGEGFGYIIMFRPVGSLTWTKASVSSV-EASKYVYRNESLIPLS 761
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVKV N+ G G S ++S ED PQ+AP G + F+++ ++++WN I R
Sbjct: 762 PFEVKVGVYNNEGEGTLSPATIVYSGEDEPQLAPTGASVQSFSASEVDISWNSIAWNRST 821
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
GR++G+ + YW ED+ E ++ I GL+ +T Y+ V AYN AG GP
Sbjct: 822 --GRVLGYEVLYWTEDSKETSSGKIRVSGNITTKSITGLKANTLYFATVRAYNTAGTGPS 879
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S+ T + P + PS + K N + + + W +V E ++GYK+ +
Sbjct: 880 SDLVNVTTKKSPPSQAPSNIAWKLKN-SKLCLNWEHVKTMENESDVLGYKILYRQ----- 933
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+R + T I N A+I+ + G+ Y + + S+GGDG S
Sbjct: 934 NRQSKTHILETNNTSAEIL-VPFGEDYIIEIRTVSDGGDGSSS 975
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P +VW K+G I R +I ENG+L+I+ ++ DSG Y C A N + +
Sbjct: 328 CRASGKPIPSYVWLKNGEPIVPEERIQI-ENGSLVITMLNVSDSGFYQCVAENKYQTIYA 386
Query: 72 KGRLIV-LHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V P + + KI++ ++ + C +++ +R
Sbjct: 387 NAELRVRASAPDFSKNPMQKISVVQVGGDVVIECKPKASPRAMISWAKGSEMIRQSKRFF 446
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
++ G L+I N + DAG Y C+ + T G + K I+ PP
Sbjct: 447 --------ILEDGSLKIYNVTKLDAGTYTCIAMNQFGIAKTSGNLVIKERTIITVPP 495
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 17/182 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG---SGGRRKIFENGNLLIS-PVSRDDSGIYS 59
E V + C P P + WK++G I S R I G+L IS P G Y
Sbjct: 31 EHSEVILNCAANGYPIPNYRWKQNGTDIDFTMSYHYRLI--GGSLAISNPYKAQAIGTYQ 88
Query: 60 CTATNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G + K +L + ++ + +++ A + + L C DV Y WT
Sbjct: 89 CLATNPLGTILSQKAKLQFAYIENFETKTRSTVSVLAGQGVVLLC-GPPPFFGDVYYAWT 147
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N + + E I+ + G L I +D G Y C V + + ++G
Sbjct: 148 FND---HPLPVQEDSRRFISQETGNLYIAKVEPSDVGNYTCFVTNMQAQKR------IQG 198
Query: 179 PP 180
PP
Sbjct: 199 PP 200
>gi|354489954|ref|XP_003507125.1| PREDICTED: contactin-6-like [Cricetulus griseus]
Length = 1028
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 300/634 (47%), Gaps = 47/634 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTESLRQSKRVFLLEDGSLKICNVTRSDAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGSLIVKEK-TVITTPPSKMDVTVGESIVLPCQVSHDPTMEVVFVWYFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVTTIPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPIVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E +A+V Y E
Sbjct: 715 SELVITWESIPEELQNGEGFGYIVMFRPVGSTTWMKER--------VALVESSRYIYRNE 766
Query: 362 -------YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I
Sbjct: 767 SIMPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAI 826
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAY 472
R GR++G+ + YW DN +E+ + SR + N I GL+ +T Y+ V AY
Sbjct: 827 AWNRNT--GRVLGYEVLYWT-DNSKESMIGK-SRVSGNVTTKNITGLRANTIYFASVRAY 882
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N AG GP S T + P +PP+ + K N + + + W +V E ++GYK+
Sbjct: 883 NTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKIL 941
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ Q + I+ NT +V + Y + + S+GGDG S ++
Sbjct: 942 YRQNRQSTAH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIP 992
Query: 593 EEKEFKSGSPALYSASTTLLLVMSSTLYIFVAFS 626
+ S +++ ST L S + IF F+
Sbjct: 993 KMSSLSSTGVQIFNPSTQFL----SMVAIFYCFA 1022
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLHPEERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K T + ++ + C + +++ + G L
Sbjct: 398 NAELRVLASAPDFSKNPIKKTSVVQVGGDISIECKPNAFPKASISW-------KRGTESL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + + ++ G L+I N + +DAG Y CV + G + ++IV+
Sbjct: 451 RQSKRVFL-LEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK 497
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + +V + C P P W++ DGN + G+ K ++ +L I ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPMP--GKVKYSKSQAILEIPEFHQEDEGYYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGERLHPEE-------RIQIENGTLIITMLNVSDSGIYQCAAEN 390
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I S + GNL I SP + D G Y C TN
Sbjct: 46 IILTCTANGYPSPHYRWKQNGTDIDFSMTYHYRLDGGNLAISSPRTDQDIGTYQCLVTNT 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + C D++Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGGTVLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ G L I +D G Y C V + S V+GPP
Sbjct: 162 NPLYVQEDKRRFVSQVTGNLYIAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 32/196 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIFE-NGNLLISPVSRDD 54
G+GG T+ C P P F W + N + RR + + GNL I+ V D
Sbjct: 137 GQGG--TVLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQVTGNLYIAKVEPSD 190
Query: 55 SGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCS 104
G Y+C TN +G L + P + P I A +++L C
Sbjct: 191 VGNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECF 250
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 164
A + D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 251 ALGNPVPDISWRRLDGNPMPGKVKYSKSQ--------AILEIPEFHQEDEGYYECIAGNL 302
Query: 165 VGKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 303 RGRNLAKGQLIFYAPP 318
>gi|149036846|gb|EDL91464.1| rCG56227 [Rattus norvegicus]
Length = 1041
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 300/627 (47%), Gaps = 36/627 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 437 GGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATN 496
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 497 QFGNGKSSGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI 555
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 556 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 612
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 613 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 667
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 668 GQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSR 727
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN Y I +R T + E + + + R S +
Sbjct: 728 SELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSP 786
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED P++AP+G + F+++ + V+WN I R
Sbjct: 787 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNT- 845
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 846 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 900
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 901 GPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 959
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
Q + +T N A++ L P + Y + + S+GGDG S ++ +
Sbjct: 960 QSKTHVLET-----NNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRIPKMSS 1009
Query: 597 FKSGSPALYSASTTLLLVMSSTLYIFV 623
S + ST L M Y FV
Sbjct: 1010 LSSVGVQILKPSTQ-FLTMVGFFYCFV 1035
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + +V + C P P W++ G + L I ++D G Y C
Sbjct: 250 AAKDSSVKLECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECV 309
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W NG
Sbjct: 310 AGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNG 366
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
R+ + I + G L IT + +D+G Y+C ++
Sbjct: 367 ERLNTEE-------RIQTENGTLIITMLNVSDSGIYQCAAEN 401
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R + ENG L+I+ ++ DSGIY C A N + +
Sbjct: 350 CKASGNPNPSYTWLKNGERLNTEERIQT-ENGTLIITMLNVSDSGIYQCAAENKYQTIYA 408
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHR----NLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L VL + + P K ++ + C + +++ + G
Sbjct: 409 NAELRVLASAPDFSKNPIKKXXXXXXXXGGDISIECKPNAFPKASISW-------KRGTE 461
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+L + + ++ G L+I N + +DAG Y CV + G + ++IV+
Sbjct: 462 NLKQSKRV-FFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK 510
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I S + G+L IS P + D GIY C ATN
Sbjct: 57 IILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 116
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 117 VGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGEL---SYDWTFND- 172
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ + G L I +D G Y C V + S V+GPP
Sbjct: 173 --NPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 222
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDS 55
EG V + C P P F W + N + RR + +N GNL I+ V D
Sbjct: 147 EGQGVVLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDV 202
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 203 GNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 262
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + + + LEI D G YECV +
Sbjct: 263 LGNPVPDISWRRLDGSPMPGKVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLR 314
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 315 GRNLAKGQLIFYAPP 329
>gi|426249263|ref|XP_004018369.1| PREDICTED: contactin-6 isoform 2 [Ovis aries]
Length = 956
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 285/586 (48%), Gaps = 30/586 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G+Y+C ATN
Sbjct: 352 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LI+ + P K+ + ++ L C + ++V ++W+ NG I
Sbjct: 412 QFGVAKNTGSLIIKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 471 ---DFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + S + W G+ N PI + I ART ++ W + +
Sbjct: 528 PPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ I GGGG
Sbjct: 583 GKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN + Y + R T + E + + + R + +
Sbjct: 643 SELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N G GP S I+S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSR---TTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNITTKN---ITGLKANTVYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQ--- 872
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMS 583
+R + T I N A++ L P + Y + + S+GGDG S
Sbjct: 873 --NRHSKTHILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSS 914
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 132/604 (21%), Positives = 229/604 (37%), Gaps = 79/604 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + + +
Sbjct: 267 CKASGKPDPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 326 NAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISW-------KRGIESL 378
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG-- 181
+ + + ++ G L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 379 RQSKRVFL-LEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSLIIKERTVITVPPSKM 437
Query: 182 ---------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVS 229
LP QV W+ D + + H++ I + V
Sbjct: 438 DVTVGESIVLP--CQVSHDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGDS-------VG 488
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+ +I ++G+ +++ +T E G+ + G P P T
Sbjct: 489 DLMIRNIQLNHSGKYLCTVK------TTLESLSADGDIIVRGPPGPPEDVRVTHISS--- 539
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGI 348
+SW P N+P + I R +Q+ T+ E N
Sbjct: 540 ------------ASCQLSWRP--GSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKT 585
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAI 407
+ + + EYE +V A N +G G S+ + + +P VAP + G + + +
Sbjct: 586 FNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSEL 645
Query: 408 NVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+TW P EL G ++ R + KE P + ++ R I+ L P
Sbjct: 646 IITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRFIYRNEN----IIPLSP 701
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ VKV YN GEGP S + + PQ P ++ + + + V+W ++ +
Sbjct: 702 ---FEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNR 758
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GY+V W D S + GN +I L Y V A++ G G
Sbjct: 759 NTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGP 817
Query: 582 MSSP 585
S P
Sbjct: 818 SSPP 821
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A + +V + C P P W++ DG+ + G + L I ++D G Y C
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPL-PGKVKYSKSQATLEIPNFQQEDEGFYEC 225
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N+ G + +KG+LI + P +EQ ++ + +L C A + D Y W N
Sbjct: 226 IASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGKP--DPWYTWLKN 282
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
G R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 283 GER-----LNPEE--RIQIENGTLIITMLNVSDSGIYQCAAEN 318
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCLITNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------ATLEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
>gi|426249261|ref|XP_004018368.1| PREDICTED: contactin-6 isoform 1 [Ovis aries]
Length = 1028
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 290/587 (49%), Gaps = 32/587 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G+Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGVYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LI+ + P K+ + ++ L C + ++V ++W+ NG I
Sbjct: 484 QFGVAKNTGSLIIKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DFKKGVAHFERIGGDSVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + S + W G+ N PI + I ART ++ W + +
Sbjct: 600 PPEDVRVTHISSASCQLSWRPGSDNNSPIQIFSIQARTPFSVGW-----QAVSTVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ I GGGG
Sbjct: 655 GKTFNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN + Y + R T + E + + + R + +
Sbjct: 715 SELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N G GP S I+S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW +D+ +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWTDDS-KESMIGKIRVSGNITTKN---ITGLKANTVYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQ-- 944
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMS 583
+R + T I N A++ L P + Y + + S+GGDG S
Sbjct: 945 ---NRHSKTHILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSS 986
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 132/605 (21%), Positives = 229/605 (37%), Gaps = 79/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + + +
Sbjct: 339 CKASGKPDPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 398 NAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISW-------KRGIESL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG-- 181
+ + + ++ G L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 451 RQSKRVFL-LEDGSLKIYNVTRSDAGVYTCIATNQFGVAKNTGSLIIKERTVITVPPSKM 509
Query: 182 ---------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVS 229
LP QV W+ D + + H++ I + V
Sbjct: 510 DVTVGESIVLP--CQVSHDPSIEVVFVWSFNGDVIDFKKGVAHFERIGGDS-------VG 560
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+ +I ++G+ +++ +T E G+ + G P P T
Sbjct: 561 DLMIRNIQLNHSGKYLCTVK------TTLESLSADGDIIVRGPPGPPEDVRVTHISS--- 611
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGI 348
+SW P N+P + I R +Q+ T+ E N
Sbjct: 612 ------------ASCQLSWRP--GSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKT 657
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAI 407
+ + + EYE +V A N +G G S+ + + +P VAP + G + + +
Sbjct: 658 FNATVVALNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSEL 717
Query: 408 NVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+TW P EL G ++ R + KE P + ++ R I+ L P
Sbjct: 718 IITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRFIYRNEN----IIPLSP 773
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ VKV YN GEGP S + + PQ P ++ + + + V+W ++ +
Sbjct: 774 ---FEVKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNR 830
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GY+V W D S + GN +I L Y V A++ G G
Sbjct: 831 NTGRVLGYEVLYWTDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGP 889
Query: 582 MSSPA 586
S P
Sbjct: 890 SSPPV 894
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A + +V + C P P W++ DG+ + G + L I ++D G Y C
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPL-PGKVKYSKSQATLEIPNFQQEDEGFYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N+ G + +KG+LI + P +EQ ++ + +L C A + D Y W N
Sbjct: 298 IASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGKP--DPWYTWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
G R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 355 GER-----LNPEE--RIQIENGTLIITMLNVSDSGIYQCAAEN 390
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWIFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCLITNKEAQRRVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------ATLEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I + + G+L IS P + D G Y C ATN
Sbjct: 46 IILNCAANGYPLPHYRWKQNGADIDFTMSYHYRLDGGSLAISSPRTDQDIGTYQCLATNS 105
Query: 66 HG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + K +L + + + +++ + + L C D++Y W N
Sbjct: 106 LGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWIFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C++ + + V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCLITNKEAQRR------VQGPP 211
>gi|348575281|ref|XP_003473418.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Cavia porcellus]
Length = 1019
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 285/580 (49%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R ++G L I+ V++ DSG Y+CTA N
Sbjct: 415 GSLVNLDCKPRASPRALCSWKKGDAVVQEHERVSFLKDGGLKIANVTKADSGTYTCTAEN 474
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + L+V+ P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 475 QFG-KANGTTLLVVTEPTRITLAPSNMDVSVGESIILPCQVKHDPLLDIMFTWYFNGALT 533
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 534 DFKKDGSHFEKVGGSSSGDLM-IRNIQLRHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 592
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+T Y I ART ++ W V+ + + +D G+
Sbjct: 593 KNVKVDEITDTTAQLSWREGIDNHSPVTSYAIQARTPFSVGWQTVT--TVPEVID---GK 647
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 648 THTATVVELNPWVEYEFRVVASNKIGGGEPSFPSEKVRTEEAVPEVPPSEVNGGGGSRSE 707
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 708 LVITWDPVPEELQNGEGFGYVVAFRPLGITTW-IQTVVTSPDTPRYVFRNESIVPFSPYE 766
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V WN I N G
Sbjct: 767 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSAHSLSSSEIEVAWNTIPWKLSN--G 824
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 825 HLLGYEVRYWNNGGEEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 884
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + + V + W V + E + GYKV Q+ +
Sbjct: 885 VNATTKKTPPSQPPGNV-VWNATDSKVLLNWEQVKATPNESEVTGYKVFYRTSSQNSVQV 943
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 944 LNT-----NKTSAELL-LPFKEDYIIEVKATTDGGDGTSS 977
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 330 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYS 388
Query: 72 KGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P ++ + + NL + A L W + G+
Sbjct: 389 SAELKVVASAPDFSKNPMRNLIRVQVGSLVNLDCKPRASPRALCS----W-----KKGDA 439
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + AD+G Y C ++ GK + T ++V P
Sbjct: 440 VVQEHERVSFLKDGG-LKIANVTKADSGTYTCTAENQFGKANGTTLLVVTEP 490
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 230 AAKGATVKLECFALGNPVPQINWRRSDGMPFPSKIKLRKF-NGVLEIPAFQQEDAGSYEC 288
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ Q + +A +L C A + +Y W N
Sbjct: 289 IAENSRGKNVARGRLTYYAKP-HWVQFIKDMEMAVEDSLYWECRASGKP--KPSYRWLKN 345
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 346 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 398
Query: 179 P 179
P
Sbjct: 399 P 399
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C + P P + W+ +G NI S R GNL++ +R D+G Y C
Sbjct: 33 EDKKITLSCEAKGNPSPHYRWQLNGSNIDMSMEHRYKLNGGNLVVFNPNRSWDTGSYQCF 92
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 93 ATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 149
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV S V
Sbjct: 150 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMV 193
>gi|426339222|ref|XP_004033557.1| PREDICTED: contactin-6 isoform 3 [Gorilla gorilla gorilla]
Length = 1019
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 297/625 (47%), Gaps = 33/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 415 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 474
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 475 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 533
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 534 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 590
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 591 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 645
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 646 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSR 705
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 706 SELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 764
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 765 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 823
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW +D+ +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 824 -GRVLGYEVLYWTDDS-KESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGT 878
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 879 GPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 937
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 938 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSL 988
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 989 SSRGIQFLEPSTHFLSIVIVIFYCF 1013
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 230 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 287
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 288 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 344
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 345 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 381
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 330 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 388
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 389 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 443
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 444 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 488
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C + P P + WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 37 VILNCAANSYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 96
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 97 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 152
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 153 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 202
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 127 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 182
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 183 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 242
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 243 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 294
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 295 GRNLAKGQLIFYAPP 309
>gi|358418120|ref|XP_600040.6| PREDICTED: contactin-4 [Bos taurus]
Length = 1026
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 295/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP WKK +++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVHTWKKGRDVLKENERITISEDGSLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + L++ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLNIVFTWSFNGRLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W V + + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAV--NTVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+ E +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITCETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPM----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHDDKEENARKIRTIGNQTSTKITNLKGSALYHLAVKAYNSAGTGPASA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWSRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGA 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GPSTSNACTLSAISTIMISLTA 1022
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I + RR NG L I ++D+G+Y C
Sbjct: 238 AKGTTVKLECFALGNPVPTIIWRRADGKPIATKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +KG+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVAKGQLTFYAQPNWSQKI-NDIHVAIEENVFWECKANGRP--KPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I+I+ G L IT + +DAG Y+CV ++ G I S + +VI GP
Sbjct: 354 EPLLTRD-------RIHIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAVGP 406
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P D+G+Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGMYQCI 101
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAY 115
ATN G S+ + +Y E P+ +++ + + L C AH+ EL +Y
Sbjct: 102 ATNSFGTIVSREAKLQF---AYLENFKPRTRSTVSVRQGQGMVLLCGPPAHSGEL---SY 155
Query: 116 IWTHNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 156 AWIFN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV--- 200
Query: 169 STKTTVIVEGPP 180
T V GPP
Sbjct: 201 ---TNQKVLGPP 209
>gi|397522455|ref|XP_003831282.1| PREDICTED: contactin-6 isoform 1 [Pan paniscus]
Length = 1028
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 293/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 998
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 999 SRGIQFLEPSTHFLSIVIVIFYCF 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GRETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P++ WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 46 VVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|426339218|ref|XP_004033555.1| PREDICTED: contactin-6 isoform 1 [Gorilla gorilla gorilla]
Length = 1028
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 293/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 998
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 999 SRGIQFLEPSTHFLSIVIVIFYCF 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C + P P + WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 46 VILNCAANSYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|200057|gb|AAA17403.1| neuronal glycoprotein [Mus musculus]
Length = 1028
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R +G L I V++ D+G Y+CTA N
Sbjct: 424 GSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W +V + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+++A N++G GEPS PS + T P APS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ + A++ GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L I+ ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTITNLNVTDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ + + P K + + W + G+M + E
Sbjct: 398 SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFW-----KKGDMMVRE 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ DGG L+I N + ADAG Y C ++ GK + T ++V P
Sbjct: 453 QARVSFLNDGG-LKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEP 499
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEG 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N D L ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYPSFVEEDSRRL----VSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|426339220|ref|XP_004033556.1| PREDICTED: contactin-6 isoform 2 [Gorilla gorilla gorilla]
Length = 956
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 293/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 352 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 412 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 471 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 528 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 583 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIHGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 643 SELVITWESIPEELQNGDGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 926
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 927 SRGIQFLEPSTHFLSIVIVIFYCF 950
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 225 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 326 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 380
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 381 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 425
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLI-SPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ G+L I SP + D G+Y C ATN+ G S K +L + + + +++ +
Sbjct: 7 LDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E ++ + G L I +D G Y
Sbjct: 67 GVVLLCGP-PPHFGDLSYAWTFND---NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|7209914|dbj|BAA92367.1| neural recognition molecule NB-3 [Mus musculus]
Length = 1028
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 194/625 (31%), Positives = 296/625 (47%), Gaps = 34/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G L+V + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + V W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCVNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S +M
Sbjct: 947 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSS---- 996
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S + S +T L M Y F
Sbjct: 997 LSSTGVQISKPSTQSLSMVGVFYCF 1021
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 133/605 (21%), Positives = 234/605 (38%), Gaps = 81/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQI-ENGTLIITMLNISDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVV-------KSTVGKISTKTTVIVEGPPGL 182
+ + + ++ G L+I N + ADAG Y CV KS+ G + + T+I P +
Sbjct: 451 KQSKRV-LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKM 509
Query: 183 PGGV--------QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
V QV W D + + H++ I +V +
Sbjct: 510 DVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE-------SVGDL 562
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + +
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG---------PPGPPEDVKVEHISSTT 613
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S++ SW P P N+P + I R +Q+ T+ E N
Sbjct: 614 SQL------------SWRPGP--DNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYN 659
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N++G G S+ + + +P VAP + G + + + +
Sbjct: 660 ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVI 719
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT---------RNWALIVGLQ 460
TW I +N G G+ + + P T + R RN +++
Sbjct: 720 TWEAIPEELQN--GEGFGYIVMF----RPVGTTAWMKERVALVESSKFIYRNESIM---- 769
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++ +
Sbjct: 770 PLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWN 829
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY+V W D I GN +I L Y V A++ G G
Sbjct: 830 RNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTG 888
Query: 581 RMSSP 585
S P
Sbjct: 889 PSSPP 893
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + ++ + C P P W++ DG+ + G+ K ++ +L I ++D G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGSPMP--GKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGQRLNTEE-------RIQIENGTLIITMLNISDSGIYQCAAEN 390
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I G + G+L IS P + D GIY C ATN
Sbjct: 46 IILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGEL---SYAWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ D G L +D G Y C V + S V+GPP
Sbjct: 162 --SPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDS 55
EG V + C P P F W D + +R+ + GNL + V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKG--RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G +VL + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|397522457|ref|XP_003831283.1| PREDICTED: contactin-6 isoform 2 [Pan paniscus]
Length = 956
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 293/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 352 GGDIVIGCKPNAFPRAAISWKRGRETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 412 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 471 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 528 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 583 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 643 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 926
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 927 SRGIQFLEPSTHFLSIVIVIFYCF 950
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 225 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 326 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GRETLRQ 380
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 381 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 425
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLI-SPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ G+L I SP + D G+Y C ATN+ G S K +L + + + +++ +
Sbjct: 7 LDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E ++ + G L I +D G Y
Sbjct: 67 GVVLLCGP-PPHFGDLSYAWTFND---NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|117938277|ref|NP_032805.2| contactin-3 precursor [Mus musculus]
gi|408360027|sp|Q07409.2|CNTN3_MOUSE RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
AltName: Full=Plasmacytoma-associated neuronal
glycoprotein; Flags: Precursor
gi|146327723|gb|AAI41427.1| Contactin 3 [synthetic construct]
gi|148666969|gb|EDK99385.1| contactin 3 [Mus musculus]
Length = 1028
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R +G L I V++ D+G Y+CTA N
Sbjct: 424 GSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W +V + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+++A N++G GEPS PS + T P APS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ + A++ GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L I+ ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTITNLNVTDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ + + P K + + W + G+M + E
Sbjct: 398 SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFW-----KKGDMMVRE 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ DGG L+I N + ADAG Y C ++ GK + T ++V P
Sbjct: 453 QARVSFLNDGG-LKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEP 499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|426341233|ref|XP_004035953.1| PREDICTED: contactin-3 [Gorilla gorilla gorilla]
Length = 1028
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + +G L I+ V++ D+GIY+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGIYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGSGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGIYTCMAENQFGKANGTTHLVVTEP 499
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|363738791|ref|XP_425170.3| PREDICTED: contactin-6 [Gallus gallus]
Length = 1054
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 294/626 (46%), Gaps = 30/626 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG VTI C P A+P+ W+K ++ R + E+G+L + +++ D+G+Y+C ATN
Sbjct: 450 GGEVTIGCRPSASPRAAIDWRKGPEVLRLNKRALLLEDGSLRLYNITKSDAGVYTCIATN 509
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + G LIV + P + + ++ L C + + VA+ W+ +G +I
Sbjct: 510 QFGVARNSGNLIVKER-TVITIAPSNMDVTVGESIVLPCQVSHDPSIAVAFTWSFSGNQI 568
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D I G G L I N +G+Y C+V++T+ ST +IV GPPG
Sbjct: 569 ---DFKRGMPHFERIGGESVGDLMIRNIQLHHSGKYVCMVQTTLDSQSTAVDIIVRGPPG 625
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T+A + W G N P+ Y I RT ++ W VS +
Sbjct: 626 PPEDVRVEHISSTTAVLSWKSGKDNNSPVQIYSIQTRTPFSVGWQAVS-----TVPEVLN 680
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
GR + L PW YEF+V+A N +G GEPS PS T A P AP+ + GGGG
Sbjct: 681 GRTHKATVVDLSPWVEYEFRVVARNSVGTGEPSKPSALLKTKAAVPTVAPTNVSGGGGSR 740
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN Y I +R T + + V R S +
Sbjct: 741 SELVITWEPVPEELQNGEGFGYIIMFRPLGSTTWTKAAVAPI-EASKYVYRNESITPLSP 799
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S + +++ ED PQ+AP G + ++ + V+W P+ R
Sbjct: 800 FEVKVGVYNNEGEGTLSSISIVYAGEDEPQIAPAGTSALSISAAEVEVSWQPVAWNRHT- 858
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
GR++G+ + YW +D E TA I GL+ +T Y+ V AYN AG GP S
Sbjct: 859 -GRVLGYEVLYWTDDPKESTAGKVRVNGNVTAKNITGLKANTVYFATVRAYNTAGTGPSS 917
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P +PP+ + K N + + + W +V E ++GYK+ + +
Sbjct: 918 APVNVTTKKSPPSQPPANIAWKLTN-SKICLNWEHVKTMENESEVLGYKI----LYRQNR 972
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG- 600
+ I+ NT +V + Y + + S+GGDG S ++ + SG
Sbjct: 973 HSKAHILETNNTSAELLVPFE--EDYLIEIRTISDGGDGSSSE---EIRIPKISSLSSGG 1027
Query: 601 ---SP-ALYSASTTLLLVMSSTLYIF 622
SP LY+ ++ +LL+ Y F
Sbjct: 1028 IKLSPRELYTLASGILLLSFVLTYSF 1053
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGN---LLISPVSRDDSG 56
YA +G + + C P P W++ DGN + +KI + N L I V ++D G
Sbjct: 264 YAAKGSSAKLECFALGNPVPSISWRRSDGNSL----TKKIKHDKNKGVLEIPDVQQEDGG 319
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
Y C A N+ G + ++G+L V P + +++ ++ + +L C A + +Y
Sbjct: 320 SYECIAENIRGRNIARGQLFVYALPEWDKKIENAF-LSLYDSLFWECKAKGKP--TPSYS 376
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTV 174
W NG + + I ++ G L I + +D+G Y+CV ++ I S + V
Sbjct: 377 WLKNGQPL-------MSEERIQVENGTLIIPMLNMSDSGLYQCVAENKYDTIYASAELRV 429
Query: 175 IVEGP 179
I P
Sbjct: 430 IAAAP 434
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C + P P + W K+G + S R ++ ENG L+I ++ DSG+Y C A N + +
Sbjct: 365 CKAKGKPTPSYSWLKNGQPLMSEERIQV-ENGTLIIPMLNMSDSGLYQCVAENKYDTIYA 423
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + R SA +D W G + +
Sbjct: 424 SAELRVIAAAPDFSKNPVKKTSIVQVGGEVTIGCRPSASPRAAID----W-RKGPEVLRL 478
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ L ++ G L + N + +DAG Y C+ + G +IV+
Sbjct: 479 NKRALL-----LEDGSLRLYNITKSDAGVYTCIATNQFGVARNSGNLIVK 523
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C + P P + WK++G I + G+L I+ P + D G Y C ATN
Sbjct: 72 VLLNCTAKGYPLPSYRWKQNGTDIDLTMSYHYRLVGGSLAINNPRKKQDIGTYQCLATNS 131
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + ++ + +++ + + L C +++ WT N
Sbjct: 132 FGTILSRKAKLQFAYLENFEMKTRSTVSVREGQGVVLLCGPPPHH-GGLSFAWTFNN--- 187
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I D G Y CVV ++K V+GPP
Sbjct: 188 NTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYTCVV------TNSKAGRSVQGPP 237
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 72/193 (37%), Gaps = 26/193 (13%)
Query: 4 EGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYS 59
EG V + C P F W + N + R+ F E GNL I+ V D G Y+
Sbjct: 162 EGQGVVLLCGPPPHHGGLSFAWTFNNNTLYVQEDRRRFVSQETGNLYIAKVEPWDVGNYT 221
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G L + P + P A + +L C A
Sbjct: 222 CVVTNSKAGRSVQGPPTPLTLRSDGVMGEYEPKIEARFPETTYAAKGSSAKLECFALGNP 281
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDG--GLLEITNASFADAGEYECVVKSTVGK 167
+ ++ W + D N L T I D G+LEI + D G YEC+ ++ G+
Sbjct: 282 VPSIS--WRRS-------DGNSL-TKKIKHDKNKGVLEIPDVQQEDGGSYECIAENIRGR 331
Query: 168 ISTKTTVIVEGPP 180
+ + V P
Sbjct: 332 NIARGQLFVYALP 344
>gi|326928154|ref|XP_003210246.1| PREDICTED: contactin-3-like [Meleagris gallopavo]
Length = 941
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 296/618 (47%), Gaps = 20/618 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V C P+A+PK + WKK G + R + ++G L I+ V++ D+G Y+C ATN
Sbjct: 337 GSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATN 396
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + + ++ L C + +LD+++ W NG
Sbjct: 397 QFGTASGTTNLVVTE-PTRITLAPSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLT 455
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+VK+ V +++ +IV G PG P
Sbjct: 456 DFKKDASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPP 514
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A I W +G N P+T Y + ART ++ W V+ D G
Sbjct: 515 EHVRVDEITDTTAQISWQEGTDNHSPVTAYTVQARTPFSVGWQRVT-----TVPDVIDGN 569
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P P+ + GGGG +
Sbjct: 570 TFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSE 629
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 630 LVITWDPIPEELQNGEGFGYVVAFRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYE 688
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP GV +S+ I V+W I + G
Sbjct: 689 VKVGVYNNKGEGPFSSVTTVFSAEEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSS--G 746
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + I GL+ + YY V AYN+AG GP S
Sbjct: 747 RLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYTAVRAYNSAGAGPFSAT 806
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + + + V + W V E + GYKV + + S+
Sbjct: 807 VNATTKKTPPSQPPGNV-VWNVTDSRVILNWEEVRAMENESEVTGYKV----LYRTSSQN 861
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 603
N ++ T ++ + + Y + V A + GGDG S + ++ SG
Sbjct: 862 NMNVLNTDKTTAELLLQFN--EDYIIEVKATTEGGDGTSSDQILIPRLASMDARGSGPST 919
Query: 604 L--YSASTTLLLVMSSTL 619
L +S S+ L V S TL
Sbjct: 920 LNIFSLSSILPTVFSFTL 937
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + GR ++ ENG L IS ++ DSG Y C A N HG+ S
Sbjct: 252 CRASGKPKPSYRWLKNGDQLSVEGRIQV-ENGALTISNLNLTDSGRYQCVAENKHGVIYS 310
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K I + + C ++ + G L
Sbjct: 311 SAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSW-------KKGGEQL 363
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+E E + DGG L ITN + DAG Y CV + G S T ++V P
Sbjct: 364 HENERITLLKDGG-LRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEP 412
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 152 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 211
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G + ++GRL P ++ Q+ IA L C A + +Y W NG
Sbjct: 212 TENSRGKNIARGRLTYYAKP-HWIQMIKDTEIAVEDTLYWDCRASGKP--KPSYRWLKNG 268
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
D +E I ++ G L I+N + D+G Y+CV ++ G I S + V+ P
Sbjct: 269 ------DQLSVEG-RIQVENGALTISNLNLTDSGRYQCVAENKHGVIYSSAELRVVASAP 321
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 24/225 (10%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P A + F W + + + RR + E G+L I+ V D G Y+
Sbjct: 49 EGQGVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYT 108
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + ++ G P Q P + A ++L C A
Sbjct: 109 CVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 168
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + T + L + G++EI N DAG YEC+ +++ GK
Sbjct: 169 VPQINWRRTDGMPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECITENSRGKNI 220
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P ++ E+ T+ W D +G+P Y+
Sbjct: 221 ARGRLTYYAKPHWIQMIKDTEI-AVEDTLYW-DCRASGKPKPSYR 263
>gi|326668796|ref|XP_684096.5| PREDICTED: contactin-3-like [Danio rerio]
Length = 1026
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 191/598 (31%), Positives = 288/598 (48%), Gaps = 34/598 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G +V++ C P A+P+ +WK+ I+ R +F NG L I+ +++ D G Y+C
Sbjct: 424 ARSGSDVSLDCRPHASPRAISLWKRGTEILQRNERTFLFPNGTLKITNITKRDGGSYTCV 483
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G+LI+ P+ Q P I ++ L C + LDVA+ W NG
Sbjct: 484 AKNQFGTASTTGKLIITE-PTRISQSPSSTEITVGESVVLPCQVTADPALDVAFSWAFNG 542
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + D + E + G L+ I N G+Y C+V + V +S ++V+GPP
Sbjct: 543 QPIDFHQDADHFERVGGSFSGDLM-IRNIQLNHGGKYVCLVDTDVESLSADAILVVKGPP 601
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P V V EV ++A + W+ G NG PIT Y I RT + W + +
Sbjct: 602 SPPDMVVVEEVTDSTAQLSWSPGQDNGSPITGYAIQGRTPFTVGW-----QAVDTVPEVI 656
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + L W YEF+V+A N +G GEPS PS + T P AP+ +GGGGG
Sbjct: 657 NGNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGT 716
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF-----QSETLKEYGNVGIAVVRIPS 355
+L I+WEP+P E QN Y I +R + + +L Y V R +
Sbjct: 717 KSELVITWEPVPEELQNGEGFGYIIAFRPVGMVTWTRVVISAPSLTRY------VFRNDT 770
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
++ + VKV A N+ G GP S + T+FSAE++P +AP+ V ++ ++ I VTW PI
Sbjct: 771 IPPFSPFNVKVGAFNNRGEGPFSTIATVFSAEEVPSIAPEKVSAKSLSAADIEVTWEPIA 830
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYN 473
I E R++G+ + YW++D +T R T N+ + GLQ +T+YY+ V A+N
Sbjct: 831 SIPE----RVLGYEVVYWEDDTKPDTVGKV--RITGNYTAVNVSGLQGNTQYYLAVCAFN 884
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
AG GP+S T + P +PP V I + + W V E + GY V
Sbjct: 885 TAGTGPQSAPVNITTKKPPPGQPPQNVEWNLIGSQLI-LQWDPVIALETESEVTGYIVLY 943
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
R ND + N A++ L+P Y +++ + S GG G S P Q+
Sbjct: 944 -----RRHRNNDMYSIITNKTSAELT-LNPNDNYVIQIKSLSEGGLGEGSEPIHIHQL 995
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 154/599 (25%), Positives = 234/599 (39%), Gaps = 71/599 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + S GR +I ENG L I ++ D G+Y C A N HG+ S
Sbjct: 342 CKANGKPKPSYSWLKNGESLISEGRVQI-ENGALSIFSLNLSDGGMYQCVAENKHGIIYS 400
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAH--RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L+VL + Q P T+ A ++ L C H +W G I +
Sbjct: 401 SAELMVLASAPSFSQNPLSQTLKARSGSDVSLDCRPHASP--RAISLWKR-GTEILQRNE 457
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
PN G L+ITN + D G Y CV K+ G ST +I+ P + P
Sbjct: 458 RTFLFPN-----GTLKITNITKRDGGSYTCVAKNQFGTASTTGKLIITEPTRISQSPSST 512
Query: 187 QVVEVHKTSATIQWTDG---------ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
++ Q T A NG+PI ++ ++ + S ++ + +
Sbjct: 513 EITVGESVVLPCQVTADPALDVAFSWAFNGQPIDFHQ--DADHFERVGGSFSGDLMIRNI 570
Query: 238 DRYTGRKEASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
G K + + V S V+ G PSP ++ + ++
Sbjct: 571 QLNHGGKYVCLVDTDVESLSADAILVVKG---------PPSPPDMVVVEEVTDSTAQ--- 618
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPS 355
+SW P + +P Y I R +Q+ +T+ E N +
Sbjct: 619 ---------LSWS--PGQDNGSPITGYAIQGRTPFTVGWQAVDTVPEVINGNTLTATVVG 667
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAED-MPQVAPQGVFSRGFNSTAINVTWNPI 414
+ EYE +V A N VG G S T ED MP AP V G + + +TW P+
Sbjct: 668 LNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGTKSELVITWEPV 727
Query: 415 --ELIRENIRGRLIGHR---IKYWKE---DNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
EL G +I R + W P T + + T + P + +
Sbjct: 728 PEELQNGEGFGYIIAFRPVGMVTWTRVVISAPSLTRYVFRNDT---------IPPFSPFN 778
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
VKV A+NN GEGP S + + P P V K ++ + VTW ++ E +
Sbjct: 779 VKVGAFNNRGEGPFSTIATVFSAEEVPSIAPEKVSAKSLSAADIEVTWEPIASIPER--V 836
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+GY+V WE D I GN ++ L +Y++ V AF+ G G S+P
Sbjct: 837 LGYEVVYWEDDTKPDTVGKVRI-TGNYTAVNVSGLQGNTQYYLAVCAFNTAGTGPQSAP 894
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGG-RRKIFENGNLLISPVSRD-DSGIYSCTATNVHG-M 68
C AP P++ W +G +I GG R+ GNL+I+ + RD DSG+Y CTA N G +
Sbjct: 53 CEASGAPSPQYRWSLNGTLIDLGGDERRRLSGGNLIITGLDRDQDSGVYQCTAFNTRGTI 112
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV-RIG 125
+ L + ++ Q + + + + L C H+ EL + W N
Sbjct: 113 LSQRATLQFAYLENFKTQTRSAVNVREGQGVVLLCGTPLHSGEL---TFTWVFNEYPHFV 169
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
D ++ + G L I +D G Y CVV +T+ K
Sbjct: 170 QQDSRRF----VSQETGNLYIAKVEPSDVGNYTCVVNNTITK 207
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G + + C P P+ W++ ++ + N L I ++D+G Y C
Sbjct: 242 AAKGSALKLECFALGNPVPRISWRRTSDVSFPNKVKLKNSNAILEIPSFQQEDTGTYECI 301
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GR + H ++ Q ++ NL C A+ + +Y W NG
Sbjct: 302 AENSRGKNAARGR-VSFHATPHWLQTMTDTAMSIEENLFWECKANGKP--KPSYSWLKNG 358
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ + + I+ G L I + + +D G Y+CV ++ G I + ++V
Sbjct: 359 ESL-------ISEGRVQIENGALSIFSLNLSDGGMYQCVAENKHGIIYSSAELMV 406
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 24/192 (12%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + + F W + + + RR + E GNL I+ V D G Y+
Sbjct: 139 EGQGVVLLCGTPLHSGELTFTWVFNEYPHFVQQDSRRFVSQETGNLYIAKVEPSDVGNYT 198
Query: 60 CTATNVHGMDE--SKGRLIVLHGPSYYEQLPPKI------TIAAHRN--LQLRCSAHTEE 109
C N + S +VL + PKI TI A + L+L C A
Sbjct: 199 CVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFPDTIPAAKGSALKLECFALGNP 258
Query: 110 LLDVAYIWTHNGVRIGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ +++ R ++ N+++ N N +LEI + D G YEC+ +++ GK
Sbjct: 259 VPRISW------RRTSDVSFPNKVKLKNSN---AILEIPSFQQEDTGTYECIAENSRGKN 309
Query: 169 STKTTVIVEGPP 180
+ + V P
Sbjct: 310 AARGRVSFHATP 321
>gi|16758574|ref|NP_446198.1| contactin-5 precursor [Rattus norvegicus]
gi|55976161|sp|P97527.1|CNTN5_RAT RecName: Full=Contactin-5; AltName: Full=Neural recognition molecule
NB-2; Flags: Precursor
gi|1752643|dbj|BAA13311.1| NB-2 [Rattus norvegicus]
gi|149020699|gb|EDL78504.1| rCG31728 [Rattus norvegicus]
Length = 1099
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 287/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + R I +G+L I S+ D G Y C N+ G
Sbjct: 499 VLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDFE 617
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 618 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 677
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 678 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 732
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + GG G+ +L I
Sbjct: 733 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVI 792
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + + R S T +EVKV
Sbjct: 793 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 851
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 852 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 907
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++A +R ++ ++ GL+ DT Y++ V AYN AG GP S
Sbjct: 908 GFEIGYWKDTEPEDSAETVRTRGNESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREVSA 967
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P +PP + + + V + W V P E ++GYKV + + +T
Sbjct: 968 TTKRHPPSEPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIET 1026
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 1027 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYAGGKITSAQSTLHS 1079
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 1080 LSKWSSVTLLLAL 1092
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQIYTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 428 APL-------LPQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 480
Query: 181 GL 182
Sbjct: 481 SF 482
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 411 CKATGKPRPTYRWLKNGAPLLPQSRVDT-ANGVLAIHSVNQSDAGMYQCLAENKYGAIYA 469
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ VR GN +
Sbjct: 470 SAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVR-GNKRI 528
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L P+ G L I NAS AD G+Y C + G +V V+ P
Sbjct: 529 AIL--PD-----GSLRILNASKADEGKYICQGVNIFGSAEIIASVSVKEP 571
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 119 VALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 275
>gi|7657361|ref|NP_055276.1| contactin-6 precursor [Homo sapiens]
gi|55976622|sp|Q9UQ52.1|CNTN6_HUMAN RecName: Full=Contactin-6; AltName: Full=Neural recognition
molecule NB-3; Short=hNB-3; Flags: Precursor
gi|5631291|dbj|BAA82612.1| neural adhesion molecule NB-3 [Homo sapiens]
gi|86577727|gb|AAI13119.1| Contactin 6 [Homo sapiens]
gi|119584275|gb|EAW63871.1| contactin 6, isoform CRA_a [Homo sapiens]
gi|119584276|gb|EAW63872.1| contactin 6, isoform CRA_a [Homo sapiens]
Length = 1028
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G SE + + +P VAP + G + + + +TW I
Sbjct: 668 WVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEE 727
Query: 418 RENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+N G G+ I + W ++ + ++V RN ++I P + + VKV
Sbjct: 728 LQN--GEGFGYIIMFRPVGSTTWSKE--KVSSVESSRFVYRNESII----PLSPFEVKVG 779
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEG S + + PQ P ++ + + + V+W ++ + ++GY+
Sbjct: 780 VYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNTGRVLGYE 839
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
V W D S + GN +I L Y V A++ G G S P
Sbjct: 840 VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPV 894
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTHLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 46 VILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|395824571|ref|XP_003785536.1| PREDICTED: contactin-6 [Otolemur garnettii]
Length = 1029
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 301/626 (48%), Gaps = 35/626 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GGN+ I C P A P+ WK+ + R + E+G+L I V+R D G Y+C ATN
Sbjct: 424 GGNIVIECKPNAFPRAAISWKRGAENLRQSRRVFLLEDGSLKIYNVTRSDGGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LIV + P ++ + ++ L C + ++V ++W+ NG I
Sbjct: 484 QFGIAKNTGSLIVKER-TVITVPPSRMDVTVGESIVLPCQVSHDPTIEVIFVWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + + +
Sbjct: 600 PPEDVKVDHISSTTSQLSWRPGPNNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILS 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYVVMFRPVGSTTWNKEKVASVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+ + + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGALSTVSIVYSGEDEPQLAPRKISVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW +D E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWTDD-ARESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQ-- 944
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
+R + T I N A++ L P + Y + + S+GGDG S ++ +
Sbjct: 945 ---NRHSKTHILETNNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRIPKMSS 996
Query: 597 FKSGSPALYSASTTLLLVMSSTLYIF 622
S + AST L ++ Y F
Sbjct: 997 LSSRGIHVLEASTYFLSIVIMVFYCF 1022
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 134/602 (22%), Positives = 230/602 (38%), Gaps = 73/602 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P ++W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYMWFKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + N+ + C + A W G +L
Sbjct: 398 NAELRVLASAPDFSKTPIKKNSVVQVGGNIVIECKPNA--FPRAAISWKR-----GAENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG-- 181
+ + ++ G L+I N + +D G Y C+ + G + K ++ PP
Sbjct: 451 RQSRRVFL-LEDGSLKIYNVTRSDGGSYTCIATNQFGIAKNTGSLIVKERTVITVPPSRM 509
Query: 182 ---------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVS 229
LP QV W+ D + + H++ I +V
Sbjct: 510 DVTVGESIVLP--CQVSHDPTIEVIFVWSFNGDVIDLKKGVAHFERIGGE-------SVG 560
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+ +I ++G+ +++ L S ++ G P P + D
Sbjct: 561 DLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRG---------PPGPPEDVKVDHISS 611
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGI 348
S+ +SW P P N+P + I R +Q+ T+ E +
Sbjct: 612 TTSQ------------LSWRPGP--NNNSPIQIFTIQTRTPFSVGWQAVATVPEILSGKT 657
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAI 407
+ + EYE +V A N +G G S+ + + +P VAP + G + + +
Sbjct: 658 YNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSRSEL 717
Query: 408 NVTWN--PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-RNWALIVGLQPDTK 464
+TW P EL G ++ R N E+ A SR RN ++I P +
Sbjct: 718 VITWESIPEELQNGEGFGYVVMFRPVGSTTWNKEKVASVESSRFVYRNESII----PLSP 773
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
+ VKV YNN GEG S + + PQ P + ++ + + + V+W ++ +
Sbjct: 774 FEVKVGVYNNEGEGALSTVSIVYSGEDEPQLAPRKISVQSFSASEMEVSWNAIAWNRNTG 833
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++GY+V W D S + GN +I L Y V A++ G G S
Sbjct: 834 RVLGYEVLYWTDDARESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSP 892
Query: 585 PA 586
P
Sbjct: 893 PV 894
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y+W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLLWECKASGKP--NPWYMWFK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NG R LN E I I+ G L IT + +D+G Y+C ++ I + ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAENKYQIIYANAELRVLAS 406
Query: 179 PPGLP------------GGVQVVEVHKTS---ATIQWTDGATNGR 208
P GG V+E + A I W GA N R
Sbjct: 407 APDFSKTPIKKNSVVQVGGNIVIECKPNAFPRAAISWKRGAENLR 451
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I S + G+L+IS P + D G Y C ATN+
Sbjct: 46 IILNCAANGYPSPHYRWKQNGTDIDFSMSYHYRLDGGSLVISSPHTDQDIGTYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTVLSRKAKLQFAYIDDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLHVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 55
EG V + C P P F W + N + + F E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLHVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRADGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|345786348|ref|XP_533761.3| PREDICTED: contactin-3 [Canis lupus familiaris]
Length = 1015
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 284/580 (48%), Gaps = 19/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+PKP WKK I+ R ++G L I+ V++ D+G Y+C A N
Sbjct: 412 GSMVSLDCKPRASPKPVCSWKKGDMIVQENERISFLKDGGLKIANVTKADAGTYTCIAEN 471
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 472 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 530
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 531 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 589
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 590 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 644
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 645 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 704
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 705 LVITWDPVPEELQNGGGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYE 763
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 764 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSRVSANSLSSSEIEVSWNTIPWKLSN--G 821
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW + EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 822 HLLGYEVRYWN-NGEEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTT 880
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 881 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAKENESEVTGYKVFYRTSSQNNVQV 939
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 940 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 973
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 327 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYS 385
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G+M +
Sbjct: 386 SAELKVVASAPDFSKAPMKKLMQVQVGSMVSLDCKPRASPKPVCSW-------KKGDMIV 438
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E + DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 439 QENERISFLKDGG-LKIANVTKADAGTYTCIAENQFGKANGTTRLVVTEP 487
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 227 AAKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDTGSYEC 285
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 286 IAENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKN 342
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G I S + V+
Sbjct: 343 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 395
Query: 179 P 179
P
Sbjct: 396 P 396
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R + GNL++ +R+ D+G Y C
Sbjct: 30 EDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLDGGNLVVINPNRNWDTGNYQCF 89
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 90 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 146
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
N + E ++ + G L I +D G Y CVV STV K
Sbjct: 147 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTK 192
>gi|402859564|ref|XP_003894224.1| PREDICTED: contactin-6 [Papio anubis]
Length = 1045
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 440 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATN 499
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 500 QFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII 558
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 559 ---DLKKGIAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 615
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T++ + W G N PI + I RT ++ W + +
Sbjct: 616 PPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 670
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 671 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGSR 730
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + V R S +
Sbjct: 731 SELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSP 789
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 790 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 848
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 849 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 904
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 905 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 963
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 964 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 1002
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 255 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 312
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL +C A + + Y W
Sbjct: 313 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLK 369
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I ID G L IT + +D+G Y+C ++
Sbjct: 370 NGER-----LNPEE--RIQIDNGTLIITMLNVSDSGVYQCAAEN 406
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP + G + + + +TW P E
Sbjct: 684 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNINGGGGSRSELVITWESIPEE 743
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-RNWALIVGLQPDTKYYVKVMAYNN 474
L G ++ R E+ A SR RN ++I P + + VKV YNN
Sbjct: 744 LQNGEGFGYIVMFRPVGSTTWTKEKVASVESSRFVYRNESII----PLSPFEVKVGVYNN 799
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
GEG S + + PQ P ++ + + + V+W ++ + ++GY+V W
Sbjct: 800 EGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 859
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
D S + GN +I L Y V A++ G G S P
Sbjct: 860 TDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPP 909
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I +NG L+I+ ++ DSG+Y C A N + + +
Sbjct: 355 CKASGKPNPWYTWLKNGERLNPEERIQI-DNGTLIITMLNVSDSGVYQCAAENKYQIIYA 413
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 414 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 468
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 469 SKRMFL-LEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK 513
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 62 VILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 121
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 122 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 177
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 178 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 227
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 152 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 207
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 208 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 267
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 268 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 319
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 320 GRNLAKGQLIFYAPP 334
>gi|354467484|ref|XP_003496199.1| PREDICTED: contactin-5-like [Cricetulus griseus]
Length = 1089
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 196/613 (31%), Positives = 288/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ APKP W+K + S R I +G+L I S+ D G Y C N+ G
Sbjct: 489 VLIECQPQGAPKPAISWRKGDKAVRSNKRIAILPDGSLRILNASKADEGKYICQGVNIFG 548
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 549 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDSSLDVTFYWTLKGQPIDFE 607
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 608 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 667
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W ++ + TG E+
Sbjct: 668 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QIVKTVPEVITGDMES 722
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 723 AMAVDLNPWVEYEFRVVASNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 782
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 783 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 841
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I VTW + +E++ GR
Sbjct: 842 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKAMSVSVSEILVTW---KHNKESL-GRPQ 897
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++A +R ++ ++ GL+ DT Y++ V AYN AG GP S
Sbjct: 898 GFEIGYWKDMEPEDSAETVRTRGNESFVMVTGLEGDTLYHLTVRAYNGAGYGPLSRIVSA 957
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R+ P +PP + + + V + W V P E ++GYKV + + +T
Sbjct: 958 TTKRRPPSEPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIET 1016
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 1017 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 1069
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 1070 LSKWSSVTLLLAL 1082
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I + DD+G+Y CT
Sbjct: 302 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNLQLDDAGLYECT 360
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 361 AENSRGRNSFRGQLQIYTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--KPTYRWLKNG 417
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
I L ++ G+L I + + +DAG Y+C+ ++ G I + ++ PP
Sbjct: 418 API-------LPQSRVDTVNGILAIHSVNQSDAGMYQCLAENKYGAIYASAELKVLASPP 470
Query: 181 GL 182
Sbjct: 471 SF 472
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G I R NG L I V++ D+G+Y C A N +G +
Sbjct: 401 CKATGKPKPTYRWLKNGAPILPQSRVDTV-NGILAIHSVNQSDAGMYQCLAENKYGAIYA 459
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P +E Q+ I + R + + C +++ R G+ +
Sbjct: 460 SAELKVLASPPSFELNQVKKTIIVTKDREVLIECQPQGAPKPAISW-------RKGDKAV 512
Query: 130 NELETPNINIDGGLLEITNASFADAGEYEC 159
+ I DG L I NAS AD G+Y C
Sbjct: 513 RSNKRIAILPDGS-LRILNASKADEGKYIC 541
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
NV + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 108 NVALNCEVRGNPTPTYRWLRNGTEIDLESDYRYSLIDGTFIISNPNEVRDSGLYQCLATN 167
Query: 65 VHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNG 121
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 168 TFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNE 224
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 225 F---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 265
>gi|148666976|gb|EDK99392.1| contactin 6, isoform CRA_b [Mus musculus]
Length = 1033
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 296/625 (47%), Gaps = 34/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 429 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 488
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G L+V + P K+ + ++ L C + ++V ++W NG I
Sbjct: 489 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 547
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 548 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 604
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 605 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 659
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 660 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 719
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 720 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 778
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 779 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 837
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 838 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 892
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 893 GPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 951
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S +M
Sbjct: 952 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSS---- 1001
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S + S +T L M Y F
Sbjct: 1002 LSSTGVQISKPSTQSLSMVGVFYCF 1026
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 134/603 (22%), Positives = 234/603 (38%), Gaps = 77/603 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 344 CKASGNPNPSYTWLKNGQRLNTEERIQI-ENGTLIITMLNISDSGIYQCAAENKYQTIYA 402
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 403 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 455
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVV-------KSTVGKISTKTTVIVEGPPGL 182
+ + + ++ G L+I N + ADAG Y CV KS+ G + + T+I P +
Sbjct: 456 KQSKRV-LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKM 514
Query: 183 PGGV--------QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
V QV W D + + H++ I +V +
Sbjct: 515 DVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE-------SVGDL 567
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + +
Sbjct: 568 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG---------PPGPPEDVKVEHISSTT 618
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S++ SW P P N+P + I R +Q+ T+ E N
Sbjct: 619 SQL------------SWRPGP--DNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYN 664
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N++G G S+ + + +P VAP + G + + + +
Sbjct: 665 ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVI 724
Query: 410 TWNPIELIRENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
TW I +N G G+ + + W + E A+ S+ I+ L P
Sbjct: 725 TWEAIPEELQN--GEGFGYIVMFRPVGTTAWMK---ERVALVESSKFIYRNESIMPLSP- 778
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ VKV YNN GEG S + + PQ P ++ + + + V+W ++ +
Sbjct: 779 --FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRN 836
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
++GY+V W D I GN +I L Y V A++ G G
Sbjct: 837 TGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPS 895
Query: 583 SSP 585
S P
Sbjct: 896 SPP 898
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + ++ + C P P W++ DG+ + G+ K ++ +L I ++D G Y
Sbjct: 244 AAKDSSIKLECFALGNPVPDISWRRLDGSPMP--GKIKYSKSQAILEIPKFQQEDEGFYE 301
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W
Sbjct: 302 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLK 358
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 359 NGQRLNTEE-------RIQIENGTLIITMLNISDSGIYQCAAEN 395
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I G + G+L IS P + D GIY C ATN
Sbjct: 51 IILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 110
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 111 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGEL---SYAWTFND- 166
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ D G L +D G Y C V + S V+GPP
Sbjct: 167 --SPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 216
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDS 55
EG V + C P P F W D + +R+ + GNL + V D
Sbjct: 141 EGQGVVLLC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDV 196
Query: 56 GIYSCTATNVHGMDESKG--RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G +VL + P + P I A +++L C A
Sbjct: 197 GNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 256
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 257 LGNPVPDISWRRLDGSPMPGKIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLR 308
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 309 GRNLAKGQLIFYAPP 323
>gi|45382937|ref|NP_989943.1| contactin-5 precursor [Gallus gallus]
gi|55976559|sp|Q90W79.1|CNTN5_CHICK RecName: Full=Contactin-5; AltName: Full=F11 axonin-1-related
protein 2; Short=FAR-2; Flags: Precursor
gi|15216160|emb|CAC51431.1| FAR-2 protein [Gallus gallus]
Length = 1027
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 283/586 (48%), Gaps = 22/586 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+A+PKP WKK + R I G+L I S+ D G YSC
Sbjct: 422 KGQEVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNASKSDEGRYSCRGV 481
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P KI + ++ L C A + LDV + WT NG
Sbjct: 482 NVFGSAEIVASVSVKE-PTRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQP 540
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + + E+ L I N AG Y C V++ +S +T ++V GPPG
Sbjct: 541 IDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGP 600
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ T+AT+ W+ GA N PI+ Y + AR+ ++ W + D +G
Sbjct: 601 PGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDVISG 655
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N++G G+PS+PS T P P+ + G G+
Sbjct: 656 DMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRH 715
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 716 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 774
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 775 EVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW---KHIKESL- 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G I YWK+ EE A + + L+ GL+ +T Y++ V AYN AG GP S
Sbjct: 831 GRPQGFEIGYWKDMEQEEAAEKVKTAGNESSLLLTGLEGNTLYHLTVRAYNAAGYGPPST 890
Query: 483 RYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + PS V I+ + + V + W V P E ++GYKV + + Q
Sbjct: 891 AVRVATKKSPPSQAPSNVMWIQ--DGSHVSLGWEPVRPLANESEVMGYKVLLRQEGQ--- 945
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+N +I T + +V L Y + V A S GGDG +SP I
Sbjct: 946 -SNSQVIETQKT--SAVVILPDVGVYIIEVCAVSEGGDG-TASPQI 987
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P WKK +G+ RK L I V +D+G+Y C
Sbjct: 239 AARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRK--SQAVLEIPNVQLEDAGMYEC 296
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L V P + E+L + + L+ C A + Y W N
Sbjct: 297 KAENSRGRNVFRGQLQVYTYPQWVEKL-NDTELDSGEQLRWECKATGKP--RPTYRWLKN 353
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
GV + I + +L I + +DAG Y+C+ ++ G I + I+
Sbjct: 354 GVPLWPQS-------RIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASA 406
Query: 180 PGLP 183
P P
Sbjct: 407 PTFP 410
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V++ C +P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 42 EEKKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCL 101
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 102 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 159 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 202
>gi|148666975|gb|EDK99391.1| contactin 6, isoform CRA_a [Mus musculus]
Length = 1028
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 297/625 (47%), Gaps = 34/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G L+V + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K ++ + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWK-LSNSKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S +M
Sbjct: 947 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSS---- 996
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S + S +T L M Y F
Sbjct: 997 LSSTGVQISKPSTQSLSMVGVFYCF 1021
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 133/605 (21%), Positives = 234/605 (38%), Gaps = 81/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQI-ENGTLIITMLNISDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVV-------KSTVGKISTKTTVIVEGPPGL 182
+ + + ++ G L+I N + ADAG Y CV KS+ G + + T+I P +
Sbjct: 451 KQSKRV-LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKM 509
Query: 183 PGGV--------QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
V QV W D + + H++ I +V +
Sbjct: 510 DVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE-------SVGDL 562
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + +
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG---------PPGPPEDVKVEHISSTT 613
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S++ SW P P N+P + I R +Q+ T+ E N
Sbjct: 614 SQL------------SWRPGP--DNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYN 659
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N++G G S+ + + +P VAP + G + + + +
Sbjct: 660 ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVI 719
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT---------RNWALIVGLQ 460
TW I +N G G+ + + P T + R RN +++
Sbjct: 720 TWEAIPEELQN--GEGFGYIVMF----RPVGTTAWMKERVALVESSKFIYRNESIM---- 769
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++ +
Sbjct: 770 PLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWN 829
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY+V W D I GN +I L Y V A++ G G
Sbjct: 830 RNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTG 888
Query: 581 RMSSP 585
S P
Sbjct: 889 PSSPP 893
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + ++ + C P P W++ DG+ + G+ K ++ +L I ++D G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGSPMP--GKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGQRLNTEE-------RIQIENGTLIITMLNISDSGIYQCAAEN 390
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I G + G+L IS P + D GIY C ATN
Sbjct: 46 IILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGEL---SYAWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ D G L +D G Y C V + S V+GPP
Sbjct: 162 --SPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDS 55
EG V + C P P F W D + +R+ + GNL + V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKG--RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G +VL + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|197097634|ref|NP_001124558.1| contactin-6 precursor [Pongo abelii]
gi|55731108|emb|CAH92269.1| hypothetical protein [Pongo abelii]
gi|55731947|emb|CAH92682.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 295/625 (47%), Gaps = 33/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTTKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV PPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRAPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+ +T N A++ L P + Y + + S+GGDG S ++ +
Sbjct: 948 SKTHVLET-----NNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRIPKMSSL 997
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S L ST L ++ Y F
Sbjct: 998 SSRGIQLLEPSTHFLSIVIVIFYCF 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTTKNTGSLIVK 497
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 46 VILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|355559498|gb|EHH16226.1| hypothetical protein EGK_11479 [Macaca mulatta]
Length = 1028
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHARISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNL-LISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL +I+P D+G Y C
Sbjct: 42 EDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLV 202
>gi|296225710|ref|XP_002758613.1| PREDICTED: contactin-6 [Callithrix jacchus]
Length = 1029
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 192/624 (30%), Positives = 293/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R +G Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNVTRSHAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFMWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEDISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSALLRTKASVPVVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIVMFRPVGLTAWTKEKVASVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV ND G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNDEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSR---TTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNITTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 998
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S + ST L ++ T Y F
Sbjct: 999 SRGIQVLEPSTHFLSIVIVTFYSF 1022
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + +L C A+ + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLLWECKANGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKANGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + + AG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNVTRSHAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I + E G+L IS P + D G+Y C ATN+
Sbjct: 46 IILNCAANGHPSPHYRWKQNGTDIDFTMSYHYRLEGGSLAISSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKG----------RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G I+ + + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGKIMSYXXKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|410951589|ref|XP_003982477.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6-like [Felis catus]
Length = 1028
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 286/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+CTATN
Sbjct: 424 GGDITIECKPAAFPRAAISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCTATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L+V + P K+ + ++ L C + ++V +IW+ NG I
Sbjct: 484 QFGIAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVIFIWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G+ N PI + + ART ++ W + +
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTTWTKERVPSVESSRF-VYRNESITPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGAG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DGN + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETP--NINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ TP I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGERL---------TPEERIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 13/175 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLTPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K T + A W G L +
Sbjct: 398 NAELRVLASAPDFSKNPLKKTSVVQVGGDITIECKPAAFPRAAISWKR-----GMESLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
+ ++ DG L+I N + +DAG Y C + G + K ++ PP
Sbjct: 453 SKRVFLSEDGS-LKIYNVTRSDAGSYTCTATNQFGIAKNTGSLVVKERTVITIPP 506
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I + + GNL IS P + D G+Y C ATN
Sbjct: 46 IILNCAATGYPSPSYRWKQNGTDIDFTMSYHYRLDEGNLAISSPRTDQDIGMYQCLATNT 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C V + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|109035942|ref|XP_001101862.1| PREDICTED: contactin-3-like [Macaca mulatta]
Length = 1028
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L I+ +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTITNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHARISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L ITN S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I + + NG ++I+P D+G Y C
Sbjct: 42 EDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLV 202
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------NGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|114585170|ref|XP_516244.2| PREDICTED: contactin-6 isoform 2 [Pan troglodytes]
Length = 1028
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 292/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 998
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 999 SRGIQCLEPSTHFLSIVIVIFYCF 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRVFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P++ WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 46 VVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|109035936|ref|XP_001101588.1| PREDICTED: contactin-6 isoform 1 [Macaca mulatta]
Length = 1024
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 419 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATN 478
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 479 QFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII 537
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 538 ---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 594
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T++ + W G N PI + I +T ++ W + +
Sbjct: 595 PPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILN 649
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP + GGGG
Sbjct: 650 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSR 709
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 710 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSP 768
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 769 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 827
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 828 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 883
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 884 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 942
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 943 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 981
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 19/236 (8%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G S+ + + +P VAP V G + + + +TW I
Sbjct: 663 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEE 722
Query: 418 RENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTT-RNWALIVGLQPDTKYYVKV 469
+N G G+ I + W + E+ A SR RN ++I P + + VKV
Sbjct: 723 LQN--GEGFGYIIMFRPVGSTTWTK---EKVASVESSRFVYRNESII----PLSPFEVKV 773
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YNN GEG S + + PQ P ++ + + + V+W ++ + ++GY
Sbjct: 774 GVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGY 833
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+V W D S + GN +I L Y V A++ G G S P
Sbjct: 834 EVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPP 888
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 234 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 291
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL +C A + + Y W
Sbjct: 292 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLK 348
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 349 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 385
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 334 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 392
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 393 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 447
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 448 SKRMFL-LEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK 492
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 41 VILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 100
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 101 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 156
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 157 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 206
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 131 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 186
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 187 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 246
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 247 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 298
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 299 GRNLAKGQLIFYAPP 313
>gi|332815947|ref|XP_001137194.2| PREDICTED: contactin-6 isoform 1 [Pan troglodytes]
Length = 956
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 292/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 352 GGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 412 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 471 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 528 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 583 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 643 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 926
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 927 SRGIQCLEPSTHFLSIVIVIFYCF 950
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 225 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 326 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR-----GTETLRQ 380
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 381 SKRVFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 425
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLI-SPVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ G+L I SP + D G+Y C ATN+ G S K +L + + + +++ +
Sbjct: 7 LDGGSLAINSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E ++ + G L I +D G Y
Sbjct: 67 GVVLLCGP-PPHFGDLSYAWTFND---NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|297285390|ref|XP_002802773.1| PREDICTED: contactin-6 [Macaca mulatta]
Length = 957
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 352 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 412 QFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 471 ---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T++ + W G N PI + I +T ++ W + +
Sbjct: 528 PPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP + GGGG
Sbjct: 583 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 643 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 914
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 9/231 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP V G + + + +TW P E
Sbjct: 596 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEE 655
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-RNWALIVGLQPDTKYYVKVMAYNN 474
L G +I R E+ A SR RN ++I P + + VKV YNN
Sbjct: 656 LQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRFVYRNESII----PLSPFEVKVGVYNN 711
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
GEG S + + PQ P ++ + + + V+W ++ + ++GY+V W
Sbjct: 712 EGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 771
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
D S + GN +I L Y V A++ G G S P
Sbjct: 772 TDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPP 821
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL +C A + + Y W
Sbjct: 225 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 326 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 380
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 381 SKRMFL-LEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK 425
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLIS-PVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ G+L IS P + D G+Y C ATN+ G S K +L + + + +++ +
Sbjct: 7 LDGGSLAISSPHTDQDIGMYQCLATNLLGTILSRKAKLQFAYIEDFETKTRSTVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E ++ + G L I +D G Y
Sbjct: 67 GVVLLC-GPPPHFGDLSYAWTFND---NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|31980846|ref|NP_059079.2| contactin-6 precursor [Mus musculus]
gi|55976601|sp|Q9JMB8.2|CNTN6_MOUSE RecName: Full=Contactin-6; AltName: Full=Neural recognition molecule
NB-3; Short=mNB-3; Flags: Precursor
gi|26343141|dbj|BAC35227.1| unnamed protein product [Mus musculus]
gi|49903291|gb|AAH76594.1| Contactin 6 [Mus musculus]
Length = 1028
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 297/625 (47%), Gaps = 34/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G L+V + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K ++ + + + W +V E ++GYK+ +
Sbjct: 888 GPSSLPVNVTTKKSPPSQPPANIAWK-LSNSKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S +M
Sbjct: 947 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSS---- 996
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S + S +T L M Y F
Sbjct: 997 LSSTGVQISKPSTQSLSMVGVFYCF 1021
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 133/605 (21%), Positives = 234/605 (38%), Gaps = 81/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQI-ENGTLIITMLNISDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVV-------KSTVGKISTKTTVIVEGPPGL 182
+ + + ++ G L+I N + ADAG Y CV KS+ G + + T+I P +
Sbjct: 451 KQSKRV-LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKM 509
Query: 183 PGGV--------QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
V QV W D + + H++ I +V +
Sbjct: 510 DVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE-------SVGDL 562
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + +
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG---------PPGPPEDVKVEHISSTT 613
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S++ SW P P N+P + I R +Q+ T+ E N
Sbjct: 614 SQL------------SWRPGP--DNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYN 659
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N++G G S+ + + +P VAP + G + + + +
Sbjct: 660 ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVI 719
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT---------RNWALIVGLQ 460
TW I +N G G+ + + P T + R RN +++
Sbjct: 720 TWEAIPEELQN--GEGFGYIVMF----RPVGTTAWMKERVALVESSKFIYRNESIM---- 769
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++ +
Sbjct: 770 PLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWN 829
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY+V W D I GN +I L Y V A++ G G
Sbjct: 830 RNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTG 888
Query: 581 RMSSP 585
S P
Sbjct: 889 PSSLP 893
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + ++ + C P P WK+ DG+ + G+ K ++ +L I ++D G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWKRLDGSPMP--GKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGQRLNTEE-------RIQIENGTLIITMLNISDSGIYQCAAEN 390
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATN- 64
+ + C P P + WK++G I G + G+L IS P + D GIY C ATN
Sbjct: 46 IILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
V + K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGEL---SYAWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ D G L +D G Y C V + S V+GPP
Sbjct: 162 --SPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDS 55
EG V + C P P F W D + +R+ + GNL + V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKG--RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G +VL + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 252 LGNPVPDISWKRLDGSPMPGKIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|109035933|ref|XP_001101681.1| PREDICTED: contactin-6 isoform 2 [Macaca mulatta]
gi|355559496|gb|EHH16224.1| Neural recognition molecule NB-3 [Macaca mulatta]
Length = 1029
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T++ + W G N PI + I +T ++ W + +
Sbjct: 600 PPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP + GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 9/232 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP V G + + + +TW P E
Sbjct: 668 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEE 727
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-RNWALIVGLQPDTKYYVKVMAYNN 474
L G +I R E+ A SR RN ++I P + + VKV YNN
Sbjct: 728 LQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRFVYRNESII----PLSPFEVKVGVYNN 783
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
GEG S + + PQ P ++ + + + V+W ++ + ++GY+V W
Sbjct: 784 EGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 843
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
D S + GN +I L Y V A++ G G S P
Sbjct: 844 TDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPV 894
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL +C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRMFL-LEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK 497
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 46 VILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|355746565|gb|EHH51179.1| hypothetical protein EGM_10513 [Macaca fascicularis]
Length = 1028
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGVGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L I+ +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTITNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHARISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L ITN S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTITNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDEKITLNCEARGNPSPHYRWQLNGSDIDTSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLV 202
>gi|330688421|ref|NP_001178388.1| contactin-6 precursor [Bos taurus]
Length = 1030
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 287/588 (48%), Gaps = 34/588 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G+Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LI+ + P + + ++ L C + +DV ++W+ NG I
Sbjct: 484 QFGVAKNTGSLIIKER-TVITVPPSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVD 238
P V+V + T+ + W G+ N PI + I ART ++ W VS E + GK +
Sbjct: 600 PPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN 659
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
A++ L PW YEF+V+AGN +G GEPS PS T + P AP+ I GGG
Sbjct: 660 -------ATVVG-LNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 711
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L I+WE +P E QN + Y + R T + E + + + R +
Sbjct: 712 GSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIP 770
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ +E+KV N G GP S I+S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 771 LSPFEIKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNR 830
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSR---TTRNWALIVGLQPDTKYYVKVMAYNNA 475
GR++G+ + YW +D+ E TT+N I GL+ +T Y+ V AYN A
Sbjct: 831 NT--GRVLGYEVLYWTDDSKESMIGKIRVSGNITTKN---ITGLKANTVYFASVRAYNTA 885
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 886 GTGPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQ 944
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
Q + I+ NT +V + Y + + S+GGDG S
Sbjct: 945 NRQSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 15/235 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G P + + +P VAP + G + + + +TW P E
Sbjct: 668 WVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEE 727
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G ++ R + KE P + ++ R I+ L P + +KV
Sbjct: 728 LQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRFIYRNEN----IIPLSP---FEIKVGV 780
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN GEGP S + + PQ P ++ + + + V+W ++ + ++GY+V
Sbjct: 781 YNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV 840
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W D S + GN +I L Y V A++ G G S P
Sbjct: 841 LYWTDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPV 894
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPIPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + +L C A + D Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQDTYLSIYDSLFWECKASGKP--DPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ N+D I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGERL-NLD------ERIQIENGTLIITMLNVSDSGIYQCAAEN 390
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + + +
Sbjct: 339 CKASGKPDPWYTWLKNGERLNLDERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 398 NAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISW-------KRGIESL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + + ++ G L+I N + +DAG Y C+ + G ++I++
Sbjct: 451 RQSKRVFL-LEDGSLKIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIK 497
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPIPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK +G +I S + G+L IS P + D G Y C ATN
Sbjct: 46 IILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGGSLAISSPRTDQDIGTYQCLATNS 105
Query: 66 HG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-----WEVDQDMSRAND 545
+ P PP V +K I+ TT ++WR S + I + R W+ +
Sbjct: 595 RGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPE--- 651
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
I G T +A +V L+P Y RV+A ++ G G S P+
Sbjct: 652 --ILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPS 690
>gi|355746564|gb|EHH51178.1| Neural recognition molecule NB-3 [Macaca fascicularis]
Length = 1029
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDIVIECKPNAFPRAAISWKRGTETLRQSKRMFLLEDGSLKIYNVTRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNAGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T++ + W G N PI + I +T ++ W + +
Sbjct: 600 PPEDVKVEEISSTTSQLSWRAGPDNNSPIQIFTIQTQTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP + GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 9/232 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP V G + + + +TW P E
Sbjct: 668 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPVNVNGGGGSRSELVITWESIPEE 727
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-RNWALIVGLQPDTKYYVKVMAYNN 474
L G +I R E+ A SR RN ++I P + + VKV YNN
Sbjct: 728 LQNGEGFGYIIMFRPVGSTTWTKEKVASVESSRFVYRNESII----PLSPFEVKVGVYNN 783
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
GEG S + + PQ P ++ + + + V+W ++ + ++GY+V W
Sbjct: 784 EGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYW 843
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
D S + GN +I L Y V A++ G G S P
Sbjct: 844 TDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPV 894
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGRPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL +C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWKCKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKNSFVQVGGDIVIECKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRMFL-LEDGSLKIYNVTRSDAGSYTCIATNQFGTAKNAGSLIVK 497
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 46 VILKCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGRPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|296475001|tpg|DAA17116.1| TPA: contactin 6 [Bos taurus]
Length = 1018
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 288/588 (48%), Gaps = 34/588 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I V+R D+G+Y+C ATN
Sbjct: 414 GGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCIATN 473
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LI+ + P + + ++ L C + +DV ++W+ NG I
Sbjct: 474 QFGVAKNTGSLIIKER-TVITVPPSTMDVTVGESIVLPCQVSRDPSVDVVFVWSFNGDVI 532
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 533 ---DFKKGMAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSADGDIIVRGPPG 589
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVD 238
P V+V + T+ + W G+ N PI + I ART ++ W VS E + GK +
Sbjct: 590 PPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPEILNGKTFN 649
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
A++ L PW YEF+V+AGN +G GEPS PS T + P AP+ I GGG
Sbjct: 650 -------ATVVG-LNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGG 701
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L I+WE +P E QN + Y + R T + E + + + R +
Sbjct: 702 GSRSELIITWESIPEELQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRF-IYRNENIIP 760
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ +E+KV N G GP S I+S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 761 LSPFEIKVGVYNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNR 820
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN A
Sbjct: 821 NT--GRVLGYEVLYWTDDSKESMIGKIRVSGNITTKN---ITGLKANTVYFASVRAYNTA 875
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 876 GTGPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQ 934
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
Q + I+ NT +V + Y + + S+GGDG S
Sbjct: 935 NRQSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 976
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 15/235 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G P + + +P VAP + G + + + +TW P E
Sbjct: 658 WVEYEFRVVAGNSIGIGEPSKPSELLRTKSSVPAVAPTNINGGGGSRSELIITWESIPEE 717
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G ++ R + KE P + ++ R I+ L P + +KV
Sbjct: 718 LQNGEDFGYIVMLRPVGSTTWTKERVPSVESSRFIYRNEN----IIPLSP---FEIKVGV 770
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN GEGP S + + PQ P ++ + + + V+W ++ + ++GY+V
Sbjct: 771 YNKEGEGPLSTASIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV 830
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W D S + GN +I L Y V A++ G G S P
Sbjct: 831 LYWTDDSKESMIGKIRVS-GNITTKNITGLKANTVYFASVRAYNTAGTGPSSPPV 884
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 229 AAKDSSVKLECFALGNPIPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 286
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + +L C A + D Y W
Sbjct: 287 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQDTYLSIYDSLFWECKASGKP--DPWYTWLK 343
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R ++L+E I I+ G L IT + +D+G Y+C ++
Sbjct: 344 NGER---LNLDE----RIQIENGTLIITMLNVSDSGIYQCAAEN 380
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + + +
Sbjct: 329 CKASGKPDPWYTWLKNGERLNLDERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQIIYA 387
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 388 NAELRVLASAPDFSKNPLKKYSVVQVGGDIVIECKPNAFPRATISW-------KRGIESL 440
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + + ++ G L+I N + +DAG Y C+ + G ++I++
Sbjct: 441 RQSKRVFL-LEDGSLKIYNVTRSDAGLYTCIATNQFGVAKNTGSLIIK 487
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 126 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 181
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 182 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 241
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 242 LGNPIPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 293
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 294 GRNLAKGQLIFYAPP 308
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK +G +I S + G+L IS P + D G Y C ATN
Sbjct: 36 IILNCAANGYPLPHYRWKHNGADIDFSMSYHYRLDGGSLAISSPRTDQDIGTYQCLATNS 95
Query: 66 HG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + K +L + + + +++ + + L C D++Y WT N
Sbjct: 96 LGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLC-GPPPHFGDLSYAWTFND--- 151
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 152 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 201
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-----WEVDQDMSRAND 545
+ P PP V +K I+ TT ++WR S + I + R W+ +
Sbjct: 585 RGPPGPPEDVRVKHISSTTCQLSWRPGSDNNSPIQIFSIQARTPFSVGWQAVSTVPE--- 641
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
I G T +A +V L+P Y RV+A ++ G G S P+
Sbjct: 642 --ILNGKTFNATVVGLNPWVEYEFRVVAGNSIGIGEPSKPS 680
>gi|291394024|ref|XP_002713237.1| PREDICTED: contactin-3-like [Oryctolagus cuniculus]
Length = 1079
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 284/581 (48%), Gaps = 19/581 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTAT 63
G V + C P A+P+ WK+ ++ R + E+G L I+ V++ D+G+Y+CTA
Sbjct: 425 GSVVNLDCKPRASPRALSSWKRGDTMVQEHDRYWVLPEDGRLKITNVTKADTGMYTCTAE 484
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G L+V P+ P + ++ ++ L C + LLD+ + W NGV
Sbjct: 485 NQFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGVL 543
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG
Sbjct: 544 TDFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGP 602
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
P V+VVE+ T+A + W +G N PI Y I ART ++ W V+ + + +D G
Sbjct: 603 PENVKVVEITDTTAQLSWEEGTDNHSPIITYSIQARTPFSVGWQAVT--TVPEVID---G 657
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
+ + L PW YEF+V+A N++G GEPS PS + T P PS + GGGG
Sbjct: 658 KTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRS 717
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+W+P+P E QN Y + +R T + +T+ + V R S ++ Y
Sbjct: 718 ELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPFSPY 776
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN + N
Sbjct: 777 EVKVGVYNNRGEGPFSPVATVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTVPWKLSN-- 834
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
G L+G+ ++YW E+ + A + GL+ + YY V AYN+AG GP S
Sbjct: 835 GHLLGYEVRYWNNGEEEDLSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFST 894
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P +PP V + T V + W V E + GYKV S
Sbjct: 895 TVNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFY-----RTSS 948
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
N+ + N A+++ L + Y + V A ++GGDG S
Sbjct: 949 QNNMQVLSTNKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 988
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 240 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDTGSYEC 298
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 299 IAENSRGKNVARGRLTYYAKP-HWVQLIRDVEIAVEDNLHWECRASGKP--KPSYRWLKN 355
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 356 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 408
Query: 179 P 179
P
Sbjct: 409 P 409
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 340 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 398
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L + + G+
Sbjct: 399 SAELKVVASAPDFSKNPMKKLVQVQVGSVVNLDCKPRASPRAL---------SSWKRGDT 449
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E + + + G L+ITN + AD G Y C ++ GK + T ++V P
Sbjct: 450 MVQEHDRYWVLPEDGRLKITNVTKADTGMYTCTAENQFGKANGTTHLVVTEP 501
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL-LISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL +I+P D+G Y C
Sbjct: 43 EDKKITLTCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGSYQCF 102
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 103 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 159
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 160 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 203
>gi|332815945|ref|XP_003309633.1| PREDICTED: contactin-6 [Pan troglodytes]
Length = 1019
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 292/624 (46%), Gaps = 31/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 415 GGDIVIGCKPNGFPRAAISWKRGTETLRQSKRVFLLEDGSLKIYNITRSDAGSYTCIATN 474
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 475 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 533
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 534 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 590
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 591 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 645
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 646 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 705
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 706 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 764
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 765 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 823
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 824 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 879
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 880 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 938
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ I+ NT +V + Y + + S+GGDG S ++ +
Sbjct: 939 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLS 989
Query: 599 SGSPALYSASTTLLLVMSSTLYIF 622
S ST L ++ Y F
Sbjct: 990 SRGIQCLEPSTHFLSIVIVIFYCF 1013
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 230 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 287
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 288 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 344
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 345 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 381
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 330 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 388
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 389 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNGFPRAAISWKR-----GTETLRQ 443
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 444 SKRVFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 488
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P++ WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 37 VVLNCAANGYPSPRYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 96
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 97 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 152
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 153 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 202
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 127 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 182
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 183 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 242
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 243 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 294
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 295 GRNLAKGQLIFYAPP 309
>gi|395733532|ref|XP_002813561.2| PREDICTED: contactin-3 [Pongo abelii]
Length = 958
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 284/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P+A+P+ WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 354 GSLVSLDCKPKASPRAHSSWKKGDVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAEN 413
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 414 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 472
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 473 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 531
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+T Y I ART ++ W V+ + + +D G+
Sbjct: 532 ENVKVDEITDTTAQLSWKEGKDNHSPVTSYSIQARTPFSVGWQTVT--TVPEVID---GK 586
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 587 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 646
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 647 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 705
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 706 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNIIPWKLSN--G 763
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 764 HLLGYEVRYWNGGGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 823
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 824 VNVTTKKMPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESQVTGYKVFYRTSSQNNVQV 882
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 883 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 916
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 269 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 327
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C A H+ + G++ +
Sbjct: 328 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPK-------ASPRAHSSWKKGDVSV 380
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 381 QEHERISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 429
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 22/173 (12%)
Query: 9 TIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATN 64
T+ C +PE + + W + + + RR + E G+L IS V D G Y+C T+
Sbjct: 71 TLLCGSPEHFEQLSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTS 130
Query: 65 VHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
+ G L + P Q P + A ++L C A + +
Sbjct: 131 MVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQIN 190
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 191 WRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 235
>gi|114587894|ref|XP_526232.2| PREDICTED: contactin-3 isoform 3 [Pan troglodytes]
gi|410212392|gb|JAA03415.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410251446|gb|JAA13690.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410291610|gb|JAA24405.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
gi|410329979|gb|JAA33936.1| contactin 3 (plasmacytoma associated) [Pan troglodytes]
Length = 1028
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 282/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|363738787|ref|XP_414433.3| PREDICTED: contactin-3 [Gallus gallus]
Length = 910
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 295/618 (47%), Gaps = 20/618 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V C P+A+PK + WKK G + R + ++G L I+ V++ D+G Y+C ATN
Sbjct: 306 GSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATN 365
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + + ++ L C + +LD+++ W NG
Sbjct: 366 QFGTASGTTNLVVTE-PTRIILAPSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLT 424
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+VK+ V +++ +IV G PG P
Sbjct: 425 DFKKDASHFEKVGGSASGDLM-IRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPP 483
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A I W +G N P+T Y I ART ++ W V+ D G
Sbjct: 484 EHVRVDEITDTTAQISWQEGTDNHSPVTAYTIQARTPFSVGWQRVT-----TVPDVIDGN 538
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P P+ + GGGG +
Sbjct: 539 TFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSE 598
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 599 LVITWDPIPEELQNGEGFGYVVAFRPFGTTTW-IQTVVTSPDTPRYVFRNESILPFSPYE 657
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S + T+FSAE+ P VAP GV +S+ I V+W I + G
Sbjct: 658 VKVGVYNNKGEGPFSSITTVFSAEEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSS--G 715
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + I GL+ + YY V AYN+AG GP S
Sbjct: 716 RLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYTAVRAYNSAGAGPFSAT 775
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + + + V + W V E + GYKV Q+
Sbjct: 776 VNATTKKTPPSQPPGNV-VWNVTDSRVILNWEEVRAMENESEVTGYKVLYRTSGQNNMNV 834
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 603
+T + A+++ L + Y + V A + GGDG S + ++ SG
Sbjct: 835 LNT-----DKTTAELL-LPFNEDYIIEVKATTEGGDGTSSDQILIPRLASMDARGSGPST 888
Query: 604 L--YSASTTLLLVMSSTL 619
L +S S+ L V S TL
Sbjct: 889 LNIFSLSSILPTVFSFTL 906
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 75/170 (44%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + GR +I ENG L IS ++ DSG Y C A N HG+ S
Sbjct: 221 CRASGKPKPSYRWLKNGEQLSVEGRIQI-ENGALTISSLNLTDSGRYQCIAENKHGVIYS 279
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K I + + C ++ + G L
Sbjct: 280 SAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSW-------KKGGEQL 332
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+E E + DGG L ITN + DAG Y CV + G S T ++V P
Sbjct: 333 HENERITLLKDGG-LRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEP 381
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + + NG + I ++D+G+Y C
Sbjct: 121 AAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECI 180
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G + ++GRL P ++ Q+ IA L C A + +Y W NG
Sbjct: 181 TENSRGKNIARGRLTYYAKP-HWIQMIKDTEIAVEDTLYWDCRASGKP--KPSYRWLKNG 237
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
++ I I+ G L I++ + D+G Y+C+ ++ G I S + V+ P
Sbjct: 238 EQLSVEG-------RIQIENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASAP 290
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 24/225 (10%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P A + F W + + + RR + E G+L I+ V D G Y+
Sbjct: 18 EGQGVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYT 77
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + ++ G P Q P + A ++L C A
Sbjct: 78 CVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 137
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + T + L + G++EI N DAG YEC+ +++ GK
Sbjct: 138 VPQINWRRTDGMPFPSKIKLRK--------SNGMIEIPNFQQEDAGLYECITENSRGKNI 189
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P ++ E+ T+ W D +G+P Y+
Sbjct: 190 ARGRLTYYAKPHWIQMIKDTEI-AVEDTLYW-DCRASGKPKPSYR 232
>gi|397489669|ref|XP_003815845.1| PREDICTED: LOW QUALITY PROTEIN: contactin-3-like [Pan paniscus]
Length = 1028
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 282/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGTGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P + + E +P+V P V G + + + +TW+P+ E
Sbjct: 668 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEE 727
Query: 416 LIRENIRGRLIGHR---IKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
L G ++ R + W + +T Y RN +++ P + Y VKV
Sbjct: 728 LQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVF----RNESIV----PYSPYEVKVG 779
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEGP S + + P PS V ++ + + V+W + ++GY+
Sbjct: 780 VYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYE 839
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
VR W ++ + GN A + L Y+ V A+++ G G S+
Sbjct: 840 VRYWN-GGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGTGPFSA 892
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCXPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCXPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|440901336|gb|ELR52306.1| Contactin-2, partial [Bos grunniens mutus]
Length = 1018
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 268/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L+I VSR D G Y+C
Sbjct: 408 AARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGKYTCF 467
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ ++WT +
Sbjct: 468 AENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDD 526
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + ++ G L I NA G+Y C ++ V S + TV+V GPP
Sbjct: 527 FPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPP 586
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ TS + W+ G N PI Y + ART + W V + E
Sbjct: 587 GAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE---- 642
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 643 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGA 701
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+++W P+ RE Q+ Y + +R++ T +Q+ + + V S YT
Sbjct: 702 PGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYT 760
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES V ++SAE+ P+VAP V+++ +S+ +NV+W P++ ++
Sbjct: 761 PFEVKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQ---QD 817
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK A + AL+ GL TKY+V V AYN AG GP
Sbjct: 818 MNGILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPA 877
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 878 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLGNESAVTGYKM 927
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + VTW P+
Sbjct: 656 WMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMS-- 713
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ P A Y++ ++P T + VK+
Sbjct: 714 REYQHGGGFGYLVSFRRQGGTSWQTARVPGADAQYFVYSND-------SIRPYTPFEVKI 766
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES + + + P+ P V K ++ + ++V+W V ++GY
Sbjct: 767 RSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQQDMNGI-LLGY 825
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ + A + + G A + L +YH+ V A++ G G S A
Sbjct: 826 EIRYWKAGA-KAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPASPSANAT 884
Query: 590 QM 591
M
Sbjct: 885 TM 886
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I V +D G Y C
Sbjct: 228 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVGFEDEGTYEC 284
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + +L C+A + A W N
Sbjct: 285 EAENTKGRDTVQGRIIVQAQPEWLRVISDREADIGS-DLHWACAAAGKP--RPAVRWLRN 341
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 342 GEPLTSQA-------RVEVMAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 392
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G + G R+ GNL+I +P D+G+Y C A+N
Sbjct: 35 VTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASNP 94
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 95 VGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 149
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 150 ----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 197
>gi|359073808|ref|XP_003587094.1| PREDICTED: contactin-2-like [Bos taurus]
Length = 1040
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 268/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L+I VSR D G Y+C
Sbjct: 430 AARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNVSRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ ++WT +
Sbjct: 490 AENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + ++ G L I NA G+Y C ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ TS + W+ G N PI Y + ART + W V + E
Sbjct: 609 GAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+++W P+ RE Q+ Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES V ++SAE+ P+VAP V+++ +S+ +NV+W P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK A + AL+ GL TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLGNESAVTGYKM 949
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + VTW P+
Sbjct: 678 WMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ P A Y++ ++P T + VK+
Sbjct: 736 REYQHGGGFGYLVSFRRQGGTSWQTARVPGADAQYFVYSND-------SIRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES + + + P+ P V K ++ + ++V+W V ++GY
Sbjct: 789 RSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ + A + + G A + L +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAGAKAA-AAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPASPSA 903
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I V +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVGFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + +L C+A + A W N
Sbjct: 307 EAENTKGRDTVQGRIIVQAQPEWLRVISDR-EADIGSDLHWACAAAGKP--RPAVRWLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLTSQA-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G + G R+ GNL+I +P D+G+Y C A+N
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMKLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASNP 116
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 117 VGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 171
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 ----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|380788833|gb|AFE66292.1| contactin-3 precursor [Macaca mulatta]
Length = 1028
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 283/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW E+++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEKSSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHARISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N S D+G ++C+ ++ G + S + V+
Sbjct: 355 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I + + NG ++I+P D+G Y C
Sbjct: 42 EDEKITLNCEARGNPSPHYRWQLNGSDIDTTMEHRYKLNGGNLVVINPNRNWDTGAYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSLV 202
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSLVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------NGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|281343741|gb|EFB19325.1| hypothetical protein PANDA_017735 [Ailuropoda melanoleuca]
Length = 1037
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 19/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+PKP WKK I+ R ++G L I+ V++ D G Y+C A N
Sbjct: 449 GSMVSLDCKPRASPKPLCSWKKGDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAEN 508
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 509 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALT 567
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 568 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 626
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 627 ENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 681
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 682 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 741
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 742 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 800
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 801 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 858
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW + EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 859 HLLGYEVRYWN-NGEEESSSKVKVGGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTT 917
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 918 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 976
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 977 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 1010
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 364 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 422
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + +L + A + L W + G++
Sbjct: 423 SAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCS----W-----KKGDV 473
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + AD G Y C+ ++ GK + T ++V P
Sbjct: 474 IVQENERISFLKDGG-LKIANVTKADVGTYTCIAENQFGKANGTTRLVVTEP 524
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + S + NG L I ++D+G Y C
Sbjct: 264 AAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECI 323
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL P ++ QL + IA NL C A + +Y W NG
Sbjct: 324 AENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKNG 380
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L E I I+ G L I+N + D+G ++C+ ++ G + S + V+ P
Sbjct: 381 ---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAP 433
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 67 EDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSYQCF 126
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 127 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 183
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 184 FNEYP---SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTV 227
>gi|301784957|ref|XP_002927893.1| PREDICTED: contactin-3-like [Ailuropoda melanoleuca]
Length = 1027
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 283/580 (48%), Gaps = 19/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+PKP WKK I+ R ++G L I+ V++ D G Y+C A N
Sbjct: 424 GSMVSLDCKPRASPKPLCSWKKGDVIVQENERISFLKDGGLKIANVTKADVGTYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGIDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW + EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWN-NGEEESSSKVKVGGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSTT 892
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 893 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 951
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 952 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 985
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + +L + A + L W + G++
Sbjct: 398 SAELKVVASAPDFSKTPMKKLIQVQVGSMVSLDCKPRASPKPLCS----W-----KKGDV 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + AD G Y C+ ++ GK + T ++V P
Sbjct: 449 IVQENERISFLKDGG-LKIANVTKADVGTYTCIAENQFGKANGTTRLVVTEP 499
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P+ W++ + S + NG L I ++D+G Y C
Sbjct: 239 AAKGATVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFNGVLEIPDFQQEDTGSYECI 298
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL P ++ QL + IA NL C A + +Y W NG
Sbjct: 299 AENSRGRNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLFWECRASGKP--KPSYRWLKNG 355
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L E I I+ G L I+N + D+G ++C+ ++ G + S + V+ P
Sbjct: 356 EA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASAP 408
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTV 202
>gi|351706113|gb|EHB09032.1| Contactin-6 [Heterocephalus glaber]
Length = 980
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 292/621 (47%), Gaps = 25/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 375 GGDISIECKPNAFPRAAISWKRGSESLRQSKRVFLLEDGSLKIHNVTRSDAGPYTCIATN 434
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G LIV + P K+ + ++ L C + ++V + W+ NG I
Sbjct: 435 QFGIAKNTGSLIVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFAWSFNGNII 493
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N + +G+Y C V++T+ ++S +IV GPPG
Sbjct: 494 ---DLQKQVAHFEKIGGESVGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVRGPPG 550
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ I W G N PI + + RT ++ W + +
Sbjct: 551 PPEDVRVEHISSTTSQISWRPGPDNNSPIQIFTVQTRTPFSVGW-----QAVATVPEILN 605
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L W YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 606 GQTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGGGGR 665
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + V R S +
Sbjct: 666 YELVITWESIPEELQNGEGFGYIVMFRPVGSTAWTKERVPLVESSKF-VYRNESIMPLSP 724
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G GP S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 725 FEVKVGVYNNEGEGPLSTVSIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 783
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
GR++G+ + YW +D+ E I GL+ +T Y+ V AYN AG GP S
Sbjct: 784 -GRVLGYEVLYWTDDSKESIIGKIRVSGNVTNKSITGLKANTVYFASVRAYNTAGTGPSS 842
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P +PP+ + K N + + + W +V E ++GYK+ + Q +
Sbjct: 843 LPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQSKT 901
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGS 601
I+ NT +V + Y + + S+GGDG S ++ + S
Sbjct: 902 H----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLSSRG 952
Query: 602 PALYSASTTLLLVMSSTLYIF 622
+ + L V+ T Y F
Sbjct: 953 IHILEPTAHFLPVVVVTFYCF 973
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 136/607 (22%), Positives = 228/607 (37%), Gaps = 83/607 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + S R +I ENG L I+ ++ DSG+Y C A N + + +
Sbjct: 290 CKASGKPNPWYTWLKNGERLNSEERIQI-ENGTLTITILNVSDSGVYQCAAENKYQIIYA 348
Query: 72 KGRLIVL-HGPSYYEQLPPKITIAA-HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI+I ++ + C + A W G+ L
Sbjct: 349 NAELRVLASAPDFSKSPIKKISIVQIGGDISIECKPNA--FPRAAISWKR-----GSESL 401
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG-- 181
+ + + ++ G L+I N + +DAG Y C+ + G + K I+ PP
Sbjct: 402 RQSKRVFL-LEDGSLKIHNVTRSDAGPYTCIATNQFGIAKNTGSLIVKERTIITVPPSKM 460
Query: 182 ---------LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
LP QV W + NG I K +A + +
Sbjct: 461 DVTVGESIVLP--CQVSHDPSIEVVFAW---SFNGNIIDLQKQVAH------FEKIGGES 509
Query: 233 IGKEVDR-----YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+G + R ++G+ ++ L S ++ G P P + +
Sbjct: 510 VGDLMIRNIQLSHSGKYLCTVRTTLERLSAVADIIVRG---------PPGPPEDVRVEHI 560
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
S+ ISW P P N+P + + R +Q+ T+ E N
Sbjct: 561 SSTTSQ------------ISWRPGP--DNNSPIQIFTVQTRTPFSVGWQAVATVPEILNG 606
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNST 405
+ + EYE +V A N +G G S+ + + +P +AP + G
Sbjct: 607 QTYNATVVGLSSWVEYEFRVVAGNSIGIGEPSKPSKLLRTKASVPVLAPVNINGGGGGRY 666
Query: 406 AINVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ +TW P EL G ++ R + KE P + ++ R +
Sbjct: 667 ELVITWESIPEELQNGEGFGYIVMFRPVGSTAWTKERVPLVESSKFVYRNE-------SI 719
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P + + VKV YNN GEGP S + + PQ P ++ + + + V+W ++
Sbjct: 720 MPLSPFEVKVGVYNNEGEGPLSTVSIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAW 779
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ ++GY+V W D S + GN + I L Y V A++ G
Sbjct: 780 NRNTGRVLGYEVLYWTDDSKESIIGKIRVS-GNVTNKSITGLKANTVYFASVRAYNTAGT 838
Query: 580 GRMSSPA 586
G S P
Sbjct: 839 GPSSLPV 845
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN---LLISPVSRDDSGIY 58
A + +V + C P P W++ + GS RKI + + L I ++D G Y
Sbjct: 190 AAKDSSVKLECFALGNPVPDISWRR---LDGSPLPRKIKYSKSQAILEIPNFQQEDEGFY 246
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A N+ G + +KG+LI + P +E ++ + NL C A + + Y W
Sbjct: 247 ECLAGNLRGRNLAKGQLI-FYAPPEWEHKIQNTYLSIYDNLYWECKASGKP--NPWYTWL 303
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + + I I+ G L IT + +D+G Y+C ++
Sbjct: 304 KNGERLNSEE-------RIQIENGTLTITILNVSDSGVYQCAAEN 341
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 20/151 (13%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPK 90
E GNL I+ V D G Y+C TN +G L + P + P
Sbjct: 128 ETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPET 187
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNA 149
I A +++L C A + D+++ +D + L + +LEI N
Sbjct: 188 IQAAKDSSVKLECFALGNPVPDISW---------RRLDGSPLPRKIKYSKSQAILEIPNF 238
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
D G YEC+ + G+ K +I PP
Sbjct: 239 QQEDEGFYECLAGNLRGRNLAKGQLIFYAPP 269
>gi|327266146|ref|XP_003217867.1| PREDICTED: contactin-3-like [Anolis carolinensis]
Length = 920
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 188/621 (30%), Positives = 302/621 (48%), Gaps = 22/621 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G C P+A+P+ WKK G ++ R + ++G L I+ VS+ D+G Y+C A N
Sbjct: 317 GSTAHFECKPKASPRAMITWKKGGELLQENERISLLKDGGLRIANVSKSDAGSYTCLAEN 376
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S L+V P+ P + + ++ L C + LLDV++ W N
Sbjct: 377 QFGKASSSTSLLVTE-PTRITLAPSNMDVTVGESVILPCQVQHDPLLDVSFTWYFNSALT 435
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C VK+ V +S+ +IV G PG P
Sbjct: 436 DFRKDASHFERVGGSASGDLM-IRNIQLKHSGKYVCTVKTEVDSVSSAAELIVRGSPGPP 494
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+T Y + ART ++ W V+ + + +D G+
Sbjct: 495 ENVKVDEITATTAWLSWYEGLDNHSPVTGYTVQARTPFSVGWQRVT--TVPEVID---GK 549
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+++A N++G GEPS PS + T P PS + GGGG +
Sbjct: 550 TFTATAVDLNPWVEYEFRIVASNKIGGGEPSLPSEKVRTKEAVPEVPPSEVSGGGGSRSE 609
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R + + +T+ + V R S ++ YE
Sbjct: 610 LVITWDPVPEELQNGEGFGYVVAFRPLGVSTW-IQTVVTSPDTPRYVFRNESILPFSPYE 668
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T++SAE+ P VAP GV + +S+ I V+W I + + G
Sbjct: 669 VKVGVYNNKGEGPFSSVATVYSAEEEPTVAPSGVAASSLSSSVIEVSW--ISIPWKMSSG 726
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW E+++ + I GL+ + Y+ V AYN+AG GP S
Sbjct: 727 RLLGYEVRYWNNGGKEQSSNRVKAIGNETSVRITGLKSNLVYFTAVRAYNSAGAGPFSAT 786
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP + + ++ + V + W V E +IGYKV +Q
Sbjct: 787 VNATTKKTPPSQPPGNI-VWNVSDSRVVLNWEQVHAMENESEVIGYKVLYRTSNQ----- 840
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPA 603
N + + N A+++ L Y + V A ++GGDG S ++ SG+
Sbjct: 841 NQLSVLITNRTSAELL-LPLNDDYIIEVKAATDGGDGISSEQIKIPKLASMDARGSGADI 899
Query: 604 LYSAST----TLLLVMSSTLY 620
L+ S+ T+ L+ + L+
Sbjct: 900 LHCRSSFMSITVFLIFEAVLW 920
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + GR +I ENG L+I+ ++ DSGIY C A N HG S
Sbjct: 232 CRASGKPKPSYRWLKNGDPLTIEGRIQI-ENGALIITNLNLTDSGIYQCVAENKHGTIYS 290
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + C + + + G L
Sbjct: 291 SADLRVVASAPDFSKNPMKKLLQLLMGSTAHFECKPKASPRAMITW-------KKGGELL 343
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L I N S +DAG Y C+ ++ GK S+ T+++V P
Sbjct: 344 QENERISLLKDGG-LRIANVSKSDAGSYTCLAENQFGKASSSTSLLVTEP 392
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DGN S + NG + I ++D+G+Y C
Sbjct: 132 AAKGSTVKLECFALGNPVPRINWRRTDGNPFPSKVMLRK-SNGMIEIPNFQQEDAGLYEC 190
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N G + ++GRL P ++ QL A NL C A + +Y W N
Sbjct: 191 ITENSRGKNIARGRLTYYAKP-HWVQLIKDFEAAVEDNLYWECRASGKP--KPSYRWLKN 247
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D +E I I+ G L ITN + D+G Y+CV ++ G I S V+
Sbjct: 248 G------DPLTIEG-RIQIENGALIITNLNLTDSGIYQCVAENKHGTIYSSADLRVVASA 300
Query: 179 P 179
P
Sbjct: 301 P 301
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNPE---AAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L I+ V D G Y+
Sbjct: 29 EGQGVVLLCGPPTHYGEFSYAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVESSDVGNYT 88
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN H + ++ G P Q P + A ++L C A
Sbjct: 89 CVVTSTVTNSHSLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 148
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + T + L + G++EI N DAG YEC+ +++ GK
Sbjct: 149 VPRINWRRTDGNPFPSKVMLRK--------SNGMIEIPNFQQEDAGLYECITENSRGK 198
>gi|7959253|dbj|BAA96020.1| KIAA1496 protein [Homo sapiens]
Length = 920
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 316 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 375
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 376 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 434
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 435 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 493
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 494 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 548
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 549 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 608
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 609 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 667
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 668 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 725
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 726 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 785
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 786 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 844
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 845 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 878
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 231 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 289
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 290 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-------KKGDVSV 342
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 343 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 391
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 28 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 87
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 88 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 147
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 148 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 197
>gi|345786238|ref|XP_003432801.1| PREDICTED: contactin-6 [Canis lupus familiaris]
Length = 956
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 286/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 352 GGDITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 411
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L+V + P K+ + ++ L C + ++V +IW+ NG I
Sbjct: 412 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 470
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + T I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 471 ---DLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 527
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G+ N PI + + ART ++ W + +
Sbjct: 528 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILN 582
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ I GGGG
Sbjct: 583 GKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 642
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I R T + + + + V R S +
Sbjct: 643 SELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSP 701
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP G + F+++ + V+WN I R
Sbjct: 702 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWNAIAWNRNT- 760
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN+AG G
Sbjct: 761 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNSAGAG 816
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 817 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 875
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 876 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 914
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 130/606 (21%), Positives = 230/606 (37%), Gaps = 83/606 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 267 CRASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 325
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L VL + + P K + + ++ + +A ++ W G
Sbjct: 326 NAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVIS----WKR-----GME 376
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG 181
L + + ++ DG L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 377 SLRQSKRVFLSEDGS-LKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPS 435
Query: 182 -----------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFN 227
LP QV W+ D + +TH++ I +
Sbjct: 436 KMDVTVGESIVLP--CQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGE-------S 486
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
V + +I ++G+ +++ L S ++ G P P + +
Sbjct: 487 VGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRG---------PPGPPEDVRVEHI 537
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
S+ +SW P N+P + + R +Q+ T+ E N
Sbjct: 538 SSTTSQ------------LSWR--PGSDNNSPIQIFTVQARTPFSVGWQAVSTVPEILNG 583
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNST 405
+ + EYE +V A N +G G S+ + + +P VAP + G + +
Sbjct: 584 KTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRS 643
Query: 406 AINVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ +TW P EL G +I R + K+ P + ++ R +
Sbjct: 644 ELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRFVYRNE-------SI 696
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++
Sbjct: 697 TPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWNAIAW 756
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ ++GY+V W D S + GN +I L Y V A+++ G
Sbjct: 757 NRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNSAGA 815
Query: 580 GRMSSP 585
G S P
Sbjct: 816 GPSSPP 821
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DGN + G+ K ++ +L P ++D G Y
Sbjct: 167 AAKDSSVKLECFALGNPVPDISWRRLDGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 224
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y W
Sbjct: 225 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECRASGKP--NPWYTWLK 281
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 282 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 318
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 55
EG V + C P P F W + N + ++ F E GNL I+ V D
Sbjct: 64 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDV 119
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 120 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 179
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 180 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 231
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 232 GRNLAKGQLIFYAPP 246
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 40 FENGNLLIS-PVSRDDSGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHR 97
+ GNL IS P + D GIY C ATN G S K +L + + + +++ +
Sbjct: 7 LDGGNLAISSPRTDQDIGIYQCLATNTLGTILSRKAKLQFAYIEDFETKTRSMVSVREGQ 66
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C D++Y WT N + + E + ++ + G L I +D G Y
Sbjct: 67 GVVLLC-GPPPHFGDLSYAWTFND---NPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNY 122
Query: 158 ECVVKSTVGKISTKTTVIVEGPP 180
C + + + S V+GPP
Sbjct: 123 TCFITNKEAQRS------VQGPP 139
>gi|223462499|gb|AAI50609.1| Contactin 3 (plasmacytoma associated) [Homo sapiens]
Length = 1028
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|345786236|ref|XP_541801.3| PREDICTED: contactin-6 isoform 1 [Canis lupus familiaris]
Length = 1028
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 290/586 (49%), Gaps = 30/586 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDITIECKPNAFPRAVISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L+V + P K+ + ++ L C + ++V +IW+ NG I
Sbjct: 484 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + T I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVTHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G+ N PI + + ART ++ W + +
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGW-----QAVSTVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ I GGGG
Sbjct: 655 GKTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I R T + + + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRF-VYRNESITPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW +D+ +E+ + + + TT+N I GL+ +T Y+ V AYN+AG
Sbjct: 833 -GRVLGYEVLYWTDDS-KESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNSAGA 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
Q + I+ NT +V + Y + + S+GGDG S
Sbjct: 947 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 130/607 (21%), Positives = 230/607 (37%), Gaps = 83/607 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CRASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L VL + + P K + + ++ + +A ++ W G
Sbjct: 398 NAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRAVIS----WKR-----GME 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG 181
L + + ++ DG L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 449 SLRQSKRVFLSEDGS-LKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITIPPS 507
Query: 182 -----------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFN 227
LP QV W+ D + +TH++ I +
Sbjct: 508 KMDVTVGESIVLP--CQVSHDPSIEVVFIWSFNGDVIDLKKGVTHFERIGGE-------S 558
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
V + +I ++G+ +++ L S ++ G P P + +
Sbjct: 559 VGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRG---------PPGPPEDVRVEHI 609
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
S+ +SW P N+P + + R +Q+ T+ E N
Sbjct: 610 SSTTSQ------------LSWR--PGSDNNSPIQIFTVQARTPFSVGWQAVSTVPEILNG 655
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNST 405
+ + EYE +V A N +G G S+ + + +P VAP + G + +
Sbjct: 656 KTYNATVIGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRS 715
Query: 406 AINVTWN--PIELIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ +TW P EL G +I R + K+ P + ++ R +
Sbjct: 716 ELVITWESIPEELQNGEEFGYIIMLRPVGSTSWTKKRVPSVESSRFVYRNE-------SI 768
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++
Sbjct: 769 TPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPGGTSVQSFSASEMEVSWNAIAW 828
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ ++GY+V W D S + GN +I L Y V A+++ G
Sbjct: 829 NRNTGRVLGYEVLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNSAGA 887
Query: 580 GRMSSPA 586
G S P
Sbjct: 888 GPSSPPV 894
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DGN + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + + Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECRASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT 63
+ + C P P + WK++G + I S R + GNL IS P + D GIY C AT
Sbjct: 46 IILNCAATGYPSPHYRWKQNGTDIDFIMSYHYR--LDGGNLAISSPRTDQDIGIYQCLAT 103
Query: 64 NVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 104 NTLGTILSRKAKLQFAYIEDFETKTRSMVSVREGQGVVLLC-GPPPHFGDLSYAWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 --NPLYVQEDKRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDS 55
EG V + C P P F W + N + ++ F E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDKRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|75709184|ref|NP_065923.1| contactin-3 precursor [Homo sapiens]
gi|296439395|sp|Q9P232.3|CNTN3_HUMAN RecName: Full=Contactin-3; AltName: Full=Brain-derived
immunoglobulin superfamily protein 1; Short=BIG-1;
AltName: Full=Plasmacytoma-associated neuronal
glycoprotein; Flags: Precursor
gi|168275494|dbj|BAG10467.1| contactin-3 precursor [synthetic construct]
Length = 1028
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL-LISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL +I+P D+G Y C
Sbjct: 42 EDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|119585939|gb|EAW65535.1| contactin 3 (plasmacytoma associated) [Homo sapiens]
Length = 901
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 297 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 356
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 357 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 415
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 416 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 474
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 475 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 529
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 530 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 589
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 590 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 648
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 649 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 706
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 707 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 766
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 767 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 825
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 826 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 859
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 212 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 270
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 271 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-------KKGDVSV 323
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 324 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 372
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 9 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 68
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 69 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 128
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 129 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 178
>gi|332231546|ref|XP_003264956.1| PREDICTED: contactin-3 [Nomascus leucogenys]
Length = 1028
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 283/582 (48%), Gaps = 22/582 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRARSSWKKGDVSVQEHERISLLKDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKASGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGAL- 541
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + + + G G L I N +G+Y C+V++ V +S+ +IV G PG
Sbjct: 542 --ADFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D
Sbjct: 600 PPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID--- 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+A N++G GEPS PS + T P PS + GGGG
Sbjct: 655 GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+W+P+P E QN Y + +R T + +T+ + V R S Y+
Sbjct: 715 SELVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
YEVKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N
Sbjct: 774 YEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
G L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 833 -GHLLGYEVRYWNGGGKEESSSKVKVAGNETSARLQGLKSNLAYYTAVRAYNSAGSGPFS 891
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P +PP V + T V + W V E + GYKV Q+
Sbjct: 892 ATVNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV 950
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ +T N A+++ L + Y + V A ++GGDG S
Sbjct: 951 QVLNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W KDG + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKDGAALVLEERIQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK S T ++V P
Sbjct: 451 QEHERISLLKDGG-LKIANVTKADAGTYTCMAENQFGKASGTTHLVVTEP 499
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P + + E +P+V P V G + + + +TW+P+ E
Sbjct: 668 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEE 727
Query: 416 LIRENIRGRLIGHR---IKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
L G ++ R + W + +T Y RN +++ P + Y VKV
Sbjct: 728 LQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVF----RNESIV----PYSPYEVKVG 779
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEGP S + + P PS V ++ + + V+W + ++GY+
Sbjct: 780 VYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYE 839
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
VR W ++ + GN A + L Y+ V A+++ G G S+
Sbjct: 840 VRYWN-GGGKEESSSKVKVAGNETSARLQGLKSNLAYYTAVRAYNSAGSGPFSA 892
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSAVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
>gi|403297272|ref|XP_003939499.1| PREDICTED: contactin-3 [Saimiri boliviensis boliviensis]
Length = 1028
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPTAHSFWKKGDVNVQEHERITLLKDGELKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W ++ + + +D G+
Sbjct: 602 ENVRVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNSGGKEESSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 148/631 (23%), Positives = 236/631 (37%), Gaps = 106/631 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDAEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179
G + L E I I+ G L I+N S D+G ++C+ ++ G I S+ +V
Sbjct: 355 GAA---LVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P V ++ D P H + W NV EH +R
Sbjct: 408 PDFSKSPMKKLVQVQVGSLVSLDCKPRASPTAH------SFWKKGDVNVQEH------ER 455
Query: 240 YTGRK--EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T K E I NV + +A N+ +G+ + + T + APS +
Sbjct: 456 ITLLKDGELKIANV-TKADAGTYTCMAENQ--FGKANGTTHLVVTEPTRITLAPSNM--- 509
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIA 349
+G+ I LP + Q+ P + W KK+ + F+ G++ I
Sbjct: 510 DVSVGESVI----LPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIR 565
Query: 350 VVRIP-SEFYYTEYEVKVQAINDVG-------PGPESEVVTIFSAEDMPQVAPQGVFSRG 401
+++ S Y + V +++ PGP V +++ Q + G
Sbjct: 566 NIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV----RVDEITDTTAQLSWKEG 621
Query: 402 FNS------------TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
++ T +V W I + E I G+
Sbjct: 622 TDNHSPVISYSIQARTPFSVGWQTITTVPEVIDGK------------------------- 656
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPT 508
+ A +V L P +Y +V+A N G G P RT P+ PPS V+ G + +
Sbjct: 657 -THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRS 715
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVD-----QDMSRANDTIIPVGNTLDADIVDLSP 563
+ +TW V + GY V + Q + + DT P + IV SP
Sbjct: 716 ELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDT--PRYVFRNESIVPYSP 773
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
Y ++V ++N G+G S F EE
Sbjct: 774 ---YEVKVGVYNNKGEGPFSPVTTVFSAEEE 801
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I + + NG ++I+P D+G Y C
Sbjct: 42 EDKKITLNCEARGNPLPHYRWQLNGSDIDTNTEHRYKLNGGNLVVINPNRNWDAGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLDNFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYMCVVTSMV 202
>gi|301612220|ref|XP_002935618.1| PREDICTED: contactin-5-like [Xenopus (Silurana) tropicalis]
Length = 1097
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 187/619 (30%), Positives = 298/619 (48%), Gaps = 28/619 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V + C P A+PKP W K + R + +G+L I S+ D G Y+C
Sbjct: 493 KGKEVVLECKPSASPKPSISWMKGEKAVRQNKRVAVLPDGSLRILNASKSDEGRYTCRGE 552
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G+ E + V P+ E P + + ++ L C A + LLDV++ W NG
Sbjct: 553 NIFGLAEIVASVFVTE-PTKIELTPKRTELTVGESIVLSCKAIHDPLLDVSFSWILNGQP 611
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
+ + E+ L I N AG Y C V++T +S + V+V GPPG
Sbjct: 612 VSFEKEDGHFESIRTQASSADLMIRNILLMHAGRYGCRVQTTADTVSDEAEVLVRGPPGP 671
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +++AT+ W+ GA N PI Y + AR+ ++ W + + G
Sbjct: 672 PGVVIVEEITESTATLSWSPGAENHSPILCYNLQARSPFSLGW-----QTVKTVPEIING 726
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS PS T P P+ + GG G+
Sbjct: 727 EMESAMVVDLNPWVEYEFRVVATNSIGTGDPSVPSRVIRTKEAVPKTPPANVSGGSGRRH 786
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N+T E + + + R S T +
Sbjct: 787 ELVITWEPVSEEFQNGEGFGYIVAFR-PNNTRGWKEKMVTSSDASKFIYRDESTPPLTPF 845
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V G +++ I V W P ++EN+
Sbjct: 846 EVKVGVYNNKGDGPFSDIVFICSAEGEPTTAPADVKGTGLSASEIVVAWKP---MKENL- 901
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
G+ +G+ + YWK+ EE + + + ++ L +T Y++ V AYN AG GP S
Sbjct: 902 GKSLGYEVSYWKDMEQEEASEKVKTAGNESSVILTDLDGNTLYHITVRAYNKAGYGPPSA 961
Query: 483 RYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + PS +K I N + V + W V E ++GYKV + +
Sbjct: 962 AVRAGTKKSPPSQVPSI--LKWIRNGSHVSLGWEAVRSLANESDVMGYKVML----RQEG 1015
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKEF 597
+N +I T ++ L Y + V A S GGDG SS P+ + G+
Sbjct: 1016 HSNSQVIQTQKT--NAVILLPDAGFYIIDVRAVSEGGDGIASSQIRVPSFS---GKITSA 1070
Query: 598 KSGSPALYSASTTLLLVMS 616
++ + + +AS++L+++++
Sbjct: 1071 QTSTHCISAASSSLIVLLA 1089
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 144/628 (22%), Positives = 249/628 (39%), Gaps = 93/628 (14%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C EA P+P + W K+G + R ++ NG L I V++ D+G+Y C A N++G+
Sbjct: 409 CKAEAKPRPIYRWLKNGLPLMPQNRIEMV-NGMLTIHNVNQSDAGMYQCLAENIYGIIYG 467
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL +E Q + I + + L C ++++ VR N +
Sbjct: 468 SAELKVLASAPTFELSQKQKTVVITKGKEVVLECKPSASPKPSISWMKGEKAVR-QNKRV 526
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG-------- 181
L P+ G L I NAS +D G Y C ++ G +V V P
Sbjct: 527 AVL--PD-----GSLRILNASKSDEGRYTCRGENIFGLAEIVASVFVTEPTKIELTPKRT 579
Query: 182 -LPGGVQVVEVHKT------SATIQWTDGATNGRPIT------HYKIIARTNWNSTWFNV 228
L G +V K + W NG+P++ H++ I RT +S +
Sbjct: 580 ELTVGESIVLSCKAIHDPLLDVSFSWI---LNGQPVSFEKEDGHFESI-RTQASSADLMI 635
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+++ RY R + + + V + E +V+ G P P +
Sbjct: 636 -RNILLMHAGRYGCRVQTTADTV-----SDEAEVLV-----RGPPGPPGVVIVEEITE-- 682
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 347
++SW P + ++P + Y + R +Q+ +T+ E N
Sbjct: 683 -------------STATLSWS--PGAENHSPILCYNLQARSPFSLGWQTVKTVPEIINGE 727
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + EYE +V A N +G G P I + E +P+ P V
Sbjct: 728 MESAMVVDLNPWVEYEFRVVATNSIGTGDPSVPSRVIRTKEAVPKTPPANVSGGSGRRHE 787
Query: 407 INVTWNPIELIRENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALI 456
+ +TW P+ +N G G+ + + WKE + + + Y +T
Sbjct: 788 LVITWEPVSEEFQN--GEGFGYIVAFRPNNTRGWKEKMVTSSDASKFIYRDEST------ 839
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
P T + VKV YNN G+GP S+ + P P+ V G++ + + V W+
Sbjct: 840 ---PPLTPFEVKVGVYNNKGDGPFSDIVFICSAEGEPTTAPADVKGTGLSASEIVVAWKP 896
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ + + +GY+V W+ D + A++ + GN + DL YH+ V A++
Sbjct: 897 MKENLGKS--LGYEVSYWK-DMEQEEASEKVKTAGNESSVILTDLDGNTLYHITVRAYNK 953
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGSPAL 604
G G P+ + G +K S P++
Sbjct: 954 AGYG---PPSAAVRAGTKKSPPSQVPSI 978
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W+K I S R + + L I V +D+G Y C
Sbjct: 310 AAQGTTVKMECFALGNPVPTISWRKVSGFIPSKARLRKAQ-AVLEIPNVQLEDAGTYECK 368
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E++ + QLR E Y W NG
Sbjct: 369 AENSRGKNAFRGQLQVYTQPQWIEKINDTQLDSGD---QLRWECKAEAKPRPIYRWLKNG 425
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + M N +E N G+L I N + +DAG Y+C+ ++ G I S + V+ P
Sbjct: 426 LPL--MPQNRIEMVN-----GMLTIHNVNQSDAGMYQCLAENIYGIIYGSAELKVLASAP 478
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 11/161 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + W ++G I R +GN +IS P DSG Y C A N
Sbjct: 117 VALNCEARGVPTPIYRWLRNGTEIDLENDYRYSMIDGNFIISSPNEMKDSGQYQCLAANS 176
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ ++ +++ + + L CS H+ EL+ Y W N
Sbjct: 177 FGSILSREATLQFAYLGNFSGRIRSAVSVREGQGVVLMCSPPHHSPELI---YSWVFNEF 233
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ E I+ G L I+ A +D G Y C+VK+
Sbjct: 234 ---PSFVAEDSRRFISQQTGNLYISKAQASDVGSYICLVKN 271
>gi|301760361|ref|XP_002915991.1| PREDICTED: contactin-6-like [Ailuropoda melanoleuca]
Length = 1028
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L+V + P K+ + ++ L C + ++V +IW+ NG I
Sbjct: 484 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G+ N PI + I ART ++ W + + +
Sbjct: 600 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILS 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ AP+G + F+++ + V+W I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGAG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG--EEKE 596
+ I+ NT +V + Y + + S+GGDG S +M +
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRG 1001
Query: 597 FKSGSPALYSASTTLLLVMSST 618
+ P++Y S ++ +T
Sbjct: 1002 IPALEPSIYFLSVVIIFYCFTT 1023
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + ++ + C P P W++ DGN + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWRRLDGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLFWECKASGKP--NPLYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLVITMLNVSDSGVYQCAAEN 390
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPLYTWLKNGERLNPEERIQI-ENGTLVITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 398 NAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISW-------KRGMESL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
+ + ++ DG L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 451 RQSKRVFLSEDGS-LKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITIPP 506
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I + + GNL IS P + D G+Y C ATN
Sbjct: 46 IILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDGGNLAISSPHTDQDIGMYQCLATNT 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D+ Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVVLLC-GPPPHFGDLFYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>gi|426249271|ref|XP_004018373.1| PREDICTED: contactin-3 [Ovis aries]
Length = 1028
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 278/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK I+ R +G L I V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQESERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G LIV P+ P + ++ ++ L C + LLD + W NG
Sbjct: 484 QFGKANGTTHLIVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDTIFTWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V A+N+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEESSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L W + G +
Sbjct: 398 SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS----W-----KKGEV 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + ADAG Y C+ ++ GK + T +IV P
Sbjct: 449 IVQESERTSFLNDGG-LKIVNVTKADAGIYTCIAENQFGKANGTTHLIVTEP 499
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKVKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVMNPNRNWDTGNYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSAV 202
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L I+ V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T+ D G L + P Q P + A ++L C A
Sbjct: 196 CVVTSAVTNDRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N D+G YEC+ +++ GK
Sbjct: 256 VPQINWRRSDGLPFSSKVKLRKF--------SGVLEIPNFQQEDSGSYECIAENSRGK 305
>gi|317418925|emb|CBN80963.1| Contactin-4 [Dicentrarchus labrax]
Length = 1031
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/584 (30%), Positives = 278/584 (47%), Gaps = 25/584 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V + C P A+P+ W + G ++ R+ I E+G L I+ +S+ D G Y+C A N
Sbjct: 429 GGEVVLECRPHASPRATISWWRGGELLKDSKRQTIMEDGTLRITNISKSDGGRYTCVARN 488
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + ++L L C ++ L + W NG I
Sbjct: 489 HFGTSSSTGTLVVKE-PTRIIVPPLSLDATVGQSLVLPCEVSSDSSLSPIFKWFFNGKAI 547
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
E G L+ + N +G+Y C+V + V +S +IV GPPG P
Sbjct: 548 DFSRQEHFEMIGGGFAGDLM-VRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPPGAPE 606
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
G+ V ++ T+ + W G N P+T Y + ART ++ W + D G+
Sbjct: 607 GLVVTDITDTTVQLSWGSGPDNHSPVTMYMVQARTPFSIGW-----QTVRTVPDSVPGQM 661
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ L PW YEF+V+A N +G GEPS+PS Q T A P AP + GGGG G+L
Sbjct: 662 MHATVKDLNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPVSVSGGGGARGEL 721
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I WEP+P E+Q+ + Y + +R + + +T+ + + R S +++EV
Sbjct: 722 VIMWEPVPEEQQSGEDFGYVVAFRPLGSSTW-IQTVLASPDASRYIYRNDSIAPLSQFEV 780
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KV N VG G S VVT+FSA++ P AP V++R +++ I V W PI + +
Sbjct: 781 KVGVYNSVGEGRFSRVVTVFSADEEPSEAPSRVWARAVSASEIEVYWEPIP--PGSSTEK 838
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+I + + +W++ + + A R N AL+ GL+ T Y + V A N+AG GP S +
Sbjct: 839 IIAYEVLFWEKGSRQSEAERV--RIINNTALLSGLKGSTVYLISVRAQNSAGLGPCSPPF 896
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV---RVWEVDQDMS 541
T + P +PP + N + + + W +V E + GYKV + W +
Sbjct: 897 NITTKKPPPSQPPGNIEWNLTN-SKIFLNWEHVKAMENESEVTGYKVVYRQNWNGKTTVL 955
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
N T + + + G+ Y + + A + GGDG S P
Sbjct: 956 ETNKTSVE---------LQIPSGEDYLIEIKALTEGGDGTSSGP 990
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
N+ C P+ + W K+G + + GR + E G L IS +S DSG+Y C A N
Sbjct: 338 ANLQWECKAIGKPRATYKWLKNGQPLTAEGRIHV-EAGRLTISRISLLDSGMYQCVADNE 396
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 123
G + L V+ P + + P K + R + L C H ++ W G
Sbjct: 397 QGAVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRATIS--WWRGGEL 454
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ + + ++ G L ITN S +D G Y CV ++ G S+ T++V+ P
Sbjct: 455 LKDSKRQTI------MEDGTLRITNISKSDGGRYTCVARNHFGTSSSTGTLVVKEP 504
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR-DDSGIY 58
+ +G +V + C P P W++ DGN + G+ KI + +L P R +D+G+Y
Sbjct: 241 HVSKGSSVKLECFALGNPVPSISWRRADGNPLP--GKIKINHSSGVLEIPYFRPEDAGVY 298
Query: 59 SCTATNVHGMDESKGRLIVLHGPS-YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
C A N G + ++G+L+ + ++ Q +A NLQ C A + Y W
Sbjct: 299 ECIAENSRGRNVARGQLLFHNVEQLHWVQTLKDAHMAIDANLQWECKAIGKP--RATYKW 356
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IV 176
NG + I+++ G L I+ S D+G Y+CV + G + + +V
Sbjct: 357 LKNGQPL-------TAEGRIHVEAGRLTISRISLLDSGMYQCVADNEQGAVYASAELKVV 409
Query: 177 EGPP 180
PP
Sbjct: 410 ASPP 413
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 14/178 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLI-SPVSRDDSGIYSCTATN 64
V I C + P P + WK DG I + GNLLI +P + G+Y C ATN
Sbjct: 48 QVFINCKAKGNPPPHYRWKVDGREINTESDPNYNLVEGNLLINNPHVINHGGVYQCIATN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCS--AHTEELLDVAYIWTHNG 121
G S+ + + + P +++ + + L C H E + Y W NG
Sbjct: 108 TFGTVVSREAKVQFAFLQNFSRKPRNTVSVREGQAVVLLCGPPPHYGE---IKYSWVFNG 164
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIV 176
R L + I+ G L I +D G Y CVV++ + S+ T V+V
Sbjct: 165 QR---SFLRQDARRFISQRTGNLYIAKVEASDVGNYTCVVRNMMTNATVFSSPTPVVV 219
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 28/228 (12%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYS 59
EG V + C P + K+ W +G + + RR I + GNL I+ V D G Y+
Sbjct: 139 EGQAVVLLCGPPPHYGEIKYSWVFNGQRSFLRQDARRFISQRTGNLYIAKVEASDVGNYT 198
Query: 60 CTATNVHGMDESK----------GRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCSAHT 107
C N+ M + R +V+ + P Q P + ++ +++L C A
Sbjct: 199 CVVRNM--MTNATVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVSKGSSVKLECFALG 256
Query: 108 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ +++ G + +N G+LEI DAG YEC+ +++ G+
Sbjct: 257 NPVPSISWRRADGNPLPGKIKINH--------SSGVLEIPYFRPEDAGVYECIAENSRGR 308
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYK 214
+ ++ L + + H A +QW A G+P YK
Sbjct: 309 NVARGQLLFHNVEQLHWVQTLKDAHMAIDANLQWECKAI-GKPRATYK 355
>gi|281346449|gb|EFB22033.1| hypothetical protein PANDA_004018 [Ailuropoda melanoleuca]
Length = 979
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 284/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++TI C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 407 GGDITIECKPNAFPRATISWKRGMESLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCIATN 466
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ ++ G L+V + P K+ + ++ L C + ++V +IW+ NG I
Sbjct: 467 QFGVAKNTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI 525
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C VK+T+ +S +IV GPPG
Sbjct: 526 ---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPG 582
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G+ N PI + I ART ++ W + + +
Sbjct: 583 PPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGW-----QAVSTVPEILS 637
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ I GGGG
Sbjct: 638 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSR 697
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I R T + E + + V R S +
Sbjct: 698 SELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSP 756
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ AP+G + F+++ + V+W I R
Sbjct: 757 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNT- 815
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 816 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGAG 871
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 872 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 930
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 931 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 969
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + ++ + C P P W++ DGN + G+ K ++ +L P ++D G Y
Sbjct: 222 AAKDSSIKLECFALGNPVPDISWRRLDGNPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 279
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 280 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLFWECKASGKP--NPLYTWLK 336
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 337 NGER-----LNPEE--RIQIENGTLVITMLNVSDSGVYQCAAEN 373
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 322 CKASGKPNPLYTWLKNGERLNPEERIQI-ENGTLVITMLNVSDSGVYQCAAENKYQIIYA 380
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL + + P K + ++ + C + +++ + G L
Sbjct: 381 NAELRVLASAPDFSKNPIKKNSVVQVGGDITIECKPNAFPRATISW-------KRGMESL 433
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
+ + ++ DG L+I N + +DAG Y C+ V G + K ++ PP
Sbjct: 434 RQSKRVFLSEDGS-LKIYNVTRSDAGSYTCIATNQFGVAKNTGSLVVKERTVITIPP 489
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G I + + GNL IS P + D G+Y C ATN
Sbjct: 29 IILNCAASGYPSPHYRWKQNGTDIDFTMSYHYRLDGGNLAISSPHTDQDIGMYQCLATNT 88
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D+ Y WT N
Sbjct: 89 LGTILSRKAKLQFAYIEDFETKTRSAVSVREGQGVVLLC-GPPPHFGDLFYAWTFND--- 144
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 145 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 194
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 119 EGQGVVLLC----GPPPHFGDLFYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 174
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 175 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 234
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 235 LGNPVPDISWRRLDGNPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIAGNLR 286
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 287 GRNLAKGQLIFYAPP 301
>gi|224066635|ref|XP_002186834.1| PREDICTED: contactin-6 [Taeniopygia guttata]
Length = 1022
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 280/581 (48%), Gaps = 20/581 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG VTI C P A+P+ W+K ++ R E+G+L IS +S+ D+G+Y+C ATN
Sbjct: 407 GGQVTIGCKPSASPRAVVSWRKGLEVLRQNKRVVFLEDGSLRISNISKVDAGVYTCVATN 466
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
G + G LIV +PP T A ++ L C + LDV + W+ NG R
Sbjct: 467 QFGTARNSGNLIVKE--RTVITIPPSDTDATVGESIVLPCQVSHDPSLDVLFSWSFNGQR 524
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I ++ ++ E G L+ I N +G+Y C+V++++ S +IV GPPG
Sbjct: 525 IDLSIGIHHFERIGRESAGDLM-IRNIQLHHSGKYVCMVQTSLDSQSAAADIIVRGPPGP 583
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
P V+V V T+A + W G N P+ Y + RT ++ W + + G
Sbjct: 584 PEDVKVEHVSSTTAGLSWKPGVDNNSPVQIYSVQTRTPFSVGW-----QAVATAPEVING 638
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
R + L PW YEF+V+A N +G GEPS PS T A P AP+ I GGGG
Sbjct: 639 RTHKATVVDLSPWVEYEFRVVASNSVGIGEPSRPSALLRTKAAVPVVAPTNISGGGGSRS 698
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R T + + + V R S + +
Sbjct: 699 ELVITWEPVSEELQNGEGFGYIVMFRPLGSTTWTKAVVASVESSKY-VYRNESITPLSPF 757
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G G S + I+S ED PQ+AP G + ++ A+ V+W PI R
Sbjct: 758 EVKVGVYNNEGEGTLSSISIIYSGEDEPQMAPAGASALSVSAAAVEVSWLPIPWNRHT-- 815
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR++G+ + YW +D E TA I GL+ +T Y+ V AYN AG GP S
Sbjct: 816 GRVLGYEVLYWIDDPKESTAGKVRVSGNVTAKNITGLRANTVYFATVRAYNTAGTGPSST 875
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P +PP+ + K N + + W +V E ++GYK+ + Q S+
Sbjct: 876 PVNVTTKKSPPSQPPANIAWKLTN-SKFCLNWEHVKTMENESEVLGYKILYRQNRQ--SK 932
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
A+ I+ NT +V + Y + + S+GGDG S
Sbjct: 933 AH--ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 969
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGI 57
YA +G +V + C P P WK+ GS +KI N G L I V ++D G
Sbjct: 221 YAAKGSSVRLECFALGNPVPSISWKRSD---GSSLAKKIQHNRAGGVLEIPNVEQEDEGS 277
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A N G++ ++G+L+V P + +++ ++ + +L C A + +Y W
Sbjct: 278 YECMAGNTRGINIARGQLLVYAPPEWDKKIQNAF-LSLYDSLFWECKARGKP--SPSYSW 334
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVI 175
NG + + I I+ G L I + +D+G Y+CV ++ I + + VI
Sbjct: 335 LKNGQPL-------MSEERIQIENGTLLIPMLNLSDSGLYQCVAENKYDTIYANAELRVI 387
Query: 176 VEGP 179
P
Sbjct: 388 AAAP 391
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + S R +I ENG LLI ++ DSG+Y C A N + +
Sbjct: 322 CKARGKPSPSYSWLKNGQPLMSEERIQI-ENGTLLIPMLNLSDSGLYQCVAENKYDTIYA 380
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + + SA ++ W R G +
Sbjct: 381 NAELRVIAAAPDFSRNPVKKLSVVQVGGQVTIGCKPSASPRAVVS----W-----RKG-L 430
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
++ + ++ G L I+N S DAG Y CV + G +IV+
Sbjct: 431 EVLRQNKRVVFLEDGSLRISNISKVDAGVYTCVATNQFGTARNSGNLIVK 480
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 22/191 (11%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVWKKDGNIIG--SGGRRKIFE-NGNLLISPVSRDDSGIYS 59
EG V + C P P + W + N + RR + + GNL ++ V D G Y+
Sbjct: 119 EGQGVVLLCGTPPRFPGLSYTWLFNNNTLDLREDSRRFVSQATGNLYLAKVEPWDVGNYT 178
Query: 60 CTATNVHGMDESKGR--LIVLHGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEE 109
C ++ G + L G + PKI + A +++L C A
Sbjct: 179 CAVSSAEARRRVWGTPTALTLRGDGVMGEYEPKIEVRFPETTYAAKGSSVRLECFALGNP 238
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ + + N GG+LEI N D G YEC+ +T G
Sbjct: 239 VPSISWKRSDGSSLAKKIQHNRA--------GGVLEIPNVEQEDEGSYECMAGNTRGINI 290
Query: 170 TKTTVIVEGPP 180
+ ++V PP
Sbjct: 291 ARGQLLVYAPP 301
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C + P P + WK++G I + G+L I+ P D G Y C ATN
Sbjct: 29 ILLNCTAKGYPLPYYRWKQNGTDIDLTMSYHYRLVGGSLAINNPHKNQDIGTYQCLATNS 88
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S+ + +E P +++ + + L C ++Y W N
Sbjct: 89 FGTILSRKAKLQFAYLENFETRPRSPVSVREGQGVVLLCGT-PPRFPGLSYTWLFNN--- 144
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+DL E ++ G L + D G Y C V S
Sbjct: 145 NTLDLREDSRRFVSQATGNLYLAKVEPWDVGNYTCAVSS 183
>gi|444727037|gb|ELW67545.1| Contactin-3 [Tupaia chinensis]
Length = 996
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 282/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R ++G L I+ V++ D+G Y+CTA N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGEVAVQEHERITFLKDGGLKIANVTKADTGSYTCTAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTLLVVTE-PTKITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKEGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D GR
Sbjct: 602 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSIQARTPFSVGWQTVT--TVPETID---GR 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ Y+
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSPYQ 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIKVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW + EE++ + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNDGGEEESSNKVKVAGNETSTRLQGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATETKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNMQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 147/655 (22%), Positives = 247/655 (37%), Gaps = 104/655 (15%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S +++ F NG L I +DD+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKQRKF-NGVLEIPNFQQDDAGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179
G + L E I I+ G + I+N + D+G ++C+ ++ G + S+ +V
Sbjct: 355 GEA---LVLEE----RIQIENGAITISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 407
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P V ++ D P A ++W V EH +R
Sbjct: 408 PDFSKNPMKKLVQVQVGSLVSLDCKPRASP------RALSSWKKGEVAVQEH------ER 455
Query: 240 YTGRKEASIENVLVPWS-TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
T K+ ++ V + T + A N+ +G+ + + T K APS +
Sbjct: 456 ITFLKDGGLKIANVTKADTGSYTCTAENQ--FGKANGTTLLVVTEPTKITLAPSNM---D 510
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWR--------KKNDTEFQSETLKEYGNVGIAV 350
+G+ I LP + Q+ P + W KK + F+ G++ I
Sbjct: 511 VSVGESVI----LPCQVQHDPLLDIMFTWYFNGALTDFKKEGSHFEKVGGSSSGDLMIRN 566
Query: 351 VRIP-SEFYYTEYEVKVQAINDVG-------PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
+++ S Y + V +++ PGP V +++ Q + G
Sbjct: 567 IQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENV----KVDEITDTTAQLSWKEGT 622
Query: 403 NS------------TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
++ T +V W + + E I GR
Sbjct: 623 DNHSPVISYSIQARTPFSVGWQTVTTVPETIDGR-------------------------- 656
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
+ A +V L P +Y +V+A N G G P RT P+ PPS V G + +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVD-----QDMSRANDTIIPVGNTLDADIVDLSPG 564
+ +TW V + GY V + Q + + DT P + I+ SP
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDT--PRYVFRNESIMPFSP- 773
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTL 619
Y ++V ++N G+G S F EE + S S++ + V +T+
Sbjct: 774 --YQVKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIKVSWNTI 826
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E VT+ C P P + W+ +G+ I S GNL++ +R+ D+G Y C
Sbjct: 42 EDKKVTLNCEARGNPSPHYRWQLNGSDIDMSLEHHYKLNGGNLVVFNPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVESSDVGNYTCVVTSTV 202
>gi|291392425|ref|XP_002712732.1| PREDICTED: contactin 1 [Oryctolagus cuniculus]
Length = 1076
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 294/597 (49%), Gaps = 31/597 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + +G R I+E+G+L I+ ++R D G+Y+C
Sbjct: 501 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRILIWEDGSLEINNITRSDGGVYTCF 560
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 561 AENNRGKANSTGTLVITD-PTRIILAPLNADITVGENATMQCAASFDSALDLTFVWSFNG 619
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 620 YVIDFNKENIHYQRNFMLDNNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 679
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ +V TS + W+ G+ N PI+ Y I +T + W + +
Sbjct: 680 GPPGGLRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTQLSDGWKDAK-----TDPPII 734
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 735 EGNMEAAKAVDLIPWMEYEFRVVATNTLGLGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 794
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + S T
Sbjct: 795 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDESMSPST 853
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI-ELIRE 419
++VKV+A N G GP S + I SA+D P AP V + +S+ I+V W + E I E
Sbjct: 854 AFQVKVKAFNSKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE 913
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
N ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 914 N-------YQIRYWAAHDKEAAAHRVQVSSQEYSARLENLLPDTQYFVEVGACNSAGCGP 966
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 967 SSDVIDTFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 1024
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
D + + I V D + Y + V A S+GGDG +S I+ + G
Sbjct: 1025 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKISGRAG 1072
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+G+Y C A+N
Sbjct: 134 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASN 193
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 194 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 250
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 251 EFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCFVSS 290
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 27/174 (15%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 427 CVATGKPIPTIRWLKNG---------YAYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 477
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH------NGVRIG 125
L +L +E P K I A + ++ + + W+ NG RI
Sbjct: 478 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRI- 536
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ + G LEI N + +D G Y C ++ GK ++ T+++ P
Sbjct: 537 -----------LIWEDGSLEINNITRSDGGVYTCFAENNRGKANSTGTLVITDP 579
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
YA G NVT+ C P P W+K + S +I +G +L I + +D G+Y
Sbjct: 327 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EISTSGAVLKIINIQLEDEGLYE 384
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G D+ + ++ V P + E + + +L C A + + + W
Sbjct: 385 CEAENIRGRDKHQAKIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTIR--WLK 441
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 442 NGYAYHR---------------GELRLYDVTFENAGMYQCIAENTHGAI 475
>gi|351705488|gb|EHB08407.1| Contactin-1 [Heterocephalus glaber]
Length = 1140
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 205/628 (32%), Positives = 317/628 (50%), Gaps = 30/628 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 507 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 566
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 567 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 625
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 626 YVIDFTKENIHYQRNFMLDANGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 685
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 686 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 741
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 742 -GNMEAARAVDLIPWMEYEFRVLATNTLGMGEPSIPSNRIKTDGAAPNVAPSDVGGGGGS 800
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 801 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGDEWKKVTVTN-PDTGRYVHKDETMSPST 859
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRE 419
++VKV+A N+ G GP S + I+SA+D P AP V + +S+ I+V W + +E I E
Sbjct: 860 AFQVKVKAFNNKGDGPYSLIAVIYSAQDAPNEAPTDVGVKVLSSSEISVHWKHVVEKIVE 919
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEG 478
+ ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG G
Sbjct: 920 S-------YQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVGACNSAGCG 971
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P SE +E RKAP P + + + ++W +V E + GYKV Q
Sbjct: 972 PPSE-VIETFTRKAPPSQPPRIISSVRSGSRYIISWDHVVALSNESSVTGYKVLYRPDGQ 1030
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
+ T ++++ V + +Y + V A S+GGDG +S I+ G E +
Sbjct: 1031 HEGKLYST---HKHSIE---VPIPRDGQYVVEVRAHSDGGDGVVSQVKIS---GVEDGKE 1081
Query: 599 SGSPALYSASTTLLLVMSSTLYIFVAFS 626
G+ + T V L +F+A+
Sbjct: 1082 EGASLVQIHCT--FAVRPPCLQVFLAYC 1107
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 46 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 105
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 106 NYGMVRSTEATLNF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 162
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 163 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 214
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 215 PLIPIPERTTKPYPADIVVQFKD 237
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 86/224 (38%), Gaps = 36/224 (16%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 239 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 290
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-------RNLQLRCSAH 106
D G+Y C A N+ G D+ + R+ V Y P I + +N+ L C A
Sbjct: 291 DEGLYECEAENIRGKDKHQARIYVQGTTKPY---PADIVVQFKDIYALMGQNVTLECFAL 347
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ D +R + T I+ G +L+I N D G YEC ++ G
Sbjct: 348 GNPVPD---------IRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRG 398
Query: 167 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
K + + V+ P + EV + + W AT G+PI
Sbjct: 399 KDKHQARIYVQAFPEWVEHINDTEV-DIGSDLYWPCVAT-GKPI 440
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 333 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 384
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 385 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 443
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 444 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 481
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 433 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 483
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 484 NAELKILALAPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 538
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 539 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 585
>gi|326679017|ref|XP_001340839.4| PREDICTED: contactin-3-like [Danio rerio]
Length = 991
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 284/586 (48%), Gaps = 24/586 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A P +W+K ++ R +G L ++ V++ D G Y+C
Sbjct: 389 AKTGSTVTMECKPQAFPSAITLWRKGNEVMQRTDRITFLPDGTLRLTNVTKMDGGNYACL 448
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + GRL+V P+ Q P + I ++ L C + LDV++ W NG
Sbjct: 449 ARNQFGTASTSGRLLVTD-PTQITQGPMDMEIIVGESIVLPCQISCDPALDVSFSWAFNG 507
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ +D E + G L+ I N AG+Y CVV + V +S +IV+GPPG
Sbjct: 508 QLLSKLD-QHYEHVGGSTSGDLM-IRNIQLKHAGKYVCVVDTDVESLSAAAILIVKGPPG 565
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P GV V E+ ++A + W G NG PIT Y I A+T + W V + + + +D
Sbjct: 566 APDGVTVEEITDSTAQLSWRPGQDNGSPITSYIIQAKTAFTVGWQAV--NTVPEVID--- 620
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G + L W +EF+V+A N +G GEPS S + T P AP+ +GGGGG
Sbjct: 621 GNTLTATVVDLNAWVEFEFRVLARNSVGVGEPSPASLKTRTEDAVPDTAPTDVGGGGGSK 680
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P + QN Y I +R + + + + V R S ++
Sbjct: 681 SELVITWEPVPEDLQNGDGFGYIIAFRPLGEVNW-THAVTSVPTQSRYVYRNESILPFSP 739
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+ VKV A N G GP S V +FSAE+ P P GV++R ++T I V+W+ + + E
Sbjct: 740 FSVKVGAYNTKGQGPFSPVTIVFSAENEPSGVPDGVWARSISATEIEVSWHILSVSTE-- 797
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
R++G+ + YW++D ET ++ I GL+ T+Y++ V A+N AG GP S
Sbjct: 798 --RVLGYEVVYWEDDTKPETMGKVRVSANQDKVNISGLRGYTQYFLTVSAFNTAGTGPLS 855
Query: 482 ERYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE-VDQD 539
T + P +PP V I + TVH W V E + GY+V ++
Sbjct: 856 PTINVTTKKSPPGQPPLNVEWNLIGSKLTVH--WEPVISLEMESDVTGYQVSYRRNRHKE 913
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
++ + V TL AD Y +++ A S+GG+G + P
Sbjct: 914 INTITTNLTSVELTLPAD-------DDYVIQIRALSDGGEGMPTEP 952
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 7/180 (3%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G ++ + R +I ENG L IS V+ D+G+Y C A N HG+
Sbjct: 307 CKANGKPKPSYSWLKNGELLAAEDRIQI-ENGALTISSVNLSDAGMYQCVAENKHGIIYF 365
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L+VL P + + P + + A + + +W R GN +
Sbjct: 366 GAELVVLASPPDFSRSPLRTLLKAKTGSTVTMECKPQAFPSAITLW-----RKGNEVMQR 420
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 191
+ D G L +TN + D G Y C+ ++ G ST ++V P + G +E+
Sbjct: 421 TDRITFLPD-GTLRLTNVTKMDGGNYACLARNQFGTASTSGRLLVTDPTQITQGPMDMEI 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G VT+ C P P+ W++ + + N L I ++D+G Y C
Sbjct: 207 AAKGSVVTLECFALGNPVPEITWRRANAVPFPSKVKMKNSNVVLEIPSFQQEDAGGYECV 266
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +GRL H + Q I ++ L C A+ + +Y W NG
Sbjct: 267 AENKMGKNTVQGRL-SFHAKPQWVQTMRDIALSIEERLFWECKANGKP--KPSYSWLKNG 323
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ D I I+ G L I++ + +DAG Y+CV ++ G I ++V P
Sbjct: 324 ELLAAED-------RIQIENGALTISSVNLSDAGMYQCVAENKHGIIYFGAELVVLASP 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVH 66
T+ C+ + P P++ W +G +I S R+ GNL+I + R D GIY CTA N H
Sbjct: 16 TLACDAKGIPAPQYRWSLNGTLINLSTDSRRRLSGGNLVIRSLDRAQDGGIYQCTAFNPH 75
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG----V 122
G S+ + + Q +++ + + L C + D+++ W N V
Sbjct: 76 GAILSRRASLQFAYLNLKTQTRSAVSVREGQGVVLLCGTPSYA-GDLSFAWVFNEYPYFV 134
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV--KSTVGKISTKTTVIVEGPP 180
+ N ET N L I +D G Y CVV + T GK+ + T +V
Sbjct: 135 QQDNRRFVSQETGN-------LYIAKVEPSDVGNYTCVVVNRITKGKVLSSPTPLVLRTD 187
Query: 181 GLPGGVQ-VVEVH 192
G+ G + +EVH
Sbjct: 188 GVMGEYEPKIEVH 200
>gi|432866112|ref|XP_004070704.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1029
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 288/599 (48%), Gaps = 31/599 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG+V + C P +P+ W+K I R + +NG+L +S V++ D+G+Y+C
Sbjct: 425 ARQGGDVLMECKPRMSPRGVISWRKGEEAIRESHRVTVLDNGSLRLSNVTKADAGVYTCV 484
Query: 62 ATNVHGMDESKGRL-----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
A N G+ S G L V+ P+ + + + ++ L C + LD+ +
Sbjct: 485 ARNQFGVASSAGSLSVKDATVITSPAGH------LDVTLGESIVLPCQVSHDPTLDLKFT 538
Query: 117 WTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W N + G E DGG++ I N AG+Y C V++ V IS T V
Sbjct: 539 WFFNEQLIHFGGRGAY-FEKAGGRSDGGIM-IRNIQLKHAGKYTCAVQTKVDSISIATDV 596
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
+V GPPG P QV+E+ +T+AT+ W G N PI Y I ART ++ W +
Sbjct: 597 VVRGPPGPPLDCQVIEMTETTATLSWRPGTDNHSPILSYTIQARTPFSLGW-----QAVT 651
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ G+K ++ L PW YEF+V+A N +G GEPS PS + T P P+R+
Sbjct: 652 TVPELPKGKKLSASVFELSPWVEYEFRVLATNSIGTGEPSKPSKKARTKETSPRVTPARV 711
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
GGGG +L I+WEP+P E Q+ P Y + +R + + + V +
Sbjct: 712 NGGGGGRSELVITWEPVPEELQSGPGFGYVVAFRPLGAPGWMQAAVTS-PDASKYVFKNE 770
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
S ++ Y+VKV N+ G GP S V ++SAE+ P AP + +R ++ I+V+W P+
Sbjct: 771 SIPPFSPYQVKVGVYNNKGEGPFSPVTILYSAEEEPTRAPTRLRARSISAAEIDVSWKPL 830
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
N R R++G+ + YW+E ++ A + + +I L+ + YY+ + AYN+
Sbjct: 831 PW--SNNRRRILGYELWYWREKQKQDAATVIRTVGNKTSVVIRDLEGSSTYYISLRAYNS 888
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
AG GP+S T + P + P + N + V + W V E + GYKV
Sbjct: 889 AGVGPQSSIVNVTTKKPPPSQAPVKIRWNTSN-SKVILRWDQVHALENESEVTGYKVL-- 945
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
QD + TL+ + L + Y +++ FS GG+G +SS IT E
Sbjct: 946 -YSQDKHSRPSVVETKNTTLE---LSLPVNEDYVIQIKPFSEGGEG-ISSHQITIPRSE 999
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +G L I ++ D G+Y C A N +G
Sbjct: 342 CKASGKPKPSYRWLKNGESLDPMEDRIEVNDGVLTIRSLNLVDVGMYQCVAENKYGRIFC 401
Query: 72 KGRLIVLH-GPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
+L VL P + + L T+A ++ + C +++ R G +
Sbjct: 402 NAQLRVLAIAPDFSQNLVKAQTLARQGGDVLMECKPRMSPRGVISW-------RKGEEAI 454
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG 181
E + +D G L ++N + ADAG Y CV V S+ G +S K ++ P G
Sbjct: 455 RESHRVTV-LDNGSLRLSNVTKADAGVYTCVARNQFGVASSAGSLSVKDATVITSPAG 511
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 17/172 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFEN---GNLLISPVSRDDSG 56
+ V + C P PK W++ D G RK+ N G L I ++++G
Sbjct: 241 HVANSSTVKLECFALGNPVPKISWRRLDDAPFG----RKVKVNEAFGVLEIPYFQQENAG 296
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
IY C A N G + +G+L P + P + + C A + +Y
Sbjct: 297 IYECLAENSRGRNSVRGKLTFYASPQLIVK-PQDVQKTIDDTVVWECKASGKP--KPSYR 353
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + M+ I ++ G+L I + + D G Y+CV ++ G+I
Sbjct: 354 WLKNGESLDPME------DRIEVNDGVLTIRSLNLVDVGMYQCVAENKYGRI 399
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 3 GEGGNVTIF-CNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYS 59
GE +F C + P P + WK D I + G R GNL I ++++ D+G+Y
Sbjct: 43 GESRKEVVFSCEAQGQPAPFYRWKLNDSYIHPNPGSRFSLMGGNLHIRHLNKEEDTGVYQ 102
Query: 60 CTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYI 116
C A+N G S+ L V + ++ Q + + + + L C H+ EL +
Sbjct: 103 CLASNSFGTIVSREANLHVAYLENFKTQRRSPVRVREGQGVVLLCGPPPHSGEL---TFR 159
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
W N + L ++ G L I +D G Y CVV +TV K S V
Sbjct: 160 WIFNDDPSSIVQDTRL---FVSQKTGNLYIAKVEPSDVGNYTCVVTNTVTKSS------V 210
Query: 177 EGPP 180
GPP
Sbjct: 211 RGPP 214
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + C P ++++ D + I R + + GNL I+ V D G Y+
Sbjct: 139 EGQGVVLLCGPPPHSGELTFRWIFNDDPSSIVQDTRLFVSQKTGNLYIAKVEPSDVGNYT 198
Query: 60 CTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G +VL P Q P I +A ++L C A
Sbjct: 199 CVVTNTVTKSSVRGPPTPLVLRADGVMGEYEPKIEVQFPEVIHVANSSTVKLECFALGNP 258
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ + + +NE G+LEI +AG YEC+ +++ G+ S
Sbjct: 259 VPKISWRRLDDAPFGRKVKVNEA--------FGVLEIPYFQQENAGIYECLAENSRGRNS 310
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYK 214
+ + P L V+ +V KT T+ W A+ G+P Y+
Sbjct: 311 VRGKLTFYASPQLI--VKPQDVQKTIDDTVVWECKAS-GKPKPSYR 353
>gi|395815721|ref|XP_003781372.1| PREDICTED: contactin-5 [Otolemur garnettii]
Length = 1110
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 194/619 (31%), Positives = 291/619 (47%), Gaps = 25/619 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 505 KGREVVIECKPQGSPKPIISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCRGE 564
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G E + V P+ E P + + ++ L C A + LDV + WT G
Sbjct: 565 NIFGSAEIIASVSVKE-PTKIELTPKRTELTVGESVVLSCKAIHDSSLDVTFYWTLKGQP 623
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I D E L I N AG Y C V++T +S + ++V GPPG
Sbjct: 624 IDFEKDGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 683
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 684 PGVVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITG 738
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 739 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRVIRTNEAVPKTAPTNVSGRSGRRH 798
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 799 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 857
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + G + + I V W + ++E++
Sbjct: 858 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATGVSVSEILVAW---KHVKESL- 913
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ E++A +R + ++ GL+ +T+Y++ V AYN AG GP S
Sbjct: 914 GRPQGFEVGYWKDTEQEDSAETVKTRGNDSSIILTGLEGNTRYHLTVRAYNGAGYGPPSG 973
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
+ T R P + P + + + + V + W V P E ++GYKV + S+
Sbjct: 974 QVSATTKRSPPSQAPGNLQWEQ-HGSQVSLGWEPVVPLANESEVVGYKVFYRQEGHSSSQ 1032
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 602
+T P +V L Y + V A S GGDG SS I + S
Sbjct: 1033 VIETQKPQA------VVPLPDAGVYIIEVRACSEGGDGTASS-QIRVPSYSGGKITSAQS 1085
Query: 603 ALYSAST-----TLLLVMS 616
AL++ ST TLLL ++
Sbjct: 1086 ALHTFSTSSPSVTLLLALT 1104
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+G Y C
Sbjct: 322 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGFYECR 380
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 381 AENSRGKNSFRGQLQVYTYPHWLEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 437
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
E+ +N G+L I + + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 438 APYSPQSRVEM----VN---GVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAP 490
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 129 VALNCEVRGNPIPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNS 188
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 189 FGSVLSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 245
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 246 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 285
>gi|149728474|ref|XP_001493497.1| PREDICTED: contactin-3 [Equus caballus]
Length = 1026
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 182/580 (31%), Positives = 278/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK I+ R + G L I+ V++ D G Y+C A N
Sbjct: 422 GSVVSLDCKPRASPRALSSWKKGDAIVQENERISFLKGGGLKIANVTKADVGTYTCIAEN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 482 QFGKANGTTYLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGALT 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 541 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 599
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 600 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GK 654
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 655 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 714
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 715 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIMPFSLYE 773
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN + N G
Sbjct: 774 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNAVPWKLSN--G 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE + A + GL+ + YY V AYN+AG GP S+
Sbjct: 832 HLLGYEVRYWNNGGEEELSSKVKVAGNETSARLRGLKSNLAYYTAVRAYNSAGTGPFSDT 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q +
Sbjct: 892 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQSNVQV 950
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 951 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 984
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 337 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 395
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K I + + L C ++ + G+ +
Sbjct: 396 SAELKVVAAAPDFSKTPMKKLIQVQVGSVVSLDCKPRASPRALSSW-------KKGDAIV 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E + + GG L+I N + AD G Y C+ ++ GK + T ++V P
Sbjct: 449 QENERISF-LKGGGLKIANVTKADVGTYTCIAENQFGKANGTTYLVVTEP 497
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 237 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKSRKF-NGVLEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + IA NL C A + +Y W N
Sbjct: 296 LAENSRGKNVARGRLTYYAKP-HWVQLIKDVEIAVEDNLYWECRASGKP--KPSYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 353 GEA---LVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVAAA 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E VT+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 40 EDKKVTLNCEARGNPSPHYRWQLNGSDINLSMEYRYKLNGGNLVVLNPNRNWDTGSYQCF 99
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 100 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 156
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 157 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 200
>gi|449269777|gb|EMC80528.1| Contactin-5, partial [Columba livia]
Length = 985
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 281/586 (47%), Gaps = 22/586 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+A+PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 380 KGQEVVIECKPQASPKPTITWKKGDKALRENKRITILPHGSLRILNASKSDEGRYLCQGV 439
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P KI + ++ L C A + LDV + WT NG
Sbjct: 440 NVFGSAEIIASVSVKE-PTRMELTPKKIELMVGESVVLSCKALHDSTLDVTFYWTLNGQP 498
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++ +S +T ++V GPPG
Sbjct: 499 IDFEKEGGHFESIKAQASSADLMIRNILLTHAGRYGCRVQTAADTVSDETELLVRGPPGP 558
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ T+AT+ W+ GA N PI+ Y + AR+ ++ W + + +G
Sbjct: 559 PGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPEVISG 613
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N++G G+PS+PS T P P+ + G G+
Sbjct: 614 DMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRH 673
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 674 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 732
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 733 EVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW---KHIKESL- 788
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ EE A + + L+ GL+ +T Y++ V AYN AG GP S
Sbjct: 789 GRPQGFEVGYWKDMEQEEAAEKVKTEGNESSILLTGLEGNTLYHLTVRAYNAAGYGPPSS 848
Query: 483 RYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + PS + I+ + + V + W V P E ++GYKV + Q
Sbjct: 849 AVRAATKKSPPSQAPSNIMWIQ--DGSHVSLGWEPVRPLANESDVMGYKVLFRQEGQ--- 903
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+N +I T + +V L Y + V A S GGDG +SP I
Sbjct: 904 -SNSQVIETQKT--SAVVLLPDAGVYIIEVCAVSEGGDG-TASPQI 945
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
V + C P P W+K +G+ RK L I V +D+G+Y C A N
Sbjct: 203 VNMECFALGNPVPTISWRKVNGHNPSKARLRK--SQAVLEIPNVQLEDAGVYECKAENSR 260
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + +G+L V P + E+L + + L+ C A + Y W NGV +
Sbjct: 261 GRNVFRGQLQVYTYPHWVEKL-NDTQLDSGDQLRWECKATGKP--RPTYRWLKNGVPLWP 317
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
I + G+L I + + +DAG Y+C+ ++ G I + I+ P P
Sbjct: 318 QS-------RIEMVNGVLMIHSVNLSDAGMYQCLAENKYGTIYASAELKILASAPTFP 368
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 61/164 (37%), Gaps = 26/164 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V++ C P P + W ++G I S R + E ++ P DSG Y C
Sbjct: 24 EEKKVSLNCQARGNPTPTYRWLRNGTEIDIESDYRFSLIEGSLIIKDPSEMKDSGQYQCL 83
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+N+ G S+ ++ CS E ++ Y W N
Sbjct: 84 TSNMFGTILSREAVL---------------------QFACECSVLESEGSEIIYSWVFNE 122
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 123 F---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 163
>gi|148693018|gb|EDL24965.1| mCG142130 [Mus musculus]
Length = 1007
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 407 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 466
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 467 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 525
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 526 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 585
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 586 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 640
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 641 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 700
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 701 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 759
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 760 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 815
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 816 GFEISYWKDTEPEDSVETVRTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 875
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 876 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 934
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 935 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 987
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 988 LSKWSSVTLLLAL 1000
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 220 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 278
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 279 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 335
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 336 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 388
Query: 181 GL 182
Sbjct: 389 SF 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 319 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 377
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 378 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 430
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I DG L I NAS AD G+Y C + G ++ V+ P
Sbjct: 431 RANKRIAILPDGS-LRILNASKADEGKYICQGVNIFGSAEIIASLSVKEP 479
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 27 VALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLATNS 86
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 87 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 143
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 144 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 183
>gi|74184167|dbj|BAE37085.1| unnamed protein product [Mus musculus]
Length = 893
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 293 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 352
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 353 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 411
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 412 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 471
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 472 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 526
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 527 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 586
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 587 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 645
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 646 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 701
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 702 GFEISYWKDTEPEDSVETARTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 761
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 762 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 820
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 821 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 873
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 874 LSKWSSVTLLLAL 886
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYGCT 164
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 165 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 221
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 222 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 274
Query: 181 GL 182
Sbjct: 275 SF 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 205 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 263
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 264 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 316
Query: 130 NELETPNINIDGGLLEITNASFADAGEYEC 159
+ I DG L I NAS AD G+Y C
Sbjct: 317 RANKRIAILPDGS-LRILNASKADEGKYIC 345
>gi|283046667|ref|NP_001028531.2| contactin-5 isoform 2 precursor [Mus musculus]
Length = 893
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 293 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 352
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 353 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 411
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 412 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 471
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 472 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 526
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 527 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 586
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 587 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 645
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 646 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 701
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 702 GFEISYWKDTEPEDSVETVRTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 761
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 762 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 820
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 821 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 873
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 874 LSKWSSVTLLLAL 886
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 164
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 165 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 221
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 222 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 274
Query: 181 GL 182
Sbjct: 275 SF 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 205 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 263
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 264 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 316
Query: 130 NELETPNINIDGGLLEITNASFADAGEYEC 159
+ I DG L I NAS AD G+Y C
Sbjct: 317 RANKRIAILPDGS-LRILNASKADEGKYIC 345
>gi|282847346|ref|NP_001164258.1| contactin-5 isoform 1 precursor [Mus musculus]
gi|341940370|sp|P68500.2|CNTN5_MOUSE RecName: Full=Contactin-5; AltName: Full=Neural recognition molecule
NB-2; Flags: Precursor
Length = 1098
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 498 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 557
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 558 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 616
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 617 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 676
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 677 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 731
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 732 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 791
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 792 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 850
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 851 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 906
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 907 GFEISYWKDTEPEDSVETVRTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 966
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 967 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 1025
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 1026 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 1078
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 1079 LSKWSSVTLLLAL 1091
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 311 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 369
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 370 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 426
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 427 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 479
Query: 181 GL 182
Sbjct: 480 SF 481
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 410 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 468
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 469 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 521
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I DG L I NAS AD G+Y C + G ++ V+ P
Sbjct: 522 RANKRIAILPDGS-LRILNASKADEGKYICQGVNIFGSAEIIASLSVKEP 570
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 118 VALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLATNS 177
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 178 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 234
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 235 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 274
>gi|74209635|dbj|BAE23567.1| unnamed protein product [Mus musculus]
Length = 893
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 293 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 352
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 353 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFG 411
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 412 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 471
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 472 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 526
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 527 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 586
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 587 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 645
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 646 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 701
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 702 GFEISYWKDTEPEDSVETARTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 761
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 762 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 820
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 821 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 873
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 874 LSKWSSVTLLLAL 886
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 106 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYGCT 164
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 165 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 221
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 222 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 274
Query: 181 GL 182
Sbjct: 275 SF 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 205 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 263
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 264 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 316
Query: 130 NELETPNINIDGGLLEITNASFADAGEYEC 159
+ I DG L I NAS AD G+Y C
Sbjct: 317 RANKRIAILPDGS-LRILNASKADEGKYIC 345
>gi|410951585|ref|XP_003982475.1| PREDICTED: contactin-3 [Felis catus]
Length = 1029
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 281/580 (48%), Gaps = 19/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+PK WK+ I+ R ++G L I V++ D G Y+C A N
Sbjct: 424 GSMVSLDCKPRASPKALRSWKRGDVIVQENERISFLKDGGLQIVNVTKADVGTYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGTLT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEIID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESIVPFSLYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW + EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWN-NGEEESSSKVKVAGNETSARLRGLKSNVAYYTAVRAYNSAGAGPFSTT 892
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 893 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNSVQV 951
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 952 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 985
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + +L + A + L W + G++
Sbjct: 398 SAELKVIASAPDFSKTPMKKLLQVQVGSMVSLDCKPRASPKALRS----W-----KRGDV 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + AD G Y C+ ++ GK + T ++V P
Sbjct: 449 IVQENERISFLKDGG-LQIVNVTKADVGTYTCIAENQFGKANGTTRLVVTEP 499
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 240 AKGATVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDTGSYECV 298
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL P ++ QL + IA NL C A + +Y W NG
Sbjct: 299 AENSRGRNVARGRLTYYAKP-HWVQLIRDVEIAVEDNLFWECRASGKP--KPSYRWLKNG 355
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L E I I+ G L I+N + D+G ++C+ ++ G I S + VI P
Sbjct: 356 ---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVIASAP 408
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDINPSMEYRYKLNGGNLVVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMV 202
>gi|403269328|ref|XP_003926701.1| PREDICTED: contactin-1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1018
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDREEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+R T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDRIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 400
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|403269330|ref|XP_003926702.1| PREDICTED: contactin-1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 1007
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 475 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGR 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 825 I---VESYQIRYWAAHDREEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 881
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+R T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 882 SDRIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPIPERTTKPYPADIVVQFKD 239
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 389
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 493
>gi|327269142|ref|XP_003219354.1| PREDICTED: contactin-5-like [Anolis carolinensis]
Length = 1098
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 187/585 (31%), Positives = 280/585 (47%), Gaps = 25/585 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V + C P+A+PKP WKK + R + +G+L I ++ D G Y C
Sbjct: 493 KGQEVAVECKPQASPKPTISWKKGDKALRENKRITVLPDGSLRILNATKSDEGKYVCRGE 552
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ + P + + ++ L C A + LDV + WT NG
Sbjct: 553 NVFGSAEITASVFVKE-PTRIDLSPKRTELTVGESIVLSCKALHDPSLDVIFHWTLNGQP 611
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ + + L I N AG Y C V++T IS + ++V GPPG
Sbjct: 612 IDFEKEGGHFESIRVQVSSADLMIRNILLMHAGRYGCRVQTTADSISDEAELLVRGPPGP 671
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +T+AT+ WT GA N PIT Y + AR+ ++ W + + +G
Sbjct: 672 PGVVIVEEITETTATLSWTPGADNHSPITSYNLQARSPFSLGW-----QTVKTVPETISG 726
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N++G G+PS+PS T P AP+ + G G+
Sbjct: 727 DMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTKEAVPKTAPANVSGRSGRRH 786
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 787 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 845
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + G + + I + W R N
Sbjct: 846 EVKVGVYNNKGDGPFSPIVVICSAEGEPSAAPTDVKATGLSVSEILIAW------RHNKE 899
Query: 423 --GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
GR G + YWK+ EE A + + ++ GL+ +T Y+++V AYN AG GP
Sbjct: 900 SVGRPQGFEVGYWKDMEQEEAAEKARTEGNESSIILTGLEGNTLYHLRVKAYNAAGYGPP 959
Query: 481 SERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P + PS + I+ + + V + W V P E ++GYKV + +
Sbjct: 960 SNAVRVATKKSPPSQAPSNIMWIQ--DGSHVSLGWEPVRPLANESDVMGYKV----LFRQ 1013
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+N +I T + +V L Y + V A S GGDG SS
Sbjct: 1014 EGHSNSQVIETQKT--SAVVLLPDVGVYIIEVRAVSEGGDGTPSS 1056
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R ++ NG L+I V++ D+G+Y C A N HG +
Sbjct: 409 CKAIGKPRPTYRWLKNGVPLWPESRIEMV-NGVLMIHSVNQSDAGMYQCVAENKHGAIYT 467
Query: 72 KGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P++ L I I + + + C +++ + G+ L
Sbjct: 468 SAELRILASAPTFPASHLKKTIIITKGQEVAVECKPQASPKPTISW-------KKGDKAL 520
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + + DG L I NA+ +D G+Y C ++ G +V V+ P
Sbjct: 521 RENKRITVLPDGS-LRILNATKSDEGKYVCRGENVFGSAEITASVFVKEP 569
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 12/183 (6%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G + + C P P W+K S R + L I V +D+G Y C A
Sbjct: 311 AKGSTIKMECFALGNPVPTISWRKVNGPNPSKARLRK-SQAVLEIPNVQLEDAGTYECKA 369
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + +G+L V P + E+L + + L+ C A + Y W NGV
Sbjct: 370 ENSRGRNVFRGQLQVYTYPHWTERL-NDTQLDSGDQLRWECKAIGKP--RPTYRWLKNGV 426
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ I + G+L I + + +DAG Y+CV ++ G I T + I+ P
Sbjct: 427 PL-------WPESRIEMVNGVLMIHSVNQSDAGMYQCVAENKHGAIYTSAELRILASAPT 479
Query: 182 LPG 184
P
Sbjct: 480 FPA 482
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V++ C A P P + W ++G I S R + E ++ +P D+G+Y C TN+
Sbjct: 117 VSLSCQARANPTPTYKWLRNGTEIEIESDYRYSVIEGSIIINNPSETKDTGLYQCITTNM 176
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 177 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWVFNEF 233
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 234 ---PSFVAEDSRRFISQETGNLYISKVQPSDVGSYICLVKNTV 273
>gi|345323035|ref|XP_003430665.1| PREDICTED: contactin-5 [Ornithorhynchus anatinus]
Length = 1023
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 290/622 (46%), Gaps = 25/622 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+A+PKP WKK + R + +G+L I S+ D G Y C
Sbjct: 418 KGQEVIIECKPQASPKPTISWKKGDKAVRESKRTAVLPDGSLRILNASKYDEGKYICQGE 477
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P + + ++ L C A + LDV + WT G
Sbjct: 478 NVFGSAEFIASVFVKE-PTRIELAPKRTELTVGESIVLSCKAIHDPSLDVTFYWTLKGQP 536
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I D E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 537 IDFEKDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGS 596
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ + +AT+ W+ GA N PIT Y + AR+ ++ W + D TG
Sbjct: 597 PGIVIVEEITENTATLSWSPGADNHSPITAYNLQARSPFSLGW-----QTVKTVPDVITG 651
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 652 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSAPSRMIRTNEAVPKTAPANVSGRSGRRH 711
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 712 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 770
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V+W + I+E++
Sbjct: 771 EVKVGVYNNKGDGPFSHIVVICSAEGEPSTAPTDVKATSVSVSEILVSW---KHIKESL- 826
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YW++ + EE A + + L+ L+ +T Y++ V A+N AG GP S
Sbjct: 827 GRPQGFEVGYWRDMDQEEAAETVKTGGNESSVLLTRLEGNTLYHLTVRAFNGAGYGPPSA 886
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + P + + + V + W V P E ++GYKV Q S
Sbjct: 887 EIQAATKKSPPSQAPQNIMWEQ-QGSQVSLGWEPVRPLANESEVMGYKVSFRHEGQSNSE 945
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGE----EKE 596
+T + +V L Y + V AFS GGDG SS ++ G+ +
Sbjct: 946 VIET------QKNQAVVLLPDVGVYIIEVRAFSEGGDGTASSQIRVPSYSGGKITSAQST 999
Query: 597 FKSGSPALYSASTTLLLVMSST 618
+ SP+ S + L L++ ST
Sbjct: 1000 LHTFSPSSSSVTLLLALIVPST 1021
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + G L I V DD+G+Y C
Sbjct: 235 AAKGTTVKMECFALGNPVPTISWVKVNGYIPSKARLRK-SQGVLEIPNVQLDDAGMYECR 293
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + V W NG
Sbjct: 294 AENSRGRNSFRGQLQVFTYPHWVERL-NDTHLDSGSPLRWECKAIGKPRPTVR--WLKNG 350
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ + I + G+L I N + +DAG Y+C+ ++ G I
Sbjct: 351 LPLWPQS-------GIEMVNGILMIHNVNQSDAGMYQCLAENKYGTI 390
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + E ++ SP DSG Y C A+N
Sbjct: 42 VALDCEARGDPAPNYRWLRNGTEIDLESDYRYSLIEGNFIISSPSEAKDSGSYQCLASNT 101
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ ++ + ++ + +++ + + L CS H+ E ++Y W N
Sbjct: 102 FGSILSREAILQFAYLRNFSGRTRSAVSVREGQGVVLICSPPPHSPE---ISYSWVFNEF 158
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ D G L I+ AD G Y C+VK+TV
Sbjct: 159 ---PSFVAEDSRRFISQDTGNLYISKVQAADVGSYICLVKNTV 198
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P W K+G + ++ NG L+I V++ D+G+Y C A N +G +
Sbjct: 334 CKAIGKPRPTVRWLKNGLPLWPQSGIEMV-NGILMIHNVNQSDAGMYQCLAENKYGTIYA 392
Query: 72 KGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P++ QL I I + + + C +++ + G+ +
Sbjct: 393 NAELKILASAPTFALNQLKQTIVITKGQEVIIECKPQASPKPTISW-------KKGDKAV 445
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + + DG L I NAS D G+Y C ++ G +V V+ P
Sbjct: 446 RESKRTAVLPDGS-LRILNASKYDEGKYICQGENVFGSAEFIASVFVKEP 494
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + C+P +P+ + W + + + RR I ++ GNL IS V D G Y
Sbjct: 132 EGQGVVLICSPPPHSPEISYSWVFNEFPSFVAEDSRRFISQDTGNLYISKVQAADVGSYI 191
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P +T A +++ C A
Sbjct: 192 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNP 251
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ ++++ NG L + + G+LEI N DAG YEC +++ G+ S
Sbjct: 252 VPTISWVKV-NGYIPSKARLRKSQ--------GVLEIPNVQLDDAGMYECRAENSRGRNS 302
Query: 170 TKTTVIV 176
+ + V
Sbjct: 303 FRGQLQV 309
>gi|387762905|ref|NP_001248680.1| contactin 1 precursor [Macaca mulatta]
gi|402885642|ref|XP_003906258.1| PREDICTED: contactin-1 isoform 1 [Papio anubis]
gi|355564139|gb|EHH20639.1| Neural cell surface protein F3 [Macaca mulatta]
gi|380787725|gb|AFE65738.1| contactin-1 isoform 1 precursor [Macaca mulatta]
Length = 1018
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A ++ LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 893 SDTIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 215
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|355786012|gb|EHH66195.1| Neural cell surface protein F3 [Macaca fascicularis]
Length = 1018
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A ++ LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 893 SDTIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 215
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|402885644|ref|XP_003906259.1| PREDICTED: contactin-1 isoform 2 [Papio anubis]
Length = 1007
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A ++ LD+ ++W+ NG
Sbjct: 475 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASSDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 825 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 881
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 882 SDTIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPIPERTTKPYPADIVVQFKD 239
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 389
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 493
>gi|114645304|ref|XP_001168046.1| PREDICTED: contactin-1 isoform 3 [Pan troglodytes]
Length = 1007
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 475 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V ++ +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGAKVLSSSEISVHW---EHVLEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 825 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 881
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 882 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPIPERTTKPYPADIVVQFKD 239
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 389
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 493
>gi|403262979|ref|XP_003923841.1| PREDICTED: contactin-5 [Saimiri boliviensis boliviensis]
Length = 1100
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 289/615 (46%), Gaps = 27/615 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VIIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W I ++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTEVKATSVSVSEILVAWKHI----KDSLG 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + Q S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESDVVGYKVFYRQEGQSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGEEKEFKSGS 601
+T L A +V L Y + V A+S GGDG SS ++ G+ +S
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASSQIRVPSYSGGKITSAQSTL 1077
Query: 602 PALYSASTTLLLVMS 616
L + ST++ L+++
Sbjct: 1078 HTLSTPSTSVTLLLA 1092
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQS-------RVEMVNGVLMIRNVNQSDAGMYQCLAENKYGAIYASAELKILAAAP 480
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|114645302|ref|XP_509005.2| PREDICTED: contactin-1 isoform 12 [Pan troglodytes]
gi|410352791|gb|JAA42999.1| contactin 1 [Pan troglodytes]
Length = 1018
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V ++ +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGAKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|291384023|ref|XP_002708477.1| PREDICTED: contactin 5 [Oryctolagus cuniculus]
Length = 1108
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 287/617 (46%), Gaps = 24/617 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R I +GNL I S+ D G Y C
Sbjct: 504 KGREVEIECKPQGSPKPAISWKKGDKAVRENKRIAILPDGNLRILNASKSDEGKYVCRGE 563
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G E + V P+ E P +I + ++ L C A + LDV + WT G
Sbjct: 564 NIFGSAEIVASVSVKE-PTRIELTPKRIELTVGESIVLNCKAIHDASLDVNFFWTLKGQP 622
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 623 IEFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 682
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +++AT+ W+ A N P+T Y + AR+ ++ W + + TG
Sbjct: 683 PGVVIVEEITESTATLSWSPAADNHSPVTSYNLQARSPFSLGW-----QTVKTVPEIITG 737
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 738 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRH 797
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 798 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 856
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++
Sbjct: 857 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSMSMSEILVAW---KHIKESL- 912
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 913 GRPQGFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSS 972
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + PS + + + V + W V E ++GYKV + S+
Sbjct: 973 EVSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVRSLANESEVLGYKVFYRQEGHTNSQ 1031
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSP 602
+T P +V L Y + V A+S GGDG SS I + S
Sbjct: 1032 VIETQKPQA------VVPLPDAGVYIIEVRAYSEGGDGTNSS-QIRVPSYSGGKITSAQS 1084
Query: 603 ALY----SASTTLLLVM 615
L+ S+S TLLL +
Sbjct: 1085 TLHTLSTSSSVTLLLAL 1101
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 321 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 379
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + + W NG
Sbjct: 380 AENARGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTFRWLKNG 436
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ L + + G+L I + + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 437 APL-------LPQSRVEMVNGVLMIHSVNQSDAGMYQCLAENKYGAIYASAELKILASAP 489
Query: 180 PGLPGGVQ 187
P ++
Sbjct: 490 TFAPNQLK 497
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + E ++ +P D+G Y C ATN
Sbjct: 128 VALNCESRGNPVPSYRWLRNGTEIDLESDYRYSLIEGTFIISNPSEAKDAGHYQCLATNT 187
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 188 FGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPPHSPEII---YSWVFNEF 244
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 245 ---PSFVAEDSRRFISQETGNLYISKVQASDVGSYICLVKNTV 284
>gi|348573577|ref|XP_003472567.1| PREDICTED: contactin-5-like [Cavia porcellus]
Length = 1133
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 272/578 (47%), Gaps = 19/578 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + + I +G+L I S+ D G Y C N+ G
Sbjct: 533 VIIECKPQGSPKPNISWKKGDKAVRESKKIAILPDGSLRILNASKSDEGKYVCRGENIFG 592
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 593 SAEIVASVSVKE-PTKIELTPKRTELTVGESIVLNCKAIHDATLDVNFYWTLKGQPIDFE 651
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 652 KDGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIV 711
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 712 IVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMES 766
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I
Sbjct: 767 AMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVI 826
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 827 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 885
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + I+E++ GR
Sbjct: 886 GVYNNKGDGPFSQIVVICSAEGEPSTAPTDVKATSMSVSEILVAW---KHIKESL-GRPQ 941
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 942 GFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSA 1001
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T + P + PS + + P V + W V P E ++GYKV + S+ +T
Sbjct: 1002 TTKKSPPSQAPSNLRWEQQGP-QVALGWEPVRPLANESEVLGYKVFYRQEGHSNSQVIET 1060
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
P +V L Y + + A+S GGDG SS
Sbjct: 1061 QKPQA------VVPLPDAGVYIIEIRAYSEGGDGTASS 1092
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V +D+GIY C
Sbjct: 346 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLEDAGIYECR 404
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + E+L + + L+ C A + Y W NG
Sbjct: 405 AENSRGKNSFRGQLQIYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 461
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L I+ G+L I + + +D+G Y+C+ ++ G I S + ++ P
Sbjct: 462 VPL-------LPQTRIHTVNGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASAP 514
Query: 180 PGLPGGVQ 187
P ++
Sbjct: 515 TFAPNQLK 522
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C A P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 153 VALNCEVRANPVPSYRWLRNGTQIDLESDYRYSLIDGTFIINNPSEAKDSGQYQCLATNS 212
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 213 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 269
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 270 ---PSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 309
>gi|219518168|gb|AAI44187.1| Contactin 5 [Homo sapiens]
Length = 1100
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSREKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|7657359|ref|NP_055176.1| contactin-5 isoform 1 precursor [Homo sapiens]
gi|343168755|ref|NP_001230199.1| contactin-5 isoform 1 precursor [Homo sapiens]
gi|55976223|sp|O94779.2|CNTN5_HUMAN RecName: Full=Contactin-5; AltName: Full=Neural recognition molecule
NB-2; Short=hNB-2; Flags: Precursor
gi|5672487|dbj|BAA36579.2| hNB-2 [Homo sapiens]
gi|119587396|gb|EAW66992.1| contactin 5, isoform CRA_a [Homo sapiens]
Length = 1100
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|120659964|gb|AAI30620.1| CNTN5 protein [Homo sapiens]
Length = 1100
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|114639974|ref|XP_001148002.1| PREDICTED: contactin-5 isoform 2 [Pan troglodytes]
gi|332837597|ref|XP_001147868.2| PREDICTED: contactin-5 isoform 1 [Pan troglodytes]
Length = 1100
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ ++SAT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESSATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVRGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQS-------RVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|344276488|ref|XP_003410040.1| PREDICTED: contactin-6 [Loxodonta africana]
Length = 1016
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/623 (29%), Positives = 298/623 (47%), Gaps = 29/623 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A P+ WK+ + R + E+G+L I V+R D+G Y+C ATN
Sbjct: 412 GGDISIECKPIAFPRAAVSWKRGTENLRQSKRVFLIEDGSLKIYNVTRSDAGSYTCIATN 471
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ +S G L+V + P K+ + ++ L C + ++V ++W+ NG I
Sbjct: 472 QFGVAKSTGSLVVKER-TVITIPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDII 530
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + T I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 531 ---DLKKGVTHFERIGGESAGDLMIRNIQLNHSGKYMCTVQTTLEILSAVADIIVRGPPG 587
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + +++ + W G N PI + I RT ++ W + +
Sbjct: 588 PPEDVRVEHISSSTSQLSWRPGPDNNSPIQIFTIQTRTPFSLGW-----QAVSTVPEILN 642
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP+ I GGGG
Sbjct: 643 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSR 702
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 703 SELVITWESIPEELQNGEGFGYIVMFRPVGSTTWTKERVLSVESSRF-IYRNESIIPLSP 761
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S ++S ED P++AP+G + +++ + V+WN I+ R
Sbjct: 762 FEVKVGVYNNEGEGSLSTASIVYSGEDEPRMAPRGTSVQSVSASEMEVSWNAIDWNRNT- 820
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL--IVGLQPDTKYYVKVMAYNNAGEGP 479
GR++G+ + YW +D+ E ++ R + N + I GL+ +T Y+ V AYN AG GP
Sbjct: 821 -GRVLGYEVLYWTDDSKE--SMIGKIRVSGNVTVKNITGLKANTLYFASVRAYNTAGTGP 877
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 878 SSTPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQS 936
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ I+ NT +V + Y + + S+GGDG S ++ + S
Sbjct: 937 KTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSE---EIRIPKMSSLSS 987
Query: 600 GSPALYSASTTLLLVMSSTLYIF 622
+ S L V+ T Y F
Sbjct: 988 RGIQVLEPSVHFLPVVLVTFYSF 1010
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 132/602 (21%), Positives = 228/602 (37%), Gaps = 73/602 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSGIY C A N + + +
Sbjct: 327 CKASGKPSPYYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGIYQCAAENKYQIIYA 385
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G +L +
Sbjct: 386 NAELKVLASAPNFSKNPIKKVSVVQVGGDISIECKPIAFPRAAVSWKR-----GTENLRQ 440
Query: 132 LETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPPG---- 181
+ + I+ G L+I N + +DAG Y C+ V + G + K ++ PP
Sbjct: 441 SKRVFL-IEDGSLKIYNVTRSDAGSYTCIATNQFGVAKSTGSLVVKERTVITIPPSKMDV 499
Query: 182 -------LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEH 231
LP QV W+ D + +TH++ I + +
Sbjct: 500 TVGESIVLP--CQVSHDPSIEVVFVWSFNGDIIDLKKGVTHFERIGGE-------SAGDL 550
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + + +
Sbjct: 551 MIRNIQLNHSGKYMCTVQTTLEILSAVADIIVRG---------PPGPPEDVRVEHISSST 601
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S+ +SW P P N+P + I R +Q+ T+ E N
Sbjct: 602 SQ------------LSWRPGP--DNNSPIQIFTIQTRTPFSLGWQAVSTVPEILNGKTYN 647
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N +G G S+ + + +P VAP + G + + + +
Sbjct: 648 ATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVI 707
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT-----RNWALIVGLQPDTK 464
TW I +N G G+ + + + T LS + RN ++I P +
Sbjct: 708 TWESIPEELQN--GEGFGYIVMFRPVGSTTWTKERVLSVESSRFIYRNESII----PLSP 761
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
+ VKV YNN GEG S + + P+ P ++ ++ + + V+W + +
Sbjct: 762 FEVKVGVYNNEGEGSLSTASIVYSGEDEPRMAPRGTSVQSVSASEMEVSWNAIDWNRNTG 821
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++GY+V W D S + GN +I L Y V A++ G G S+
Sbjct: 822 RVLGYEVLYWTDDSKESMIGKIRVS-GNVTVKNITGLKANTLYFASVRAYNTAGTGPSST 880
Query: 585 PA 586
P
Sbjct: 881 PV 882
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + ++ + C P P W++ DG+++ G+ K ++ +L P ++D G Y
Sbjct: 227 AAKDSSIKLECFALGNPVPNISWRRMDGSLLP--GKVKYSKSKAILEIPNFQQEDEGFYE 284
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CTA N+ G + +KG+LI + P +EQ ++ + +L C A + Y W
Sbjct: 285 CTAGNLRGRNIAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGKP--SPYYTWLK 341
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 342 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGIYQCAAEN 378
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P++ WK+ D +I + + G+L IS P + D G Y C ATN
Sbjct: 34 IILNCAAHGYPLPQYRWKQNDTDIDFTMSYHYRLDGGSLAISSPPTAQDIGTYQCLATNP 93
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C + D++Y WT N
Sbjct: 94 LGTILSRKAKLQFAYIEEFETKTRSTVSVREGQGVVLLC-GPPPHVGDLSYAWTFND--- 149
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 150 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 199
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 22/191 (11%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + W + N + RR + E GNL I+ V D G Y+
Sbjct: 124 EGQGVVLLCGPPPHVGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYT 183
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G L + P + P I A +++L C A
Sbjct: 184 CFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFALGNP 243
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ ++++ + G + ++ +LEI N D G YEC + G+
Sbjct: 244 VPNISWRRMDGSLLPGKVKYSK--------SKAILEIPNFQQEDEGFYECTAGNLRGRNI 295
Query: 170 TKTTVIVEGPP 180
K +I PP
Sbjct: 296 AKGQLIFYAPP 306
>gi|395520400|ref|XP_003764321.1| PREDICTED: contactin-5 [Sarcophilus harrisii]
Length = 1015
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 187/582 (32%), Positives = 274/582 (47%), Gaps = 19/582 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 410 KGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNASKPDEGKYICRGE 469
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P KI + ++ L C A + LDV++ WT G
Sbjct: 470 NVFGSAEILASVFVKE-PTRIELTPKKIELTVGESIVLNCKAIHDASLDVSFYWTLKGQP 528
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 529 IDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEADLLVRGPPGP 588
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ ++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 589 PGIVIVEEITDSTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITG 643
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 644 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPANVSGRSGRRH 703
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 704 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 762
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 763 EVKVGVYNNKGDGPFSNIVVICSAEGEPSAAPTDVKATSLSVSEILVAW---KHIKESL- 818
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ EE A + + ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 819 GRPQGFEVGYWKDMEQEEAAETVKTGGNESSIILTGLEGNTLYHLTVRAYNGAGYGPPSS 878
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + PS + + + V + W V P E ++GYKV +
Sbjct: 879 EVRAATKKSPPSQAPSNIMWEQ-QGSQVSLGWEPVRPLANESEVVGYKV----FYRQEGH 933
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+N +I T +V L Y + V AFS GGDG SS
Sbjct: 934 SNSQVIETEKT--QAVVLLPDVGVYIIEVRAFSEGGDGTASS 973
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + G L I V DD+GIY C
Sbjct: 227 AAKGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQ-GVLEIPNVQLDDAGIYECR 285
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V + P + E+L + + L+ C A + Y W NG
Sbjct: 286 AENSRGRNSFRGQLQVYNYPHWVEKL-NDTHLDSGSPLRWECKATGKP--RPTYRWLKNG 342
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L + + G+L I N + +DAG Y+C+ ++ G I S + V+ P
Sbjct: 343 VPL-------LAQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAP 395
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C+P +P+ + W + + + RR I E GNL IS V D G Y
Sbjct: 124 EGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 183
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P +T A +++ C A
Sbjct: 184 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGMTVKMECFALGNP 243
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ ++++ NG L + + G+LEI N DAG YEC +++ G+ S
Sbjct: 244 VPTISWMKV-NGYIPSKARLRKSQ--------GVLEIPNVQLDDAGIYECRAENSRGRNS 294
Query: 170 TKTTVIV 176
+ + V
Sbjct: 295 FRGQLQV 301
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
V + C P P + W ++G + S R + E GNL+I+ P D+G Y C N
Sbjct: 34 VALNCEARGNPVPNYRWLRNGTELDLESDYRYSLIE-GNLIINNPSEAKDAGHYQCLTAN 92
Query: 65 VHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNG 121
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 93 SLGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNE 149
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 150 F---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 190
>gi|449484285|ref|XP_002198167.2| PREDICTED: contactin-5 [Taeniopygia guttata]
Length = 1099
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 282/586 (48%), Gaps = 22/586 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C PEA+PKP WKK ++ R + +G+L I S+ D G Y C
Sbjct: 494 KGQEVVIECKPEASPKPTITWKKGDKVLRENKRITVLPHGSLRILNASKSDEGRYLCQGV 553
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P K+ + ++ L C A + +DV + WT NG
Sbjct: 554 NVFGSAEIIASVSVKE-PTRIELTPKKVELTVGESIVLSCRALHDSTMDVTFYWTLNGQP 612
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++ +S +T ++V GPPG
Sbjct: 613 IDFEKEGGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPGP 672
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ T+AT+ W+ GA N PI+ Y + AR+ ++ W + D +G
Sbjct: 673 PGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDLISG 727
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N++G G+PS+PS T P P+ + G G+
Sbjct: 728 DMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRVIRTNEAVPKTPPANVSGRSGRRH 787
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E Q+ Y + +R N T E + + + R S T +
Sbjct: 788 ELVIAWEPVSEEFQSGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 846
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 847 EVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW---KHIKESL- 902
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ EE A + + L+ GL+ +T Y++ V AYN AG GP S
Sbjct: 903 GRPQGFEVGYWKDMQQEEAAEKVKTEGNESSILLTGLEGNTLYHLTVRAYNAAGYGPPST 962
Query: 483 RYLERTYRKAP-QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P Q P + + I+ + + V + W V P E ++GYKV + Q
Sbjct: 963 AVHAATKKSPPSQAPGNIMWIQ--DGSHVSLGWEPVRPLANESDVMGYKVLFRQEGQ--- 1017
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+N +I T + +V L Y + V A S GGDG +SP I
Sbjct: 1018 -SNSQVIETQKT--SAVVLLPDVGVYIIEVCAVSEGGDG-TASPQI 1059
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 14/184 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P W+K +G+ RK L I V +DSG+Y C
Sbjct: 311 AARGTTVKMECFALGNPVPTISWRKVNGHNPSKARLRK--SQAVLEIPNVQLEDSGMYEC 368
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L V P + E+L + + L+ C A + Y W N
Sbjct: 369 KAENSRGRNVFRGQLQVYTYPHWVEKL-NDTQLDSGDQLRWECKATGKP--RPTYRWLKN 425
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
GV + I + G+L I +A+ +DAG Y+C+ ++ G I + I+
Sbjct: 426 GVPLWPQS-------RIEMINGVLMIHSANVSDAGMYQCLAENKYGTIYASAELKILASA 478
Query: 180 PGLP 183
P P
Sbjct: 479 PTFP 482
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V++ C P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 114 EEKKVSLNCQARGNPTPTYRWLRNGTEINIESDYRFSLIEGSLIISNPSEMKDSGQYQCL 173
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 174 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 230
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 231 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 274
>gi|395841523|ref|XP_003793584.1| PREDICTED: contactin-1 isoform 2 [Otolemur garnettii]
Length = 1007
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 297/590 (50%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L IS ++R+D+GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEISNITRNDAGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 475 AENNRGKANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I A+T + W +V E
Sbjct: 594 GPPGGLRIDDIRATSVGLTWSRGSDNHSPISKYTIQAKTILSDDWKDVKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGS 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRE 419
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W + +E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVYWKHVLEKVVE 827
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++I+YW + EE A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 828 T-------YQIRYWAGHDREEAAHRIQVSSQEYSARLENLLPDTQYFVEVGACNSAGCGP 880
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S+ T + P KPP I I + + +TW +V E + GYKV Q
Sbjct: 881 PSDVIETFTKKAPPSKPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 938
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T ++++ V + Y + V A S+GGDG +S I+
Sbjct: 939 HNGKLFST---HKHSIE---VPIPRDGEYVVEVRAHSDGGDGVVSQVKIS 982
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCFVSS 204
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGLYECEAENIRGKDRHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGY---------------SYHKGELRLYDVTFDHAGMYQCIAENTHGAI 389
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ D +G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFDHAGMYQCIAENTHGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI+N + DAG Y C ++ GK + T+++ P
Sbjct: 447 --SSRILIWEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITDP 493
>gi|126327110|ref|XP_001364316.1| PREDICTED: contactin-5 [Monodelphis domestica]
Length = 1015
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 274/582 (47%), Gaps = 19/582 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 410 KGQEVLIECKPQGSPKPTISWKKGDKAVRESKRIAILPDGSLRILNASKSDEGKYICQGE 469
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P + + ++ L C A + LDV++ WT G
Sbjct: 470 NVFGSAEILASVFVKE-PTRIELTPKRTELTVGESVVLNCKAIHDTSLDVSFYWTLKGQP 528
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 529 IDFEKERGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEADLLVRGPPGP 588
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +T+AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 589 PGIVIVEEITETTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITG 643
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 644 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPANVSGRSGRRH 703
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 704 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 762
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 763 EVKVGVYNNKGDGPFSNIVVICSAEGEPSAAPTDVKATSLSVSEILVAW---KHIKESL- 818
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ EE A + + ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 819 GRPQGFEVGYWKDMEQEEAAETVKTGGNESSIILTGLEGNTLYHLTVRAYNGAGYGPASS 878
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + PS + + + V + W V P E ++GYKV +
Sbjct: 879 EVRAATKKSPPSQAPSNIMWEQ-QGSQVSLGWEPVRPLANESEVVGYKV----FYRQEGH 933
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+N +I T +V L Y + V AFS GGDG SS
Sbjct: 934 SNSQVIETQKT--QAVVLLPDVGVYIIEVRAFSEGGDGTASS 973
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + G L I V DD+GIY C
Sbjct: 227 AAKGMTVKMECFALGNPVPTISWMKVNGYIPSKARLRKSQ-GVLEIPNVQLDDAGIYECR 285
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V + P + E+L + + L+ C A + Y W NG
Sbjct: 286 AENSRGRNSFRGQLQVYNYPHWVEKL-NDTHLDSGSALRWECKATGKP--RPTYRWLKNG 342
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L + + G+L I N + +DAG Y+C+ ++ G I S + V+ P
Sbjct: 343 VPL-------LSQSRVEMVNGILMIHNVNQSDAGMYQCLAENKYGSIYASAELKVLASAP 395
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
V + C P P + W ++G I S R + E GNL+IS P DSG Y C N
Sbjct: 34 VALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIE-GNLIISNPSEAKDSGHYQCLTAN 92
Query: 65 VHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNG 121
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 93 FLGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNE 149
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 150 F---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 190
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 25/225 (11%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C+P +P+ + W + + + RR I E GNL IS V D G Y
Sbjct: 124 EGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 183
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P +T A +++ C A
Sbjct: 184 CLVKNTVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPYMVTAAKGMTVKMECFALGNP 243
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ ++++ NG L + + G+LEI N DAG YEC +++ G+ S
Sbjct: 244 VPTISWMKV-NGYIPSKARLRKSQ--------GVLEIPNVQLDDAGIYECRAENSRGRNS 294
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + V P + + SA ++W AT G+P Y+
Sbjct: 295 FRGQLQVYNYPHWVEKLNDTHLDSGSA-LRWECKAT-GKPRPTYR 337
>gi|28373119|ref|NP_778203.1| contactin-1 isoform 2 precursor [Homo sapiens]
gi|397510802|ref|XP_003825776.1| PREDICTED: contactin-1 isoform 2 [Pan paniscus]
gi|469045|gb|AAA67921.1| h-contactin 2 precursor [Homo sapiens]
gi|119578228|gb|EAW57824.1| contactin 1, isoform CRA_b [Homo sapiens]
Length = 1007
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 295/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 475 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 825 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 881
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 882 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPIPERTTKPYPADIVVQFKD 239
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 389
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 493
>gi|28373129|ref|NP_780775.1| contactin-5 isoform 2 precursor [Homo sapiens]
gi|5672494|dbj|BAA36580.2| hNB-2s [Homo sapiens]
gi|119587397|gb|EAW66993.1| contactin 5, isoform CRA_b [Homo sapiens]
Length = 1026
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 425 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 484
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 485 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 540
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 541 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 601 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 656 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 716 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 775 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 830
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 831 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 890
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 891 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 949
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 950 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 984
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGIYECR 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 297 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 354 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 45 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 104
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 105 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 162 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 201
>gi|219520630|gb|AAI44186.1| CNTN5 protein [Homo sapiens]
Length = 1100
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R + +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|332207987|ref|XP_003253076.1| PREDICTED: contactin-5 isoform 1 [Nomascus leucogenys]
gi|332207989|ref|XP_003253077.1| PREDICTED: contactin-5 isoform 2 [Nomascus leucogenys]
Length = 1100
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + P + + + V ++W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPGNLRWEQ-QGSQVSLSWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKVECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPIPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|28373117|ref|NP_001834.2| contactin-1 isoform 1 precursor [Homo sapiens]
gi|397510800|ref|XP_003825775.1| PREDICTED: contactin-1 isoform 1 [Pan paniscus]
gi|2497301|sp|Q12860.1|CNTN1_HUMAN RecName: Full=Contactin-1; AltName: Full=Glycoprotein gp135;
AltName: Full=Neural cell surface protein F3; Flags:
Precursor
gi|469043|gb|AAA67920.1| h-contactin 1 precursor [Homo sapiens]
gi|119578226|gb|EAW57822.1| contactin 1, isoform CRA_a [Homo sapiens]
gi|119578227|gb|EAW57823.1| contactin 1, isoform CRA_a [Homo sapiens]
Length = 1018
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 295/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|297690021|ref|XP_002822428.1| PREDICTED: contactin-5 isoform 1 [Pongo abelii]
Length = 1100
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A + PG Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQAVVPLPDPGV-YIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALKCEVRGNPDPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|395841521|ref|XP_003793583.1| PREDICTED: contactin-1 isoform 1 [Otolemur garnettii]
Length = 1018
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 297/590 (50%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L IS ++R+D+GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEISNITRNDAGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFTRENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I A+T + W +V E
Sbjct: 605 GPPGGLRIDDIRATSVGLTWSRGSDNHSPISKYTIQAKTILSDDWKDVKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSVPSNKIRTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRE 419
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W + +E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGLKVLSSSEISVYWKHVLEKVVE 838
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++I+YW + EE A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 839 T-------YQIRYWAGHDREEAAHRIQVSSQEYSARLENLLPDTQYFVEVGACNSAGCGP 891
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S+ T + P KPP I I + + +TW +V E + GYKV Q
Sbjct: 892 PSDVIETFTKKAPPSKPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 949
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T ++++ V + Y + V A S+GGDG +S I+
Sbjct: 950 HNGKLFST---HKHSIE---VPIPRDGEYVVEVRAHSDGGDGVVSQVKIS 993
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDKGNYSCFVSS 215
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDRHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHKGELRLYDVTFDHAGMYQCIAENTHGAI 400
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ D +G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFDHAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI+N + DAG Y C ++ GK + T+++ P
Sbjct: 458 --SSRILIWEDGSLEISNITRNDAGIYTCFAENNRGKANNTGTLVITDP 504
>gi|296216730|ref|XP_002754694.1| PREDICTED: contactin-5 isoform 1 [Callithrix jacchus]
gi|296216732|ref|XP_002754695.1| PREDICTED: contactin-5 isoform 2 [Callithrix jacchus]
Length = 1100
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 289/615 (46%), Gaps = 27/615 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C N+ G
Sbjct: 499 VVIECTPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENIFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L+ + P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIA-LLSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNLIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + ++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHV----KDSLG 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESDVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGEEKEFKSGS 601
+T L A IV L Y + V A+S GGDG SS ++ G+ +S
Sbjct: 1024 IET-----QKLQA-IVPLPDAGVYIIEVRAYSEGGDGTASSQIRVPSYSGGKITSAQSTL 1077
Query: 602 PALYSASTTLLLVMS 616
L + ST++ L+++
Sbjct: 1078 HTLSTPSTSVTLLLA 1092
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + GLL I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPFSPQS-------RVEMVNGLLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILAAAP 480
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G SK L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSKEATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ D G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQDTGNLYISKVQTSDVGSYICLVKNTV 275
>gi|440892313|gb|ELR45556.1| Contactin-3, partial [Bos grunniens mutus]
Length = 877
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 277/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK I+ R +G L I V++ D+GIY+C A N
Sbjct: 273 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 332
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LL + W NG
Sbjct: 333 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 391
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 392 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 450
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 451 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 505
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 506 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 565
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S ++ YE
Sbjct: 566 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNESILPFSLYE 624
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P +AP V + +S+ I V+WN I N G
Sbjct: 625 VKVGVYNNKGEGPFSPVTTVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAIPWKLSN--G 682
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW E+++ A + GL+ + YY V A+N+AG GP S
Sbjct: 683 HLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSAT 742
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 743 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 801
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 802 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 835
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 188 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 246
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L W + G +
Sbjct: 247 SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS----W-----KKGEV 297
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 298 IVQENERTSFLNDGG-LKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEP 348
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 88 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 146
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 147 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 203
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 204 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 256
Query: 179 P 179
P
Sbjct: 257 P 257
>gi|148223930|ref|NP_001081205.1| contactin A precursor [Xenopus laevis]
gi|3219157|dbj|BAA28780.1| contactin A [Xenopus laevis]
gi|213623272|gb|AAI69517.1| Contactin A [Xenopus laevis]
Length = 1009
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 291/600 (48%), Gaps = 51/600 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPK KF W K ++ + R I+++G+L I +++ D G Y+C
Sbjct: 412 AAKGGRVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEILNITKLDEGSYTCY 471
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G L V + P + N ++C+A + LD++YIW+ NG
Sbjct: 472 AENDRGKANGTAVLSVT-AATKITLAPSNADVTVGENATMQCNASHDPTLDLSYIWSLNG 530
Query: 122 VRIGNMDLNE------LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
I D+ + + P N G L I NA AG Y C ++ V S ++
Sbjct: 531 FPI-EFDMEDRHYERAIRLPLQNDVGSELIIKNAQLKHAGRYTCTAQTIVDNSSASADLV 589
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V GPPG PGG++V E+ TS + W+ G N +PI+ Y I AR + W +V
Sbjct: 590 VRGPPGPPGGIRVEELRDTSVKLTWSSGTDNHQPISKYNIQARNILSDDWKDVK-----T 644
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
E G E + L+PW YEF+VIA N LG GEPS PSP+ T P AP+ +G
Sbjct: 645 ENPNIEGYMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVG 704
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
GGGG +L+++W+PL RE Y + ++ N E++ +V P
Sbjct: 705 GGGGSNRELTVTWQPLSREYHYGDGFGYGVAFKPFNVREWRK-----------VIVSNPE 753
Query: 356 EFYY----------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+Y T++++KV+A N VG GP S V ++SAED+P AP V +ST
Sbjct: 754 SGHYVHKDDTITPATQFQIKVKAFNKVGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSST 813
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
++V W+P+ + G++++YW+ + E A + + GL P+T Y
Sbjct: 814 EVSVAWHPV------YEKSIEGYQVRYWRIQDKEAAAHRVQVKAADITTRLEGLMPNTHY 867
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
++V A+N+AG+GP S R L RKAP QKP ++ + +TW +V+ E
Sbjct: 868 NLEVRAFNSAGDGPPS-RTLTFLTRKAPPSQKPQITSAVR--YGSQYIITWEHVAHLSNE 924
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ GYKV QD R ++++ + + Y + V A S GGDG ++
Sbjct: 925 SAVNGYKVL---YRQDGQRDGKLYTTPKHSVELPVPEEG---EYVVEVRAHSEGGDGAVA 978
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C + P+P W K+G G G RK S ++ DD+GIY C A N
Sbjct: 331 GSDLHWSCVVKGKPQPSIRWLKNGASYGKGELRK---------SGLTLDDAGIYQCIAEN 381
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+HG+ + L +L +E P + + A + ++ + + W+
Sbjct: 382 MHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKG---- 437
Query: 125 GNMDLNELETPNINI---DGGLLEITNASFADAGEYECVVKSTVGK 167
EL N + D G LEI N + D G Y C ++ GK
Sbjct: 438 -----TELLINNSRVSIWDDGSLEILNITKLDEGSYTCYAENDRGK 478
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 7/184 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + C+P ++ N I + RR + + NGNL I+ V + D G Y
Sbjct: 134 EGTGAVLICDPPPHFPDDLNYRWLLNEFPVFISTDNRRFVTQTNGNLYIAKVEQTDRGNY 193
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
SC ++ + I L + + P + T + + + + + +
Sbjct: 194 SCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALG 253
Query: 119 HNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I +NE + I++ G +L+I N D G YEC K+ G + + V V
Sbjct: 254 NPVPVITWRKINEAMPASAEISMSGAVLKIFNIQPEDEGTYECEAKNIKGLDTHRAYVYV 313
Query: 177 EGPP 180
EG P
Sbjct: 314 EGVP 317
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 60/169 (35%), Gaps = 33/169 (19%)
Query: 7 NVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
NVT+ C P P W+K I SG KIF I P +D G Y
Sbjct: 244 NVTLECFALGNPVPVITWRKINEAMPASAEISMSGAVLKIFN-----IQP---EDEGTYE 295
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G+D + + V P + E + +L C + + W
Sbjct: 296 CEAKNIKGLDTHRAYVYVEGVPEWVEHI-NDTERDIGSDLHWSCVVKGKPQPSIR--WLK 352
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG G G L + + DAG Y+C+ ++ G I
Sbjct: 353 NGASYGK---------------GELRKSGLTLDDAGIYQCIAENMHGII 386
>gi|414791|emb|CAA79696.1| contactin [Homo sapiens]
Length = 1018
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 195/592 (32%), Positives = 295/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S + I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLLAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|291408742|ref|XP_002720673.1| PREDICTED: contactin 6 [Oryctolagus cuniculus]
Length = 1117
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 196/628 (31%), Positives = 293/628 (46%), Gaps = 30/628 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+VTI C P A P+ W++ + R + E+G L I V+R D+G Y+C ATN
Sbjct: 512 GGDVTIECRPRAFPRATVSWRRGAEGLRQSRRLLLLEDGGLKIHNVTRSDAGPYTCLATN 571
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +LIV + P + + ++ L C + VA++W NG I
Sbjct: 572 QFGTARDTSQLIVKER-TVITVPPSNMDVTVGESIILPCQVSRDPSTAVAFLWLFNGDLI 630
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL T + G G L I N +G Y C V++ + +S V V GPPG
Sbjct: 631 ---DLRNGATHFERVGGESAGDLMIRNIQLRHSGRYLCTVQTPLESLSAAADVTVRGPPG 687
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P GV V V TS+ I+W G N PI + + RT ++ W +G + + +
Sbjct: 688 PPEGVSVEHVSSTSSHIRWRPGPDNNSPIQIFTVQTRTPFSVGW-----QAVGTDPEILS 742
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P P I GGGG
Sbjct: 743 GQTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTRASVPAVPPVNIEGGGGSR 802
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ++WEP+ E Q+ Y + +R T + ++ + V R S +
Sbjct: 803 SELVVTWEPIAEELQSGDGFGYLVMFRPLGSTAWTKASVASVESSRF-VYRNESIAPLSP 861
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV ND G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 862 FEVKVGVYNDQGEGSLSPVSIVYSGEDEPQLAPRGTSVQSFSASEVEVSWNAIAWNRNT- 920
Query: 422 RGRLIGHRIKYWKEDNPEET---AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW ED+ E A + TT+N I GL+ +T Y+ V AYN G G
Sbjct: 921 -GRVLGYEVLYWTEDSREPMIGKARVSGNITTKN---ITGLKANTIYFASVRAYNTGGTG 976
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 977 PSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQSRQ 1035
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFK 598
++ NT +V + Y + + S+GGDG SS I G
Sbjct: 1036 SKMH----VLETNNTSAELLVPFE--EDYLIEIRTVSDGGDG-SSSQEIRIP-GMSSLSS 1087
Query: 599 SGSPALYSASTTLLLVMSSTLYIFVAFS 626
G L S++ L V+ S + +F FS
Sbjct: 1088 RGIQVLGSSAHLLPAVLVSAVSLFGRFS 1115
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DS +Y C A N HG+ +
Sbjct: 427 CRASGKPSPWYTWFKNGEPLHPEERIQI-ENGTLVITTLNVSDSAVYQCAAENKHGVIST 485
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K H + W R G L +
Sbjct: 486 NAELRVLASAPDFSRNPIKRHSIVHVGGDVTIECRPRAFPRATVSW-----RRGAEGLRQ 540
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ DGG L+I N + +DAG Y C+ + G + +IV+
Sbjct: 541 SRRLLLLEDGG-LKIHNVTRSDAGPYTCLATNQFGTARDTSQLIVK 585
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ + ++ LL P ++D G+Y
Sbjct: 327 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKARFSKSQALLEIPNFQQEDEGVYE 384
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+L V + P +EQ ++ + +L C A + Y W
Sbjct: 385 CAAGNLRGRNLAKGQL-VFYAPPEWEQKIQNTHLSIYDSLFWECRASGKP--SPWYTWFK 441
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG + + I I+ G L IT + +D+ Y+C ++ G IST + V
Sbjct: 442 NGEPLHPEE-------RIQIENGTLVITTLNVSDSAVYQCAAENKHGVISTNAELRV 491
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P + W+ +G I R E G+L I SP + D+G+Y C ATN+
Sbjct: 134 VILSCAAAGYPAPHYRWRHNGTAIDFAVSERYRLEGGSLAIRSPRTDQDAGVYQCLATNL 193
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S+ RL + + + +++ + + L C + D++Y W N
Sbjct: 194 LGTTVSREARLQFAYIEDFEAKARSAVSVREGQGVVLLC-GRPPHVGDLSYAWAFND--- 249
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ ++E I+ G L I +D G Y C V + + S V GPP
Sbjct: 250 SLLSVHEDRRRFISQQTGNLYIAKVQPSDVGNYTCFVTNREARRS------VRGPP 299
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 22/191 (11%)
Query: 4 EGGNVTIFC-NPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYS 59
EG V + C P + W + +++ R+ F + GNL I+ V D G Y+
Sbjct: 224 EGQGVVLLCGRPPHVGDLSYAWAFNDSLLSVHEDRRRFISQQTGNLYIAKVQPSDVGNYT 283
Query: 60 CTATNVHGMDESKG-------RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G R + G P + P + A +++L C A
Sbjct: 284 CFVTNREARRSVRGPPSPLVQRADGVMGEYEPKIEVRFPDTVPAAKDSSVKLECFALGNP 343
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ D+++ G ++ + LLEI N D G YEC + G+
Sbjct: 344 VPDISWRRLDGSPLPGKARFSKSQ--------ALLEIPNFQQEDEGVYECAAGNLRGRNL 395
Query: 170 TKTTVIVEGPP 180
K ++ PP
Sbjct: 396 AKGQLVFYAPP 406
>gi|431901434|gb|ELK08460.1| Contactin-1 [Pteropus alecto]
Length = 1125
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 195/589 (33%), Positives = 295/589 (50%), Gaps = 28/589 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + +G R I+E+G+L I+ ++R+D GIY+C
Sbjct: 374 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSRTLIWEDGSLEINNITRNDGGIYTCF 433
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 434 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 492
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 493 YVIDFNKENIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 552
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 553 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYNIQTKTLLSDDWKDAKTDPPIIE---- 608
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 609 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 667
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ ++G V + + +T
Sbjct: 668 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPFT 726
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP GV + +S+ I+V W E+
Sbjct: 727 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTGVGVKVLSSSEISVHW-------EH 779
Query: 421 IRGRLI-GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ +++ ++I+YW + E A + A + L PDT+Y V+V A N+AG GP
Sbjct: 780 VVEKVVESYQIRYWSVHDKEAAAHRVQVNSQEYSARLENLLPDTQYSVEVRACNSAGCGP 839
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
SE +E +KAP P + + + +TW +V + E I Y+ + D
Sbjct: 840 PSE-MIETFTKKAPPSQPPKITSSVRSGSRYIITWDHVV-ALSNESTILYRPD-GQHDGK 896
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ + I V D + Y + V A S+GGDG +S I+
Sbjct: 897 LYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 936
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 200 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 251
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 252 DEGTYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 310
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 311 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENTYGAI 348
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 15/168 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 300 CVATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 350
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 351 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 405
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ + + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 406 -GSRTLIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 452
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 23 VWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81
+W+ + I R GNL+I+ P + D+G+Y C A+N +G+ S +
Sbjct: 24 IWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGVYYCLASNNYGIVRSTEATLSF--- 80
Query: 82 SYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPN 136
Y + P P++ + + + L C D++Y W N + MD
Sbjct: 81 GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF---- 136
Query: 137 INIDGGLLEITNASFADAGEYECVVKS 163
++ G L I N +D G Y C V S
Sbjct: 137 VSQTNGNLYIANVEASDKGNYSCFVSS 163
>gi|348510469|ref|XP_003442768.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1012
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 283/595 (47%), Gaps = 46/595 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
GG V + C P A+P+ W ++G + + RR I E+G L I+ +S+ D G Y+C A
Sbjct: 425 GGEVVLECRPHASPRATISWWREGGMHLKDSERRTIMEDGTLRITNISKSDGGRYTCVAR 484
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G S G L+V P+ P + + +++ L C ++ L + W NG
Sbjct: 485 NRFGTSSSTGSLVVKE-PTKIIVPPLSLDASVGQSIVLPCEVSSDSSLSPIFKWFFNGKA 543
Query: 124 IGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D N E + I GG L + N +G+Y C+V + V +S +IV GPP
Sbjct: 544 I---DFNRQEHFEM-IGGGFAGDLMVRNIQLKHSGKYVCMVHTEVDTVSAAADLIVRGPP 599
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P G+ V ++ T+ + W G N P+T Y + ART ++ W + D
Sbjct: 600 GPPEGLVVTDITDTTVQLSWGSGPDNHSPVTKYMVQARTPFSIGW-----QTVRTVPDSV 654
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G+ + L PW YEF+V+A N +G GEPS+PS Q T A P AP + GGGG
Sbjct: 655 PGQMMHATVKELNPWVDYEFRVVAINSVGVGEPSTPSKQIRTKAAVPKVAPINVSGGGGA 714
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRI 353
G+L I WEP+P E+Q+ + Y + +R + + L Y N IA + +
Sbjct: 715 RGELVIMWEPVPEEQQSGEDFGYVVAFRPLGSSTWIQTVLASPDASRYIYRNDSIAPLSL 774
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+EV V N++G GP S VV +FSAE+ P AP ++R +++ I V W P
Sbjct: 775 --------FEVTVGVYNNMGEGPFSRVVRVFSAEEEPSEAPSRAWARAVSASEIEVFWEP 826
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ R N +++ + + +W E E++ + R AL+ GL+ T+Y + V A N
Sbjct: 827 VPP-RSNSE-KIVAYEVLFW-EGGLEQSEADRV-RVINCTALLSGLKGSTRYLISVRAQN 882
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-- 531
+AG GP S + T + P +PP ++ N + + + W +V E + GYKV
Sbjct: 883 SAGLGPCSPPFNITTKKPPPSQPPGSIEWNLTN-SKIFLNWEHVKAMENESEVTGYKVVY 941
Query: 532 -RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+ W + N T + + + G+ Y + + A + GGDG S P
Sbjct: 942 RQNWHDRTTVLETNKTSLE---------LQIPSGEDYLIEIKALTEGGDGTSSGP 987
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
N+ C P+P + W K+G + + R + E G L I +S DSG+Y C A N
Sbjct: 334 ANLQWECKAIGKPRPTYRWLKNGQSLKAEERIHL-EAGRLTIPKISLSDSGMYQCVAENE 392
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCSAHTEELLDVAYIWTHNGVR 123
HG + L V+ P + + P K + R + L C H +++ W R
Sbjct: 393 HGSVYASAELKVVASPPDFTRRPVKKSTVIQRGGEVVLECRPHASPRATISW-W-----R 446
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G M L + E I ++ G L ITN S +D G Y CV ++ G S+ +++V+ P
Sbjct: 447 EGGMHLKDSERRTI-MEDGTLRITNISKSDGGRYTCVARNRFGTSSSTGSLVVKEP 501
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR-DDSGIY 58
+ +G +V + C P P W++ DGN + G+ KI + +L P R +D+G+Y
Sbjct: 237 HVSKGSSVKLECFALGNPVPSISWRRADGNPLP--GKIKINHSSGVLEIPYFRPEDAGMY 294
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
C A N G + ++G+LI H + + Q +A NLQ C A + Y
Sbjct: 295 ECVAENSRGRNVARGQLI-FHSAEHLQWVQTLKDAHMAIDANLQWECKAIGKP--RPTYR 351
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-I 175
W NG + + I+++ G L I S +D+G Y+CV ++ G + + +
Sbjct: 352 WLKNGQSLKAEE-------RIHLEAGRLTIPKISLSDSGMYQCVAENEHGSVYASAELKV 404
Query: 176 VEGPP 180
V PP
Sbjct: 405 VASPP 409
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 14/178 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATN 64
V I C + P P++ WK DG I + GNLLIS P + G+Y C ATN
Sbjct: 44 QVFINCKAKGNPPPRYRWKVDGRDINTDSDPNYSLVEGNLLISNPHVINHGGVYQCIATN 103
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+K + L ++ + +++ + + L C ++ Y W NG
Sbjct: 104 TFGTVVSREAKVQFAFLQ--NFSSKTRNTVSVREGQAVVLLCGP-PPHYGEIKYSWVFNG 160
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIV 176
R N L + I+ G L I +DAG Y C V++ + S+ T V+V
Sbjct: 161 QR--NF-LQQDARRFISQKTGNLYIAKVEASDAGNYTCAVRNMMTNSTVFSSPTPVVV 215
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 28/228 (12%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + C P + K+ W +G N + RR I + GNL I+ V D+G Y+
Sbjct: 135 EGQAVVLLCGPPPHYGEIKYSWVFNGQRNFLQQDARRFISQKTGNLYIAKVEASDAGNYT 194
Query: 60 CTATNVHGMDESK----------GRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCSAHT 107
C N+ M S R +V+ + P Q P + ++ +++L C A
Sbjct: 195 CAVRNM--MTNSTVFSSPTPVVVRRDVVMGEYEPKIEVQFPDTLHVSKGSSVKLECFALG 252
Query: 108 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ +++ G + +N G+LEI DAG YECV +++ G+
Sbjct: 253 NPVPSISWRRADGNPLPGKIKINH--------SSGVLEIPYFRPEDAGMYECVAENSRGR 304
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYK 214
+ +I L + + H A +QW A G+P Y+
Sbjct: 305 NVARGQLIFHSAEHLQWVQTLKDAHMAIDANLQWECKAI-GKPRPTYR 351
>gi|149714162|ref|XP_001487999.1| PREDICTED: contactin-1 isoform 2 [Equus caballus]
Length = 1008
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 416 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 475
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 476 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 534
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 535 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 594
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 595 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAKTDPPIIE---- 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 651 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 709
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 710 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 768
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 769 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPAEVGVKVLSSSEISVHW---EHVVEK 825
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 826 I---VESYQIRYWSAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 881
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 882 PSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 939
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 983
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 49 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 108
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 109 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 165
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 166 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 217
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 218 PLIPLPERTTKPYPADIVVQFKD 240
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 242 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 293
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D+ GR+ V P + E + + +L C A + + +
Sbjct: 294 DEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 352
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 353 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENTHGVI 390
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG+ +
Sbjct: 342 CVATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENTHGVIYA 392
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 393 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 447
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 448 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 494
>gi|351709949|gb|EHB12868.1| Contactin-5, partial [Heterocephalus glaber]
Length = 922
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 287/613 (46%), Gaps = 23/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +GNL I S+ D G Y C N+ G
Sbjct: 321 VIIECKPQGSPKPNISWKKGDKAVRENKRLAILPDGNLRILNASKSDEGNYVCKGENIFG 380
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 381 SAEIVASVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVNFYWTLKGQPIDFE 439
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 440 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIV 499
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 500 IVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMES 554
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I
Sbjct: 555 AMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRLIRTNEAVPKIAPTNVSGRSGRRHELVI 614
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 615 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 673
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + I+E++ GR
Sbjct: 674 GVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-GRPQ 729
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G + YWK+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 730 GFEVGYWKDMEQEDAAETVKTRGNETFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSA 789
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T + P + PS + + + V + W V P E ++GYKV + S+ +T
Sbjct: 790 TTKKSPPSQAPSNLRWEH-QGSQVSLGWEPVRPLANESEVLGYKVFYRQEGHSDSQVIET 848
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGEEKEFKSGSPAL 604
P +V L Y + + A+S GGDG +SS ++ G+ +S AL
Sbjct: 849 QKPQA------VVPLPDAGVYIIEIRAYSEGGDGTVSSQIRVSSYSGGKITSAQSTLHAL 902
Query: 605 YSAST--TLLLVM 615
+S+ TLLL +
Sbjct: 903 SISSSVGTLLLAL 915
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P W K +G I G RK L I V DD+GIY C
Sbjct: 134 AAKGTTVKMECFALGNPVPTITWMKANGYIPGKSRLRK--SQAVLEIPNVQLDDAGIYEC 191
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L + P + E+L + + LQ C A + Y W N
Sbjct: 192 RAENARGKNSFRGQLQIYTYPHWVEKL-NDTQLDSGSALQWECKATGKP--RPTYRWLKN 248
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
GV + L +N G+L I + + +D+G Y+C+ ++ G I S + ++
Sbjct: 249 GVPL-------LPQNRVNTANGVLMIHSVNQSDSGMYQCLAENKYGAIYASAELKILASA 301
Query: 179 P 179
P
Sbjct: 302 P 302
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L+I V++ DSG+Y C A N +G +
Sbjct: 233 CKATGKPRPTYRWLKNGVPLLPQNRVNT-ANGVLMIHSVNQSDSGMYQCLAENKYGAIYA 291
Query: 72 KGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P++ QL I + +R + + C ++++ + G+ +
Sbjct: 292 SAELKILASAPTFALNQLKKTIIVTKNREVIIECKPQGSPKPNISW-------KKGDKAV 344
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + I DG L I NAS +D G Y C ++ G +V V+ P
Sbjct: 345 RENKRLAILPDGN-LRILNASKSDEGNYVCKGENIFGSAEIVASVSVKEP 393
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 25/225 (11%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C+P +P+ + W + + + RR I E GNL IS V D G Y
Sbjct: 31 EGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYI 90
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P +T A +++ C A
Sbjct: 91 CLVKNTVTNARVLSPPTPLTLRDDGVMGEYEPKIEVHFPFTVTAAKGTTVKMECFALGNP 150
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + ++ NG G L + + +LEI N DAG YEC ++ GK S
Sbjct: 151 VPTITWM-KANGYIPGKSRLRKSQ--------AVLEIPNVQLDDAGIYECRAENARGKNS 201
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + + P + ++ SA +QW AT G+P Y+
Sbjct: 202 FRGQLQIYTYPHWVEKLNDTQLDSGSA-LQWECKAT-GKPRPTYR 244
>gi|355763246|gb|EHH62135.1| hypothetical protein EGM_20344, partial [Macaca fascicularis]
Length = 876
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 274/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 275 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 334
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 335 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 390
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 391 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 450
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 451 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 505
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 506 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 565
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 566 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 624
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 625 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 680
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 681 RPQGFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 740
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 741 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 799
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 800 IET-----QKLQA-VVPLPDAGIYIIEVRAYSEGGDGTASS 834
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 88 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 146
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 147 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 203
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 204 VPLSSQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 256
>gi|109108423|ref|XP_001094872.1| PREDICTED: contactin-5 isoform 3 [Macaca mulatta]
Length = 1026
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 274/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 425 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 484
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 485 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 540
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 541 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 601 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 656 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 716 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 775 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 830
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 831 RPQGFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 890
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 891 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 949
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 950 IET-----QKLQA-VVPLPDAGIYIIEVRAYSEGGDGTASS 984
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 297 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 354 VPLSSQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 45 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 104
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 105 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 162 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 201
>gi|109108421|ref|XP_001094748.1| PREDICTED: contactin-5 isoform 2 [Macaca mulatta]
Length = 1100
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 274/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGIYIIEVRAYSEGGDGTASS 1058
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSSQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|355566984|gb|EHH23363.1| hypothetical protein EGK_06815, partial [Macaca mulatta]
Length = 1084
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 274/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 483 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 542
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 543 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 598
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 599 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 658
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 659 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 713
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 714 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 773
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 774 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 832
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 833 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 888
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+ A +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 889 RPQGFEVGYWKDMEQEDAAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 948
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 949 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1007
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1008 IET-----QKLQA-VVPLPDAGIYIIEVRAYSEGGDGTASS 1042
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 296 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 354
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 355 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 411
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 412 VPLSSQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 464
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 103 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 162
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 163 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 219
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 220 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 259
>gi|149714159|ref|XP_001487987.1| PREDICTED: contactin-1 isoform 1 [Equus caballus]
Length = 1019
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 427 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 486
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 487 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 545
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 546 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 605
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 606 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAKTDPPIIE---- 661
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 662 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 720
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 721 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 779
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 780 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPAEVGVKVLSSSEISVHW---EHVVEK 836
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 837 I---VESYQIRYWSAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 892
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 893 PSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 950
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 994
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 60 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 119
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 120 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 176
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 177 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 228
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 229 PLIPLPERTTKPYPADIVVQFKD 251
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 253 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 304
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D+ GR+ V P + E + + +L C A + + +
Sbjct: 305 DEGTYECEAENIRGKDKHHGRIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 363
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 364 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENTHGVI 401
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG+ +
Sbjct: 353 CVATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENTHGVIYA 403
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 404 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 458
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 459 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 505
>gi|359078211|ref|XP_002697016.2| PREDICTED: contactin-3 [Bos taurus]
Length = 1028
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 276/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK I+ R +G L I V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LL + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + + R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW E+++ A + GL+ + YY V A+N+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L W + G +
Sbjct: 398 SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS----W-----KKGEV 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 449 IVQENERTSFLNDGG-LKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEP 499
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I R K+ ++I+P D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVINPNRNWDTGNYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|334347566|ref|XP_001377637.2| PREDICTED: contactin-1 [Monodelphis domestica]
Length = 1015
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 290/592 (48%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+++G+L I ++R D G Y+C
Sbjct: 415 AAKGGRVLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIRNITRADEGTYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + G L++ LPP + N ++CSA + LD+ +IW+ N
Sbjct: 475 AENNRGKANNTGTLLITDATRI--TLPPANADVTVGENATMQCSASHDPALDLTFIWSLN 532
Query: 121 GVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G I N N ID G L I A AG Y C ++ V S ++V GP
Sbjct: 533 GYVIDFSKENSHYMRNFMIDSNGDLLIKKAQLKHAGRYTCTAQTIVDNSSASADLVVRGP 592
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 593 PGPPGGVRIEDIRDTSVALTWSRGSDNHSPISKYSIQTKTILSDDWKDAKTDPSNIE--- 649
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 650 --GNMESARAVDLIPWMEYEFRVVATNILGTGEPSLPSNRIKTEGAAPNVAPSDVGGGGG 707
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L+I+W PL RE N Y + ++ E++ T+ ++G V + +
Sbjct: 708 SNRELTITWVPLSREYHYGNNFGYIVAFKPFGGKEWKKVTVTN-PDIGRYVHKDETMSPS 766
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TE++VKV+A N+ G GP S I+SA+D P AP V + +S+ I+V+W +
Sbjct: 767 TEFQVKVKAFNNKGDGPFSLTAVIYSAQDAPSEAPTDVSIKVLSSSEISVSWKHV----- 821
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ + G++I+YW + E A + A + L PD +Y V+V AYN+AG GP
Sbjct: 822 -LEKTVEGYQIRYWAAQDKEAAAQRVQVSSQDYSAKLENLLPDMQYSVEVRAYNSAGYGP 880
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ ++ + RKAP P + + + +TW +V E + GYKV E
Sbjct: 881 PSD-VIDVSTRKAPPSQPPRIISSVRSGSRYIITWDHVKAMSNESTVTGYKVLYRPDGEH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 EGKLYSTHRHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQIKIS 982
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P D+G Y C +N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNWDIDLTNERYSMVGGNLVINNPDKLRDAGKYFCLVSN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
++GM S + Y + PP ++ + L L C D++Y W N
Sbjct: 108 IYGMVRSTEATLSF---GYLDPFPPEERAEVKVKEGIGLVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPIFITMDKRRY----VSQTNGNLYIANVEASDRGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + +++ +Q+ D
Sbjct: 217 PLIPLSDRTTKLYPADIKVQFKD 239
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W ++G + G L + ++ D++G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLRNG---------YAYHKGELRLYGLTFDNAGMYQCIAENAHGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K A + ++ + + W+ + N
Sbjct: 392 NAELKILAMAPTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
T + D G LEI N + AD G Y C ++ GK + T+++
Sbjct: 447 -STRILIWDDGSLEIRNITRADEGTYTCFAENNRGKANNTGTLLI 490
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W+K I SG KIF + +
Sbjct: 241 YALMGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D + R+ V P + E + +L C A + + +
Sbjct: 293 DEGTYECEAENIRGKDRHQARIYVQAFPEWVEHI-NDTEADIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + +F +AG Y+C+ ++ G I
Sbjct: 352 R--WLRNGYAYHK---------------GELRLYGLTFDNAGMYQCIAENAHGAI 389
>gi|426224671|ref|XP_004006492.1| PREDICTED: contactin-1 isoform 1 [Ovis aries]
gi|426224673|ref|XP_004006493.1| PREDICTED: contactin-1 isoform 2 [Ovis aries]
Length = 1018
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 195/592 (32%), Positives = 291/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ +V TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 893 SDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVRIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 400
>gi|296475002|tpg|DAA17117.1| TPA: contactin-3-like [Bos taurus]
Length = 1081
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 276/580 (47%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK I+ R +G L I V++ D+GIY+C A N
Sbjct: 477 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 536
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LL + W NG
Sbjct: 537 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 595
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 596 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 654
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 655 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 709
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 710 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 769
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + + R S ++ YE
Sbjct: 770 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 828
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P AP V + +S+ I V+WN I N G
Sbjct: 829 VKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSN--G 886
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW E+++ A + GL+ + YY V A+N+AG GP S
Sbjct: 887 HLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSAT 946
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 947 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 1005
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 1006 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 1039
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 392 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 450
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L W + G +
Sbjct: 451 SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS----W-----KKGEV 501
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 502 IVQENERTSFLNDGG-LKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEP 552
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 292 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 350
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 351 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 407
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 408 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 460
Query: 179 P 179
P
Sbjct: 461 P 461
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I R K+ ++I+P D+G Y C
Sbjct: 95 EDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVINPNRNWDTGNYQCF 154
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 155 ATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 211
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 212 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 255
>gi|426224675|ref|XP_004006494.1| PREDICTED: contactin-1 isoform 3 [Ovis aries]
Length = 1007
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 195/592 (32%), Positives = 291/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 475 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ +V TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDVRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGMGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 825 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 881
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 882 SDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 939
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 940 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVRIS 982
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPLPERTTKPYPADIVVQFKD 239
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 493
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 389
>gi|348510467|ref|XP_003442767.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1029
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 270/579 (46%), Gaps = 16/579 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ + C P+ +P W+K + R I +NG+L I V++ D+G+Y+C A N
Sbjct: 428 GGDALVECKPKMSPWGVISWRKGSEPLQETDRISILDNGSLRIWNVTKSDAGLYTCVARN 487
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ S G +IV P+ L + + ++ L C + L++ + W N I
Sbjct: 488 QFGVASSTGSIIVKE-PTVITTLASTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQLI 546
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
G + I N AG+Y C V++ V IS ++V GPPG P
Sbjct: 547 HFGSHGGFFEKVGGHSAGDIMIRNVQLRHAGKYTCAVQTKVDSISVAVDLVVRGPPGPPT 606
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
+QV + T+A++ W G N PIT Y I ART ++ W V+ EV R T
Sbjct: 607 SIQVEGITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTV---PEVVRGTRLT 663
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
I+ L PW YEF+V+A N +G GEPS PS Q T P P+ + GGGG +L
Sbjct: 664 ATVID--LSPWVEYEFRVLASNSIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSEL 721
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+WEP+P E QN P Y + +R T + + V + S ++ ++V
Sbjct: 722 VITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPS-AEASRYVFKNESIQPFSPFQV 780
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KV N++G GP V TI+SAE+ P AP V ++ +++ I V+W L + R
Sbjct: 781 KVGVYNNLGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWK--ALPWNANKKR 838
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
++G+ ++YW E+TA + + +I G++ T YYV V AYN AG GP S
Sbjct: 839 VLGYELRYWSRSEREDTASVQRTVGNQTSTIIRGVKGSTAYYVSVRAYNTAGTGPPSTTV 898
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN 544
T + P +PP V N + + + W V E + GYKV +
Sbjct: 899 NVTTKKPPPSQPPGKVVWNTSN-SKIILNWEQVKALENESEVTGYKVLYKKNRHSRPSVM 957
Query: 545 DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T NT ++ L + Y +++ F GG+G S
Sbjct: 958 ET-----NTTSVELA-LPTDEDYIIQIKPFGEGGEGSSS 990
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 143/591 (24%), Positives = 237/591 (40%), Gaps = 62/591 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + S R +G L IS ++ D+G+Y C A N HG S
Sbjct: 342 CKATGKPKPSYRWMKNGENLESTEERIQVASGVLSISRLTLTDTGMYQCVAGNKHGEVYS 401
Query: 72 KGRLIVLH-GPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ P + + QL + + + + C W R G+ L
Sbjct: 402 NAELRVIAVAPDFSHNQLRSQTLVKVGGDALVECKPKMSP-------WGVISWRKGSEPL 454
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 189
E + +I +D G L I N + +DAG Y CV ++ G S+ ++IV+ P
Sbjct: 455 QETDRISI-LDNGSLRIWNVTKSDAGLYTCVARNQFGVASSTGSIIVKEP---------T 504
Query: 190 EVHKTSATIQWTDGATNGRP--ITHYKIIARTNWNSTWFNVSEHVI-----GKEVDRYTG 242
+ ++T+ T G + P ++H + TWF +E +I G ++ G
Sbjct: 505 VITTLASTLDVTVGESVVLPCQVSHDPSL---ELKFTWF-FNEQLIHFGSHGGFFEKVGG 560
Query: 243 RK--EASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+ I NV L Y V + S S + P P+ I G
Sbjct: 561 HSAGDIMIRNVQLRHAGKYTCAVQTKVD-------SISVAVDLVVRGPPGPPTSIQVEGI 613
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY- 358
S+SW P P ++P Y I R +Q+ T G + +
Sbjct: 614 TDTTASLSWRPGP--DNHSPITAYTIQARTPFSLGWQAVTTVPEVVRGTRLTATVIDLSP 671
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P + P+V P V G + + + +TW P+ E
Sbjct: 672 WVEYEFRVLASNSIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSELVITWEPVPEE 731
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G ++ R + + P A Y+ + +QP + + VKV
Sbjct: 732 LQNGPGFGYVVAFRPHGATGWMQAAVPSAEASRYVFKNE-------SIQPFSPFQVKVGV 784
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YNN GEGP + + P + P+ V K ++ + + V+W+ + + ++ ++GY++
Sbjct: 785 YNNLGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWNANKKRVLGYEL 844
Query: 532 RVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R W +D + T VGN I + Y++ V A++ G G
Sbjct: 845 RYWSRSEREDTASVQRT---VGNQTSTIIRGVKGSTAYYVSVRAYNTAGTG 892
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 9/168 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ N+ +G L I ++D+G Y C
Sbjct: 241 HVAKGSTVKLECFALGNPAPSISWRRVDNVPFPRKVDMRKASGVLEIPYFQQEDAGTYEC 300
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N GM+ KG+L + P + + P + +L C A + +Y W N
Sbjct: 301 VAENSRGMNTVKGKL-SFYAPPHLIETPQDVQKLIDDSLAWECKATGKP--KPSYRWMKN 357
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G N++ E I + G+L I+ + D G Y+CV + G++
Sbjct: 358 G---ENLESTE---ERIQVASGVLSISRLTLTDTGMYQCVAGNKHGEV 399
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCTATNV 65
V C + +P P + W+ +G I G GNL IS +++D D+G Y C A+N
Sbjct: 49 VVFSCEAKGSPPPMYRWRLNGTEINPKTGSHYSLSGGNLRISHLNKDQDAGTYQCLASNS 108
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ Q +++ + + L C H+ +L+ + W N
Sbjct: 109 FGTIVSREASLTFAYLENFKTQRRSSVSVREGQGVVLLCGPPPHSGDLV---FSWIFNEY 165
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
D I+ + G L I +D G Y CVV +TV K V+GPP
Sbjct: 166 PTFVKQDTRRF----ISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTR------VQGPP 214
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 105/280 (37%), Gaps = 35/280 (12%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + RR I E GNL I+ V D G Y+
Sbjct: 139 EGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGNYT 198
Query: 60 CTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G +VL P Q P + +A ++L C A
Sbjct: 199 CVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPELVHVAKGSTVKLECFALGNP 258
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+++ N +D+ + G+LEI DAG YECV +++ G +
Sbjct: 259 APSISWRRVDNVPFPRKVDMRKAS--------GVLEIPYFQQEDAGTYECVAENSRGMNT 310
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
K + PP L Q V+ ++ W AT G+P Y+ W
Sbjct: 311 VKGKLSFYAPPHLIETPQDVQ-KLIDDSLAWECKAT-GKPKPSYR----------WMKNG 358
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
E++ E SI + + T ++ +AGN+ G
Sbjct: 359 ENLESTEERIQVASGVLSISRLTLT-DTGMYQCVAGNKHG 397
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE-EEPIIGYKVRVWEVDQDMSRANDTIIP 549
+ P PP+++ ++GI TT ++WR P + PI Y ++ +A T+
Sbjct: 599 RGPPGPPTSIQVEGITDTTASLSWR---PGPDNHSPITAYTIQARTPFSLGWQAVTTVPE 655
Query: 550 V--GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
V G L A ++DLSP Y RVLA ++ G G S P+
Sbjct: 656 VVRGTRLTATVIDLSPWVEYEFRVLASNSIGTGEPSKPS 694
>gi|73996774|ref|XP_534836.2| PREDICTED: contactin-1 isoform 1 [Canis lupus familiaris]
Length = 1007
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 475 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVVEK 824
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 825 I---VESYQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 880
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 881 PSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 938
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 939 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPLPERTTKPYPADIVVQFKD 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGTI 389
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGTIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 493
>gi|410964133|ref|XP_003988610.1| PREDICTED: contactin-1 isoform 1 [Felis catus]
Length = 1018
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 299/594 (50%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 486 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP-IELIRE 419
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W+ +E I E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWDHVVEKIVE 838
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEG 478
+ ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG G
Sbjct: 839 S-------YQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCG 890
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW--- 534
P S+ T + P +PP I I + + +TW +V E + GYKV
Sbjct: 891 PPSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDG 948
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 949 QHDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 400
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 504
>gi|335294754|ref|XP_003129849.2| PREDICTED: contactin-5 [Sus scrofa]
Length = 1026
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 272/582 (46%), Gaps = 19/582 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 421 KGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCQGE 480
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P + + ++ L C A + LDV + WT G
Sbjct: 481 NVFGSAEIIASISVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQP 539
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 540 IDFQKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 599
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ ++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 600 PGIVIVEEITDSTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITG 654
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 655 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRH 714
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 715 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 773
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++
Sbjct: 774 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL- 829
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G I YWK+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 830 GRPQGFEIGYWKDMEQEDAAETVKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSS 889
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + P+ + + + + + W V P E ++GYKV + S+
Sbjct: 890 EVSATTKKSPPSQAPNNLRWEQ-QGSQLSLGWEPVRPLANESEVMGYKVFYRQEGHSNSQ 948
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T P +V L Y + V A+S GGDG SS
Sbjct: 949 VIETQKPQA------VVPLPDAGVYIIEVRAYSEGGDGTASS 984
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 297 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L I + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 354 VPL-------LLQSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C A N
Sbjct: 45 VALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAANT 104
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 105 FGSVLSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 162 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 201
>gi|121583914|ref|NP_001073520.1| contactin 4 precursor [Danio rerio]
gi|115313841|gb|AAI24395.1| Zgc:153573 [Danio rerio]
Length = 1028
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 298/624 (47%), Gaps = 34/624 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EGG+V I C P+ +P+ W+K + + R + E+G+L IS VS+ D+G Y+C A
Sbjct: 425 EGGDVLIECKPKMSPRGSISWRKGNDALRESSRIAVLESGSLRISNVSKSDAGSYTCVAR 484
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-- 121
N G S G L+V P+ P + + ++ L C + L++ + W N
Sbjct: 485 NQFGEASSLGNLLVKE-PTIITTAPNTLDVTVGESIILPCQVSYDPSLELKFTWFFNEQL 543
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ G+ E G + I N AG+Y C V++ V S T +IV GPPG
Sbjct: 544 IHFGSHG-GYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSSSIATDLIVRGPPG 602
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDR 239
P + V E+ T+AT+ W G N PIT Y I ART ++ W VS V+G
Sbjct: 603 PPTSIHVEEITDTTATLSWRPGPDNHSPITAYTIQARTPFSLGWQAVSTVPEVVG----- 657
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G + L PW YEF+V+A N +G GEPS PS + T P P+ + GGGG
Sbjct: 658 --GSHLTATVIELNPWVEYEFRVLASNAVGTGEPSKPSKKARTKDTVPKVTPANVSGGGG 715
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+WEP+P E QN Y + +R T + + V + + +
Sbjct: 716 SRSELVITWEPVPEELQNGAGFGYVVAFRPFGSTGWMQAAVPS-PEASKYVFKNETILPF 774
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
+ ++VKV A N+ G GP V+TI+SAE+ P AP + ++ +++ + V+W L
Sbjct: 775 SPFQVKVGAYNNKGEGPFGPVITIYSAEEEPGRAPSRLRAKSLSASDVEVSWK--ALPWS 832
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ R++G+ ++YW+++ E+ + + R A+I GL+ + YY+ V AYN AG GP
Sbjct: 833 TSKKRVLGYELRYWEKNEKEDASSVLRTVGNRTLAIIQGLKGSSTYYITVRAYNTAGTGP 892
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P +PPS V N + + + W V P E ++GYKV
Sbjct: 893 PSPVVNITTKKPPPSQPPSKVMWNTSN-SKIILNWEQVKPLENESEVMGYKV-------- 943
Query: 540 MSRANDTIIPVGNTLDADIVDLS--PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
M R N P + V+LS + Y +++ F GG+G SS IT
Sbjct: 944 MYRRNRFSRPNVMETNTTSVELSLPTDEEYIIQIKPFGEGGEGS-SSRQITIPR------ 996
Query: 598 KSGSPALYSASTTLLLVMSSTLYI 621
SG A+ SAS+ L ST+ +
Sbjct: 997 ISGPNAIGSASSVSTLSALSTIAL 1020
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R NG L I+ ++ D G+Y C A N +G S
Sbjct: 340 CKATGKPKPSYRWMKNGENLEPTEERVQVINGALSITHLALSDIGMYQCVAGNKYGEVYS 399
Query: 72 KGRLIVLH-GPSYYE-QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ P + + QL + ++ + C +++ R GN L
Sbjct: 400 NAELRVIAVAPDFSQNQLKSHTLVKEGGDVLIECKPKMSPRGSISW-------RKGNDAL 452
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E + ++ G L I+N S +DAG Y CV ++ G+ S+ ++V+ P
Sbjct: 453 RESSRIAV-LESGSLRISNVSKSDAGSYTCVARNQFGEASSLGNLLVKEP 501
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI---FENGNLLISPVSRDDSGIYS 59
+G V + C P P W++ + G RK+ +G + I ++D+G Y
Sbjct: 241 AKGSTVRLECFALGNPVPSISWRR---VDGVPFARKVDVRKTSGVMEIPYFQQEDAGTYE 297
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + +G+L P E+ P + +L C A + +Y W
Sbjct: 298 CVAENSKGRNSVQGKLSFFASPQLIEK-PQDVQKPIDDSLVWECKATGKP--KPSYRWMK 354
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG N++ E IN G L IT+ + +D G Y+CV + G++
Sbjct: 355 NG---ENLEPTEERVQVIN---GALSITHLALSDIGMYQCVAGNKYGEV 397
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 19/179 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCTATNV 65
V C + P P + WK +G+++ G GNL I+ +++D D+G Y C A+N
Sbjct: 47 VVFSCEAQGDPPPFYRWKLNGSVVNPKPGSHHSLTGGNLRINHLNKDMDAGTYQCLASNS 106
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ +++ + + L C H+ L + W N
Sbjct: 107 FGTIVSREASLTFAYLENFKTHKRSSVSVREGQGVVLLCGPPPHSGAL---TFSWIFNEY 163
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D ++ + G L I +D G Y CVV +TV K V+GPP
Sbjct: 164 PSIVKQDSRRF----VSQETGNLYIAKVEPSDVGNYTCVVTNTVTKTQ------VQGPP 212
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 24/225 (10%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P A +++ + +I+ RR + E GNL I+ V D G Y+
Sbjct: 137 EGQGVVLLCGPPPHSGALTFSWIFNEYPSIVKQDSRRFVSQETGNLYIAKVEPSDVGNYT 196
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN + +G L + P Q P + +A ++L C A
Sbjct: 197 CVVTNTVTKTQVQGPPTPLILRTDGVMGEYEPKIEVQFPEVVQVAKGSTVRLECFALGNP 256
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ R+ + ++ G++EI DAG YECV +++ G+ S
Sbjct: 257 VPSISW------RRVDGVPF--ARKVDVRKTSGVMEIPYFQQEDAGTYECVAENSKGRNS 308
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P L Q V+ ++ W AT G+P Y+
Sbjct: 309 VQGKLSFFASPQLIEKPQDVQ-KPIDDSLVWECKAT-GKPKPSYR 351
>gi|351700526|gb|EHB03445.1| Contactin-2, partial [Heterocephalus glaber]
Length = 1024
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 270/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 414 AARGGEISIACQPRAAPKATVLWSKGTEILVNSSRLTVTPDGTLVIRNISRSDEGRYTCF 473
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 474 AENFMGKANSTGVLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 532
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I +A G YEC+ ++ V S + TV+V GPP
Sbjct: 533 FPIDFDKPGGHYRRASVKETVGDLTILSAQLRHGGTYECMAQTVVDSASKEATVLVRGPP 592
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 593 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTRPAGKWKQVRTNPANIE---- 648
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 649 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLGGGGGA 707
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 708 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNESIRPYT 766
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES T++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 767 PFEVKIRSYNRRGDGPESLTATVYSAEEEPRVAPTKVWAKGISSSEMNVTWEPVQ---QD 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 824 MNGVLLGYEIRYWKAGDKEAAADRVRTAGLETLACVTGLHPNTKYHVTVRAYNRAGTGPA 883
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V E + GYK+
Sbjct: 884 SPSTNATTMKPPPQRPPGNISWT-FSSSSLSIRWDPVVALRNESAVTGYKM 933
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + V W P+
Sbjct: 662 WMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLGGGGGAPGELIVNWTPMS-- 719
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T ++P T + VK+ +YN G
Sbjct: 720 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNESIRPYTPFEVKIRSYNRRG 779
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + P+ P+ V KGI+ + ++VTW V ++GY++R W+
Sbjct: 780 DGPESLTATVYSAEEEPRVAPTKVWAKGISSSEMNVTWEPVQQDMNGV-LLGYEIRYWKA 838
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
D A D + G A + L P +YH+ V A++ G G S
Sbjct: 839 G-DKEAAADRVRTAGLETLACVTGLHPNTKYHVTVRAYNRAGTGPAS 884
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 11/234 (4%)
Query: 254 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP+ +
Sbjct: 764 PYTPFEVKIRSYNRRGDG-PESLTATVYSAEEEPRVAPTKVWAKGISSSEMNVTWEPV-Q 821
Query: 314 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
+ N + Y+I + K D E ++ ++ G +A V T+Y V V+A N G
Sbjct: 822 QDMNGVLLGYEIRYWKAGDKEAAADRVRTAGLETLACVT--GLHPNTKYHVTVRAYNRAG 879
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S + + PQ P G S F+S+++++ W+P+ +R + G+++ Y
Sbjct: 880 TGPASPSTNATTMKPPPQ-RPPGNISWTFSSSSLSIRWDPVVALRNE--SAVTGYKMLYQ 936
Query: 434 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
+ +P T + +L T++NW I L+ V++ G+G +E ++ R
Sbjct: 937 NDLHP--TPILHL--TSKNWIEIPMLEDTGHALVQIRTTGPGGDGIPAEVHIVR 986
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 325 GANLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEV-SAGDLRFSKLSLEDSGMYQCVAEN 383
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ + +W+ G I
Sbjct: 384 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATVLWS-KGTEI 442
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
TP+ G L I N S +D G Y C ++ +GK ++ + V
Sbjct: 443 LVNSSRLTVTPD-----GTLVIRNISRSDEGRYTCFAENFMGKANSTGVLSV 489
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 234 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 290
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
A N G D +GR+IV P + + + + I A NL+ C+A + V W
Sbjct: 291 EAENSRGRDTVQGRIIVQAQPEWLKVISDTEADIGA--NLRWGCAAAGKPRPTVR--WLR 346
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 347 NGEPLASQN-------RVEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 398
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 77/184 (41%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G G R GNL+I +P D+G+Y C A+N
Sbjct: 40 QVTLVCRARASPPATYRWKMNGTEMNLGLGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 99
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G S+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 100 PVGTVVSREGVLRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 152
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 153 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 199
Query: 169 STKT 172
STK+
Sbjct: 200 STKS 203
>gi|73996768|ref|XP_851830.1| PREDICTED: contactin-1 isoform 3 [Canis lupus familiaris]
Length = 1018
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 486 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 891
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 892 PSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 949
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 950 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGTI 400
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGTIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 504
>gi|444516815|gb|ELV11290.1| Contactin-1, partial [Tupaia chinensis]
Length = 886
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 298/594 (50%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D G+Y+C
Sbjct: 304 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGVYTCF 363
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 364 AENNRGKANSTGTLVIT-DPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 422
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 423 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 482
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 483 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 538
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 539 -GNMEAAKAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGS 597
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ G V + + T
Sbjct: 598 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGVEWKKVTVTN-PETGRYVHKDETMSPST 656
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRE 419
++VKV+A N G GP S + I SA+D P AP V + +S+ I+V W + +E I E
Sbjct: 657 AFQVKVKAFNSKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVE 716
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEG 478
+ ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG G
Sbjct: 717 S-------YQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVGACNSAGCG 768
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW--- 534
P S+ T + P +PP I I + + +TW +V E + GYKV
Sbjct: 769 PPSDVIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDG 826
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 827 QHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 871
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 130 YTLMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 181
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 182 DEGLYECEAENIKGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 240
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 241 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 278
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 230 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 280
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 281 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 335
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 336 --SSRILIWEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVITDP 382
>gi|292626879|ref|XP_697914.4| PREDICTED: contactin-4-like [Danio rerio]
Length = 1028
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 177/626 (28%), Positives = 290/626 (46%), Gaps = 25/626 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG+V I C P +P+ W+K + R + +NG+L IS +++ D+G+Y+C
Sbjct: 424 ARQGGDVLIECRPRMSPRGMISWRKGKEALRESHRVSVLDNGSLRISNITKLDAGLYTCV 483
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G+ S G L+V P+ ++ + ++ + C + LDV + W N
Sbjct: 484 ARNQFGVASSAGTLVVKE-PTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFNE 542
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I G + I N AG Y C V++ V S T V+V GPP
Sbjct: 543 QLINFGSHGGYFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPPD 602
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P ++V EV +T++ + W+ G N P+ Y I R+ ++ W K V
Sbjct: 603 PPLDIRVDEVTETTSFVSWSPGPDNHSPVFAYNIQIRSPFSLGW------QAAKTVPESL 656
Query: 242 GRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G +++S V L PW YEF+V+A N +G GEP+ PS + T P P+R+ GGGG
Sbjct: 657 GGQQSSARVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGS 716
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WEP+P E+Q P Y + +R + + + + + S ++
Sbjct: 717 RSELVITWEPVPEEQQAGPGFGYVVAFRPLGGQNWMQAAVTS-PDASRYIFKNDSIPPFS 775
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+ VKV N+ G GP V TI+SAE+ P AP + ++ +++ + V+W P+
Sbjct: 776 PFHVKVGVYNNKGEGPFGPVTTIYSAEEEPSRAPSRIRAKSLSASEVEVSWKPLPW--ST 833
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
R R++G+ ++YW + +TA + R A+I GL P + Y +K+ AYN+AG GP+
Sbjct: 834 SRTRIMGYELRYWSTKDRPDTASVMRTVGNRTSAVIRGLDPSSTYNIKLKAYNSAGVGPD 893
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ-- 538
S T R P + P V + + + W +V E ++GYKV + Q
Sbjct: 894 SAVVNVTTKRPPPSQSPVKVMWNTTDSKLI-LKWDHVKALENESEVMGYKVMYKQSRQTR 952
Query: 539 -DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+ N T + + +D D Y +++ S GG+G SS IT
Sbjct: 953 PSVVETNSTSLELSLPVDED---------YIIQIKPVSEGGEGS-SSKQITIPRIAVAHA 1002
Query: 598 KSGSPALYSASTTLLLVMSSTLYIFV 623
+P + + LV+ T+ F+
Sbjct: 1003 IGFAPERKALPVFVTLVLHCTVRTFL 1028
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 137/600 (22%), Positives = 241/600 (40%), Gaps = 80/600 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C A PKP + W K+G + S R NG L IS ++ D+G+Y C A N HG +
Sbjct: 341 CKASAKPKPSYRWLKNGEPLESFEDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFA 400
Query: 72 KGRLIVLH-GPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ P + + T+A ++ + C +++ R G L
Sbjct: 401 NAELRVIAVAPDFSNSVLKAQTLARQGGDVLIECRPRMSPRGMISW-------RKGKEAL 453
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 189
E ++ +D G L I+N + DAG Y CV ++ G S+ T++V+ P + +
Sbjct: 454 RESHRVSV-LDNGSLRISNITKLDAGLYTCVARNQFGVASSAGTLVVKEPTIITSKATQL 512
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNW--NSTWFNVSEH---------------V 232
+V + + + + + R W N N H +
Sbjct: 513 DVTVGESVVIPCQVSRDP------SLDVRFTWFFNEQLINFGSHGGYFEKVGGASAGDIM 566
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
I R+ GR +++ + S V+ G P P + D+ + S
Sbjct: 567 IRNIQLRHAGRYTCAVQTKVDSASIATDVVVRG---------PPDPPLDIRVDEVTETTS 617
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-SETLKEYGNVGIAVV 351
+SW P P ++P Y I R +Q ++T+ E +
Sbjct: 618 ------------FVSWSPGP--DNHSPVFAYNIQIRSPFSLGWQAAKTVPESLGGQQSSA 663
Query: 352 RIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
R+ + EYE +V A N +G G P I + + MP++ P V G + + + +T
Sbjct: 664 RVVELSPWVEYEFRVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGSRSELVIT 723
Query: 411 WNPIELIRENIRGRLIGHRIKY-------WKE---DNPEETAVYYLSRTTRNWALIVGLQ 460
W P+ E G G+ + + W + +P+ + + + + +
Sbjct: 724 WEPVP--EEQQAGPGFGYVVAFRPLGGQNWMQAAVTSPDASRYIFKNDS---------IP 772
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + ++VKV YNN GEGP + + P + PS + K ++ + V V+W+ + S
Sbjct: 773 PFSPFHVKVGVYNNKGEGPFGPVTTIYSAEEEPSRAPSRIRAKSLSASEVEVSWKPLPWS 832
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
I+GY++R W +D + VGN A I L P Y++++ A+++ G G
Sbjct: 833 TSRTRIMGYELRYWST-KDRPDTASVMRTVGNRTSAVIRGLDPSSTYNIKLKAYNSAGVG 891
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G V + C P P W++ + +G L I ++D+G Y C A
Sbjct: 242 AKGLTVKLECFALGNPVPAISWRRPDGVPFPRKVDVSKSSGVLEIPYFQQEDAGPYECVA 301
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + KGRL + P + + P + A +L C A + +Y W NG
Sbjct: 302 ENSRGKNTGKGRL-SFYAPPHLVEKPQDVQRAIDESLLWECKASAKP--KPSYRWLKNGE 358
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ + + I + G L I++ + +D G Y+C+ ++ G++
Sbjct: 359 PLESFE------DRIQVINGALSISSLTLSDTGMYQCIAENRHGRV 398
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSR-DDSGIYSCTATNV 65
VT C + P P + WK + + I G R GNL IS +++ +D+GIY C A+N
Sbjct: 48 VTFSCEAQGRPPPSYRWKMNDSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNS 107
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + + + Q+ + + + + L C A+ EL + W N
Sbjct: 108 FGTILSREASLHIAYLEEFKTQMRSPVRVREGQGVVLLCGPPAYMGEL---TFSWIFNEY 164
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
D ++ G L I +D G Y CVV +TV T V+GPP
Sbjct: 165 PSFVEQDTRRF----VSQKTGNLYIAKVEPSDVGNYTCVVTNTV------TQNRVQGPP 213
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 24/194 (12%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + C P A + F W + + + RR + + GNL I+ V D G Y+
Sbjct: 138 EGQGVVLLCGPPAYMGELTFSWIFNEYPSFVEQDTRRFVSQKTGNLYIAKVEPSDVGNYT 197
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN + +G L + P Q P + +A ++L C A
Sbjct: 198 CVVTNTVTQNRVQGPPTPLILRSDGIMGEYEPKIEVQFPEVLAVAKGLTVKLECFALGNP 257
Query: 110 LLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ ++ W +GV +++ G+LEI DAG YECV +++ GK
Sbjct: 258 VPAIS--WRRPDGVPFPRKV-------DVSKSSGVLEIPYFQQEDAGPYECVAENSRGKN 308
Query: 169 STKTTVIVEGPPGL 182
+ K + PP L
Sbjct: 309 TGKGRLSFYAPPHL 322
>gi|410964135|ref|XP_003988611.1| PREDICTED: contactin-1 isoform 2 [Felis catus]
Length = 1007
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 299/594 (50%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 415 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 474
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 475 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 533
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 534 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 593
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 594 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 649
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 650 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNRIKTDGAAPNVAPSDVGGGGGS 708
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 709 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 767
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP-IELIRE 419
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W+ +E I E
Sbjct: 768 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWDHVVEKIVE 827
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEG 478
+ ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG G
Sbjct: 828 S-------YQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCG 879
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW--- 534
P S+ T + P +PP I I + + +TW +V E + GYKV
Sbjct: 880 PPSDMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDG 937
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 938 QHDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 982
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 48 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 107
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 108 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 164
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 165 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 216
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 217 PLIPLPERTTKPYPADIVVQFKD 239
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 241 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 292
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 293 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 351
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 352 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 389
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 341 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 391
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 392 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 446
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 447 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 493
>gi|350584500|ref|XP_003355665.2| PREDICTED: contactin-1-like isoform 2 [Sus scrofa]
Length = 1018
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 297/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF+W K + + R I+E+G+L I+ ++R+D G Y+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFLWSKGTERLVNSSRILIWEDGSLEINNITRNDGGTYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYNIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 891
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 892 PSDMIETFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 949
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 950 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFLWSKGTERLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C V++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGTYTCFVENNKGKANSTGTLVITDP 504
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGTYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 400
>gi|345787930|ref|XP_542227.3| PREDICTED: contactin-5 [Canis lupus familiaris]
Length = 1100
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 190/622 (30%), Positives = 289/622 (46%), Gaps = 25/622 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+ +PKP WKK + R +G+L I S+ D G Y C
Sbjct: 495 KGQEVVIECKPQGSPKPTISWKKGDKAVRENKRIANLPDGSLRILNASKSDEGKYVCQGE 554
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P + + ++ L C A + LD+ + WT G
Sbjct: 555 NVFGSSEIIASVSVKE-PTKIELTPKRTELTVGESIVLNCKAIHDASLDITFYWTLKGQP 613
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 614 IDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 673
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 674 PGVVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTIPEIITG 728
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 729 DLESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRH 788
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 789 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 847
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++
Sbjct: 848 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL- 903
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + YWK+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 904 GRPQGFEVGYWKDMEQEDAAETVKTRANESSVILTGLEGNTLYHFTVRAYNGAGYGPPSS 963
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + PS + + + + + W V P E ++GYKV + S+
Sbjct: 964 EVRATTKKSPPSQAPSNLRWEQ-QGSQLSLGWEPVRPLTNESDVMGYKVFYRQEGHSNSQ 1022
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGE----EKE 596
+T P IV L Y + V A+S GGDG SS ++ G+ +
Sbjct: 1023 VIETQKPQA------IVPLPDAGVYVIEVRAYSEGGDGTASSQIRVPSYSGGKITSAQST 1076
Query: 597 FKSGSPALYSASTTLLLVMSST 618
+ SP+ S + L L++ ST
Sbjct: 1077 LHTVSPSSLSITLLLALMIPST 1098
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+G+Y C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGLYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + LQ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + N +E N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPL--LPQNRIEMVN-----GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + P P + W ++G I S R + + ++ +P DSG Y C
Sbjct: 115 EEKKVALNCEAHSNPVPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPGEAKDSGHYQCL 174
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
A N G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 175 AVNTLGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWV 231
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 232 FNEF---PSFVVEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|301778243|ref|XP_002924539.1| PREDICTED: contactin-1-like [Ailuropoda melanoleuca]
Length = 1121
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 529 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 588
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 589 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 647
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 648 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 707
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 708 GPPGGLRIEDIRATSVALSWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 763
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 764 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 822
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 823 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 881
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 882 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVVEK 938
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 939 I---VESYQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 994
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 995 PSDMIEIFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 1052
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 1053 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 1096
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 162 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 221
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 222 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 278
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 279 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 330
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 331 PLIPLPERTTKPYPADIVVQFKD 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 355 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 406
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 407 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 465
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 466 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 503
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 455 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 505
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 506 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 560
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 561 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 607
>gi|410899609|ref|XP_003963289.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1027
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 278/595 (46%), Gaps = 41/595 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG+V I C P +P+ W+K + R + +NG+L IS V+R D G+Y+C
Sbjct: 424 ARQGGDVLIECKPRMSPRGIISWRKGKEALRENHRVTVLDNGSLRISNVTRLDDGLYTCV 483
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G+ S G L+V P+ + + ++ L C + L++ + W N
Sbjct: 484 ARNQFGVASSAGSLLVKE-PTAITSPAGHLDVTVGESIVLPCQVSHDPTLELKFTWFFNE 542
Query: 122 --VRIGNM-DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ GN+ E G + I N AG+Y C V++ V +S T V+V G
Sbjct: 543 QLIHFGNLWAFFEKVGGVSERSSGDIMIRNIQPKHAGKYTCAVQTKVDSVSIATDVVVRG 602
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PG +V V + +A++ W GA N PI Y I ART + W V+ V
Sbjct: 603 PPGPPGDCRVTAVTENTASVSWAPGADNYSPILSYAIQARTPFFLGWQAVNT------VP 656
Query: 239 RYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ G K+ S + L PW YEF+V+A N +G GEPS PS + T P P+R+ GG
Sbjct: 657 KLLGGKQLSATVIDLNPWVEYEFRVLATNSIGTGEPSRPSKKARTRETPPRVTPARVNGG 716
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L I+WEP+P E Q+ Y + +R L G + AV +
Sbjct: 717 GGGHSELVITWEPVPEELQSGSGFGYVVAFRP----------LGAQGWMQAAVTSPEASR 766
Query: 358 Y---------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
Y ++ Y+VKV N+ G GP S V TI SAE+ P AP + +R +++ +
Sbjct: 767 YVFKNESIPPFSPYQVKVGVYNNRGEGPFSPVTTIHSAEEEPSRAPGRLRARSVSASEVE 826
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
VTW P+ R++G+ ++YW E +TA + + LI L+ YYV
Sbjct: 827 VTWKPLAWSNR----RILGYELQYWSERQKPDTASVIRTVGNKTSVLIRDLEGRCTYYVS 882
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ AYN+AG GP+S T + P + P + N + V + W V E + G
Sbjct: 883 LRAYNSAGVGPQSNTVNVTTKKPPPSQAPGKIMWNTSN-SKVILRWDQVHALENESEVTG 941
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
YKV QD + +L+ + L + Y +++ FS GG+GR S
Sbjct: 942 YKVM---YSQDKHSRPSVVETNSTSLE---LSLPVNQDYVIQIKPFSEGGEGRSS 990
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R NG L I+ ++ D G+Y C A N HG +
Sbjct: 341 CKANGKPKPSYRWLKNGEPLDHMEDRLQVNNGVLNITSLNLADIGMYQCVAENRHGRVFT 400
Query: 72 KGRL-IVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +V P + + L T+A ++ + C +++ R G L
Sbjct: 401 NAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPRMSPRGIISW-------RKGKEAL 453
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
E + +D G L I+N + D G Y CV ++ G S+ +++V+ P +
Sbjct: 454 RENHRVTV-LDNGSLRISNVTRLDDGLYTCVARNQFGVASSAGSLLVKEPTAI 505
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + C P + K+++ + + + RR + + GNL I+ V D G Y+
Sbjct: 138 EGQGVVLLCGPPSHSGELTFKWIFNEYPSFVTQDTRRFVSQKTGNLYIAKVDPSDVGNYT 197
Query: 60 CTATNVHGMDESKG-------RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G R+ + G P Q P + +A ++L C A
Sbjct: 198 CVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGNP 257
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ G G ++N G+LEI DAG YECV +++ G+
Sbjct: 258 VPTISW-RREGGASFG-------RKVDVNKASGVLEIPYFQMEDAGVYECVAENSRGRNL 309
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYK 214
K + P L Q +V KT T+ W + NG+P Y+
Sbjct: 310 VKGKLSFYAAPQLTEKPQ--DVQKTIDDTLVW-ECKANGKPKPSYR 352
>gi|348514832|ref|XP_003444944.1| PREDICTED: contactin-4-like [Oreochromis niloticus]
Length = 1003
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 295/592 (49%), Gaps = 24/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG+V I C P+ +P+ W+K + R + +NG+L IS VS+ D+G+Y+C
Sbjct: 398 ARQGGDVLIECKPKMSPRGMISWRKGKEALRESHRVMVLDNGSLRISNVSKTDAGMYTCV 457
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G+ S G L+V + + + ++ L C + LD+ + W N
Sbjct: 458 ARNQFGVASSAGSLLVKEA-TVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWFFNE 516
Query: 122 --VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G+ + DG ++ I N AG+Y C V++ V +S T V+V GP
Sbjct: 517 QLIHFGSHGAYFEKVGGQRSDGDIM-IRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRGP 575
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEV 237
PG P QV ++ +T+A++ W G+ N PI Y I ART ++ W V+ ++G
Sbjct: 576 PGPPVDCQVTKMTETTASLSWGPGSDNHSPILSYTIQARTPFSLGWQAVTTVPELLG--- 632
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G++ ++ L W YEF+V+A N +G GEPS PS + T P P+R+ GG
Sbjct: 633 ----GKQLSATVTDLSSWVDYEFRVLATNSIGTGEPSKPSKKARTKDTLPRVTPARVSGG 688
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L I+WEP+P E Q+ P Y + +R + + + V + S
Sbjct: 689 GGGRSELVITWEPVPEEMQSGPGFGYVVAFRPLGAQGWMQAAVTS-PDASRYVFKNESIP 747
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++ Y+VKV N+ G GP S V TI+SAE+ P AP + +R +++ + VTW P+
Sbjct: 748 PFSPYQVKVGVYNNKGEGPFSPVTTIYSAEEEPSRAPGRLRARSVSASEVEVTWKPLPW- 806
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
N R R++G+ ++YW E +E A + + LI L+ + YYV + AYN+AG
Sbjct: 807 -SNNRRRILGYELQYWSEKQKQEAATVIRTAGNKTSVLIRDLEGSSTYYVCLRAYNSAGV 865
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP+S T + P + P + N + V + W V E + GYKV ++ D
Sbjct: 866 GPQSNIVNVTTKKPPPSQAPVKIMWNTSN-SKVILKWDQVHALENESEVTGYKV-MYSQD 923
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ SR N ++ NT + + L + Y +++ FS GG+G +SS IT
Sbjct: 924 KH-SRPN--VVETNNT--SLELSLPVNQGYVIQIKPFSEGGEG-ISSRQITI 969
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R NG L IS ++ D G++ C A N HG +
Sbjct: 315 CKASGKPKPSYRWLKNGEPLDPMEDRVQVNNGVLTISSLNLADIGMFQCVAENKHGRIFT 374
Query: 72 KGRL-IVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +V P + + L T+A ++ + C +++ R G L
Sbjct: 375 NAELRVVAIAPDFSQNLLKAQTLARQGGDVLIECKPKMSPRGMISW-------RKGKEAL 427
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
E + +D G L I+N S DAG Y CV ++ G S+ +++V+
Sbjct: 428 RESHRVMV-LDNGSLRISNVSKTDAGMYTCVARNQFGVASSAGSLLVK 474
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 80/194 (41%), Gaps = 36/194 (18%)
Query: 2 AGEGGNVTIF-CNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIY 58
+GE +F C + P P + WK D I G R GNL I+ ++++ D GIY
Sbjct: 15 SGESRREVVFSCEAQGHPPPFYRWKLNDSFITPRPGSRYSLMGGNLHIAHLNKEEDVGIY 74
Query: 59 SCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAY 115
C A+N G S+ L V + ++ Q + + + + L C H+ EL ++
Sbjct: 75 QCMASNSFGTIVSREASLHVAYLENFKTQRRSPVRVREGQGVVLLCGPPPHSGEL---SF 131
Query: 116 IWTHNGVRIGNMDLNELETPNINIDG---------GLLEITNASFADAGEYECVVKSTVG 166
W N E P+ I G L I +D G Y CVV +TV
Sbjct: 132 TWIFN------------EHPSYVIQDTRRFVSQKTGNLYIAKVEPSDVGNYTCVVTNTVT 179
Query: 167 KISTKTTVIVEGPP 180
K S VEGPP
Sbjct: 180 KSS------VEGPP 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 26/226 (11%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW---KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
EG V + C P + + F W + +I R + GNL I+ V D G Y+
Sbjct: 112 EGQGVVLLCGPPPHSGELSFTWIFNEHPSYVIQDTRRFVSQKTGNLYIAKVEPSDVGNYT 171
Query: 60 CTATNVHGMDESKG-------RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G R+ + G P Q P + +A ++L C A
Sbjct: 172 CVVTNTVTKSSVEGPPTPLVLRVDGVMGEYEPKIEVQFPEVVPVAKSSTVKLECFALGNP 231
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ +D+N+ G+LEI DAG YECV +++ GK S
Sbjct: 232 VPTISWKKVDGASFTRKVDINKA--------SGVLEIPYFQQEDAGMYECVAENSRGKNS 283
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYK 214
K + P Q +V KT T+ W A+ G+P Y+
Sbjct: 284 VKGKLSYYAAPHFTEKPQ--DVQKTIDETLVWECKAS-GKPKPSYR 326
>gi|441665511|ref|XP_004091817.1| PREDICTED: LOW QUALITY PROTEIN: contactin-6 [Nomascus leucogenys]
Length = 1018
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/631 (30%), Positives = 293/631 (46%), Gaps = 41/631 (6%)
Query: 7 NVTIFCN-----PEAAPKPKFVWK---KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
++ CN P P WK + S R + E+G+L I V+R D+G Y
Sbjct: 408 DILTSCNYTXSQPNFFPNMAIAWKVGEGSQTLRKSHNRIFLLEDGSLKIHNVTRSDAGSY 467
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C ATN G ++ G LIV + P K+ + ++ L C A + +DV ++W
Sbjct: 468 TCIATNQFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQASHDPSIDVVFVWF 526
Query: 119 HNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
NG I DL + I G G L I N +G+Y C V++T+ +S +I
Sbjct: 527 FNGDVI---DLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVQTTLESLSAVADII 583
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V GPPG P V+V ++ T++ + W G N PI + I RT ++ W +
Sbjct: 584 VRGPPGPPEDVKVEDISSTTSQLSWRAGPDNNSPIQIFAIQTRTPFSVGW-----QAVAT 638
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ G+ ++ L PW YEF+V+AGN +G GEPS PS T A P AP I
Sbjct: 639 VPEILNGKTYSATVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPVNIN 698
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
GGGG +L I+WE +P E QN Y I +R T + E + + V R S
Sbjct: 699 GGGGSRSELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVASVESSRF-VYRNES 757
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ +EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I
Sbjct: 758 IIPLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIA 817
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAY 472
R GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AY
Sbjct: 818 WNRNT--GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAY 872
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N AG GP S T + P +PP+ + K N + + + W +V E ++GYK+
Sbjct: 873 NTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKIL 931
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQM 591
+ Q + +T N A++ L P + Y + + S+GGDG S ++
Sbjct: 932 YRQNRQSKTHVLET-----NNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRI 981
Query: 592 GEEKEFKSGSPALYSASTTLLLVMSSTLYIF 622
S + ST L ++ Y F
Sbjct: 982 PRMSSLSSRGIQVLEPSTHFLSIVIVIFYCF 1012
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 230 AAKDSSVKLECFALGNPVPDISWRRLDGSSLP--GKVKYSKSQAILEIPNFQQEDEGSYE 287
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 288 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDNLLWECKASGKP--NPWYTWLK 344
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 345 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 381
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 330 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 388
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE---LLDVAYIWTHNGVRIGNMD 128
L VL Y Q ++ C+ + ++A W V G+
Sbjct: 389 NAELRVLGKSFIYNQ-------QIQNDILTSCNYTXSQPNFFPNMAIAWK---VGEGSQT 438
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
L + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 439 LRKSHNRIFLLEDGSLKIHNVTRSDAGSYTCIATNQFGTAKNTGSLIVK 487
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L IS P + D G+Y C ATN+
Sbjct: 37 VILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAISSPHTDQDIGMYQCLATNL 96
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 97 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 152
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 153 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 202
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 127 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 182
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 183 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 242
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 243 LGNPVPDISWRRLDGSSLPGKVKYSKSQ--------AILEIPNFQQEDEGSYECIASNLR 294
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 295 GRNLAKGQLIFYAPP 309
>gi|44890693|gb|AAH66864.1| Cntn1 protein [Mus musculus]
gi|148672348|gb|EDL04295.1| contactin 1 [Mus musculus]
Length = 1020
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 303/594 (51%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVVIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ D + + I V D + Y + V A S+GGDG +S I
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKI 994
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+G+Y C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCIATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENAYGSI 400
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CIATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENAYGSIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVVIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
>gi|74183690|dbj|BAE24464.1| unnamed protein product [Mus musculus]
Length = 585
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 271/560 (48%), Gaps = 18/560 (3%)
Query: 25 KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYY 84
KK ++ R +G L I V++ D+G Y+CTA N G L+V P+
Sbjct: 1 KKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTE-PTRI 59
Query: 85 EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGL 143
P + +A ++ L C + LLD+ + W NG D + E + G L
Sbjct: 60 ILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDL 119
Query: 144 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDG 203
+ I N +G+Y C+V++ V +S+ +IV G PG P V+V E+ T+A + WT+G
Sbjct: 120 M-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEG 178
Query: 204 ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVI 263
+ P+ Y + ART ++ W +V + + +D G+ + L PW YEF+++
Sbjct: 179 TDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GKTHTATVVELNPWVEYEFRIV 233
Query: 264 AGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYY 323
A N++G GEPS PS + T P APS + GGGG +L I+W+P+P E QN Y
Sbjct: 234 ASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGY 293
Query: 324 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383
+ +R T + + N V R S ++ YEVKV N+ G GP S V T+
Sbjct: 294 VVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTV 352
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
FSAE+ P VAP + + +S+ I V+WN I N G L+G+ ++YW EE++
Sbjct: 353 FSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSN--GHLLGYEVRYWNNGGEEESSR 410
Query: 444 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 503
+ A++ GL+ + YY V AYN+AG GP S T + P +PP V +
Sbjct: 411 KVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNV-VW 469
Query: 504 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 563
T V + W V E + GYKV Q+ +T N A+++ L
Sbjct: 470 NATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHVLNT-----NKTSAELL-LPI 523
Query: 564 GKRYHMRVLAFSNGGDGRMS 583
+ Y + V A ++GGDG S
Sbjct: 524 KEDYIIEVKATTDGGDGTSS 543
>gi|281337428|gb|EFB13012.1| hypothetical protein PANDA_013904 [Ailuropoda melanoleuca]
Length = 967
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 298/593 (50%), Gaps = 31/593 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 395 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 454
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G L++ P+ P I N ++C+A + LD+ +IW+ NG
Sbjct: 455 AENNRGRANNTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFIWSFNG 513
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 514 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 573
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 574 GPPGGLRIEDIRATSVALSWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 629
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 630 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 688
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 689 NRELTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 747
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 748 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVVEK 804
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGP 479
I + ++I+YW + +E A + + T++ + A + L PDT+Y+V+V A N+AG GP
Sbjct: 805 I---VESYQIRYWAAHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGP 860
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---E 535
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 861 PSDMIEIFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQ 918
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 919 HDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 962
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 28 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 87
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 88 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 144
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 145 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 196
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 197 PLIPLPERTTKPYPADIVVQFKD 219
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 221 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 272
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 273 DEGTYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 331
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 332 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 369
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 321 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 371
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 372 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 426
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ G+ + T+++ P
Sbjct: 427 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGRANNTGTLVITDP 473
>gi|431913510|gb|ELK15185.1| Contactin-6 [Pteropus alecto]
Length = 725
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 178/584 (30%), Positives = 282/584 (48%), Gaps = 26/584 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+VTI C P A P+ WK+ + + R + E+G+L + V+R D+G Y+CTATN
Sbjct: 120 GGDVTIDCKPTAFPRAAISWKRGTSSLRPSRRVYVSEDGSLAMHNVTRSDAGPYTCTATN 179
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + G L+V + P + + ++ L C + ++VA++W+ +G I
Sbjct: 180 QFGVAKDTGGLVVKER-TVITVPPAPMDVTVGESIVLPCQVSHDPSVEVAFVWSFDGHVI 238
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + + G G L I N +G+Y C VK+T+ +S VIV GPPG
Sbjct: 239 ---DLKKEVAHFERLGGESIGDLMIRNIQLNHSGKYLCAVKTTLESLSAAADVIVRGPPG 295
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V V V T++ + W GA N PI + + ART ++ W VS + +
Sbjct: 296 PPEDVSVEHVSSTTSQLSWRPGADNNSPIQLFTVQARTPFSVGWQAVS-----TVPEILS 350
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS S T A P AP+ + GGGG
Sbjct: 351 GKTRNATVVGLSPWVEYEFRVVAGNSIGIGEPSESSEPLRTKASVPVVAPTNVDGGGGGR 410
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E Q+ Y + R + + + + V R S +
Sbjct: 411 SELVITWESIPEELQSGGEFGYLVLLRPAGSAAWTEQRVPAVESCRF-VYRNESIAPLSP 469
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EV+V N G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 470 FEVQVGVYNAEGDGALSAVAIVYSGEDEPQLAPRGTSVQSFSASEVEVSWNAIAWNRST- 528
Query: 422 RGRLIGHRIKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
GR++G+ + YW + +P + T I GL+ +T Y+ V AYN G GP
Sbjct: 529 -GRVLGYEVLYWTDGARDPMVGKIRVSGNVTSK--TITGLKANTVYFAAVRAYNTGGAGP 585
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 586 ASPPVNITTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQS 644
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ +T N A+++ + + Y + + S+GGDG S
Sbjct: 645 KTHVLET-----NHTSAELL-VPLEEDYLVEIRTVSDGGDGSSS 682
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 14/175 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P++ W K+G ++ G R + ENG L+I+ ++ DSG+Y C A N M +
Sbjct: 35 CKASGKPSPRYTWFKNGELLRPGERIHV-ENGTLIIATLNASDSGVYQCAAENEFQMIYA 93
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K T H + A W + G L
Sbjct: 94 NAELRVLASAPDFSKNPIKKTSVVHVGGDVTIDCKPTAFPRAAISW-----KRGTSSLRP 148
Query: 132 LETPNINIDGGLLEITNASFADAGEYEC-------VVKSTVGKISTKTTVIVEGP 179
++ DG L + N + +DAG Y C V K T G + + TVI P
Sbjct: 149 SRRVYVSEDGS-LAMHNVTRSDAGPYTCTATNQFGVAKDTGGLVVKERTVITVPP 202
>gi|6680954|ref|NP_031753.1| contactin-1 precursor [Mus musculus]
gi|227497224|ref|NP_001153119.1| contactin-1 precursor [Mus musculus]
gi|227497226|ref|NP_001153120.1| contactin-1 precursor [Mus musculus]
gi|116918|sp|P12960.1|CNTN1_MOUSE RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|50938|emb|CAA33075.1| F3 preprotein (AA -20 to 1000) [Mus musculus]
Length = 1020
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 303/594 (51%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ D + + I V D + Y + V A S+GGDG +S I
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKI 994
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+G+Y C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCIATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENAYGSI 400
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CIATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENAYGSIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
>gi|296487720|tpg|DAA29833.1| TPA: contactin-1 precursor [Bos taurus]
Length = 1018
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 290/592 (48%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKP F+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMIETFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 504
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 400
>gi|1095168|prf||2107324A neural adhesion molecule F3
Length = 1021
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 304/595 (51%), Gaps = 33/595 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S + I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 995
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENAYGTI 400
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENAYGTIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
>gi|440905205|gb|ELR55618.1| Contactin-1, partial [Bos grunniens mutus]
Length = 987
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 290/592 (48%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKP F+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 395 AAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 454
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 455 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 513
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 514 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 573
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 574 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 629
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 630 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 688
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 689 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 747
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 748 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 804
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 805 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 861
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 862 SDMIETFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 919
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 920 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 962
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 28 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQQDAGIYYCLASN 87
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 88 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 144
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 145 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 196
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 197 PLIPLPERTTKPYPADIVVQFKD 219
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 321 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 371
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 372 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVN----- 426
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 427 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 473
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 221 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 272
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 273 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 331
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 332 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 369
>gi|16923964|ref|NP_476459.1| contactin-1 precursor [Rattus norvegicus]
gi|17432928|sp|Q63198.2|CNTN1_RAT RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|1498194|dbj|BAA07504.1| F3 [Rattus norvegicus]
gi|149017608|gb|EDL76612.1| contactin 1 [Rattus norvegicus]
Length = 1021
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 304/595 (51%), Gaps = 33/595 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S + I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 995
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENAYGTI 400
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENAYGTIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
>gi|190339368|gb|AAI62590.1| Contactin 2 [Danio rerio]
Length = 1040
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 272/539 (50%), Gaps = 27/539 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V + C P AAPKP W + ++ + R + +G L I +SR D G Y+C
Sbjct: 431 AARGGQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIYNISRADEGKYTCF 490
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N L+C A + +D+ + W+ NG
Sbjct: 491 AENYLGKANSTGHLSVRDA-TKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNG 549
Query: 122 VRIGNMDLNELETPNIN---IDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
V + +LE PN + ++G G L I N + AG Y C ++ V +
Sbjct: 550 VPL------DLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKL 603
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
+V GPPG PGG+ V V+ TS ++W+ G N PI Y I+ R++ W +
Sbjct: 604 VVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRMRTDPAN 663
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E G E++ L PW YEF+VIA N LG GEPS PSP+ T P APS +
Sbjct: 664 IE-----GNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGL 718
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--VVR 352
GGGGG +L I+W P+ RE QN + Y + +RK+ + T+ + NV + V
Sbjct: 719 GGGGGNRNELIITWTPMAREYQNGDSFGYILAFRKQG---IPTWTVVKVPNVESSRYVYS 775
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
S Y +EV+++A N G GP S++ + SAE+ P V+P+ + + + I V+W
Sbjct: 776 NDSLTAYCPFEVRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRRINATALTAFEIQVSWE 835
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
PI+ + NI G L G+ I+YW++ E A + N A + GL+P+T Y++ V+AY
Sbjct: 836 PIQHL--NINGVLRGYEIRYWRQHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAY 893
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+AG GP S R T + P +PP V K ++ + V V W +V E ++GYKV
Sbjct: 894 NSAGTGPASPRTTVITKKPPPNRPPGNVSWK-VDGSWVTVRWDHVKSMDNESAVLGYKV 951
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P + E P VAP G+ G N + +TW P +
Sbjct: 679 WMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTP--MA 736
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + K+ P T V + ++R L + V++ AYN G
Sbjct: 737 REYQNGDSFGYILAFRKQGIPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKG 796
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGP S+ + + + P P ++ + + V+W + + GY++R W
Sbjct: 797 EGPFSQIAVVHSAEEEPTVSPRRINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWR- 855
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ A D + G A + L P YH+ VLA+++ G G S
Sbjct: 856 QHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAYNSAGTGPAS 902
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
YA G + C P PK W+K I+ + +G +LI P ++ DD G+Y
Sbjct: 249 YALSGQTAQLECFAYGNPIPKIRWRKVDGILPPKVGASV--DGPILIIPELNFDDEGMYE 306
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C N G + +GR+ V P + Q+ + LQ C+A + + W
Sbjct: 307 CEVYNSEGRETHQGRVSVQAQPDWL-QVMSDSEVEISSELQWSCAAAGKPRPTIR--WLR 363
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
NG + D + ++ G L+I N + D+G Y+CV ++ I + + V+
Sbjct: 364 NGHALITQD-------RVEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQ 414
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P W ++G+ + + R ++ NG L I+ ++ +DSG+Y C A N H S
Sbjct: 349 CAAAGKPRPTIRWLRNGHALITQDRVEV-NNGRLKIANLALEDSGMYQCVAENKHSTIYS 407
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V + P + + A R Q++ W+ G +
Sbjct: 408 NAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSR-GTELLTNSTRI 466
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
TP+ G+L I N S AD G+Y C ++ +GK ++
Sbjct: 467 TVTPD-----GILWIYNISRADEGKYTCFAENYLGKANS 500
>gi|344276490|ref|XP_003410041.1| PREDICTED: contactin-3 [Loxodonta africana]
Length = 1042
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 275/583 (47%), Gaps = 23/583 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P WKK I+ R ++ L I+ V++ D G Y+C A N
Sbjct: 437 GSLVILECKPRASPSAFSFWKKGDRIVQKSERISFLKDSGLKITNVTKADVGSYTCIAEN 496
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 497 QFGKANGTTRLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIMFTWYFNGAL- 554
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + + + G G L I N +G+Y C+V++ V ++S+ +IV G PG
Sbjct: 555 --TDFKKEGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDRVSSAADLIVRGSPG 612
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+VVE+ T+A + W +G N P+ Y + ART ++ W V+ + + +D
Sbjct: 613 PPANVKVVEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTVT--TVPEVID--- 667
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+A N++G GEPS PS + T P PS + GGGG
Sbjct: 668 GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSR 727
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+W+P+P E QN Y + +R T + +T+ + V R S ++
Sbjct: 728 SELVITWDPVPEELQNGEGFGYVVAFRPYGVTNW-IQTVVTSPDTSRYVFRNESIVPFSR 786
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
YEVKV N+ G GP S V +F D P VAP V + +S+ I V+WN I N
Sbjct: 787 YEVKVGVYNNKGEGPFSPVTAVFFCRDEPAVAPSQVSADSLSSSEIEVSWNAIPWKLSN- 845
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRT-TRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L+G+ +++W EE + + + A + L+ + YY+ V AYN+AG GP
Sbjct: 846 -GHLLGYEVRFWNNSGGEEESSSKVKVSGNETSARLRDLKSNLAYYMAVRAYNSAGTGPF 904
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S T + P +PP V + V + W V E + GYKV Q
Sbjct: 905 SATVNATTKKTPPSQPPGNV-VWNATDNKVLLNWERVKAMENESEVTGYKVFYRTSSQHN 963
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ T N A+++ L + Y + V A ++GGDG S
Sbjct: 964 VQVLST-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 1000
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 352 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 410
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + A + L C A+ + G RI +
Sbjct: 411 SAELKVVASAPDFSRNPMKKLVQVQAGSLVILECKPRAS---PSAFSFWKKGDRI----V 463
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E + D G L+ITN + AD G Y C+ ++ GK + T ++V P
Sbjct: 464 QKSERISFLKDSG-LKITNVTKADVGSYTCIAENQFGKANGTTRLVVTEP 512
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++DSG Y C
Sbjct: 252 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-NGILEIPNFQQEDSGSYEC 310
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ Q I IA NL C A + +Y W N
Sbjct: 311 IAENSRGKNVARGRLTYYAKP-HWVQTIKDIEIAVEDNLYWECRASGKP--KPSYRWLKN 367
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 368 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVVASA 420
Query: 179 P 179
P
Sbjct: 421 P 421
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T C P P + W+ +G+ I S R GNL++ +R+ D G Y C
Sbjct: 55 EDKKITFNCEARGNPSPHYRWQLNGSDIDLSLEYRYKLIGGNLVVINPNRNWDIGSYQCF 114
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 115 ATNSLGTVVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 171
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV S V
Sbjct: 172 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSMV 215
>gi|149716431|ref|XP_001499480.1| PREDICTED: contactin-5 isoform 3 [Equus caballus]
Length = 1026
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/582 (31%), Positives = 272/582 (46%), Gaps = 19/582 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G VT+ C P+ +PKP WKK + R I +G L I S+ D G Y C
Sbjct: 421 KGQEVTMECKPQGSPKPTISWKKGDKAVRENKRIAILPDGTLRILNASKSDEGKYICQGE 480
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E L V P+ E P + + ++ L C A + LDV + WT G
Sbjct: 481 NVFGSAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQP 539
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ L I N AG Y C V++T +S + ++V GPPG
Sbjct: 540 IDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 599
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V + E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 600 PGIVIIEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITG 654
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 655 DMESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRH 714
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 715 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 773
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++
Sbjct: 774 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL- 829
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + Y K+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 830 GRPQGFEVGYRKDMEQEDAAETVKTRGNESSVILTGLEGNTLYHFTVRAYNGAGYGPPSS 889
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + PS + + + + + W V P E ++GYKV + S+
Sbjct: 890 EVSATTKKSPPSQAPSNLRWEQ-QGSELSLGWEPVRPLANESEVLGYKVFYRQEGHSNSQ 948
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T P +V L Y + V A+S GGDG SS
Sbjct: 949 VIETQKPQA------VVPLPDAGVYIIEVRAYSEGGDGTASS 984
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K + S R + + L I V DD+GIY C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYVPSKARLRKSQ-AVLEIPNVQLDDAGIYECR 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 297 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 354 VPL-------LPQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 406
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C A N
Sbjct: 45 VALNCEVRGNPAPNYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLAVNT 104
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 105 FGSILSREAILQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 162 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 201
>gi|161611605|gb|AAI55825.1| Zgc:55318 protein [Danio rerio]
Length = 804
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 280/593 (47%), Gaps = 43/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P A+PKP+ W+K+ + R + N L I SR D G Y C A N
Sbjct: 200 GKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAEN 259
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L+V P E P ++ + ++ L C + LDV+++W N
Sbjct: 260 QFGSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN---- 314
Query: 125 GNMDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKT 172
N LN + DGG E T +S AD AG+Y C +++ + +
Sbjct: 315 -NQPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSADSVLAEA 367
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
++V GPPG PG V V E+ ++AT+ W+ G N PIT Y + AR+ + W
Sbjct: 368 ELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QT 422
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + D TG E+++ L PW YEF+V+A N +G G+PS PS T P AP+
Sbjct: 423 VKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPA 482
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ GG G+ +L ISWEP+ E QN Y + +R N T E + + R
Sbjct: 483 NVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYR 541
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ T +EV+V N+ G GP SEVVT+FSAE P+ P V + +S+ I V W
Sbjct: 542 DETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWK 601
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P GR G+ + +WK+ EE + L+ GL +T+Y V V +
Sbjct: 602 P----PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGF 657
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+AG+GP S T + AP PP + I+ N V ++W V E +IGYKV
Sbjct: 658 NSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGN--NVSLSWDPVKARDNESEVIGYKV 715
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ + R + ++ N+ A ++ L G Y + V A S GG+G S+
Sbjct: 716 LL----RQEGRGHSQVMRTPNS--AVVLTLPEGGTYIIEVRAVSEGGEGAASA 762
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + + R ++ NG L I + + DSG+Y C A N +G S
Sbjct: 117 CRATGKPRPTYRWLRNGEPLSTQSRVEMV-NGELTIHRLQQADSGMYQCIAENKYGAIYS 175
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ +++ L C ++ W N R+
Sbjct: 176 SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIM 233
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L + L I N+S +D G Y C ++ G T ++V+ P
Sbjct: 234 L------LRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEP 275
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 69/181 (38%), Gaps = 15/181 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P W+K GNI RK L I + +DSG Y C
Sbjct: 18 AAKGVTVRLECFALGNPVPTITWRKMSGNIPKKARLRK--SQAVLEIPNIQLEDSGSYEC 75
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G +G L V P + + + + L+ C A + Y W N
Sbjct: 76 KAENTRGGTAFRGHLQVYTLPQWISMI-NDTQLDSGEQLRWECRATGKP--RPTYRWLRN 132
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + + + G L I AD+G Y+C+ ++ G I S + ++
Sbjct: 133 GEPLSTQS-------RVEMVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILASA 185
Query: 179 P 179
P
Sbjct: 186 P 186
>gi|27805871|ref|NP_776705.1| contactin-1 precursor [Bos taurus]
gi|55976304|sp|Q28106.1|CNTN1_BOVIN RecName: Full=Contactin-1; AltName: Full=Neural cell surface
protein F3; Flags: Precursor
gi|1060861|dbj|BAA06861.1| F3/F11/Contactin [Bos taurus]
Length = 1018
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 290/592 (48%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKP F+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMTETFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 400
>gi|18858449|ref|NP_571521.1| contactin-2 precursor [Danio rerio]
gi|4867989|gb|AAD31083.1|AF064799_1 transiently expressed axonal glycoprotein [Danio rerio]
Length = 1040
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 272/539 (50%), Gaps = 27/539 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V + C P AAPKP W + ++ + R + +G L I +SR D G Y+C
Sbjct: 431 AARGGQVKMECKPRAAPKPTLFWSRGTELLTNSTRITVTPDGILWIYNISRADEGKYTCF 490
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N L+C A + +D+ + W+ NG
Sbjct: 491 AENYLGKANSTGHLSVRDA-TKITLAPSNADINQGENATLQCHASHDPTMDLTFTWSLNG 549
Query: 122 VRIGNMDLNELETPNIN---IDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
V + +LE PN + ++G G L I N + AG Y C ++ V +
Sbjct: 550 VPL------DLEEPNGHYRRMEGKETIGDLVIVNGQLSHAGTYTCTAQTVVDSAMASAKL 603
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
+V GPPG PGG+ V V+ TS ++W+ G N PI Y I+ R++ W +
Sbjct: 604 VVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPIGKYVILGRSSQTHDWKRMRTDPAN 663
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E G E++ L PW YEF+VIA N LG GEPS PSP+ T P APS +
Sbjct: 664 IE-----GNAESARVIDLRPWMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGL 718
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--VVR 352
GGGGG +L I+W P+ RE QN + Y + +RK+ + T+ + NV + V
Sbjct: 719 GGGGGNRNELIITWTPMAREYQNGDSFGYILAFRKQG---IPTWTVVKVPNVESSRYVYS 775
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
S Y +EV+++A N G GP S++ + SAE+ P V+P+ + + + I V+W
Sbjct: 776 NDSLTAYCPFEVRIKAYNKKGEGPFSQIAVVHSAEEEPTVSPRWINATALTAFEIQVSWE 835
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
PI+ + NI G L G+ I+YW++ E A + N A + GL+P+T Y++ V+AY
Sbjct: 836 PIQHL--NINGVLRGYEIRYWRQHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAY 893
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+AG GP S R T + P +PP V K ++ + V V W +V E ++GYKV
Sbjct: 894 NSAGTGPASPRTTVITKKPPPNRPPGNVSWK-VDGSWVTVRWDHVKSMDNESAVLGYKV 951
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P + E P VAP G+ G N + +TW P +
Sbjct: 679 WMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTP--MA 736
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + K+ P T V + ++R L + V++ AYN G
Sbjct: 737 REYQNGDSFGYILAFRKQGIPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKG 796
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGP S+ + + + P P ++ + + V+W + + GY++R W
Sbjct: 797 EGPFSQIAVVHSAEEEPTVSPRWINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWR- 855
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ A D + G A + L P YH+ VLA+++ G G S
Sbjct: 856 QHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAYNSAGTGPAS 902
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P W ++G+ + + R ++ NG L I+ ++ +DSG+Y C A N H S
Sbjct: 349 CAAAGKPRPTIRWLRNGHALITQDRVEV-NNGRLKIANLALEDSGMYQCVAENKHSTIYS 407
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V + P + + A R Q++ W+ G +
Sbjct: 408 NAELRVQVQAPDFRLNPVRKLVPAARGGQVKMECKPRAAPKPTLFWSR-GTELLTNSTRI 466
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
TP+ G+L I N S AD G+Y C ++ +GK ++
Sbjct: 467 TVTPD-----GILWIYNISRADEGKYTCFAENYLGKANS 500
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
YA G + C P PK W+K I+ + +G +LI P ++ DD G+Y
Sbjct: 249 YALSGQTAQLECFAYRNPIPKIRWRKVDGILPPKVGTSV--DGPILIIPELNFDDEGMYE 306
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C N G + +GR+ V P + Q+ + LQ C+A + + W
Sbjct: 307 CEVYNSEGRETHQGRVSVQAQPDWL-QVMSDSEVEISSELQWSCAAAGKPRPTIR--WLR 363
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
NG + D + ++ G L+I N + D+G Y+CV ++ I + + V+
Sbjct: 364 NGHALITQD-------RVEVNNGRLKIANLALEDSGMYQCVAENKHSTIYSNAELRVQ 414
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 36/227 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVW--KKDGNIIG-SGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + C P A P + W + N I GR + + GNL ++ +D+G Y
Sbjct: 144 EGMGTFLACQPPAHYPALSYRWFINEFPNFIQPEAGRWFVSQVTGNLYLANARANDTGNY 203
Query: 59 SCTATNVHGMDES------KGRLIVLH--------GPSYYEQLPPKITIAAHRNLQLRCS 104
C T MD S K + +H P+ + P + + + QL C
Sbjct: 204 FCFTT--INMDVSTKSIFSKAVQLTVHPDASPRKTAPNIRVRFPAETYALSGQTAQLECF 261
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNI--NIDGGLLEITNASFADAGEYECVVK 162
A+ + + + ++ + P + ++DG +L I +F D G YEC V
Sbjct: 262 AYRNPIPKIRW-----------RKVDGILPPKVGTSVDGPILIIPELNFDDEGMYECEVY 310
Query: 163 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
++ G+ + + V V+ P + EV + S+ +QW+ A G+P
Sbjct: 311 NSEGRETHQGRVSVQAQPDWLQVMSDSEV-EISSELQWSCAAA-GKP 355
>gi|41054217|ref|NP_956098.1| contactin-5 [Danio rerio]
gi|55976499|sp|Q7ZW34.1|CNTN5_DANRE RecName: Full=Contactin-5; Flags: Precursor
gi|28279510|gb|AAH45307.1| Zgc:55318 [Danio rerio]
Length = 1056
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 280/593 (47%), Gaps = 43/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P A+PKP+ W+K+ + R + N L I SR D G Y C A N
Sbjct: 452 GKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAEN 511
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L+V P E P ++ + ++ L C + LDV+++W N
Sbjct: 512 QFGSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN---- 566
Query: 125 GNMDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKT 172
N LN + DGG E T +S AD AG+Y C +++ + +
Sbjct: 567 -NQPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
++V GPPG PG V V E+ ++AT+ W+ G N PIT Y + AR+ + W
Sbjct: 620 ELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QT 674
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + D TG E+++ L PW YEF+V+A N +G G+PS PS T P AP+
Sbjct: 675 VKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPA 734
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ GG G+ +L ISWEP+ E QN Y + +R N T E + + R
Sbjct: 735 NVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYR 793
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ T +EV+V N+ G GP SEVVT+FSAE P+ P V + +S+ I V W
Sbjct: 794 DETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWK 853
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P GR G+ + +WK+ EE + L+ GL +T+Y V V +
Sbjct: 854 P----PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGF 909
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+AG+GP S T + AP PP + I+ N V ++W V E +IGYKV
Sbjct: 910 NSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGN--NVSLSWDPVKARDNESEVIGYKV 967
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ + R + ++ N+ A ++ L G Y + V A S GG+G S+
Sbjct: 968 LL----RQEGRGHSQVMRTPNS--AVVLTLPEGGTYIIEVRAVSEGGEGAASA 1014
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + + R ++ NG L I + + DSG+Y C A N +G S
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMV-NGELTIHRLQQADSGMYQCIAENKYGAIYS 427
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ +++ L C ++ W N R+
Sbjct: 428 SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIM 485
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L + L I N+S +D G Y C ++ G T ++V+ P
Sbjct: 486 L------LRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEP 527
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 127/352 (36%), Gaps = 58/352 (16%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + +P+ + W + + + RR I E GNL I V D G Y
Sbjct: 167 EGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYV 226
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P + A ++L C A
Sbjct: 227 CQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNP 286
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + M N + + +LEI N D+G YEC ++T G +
Sbjct: 287 VPTITW---------RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTA 337
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + V P + ++ + ++W AT G+P Y+ + ST V
Sbjct: 338 FRGHLQVYTLPQWISMINDTQLD-SGEQLRWECRAT-GKPRPTYRWLRNGEPLSTQSRVE 395
Query: 230 ----EHVIGKEVDRYTGRKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
E I + +G + EN +S+ E K++A +P +N
Sbjct: 396 MVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILAS-----------APMFN--- 441
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
P R+ GK D+S+ P K +I WR KND Q
Sbjct: 442 ----NNPVRLIATVGK--DVSLECRPRASPKP-------RISWR-KNDRRLQ 479
>gi|348525482|ref|XP_003450251.1| PREDICTED: contactin-5-like [Oreochromis niloticus]
Length = 1100
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 282/587 (48%), Gaps = 31/587 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P+A+PKP+ WK+ I R + N L I SR D G Y C A N
Sbjct: 496 GKDVSLDCKPKASPKPRITWKRGDRRIIPNKRIMLLRNNTLKIVNSSRADEGNYVCRAEN 555
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L V P ++ + ++ L C A + LDVA+ W N I
Sbjct: 556 QLGSAEMTAILWVKEAMRVVLS-PSRVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPI 614
Query: 125 GNM----DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++T + +D L I N AG+Y C +++ + + ++V GPP
Sbjct: 615 NFQYDGGHFEYIQTQSSTVD---LMIRNILLKHAGKYGCRAQTSADTVFAEAELLVRGPP 671
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PG V V E+ T+AT+ WT G N PI+ Y I AR+ ++ W + + +
Sbjct: 672 GPPGVVIVEEITDTTATLSWTRGVDNHSPISTYNIQARSPFSLGW-----QTVKTDPEPV 726
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
TG E+++ L PW YEF+V+A N +G G+PS+PS T P APS + GG G+
Sbjct: 727 TGDMESAMAVELNPWVEYEFRVVATNAIGTGDPSAPSRGVRTKEAVPSVAPSNVSGGNGR 786
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L ISWEP+ E QN Y + +R N T E + + + R + T
Sbjct: 787 RHELVISWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLT 845
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRE 419
+EVKV N+ G GP S+VV I SAE P+ AP V + G +S+ I VTW +P
Sbjct: 846 PFEVKVGVYNNKGDGPFSKVVIIHSAEGEPREAPSDVKAYGISSSEIRVTWKSPTPG--- 902
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+ G+ + YWK+ EE+ + ++ GL+ ++ Y + V +N+ G+GP
Sbjct: 903 --PGKPRGYEVSYWKDMELEESGKKQQTVKNETSMVLTGLEGNSVYAITVKGFNSIGQGP 960
Query: 480 ESERYLERTYRKAPQKPPSAVH--IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
S +T + P +PP+ +H +G N V ++W V E +IGY V + +
Sbjct: 961 ASTAVTAKTRKPPPAQPPANLHWLQEGNN---VSLSWDPVKAKDNESDVIGYMVLLKQEG 1017
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ ++ TI P + ++ L G Y + V A S GG+G +SS
Sbjct: 1018 RGHNQVTRTINP------STMLSLPEGGTYVIEVRALSEGGEGAVSS 1058
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + S GR +I NG L I V + DSG+Y C A N + S
Sbjct: 413 CKAIGRPRPTYRWLRNGLPLTSQGRLEIV-NGELTIHKVQQADSGMYQCVAENKYAAIYS 471
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ +++ L C + W RI
Sbjct: 472 NAELQILASAPVFVPNPIRVIATLGKDVSLDCKPKASPKPRIT--WKRGDRRI------- 522
Query: 132 LETPNINI---DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
PN I L+I N+S AD G Y C ++ +G S + T I+
Sbjct: 523 --IPNKRIMLLRNNTLKIVNSSRADEGNYVCRAENQLG--SAEMTAIL 566
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 15/190 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P W+K +GNI RK L I + +DSG Y C
Sbjct: 315 AKGVTVRLECFALGNPVPTITWRKINGNIPKKARLRK--SQAVLEIPNIQLEDSGTYECK 372
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G KG L V P + + + + LQ C A Y W NG
Sbjct: 373 AENPRGSTAFKGHLQVYTLPQWVRMI-NDTQMDSGEKLQWECKAIGRP--RPTYRWLRNG 429
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + + + I G L I AD+G Y+CV ++ I + + ++ P
Sbjct: 430 LPLTSQG-------RLEIVNGELTIHKVQQADSGMYQCVAENKYAAIYSNAELQILASAP 482
Query: 180 PGLPGGVQVV 189
+P ++V+
Sbjct: 483 VFVPNPIRVI 492
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENGNLLISPVSR-DDSGIYSCTATNV 65
V + C P P + W +G + S R F +GNL+IS S D G Y C A N
Sbjct: 121 VVMHCEARGNPPPTYSWYINGTQVDSEADYRYTFIDGNLIISNASEITDYGKYQCKAENS 180
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G+ S+ L+ + ++ + +++ + + L C+ H+ E++ Y W N
Sbjct: 181 IGIVLSRDALLQFAYLGAFSTKARGGVSVREGQGVVLMCTPPPHSPEII---YSWVFNEF 237
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ D G L I+ +D G Y C+VK+TV
Sbjct: 238 ---PSFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNTV 277
>gi|326911406|ref|XP_003202050.1| PREDICTED: contactin-1-like [Meleagris gallopavo]
Length = 1010
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 293/590 (49%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R +I+++G+L I V++ D G Y+C
Sbjct: 417 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCF 476
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 477 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 535
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 536 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 595
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 596 GPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDI 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PS + T P APS +GGGGG
Sbjct: 651 EGNMESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGS 710
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ +G V + S T
Sbjct: 711 NRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPST 769
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N+ G GP S I+SA+D P P V + +S+ I+V+W+ +
Sbjct: 770 QYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHV------ 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y++ V A+N+AG GP
Sbjct: 824 TEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHIDVSAFNSAGYGPP 883
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S R ++ RKAP Q+P ++ + + +TW +V E + GYKV Q
Sbjct: 884 S-RTVDIITRKAPPSQRPRIISSVR--SGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQ 940
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T +T++ V + Y + V A S GGDG ++ I+
Sbjct: 941 HEGKLFST---GKHTIE---VPVPSDGEYVVEVRAHSEGGDGEVAQIKIS 984
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 74/188 (39%), Gaps = 34/188 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 243 YALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFN--------IQYE 294
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N G D+ + R+ V P + E + +L C A + + +
Sbjct: 295 DEGLYECEAENYKGKDKHQARVYVQASPEWVEHI-NDTEKDIGSDLYWPCVATGKPIPTI 353
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NGV + G L I + +F DAG Y+C+ ++T G I
Sbjct: 354 R--WLKNGV---------------SFRKGELRIQSLTFEDAGMYQCIAENTHGIIYANAE 396
Query: 174 V-IVEGPP 180
+ IV PP
Sbjct: 397 LKIVASPP 404
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L I ++ +D+G+Y C A N HG+ +
Sbjct: 343 CVATGKPIPTIRWLKNG---------VSFRKGELRIQSLTFEDAGMYQCIAENTHGIIYA 393
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L ++ P +E P K I A + ++ + + W+ + N
Sbjct: 394 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS--- 450
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIST 170
I I D G LEI N + D G Y C ++ GK ++
Sbjct: 451 ----RIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANS 486
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+IS P D+G Y C +N
Sbjct: 51 GQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLIISNPEKSRDAGKYVCIVSN 110
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 111 IFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 167
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 168 EFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 207
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A ++ L P +Y +++A N G G P RT P PS V G + + +
Sbjct: 657 ARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTI 716
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
TW +S + GY V +++ R T +G + D + P +Y ++V
Sbjct: 717 TWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKD-ESMPPSTQYQVKV 775
Query: 572 LAFSNGGDGRMSSPAITF 589
AF+N GDG S A+ +
Sbjct: 776 KAFNNKGDGPFSLTAVIY 793
>gi|395531178|ref|XP_003767659.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Sarcophilus harrisii]
Length = 1059
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 292/583 (50%), Gaps = 22/583 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P +APK +W K I+ + R I +G L++ +SR D G Y+C
Sbjct: 448 AARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKYTCF 507
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + W +G
Sbjct: 508 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGENLTLQCHASHDPTMDLTFTWALDG 566
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V S T++V GPP
Sbjct: 567 FPIDFDKSGGHYRRASLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVRGPP 626
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + AR+ + W V + E
Sbjct: 627 GPPGGVVVRDISNTTVQLTWSRGFDNHSPIAKYTLQARSLPDGKWKQVRTNPANIE---- 682
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 683 -GNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKESAPTVAPSGLSGGGGA 741
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L I+W P+ RE QN Y + +R++ +++Q + + V R S YT
Sbjct: 742 PGELIINWTPMLREYQNGEGFGYLLSFRRQGSSDWQKAKVSHADALHF-VYRNESVRPYT 800
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK++ N G GPES T++SAE+ P+VAP V ++G S+ ++V W P+ +++
Sbjct: 801 PFEVKIRGYNRQGEGPESLTTTVYSAEEEPRVAPAKVKAKGTLSSEMDVMWEPVH--QDD 858
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK+ + E A + A + GLQP+TKY+V V AYN AG GP
Sbjct: 859 MNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTSARVTGLQPNTKYHVTVRAYNRAGTGPA 918
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S T + P++PP + ++ +++++ W V P E + GYK+ +
Sbjct: 919 SPSTNATTMKPPPRRPPGNISWT-LSSSSLNIKWDPVIPQRNESAVTGYKM--------L 969
Query: 541 SRANDTIIPVGNTLDADIVDLS-PGKRYH--MRVLAFSNGGDG 580
R + P+ + + + +++S P H +++ A GGDG
Sbjct: 970 YRNDLHSAPILHLANKNWIEISVPEDSSHALVQIRATGPGGDG 1012
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P ++
Sbjct: 696 WMDYEFRVVASNILGTGEPSGPSSKIRTKESAPTVAPSGLSGGGGAPGELIINWTP--ML 753
Query: 418 RENIRGRLIGHRIKYWKEDNPE--------ETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + + A++++ R ++P T + VK+
Sbjct: 754 REYQNGEGFGYLLSFRRQGSSDWQKAKVSHADALHFVYRNE-------SVRPYTPFEVKI 806
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YN GEGPES + + P+ P+ V KG + + V W V ++GY
Sbjct: 807 RGYNRQGEGPESLTTTVYSAEEEPRVAPAKVKAKGTLSSEMDVMWEPVHQDDMNGVLLGY 866
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++R W+ D D A D + G A + L P +YH+ V A++ G G S
Sbjct: 867 EIRYWK-DGDKEAAADRVRTAGLDTSARVTGLQPNTKYHVTVRAYNRAGTGPAS 919
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + S + L I V+ +D G Y C
Sbjct: 268 YALVGQQVTLECFAFGNPVPRIKWRK---LDDSLPPQWATAEPTLQIPSVNFEDEGTYEC 324
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +KGR+IV P + + + NL+ C+A + + W N
Sbjct: 325 EAENTKGRDTAKGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTIR--WLRN 381
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + I GG L+ + D+G Y+CV ++ G I + V+
Sbjct: 382 GDPLSSQN-------RVEISGGDLKFSKLVLEDSGMYQCVAENKHGTIYASAELAVQA 432
>gi|358415965|ref|XP_003583257.1| PREDICTED: contactin-2-like [Bos taurus]
Length = 783
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 265/528 (50%), Gaps = 13/528 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 198 GSDLHWACAAAGKPRPAVRWLRNGEPLTSQARVEVLA-GDLRFSKLSLEDSGMYQCVAEN 256
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P I NL L+C A + +D+ ++WT + I
Sbjct: 257 KHGTIYASAELAV-QDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPI 315
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ + ++ G L I NA G+Y C ++ V S + TV+V GPPG P
Sbjct: 316 DFDKPGGHYQRASVKETVGDLTILNAQLRHGGKYTCTAQTVVDSASKEATVLVRGPPGAP 375
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
GGV V ++ TS + W+ G N PI Y + ART + W V + E G
Sbjct: 376 GGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPTNIE-----GN 430
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG G+
Sbjct: 431 AETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGE 490
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L+++W P+ RE Q+ Y + +R++ T +Q+ + + V S YT +E
Sbjct: 491 LTVTWTPMSREYQHGGGFGYLVSFRRQGGTSWQTARVPG-ADAQYFVYSNDSIRPYTPFE 549
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VK+++ N G GPES V ++SAE+ P+VAP V+++ +S+ +NV+W P++ +++ G
Sbjct: 550 VKIRSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQ---QDMNG 606
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ I+YWK A + AL+ GL TKY+V V AYN AG GP S
Sbjct: 607 ILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPASPS 666
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
T + P++PP + + +++ + W V P E + GYK+
Sbjct: 667 ANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLGNESAVTGYKM 713
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + VTW P+
Sbjct: 442 WMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGELTVTWTPMS-- 499
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ P A Y++ ++P T + VK+
Sbjct: 500 REYQHGGGFGYLVSFRRQGGTSWQTARVPGADAQYFVYSND-------SIRPYTPFEVKI 552
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES + + + P+ P V K ++ + ++V+W V ++GY
Sbjct: 553 RSYNRRGDGPESLVAVVYSAEEEPRVAPPKVWAKAVSSSEMNVSWEPVQQDMNGI-LLGY 611
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ + A + + G A + L +YH+ V A++ G G S A
Sbjct: 612 EIRYWKAGA-KAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPASPSANAT 670
Query: 590 QM 591
M
Sbjct: 671 TM 672
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 13/177 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I V +D G Y C
Sbjct: 107 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVGFEDEGTYEC 163
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + +L C+A + A W N
Sbjct: 164 EAENTKGRDTVQGRIIVQAQPEWLRVISDREADIGS-DLHWACAAAGKP--RPAVRWLRN 220
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
G + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 221 GEPLTSQ-------ARVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQ 270
>gi|410910446|ref|XP_003968701.1| PREDICTED: contactin-5-like [Takifugu rubripes]
Length = 1055
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 278/587 (47%), Gaps = 32/587 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P A+PKP+ +WK+ I R + N L I SR D G Y C A N
Sbjct: 453 GKDVSLDCKPRASPKPRILWKRGDRRIQPNKRIMLLRNNTLRIVNSSRTDEGSYVCRADN 512
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L V E P ++ + ++ L C A + LDV + W N I
Sbjct: 513 QFGSAEMTAVLWVKDA-MRVELSPHRVEVTVGESVVLSCKATHDTSLDVTFQWFFNQRPI 571
Query: 125 GNMD----LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++T + +D L I N AG Y C +++ ++ + ++V GPP
Sbjct: 572 TFQQDGGHFEYIQTQSSTVD---LMIRNILLRHAGRYGCRAQTSADTVTAEAELLVRGPP 628
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PG V V E+ +AT+ WT G N PI+ Y + AR+ ++ W + + D
Sbjct: 629 GPPGVVIVEEITDATATLSWTRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPV 683
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
TG E+++ L PW YEF+V+A N +G G+PS PS T P AP+ + GG G+
Sbjct: 684 TGDLESAMAVQLNPWVEYEFRVVATNAIGTGDPSVPSRGVRTKEAVPSVAPANVSGGNGR 743
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I WEP+ E QN Y + +R N T E + + + R + T
Sbjct: 744 RHELVILWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTMYKYRDETFPPLT 802
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVKV N+ G GP S+VV I SAE P+ AP V + +S+ I +TW P
Sbjct: 803 PFEVKVGVYNNKGDGPFSKVVIIHSAEGEPKEAPSDVKAYSISSSEIRLTWKP-----SP 857
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV--GLQPDTKYYVKVMAYNNAGEG 478
G+ G+ + YWKE +E RT +N I+ GL+ +T+Y V +N+ G+G
Sbjct: 858 GPGKPKGYEVCYWKEMEQQEAG--KKQRTVKNETTIILTGLEGNTRYQFTVNGFNSVGQG 915
Query: 479 PESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
P S +T R P +PPS + I+ N V ++W V E +IGY V + +
Sbjct: 916 PASAAVSAKTRRSPPAQPPSNLMWIQEGN--NVSLSWEPVKAKENESDVIGYMVLLKQEG 973
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ ++ TI P + ++ L G Y + V A S GG+G +SS
Sbjct: 974 RGYNQVTRTINP------STMLCLPEGGTYIIEVRALSEGGEGALSS 1014
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 145/609 (23%), Positives = 225/609 (36%), Gaps = 95/609 (15%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + S +I NG L I V + DSG+Y C N +G S
Sbjct: 370 CKATGRPRPTYRWLRNGLPLTSQSGVEIL-NGELTIHKVQQTDSGMYQCVGENKYGAIYS 428
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P + +++ L C + +W RI
Sbjct: 429 NAELKILASAPVFVDNPVWVIATLGKDVSLDCKPRASPKPRI--LWKRGDRRI------- 479
Query: 132 LETPNINI---DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
PN I L I N+S D G Y C + G + V+ +
Sbjct: 480 --QPNKRIMLLRNNTLRIVNSSRTDEGSYVCRADNQFGSAEMTAVLWVKDAMRVELSPHR 537
Query: 189 VEV-------------HKTS--ATIQWTDGATNGRPIT------HYKIIARTNWNSTWFN 227
VEV H TS T QW N RPIT H++ I +ST
Sbjct: 538 VEVTVGESVVLSCKATHDTSLDVTFQW---FFNQRPITFQQDGGHFEYIQTQ--SSTVDL 592
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+ +++ + RY R + S + V A EL P P P ++
Sbjct: 593 MIRNILLRHAGRYGCRAQTSADT-----------VTAEAELLVRGP--PGPPGVVIVEEI 639
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSETLKEYGNV 346
A + + G IS L + +P + + W+ K D + + L+
Sbjct: 640 TDATATLSWTRGLDNHSPISTYNL---QARSP---FSLGWQTVKTDPDPVTGDLES---- 689
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+AV P + EYE +V A N +G G P + + E +P VAP V
Sbjct: 690 AMAVQLNP----WVEYEFRVVATNAIGTGDPSVPSRGVRTKEAVPSVAPANVSGGNGRRH 745
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWAL 455
+ + W P+ +N G G+ + + WKE + + T Y T
Sbjct: 746 ELVILWEPVSEEFQN--GEGFGYIVAFRANGTRGWKEKMVTSADSTMYKYRDET------ 797
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
P T + VKV YNN G+GP S+ + + P++ PS V I+ + + +TW+
Sbjct: 798 ---FPPLTPFEVKVGVYNNKGDGPFSKVVIIHSAEGEPKEAPSDVKAYSISSSEIRLTWK 854
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
PS GY+V W+ + + A V N + L RY V F+
Sbjct: 855 ---PSPGPGKPKGYEVCYWK-EMEQQEAGKKQRTVKNETTIILTGLEGNTRYQFTVNGFN 910
Query: 576 NGGDGRMSS 584
+ G G S+
Sbjct: 911 SVGQGPASA 919
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 64/168 (38%), Gaps = 13/168 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P W+K +GNI RK L I + +DSG Y C
Sbjct: 271 AARGATVRLECFALGNPVPTITWRKINGNIPKKARLRK--SQAVLEIPNIQLEDSGTYEC 328
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G KG L V P + + + + L+ C A Y W N
Sbjct: 329 KAENPRGGTAFKGHLQVYTLPQWVRMI-NDTQMDSGEKLRWECKATGRP--RPTYRWLRN 385
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G+ + + + I G L I D+G Y+CV ++ G I
Sbjct: 386 GLPLTSQS-------GVEILNGELTIHKVQQTDSGMYQCVGENKYGAI 426
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSR-DDSGIYSCTATN 64
V + C P P + W + I S R + E G+L+I+ S D G+Y C A N
Sbjct: 78 VVMHCEARGNPAPTYSWHLNQTEIDSEADFRYSVVE-GSLIINNASMASDYGMYQCKAEN 136
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
G S+ L+ +Y K +++ + + L C+ H+ E++ Y W
Sbjct: 137 SFGTILSRDALLRF---AYLNDFSRKARGDVSVREGQGVVLMCTPPPHSPEII---YSWV 190
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ G L I+ +D G Y C+VK+TV
Sbjct: 191 FNEF---PSFVAEDSRRFISQHTGNLYISKVQPSDVGSYICLVKNTV 234
>gi|301606492|ref|XP_002932857.1| PREDICTED: contactin-1-like [Xenopus (Silurana) tropicalis]
Length = 1005
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 290/597 (48%), Gaps = 49/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPK KF W K ++ + R I+++G+L I +++ D G Y+C
Sbjct: 412 AAKGGRVIIECKPKAAPKAKFSWSKGTELLINSSRVSIWDDGSLEILNITKLDEGSYTCF 471
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P + N ++C A + LD+ +IWT NG
Sbjct: 472 AENDRGKANSTGVLSVT-AATKITLAPSNADVTVGENATMQCHASHDPTLDLTFIWTLNG 530
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + E N G L I NA AG Y C ++ V S ++V GPP
Sbjct: 531 FPIEFDKEDGHYERAIRNDVGSELVIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 590
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV+V E+ TS + W+ G N +PI+ Y I A+ + W +V E
Sbjct: 591 GPPGGVRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAKNILSEDWKDVK-----TENPNI 645
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PSP+ T P AP+ +GGGGG
Sbjct: 646 EGNMEMARAIDLIPWMDYEFRVTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGS 705
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY- 359
+L+++W+PL RE Y + ++ N E++ +V P +Y
Sbjct: 706 NRELTVTWQPLSREYHYGDGFGYVVAFKLFNYREWRK-----------VIVTNPESGHYV 754
Query: 360 ---------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
T+++VKV+A N VG GP S V I+SAED+P AP + +S+ ++V
Sbjct: 755 HKDDTITPATQFQVKVKAFNKVGEGPYSSTVVIYSAEDVPIEAPTAIVYNILSSSEVSVA 814
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
W+P+ + G++++YW+ + E A + + + GL PDT Y ++V
Sbjct: 815 WHPV------YEKSIEGYQVRYWRTQDKEAAAHRVQVKASDITTRLEGLLPDTHYNLEVR 868
Query: 471 AYNNAGEGPESERYLERTYRKAP--QKP--PSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
A+N+AG+GP S R + +KAP QKP SAV + +TW +V P E +
Sbjct: 869 AFNSAGDGPPS-RVITFLTKKAPPSQKPRITSAVRYG----SQYIITWEHVVPLSNESAV 923
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
GYKV QD R ++++ + + Y + V A S GGDG ++
Sbjct: 924 NGYKVL---YRQDGQRDGKLYSTGKHSVELPVPEEG---EYVVEVRAHSEGGDGAVA 974
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 147/627 (23%), Positives = 244/627 (38%), Gaps = 115/627 (18%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C + P+P W K+G G G+L+ ++ +D+G+Y C A N
Sbjct: 331 GSDLHWACVAKGKPQPSIRWLKNGASYG---------KGDLIKRGLTLEDAGMYQCIAEN 381
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+HG+ + L +L +E P + + A + ++ + + W+ +
Sbjct: 382 MHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKGTELL 441
Query: 125 GNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGK----------ISTKTT 173
N + ++I D G LEI N + D G Y C ++ GK +TK T
Sbjct: 442 IN-------SSRVSIWDDGSLEILNITKLDEGSYTCFAENDRGKANSTGVLSVTAATKIT 494
Query: 174 VIVEGPPGLPGGVQVVEVHKT-----SATIQWTDGATNGRPIT------HYKIIARTNWN 222
+ G ++ H + T WT NG PI HY+ R +
Sbjct: 495 LAPSNADVTVGENATMQCHASHDPTLDLTFIWT---LNGFPIEFDKEDGHYERAIRNDVG 551
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
SE VI ++ GR + + ++ + SS S
Sbjct: 552 ------SELVIKNAQLKHAGRYTCTAQTIV-------------------DNSSASADLVV 586
Query: 283 PADKPYQAPSRIGGGGGKIGDLSI--SW-------EPLPREKQNAPNIYYKIFWRKKNDT 333
G +I D S+ +W +P+ + A NI + W+ D
Sbjct: 587 RG----PPGPPGGVRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAKNILSED-WK---DV 638
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQV 392
+ ++ ++ + A+ IP + +YE +V A N +G G P I + P V
Sbjct: 639 KTENPNIEGNMEMARAIDLIP----WMDYEFRVTATNTLGVGEPSLPSPKIRTEGAAPIV 694
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-------WKE---DNPEETA 442
AP V G ++ + VTW P L RE G G+ + + W++ NPE
Sbjct: 695 APAEVGGGGGSNRELTVTWQP--LSREYHYGDGFGYVVAFKLFNYREWRKVIVTNPESGH 752
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ T + P T++ VKV A+N GEGP S + + P + P+A+
Sbjct: 753 YVHKDDT---------ITPATQFQVKVKAFNKVGEGPYSSTVVIYSAEDVPIEAPTAIVY 803
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562
++ + V V W V E+ I GY+VR W QD A + + + + L
Sbjct: 804 NILSSSEVSVAWHPVY----EKSIEGYQVRYWRT-QDKEAAAHRVQVKASDITTRLEGLL 858
Query: 563 PGKRYHMRVLAFSNGGDGRMSSPAITF 589
P Y++ V AF++ GDG S ITF
Sbjct: 859 PDTHYNLEVRAFNSAGDGPPSR-VITF 884
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 62/169 (36%), Gaps = 33/169 (19%)
Query: 7 NVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
NVT+ C P P W+K I SG KIF + +D G Y
Sbjct: 244 NVTLECFALGNPIPVITWRKTNEAMPASAEISMSGAVLKIFN--------IQPEDEGTYE 295
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ GMD K + V P + E + +L C A + + W
Sbjct: 296 CEAKNIKGMDTHKAYVYVEGVPEWVEHI-NDTERDIGSDLHWACVAKGKPQPSIR--WLK 352
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG G DL I GL + DAG Y+C+ ++ G I
Sbjct: 353 NGASYGKGDL---------IKRGL------TLEDAGMYQCIAENMHGII 386
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 21/163 (12%)
Query: 30 IIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP 88
I RR + + NGNL I+ V + D G YSC ++ + I L + + P
Sbjct: 164 FISPDNRRFVTQANGNLYIAKVEQSDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKP 223
Query: 89 PKIT-----------IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 137
+ T +N+ L C A + + + T+ + + I
Sbjct: 224 KRYTPVINVKFKDTRALKDQNVTLECFALGNPIPVITWRKTNEAMP---------ASAEI 274
Query: 138 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ G +L+I N D G YEC K+ G + K V VEG P
Sbjct: 275 SMSGAVLKIFNIQPEDEGTYECEAKNIKGMDTHKAYVYVEGVP 317
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 60/163 (36%), Gaps = 11/163 (6%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A P P + W+++ I GNL+I +P DSG Y C +N
Sbjct: 43 GKVSVNCRARANPPPVYKWRRNNWEIDLLNEHYSLVGGNLVINNPDKYKDSGKYVCIVSN 102
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
++G S+ + Y + P ++ + L C D+ Y W N
Sbjct: 103 MYGKVWSREANLNF---GYLDPFPTEERYEVKVKEGTGAVLICDPPPHFPDDLNYRWLLN 159
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ N N G L I +D G Y C V S
Sbjct: 160 EFPVFISPDNRRFVTQAN---GNLYIAKVEQSDRGNYSCFVSS 199
>gi|292494926|ref|NP_001004381.3| contactin-1 preproprotein [Gallus gallus]
gi|116917|sp|P14781.1|CNTN1_CHICK RecName: Full=Contactin-1; AltName: Full=Neural cell recognition
molecule F11; Flags: Precursor
gi|63385|emb|CAA33018.1| neural cell recognition protein [Gallus gallus]
Length = 1010
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 291/590 (49%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R I+++G+L I V++ D G Y+C
Sbjct: 417 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCF 476
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 477 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 535
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 536 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 595
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 596 GPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDI 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PS + T P APS +GGGGG
Sbjct: 651 EGNMESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGS 710
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ +G V + S T
Sbjct: 711 NRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPST 769
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N G GP S I+SA+D P P V + +S+ I+V+W+ +
Sbjct: 770 QYQVKVKAFNSKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHV------ 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y++ V A+N+AG GP
Sbjct: 824 TEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHIDVSAFNSAGYGPP 883
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S R ++ RKAP Q+P ++ + + +TW +V E + GYKV Q
Sbjct: 884 S-RTIDIITRKAPPSQRPRIISSVR--SGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQ 940
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T +T++ V + Y + V A S GGDG ++ I+
Sbjct: 941 HEGKLFST---GKHTIE---VPVPSDGEYVVEVRAHSEGGDGEVAQIKIS 984
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 36/189 (19%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 243 YALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFN--------IQYE 294
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLD 112
D G+Y C A N G D+ + R+ V P + E + + I + +L C A + +
Sbjct: 295 DEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGS--DLYWPCVATGKPIPT 352
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W NGV + G L I +F DAG Y+C+ ++ G I
Sbjct: 353 IR--WLKNGV---------------SFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANA 395
Query: 173 TV-IVEGPP 180
+ IV PP
Sbjct: 396 ELKIVASPP 404
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L I ++ +D+G+Y C A N HG+ +
Sbjct: 343 CVATGKPIPTIRWLKNG---------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYA 393
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L ++ P +E P K I A + ++ + + W+ + N
Sbjct: 394 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS--- 450
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIST 170
I+I D G LEI N + D G Y C ++ GK ++
Sbjct: 451 ----RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANS 486
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+IS P D+G Y C +N
Sbjct: 51 GQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLVISNPEKSRDAGKYVCVVSN 110
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 111 IFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 167
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 168 EFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 207
>gi|326933669|ref|XP_003212923.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Meleagris
gallopavo]
Length = 1036
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 272/532 (51%), Gaps = 13/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C P AAPK +W K ++ + R I +G L++ +S+ D G Y+C
Sbjct: 425 AARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCF 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + W+ +
Sbjct: 485 AENFMGKANSTG-ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDD 543
Query: 122 VRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I ++D +E ++ G L I NA +G Y C ++ V S T+ V GP
Sbjct: 544 FPI-DLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGP 602
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y I ART ++ W + + + E
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE--- 659
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 660 --GNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGG 717
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+W P R+ QN Y + +RKK E+ + + ++ V R S Y
Sbjct: 718 APNELIINWTPTLRDYQNGDGFGYILSFRKKGTQEWLTARVPHAESLHY-VYRNESIGPY 776
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK++A N G GPES ++SAE+ P+VAP V ++ S+ ++V+W P+E +
Sbjct: 777 TPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVE--QG 834
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++ G L+G+ I+YWK+ + EE A + A + GL P+TKY+V V AYN AG GP
Sbjct: 835 DMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGP 894
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +TV + W V +E + GYK+
Sbjct: 895 PSPSTNITTIKPPPRRPPGNISWT-LTGSTVTIKWDPVVAQADESAVTGYKM 945
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P +
Sbjct: 673 WMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPT--L 730
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
R+ G G+ + + K+ P +++Y+ R + P T + VK+
Sbjct: 731 RDYQNGDGFGYILSFRKKGTQEWLTARVPHAESLHYVYRNE-------SIGPYTPFEVKI 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
AYN GEGPES + + + P+ P V K + + + V+W V ++GY
Sbjct: 784 KAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGY 843
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++R W+ D D A D + G A + L+P +YH+ V A++ G G
Sbjct: 844 EIRYWK-DGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAG 893
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + I L I V +D G Y C
Sbjct: 245 YALTGQMVTLECFAFGNPVPRIKWRK---LDGSQTSQWISSEPLLHIQNVDFEDEGTYEC 301
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G D +GR+I+ P + + + A LR S A W +
Sbjct: 302 EAENIKGRDTYQGRIIIHAQPDWLDVI---TDTEADIGSDLRWSCVASGKPRPAVRWLRD 358
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + I + GG L + D+G Y+CV ++ G + + V+
Sbjct: 359 GQPLASQN-------RIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 68/176 (38%), Gaps = 29/176 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
VT+ C A P + WK +G + G R G+L+IS PV D+G Y C ATN
Sbjct: 52 VTLMCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNA 111
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P + IA + CS ++Y W N
Sbjct: 112 RGTVVSREASLRFGFLQEFSAEEREP--VKIAEGWGVMFTCSP-PPHYPGLSYRWLLN-- 166
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKIS 169
E PN I DG G L I +D G Y C S + I+
Sbjct: 167 ----------EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>gi|344266727|ref|XP_003405431.1| PREDICTED: contactin-1-like [Loxodonta africana]
Length = 1037
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 296/592 (50%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + + I+E+G+L I+ ++R+D GIY+C
Sbjct: 437 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSKVLIWEDGSLEINNITRNDGGIYTCF 496
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 497 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAAAADPALDLTFVWSFNG 555
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 556 YVIDFNKENTHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 615
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ +V TSA + W+ G+ N PI+ Y I +T + W + E
Sbjct: 616 GPPGGLRIEDVRATSAALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 671
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 672 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 730
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ ++G V + + T
Sbjct: 731 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMRPST 789
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ ++V W E + E
Sbjct: 790 AFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGIKVLSSSEMSVHW---EHVVEK 846
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ + G++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 847 V---VEGYQIRYWAAHDKEAAAHRVQVSSQEYSARLENLVPDTQYFVEVRACNSAGCGPP 903
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I I + + +TW +V E + GYKV +
Sbjct: 904 SDVTETFTRKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 961
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 962 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 1004
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 70 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQQDAGIYYCLASN 129
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 130 NYGMVRSIEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHYPDDLSYRWLLN 186
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 187 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 226
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVTI C P P W+K I SG KIF + +
Sbjct: 263 YALMGQNVTIECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 314
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D+ K R+ V P + E + + +L C A + + +
Sbjct: 315 DEGTYECEAENIKGKDKHKARIYVQAYPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 373
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 374 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 411
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 15/168 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 363 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTHGAIYA 413
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 414 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 468
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ + + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 469 -SSKVLIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 515
>gi|405975991|gb|EKC40516.1| Contactin [Crassostrea gigas]
Length = 1161
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 281/559 (50%), Gaps = 29/559 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDS 55
A GN+TI C PEAAP P W K+G + G+ ++ NG L I VS D+
Sbjct: 595 AANNGNLTIPCMPEAAPVPMISWLKNGGKLSLPITDGNQKGAQLLSNGYLKIVGVSMVDA 654
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVA 114
G+Y+C A N +G S G + V+ G + QL P++ + + + + C + +D+
Sbjct: 655 GLYTCVAANQNGESMSTGNVTVVGGVTIVTQLFPEMRVNKNDTVFIECQVSYDIFRVDLV 714
Query: 115 YIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
+W NG I D ++ + I G + + + +G YECV ST+ + S T
Sbjct: 715 LVWKFNGRIIDFTQDFFYEKSTRMGISGLFIHFID--YYHSGVYECVAMSTITQSSISTN 772
Query: 174 VIVEGPPGLPGGVQVVEVHKT--SATIQWTDGATNGRPITHYKIIARTNWNSTW----FN 227
VIV+GPPG+PG V ++ +T S TI+WT+ +G I Y I ART N W N
Sbjct: 773 VIVQGPPGMPGNVYRIKGSETTRSVTIKWTEPPDHGSQIQQYNIEARTMDNPKWRPVATN 832
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL-GYGEPSSPSPQYNTPADK 286
+S+ + + + +++ ++ LVP+++Y+F+V+A N GE S PS D
Sbjct: 833 LSDFNVLIPGNLDSDKRQYTVTG-LVPFNSYQFRVVARNRFPQLGEYSKPSEYIQLKPDV 891
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEY-- 343
P + +GGGGG G L+ISW L E++ PNI Y ++WRK TE FQ +TL E
Sbjct: 892 PVVSVQNVGGGGGSEGVLTISWRLLAEEERCGPNIGYNVYWRKNGTTEEFQMKTLLETDH 951
Query: 344 -------GNVGIAVVRIPSE-FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
GN V + S+ +Y YEVK+ N G GP S ++S+E +P + P
Sbjct: 952 MFQKMVSGNSVSYTVNLNSDKLFYLPYEVKIGVFNKYGRGPNSTSTVVYSSEGIPLLRPT 1011
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V NSTA+ VTW+P+ R+ I+G + G I ++ +V
Sbjct: 1012 NVNGWEINSTALWVTWDPLPNTRDAIKGVIQGFEINVEDANDANRKSVTAYHYGYMEGNN 1071
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
++GL+P+T Y+V V +N AGE SE+ L T P P V I P +V+V WR
Sbjct: 1072 VIGLEPNTDYWVTVQIFNTAGESNPSEKQLLGTCLNPPLLYPEFVTIHSHGPNSVYVEWR 1131
Query: 516 YVSPSFEEEPIIGYKVRVW 534
VS EE + GYKV V+
Sbjct: 1132 GVSTGLFEETLRGYKVMVF 1150
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 17/173 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTA 62
E ++T C A+P+ +VW K+ +I SG +I+ N + + R G+YSC A
Sbjct: 503 ENSDITWRCEGIASPRASYVWYKNARLITSGTDGIEIYSNVLKIKNLQKRIHDGMYSCEA 562
Query: 63 TNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHR-NLQLRCSAHTEELLDVAYIWTHN 120
TN+HG S +L VL PS+ + P+ +AA+ NL + C + ++ W N
Sbjct: 563 TNIHGSSVSSAQLKVLSFKPSFAKNPLPRTILAANNGNLTIPCMPEAAPVPMIS--WLKN 620
Query: 121 GVRI------GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
G ++ GN +L + G L+I S DAG Y CV + G+
Sbjct: 621 GGKLSLPITDGNQKGAQL------LSNGYLKIVGVSMVDAGLYTCVAANQNGE 667
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIF--ENGNLLISPVS-RDDSGIYSCTA 62
+I C P+P++VW + ++ GS G+ + + NG L + + R D+GIY C A
Sbjct: 207 SIECEATGIPQPRYVWHRT-DVTGSEEVIGKSEFYTISNGKLTFNRIDERRDAGIYHCEA 265
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+N G S I + + + P + +A ++ L C+ T + V+Y W G
Sbjct: 266 SNKFGSVRSAPSKITFGSLAQFPNVAPGVNRVALYQGTYLNCNPPTHKPA-VSYQWM-KG 323
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
LN ++ DG L + D G Y C+V
Sbjct: 324 TSFLIQALNSYFF--LSADGNLY-FSEVQQNDEGNYHCIV 360
>gi|440911548|gb|ELR61203.1| Contactin-5, partial [Bos grunniens mutus]
Length = 1007
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 284/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 407 VIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYICRGENVFG 466
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 467 SAEITATVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDFE 525
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 526 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIV 585
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 586 IVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGDMES 640
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I
Sbjct: 641 AMAVELNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVI 700
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + + R S T +EVKV
Sbjct: 701 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 759
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + I+E++ GR
Sbjct: 760 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKATSVSVSEILVAW---KHIKESL-GRPQ 815
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I Y K+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 816 GFEIGYRKDMEQEDAAETVKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSA 875
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T + P + P+ + + + + + W V P E ++GYKV + S+ +T
Sbjct: 876 ATKKSPPSQAPNNLRWEQ-QGSQLSLGWDPVRPLANESEVMGYKVFYRQEGHSNSQVIET 934
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALY- 605
P +V L Y + V A+ GGDG SS I + S AL+
Sbjct: 935 QKPQA------VVPLPDAGVYIIEVRAYGEGGDGTASS-QIRVPSYSGGKITSAQSALHT 987
Query: 606 ---SASTTLLLVM 615
S+S TLLL +
Sbjct: 988 LSMSSSVTLLLAL 1000
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 220 AAKGTTVKMECFALGNPVPTITWMKINGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 278
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 279 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 335
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ + L I + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 336 LPL-------LLQSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAP 388
>gi|213625300|gb|AAI70294.1| Contactin/F3/F11 [Xenopus laevis]
Length = 1005
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 285/590 (48%), Gaps = 41/590 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPK KF W K ++ + R I+++G+L I+ +++ D G Y+C
Sbjct: 412 AAKGGRVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCF 471
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P + N ++C A + L++ +IW NG
Sbjct: 472 AENDRGKANSTG-IVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNG 530
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + E N+ G L I NA AG Y C ++ V S ++V GPP
Sbjct: 531 FPIEFDKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPP 590
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV+V E+ TS + W+ G N +PI+ Y I A+ + W +V E
Sbjct: 591 GPPGGVRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNI 645
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+VIA N LG GEPS PSP+ T P AP+ +GGGGG
Sbjct: 646 EGNMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGS 705
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY- 359
+L+I+W+PL RE Y + ++ N E++ +V P +Y
Sbjct: 706 NRELTITWQPLSREYHYGDGFGYGVAFKPFNGREWRK-----------VIVTNPESGHYV 754
Query: 360 ---------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
T+++VKV+A N +G GP S V ++SAED+P AP V +S+ ++V
Sbjct: 755 HKDDTITPATQFQVKVKAFNKIGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVA 814
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
W+P+ + G++++YW+ + E A + + + GL P+T Y ++V
Sbjct: 815 WHPV------YEKSIEGYQVRYWRIQDKEAAAHRVQVKASDITTRLEGLMPNTHYNIEVR 868
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A+N+AG+GP S+ T + P + P + +TW +V P E + GYK
Sbjct: 869 AFNSAGDGPPSKTLTFLTKKAPPSQIPQITSAVRYGSQYI-ITWEHVVPLSNESAVNGYK 927
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
V QD R ++++ + + Y + V A S GGDG
Sbjct: 928 VL---YRQDGQRDGKLYSTRKHSVELPVPEEG---VYVVEVRAHSEGGDG 971
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 249/631 (39%), Gaps = 89/631 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P+P W KDG G G+++ ++ +D+G+Y C A N
Sbjct: 331 GSDLHWACVARGKPQPSIRWLKDGAPYG---------KGDIIKRGLTLEDAGMYQCIAEN 381
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+HG+ + L +L +E P + + A + ++ + + W+
Sbjct: 382 IHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKG---- 437
Query: 125 GNMDLNELETPNINI---DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
EL N + D G LEITN + D G Y C ++ GK ++ V V
Sbjct: 438 -----TELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVT---- 488
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WNSTWFNVSEHVIGKEVDRY 240
+ + ++A + + AT +H + T W F + E D+
Sbjct: 489 ---AATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPI-------EFDKE 538
Query: 241 TGRKEASIENVLVPWSTYEFK----VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
G E +I NV+ S K + AG + + + G
Sbjct: 539 DGHYERAIRNVV--GSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGV 596
Query: 297 GGGKIGDLSI--SW-------EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+I D S+ +W +P+ + A NI + W+ + ++E GN+
Sbjct: 597 RVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSED-WK-----DVKTENPNIEGNME 650
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+A R+ + +YE +V A N +G G P I + P VAP V G ++
Sbjct: 651 MA--RVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRE 708
Query: 407 INVTWNPIELIRENIRGRLIGHRIKY-------WKE---DNPEETAVYYLSRTTRNWALI 456
+ +TW P L RE G G+ + + W++ NPE + T
Sbjct: 709 LTITWQP--LSREYHYGDGFGYGVAFKPFNGREWRKVIVTNPESGHYVHKDDT------- 759
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
+ P T++ VKV A+N GEGP S + + P + P+AV ++ + V V W
Sbjct: 760 --ITPATQFQVKVKAFNKIGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHP 817
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
V E+ I GY+VR W + QD A + + + + L P Y++ V AF++
Sbjct: 818 VY----EKSIEGYQVRYWRI-QDKEAAAHRVQVKASDITTRLEGLMPNTHYNIEVRAFNS 872
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGSPALYSA 607
GDG P+ T +K S P + SA
Sbjct: 873 AGDG---PPSKTLTFLTKKAPPSQIPQITSA 900
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 33/169 (19%)
Query: 7 NVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
NVT+ C P P W+K I SG KIF V +D G Y
Sbjct: 244 NVTLECFALGNPVPVITWRKINEAMPASAEISMSGAVLKIFN--------VQPEDEGTYE 295
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G+D + + V P + E + +L C A + + W
Sbjct: 296 CEAKNIKGLDNHRAYVYVEGVPEWVEHI-NDTERDIGSDLHWACVARGKPQPSIR--WLK 352
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+G G D+ I GL + DAG Y+C+ ++ G I
Sbjct: 353 DGAPYGKGDI---------IKRGL------TLEDAGMYQCIAENIHGII 386
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 11/163 (6%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A P P + W+K+ I GNL+I +P DSG Y C +N
Sbjct: 43 GKVSVNCRARANPPPIYKWRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSN 102
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
++G S+ + Y + P ++ + L C D+ Y W N
Sbjct: 103 IYGKVWSREATLNF---GYLDPFPTEERYEVKVKEGTGAVLICDPPPHVPDDLNYRWLLN 159
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ N N G L I D G Y C V S
Sbjct: 160 EFPVFLSPDNRRFVTQTN---GNLYIAKVEHLDRGNYSCFVSS 199
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 7/184 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + C+P ++ N + RR + + NGNL I+ V D G Y
Sbjct: 134 EGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNY 193
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
SC ++ + I L + + P + T + + + + + +
Sbjct: 194 SCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALG 253
Query: 119 HNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I +NE + I++ G +L+I N D G YEC K+ G + + V V
Sbjct: 254 NPVPVITWRKINEAMPASAEISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYV 313
Query: 177 EGPP 180
EG P
Sbjct: 314 EGVP 317
>gi|334322026|ref|XP_001371582.2| PREDICTED: contactin-2-like [Monodelphis domestica]
Length = 1205
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 291/583 (49%), Gaps = 22/583 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P +APK +W K I+ + R I +G L++ +SR D G Y+C
Sbjct: 594 AARGGEVIIPCQPRSAPKSIVLWSKGTEILVNSSRVTITPDGTLILRNISRSDEGKYTCF 653
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + W+ +G
Sbjct: 654 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGENLTLQCHASHDPTMDLTFTWSLDG 712
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S T++V GPP
Sbjct: 713 FPIDFDKSGGHYRRANLKETIGDLTILNAQLRHGGKYTCMAQTVVDSTSETATLLVRGPP 772
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + AR+ + W V + E
Sbjct: 773 GPPGGVVVRDISNTTVQLTWSRGFDNHSPIAKYILQARSLPDGKWKQVRTNPANIE---- 828
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 829 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKESAPTIAPSGLSGGGGA 887
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L I+W+P+ RE QN Y + +R++ +++Q + + + V R S YT
Sbjct: 888 PGELIINWKPMLREYQNGEGFGYILSFRRQGSSDWQRAKVSQADALHF-VYRNESVRPYT 946
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK++ N G GPES ++SAE+ P+VAP V ++G S+ +NV W P+ +++
Sbjct: 947 PFEVKIRGYNRQGEGPESLTTLVYSAEEEPRVAPAKVKAKGTLSSEMNVMWEPVH--QDD 1004
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK+ + E A + A + GLQP+TKY+V V AYN AG GP
Sbjct: 1005 MNGILLGYEIRYWKDGDKEAAADRVRTAGLDTSAQVTGLQPNTKYHVTVRAYNRAGTGPA 1064
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S T + P +PP + + +++ + W V P E + GYK+ +
Sbjct: 1065 SPSTNATTMKPPPNRPPGNISWT-LASSSLIIKWDPVIPQRNESAVTGYKM--------L 1115
Query: 541 SRANDTIIPVGNTLDADIVDLS-PGKRYH--MRVLAFSNGGDG 580
R + +P + + + +++S P H +++ A GGDG
Sbjct: 1116 YRNDLHSVPTLHLSNKNWIEISVPEDSSHALVQIRATGPGGDG 1158
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P +AP G+ G + + W P ++
Sbjct: 842 WMDYEFRVLASNILGTGEPSGPSSKIRTKESAPTIAPSGLSGGGGAPGELIINWKP--ML 899
Query: 418 RENIRGRLIGHRIKYWKEDNP--------EETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + + A++++ R ++P T + VK+
Sbjct: 900 REYQNGEGFGYILSFRRQGSSDWQRAKVSQADALHFVYRNE-------SVRPYTPFEVKI 952
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YN GEGPES L + + P+ P+ V KG + ++V W V ++GY
Sbjct: 953 RGYNRQGEGPESLTTLVYSAEEEPRVAPAKVKAKGTLSSEMNVMWEPVHQDDMNGILLGY 1012
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D D A D + G A + L P +YH+ V A++ G G S
Sbjct: 1013 EIRYWK-DGDKEAAADRVRTAGLDTSAQVTGLQPNTKYHVTVRAYNRAGTGPASPSTNAT 1071
Query: 590 QMGEEKEFKSGSPALYSASTTLLL 613
M G+ + AS++L++
Sbjct: 1072 TMKPPPNRPPGNISWTLASSSLII 1095
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + + + L I +S +D G Y C
Sbjct: 414 YALVGQQVTLECFAFGNPVPRIKWRKMDDSLPP---QWATAEPTLQIPSISFEDEGTYEC 470
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G D +KGR+IV P + + + NL C+A + V W N
Sbjct: 471 EAENIKGRDIAKGRIIVQAKPEWLKVISDS-EADIGSNLHWGCAAAGKPRPIVR--WLRN 527
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + L + I GG L+ + D+G Y+CV ++ G I + V+
Sbjct: 528 GDPL-------LSQNRVEISGGDLKFSKLVLEDSGMYQCVAENKHGTIYASAELAVQA 578
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G+ + S R +I G+L S + +DSG+Y C A N
Sbjct: 505 GSNLHWGCAAAGKPRPIVRWLRNGDPLLSQNRVEI-SGGDLKFSKLVLEDSGMYQCVAEN 563
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P K I A R ++ +W+
Sbjct: 564 KHGTIYASAELAVQAFAPDFRLNPVKRLIPAARGGEVIIPCQPRSAPKSIVLWSK----- 618
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G L I DG L+ + N S +D G+Y C ++ +GK ++
Sbjct: 619 GTEILVNSSRVTITPDGTLI-LRNISRSDEGKYTCFAENFMGKANS 663
>gi|147898733|ref|NP_001079338.1| contactin 1 precursor [Xenopus laevis]
gi|1843425|dbj|BAA13100.1| contactin/F3/F11 [Xenopus laevis]
Length = 1005
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/590 (31%), Positives = 285/590 (48%), Gaps = 41/590 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPK KF W K ++ + R I+++G+L I+ +++ D G Y+C
Sbjct: 412 AAKGGRVIIECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCF 471
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P + N ++C A + L++ +IW NG
Sbjct: 472 AENDRGKANSTG-IVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNG 530
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + E N+ G L I NA AG Y C ++ V S ++V GPP
Sbjct: 531 FPIEFDKEDGHYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPP 590
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV+V E+ TS + W+ G N +PI+ Y I A+ + W +V E
Sbjct: 591 GPPGGVRVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVK-----TENPNI 645
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+VIA N LG GEPS PSP+ T P AP+ +GGGGG
Sbjct: 646 EGNMEMARVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGS 705
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY- 359
+L+I+W+PL RE Y + ++ N E++ +V P +Y
Sbjct: 706 NRELTITWQPLSREYHYGDGFGYGVAFKPFNGREWRK-----------VIVTNPESGHYV 754
Query: 360 ---------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
T+++VKV+A N +G GP S V ++SAED+P AP V +S+ ++V
Sbjct: 755 HKDDTITPATQFQVKVKAFNKIGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVA 814
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
W+P+ + G++++YW+ + E A + + + GL P+T Y ++V
Sbjct: 815 WHPV------YEKSIEGYQVRYWRIQDKEAAAHRVQVKASDITTRLEGLMPNTHYNIEVR 868
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A+N+AG+GP S+ T + P + P + +TW +V P E + GYK
Sbjct: 869 AFNSAGDGPPSKTLTFLTKKAPPSQIPQITSAVRYGSQYI-ITWEHVVPLSNESAVNGYK 927
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
V QD R ++++ + + Y + V A S GGDG
Sbjct: 928 VL---YRQDGQRDGKLYSTRKHSVELPVPEEG---VYVVEVRAHSEGGDG 971
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 249/631 (39%), Gaps = 89/631 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P+P W KDG G G+++ ++ +D+G+Y C A N
Sbjct: 331 GSDLHWACVARGKPQPSIRWLKDGAPYG---------KGDIIKKGLTLEDAGMYQCIAEN 381
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+HG+ + L +L +E P + + A + ++ + + W+
Sbjct: 382 IHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVIIECKPKAAPKAKFSWSKG---- 437
Query: 125 GNMDLNELETPNINI---DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
EL N + D G LEITN + D G Y C ++ GK ++ V V
Sbjct: 438 -----TELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKANSTGIVSVT---- 488
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WNSTWFNVSEHVIGKEVDRY 240
+ + ++A + + AT +H + T W F + E D+
Sbjct: 489 ---AATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPI-------EFDKE 538
Query: 241 TGRKEASIENVLVPWSTYEFK----VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
G E +I NV+ S K + AG + + + G
Sbjct: 539 DGHYERAIRNVV--GSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGV 596
Query: 297 GGGKIGDLSI--SW-------EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+I D S+ +W +P+ + A NI + W+ + ++E GN+
Sbjct: 597 RVEEIRDTSVKLTWSSGTDNHQPISKYNIQAQNILSED-WK-----DVKTENPNIEGNME 650
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+A R+ + +YE +V A N +G G P I + P VAP V G ++
Sbjct: 651 MA--RVIDLIPWMDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRE 708
Query: 407 INVTWNPIELIRENIRGRLIGHRIKY-------WKE---DNPEETAVYYLSRTTRNWALI 456
+ +TW P L RE G G+ + + W++ NPE + T
Sbjct: 709 LTITWQP--LSREYHYGDGFGYGVAFKPFNGREWRKVIVTNPESGHYVHKDDT------- 759
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
+ P T++ VKV A+N GEGP S + + P + P+AV ++ + V V W
Sbjct: 760 --ITPATQFQVKVKAFNKIGEGPYSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHP 817
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
V E+ I GY+VR W + QD A + + + + L P Y++ V AF++
Sbjct: 818 VY----EKSIEGYQVRYWRI-QDKEAAAHRVQVKASDITTRLEGLMPNTHYNIEVRAFNS 872
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGSPALYSA 607
GDG P+ T +K S P + SA
Sbjct: 873 AGDG---PPSKTLTFLTKKAPPSQIPQITSA 900
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 33/169 (19%)
Query: 7 NVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
NVT+ C P P W+K +I SG KIF V +D G Y
Sbjct: 244 NVTLECFALGNPVPVITWRKINEAMPASADISMSGAVLKIFN--------VQPEDEGTYE 295
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G+D + + V P + E + +L C A + + W
Sbjct: 296 CEAKNIKGLDNHRAYVYVEGVPEWVEHI-NDTERDIGSDLHWACVARGKPQPSIR--WLK 352
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+G G D+ I GL + DAG Y+C+ ++ G I
Sbjct: 353 DGAPYGKGDI---------IKKGL------TLEDAGMYQCIAENIHGII 386
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 58/163 (35%), Gaps = 11/163 (6%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C P P + W+K+ I GNL+I +P DSG Y C +N
Sbjct: 43 GKVSVNCRARGNPPPIYKWRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSN 102
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
++G S+ + Y + P ++ + L C D+ Y W N
Sbjct: 103 IYGKVWSREATLNF---GYLDPFPTEERYEVKVKEGTGAVLICDPPPHVPDDLNYRWLLN 159
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ N N G L I D G Y C V S
Sbjct: 160 EFPVFLSPDNRRFVTQTN---GNLYIAKVEHLDRGNYSCFVSS 199
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 7/184 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + C+P ++ N + RR + + NGNL I+ V D G Y
Sbjct: 134 EGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNLYIAKVEHLDRGNY 193
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
SC ++ + I L + + P + T + + + + + +
Sbjct: 194 SCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRALKDQNVTLECFALG 253
Query: 119 HNGVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I +NE + +I++ G +L+I N D G YEC K+ G + + V V
Sbjct: 254 NPVPVITWRKINEAMPASADISMSGAVLKIFNVQPEDEGTYECEAKNIKGLDNHRAYVYV 313
Query: 177 EGPP 180
EG P
Sbjct: 314 EGVP 317
>gi|426244438|ref|XP_004016029.1| PREDICTED: contactin-5 [Ovis aries]
Length = 1025
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 283/610 (46%), Gaps = 21/610 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 425 VIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 484
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P K + ++ L C A + LDV + WT G I
Sbjct: 485 SAEITATVSVKE-PTRIELTPKKTELTVGESIVLNCKAIHDPSLDVTFYWTLKGQPIDFE 543
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 544 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIV 603
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 604 IVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPETITGDMES 658
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I
Sbjct: 659 AMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVI 718
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 719 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 777
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + I+E++ GR
Sbjct: 778 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKATSVSVSEILVAW---KHIKESL-GRPQ 833
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I Y K+ E+ A +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 834 GFEIGYRKDMEQEDAAETVKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSA 893
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T + P + P+ + + + + + W V P E ++GYKV + S+ +T
Sbjct: 894 ATKKSPPSQAPNNLRWEQ-QGSQLSLGWDPVRPLANESEVMGYKVFYRQEGHSNSQVIET 952
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMGEEKEFKSGSPAL 604
P +V L Y + V A+ GGDG SS ++ G+ +S L
Sbjct: 953 QKPQA------VVPLPDAGVYIIEVRAYGEGGDGTASSQIRVPSYSGGKITSAQSALRTL 1006
Query: 605 YSASTTLLLV 614
+S+ +LL+
Sbjct: 1007 SMSSSVMLLL 1016
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 238 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQ-AVLEIPNVQLDDAGIYECR 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + +L+ C A + Y W NG
Sbjct: 297 AENSRGKNTFRGQLQVYTYPHWVEKL-NDTQLDSGSHLRWECKATGKP--RPTYRWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 354 VPL-------LLQSRVEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAP 406
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C A N
Sbjct: 45 VALNCEARGNPVPNYRWLRNGTEIDLESDYRYSLIDGAFIISNPSEAKDSGHYQCLAANT 104
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ ++ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 105 FGTILSREVILQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPPHSPEII---YSWVFNEF 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 162 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 201
>gi|345797925|ref|XP_003434377.1| PREDICTED: contactin-2 [Canis lupus familiaris]
Length = 1016
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 267/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 406 AARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 465
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I +L L+C A + +D+ +IWT +
Sbjct: 466 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDD 524
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 525 FPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 584
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V + T+ + W+ G N PI Y + ART W V + E
Sbjct: 585 GPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 640
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 641 -GNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 699
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+PRE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 700 PGELILNWTPVPREYQNGDGFGYLLSFRRQGGSGWQTARVPG-ADAQHFVYSNDSVRPYT 758
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES + SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 759 PFEVKIRSYNRRGDGPESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 815
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL PDTKY+V + AYN AG GP
Sbjct: 816 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTGLHPDTKYHVTIRAYNRAGTGPT 875
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +T+ + W V P E + GYK+
Sbjct: 876 SPSANATTMKPPPQRPPDNISWT-FSSSTLSIKWDPVVPFRNESAVTGYKM 925
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P+
Sbjct: 654 WMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELILNWTPVP-- 711
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ P A +++ ++P T + VK+
Sbjct: 712 REYQNGDGFGYLLSFRRQGGSGWQTARVPGADAQHFVYSND-------SVRPYTPFEVKI 764
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 765 RSYNRRGDGPESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 823
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ + A++ G G S A
Sbjct: 824 EIRYWKAG-DKEAAADRVRTAGLDTSARVTGLHPDTKYHVTIRAYNRAGTGPTSPSANAT 882
Query: 590 QM 591
M
Sbjct: 883 TM 884
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 317 GSNLRWGCAAAGKPRPTVRWLRNGEPLTSQSRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 375
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P K I A R ++ +W+
Sbjct: 376 KHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVVLWSK----- 430
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G L + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 431 GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAENFMGKANS 475
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I +S +D G Y C
Sbjct: 226 YALVGQQVTLECFAFGNPVPQIKWRK---VDGSLSPQWATAEPTLQIPSISFEDEGTYEC 282
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + NL+ C+A + V W N
Sbjct: 283 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDMEADIGSNLRWGCAAAGKPRPTVR--WLRN 339
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 340 GEPLTSQS-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 390
>gi|449272003|gb|EMC82133.1| Contactin-1, partial [Columba livia]
Length = 946
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 288/582 (49%), Gaps = 25/582 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R +I+++G+L I +++ D G Y+C
Sbjct: 387 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGTRIRIWDDGSLEIVNITKLDEGRYTCF 446
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 447 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 505
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 506 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 565
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG++V E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 566 GPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIE---- 621
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PS + T P APS +GGGGG
Sbjct: 622 -GNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGS 680
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ +G V + S T
Sbjct: 681 NRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPST 739
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N+ G GP S I+SA+D P P V + +S+ ++V+W+ +
Sbjct: 740 QYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSIKVLSSSEMSVSWHHVS----- 794
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y+V V A+N+AG GP
Sbjct: 795 -DKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPP 853
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S R ++ RKAP Q+P ++ + + +TW +V E + GYKV
Sbjct: 854 S-RTIDVITRKAPPSQRPRIISSVR--SGSRYIITWDHVEAKSNESAVEGYKVL---YRP 907
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
D + +T++ V + Y + V A S GGDG
Sbjct: 908 DGQHEGELFSTGKHTIE---VPVPSDGEYVVEVRAHSEGGDG 946
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 27/165 (16%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L + ++ DD+G+Y C A N HG+ +
Sbjct: 313 CVATGKPMPTIRWLKNG---------ASFRKGELRMQSLTFDDAGMYQCIAENTHGIIYA 363
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH------NGVRIG 125
L ++ P +E P K I A + ++ + + W+ NG RI
Sbjct: 364 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGTRIR 423
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
D G LEI N + D G Y C ++ GK ++
Sbjct: 424 IW------------DDGSLEIVNITKLDEGRYTCFAENNRGKANS 456
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 73/188 (38%), Gaps = 34/188 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 213 YALLGQNVTLECFALGNPVPELRWSKYLEPMPASAEISMSGAVLKIFN--------IQYE 264
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N G D+ + R+ V P + E + +L C A + + +
Sbjct: 265 DEGLYECEAENYKGKDKHQARIYVQAAPEWVEHI-NDTEKDIGSDLYWPCVATGKPMPTI 323
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NG + G L + + +F DAG Y+C+ ++T G I
Sbjct: 324 R--WLKNGA---------------SFRKGELRMQSLTFDDAGMYQCIAENTHGIIYANAE 366
Query: 174 V-IVEGPP 180
+ IV PP
Sbjct: 367 LKIVASPP 374
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+I +P D+G Y C +N
Sbjct: 21 GQVSMNCRARAIPFPTYRWKLNNWDIDLTKDRYSMVGGRLVINNPEKSRDAGKYVCVVSN 80
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 81 IFGTVRSYEATLSF---GYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 137
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 138 EFPVFIALDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 177
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A ++ L P +Y +++A N G G P RT P PS V G + + +
Sbjct: 627 ATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTI 686
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
TW +S + GY V +++ R T +G + D + P +Y ++V
Sbjct: 687 TWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKD-ESMPPSTQYQVKV 745
Query: 572 LAFSNGGDGRMSSPAITF 589
AF+N GDG S A+ +
Sbjct: 746 KAFNNKGDGPFSLTAVIY 763
>gi|197098330|ref|NP_001124990.1| contactin-2 precursor [Pongo abelii]
gi|55726609|emb|CAH90069.1| hypothetical protein [Pongo abelii]
Length = 1040
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 ADNFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPQRPPGDISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|291402553|ref|XP_002717495.1| PREDICTED: contactin 2 [Oryctolagus cuniculus]
Length = 1040
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 268/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG VTI C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEVTIPCQPRAAPKAVVLWSKGTEILANSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ +IWT +
Sbjct: 490 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFIWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ TS + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTSVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG G+PS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVLASNILGTGKPSGPSSRIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ +Q+ + + V S YT
Sbjct: 724 PGELVVNWTPMSREYQNGDGFGYLLSFRRQGSASWQTAQVSG-ADAQYFVYSNESIQPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+V P ++++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YW+ + E A + AL+ GL P+TKY+V V AYN AG GP
Sbjct: 840 VNGILLGYEIRYWRVGDKEAAADRVRTAGLDTSALVTGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPQRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVLASNILGTGKPSGPSSRIRTKEAAPSVAPSGLSGGGGAPGELVVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
RE G G+ + + W+ Y + + +QP T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSASWQTAQVSGADAQYFVYSNES------IQPYTPFEVKIR 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+YN G+GPES L + + P+ P+ + KG++ + ++VTW V ++GY+
Sbjct: 790 SYNRRGDGPESLTALVYSAEEEPKVVPTKIWAKGVSSSEMNVTWEPVQQDVNGI-LLGYE 848
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
+R W V D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 849 IRYWRVG-DKEAAADRVRTAGLDTSALVTGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALAGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVSAGDLRFSRLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 30/193 (15%)
Query: 5 GGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSC 60
G V + CNP A P + W + N I + GR + + GNL I+ + D G YSC
Sbjct: 148 GWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSC 207
Query: 61 TATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAHT 107
AT+ MD S + L PS + P + A + + L C A
Sbjct: 208 LATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPAETYALAGQQVTLECFAFG 265
Query: 108 EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ RI ++ +P L+I + SF D G YEC +++ G+
Sbjct: 266 NPV-----------PRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKGR 314
Query: 168 ISTKTTVIVEGPP 180
+ + +IV+ P
Sbjct: 315 DTVQGRIIVQAQP 327
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVMLACRARASPPATYRWKMNGTEMKLAPGSRHQLMGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTHAGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|63329|emb|CAA68753.1| precontactin (AA -20 to 1071) [Gallus gallus]
Length = 1091
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 291/590 (49%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R I+++G+L I V++ D G Y+C
Sbjct: 417 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCF 476
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 477 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 535
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 536 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 595
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 596 GPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDI 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PS + T P APS +GGGGG
Sbjct: 651 EGNMESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGS 710
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ +G V + S T
Sbjct: 711 NRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPST 769
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N G GP S I+SA+D P P V + +S+ I+V+W+ +
Sbjct: 770 QYQVKVKAFNSKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHV------ 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y++ V A+N+AG GP
Sbjct: 824 TEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHIDVSAFNSAGYGPP 883
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S R ++ RKAP Q+P ++ + + +TW +V E + GYKV Q
Sbjct: 884 S-RTIDIITRKAPPSQRPRIISSVR--SGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQ 940
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T +T++ V + Y + V A + GGDG ++ I+
Sbjct: 941 HEGKLFST---GKHTIE---VPVPSDGEYVVEVRAHNEGGDGEVAQIKIS 984
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 34/188 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 243 YALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFN--------IQYE 294
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N G D+ + R+ V P + E + +L C A + + +
Sbjct: 295 DEGLYECEAENYKGKDKHQARVYVQASPEWVEHI-NDTEKDIGSDLYWPCVATGKPIPTI 353
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NGV + G L I +F DAG Y+C+ ++ G I
Sbjct: 354 R--WLKNGV---------------SFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANAE 396
Query: 174 V-IVEGPP 180
+ IV PP
Sbjct: 397 LKIVASPP 404
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L I ++ +D+G+Y C A N HG+ +
Sbjct: 343 CVATGKPIPTIRWLKNG---------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYA 393
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L ++ P +E P K I A + ++ + + W+ + N
Sbjct: 394 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS--- 450
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIST 170
I+I D G LEI N + D G Y C ++ GK ++
Sbjct: 451 ----RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANS 486
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+IS P D+G Y C +N
Sbjct: 51 GQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLVISNPEKSRDAGKYVCVVSN 110
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 111 IFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 167
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 168 EFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 207
>gi|402857489|ref|XP_003893286.1| PREDICTED: contactin-2 [Papio anubis]
Length = 1040
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L +SW P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVSWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPDNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V+W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVSWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN GEGPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|410920629|ref|XP_003973786.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1022
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 257/529 (48%), Gaps = 16/529 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG + C P A+P+ W + G ++ R+ I ++G L I+ +S+ D+G Y+C A N
Sbjct: 425 GGEAVLECRPRASPRAAISWWRGGQLLMDAERQTIMDDGTLRITNISKADAGRYTCVARN 484
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++L L C ++ L+ + W NG I
Sbjct: 485 HFGSSSSTGTLVVKE-PTRITVPPLSLDVTTGQSLVLPCEVSSDSSLNPKFKWFFNGKAI 543
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
E G L+ + N +G+Y C+V + V +S + V GPPG P
Sbjct: 544 DFSRQEHFEMIGKGFAGDLM-VRNIQLKHSGKYVCMVHTEVDTVSAAAELTVRGPPGAPE 602
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
G+ V + ++ + W G N P+T Y + ART ++ W + D G+
Sbjct: 603 GLAVTHITDSTVQLSWGSGPDNHSPVTMYMVQARTPFSIGW-----QTVATVPDSVPGQM 657
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ L PW YEF+V+A N +G GEPS+ + Q T A P AP + GGGG G+L
Sbjct: 658 MHATVKGLNPWVDYEFRVVAINSVGVGEPSTRTKQIRTKAAVPKVAPVSVSGGGGARGEL 717
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+WEP+ E Q + Y + +R + + +T+ + + + T++EV
Sbjct: 718 VITWEPVSEEHQGGEDFGYVMAFRPVGSSTW-IQTVVASPEASRYIYKDDNIAPLTQFEV 776
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KV N G G S VV +FSAE+ P AP V++R +++ I V W I + RG+
Sbjct: 777 KVGVYNSNGEGQFSHVVRVFSAEEEPSEAPSSVWARAASASEIEVHWKRIP--PGSSRGK 834
Query: 425 LIGHRIKYWKE-DNPEETA-VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
++ + I +W++ P E V +S TT AL+ GL+ +T Y + V A N+AG GP S
Sbjct: 835 ILAYEILFWEDGSRPSEAGRVRIISATT---ALLSGLKANTAYQISVRAQNSAGFGPGSA 891
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
++ T + P +PP + K N + + + W +V E + GYKV
Sbjct: 892 AFIVTTKKPPPNRPPENIEWKLTN-SKIFLNWEHVKTMENESEVTGYKV 939
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G ++ + GR +I + G L IS +S DSG+Y C A N HG +
Sbjct: 340 CKAMGNPRPTYKWLKNGQMLTAEGRARI-DAGKLTISRISLLDSGMYQCVAQNEHGSIYA 398
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ P + P K + R + A W G + + +
Sbjct: 399 SAELKVVASPPDFTLRPVKKSTVVQRGGEAVLECRPRASPRAAISWWRGGQLLMDAERQT 458
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ +D G L ITN S ADAG Y CV ++ G S+ T++V+ P
Sbjct: 459 I------MDDGTLRITNISKADAGRYTCVARNHFGSSSSTGTLVVKEP 500
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 19/183 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCT 61
+G +V + C P P W++ DGN + G+ KI + +L P R +D+G+Y C
Sbjct: 240 KGSSVKLECFALGNPVPSISWRRADGNPLP--GKIKINHSAGVLEIPYFRPEDAGVYECV 297
Query: 62 ATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
A N G + ++G+L+ V H ++ IA LQ C A Y W
Sbjct: 298 AENSRGRNVARGQLLFQNVEH--LHWLHTLRDADIAIDAGLQWECKAMGNP--RPTYKWL 353
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVE 177
NG + ID G L I+ S D+G Y+CV ++ G I + +V
Sbjct: 354 KNGQML-------TAEGRARIDAGKLTISRISLLDSGMYQCVAQNEHGSIYASAELKVVA 406
Query: 178 GPP 180
PP
Sbjct: 407 SPP 409
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 17/167 (10%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
V I C + P P + W +G I G GNLLI+ P + G+Y C ATN
Sbjct: 44 QVFINCRAKGNPPPHYRWTVNGRAITAESGPNYSLVEGNLLITNPHVVNHRGVYQCIATN 103
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
G S+ + ++ E K +++ + + L C H E + Y W
Sbjct: 104 TFGTIVSREAKVEF---AFLENFSGKPRNTVSVREGQAVVLLCGPPLHYGE---IKYSWV 157
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
NG R L + I+ G L I +D G Y C V++ +
Sbjct: 158 FNGQR---SFLQQDARRFISQRTGDLYIAKVEASDVGNYTCAVRNMM 201
>gi|348578147|ref|XP_003474845.1| PREDICTED: contactin-2-like [Cavia porcellus]
Length = 1041
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 269/532 (50%), Gaps = 14/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+ + R + G L+I +SR D G Y+C
Sbjct: 431 AARGGEISIACQPRAAPKATVLWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGKYTCF 490
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 491 AENFMGKANSTGVLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 549
Query: 122 VRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I N D ++ G L I NA G+Y C+ ++ V S + TV+V GP
Sbjct: 550 FPI-NFDKPGGHYRRASVKETVGDLMILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGP 608
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 PGPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE--- 665
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 666 --GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGG 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
G+L ++W P+ RE QN Y + +R++ + +Q+ + + V S Y
Sbjct: 724 APGELIVNWTPMSREYQNGDGFGYLLSFRRQGSSGWQTARVPG-ADAQYFVYSNESIQPY 782
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ +
Sbjct: 783 TPFEVKIRSYNQRGDGPESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPVQ---Q 839
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++ G L+G+ I+YWK + E A + A + LQP+TKY+V V AYN AG GP
Sbjct: 840 DVNGILLGYEIRYWKAGDKEAAADRVRTAGLETVACVTSLQPNTKYHVTVRAYNRAGTGP 899
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PPS + + +++ + W V E + GYK+
Sbjct: 900 ASPSTNATTMKPPPRRPPSNISWT-FSSSSLTIQWDPVVALRNESAVTGYKM 950
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + V W P+
Sbjct: 679 WMDYEFRVLASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMS-- 736
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ +QP T + VK+
Sbjct: 737 REYQNGDGFGYLLSFRRQGSSGWQTARVPGADAQYFVYSNE-------SIQPYTPFEVKI 789
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES + + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 790 RSYNQRGDGPESLTAIVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEPVQQDVNGI-LLGY 848
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++R W+ D A D + G A + L P +YH+ V A++ G G S
Sbjct: 849 EIRYWKAG-DKEAAADRVRTAGLETVACVTSLQPNTKYHVTVRAYNRAGTGPAS 901
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 342 GANLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 400
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ + +W+ G I
Sbjct: 401 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIACQPRAAPKATVLWS-KGTEI 459
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
TP GG L I N S +D G+Y C ++ +GK ++ + V
Sbjct: 460 LVNSSRVTVTP-----GGTLIIRNISRSDEGKYTCFAENFMGKANSTGVLSV 506
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P W+K + GS + L I VS +D G Y C
Sbjct: 251 YALVGQQVTLECFAFGNPVPMIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 307
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
A N G D +GR+IV P + + + + I A NL+ C+A + V W
Sbjct: 308 EAENSKGRDTVQGRIIVQAQPEWLKVISDTEADIGA--NLRWGCAAAGKPRPTVR--WLR 363
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 NGEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 415
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + R ++ ++I+P D+G+Y C A+N
Sbjct: 57 QVTLACRARASPPATYRWKMNGTEMKLEPDSRHQLVGGNLVIINPTKAQDAGVYQCLASN 116
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 117 PVGTVVSREAVLRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 169
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 170 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 216
Query: 169 STKT 172
STK+
Sbjct: 217 STKS 220
>gi|426239383|ref|XP_004013601.1| PREDICTED: contactin-2 [Ovis aries]
Length = 1024
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 262/531 (49%), Gaps = 19/531 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 421 AARGGEVVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 480
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ ++WT +
Sbjct: 481 AENFMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDD 539
Query: 122 VRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + ++ G L I +A G+Y C ++ V S + TV+V GPP
Sbjct: 540 FPIDSDKPGGHYQRASMKETVGDLTILSAQLRHGGKYTCTAQTVVDSASREATVLVRGPP 599
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ TS + W+ G N PI Y + ART + W V + E
Sbjct: 600 GAPGGVVVRDISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPANIE---- 655
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 656 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGA 714
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+++W P+ RE Q + + +R++ T +Q+ + + V S YT
Sbjct: 715 PGELTVTWTPVSREYQRGGGLGSLVSFRRQGSTSWQTARVPG-ADAQYFVYSNDSVRPYT 773
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES V P+VAP V+++G +S+ +NV+W P++ ++
Sbjct: 774 PFEVKIRSYNRRGEGPESLVA-------QPRVAPPKVWAKGVSSSEMNVSWEPVQ---QD 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK A + AL+ GL TKY+V V AYN AG GP
Sbjct: 824 MNGILLGYEIRYWKAGAKAAAAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGTGPA 883
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 884 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLGNESAVTGYKM 933
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/612 (23%), Positives = 235/612 (38%), Gaps = 76/612 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P+P W G + + R ++ G+L S +S +DSG+Y C A N
Sbjct: 332 GSDLHWACAAAGKPRPAVRWXXXGAGVSAQARVEVLA-GDLRFSKLSLEDSGMYQCVAEN 390
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P + I A R ++ +W+
Sbjct: 391 KHGTIYASAELAVPALAPDFRLNPVRRLIPAARGGEVVIPCQPRAAPKAVVLWSK----- 445
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
G L + DG L+ I N S +D G+Y C ++ +GK ++ T+ V
Sbjct: 446 GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAENFMGKANSTGTLSVRD------ 498
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WNSTWFNVSEHVIGKEVDRYTGR 243
+ + +SA I D T +H + T W F + G R + +
Sbjct: 499 -ATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFVWTLDDFPIDSDKPGGHYQRASMK 557
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ +L + K + S S + P AP GG + D
Sbjct: 558 ETVGDLTILSAQLRHGGKYTCTAQTVV---DSASREATVLVRGPPGAP-----GGVVVRD 609
Query: 304 LS-----ISWE-------PLPR---EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
+S +SW P+ + + + P+ +K + E +ET + G
Sbjct: 610 ISDTSVQLSWSRGFDNHSPIAKYTLQARTLPSGKWKQVRTNPANIEGNAETAQVLGLTP- 668
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ +YE +V A N +G G P I + E P VAP G+ G +
Sbjct: 669 ----------WMDYEFRVLASNILGTGEPSGPSSKIQTKEAAPSVAPSGLSGGGGAPGEL 718
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGL 459
VTW P+ RE RG +G + + ++ + P A Y++ +
Sbjct: 719 TVTWTPVS--REYQRGGGLGSLVSFRRQGSTSWQTARVPGADAQYFVYSND-------SV 769
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+P T + VK+ +YN GEGPES L R AP K V KG++ + ++V+W V
Sbjct: 770 RPYTPFEVKIRSYNRRGEGPES---LVAQPRVAPPK----VWAKGVSSSEMNVSWEPVQQ 822
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++GY++R W+ + A + + G A + L +YH+ V A++ G
Sbjct: 823 DMNGI-LLGYEIRYWKAGAKAA-AAERVRTAGLDTSALVTGLHASTKYHVTVRAYNRAGT 880
Query: 580 GRMSSPAITFQM 591
G S A M
Sbjct: 881 GPASPSANATTM 892
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G ++ G R+ GNL+I +P D+G+Y C A+N
Sbjct: 56 KVTLACRARASPPATYRWKMNGTDMKLEPGSRQQLVGGNLVIMNPSKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|344236691|gb|EGV92794.1| Contactin-2 [Cricetulus griseus]
Length = 1008
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 273/532 (51%), Gaps = 14/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 400 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCF 459
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 460 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 518
Query: 122 VRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I N D ++ G L I NA G+Y C+ ++ V S + TV+V GP
Sbjct: 519 FPI-NFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVLVRGP 577
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 578 PGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE--- 634
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 635 --GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGG 692
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
G+L I+W P+ RE QN Y + +R++ + +Q+ + + V S Y
Sbjct: 693 APGELIINWTPMSREYQNGDGFGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDSIHPY 751
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W E +++
Sbjct: 752 TPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSW---ESVQQ 808
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 809 DTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSARVTGLYPNTKYHVTVRAYNRAGTGP 868
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++++ W V P E + GYK+
Sbjct: 869 ASPSADAMTMKPPPRRPPGNISWT-FSSSSLNLKWDPVVPLQNESTVTGYKM 919
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 648 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMS-- 705
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ + P T + VK+
Sbjct: 706 REYQNGDGFGYLLSFRRQGSSVWQTARVPGADAQYFVYSND-------SIHPYTPFEVKI 758
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG + + ++V+W V ++GY
Sbjct: 759 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESVQQD-TNGILLGY 817
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 818 EIRYWKAG-DNEAAADRVRTAGLDTSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAM 876
Query: 590 QM 591
M
Sbjct: 877 TM 878
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 311 GSNLRWACAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 369
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 370 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 429
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 430 GNS-----TRVTVTSDGTLI-IRNISRSDEGKYTCFAENFMGKANS 469
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C K W+K + GS + L I VS +D G Y C
Sbjct: 224 YALVGQQVTLECFAFG----KIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 276
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR++V P + + + NL+ C+A + V W N
Sbjct: 277 EAENSKGRDTVQGRIVVQAQPEWLKVI-SDTEADIGSNLRWACAAAGKPRPMVR--WLRN 333
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 334 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 384
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 30 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKAQDAGVYQCLASN 89
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 90 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 145
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 146 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 193
>gi|327272946|ref|XP_003221245.1| PREDICTED: contactin-1-like [Anolis carolinensis]
Length = 1030
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 284/588 (48%), Gaps = 23/588 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG I C P AAP+PK W K I+ + R +I+ +G+L I V+ D+G Y+C
Sbjct: 437 AARGGQAIIECKPRAAPRPKLTWSKGAYILKNTTRTRIWYDGSLEILNVTAADAGNYTCF 496
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S L+ P+ + P I + +N L+C A + LD+ +IW NG
Sbjct: 497 VENFKGKANSSSTLVTT-APTRIDLAPTNIDVIVGQNATLQCHALHDPSLDLTFIWLLNG 555
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ ++ +I I + G L + A AG Y CV ++ V + ++V GPP
Sbjct: 556 YPVDVDKESDYYERSIMIKNNGELIVKYAQLRHAGRYTCVAQTIVDNATASADLVVRGPP 615
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG++V E+ TS + W+ G N PI++Y I +RT + W ++ +
Sbjct: 616 GPPGGLKVEEIKNTSVVLTWSRGTDNHSPISNYTIQSRTFLSEYWKDMK-----TDPPLV 670
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF+++A N LG GEPS PSP T P APS +GGGGG
Sbjct: 671 EGNVESAKVIDLIPWMEYEFRIMATNILGTGEPSMPSPIIQTEGSPPNVAPSEVGGGGGS 730
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PLPRE N Y + ++ + E++ T+ + +G V + S +
Sbjct: 731 NRELTITWVPLPREYHFGNNFGYVVAFKSFDQKEWKRVTVPQ-PEIGRYVHKDESMPPSS 789
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+VKV+A N+ G GP S I SAED P P+ V + +ST V+W I
Sbjct: 790 RYQVKVRAFNNKGEGPFSLTAIIHSAEDAPSERPRNVHVKVRSSTEAVVSWEHI------ 843
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G+ I+YW E+ A A + L+PDT+YY V A+N AG GP
Sbjct: 844 FNLAVTGYEIRYWSHREKEDAANRVQVSNLNFSARLENLKPDTQYYTDVKAFNTAGFGPA 903
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
+ T + P++ P V ++ + + W +V E + GYKV ++ D
Sbjct: 904 TSPLSFVTEKAPPRQRPRIVSVERYG-SKFLIKWDHVKSQSNESSVKGYKV-LYRPD--- 958
Query: 541 SRANDTIIPVGNTLDADIVDLSPGK-RYHMRVLAFSNGGDGRMSSPAI 587
+ N T+ G I +P K +Y + V S GGDG ++ I
Sbjct: 959 GQFNGTLFKTGKHF---IEVPAPLKGQYVVEVRVHSEGGDGEVAQVKI 1003
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C A P P W KDG + G+L S + +DSG+Y C A N+HGM S
Sbjct: 363 CVAAAKPLPTIRWLKDG---------IPYWKGDLRFSSLKNEDSGMYQCVAENIHGMIYS 413
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ +E P K + A R Q W+ G L
Sbjct: 414 NAELKVIVLAPTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKLTWSK-----GAYILKN 468
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I DG LEI N + ADAG Y C V++ GK ++ +T++ P
Sbjct: 469 TTRTRIWYDGS-LEILNVTAADAGNYTCFVENFKGKANSSSTLVTTAP 515
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 135/628 (21%), Positives = 213/628 (33%), Gaps = 120/628 (19%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG +I+ + +
Sbjct: 263 YALLGQNVTLECFALGNPVPEIRWNKYLEPMPTSAEISMSGAVLRIYN--------IQFE 314
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL----QLRCSAHTEE 109
D G Y C A N G D+ ++ V P + E + R+L C A +
Sbjct: 315 DEGTYECEAENHRGKDKHSAKVYVQAYPEWVEHIN-----DTERDLGSEFHWPCVAAAKP 369
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI- 168
L + W +G+ D L ++ D+G Y+CV ++ G I
Sbjct: 370 LPTIR--WLKDGIPYWKGD---------------LRFSSLKNEDSGMYQCVAENIHGMIY 412
Query: 169 -STKTTVIVEGPP-----------GLPGGVQVVEVHKTSA---TIQWTDGATNGRPITHY 213
+ + VIV P GG ++E +A + W+ GA
Sbjct: 413 SNAELKVIVLAPTFEYYPMKKEVLAARGGQAIIECKPRAAPRPKLTWSKGAY-------- 464
Query: 214 KIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273
I+ T W++ S ++ G +EN FK G+
Sbjct: 465 -ILKNTTRTRIWYDGSLEILNVTAAD-AGNYTCFVEN---------FK---------GKA 504
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW------ 327
+S S T AP+RI I + L + P++ W
Sbjct: 505 NSSSTLVTT-------APTRIDLAPTNIDVIVGQNATLQCHALHDPSLDLTFIWLLNGYP 557
Query: 328 ---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
K++D +S +K N G +V+ + Y Q I D VV
Sbjct: 558 VDVDKESDYYERSIMIK---NNGELIVKYAQLRHAGRYTCVAQTIVDNATASADLVVRGP 614
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI---KYWKEDNPEET 441
+ +T++ +TW+ I I R +YWK+ +
Sbjct: 615 PGPPGGLKVEE------IKNTSVVLTWSRGTDNHSPISNYTIQSRTFLSEYWKDMKTDPP 668
Query: 442 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAV 500
V A ++ L P +Y ++MA N G G P + +T P PS V
Sbjct: 669 LV----EGNVESAKVIDLIPWMEYEFRIMATNILGTGEPSMPSPIIQTEGSPPNVAPSEV 724
Query: 501 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ-DMSRANDTIIPVGNTLDADIV 559
G + + +TW + + GY V DQ + R +G + D
Sbjct: 725 GGGGGSNRELTITWVPLPREYHFGNNFGYVVAFKSFDQKEWKRVTVPQPEIGRYVHKD-E 783
Query: 560 DLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ P RY ++V AF+N G+G S AI
Sbjct: 784 SMPPSSRYQVKVRAFNNKGEGPFSLTAI 811
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 66/168 (39%), Gaps = 19/168 (11%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDG-NI-IGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTA 62
G VT+ C P P + W+ + +I I I GNL I+ P D G Y C A
Sbjct: 69 GRVTMNCRARGIPTPTYKWQHNNWDIDIKMAKEHHIMVGGNLEINNPEKSRDEGKYVCIA 128
Query: 63 TNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
NVHG S+ + L+ + E+ P K+ L H + D++Y W
Sbjct: 129 YNVHGTIRSREATLNFGYLYPFTPEERHPVKVKEGVGAVLLCNPPPHYPD--DLSYRWVL 186
Query: 120 NGVRIGNMDLNELETPN----INIDGGLLEITNASFADAGEYECVVKS 163
N D E T + ++ G L I +D G Y C V S
Sbjct: 187 N-------DFPEFITLDKRRYVSQSNGNLYIAKVEASDKGNYSCFVTS 227
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 75/199 (37%), Gaps = 40/199 (20%)
Query: 4 EGGNVTIFCNPEAA-PKP---KFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + CNP P ++V I RR + + NGNL I+ V D G Y
Sbjct: 162 EGVGAVLLCNPPPHYPDDLSYRWVLNDFPEFITLDKRRYVSQSNGNLYIAKVEASDKGNY 221
Query: 59 SCTATN--------------VHGMDESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLR 102
SC T+ + D SKG L I + Y L +N+ L
Sbjct: 222 SCFVTSNSITKSVFSSFIPLIPQADRSKGYLPDIRVKFKDIYALL--------GQNVTLE 273
Query: 103 CSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINIDGGLLEITNASFADAGEYECVV 161
C A + ++ + N L + T I++ G +L I N F D G YEC
Sbjct: 274 CFALGNPVPEIRW----------NKYLEPMPTSAEISMSGAVLRIYNIQFEDEGTYECEA 323
Query: 162 KSTVGKISTKTTVIVEGPP 180
++ GK V V+ P
Sbjct: 324 ENHRGKDKHSAKVYVQAYP 342
>gi|410920631|ref|XP_003973787.1| PREDICTED: contactin-4-like [Takifugu rubripes]
Length = 1035
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 271/584 (46%), Gaps = 25/584 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ I C P+ +P W+K + + R I NG+L I ++ D+G+Y+C A N
Sbjct: 433 GGDALIECKPKMSPWGVVSWRKGSDPLRESNRISILANGSLRIWNATKSDAGLYTCIARN 492
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 122
G+ S G L V P+ P + + ++ L C + L++ + W N +
Sbjct: 493 QFGVASSTGTLSVKE-PTIITTPPSTLDVTVGESMVLPCQVSHDPSLELKFTWFFNEQLI 551
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
G+ E G + I N AG+Y C V++ V IS +IV GPPG
Sbjct: 552 HFGSHG-GFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIALDLIVRGPPGP 610
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS---EHVIGKEVDR 239
P V V E+ T+A++ W G N PIT Y I ART ++ W V+ E V G ++
Sbjct: 611 PTSVHVEEIIDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVAGHQL-- 668
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
A++ L PW YEF+V+A N +G GEPS PS Q T P P+ + GGGG
Sbjct: 669 -----RATVTE-LSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTYPKVTPANVSGGGG 722
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+WEP+P E QN P Y + +R T + + V + S +
Sbjct: 723 SRSELVITWEPVPEEFQNGPGFGYVVAFRPHGATGWMQAAVPT-AEASRYVFKNESIQPF 781
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
+ + VKV N+ G GP V TI+SAE+ P AP V ++ +++ I V+W +
Sbjct: 782 SPFHVKVGVYNNEGEGPFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWSVS 841
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ R++G ++YW E+ A + + +I G++ T YY+ V AYN AG GP
Sbjct: 842 --KRRVLGFEVRYWSRSEKEDMASVQRTVGNQTSTVIRGVKGSTTYYISVRAYNTAGTGP 899
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T + P +PP+ V + + + + + W V E + GYKV +
Sbjct: 900 PSNTVNVTTKKPPPSQPPAKV-MWNTSDSKIILNWERVKALENESEVTGYKVLYKKNRHS 958
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T NT ++ L + Y +++ F GGDG S
Sbjct: 959 HPNVMET-----NTTSVELA-LPTDEDYIIQIKPFGEGGDGSSS 996
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R NG L IS ++ D+G+Y C A N HG S
Sbjct: 347 CKATGKPKPSYRWMKNGENLEPSEERIQVANGALSISRLTLSDTGMYQCVAGNKHGEAYS 406
Query: 72 KGRLIVLH-GPSYYE-QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ P + + QL + + A + + C V++ R G+ L
Sbjct: 407 NAELRVIAVAPDFSQNQLKSQTLVKAGGDALIECKPKMSPWGVVSW-------RKGSDPL 459
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECV------VKSTVGKISTKTTVIVEGPP 180
E +I + G L I NA+ +DAG Y C+ V S+ G +S K I+ PP
Sbjct: 460 RESNRISI-LANGSLRIWNATKSDAGLYTCIARNQFGVASSTGTLSVKEPTIITTPP 515
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLISPVSRD-DSGIYSCTATNV 65
V C + +P P + WK +G I S G I GNL IS +++D D+G Y C A+N
Sbjct: 54 VVFSCEAQGSPPPSYRWKLNGTEISSKYGSHYILSGGNLRISRLNKDQDAGTYQCLASNS 113
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ Q +++ + + L C H+ +L+ + W N
Sbjct: 114 FGTIVSREASLTFAYLENFKTQRRSSVSVREGQGVVLLCGPPPHSGDLV---FSWIFNEY 170
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
D I+ + G L I +D G Y CVV +TV K V+GPP
Sbjct: 171 PTFVKQDTRRF----ISQETGNLYIAKVEPSDVGNYTCVVTNTVTKTR------VQGPP 219
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ + S +G L I ++D+G Y C
Sbjct: 246 HVAKGSTVKLECFALGNPVPSINWRRVDGVSFSRKVDTRKASGVLEIPYFQQEDAGTYEC 305
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N GM+ KG+L P E+ P + +L C A + +Y W N
Sbjct: 306 VAENSRGMNTVKGKLSFYAPPQLIEK-PRDVQKLIDDSLVWECKATGKP--KPSYRWMKN 362
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
G N++ +E I + G L I+ + +D G Y+CV + G+
Sbjct: 363 G---ENLEPSE---ERIQVANGALSISRLTLSDTGMYQCVAGNKHGE 403
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 106/283 (37%), Gaps = 41/283 (14%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + RR I E GNL I+ V D G Y+
Sbjct: 144 EGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLYIAKVEPSDVGNYT 203
Query: 60 CTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G +VL P Q P + +A ++L C A
Sbjct: 204 CVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEFVHVAKGSTVKLECFALGNP 263
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + N R+ + + + G+LEI DAG YECV +++ G +
Sbjct: 264 VPSI------NWRRVDGVSFSR--KVDTRKASGVLEIPYFQQEDAGTYECVAENSRGMNT 315
Query: 170 TKTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
K + PP L P VQ + ++ W AT G+P Y+ W
Sbjct: 316 VKGKLSFYAPPQLIEKPRDVQKL----IDDSLVWECKAT-GKPKPSYR----------WM 360
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
E++ E SI + + T ++ +AGN+ G
Sbjct: 361 KNGENLEPSEERIQVANGALSISRLTLS-DTGMYQCVAGNKHG 402
>gi|51476685|emb|CAH18318.1| hypothetical protein [Homo sapiens]
Length = 865
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 321 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 380
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 381 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCRASHDPTMDLTFTWTLDD 439
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 440 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 499
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 500 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 555
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 556 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 614
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 615 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 673
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 674 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 730
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 731 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 790
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYKV
Sbjct: 791 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKV 840
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 569 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 626
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 627 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 679
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 680 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 738
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 739 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANAT 797
Query: 590 QM 591
M
Sbjct: 798 TM 799
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 141 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 197
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 198 EAENPKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 254
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 255 GELLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 305
>gi|449481132|ref|XP_004177255.1| PREDICTED: LOW QUALITY PROTEIN: contactin-1 [Taeniopygia guttata]
Length = 1050
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 291/590 (49%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R +I+++G+L I V++ D G Y+C
Sbjct: 431 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCF 490
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 491 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 549
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 550 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSASADLVVRGPP 609
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG++V E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 610 GPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTDPSDIE---- 665
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PSP+ T P APS +GGGGG
Sbjct: 666 -GNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGS 724
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W L RE N Y + ++ + E++ T +G V + S T
Sbjct: 725 NRELTITWMLLSREYHYGNNFGYIVAFKPFGEKEWRRVTXTN-PEIGRYVHKDESMPPST 783
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N+ G GP S I+SA+D P P V + +S+ ++V+W+ +
Sbjct: 784 QYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVS----- 838
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y+V V A+N+AG GP
Sbjct: 839 -DKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPP 897
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S ++ RKAP Q+P ++ + + +TW +V E + GYKV Q
Sbjct: 898 SST-IDVVTRKAPPSQRPRIISSVR--SGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQ 954
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T +T++ V + Y + V A S GGDG ++ I+
Sbjct: 955 HEGKLFST---GKHTIE---VPVPSDGEYVVEVRAHSEGGDGEVAQIKIS 998
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L + ++ DD+G+Y C A N+HG+ +
Sbjct: 357 CVATGKPIPTIRWLKNG---------ASFRKGELRMQSLTFDDAGMYQCIAENMHGIIYA 407
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L ++ P +E P K I A + ++ + + W+ + N
Sbjct: 408 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVN----- 462
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIST 170
I I D G LEI N + D G Y C ++ GK ++
Sbjct: 463 --GSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANS 500
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 72/188 (38%), Gaps = 34/188 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 257 YALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVLKIFN--------IQYE 308
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N G D+ + R+ V P + E + +L C A + + +
Sbjct: 309 DEGLYECEAENYKGKDKHQARVYVQAAPEWVEHI-NDTERDIGSDLYWPCVATGKPIPTI 367
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NG + G L + + +F DAG Y+C+ ++ G I
Sbjct: 368 R--WLKNGA---------------SFRKGELRMQSLTFDDAGMYQCIAENMHGIIYANAE 410
Query: 174 V-IVEGPP 180
+ IV PP
Sbjct: 411 LKIVASPP 418
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+I +P D+G Y C +N
Sbjct: 65 GQVSMNCRARAVPFPTYRWKLNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVCVVSN 124
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 125 IFGTVRSSEATLSF---GYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 181
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 182 EFPVFIALDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 221
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A ++ L P +Y +++A N G G P RT P PS V G + + +
Sbjct: 671 ATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGGGGGSNRELTI 730
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
TW +S + GY V +++ R T +G + D + P +Y ++V
Sbjct: 731 TWMLLSREYHYGNNFGYIVAFKPFGEKEWRRVTXTNPEIGRYVHKD-ESMPPSTQYQVKV 789
Query: 572 LAFSNGGDGRMSSPAITF 589
AF+N GDG S A+ +
Sbjct: 790 KAFNNKGDGPFSLTAVIY 807
>gi|355558857|gb|EHH15637.1| hypothetical protein EGK_01752 [Macaca mulatta]
Length = 1040
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 268/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN GEGPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|354478087|ref|XP_003501247.1| PREDICTED: contactin-2 [Cricetulus griseus]
Length = 1040
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 273/532 (51%), Gaps = 14/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I N D ++ G L I NA G+Y C+ ++ V S + TV+V GP
Sbjct: 551 FPI-NFDKPGGHYRRASVKETIGDLTILNAQLRHGGKYMCMAQTVVDGASKEATVLVRGP 609
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 610 PGPPGGVVVRDIGDTTVQVSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE--- 666
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 --GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGG 724
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
G+L I+W P+ RE QN Y + +R++ + +Q+ + + V S Y
Sbjct: 725 APGELIINWTPMSREYQNGDGFGYLLSFRRQGSSVWQTARVPG-ADAQYFVYSNDSIHPY 783
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W E +++
Sbjct: 784 TPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSW---ESVQQ 840
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 841 DTNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSARVTGLYPNTKYHVTVRAYNRAGTGP 900
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++++ W V P E + GYK+
Sbjct: 901 ASPSADAMTMKPPPRRPPGNISWT-FSSSSLNLKWDPVVPLQNESTVTGYKM 951
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELIINWTPMS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ + P T + VK+
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSVWQTARVPGADAQYFVYSND-------SIHPYTPFEVKI 790
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG + + ++V+W V ++GY
Sbjct: 791 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGSSSSELNVSWESVQQD-TNGILLGY 849
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 850 EIRYWKAG-DNEAAADRVRTAGLDTSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAM 908
Query: 590 QM 591
M
Sbjct: 909 TM 910
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 343 GSNLRWACAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTSDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 308
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR++V P + + + NL+ C+A + V W N
Sbjct: 309 EAENSKGRDTVQGRIVVQAQPEWLKVI-SDTEADIGSNLRWACAAAGKPRPMVR--WLRN 365
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 366 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ MD S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + ++V+ P
Sbjct: 316 RDTVQGRIVVQAQP 329
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKAQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 221
>gi|388452968|ref|NP_001252701.1| contactin-2 precursor [Macaca mulatta]
gi|355782630|gb|EHH64551.1| hypothetical protein EGM_17796 [Macaca fascicularis]
gi|387542506|gb|AFJ71880.1| contactin-2 precursor [Macaca mulatta]
Length = 1040
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN GEGPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGEGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANAT 906
Query: 590 QM 591
M
Sbjct: 907 TM 908
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|397504882|ref|XP_003823009.1| PREDICTED: contactin-2 [Pan paniscus]
Length = 1040
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|193784931|dbj|BAG54084.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 218 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 277
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 278 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 336
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 337 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 396
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 397 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 452
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 453 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 511
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 512 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 570
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 571 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 627
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 628 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 687
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 688 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 737
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 466 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 523
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 524 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 576
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 577 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 635
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 636 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSANAT 694
Query: 590 QM 591
M
Sbjct: 695 TM 696
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K GS + L I VS +D G Y C
Sbjct: 38 YALVGQQVTLECFAFGNPVPRIKWRKAD---GSLSPQWTTAEPTLQIPSVSFEDEGTYEC 94
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 95 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 151
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 152 GELLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 202
>gi|120538513|gb|AAI29987.1| Contactin 2 (axonal) [Homo sapiens]
Length = 1040
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>gi|158260993|dbj|BAF82674.1| unnamed protein product [Homo sapiens]
Length = 1040
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSELSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>gi|440888801|gb|ELR44589.1| Contactin-4, partial [Bos grunniens mutus]
Length = 576
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/591 (30%), Positives = 278/591 (47%), Gaps = 30/591 (5%)
Query: 36 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 95
R I E+G+L I V++ D+G Y+C ATN G S G L+V P+ P + +
Sbjct: 3 RITISEDGSLRIINVTKSDAGSYTCIATNHFGTASSTGNLVV-KDPTKVMVPPSSMDVTV 61
Query: 96 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 154
++ L C + L++ + W+ NG I + D + E G L I N A
Sbjct: 62 GESIVLPCQVTHDHSLNIVFTWSFNGRLIDFDRDGDHFERVGGQDSAGDLMIRNIQLKHA 121
Query: 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
G+Y C+V+++V ++S +IV GPPG P V + E+ T+A + W G N PIT Y
Sbjct: 122 GKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYV 181
Query: 215 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 274
I ART ++ W V + + + +D G+ + L PW YEF+ +A N +G GEPS
Sbjct: 182 IQARTPFSVGWQAV--NTVPELID---GKTFTATVVGLNPWVEYEFRTVAANVIGIGEPS 236
Query: 275 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 334
PS + T P P+ + GGGG +L I+WE +P E QN Y + +R
Sbjct: 237 RPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPYGKMI 296
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
+ L + V R S ++ +EVKV N+ G GP S ++SAE+ P P
Sbjct: 297 WMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEGPFSPTTVVYSAEEEPTKPP 355
Query: 395 QGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
+F+R ++T I V W +P+ E RGR+ G+ +KYW+ D+ EE A + +
Sbjct: 356 ASIFARSLSATDIEVFWASPM----EKNRGRIQGYEVKYWRHDDKEENARKIRTIGNQTS 411
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
I L+ Y++ V AYN+AG GP S T + P +PP + I + + + +
Sbjct: 412 TKITNLKGSALYHLAVKAYNSAGTGPASATVNVTTRKPPPSQPPGNI-IWNSSDSKIILN 470
Query: 514 WRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGNTLDADIVDLSPGKRYHMR 570
W V E + GYKV W S N T + + D D Y +
Sbjct: 471 WDQVKALDNESEVKGYKVLYRWSRQSSTSVIETNKTSVELSLPFDED---------YIIE 521
Query: 571 VLAFSNGGDGRMSS----PAITFQMGEEKEFKSGSPALYSASTTLLLVMSS 617
+ FS+GGDG S P I+ + + SA +T+++ +++
Sbjct: 522 IKPFSDGGDGSSSEQIRIPKISNAYARGAGPSTSNACTLSAISTIMISLTA 572
>gi|4827022|ref|NP_005067.1| contactin-2 precursor [Homo sapiens]
gi|399092|sp|Q02246.1|CNTN2_HUMAN RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|36675|emb|CAA48335.1| TAG-1/axonin-1 precursor [Homo sapiens]
gi|871368|emb|CAA47963.1| transient axonal glycoprotein [Homo sapiens]
gi|119611939|gb|EAW91533.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
gi|119611940|gb|EAW91534.1| contactin 2 (axonal), isoform CRA_a [Homo sapiens]
Length = 1040
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>gi|306921221|dbj|BAJ17690.1| contactin 2 [synthetic construct]
Length = 1040
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GELLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>gi|444868|prf||1908253A TAG-1 protein (axonin 1)
Length = 1040
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I V+ +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVTFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>gi|168272854|dbj|BAG10266.1| contactin-2 precursor [synthetic construct]
Length = 1040
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GELLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|301613550|ref|XP_002936273.1| PREDICTED: contactin-2-like [Xenopus (Silurana) tropicalis]
Length = 990
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 244/481 (50%), Gaps = 12/481 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I CNP AAP P +W K ++ + R + NG L++ +SR D G Y+C
Sbjct: 422 AARGGEVIIQCNPRAAPTPLILWSKGTELLFNSSRVTVTANGTLILRNISRSDEGKYTCF 481
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N+ G S G L V + P I ++ L+C A + +D+ + WT NG
Sbjct: 482 AENIMGKSNSTGVLSVREA-TKITLAPSGSDINQGDSITLQCHASHDPSMDLTFTWTLNG 540
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ I + +++ G L I NA AG+Y C+ ++ V + S ++++ GPP
Sbjct: 541 IPIDFEKEAQNYRRTSMDEAVGDLHIINAQLRHAGKYTCMAQTVVDRTSAMASLLIRGPP 600
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V V +T + W+ G N PI+ Y + R W + E
Sbjct: 601 GPPGGVVVKYVGETMVQLSWSRGFDNHSPISRYVVQVREPLTEIWRSARTDPPTVE---- 656
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E+++ L W+ Y F+++A N LG G+PS+PS T P APS +GGGGG
Sbjct: 657 -GNAESALVVGLNQWTDYLFRIVASNILGDGDPSAPSALIRTREAAPNVAPSEVGGGGGA 715
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W P+ R+ QN + Y I +++KN+ + + + G V R S YT
Sbjct: 716 PNELTINWTPIGRQYQNGDDFGYIIAFKRKNENTWLTVRVPG-GQSQQYVYRNESIAAYT 774
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VK+Q N G GP S T++SAE+ P++ P V + +S+ I V WNP+ +
Sbjct: 775 PFDVKIQGYNKKGEGPFSRDTTVYSAEEEPRMFPSEVKATAISSSDIEVAWNPV----QT 830
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
++G L+G+ I+YWK + E A S A + L+PDT YYV V YN AG GP
Sbjct: 831 LKGVLLGYEIRYWKTSDKEAAADRVRSAGMATTAHVTSLKPDTTYYVTVRVYNQAGTGPS 890
Query: 481 S 481
S
Sbjct: 891 S 891
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 34/268 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T+Y ++ A N +G G P + I + E P VAP V G + + W PI
Sbjct: 670 WTDYLFRIVASNILGDGDPSAPSALIRTREAAPNVAPSEVGGGGGAPNELTINWTPIG-- 727
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
R+ G G+ I + +++ P + Y+ R + T + VK+
Sbjct: 728 RQYQNGDDFGYIIAFKRKNENTWLTVRVPGGQSQQYVYRNE-------SIAAYTPFDVKI 780
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YN GEGP S + + P+ PS V I+ + + V W V + ++GY
Sbjct: 781 QGYNKKGEGPFSRDTTVYSAEEEPRMFPSEVKATAISSSDIEVAWNPVQTL--KGVLLGY 838
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA--- 586
++R W+ D A D + G A + L P Y++ V ++ G G SSPA
Sbjct: 839 EIRYWKTS-DKEAAADRVRSAGMATTAHVTSLKPDTTYYVTVRVYNQAGTGP-SSPATNV 896
Query: 587 ----ITFQMGEEKEFKSGSPALYSASTT 610
I ++M +P LY S T
Sbjct: 897 TTSKILYRMSHHS-----TPILYVTSKT 919
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P+P W +DG + + +I NG + + +S DSG+Y C A N
Sbjct: 333 GSDLLWSCAASGKPRPTIRWLRDGKPLMTQVNIEI-TNGQIKFTSLSLHDSGMYQCVAEN 391
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P K I A R ++ + +W+
Sbjct: 392 KHGTIYTTAELTVQALAPDFRLSPVKRLIPAARGGEVIIQCNPRAAPTPLILWSK----- 446
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
G L + +G L+ + N S +D G+Y C ++ +GK
Sbjct: 447 GTELLFNSSRVTVTANGTLI-LRNISRSDEGKYTCFAENIMGK 488
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G V + C P P W+K + G+ R + + L ++ ++ G Y C
Sbjct: 242 YALYGQAVFLECFAFGNPVPHIRWRK---VDGTLPPRLLVIDPVLHFPSITFEEDGTYEC 298
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G +GR+IV P + + +L C+A + + ++
Sbjct: 299 EAVNSEGSTTHQGRVIVQAQPEWLHVIT-DTEAKIGSDLLWSCAASGKPRPTIRWL---- 353
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
R G + ++ NI I G ++ T+ S D+G Y+CV ++ G I T + V+
Sbjct: 354 --RDGKPLMTQV---NIEITNGQIKFTSLSLHDSGMYQCVAENKHGTIYTTAELTVQA 406
>gi|344287936|ref|XP_003415707.1| PREDICTED: contactin-5 [Loxodonta africana]
Length = 1109
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 269/582 (46%), Gaps = 19/582 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V + C P+ +PKP WKK + R I +G+L I S+ D G Y C
Sbjct: 504 KGQEVIVECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRIQNASKSDEGKYVCQGE 563
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P + + ++ L C A + L+V + WT G
Sbjct: 564 NVFGSAEIIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLEVTFYWTLKGQP 622
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + E+ + L I N AG Y C V++T +S + ++V GPPG
Sbjct: 623 IDFEKEGGHFESIRVQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGP 682
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ +++AT+ W A N P++ Y + AR+ ++ W + + TG
Sbjct: 683 PGIVIVEEITESTATLSWGPAADNHSPVSSYNLQARSPFSLGW-----QTVKTVPEVITG 737
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+
Sbjct: 738 DMESAMAVELNPWVEYEFRVVATNPIGTGDPSTPSRIIRTNEAVPKTAPTNVSGRSGRRH 797
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + R S T +
Sbjct: 798 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF 856
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++
Sbjct: 857 EVKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL- 912
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G + Y K+ EE +R + ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 913 GRPQGFEVGYRKDMEQEEATETVKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGPPSS 972
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
T + P + P + + + V + W V P E ++GYKV + S
Sbjct: 973 EVSASTKKSPPSQAPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSNSE 1031
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T P +V L Y + V A+S GGDG SS
Sbjct: 1032 VIETQKPQA------VVPLPDAGVYIIEVRAYSEGGDGTASS 1067
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+G Y C
Sbjct: 321 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAMLEIPNVQLDDAGTYECR 379
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 380 AENSRGKNSFRGQLQVYTYPHWIEKL-NDTHLDSGSPLRWECKATGKP--RPTYRWLKNG 436
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + L + + G+L I + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 437 VPL-------LPQSRVEMVNGVLMIHKVNQSDAGMYQCLAENKYGAIYASAELKILASAP 489
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V C + P P + W ++G I S R + + ++ +P+ DSG Y C A N
Sbjct: 131 VAFDCEVRSNPVPSYRWFRNGTEIDLESDYRYSLIDGTFIISNPIEAKDSGHYQCLAANT 190
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G S+ ++ +E + + L + S+H+ + + Y W N
Sbjct: 191 FGSILSREAILQFAWLDNFEYQFYFMYFLSE--LLVPPSSHSRN-IQIIYSWVFNEF--- 244
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 245 PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 284
>gi|426333444|ref|XP_004028287.1| PREDICTED: contactin-2 [Gorilla gorilla gorilla]
Length = 1040
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P +APK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRSAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLETSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLETSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L+ + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLQFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYWWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|47211486|emb|CAF95091.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1012
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 267/554 (48%), Gaps = 41/554 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPKP W + ++ + R + +G L + +SR D G Y+C
Sbjct: 399 AARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDGVLWLYNISRADEGKYTCF 458
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N+ L+C A + +D+ + WT NG
Sbjct: 459 AENYLGKANSTGHLSVRDA-TKITLAPSNADINQGENVSLQCHASHDPTMDLTFTWTLNG 517
Query: 122 VRIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V +DL + P ++G G L I NA + AG Y C ++ V S ++V
Sbjct: 518 VL---LDLEDPAGPYRRVEGKENIGDLMIKNAQLSQAGMYTCTAQTVVDSASAAAKLVVR 574
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
GPPG PGG+ V V +TS ++W+ G N PI Y I+ R + W + E
Sbjct: 575 GPPGPPGGLLVKNVAETSVELRWSRGYDNHSPIGKYVIMGRRAPSLQWRQMRTEPANIE- 633
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E++ L+PW YEFKVIA N LG GEPS S T P APS +GGG
Sbjct: 634 ----GNAESARVIGLIPWMDYEFKVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGG 689
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP--- 354
GG +L I+W P+ RE QN Y + +++K+ + ++RIP
Sbjct: 690 GGDHHELIITWTPMAREYQNGDGFGYILAFKRKHAPSW-------------TMLRIPHVD 736
Query: 355 SEFY---------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
S Y Y+ ++V ++A N G GP S++ + SAE+ P V P + + N+
Sbjct: 737 SSRYVYYNESLSPYSPFDVMIRAYNRRGEGPFSQIAVVHSAEEEPTVGPLSINATALNAF 796
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
I V+W+P++ + + G L G+ I+YW+ E A + A + GL+P T+Y
Sbjct: 797 DIQVSWDPVQQLSAD--GLLRGYEIRYWRPQEREAAADRVRTVGRETTARVSGLRPSTRY 854
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+V V+AYN+AG GP S R T + P + P V + P V V W +V+ E
Sbjct: 855 HVSVLAYNSAGTGPSSPRTTVTTRKPPPNRCPGNVSWRTDGP-WVTVRWDHVTALHNESA 913
Query: 526 IIGYKVRVWEVDQD 539
++GYKV V +D
Sbjct: 914 VLGYKVSVCLCVRD 927
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE KV A N +G G P T+ + + P VAP G+ G + + +TW P +
Sbjct: 647 WMDYEFKVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGGGGDHHELIITWTP--MA 704
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ P T + + + L P + + V + AYN G
Sbjct: 705 REYQNGDGFGYILAFKRKHAPSWTMLRIPHVDSSRYVYYNESLSPYSPFDVMIRAYNRRG 764
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGP S+ + + + P P +++ +N + V+W V + + GY++R W
Sbjct: 765 EGPFSQIAVVHSAEEEPTVGPLSINATALNAFDIQVSWDPVQQLSADGLLRGYEIRYWR- 823
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Q+ A D + VG A + L P RYH+ VLA+++ G G SSP T
Sbjct: 824 PQEREAAADRVRTVGRETTARVSGLRPSTRYHVSVLAYNSAGTG-PSSPRTT 874
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
Y G + C P PK W+K DG + G E L++ +S DD G+Y
Sbjct: 217 YGLAGQKAQLECFAYGNPVPKLRWRKVDGLLPAKTGTSA--EGPTLILPDLSFDDEGVYE 274
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + +GR+ V P + Q+ + L C A + + W
Sbjct: 275 CEAYNSEGRETYQGRISVQAQPQWL-QVMSDSEVEISSELIWSCIAAGKPRPSIR--WLR 331
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE 177
NG IG D + ++G L+I+N + D+G Y+CV ++ G I S + V V+
Sbjct: 332 NGQPIGTQD-------RVEVNGAKLKISNLALEDSGMYQCVAENKHGTIYSSAELRVQVQ 384
Query: 178 GP 179
P
Sbjct: 385 AP 386
>gi|149058636|gb|EDM09793.1| contactin 2 [Rattus norvegicus]
Length = 1040
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 271/538 (50%), Gaps = 26/538 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPIDFDKPGGHYRRASAKETIGDLTILNAQLRHGGKYTCMAQTVVDGTSKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRI 353
G+L I+W P+ RE QN Y + +R++ + +Q+ + YGN I
Sbjct: 726 PGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--- 782
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
YT +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P
Sbjct: 783 -----YTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEP 837
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ +++ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN
Sbjct: 838 ---VLQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYN 894
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
AG GP S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 895 RAGTGPASPSADAMTVKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ +QP T + VK+
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGND-------SIQPYTPFEVKI 790
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG + + ++V+W V ++GY
Sbjct: 791 RSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGY 849
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L+P +YH+ V A++ G G S A
Sbjct: 850 EIRYWKAG-DNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYNRAGTGPASPSA 905
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTSDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 308
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 309 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRN 365
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 366 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ MD S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKTQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 221
>gi|327271269|ref|XP_003220410.1| PREDICTED: contactin-2-like [Anolis carolinensis]
Length = 1036
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 270/534 (50%), Gaps = 17/534 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P+AAPK +W K ++ +G R I +G L+I +S+ D G Y+C
Sbjct: 425 AARGGEIIIHCQPKAAPKANIIWTKGTELLNNGSRITITPSGTLIIRNISKSDEGKYTCF 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N+ L+C A + +D+ + W +
Sbjct: 485 AENFMGKANSTGTLSV-RDATKITLAPSSADINVGENITLKCHASHDPTMDLTFTWCLDD 543
Query: 122 VRIGNMDLNELE----TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ I D+++ E + + G L + NA AG Y C ++ V S T++V
Sbjct: 544 LLI---DISKSEGHYKRASTKENIGDLMVLNAQLKHAGRYTCTAQTVVDSASESATLVVR 600
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
GPPG PGG+ V ++ T+ + W+ G N PI Y I RT S W + E
Sbjct: 601 GPPGPPGGLVVTDIKDTTVQLSWSRGFDNHSPIAKYVIQVRTPIFSHWKQARTNPANIE- 659
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E + L+PW YEF+V+A N LG GEPS PS + T P APS + GG
Sbjct: 660 ----GNSETAQVGNLIPWMDYEFRVLASNILGVGEPSMPSAKIRTKEAAPTVAPSGLNGG 715
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG G+L I+W P+ RE QN Y + +RK+ +++ T+ ++ V R S
Sbjct: 716 GGAPGELIINWTPMQREYQNGDGFGYNLTFRKEGTQVWKTATVLGAESLHY-VYRNESIA 774
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YT +EVK++A N G GPES V + SAE+ P+VAP + +T +++TWN +E
Sbjct: 775 PYTPFEVKIKAFNKKGEGPESLVSIVHSAEEEPRVAPSNITVNSVMATEMDITWNSVE-- 832
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
++ G L+G+ I+YWK + EE A + + A + L P+TKY+V V AYN AG
Sbjct: 833 DHDMNGVLLGYEIRYWKHGDKEEAADRVRTAGLVSSAHVTDLHPNTKYHVAVRAYNRAGT 892
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
GP S T + P++PP + K + ++V + W V +E + GYK+
Sbjct: 893 GPASNPTSFTTTKPPPRRPPDNISWK-FSSSSVSIKWDPVVAKADESAVTGYKM 945
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P++
Sbjct: 673 WMDYEFRVLASNILGVGEPSMPSAKIRTKEAAPTVAPSGLNGGGGAPGELIINWTPMQ-- 730
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + KE L + ++ + P T + VK+ A+N G
Sbjct: 731 REYQNGDGFGYNLTFRKEGTQVWKTATVLGAESLHYVYRNESIAPYTPFEVKIKAFNKKG 790
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGPES + + + P+ PS + + + T + +TW V ++GY++R W+
Sbjct: 791 EGPESLVSIVHSAEEEPRVAPSNITVNSVMATEMDITWNSVEDHDMNGVLLGYEIRYWK- 849
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
D A D + G A + DL P +YH+ V A++ G G S+P
Sbjct: 850 HGDKEEAADRVRTAGLVSSAHVTDLHPNTKYHVAVRAYNRAGTGPASNP 898
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+A G V++ C P P+ W+K + G R I L VS +D G Y C
Sbjct: 245 FALAGQLVSLECFAFGNPVPQIRWRK---LDGGQSSRWITTEPLLEFKEVSFEDEGTYEC 301
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
A N+ G D +GR+I+ P + + + K I A +L C+A + + W
Sbjct: 302 EAENIQGKDTYRGRIIIQAQPEWLKVISDKEADIGA--DLHWSCAAAGKPRPTIR--WLR 357
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG- 178
NG + + + I ++GG L I + D+G Y+CV ++ G + V+
Sbjct: 358 NGRPLTSQN-------RIEVNGGDLRIFKLTMDDSGMYQCVGENKHGSTYASAELYVQAF 410
Query: 179 ------------PPGLPGGVQVVEVHKTS---ATIQWTDGA---TNGRPIT 211
P GG ++ + A I WT G NG IT
Sbjct: 411 APDFRLNPVRRLIPAARGGEIIIHCQPKAAPKANIIWTKGTELLNNGSRIT 461
>gi|441613651|ref|XP_004088156.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2 [Nomascus leucogenys]
Length = 1015
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 267/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 405 AARGGEIIIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 464
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 465 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 523
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 524 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 583
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 584 GPPGGVVVRDIGDTTIQLNWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 639
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 640 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 698
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 699 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 757
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 758 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 814
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL +TKY+V V AYN AG GP
Sbjct: 815 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHSNTKYHVTVRAYNRAGTGPA 874
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V P E + GYK+
Sbjct: 875 SPSANATTMKPPPQRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 924
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 653 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 710
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 711 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 763
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 764 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 822
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L +YH+ V A++ G G S A
Sbjct: 823 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHSNTKYHVTVRAYNRAGTGPASPSA 878
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 256 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTVEPTLQIPSVSFEDEGTYEC 312
Query: 61 TATNVHGMDESKGRLIVLHGPSYYE 85
A N G D +GR+IV P + +
Sbjct: 313 EAENSKGRDTVQGRIIVQAQPEWLK 337
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS------AHTEELLDVAYIWT 118
G S+ ++ Q T + + C T +L ++Y W
Sbjct: 116 PVGTVVSREAILRFGXXWLLGQGLQNSTSMLGSHPEWPCXPSTPWFPQTPRILGLSYRWL 175
Query: 119 HNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKIS 169
N E PN I DG G L I + +D G Y C+ S + S
Sbjct: 176 LN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFS 222
Query: 170 TKT 172
TK+
Sbjct: 223 TKS 225
>gi|194210217|ref|XP_001915523.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Equus caballus]
Length = 1041
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/532 (33%), Positives = 270/532 (50%), Gaps = 13/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L++ +SR D G Y+C
Sbjct: 430 AARGGEVVILCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLILRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P + NL L+C A + +D+ ++WT +
Sbjct: 490 AENFMGKANSTGVLSVRDA-TKITLAPSSADVNLGDNLTLQCHASHDPTMDLTFVWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + ++ G L I NA G+Y C+ ++ V +S + TV+V GPP
Sbjct: 549 FPIDFDKPGSHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSVSKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V V T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRNVGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANVE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW+ YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWTDYEFRVLASNILGTGEPSGPSSKIRTQEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+PRE QN Y + +R++ +Q+ + + V S YT
Sbjct: 724 PGELVVNWTPVPREYQNGDGFGYLLSFRRQGSAGWQTARVPG-ADAQYFVYSNDSVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES + SAE+ P+V P V+++G +S+ +NVTW+P++ ++
Sbjct: 783 PFEVKIRSYNRRGAGPESLTALVHSAEEEPRVTPTKVWAKGVSSSEMNVTWDPVQ---QD 839
Query: 421 IRGRLIGHR-IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 VNGILLGYEXIRYWKAGDKEAAADRVRTAGLDTSARVTGLHPNTKYHVTVRAYNRAGTGP 899
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 ASPPANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 950
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 21/243 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T+YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WTDYEFRVLASNILGTGEPSGPSSKIRTQEAAPSVAPSGLSGGGGAPGELVVNWTPVP-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSAGWQTARVPGADAQYFVYSND-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGAGPESLTALVHSAEEEPRVTPTKVWAKGVSSSEMNVTWDPVQQDVNGI-LLGY 847
Query: 530 K-VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ +R W+ D A D + G A + L P +YH+ V A++ G G S PA
Sbjct: 848 EXIRYWKAG-DKEAAADRVRTAGLDTSARVTGLHPNTKYHVTVRAYNRAGTGPASPPANA 906
Query: 589 FQM 591
M
Sbjct: 907 TTM 909
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWSCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + G L + S D+G Y+CV ++ G + + V+
Sbjct: 364 GEPL-------VSQSRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTVYASAELAVQA 414
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 71/179 (39%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPSKAQDAGVYQCLASNP 116
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 117 VGTIVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 171
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 ----------EFPNFIPTDGRHFVSQTTGDLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|432891359|ref|XP_004075560.1| PREDICTED: contactin-5-like [Oryzias latipes]
Length = 1054
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 270/582 (46%), Gaps = 21/582 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C P A+PKP+ WK++ I R + N L I SR D G Y C A N
Sbjct: 454 GKDAFLECKPRASPKPRITWKREDRRIQPNKRIILLRNNTLKIVNSSRADEGNYVCRAEN 513
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L V P K+ + ++ L C A + LDVA+ W N I
Sbjct: 514 QLGSAELTAVLWVKEAMRVVLS-PSKVEVTVGESVVLSCKATHDTSLDVAFQWFFNQKPI 572
Query: 125 -GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D N E L I + AG+Y C +++ + T+ ++V GPPG P
Sbjct: 573 IFQQDGNHFEYIQTQSSTVDLMIRSILLRHAGKYGCRAQTSADSVFTEAELLVRGPPGPP 632
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +AT+ WT G N PI+ Y + AR+ ++ W + + D TG
Sbjct: 633 GVVIVEEITDHTATLSWTRGLDNHSPISTYNLQARSPFSLGW-----QTVKTDPDPVTGD 687
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS + T P APS + GG G+ +
Sbjct: 688 MESAMAVELNPWVEYEFRVVASNAIGTGDPSAPSRRVRTKEAVPSVAPSNVSGGDGRRHE 747
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L ISWEP+ E QN Y + +R N T E + + R + T +E
Sbjct: 748 LVISWEPVSEEFQNGEGFGYIVAFR-ANGTRGWKEKMVTSADSTTYKYRDETFPPLTPFE 806
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S+VV I SAE P+ P V + +S+ I V W G
Sbjct: 807 VKVGVYNNKGDGPFSQVVIIHSAEGEPREPPSDVKAYSISSSEIRVAWK----PPSPGPG 862
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
+ G+ +++WKE EE+ + + ++ GL +++Y + V +NN G+GP
Sbjct: 863 KPKGYEVQFWKETEQEESGKKQRTVKNETFMILTGLDGNSQYLITVKGFNNIGQGPACAA 922
Query: 484 YLERTYRKAPQKPPSAVHIKGINP-TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
RT + P +PP V++ I V ++W V E +IGY V V + + ++
Sbjct: 923 IEARTKKYPPVQPP--VNLAWIQEGNNVSLSWEPVKAKENESDVIGYMVLVKQEGRGYNQ 980
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
TI P + ++ L G Y + V + S GG+G S+
Sbjct: 981 VTRTINP------STVLSLPEGGTYIIEVRSLSEGGEGAASA 1016
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C + P+P + W ++G + S GR +I NG L I V + DSG+Y C A N +G S
Sbjct: 371 CKAISRPRPTYRWLRNGLPLASQGRVEIM-NGELSIHKVQQTDSGMYQCVAENKYGAIYS 429
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ ++ L C + W RI
Sbjct: 430 NAELKILASAPVFFHNPVRVIATLGKDAFLECKPRASPKPRIT--WKREDRRI------- 480
Query: 132 LETPN---INIDGGLLEITNASFADAGEYECVVKSTVG 166
PN I + L+I N+S AD G Y C ++ +G
Sbjct: 481 --QPNKRIILLRNNTLKIVNSSRADEGNYVCRAENQLG 516
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P W+K +GNI RK L I + +DDSG+Y C
Sbjct: 272 AAKGVTVRLECFALGNPVPTITWRKINGNIPKRARLRK--SQAVLEIPNIQQDDSGVYEC 329
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G KG L V P + + + + LQ C A + Y W N
Sbjct: 330 KAENPRGGTAFKGHLQVYTLPQWVRMI-NDTQMDSGEKLQWECKAISRP--RPTYRWLRN 386
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G+ + + + I G L I D+G Y+CV ++ G I
Sbjct: 387 GLPLASQG-------RVEIMNGELSIHKVQQTDSGMYQCVAENKYGAI 427
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENGNLLISPVSR-DDSGIYSCTATNV 65
V + C P P + W +G + S R F +G+L+I+ S D G Y C + N
Sbjct: 79 VMLHCEARGNPPPTYSWYINGTRVDSDTDYRYSFIDGDLIITNASEITDFGKYQCKSENS 138
Query: 66 HGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L+ + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 139 FGSILSRDALLQFAYLGAFSTKSRGAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 195
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ D G L I+ +D G Y C+VK+ V
Sbjct: 196 ---PSFVAEDSRRFISQDTGNLYISKVQPSDVGSYICLVKNPV 235
>gi|74188525|dbj|BAE28018.1| unnamed protein product [Mus musculus]
Length = 1040
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 272/531 (51%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + ++ G L I NA G Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+I+W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 726 PGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYT 784
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P + ++
Sbjct: 785 PFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEP---VLQD 841
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + + A + GL P+TKY+V V AYN AG GP
Sbjct: 842 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPA 901
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 902 SPSADAMTMKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T + P T + VK+ +YN G
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRG 797
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + + P+ P+ V KG + + ++V+W V ++GY++R W+
Sbjct: 798 DGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKA 856
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + L P +YH+ V A++ G G S A M
Sbjct: 857 G-DKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTM 910
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S ++ +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLNLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + +DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTLDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G VT+ C P P+ W+K DG++ G + L I VS +D G Y
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYE 307
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+IV P + + + NL+ C+A + V W
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLR 364
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + + D+G Y+CV ++ G I + V+
Sbjct: 365 NGEPLASQN-------RVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ +D S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTEMNLEPGSRHQLMGGNLVIMSPTKAQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHL-DFSTKS 221
>gi|6981632|ref|NP_037016.1| contactin-2 precursor [Rattus norvegicus]
gi|114736|sp|P22063.1|CNTN2_RAT RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|207149|gb|AAA42201.1| axonal glycoprotein (TAG-1) precursor [Rattus norvegicus]
Length = 1040
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 271/538 (50%), Gaps = 26/538 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTSKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRI 353
G+L I+W P+ RE QN Y + +R++ + +Q+ + YGN I
Sbjct: 726 PGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--- 782
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
YT +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P
Sbjct: 783 -----YTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEP 837
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ +++ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN
Sbjct: 838 ---VLQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYN 894
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
AG GP S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 895 RAGTGPASPSADAMTVKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ +QP T + VK+
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGND-------SIQPYTPFEVKI 790
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG + + ++V+W V ++GY
Sbjct: 791 RSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGY 849
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L+P +YH+ V A++ G G S A
Sbjct: 850 EIRYWKAG-DNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYNRAGTGPASPSA 905
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTSDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 308
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 309 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRN 365
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 366 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ MD S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKTQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 221
>gi|54607084|ref|NP_796103.2| contactin-2 precursor [Mus musculus]
gi|51704323|sp|Q61330.2|CNTN2_MOUSE RecName: Full=Contactin-2; AltName: Full=Axonal glycoprotein TAG-1;
AltName: Full=Axonin-1; AltName: Full=Transient axonal
glycoprotein 1; Short=TAX-1; Flags: Precursor
gi|41946117|gb|AAH66106.1| Contactin 2 [Mus musculus]
gi|148707726|gb|EDL39673.1| mCG12584 [Mus musculus]
Length = 1040
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 272/531 (51%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + ++ G L I NA G Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+I+W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 726 PGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYT 784
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P + ++
Sbjct: 785 PFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEP---VLQD 841
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + + A + GL P+TKY+V V AYN AG GP
Sbjct: 842 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPA 901
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 902 SPSADAMTMKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T + P T + VK+ +YN G
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRG 797
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + + P+ P+ V KG + + ++V+W V ++GY++R W+
Sbjct: 798 DGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKA 856
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + L P +YH+ V A++ G G S A M
Sbjct: 857 G-DKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTM 910
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S ++ +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLNLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + +DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTLDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G VT+ C P P+ W+K DG++ G + L I VS +D G Y
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYE 307
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+IV P + + + NL+ C+A + V W
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLR 364
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + + D+G Y+CV ++ G I + V+
Sbjct: 365 NGEPLASQN-------RVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ +D S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTEMNLEPGSRHQLMGGNLVIMSPTKAQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHL-DFSTKS 221
>gi|74188643|dbj|BAE28065.1| unnamed protein product [Mus musculus]
Length = 887
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 272/531 (51%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 279 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCF 338
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 339 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 397
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + ++ G L I NA G Y C+ ++ V S + TV+V GPP
Sbjct: 398 FPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPP 457
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 458 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 513
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 514 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGA 572
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+I+W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 573 PGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYT 631
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P + ++
Sbjct: 632 PFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEP---VLQD 688
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + + A + GL P+TKY+V V AYN AG GP
Sbjct: 689 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPA 748
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 749 SPSADAMTMKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 798
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 527 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMS-- 584
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T + P T + VK+ +YN G
Sbjct: 585 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRG 644
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + + P+ P+ V KG + + ++V+W V ++GY++R W+
Sbjct: 645 DGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKA 703
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + L P +YH+ V A++ G G S A M
Sbjct: 704 G-DKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTM 757
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S ++ +DSG+Y C A N
Sbjct: 190 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLNLEDSGMYQCVAEN 248
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 249 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 308
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + +DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 309 GNS-----TRVTVTLDGTLI-IRNISRSDEGKYTCFAENFMGKANS 348
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G VT+ C P P+ W+K DG++ G + L I VS +D G Y
Sbjct: 99 YALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYE 154
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+IV P + + + NL+ C+A + V W
Sbjct: 155 CEAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLR 211
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + + D+G Y+CV ++ G I + V+
Sbjct: 212 NGEPLASQN-------RVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 263
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 30/186 (16%)
Query: 12 CNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHG 67
CNP A P + W + N I + GR + + GNL I+ + D G YSC AT+
Sbjct: 4 CNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATS--H 61
Query: 68 MDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
+D S + L PS + PP+ + + L C A +
Sbjct: 62 LDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAFGNPV---- 117
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
RI ++ +P L+I + SF D G YEC +++ G+ + + +
Sbjct: 118 -------PRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKGRDTVQGRI 170
Query: 175 IVEGPP 180
IV+ P
Sbjct: 171 IVQAQP 176
>gi|344276742|ref|XP_003410166.1| PREDICTED: contactin-2 [Loxodonta africana]
Length = 1048
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 266/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 438 AARGGEIIIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 497
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 498 AENSMGKANSTGTLSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 556
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + ++ G L I NA G+Y CV ++ V S + TV+V GPP
Sbjct: 557 FPIDFDKPRGHYQRASVKETVGDLTILNAQLRHGGKYTCVAQTVVDSASKEATVLVRGPP 616
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W +V + E
Sbjct: 617 GPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTLQARTPLAGKWKHVRTNPANIE---- 672
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 673 -GNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 731
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L I+W P+ RE QN Y + +R++ +Q+ + + V S YT
Sbjct: 732 PGELIINWTPMSREYQNGDGFGYLLSFRRQGSASWQTARVPG-ADARHFVYSNESVRPYT 790
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VK+++ N G GPES ++SAE+ P++AP V++ G +S+ +NVTW P++ +
Sbjct: 791 PFQVKIRSYNRRGEGPESLTALVYSAEEEPRLAPAKVWANGISSSEMNVTWEPVQ---RD 847
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 848 MNGVLLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTGLHPNTKYHVTVRAYNRAGTGPA 907
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V E + GYK+
Sbjct: 908 SPSDSAMTMKPPPQRPPGNISWT-FSSSSLSIKWDPVVSLRNESAVTGYKM 957
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 6/227 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P+
Sbjct: 686 WMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIINWTPMS-- 743
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + R++ ++P T + VK+ +YN G
Sbjct: 744 REYQNGDGFGYLLSFRRQGSASWQTARVPGADARHFVYSNESVRPYTPFQVKIRSYNRRG 803
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGPES L + + P+ P+ V GI+ + ++VTW V ++GY++R W+
Sbjct: 804 EGPESLTALVYSAEEEPRLAPAKVWANGISSSEMNVTWEPVQRDMNGV-LLGYEIRYWKA 862
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
D A D + G A + L P +YH+ V A++ G G S
Sbjct: 863 G-DKEAAADRVRTAGLDTSARVTGLHPNTKYHVTVRAYNRAGTGPAS 908
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIV----LHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVA 114
A N G D +GR+IV L + + PP ++ A + +Q + D A
Sbjct: 307 EAENSKGRDTVQGRIIVQEVTLAHRTGSKASPPGMEVLTAGFKRVQAK---------DFA 357
Query: 115 YIWTHNGVRIGN-----MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+W ++ G+ E + + + G L + S D+G Y+CV ++ G I
Sbjct: 358 -LWF---LKWGDPPPPGFKSPECKESRLEVSAGDLRFSKLSLEDSGMYQCVAENKHGTIY 413
Query: 170 TKTTVIVEG 178
+ V+
Sbjct: 414 ASAELAVQA 422
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 43 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 102
G+L S +S +DSG+Y C A N HG + L V + P + I A R ++
Sbjct: 386 GDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRLIPAARGGEII 445
Query: 103 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 162
+W+ G L + DG L+ I N S +D G+Y C +
Sbjct: 446 IPCQPRAAPKAVVLWSK-----GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAE 499
Query: 163 STVGKISTKTTVIV 176
+++GK ++ T+ V
Sbjct: 500 NSMGKANSTGTLSV 513
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 147 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 206
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C AT+ MD S + P++ + N++ R A T L V T
Sbjct: 207 CLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFVP---NIKARFPAETYAL--VGQQVTL 259
Query: 120 NGVRIGNMDLNELETPNIN---IDGGL----------LEITNASFADAGEYECVVKSTVG 166
GN P I +DG L L+I + SF D G YEC +++ G
Sbjct: 260 ECFAFGN------PVPRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKG 313
Query: 167 KISTKTTVIVE 177
+ + + +IV+
Sbjct: 314 RDTVQGRIIVQ 324
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 71/179 (39%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G I G R GNL+I +P D+G+Y C A+N
Sbjct: 57 VTLACGARASPPATYRWKMNGTEIKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNP 116
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 117 VGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 171
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 ----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|431892898|gb|ELK03326.1| Contactin-2 [Pteropus alecto]
Length = 1105
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 269/531 (50%), Gaps = 19/531 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P +APK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 502 AARGGEVIIPCQPRSAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 561
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ +IWT +
Sbjct: 562 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFIWTLDD 620
Query: 122 VRIGNMDL-NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 621 FPIDSEKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 680
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + E
Sbjct: 681 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPSSGKWKQVRTNPANIE---- 736
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW+ YEF+VIA N LG GEPS PS + T + + GGGG
Sbjct: 737 -GNAETAQVLGLTPWTDYEFRVIASNILGTGEPSGPSSKIRT-------KEAGLSGGGGA 788
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 789 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTAQVPG-ADAQYFVYSNDSVRPYT 847
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW+P++ ++
Sbjct: 848 PFEVKIRSYNRRGNGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWDPVQ---QD 904
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + L P+TKY+V V AYN AG GP
Sbjct: 905 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTDLHPNTKYHVTVRAYNRAGPGPA 964
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 965 SPSTSATTMKPPPRRPPDNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 1014
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 359 YTEYEVKVQAINDVG----PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T+YE +V A N +G GP S++ T + AP + V W P+
Sbjct: 750 WTDYEFRVIASNILGTGEPSGPSSKIRTKEAGLSGGGGAPGELI----------VNWTPM 799
Query: 415 ELIRENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYY 466
RE G G+ + + ++ + P A Y++ ++P T +
Sbjct: 800 S--REYQNGDGFGYLLSFRRQGSTSWQTAQVPGADAQYFVYSND-------SVRPYTPFE 850
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
VK+ +YN G GPES L + + P+ P+ V KG++ + ++VTW V +
Sbjct: 851 VKIRSYNRRGNGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWDPVQQDMNGI-L 909
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+GY++R W+ D A D + G A + DL P +YH+ V A++ G G S
Sbjct: 910 LGYEIRYWKAG-DKEAAADRVRTAGLDTSARVTDLHPNTKYHVTVRAYNRAGPGPAS 965
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 17/178 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C K W+K + GS + L I VS +D G Y C
Sbjct: 326 YALVGQQVTLECFAFG----KIKWRK---VDGSLSPQWATAEPTLQIPRVSFEDEGTYEC 378
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + +L+ C+A + V W N
Sbjct: 379 EAENSKGRDSVQGRIIVQAQPEWLKVI-SDMEADIGSSLRWGCAAAGKPRPTVR--WLRN 435
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 436 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 486
>gi|432859227|ref|XP_004069075.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1025
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 179/624 (28%), Positives = 286/624 (45%), Gaps = 30/624 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG + + C P+A+P+ +W + +++ GGR+ + E+G L ++ +++ D G Y+C A N
Sbjct: 429 GGELVLECRPDASPRATILWWRGSDLLRGGGRQTVMEDGTLRVTNITKLDEGRYTCVARN 488
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V+ P+ P + ++L L C ++ L + W NG I
Sbjct: 489 HFGASSSSG-LLVVKEPTKIIAPPLSSDASVGQSLVLPCEVASDSTLSPVFKWFFNGKAI 547
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
+ E G L+ + N AG+Y C+V++ V +S +IV GPPG
Sbjct: 548 DFNRQDHFEMIGGGFAGDLM-VRNVQLKHAGKYVCMVQTEVDTVSAAANLIVRGPPGASE 606
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V +V T+ + W+ N PIT Y + ART ++ W I D G+
Sbjct: 607 TPSVTDVTDTTVKLSWSPAPDNHSPITMYTVQARTPFSIGW-----QTINTVPDSVPGQM 661
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ L+PW YEF+V+A N +G GEPS+PS T P AP + GGGG G+L
Sbjct: 662 MHAFVTDLIPWVDYEFRVVAVNAVGVGEPSTPSEPIRTKPAVPRVAPINVSGGGGTQGEL 721
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+WEP+ E+Q+ + Y + +R + + +T + V R S +++EV
Sbjct: 722 VITWEPVLEEQQSGEDFGYVVAFRPLGTSAW-IQTAVASPDASKYVYRNDSIPPLSQFEV 780
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
V N VG GP S+VV + S+E P AP + R +++ I V W P+ N
Sbjct: 781 SVGVFNSVGEGPFSQVVVVLSSEGEPSEAPSDIRGRAASASEIVVFWEPVPSRSTN---E 837
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+I + + +W+E + A R N AL+ GL+ T Y + V A N+AG GP S
Sbjct: 838 IISYELLFWEEGTQQSDAGRV--RAPNNTALLAGLKASTVYQISVRAQNSAGFGPCSPAV 895
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV---WEVDQDMS 541
T + P + P ++ N + + + W V PS E + GYKV W +
Sbjct: 896 NISTRKPPPSQTPGSIRWSLTN-SKIFLNWEPVKPSANESEVTGYKVEFRQNWNSRTLVL 954
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGS 601
N T I + + G+ + + + A + GGDG S P ++ S
Sbjct: 955 ETNKTSIE---------LQIPTGEDHVIEIKAVTEGGDGTSSGPIRIPKLSGLNSRGCRS 1005
Query: 602 PALYSASTTLLLVMSSTLYIFVAF 625
P L S L++ ++ F F
Sbjct: 1006 PVLLKMS----LMLCGVVFTFFTF 1025
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIY 58
+ +G +V + C P P W++ DGN + + KI N ++L P S +D G+Y
Sbjct: 243 HISKGMSVKLECFALGNPVPSISWRRADGNSLAA----KIKINHSVLEIPYFSPEDGGVY 298
Query: 59 SCTATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
C A N G + +KG LI V H ++ Q +A NLQ C A E Y
Sbjct: 299 ECVAENYRGKNVAKGHLIFQNVEH--LHWGQTLKDAQMAIDANLQWECKAFGEP--RPTY 354
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W NG + D I+ + L I+ + +D+G Y+C+ ++ G I +
Sbjct: 355 RWLKNGQPLTTHD-------RIHTEANTLTISKIALSDSGMYQCIAQNAFGSIHASAELK 407
Query: 176 VEGPP 180
V P
Sbjct: 408 VAASP 412
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 7/174 (4%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
N+ C P+P + W K+G + + R E L IS ++ DSG+Y C A N
Sbjct: 338 ANLQWECKAFGEPRPTYRWLKNGQPLTTHDRIHT-EANTLTISKIALSDSGMYQCIAQNA 396
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G + L V P + + P K R +L + +W
Sbjct: 397 FGSIHASAELKVAASPPDFTRRPVKKATVLQRGGELVLECRPDASPRATILWWRGS---- 452
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
DL ++ G L +TN + D G Y CV ++ G S+ ++V+ P
Sbjct: 453 --DLLRGGGRQTVMEDGTLRVTNITKLDEGRYTCVARNHFGASSSSGLLVVKEP 504
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 14/177 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
V I C + P P + WK +G + S ++ E GNLLIS P G+Y C ATN
Sbjct: 51 VIINCKAKGNPPPHYRWKVNGEDLDTNSDSNYRLLE-GNLLISNPDFISHGGVYQCIATN 109
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-V 122
V G S+ + + + P +++ + + L C+ + ++ Y W N
Sbjct: 110 VFGTIVSRNARVQFAFLQSFSRKPRNPVSVREGQAVVLLCAPPSHH-GEIQYSWVSNREP 168
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV---GKISTKTTVIV 176
R D I+ G L I DAG Y C V++ + + S+ T ++V
Sbjct: 169 RPLQQDARRF----ISQRTGNLYIAKVEAEDAGNYTCAVRNMMTNSSEFSSPTPLVV 221
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 37/244 (15%)
Query: 4 EGGNVTIFCNPEAAP-KPKFVW--KKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYS 59
EG V + C P + + ++ W ++ + RR I + GNL I+ V +D+G Y+
Sbjct: 141 EGQAVVLLCAPPSHHGEIQYSWVSNREPRPLQQDARRFISQRTGNLYIAKVEAEDAGNYT 200
Query: 60 CTATNVHGMDESKG-------RLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C N+ R V+ G P + P + I+ +++L C A
Sbjct: 201 CAVRNMMTNSSEFSSPTPLVVRRDVIMGEYEPKIEVRFPETLHISKGMSVKLECFALGNP 260
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ +++ D N L I I+ +LEI S D G YECV ++ GK
Sbjct: 261 VPSISW---------RRADGNSLAA-KIKINHSVLEIPYFSPEDGGVYECVAENYRGKNV 310
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGA-----------TNGRPI-THYKII 216
K +I + L G + + A +QW A NG+P+ TH +I
Sbjct: 311 AKGHLIFQNVEHLHWGQTLKDAQMAIDANLQWECKAFGEPRPTYRWLKNGQPLTTHDRIH 370
Query: 217 ARTN 220
N
Sbjct: 371 TEAN 374
>gi|432116103|gb|ELK37230.1| Contactin-2 [Myotis davidii]
Length = 962
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 265/531 (49%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 352 AARGGEVMIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 411
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +++ +IW +
Sbjct: 412 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMELTFIWALDD 470
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 471 FPIDPDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 530
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+ V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 531 GPPGGMVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 586
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P+ APS + GGGG
Sbjct: 587 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPFVAPSGLSGGGGA 645
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ +QS + + V S YT
Sbjct: 646 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSAGWQSARVPG-ADAQFFVYSNESIRPYT 704
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW E + ++
Sbjct: 705 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTW---EAVPQD 761
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L+G+ I+YWK + E A + A + L P+TKY+V V AYN AG GP
Sbjct: 762 TNGVLLGYEIRYWKAGDKEAAADRVRTAGLDTTARVTDLHPNTKYHVTVRAYNRAGTGPA 821
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 822 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 871
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 600 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAAPFVAPSGLSGGGGAPGELIVNWTPMS-- 657
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A +++ ++P T + VK+
Sbjct: 658 REYQNGDGFGYLLSFRRQGSAGWQSARVPGADAQFFVYSNE-------SIRPYTPFEVKI 710
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V P ++GY
Sbjct: 711 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEAV-PQDTNGVLLGY 769
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + DL P +YH+ V A++ G G S A
Sbjct: 770 EIRYWKAG-DKEAAADRVRTAGLDTTARVTDLHPNTKYHVTVRAYNRAGTGPASPSA 825
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C K W+K + GS + L I VS +D G Y C
Sbjct: 176 YALLGQQVTLECFAFG----KIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 228
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + +L+ C+A + V W N
Sbjct: 229 EAENSKGRDSVQGRIIVQAQPEWLKVI-SDMEADIGSSLRWGCAAAGKPRPTVR--WLRN 285
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 286 GEPLASQT-------RVEVLAGDLRFSKLSLDDSGMYQCVAENKHGTIYASAELAVQA 336
>gi|345307132|ref|XP_001507473.2| PREDICTED: contactin-2-like [Ornithorhynchus anatinus]
Length = 1377
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 287/589 (48%), Gaps = 34/589 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P +AP+ +W K ++ + R I +G L++ +SR D G Y+C
Sbjct: 677 AARGGEVIIPCQPRSAPRAVVLWSKGTELLTNSSRVTITLDGTLILRNLSRSDEGKYTCF 736
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P + NL L+C A + +D+ + WT +
Sbjct: 737 AENFMGKANSTGTLSVRDA-TKITLAPSSADVNLGENLTLQCHASHDPTMDLTFTWTLDD 795
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA AG+Y C+ ++ V + T+++ GPP
Sbjct: 796 SPIDFDKPDGHYRRASAKEAIGDLTIVNAQLRHAGKYTCMAQTVVDSAAEAATLLIRGPP 855
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y I ART W V + E +
Sbjct: 856 GPPGGVVVRDISDTTVQLSWSRGFDNHSPIAKYTIQARTLPAGQWKPVRTEPVNIEGNAE 915
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R + N L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 916 TAR----VLN-LTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 970
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE------FQSETLKEYGNVGIAVVRIP 354
G+L I+W P+ RE QN Y + +RK+ + FQ+E+L V R
Sbjct: 971 PGELIINWTPMLREYQNGDGFGYLLSFRKQGSVDWRTTRVFQAESLH-------YVYRNE 1023
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ YT +EVK++ N G GPES + SAE+ P+VAP V ++ ++ ++VTW P+
Sbjct: 1024 TIQPYTPFEVKIRGYNRKGEGPESLTAIVHSAEEEPRVAPAKVTAKAALASEVDVTWEPV 1083
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
R + G L+G+ I+YWK+ + E A + A + GL P TKY++ V AYN
Sbjct: 1084 --TRGDTNGVLLGYEIRYWKDGDKEAAADRVRTAGLDTTARVTGLHPSTKYHITVRAYNR 1141
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
AG GP S T + P++PP + + +++ + W V P +E PI GYK+
Sbjct: 1142 AGTGPASPSANVTTMKPPPRRPPGNISWM-FSTSSITIKWDPVVPLPDESPITGYKM--- 1197
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLS-PGKRYH--MRVLAFSNGGDG 580
+ R + P + + + ++++ P H +++ A GGDG
Sbjct: 1198 -----LYRQDSHSAPTLHVTNKNWIEIAVPEGSSHALVQIRATGPGGDG 1241
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P ++
Sbjct: 925 WMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIINWTP--ML 982
Query: 418 RENIRGRLIGHRIKYWKEDNP--------EETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + K+ + + +++Y+ R +QP T + VK+
Sbjct: 983 REYQNGDGFGYLLSFRKQGSVDWRTTRVFQAESLHYVYRNET-------IQPYTPFEVKI 1035
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YN GEGPES + + + P+ P+ V K + V VTW V+ ++GY
Sbjct: 1036 RGYNRKGEGPESLTAIVHSAEEEPRVAPAKVTAKAALASEVDVTWEPVTRGDTNGVLLGY 1095
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 1096 EIRYWK-DGDKEAAADRVRTAGLDTTARVTGLHPSTKYHITVRAYNRAGTGPASPSA 1151
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 21/278 (7%)
Query: 210 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
+ ++ +W +T V E Y R E + P++ +E K+ N G
Sbjct: 994 LLSFRKQGSVDWRTT------RVFQAESLHYVYRNE-----TIQPYTPFEVKIRGYNRKG 1042
Query: 270 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 329
G P S + ++ ++P AP+++ ++ ++WEP+ R N + Y+I + K
Sbjct: 1043 EG-PESLTAIVHSAEEEPRVAPAKVTAKAALASEVDVTWEPVTRGDTNGVLLGYEIRYWK 1101
Query: 330 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM 389
D E ++ ++ G A R+ T+Y + V+A N G GP S + + +
Sbjct: 1102 DGDKEAAADRVRTAGLDTTA--RVTGLHPSTKYHITVRAYNRAGTGPASPSANVTTMKPP 1159
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P+ P G S F++++I + W+P+ + + + G+++ Y ++ + T L T
Sbjct: 1160 PR-RPPGNISWMFSTSSITIKWDPVVPLPDE--SPITGYKMLYRQDSHSAPT----LHVT 1212
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
+NW I + + V++ A G+G +E ++ R
Sbjct: 1213 NKNWIEIAVPEGSSHALVQIRATGPGGDGVPAEVHILR 1250
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W++ + G+ + L I+ V +D G Y C
Sbjct: 497 YALAGQQVTLECFAFGNPVPRIKWRR---VDGTLSPQWAEGEPTLQIANVGFEDEGTYEC 553
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + +L+ C+A + + W N
Sbjct: 554 EAENTKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSDLRWTCAAAGKPRPTMR--WLRN 610
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + GG L+ + + D+G Y+CV ++ G I + V+
Sbjct: 611 GDPLASQ-------ARLEVSGGELKFSKLALQDSGMYQCVAENKHGAIYASAELAVQA 661
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + R GNL+I+ PV +D+G Y C A+N
Sbjct: 295 KVTLACRARASPPATYRWKMNGTEMKLEPNSRYQLVGGNLVITNPVKAEDAGAYQCLASN 354
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH---TEELLDVAYIWT 118
G E+ R L S E+ P +IT L AH +E +
Sbjct: 355 TLGTVVSREAFLRFGFLQEFSKEERDPVRITEGWGVMLPCNPPAHYPGEKETFPILSFPF 414
Query: 119 HNGVRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKS 163
H+ + + + G L + TNAS D G Y C+ S
Sbjct: 415 HSALXXXCGGFADGRHFVSQMTGNLYIARTNAS--DLGNYSCLATS 458
>gi|410986311|ref|XP_003999454.1| PREDICTED: contactin-2 [Felis catus]
Length = 1045
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 266/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 435 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 494
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P + +L L+C A + +D+ +IWT +
Sbjct: 495 AENFMGKANSTGILSVRDA-TKITLAPSSADVNLGDSLTLQCHASHDPTMDLTFIWTLDD 553
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 554 FPIDVDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 613
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V + T+ + W+ G N PI Y + ART W V + E
Sbjct: 614 GPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 669
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 670 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 728
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 729 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTSWQTARVPG-ADARHFVYSNDSVQPYT 787
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES + SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 788 PFEVKIRSYNRRGDGPESLTTLVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 844
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + L P+TKY+V V AYN AG GP
Sbjct: 845 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTDLHPNTKYHVTVRAYNRAGTGPA 904
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V P E + GYK+
Sbjct: 905 SPSANATTMKPPPQRPPGNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 954
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 683 WMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 740
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-VGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + R++ +QP T + VK+ +YN G
Sbjct: 741 REYQNGDGFGYLLSFRRQGSTSWQTARVPGADARHFVYSNDSVQPYTPFEVKIRSYNRRG 800
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES L + + P+ P+ V KG++ + ++VTW V ++GY++R W+
Sbjct: 801 DGPESLTTLVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGYEIRYWKA 859
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + DL P +YH+ V A++ G G S A M
Sbjct: 860 G-DKEAAADRVRTAGLDTSARVTDLHPNTKYHVTVRAYNRAGTGPASPSANATTM 913
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 346 GSNLRWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 404
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P K I A R ++ +W+
Sbjct: 405 KHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIVIPCQPRAAPKAVVLWSK----- 459
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G L + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 460 GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAENFMGKANS 504
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I V+ +D G Y C
Sbjct: 255 YALVGQQVTLECFAFGNPVPQIKWRK---VDGSLSPQWATAEPTLQIPSVAFEDEGTYEC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + NL+ C+A + V W N
Sbjct: 312 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDMEADIGSNLRWGCAAAGKPRPTVR--WLRN 368
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 369 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 419
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 71/179 (39%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 62 VTLACRARASPPATYRWKMNGTEMKLVPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNP 121
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 122 VGTIVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 176
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 177 ----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 224
>gi|358339694|dbj|GAA42413.2| contactin [Clonorchis sinensis]
Length = 958
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 198/679 (29%), Positives = 291/679 (42%), Gaps = 98/679 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G ++T+ C A P+P+ W ++G + + + + V DS +++C
Sbjct: 234 ADIGTDITLTCEAAAIPEPEHAWYRNGIAVSDLISQGKLDPARYSLISVQLSDSSMFTCL 293
Query: 62 ATNVHGMDESKGRLIV---------------------------------------LH--- 79
A N G + S G L V LH
Sbjct: 294 AWNNLGSEASSGELRVISLAPTFARHPVMPNEGMVGGSVVMECRPEGAPSMKTEWLHNAA 353
Query: 80 -------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + + P + + + L C A + LD+ Y W GV+I
Sbjct: 354 VLSPSTSIMDPETGSATLQLSPMNRVVYENSTVLLPCRASSSPYLDINYAWFFEGVQI-K 412
Query: 127 MDLNELETPNINIDG---------GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
D +L+ ++ G L ITN F ++G Y CV ++ + IST + V
Sbjct: 413 FDRLDLDARRYDVSQLLRPYGRYFGTLRITNIQFENSGNYSCVAETPLSSISTGGLIRVA 472
Query: 178 GPPGLPGGVQV---VEVHKTSATIQWTDGATNGRPITHYKIIARTN------WNSTWFNV 228
GPPG GG+ V + H+ + T WT G T+ PIT + I A W N+
Sbjct: 473 GPPGPCGGLMVDPQIGTHRVNVT--WTVGNTHLSPITAFTIEANAKLDPPEKWTVVVSNL 530
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
S + E GR+ A +EN L Y +V A N LG G PS PS + T A P
Sbjct: 531 S--ITATEELLPLGRRMAFVEN-LASNMAYRLRVRAINALGIGAPSPPSLWFTTLATAPT 587
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEY 343
+ P I GGGGK G L W PL N P+ Y+ R K + E+ L E
Sbjct: 588 KMPQNITGGGGKHGTLVFQWVPLSPVDYNGPDFRYRAHIRAKGNNEYGIYELWNTKPLEG 647
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
G + + YY YE++++A+N +G GP ++ VTI SA +P AP GV + N
Sbjct: 648 GKFLQYTLTLGENLYYKPYEIRMEAVNKMGAGPITDPVTIMSAARVPTNAPGGVTAGALN 707
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWK-----EDNPEETAVYYLSRTTR-----NW 453
S+AI V W + +G + G+RI YW + A Y L +
Sbjct: 708 SSAITVWWT--RPLPSEGQGPVGGYRILYWPRVSDCRSERSDIARYQLGQRQTVHGDVTK 765
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHV 512
+I+GL DT Y + V +N AG+G ES + T++ +PQ P+ V + + P T+ V
Sbjct: 766 GVIIGLDADTYYCIAVQLFNTAGDGLESSFTEQTTFKISPQDYPTMVVLNATDMPNTIRV 825
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W V +EE I GY +R W V + T + VG + L KRY++RV
Sbjct: 826 SWVGVQAKPDEESIEGYCIRYWPVGSQF-KQTFTDVDVGLNTFGYVRGLETNKRYYLRVY 884
Query: 573 AFSNGGDGRMSSPAITFQM 591
A+S GG G+MSSP FQ+
Sbjct: 885 AYSRGGVGKMSSPVNQFQI 903
>gi|432859229|ref|XP_004069076.1| PREDICTED: contactin-4-like [Oryzias latipes]
Length = 1011
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 287/639 (44%), Gaps = 50/639 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ + C P+ +P W+K + R I +NG+L I V++ D+G+Y+C A N
Sbjct: 393 GGDMLVECRPKMSPWGVISWRKGSEPLQQSNRIVILDNGSLRIWNVTKSDAGLYTCVARN 452
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 122
GM S G + V Q P + ++ L C + L++ + W N +
Sbjct: 453 QFGMASSTGSVTVKEASVITTQ-PSTLDATVGESVVLPCQVSHDPSLELKFTWFFNEQLI 511
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
G+ D E G + I N AG+Y C V++ V IS +IV GPP
Sbjct: 512 HFGSHD-GFFEKVGGQHSAGDIMIRNIQLKHAGKYTCAVQTKVDSISVALDLIVRGPPAP 570
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRY 240
P +QV E+ T+A++ W G N PIT Y I ART ++ W V+ V+G
Sbjct: 571 PTHIQVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVG------ 624
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
GR+ ++ L PW YEF+V+A N +G GEPS PS Q T + P P+ + GGGG
Sbjct: 625 -GRQLTAVVIDLNPWVEYEFRVLASNRIGTGEPSKPSKQARTKSTSPKVTPANVSGGGGS 683
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L I+WEP+P E QN P Y + +R T + + V + S ++
Sbjct: 684 RSELVITWEPVPEELQNGPGFGYVVAFRPHGATGWMQAAVPS-PEASRYVFKNESIQPFS 742
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMP------------------QVAPQGVFSRGF 402
+ VKV N+ G GP V+TI+SAE+ P V+ GV G
Sbjct: 743 PFHVKVGVYNNEGEGPFGPVITIYSAEEGPCGLISCTVWATVPPTSSSPVSVSGVRLDGR 802
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
++ + LI R L+ +++YW + E+TA + + ++I GL+
Sbjct: 803 EPFKVSAAF----LILSPRRFALLLFQLRYWSKSEREDTASVQRTVGNQTSSIIRGLRGS 858
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T YY+ V AYN AG GP S T + P +PP V N + + V W V
Sbjct: 859 TSYYISVRAYNTAGTGPPSGTVNVTTKKPPPSQPPDKVMWNTSN-SKIIVNWEQVKALEN 917
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
E + GYKV + +T NT ++ L + Y +++ F GGDG
Sbjct: 918 ESEVTGYKVLYKKNRHSRPSVMET-----NTTSVELA-LPTDEDYIIQIKPFGEGGDGS- 970
Query: 583 SSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
SS IT +G+ A+ SAS L ST+ +
Sbjct: 971 SSRQITIPK------TAGTTAVGSASKVSTLSALSTIAL 1003
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + S R NG L IS ++ D+G+Y C A N HG S
Sbjct: 307 CKATGKPKPSYRWMKNGENLESTEERIQVANGVLSISRLTLSDTGMYQCVAGNKHGEVYS 366
Query: 72 KGRL-IVLHGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + + QL + + ++ + C W R G+ L
Sbjct: 367 NAELRVIAAAPDFSHNQLRSQTMVKVGGDMLVECRPKMSP-------WGVISWRKGSEPL 419
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ I +D G L I N + +DAG Y CV ++ G S+ +V V+
Sbjct: 420 QQSNRIVI-LDNGSLRIWNVTKSDAGLYTCVARNQFGMASSTGSVTVK 466
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI---FENGNLLISPVSRDDSGI 57
+ +G V + C P P W+++ G+ RK+ NG L I +DD G
Sbjct: 206 HVAKGSTVKLECFALGNPAPSITWRRED---GAPFPRKVDTRKTNGVLEIPYFQQDDVGT 262
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A N GM++ KG+L + P + + P + +L C A + +Y W
Sbjct: 263 YECVAENSRGMNKVKGKL-SFYAPPHLIEKPQDVQKLIDDSLVWECKATGKP--KPSYRW 319
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG N++ E I + G+L I+ + +D G Y+CV + G++
Sbjct: 320 MKNG---ENLESTE---ERIQVANGVLSISRLTLSDTGMYQCVAGNKHGEV 364
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 102/280 (36%), Gaps = 35/280 (12%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG + + C P +++ + + RR I E GNL I+ V D G Y+
Sbjct: 104 EGQGMVLLCGPPPHSGDLVFSWIFNESTTFVQQETRRFISQETGNLYIAKVEPSDVGNYT 163
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G L + P Q P + +A ++L C A
Sbjct: 164 CVVTNTVTKTRVQGPSTPLVLRSDGVMGEYEPKIEVQFPEIVHVAKGSTVKLECFALGNP 223
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ W G +++T N G+LEI D G YECV +++ G
Sbjct: 224 APSIT--WRRED---GAPFPRKVDTRKTN---GVLEIPYFQQDDVGTYECVAENSRGMNK 275
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
K + PP L Q V+ ++ W AT G+P Y+ W
Sbjct: 276 VKGKLSFYAPPHLIEKPQDVQ-KLIDDSLVWECKAT-GKPKPSYR----------WMKNG 323
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
E++ E SI + + T ++ +AGN+ G
Sbjct: 324 ENLESTEERIQVANGVLSISRLTLS-DTGMYQCVAGNKHG 362
>gi|358418126|ref|XP_605070.5| PREDICTED: contactin-3, partial [Bos taurus]
Length = 912
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 242/494 (48%), Gaps = 12/494 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK I+ R +G L I V++ D+GIY+C A N
Sbjct: 424 GSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LL + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFRKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y + ART ++ W + + + +D G+
Sbjct: 602 ESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTAT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + + R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYIFRNESILPFSLYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P AP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW E+++ A + GL+ + YY V A+N+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSAT 893
Query: 484 YLERTYRKAPQKPP 497
+ T +K P++ P
Sbjct: 894 -VNATTKKTPRQAP 906
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGEALVLEERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L V+ + + P K + + + NL + A L W + G +
Sbjct: 398 SAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSS----W-----KKGEV 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E E + DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 449 IVQENERTSFLNDGG-LKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEP 499
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 98/241 (40%), Gaps = 31/241 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + + E +P+V P V G + + + +TW+P+
Sbjct: 668 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEE 727
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY----------- 466
+N G G+ V + NW V PDT Y
Sbjct: 728 LQN--GEGFGY-------------VVAFRPLGVTNWIQTVVTSPDTPRYIFRNESILPFS 772
Query: 467 ---VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
VKV YNN GEGP S + + P PS V ++ + + V+W +
Sbjct: 773 LYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSN 832
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++GY+VR W + ++ + GN A + L Y+ V AF++ G G S
Sbjct: 833 GHLLGYEVRYWNNGGEEDSSSKLKV-AGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFS 891
Query: 584 S 584
+
Sbjct: 892 A 892
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F +G L I ++DSG Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKF-SGVLEIPNFQQEDSGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + +A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVELAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L E I I+ G L I+N + D+G ++C+ ++ G + S + V+
Sbjct: 355 G---EALVLEE----RIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I R K+ ++I+P D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVINPNRNWDTGNYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|47228831|emb|CAG07563.1| unnamed protein product [Tetraodon nigroviridis]
Length = 598
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 267/554 (48%), Gaps = 36/554 (6%)
Query: 40 FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL 99
+NG+L IS V++ D G+Y+C A N G+ S G L+V P+ + + ++
Sbjct: 1 MDNGSLRISNVTKMDDGVYTCVARNQFGVASSAGSLLVKE-PTAITSPAGHLDVTVGESI 59
Query: 100 QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
L C + L++ + W N I + G + I N AG+Y C
Sbjct: 60 VLPCQVSHDPTLELKFTWFFNEQLIHFGNHWAFFEKVGGRSAGDIMIRNIQPKHAGKYTC 119
Query: 160 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 219
V++ V +S T V+V GPPG PG +V EV +T+A++ W+ G N PI Y I ART
Sbjct: 120 AVQTKVDSVSIATDVVVRGPPGPPGDCRVTEVTETTASVSWSPGTDNYSPILSYAIQART 179
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPSP 278
+ W V+ + G K+ S + L PW YEF+V+A N +G GEPS PS
Sbjct: 180 PFFLGWQAVTT------IPELLGGKQLSATVIDLSPWVEYEFRVLATNSIGTGEPSRPSK 233
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
+ T P P+R+ GGGG +L I+WEP+P E Q+ Y + +R
Sbjct: 234 KARTKETLPRVTPARVNGGGGGRSELVITWEPVPEELQSGLGFGYVVAFRP--------- 284
Query: 339 TLKEYGNVGIAVVRIPSEFY---------YTEYEVKVQAINDVGPGPESEVVTIFSAEDM 389
L G + AV + Y ++ Y+VKV N+ G GP S V TI+SAE+
Sbjct: 285 -LGAQGWMQAAVTSPEASRYVFKNESIPPFSPYQVKVGVYNNRGEGPFSPVTTIYSAEEE 343
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P AP + +R +++ + VTW P L N R R++G+ ++YW E +TA +
Sbjct: 344 PSRAPGRLRARSVSASEVEVTWKP--LAWSNSRRRILGYELQYWSERQKPDTASVIRTVG 401
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
+ LI L+ YYV + AYN+AG GP+S T + P + P + N +
Sbjct: 402 NKTSILIRDLEGRCTYYVSLRAYNSAGVGPQSTTVNVTTKKPPPSQAPGKIMWNTSN-SK 460
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
V + W V E + GYKV ++ D+D + +++ +T + + L + Y +
Sbjct: 461 VILRWDQVHALENESEVTGYKV-MYSQDKD---SRPSVVETNST--SLELSLPVNQDYVI 514
Query: 570 RVLAFSNGGDGRMS 583
++ FS GG+GR S
Sbjct: 515 QIKPFSEGGEGRSS 528
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE-EPIIGYKVRVWEVDQDMSRANDTIIP 549
+ P PP + + TT V+W SP + PI+ Y ++ + T IP
Sbjct: 137 RGPPGPPGDCRVTEVTETTASVSW---SPGTDNYSPILSYAIQA-RTPFFLGWQAVTTIP 192
Query: 550 V---GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
G L A ++DLSP Y RVLA ++ G G S P+
Sbjct: 193 ELLGGKQLSATVIDLSPWVEYEFRVLATNSIGTGEPSRPS 232
>gi|403294842|ref|XP_003938372.1| PREDICTED: contactin-2 [Saimiri boliviensis boliviensis]
Length = 1040
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 267/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S Y
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYM 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++ +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YW+ + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 949
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYMPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V K ++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKAVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWRAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENTKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|410925449|ref|XP_003976193.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Takifugu rubripes]
Length = 1041
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 194/615 (31%), Positives = 290/615 (47%), Gaps = 40/615 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPKP W + ++ + R + +G L I +SR D G Y+C
Sbjct: 430 AARGGQVKIECRPRAAPKPSLFWSRGTELLTNSSRVTVAPDGVLSILNISRADEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I N+ L+C A + +D+++ W NG
Sbjct: 490 AENYLGKANSTGHLSV-RDATKITLAPSNADINQGENVSLQCHAAHDPTMDLSFSWNLNG 548
Query: 122 VRIGNMDLNELETPNINIDG----GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V +DL + P I+G G L I NA + AG Y C ++ V S ++V
Sbjct: 549 VM---LDLEDSAGPYHRIEGKENIGDLIILNAQLSQAGVYTCTAQTVVDSASAVAKLVVR 605
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
GPPG PGG+ V V +TS ++W+ G N PI Y I R +S W + E
Sbjct: 606 GPPGPPGGLLVKNVAETSVELRWSRGYDNHSPIGKYVIRGRWALSSQWRQMR-----TEP 660
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E++ L+PW YEF+VIA N LG GEPS S T P APS +GGG
Sbjct: 661 SNIEGNAESARVIGLMPWMDYEFQVIASNILGSGEPSMASHTVRTQQAAPTVAPSGLGGG 720
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--VVRIPS 355
GG +L I+W P+ RE QN Y + +++ TE + T + V + V S
Sbjct: 721 GGDRHELIITWTPMAREYQNGDGFGYILAFKR---TEAPTWTTLKIPQVDSSRYVYYNDS 777
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y+ + VK++A N G GP S++ + SAE+ P + P G+ + ++ I V+W+PI
Sbjct: 778 LSPYSPFVVKIRAYNCRGEGPFSQIAVVHSAEEEPTLGPLGINATALSAFEIQVSWDPIH 837
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+ ++ R G+ I+YW++ E A + A + GL+P T+Y+V V+AYN+A
Sbjct: 838 QLSTDVLLR--GYEIRYWRQHEREAAADRVRTLGQETSARVSGLRPSTRYHVAVLAYNSA 895
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP S R T + P + P + + + V V W +V E ++GYKV
Sbjct: 896 GTGPSSPRTTVTTRKPPPNRRPGNISWR-TDDAWVTVRWDHVMALHNESAVLGYKVLYKH 954
Query: 536 VDQ------DMSRAN-DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Q D SR+ ++P N+ + + ++ GGDG ++
Sbjct: 955 EGQSTLKVLDKSRSTVKLLLPKDNSYVV------------LEIRSWGEGGDGPAHEIIVS 1002
Query: 589 FQMGEEKEFKSGSPA 603
G ++GSP+
Sbjct: 1003 RDSGTGMMVQNGSPS 1017
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 15/182 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
Y G + C P PK W+K DG + G E L + +S DD GIY
Sbjct: 248 YRLAGQTAQLECFAYGNPVPKLRWRKVDGLLPAKSGSS--VEGPTLTLPDLSFDDEGIYE 305
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+ V P + Q+ + L C A + V W
Sbjct: 306 CEAYNSQGSDAYQGRISVQAQPQWL-QVMSDSEVEISSELLWSCIAAGKPKPSVR--WLR 362
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE 177
NG I D + ++G L+I+N + D+G Y+CV ++ G I S + V V+
Sbjct: 363 NGQSISTQD-------RVEVNGARLKISNLALEDSGMYQCVAENKHGTIYSSAELRVQVQ 415
Query: 178 GP 179
P
Sbjct: 416 AP 417
>gi|395838972|ref|XP_003792378.1| PREDICTED: contactin-2 [Otolemur garnettii]
Length = 1005
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/514 (34%), Positives = 266/514 (51%), Gaps = 16/514 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C+P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEVIIPCHPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYQRANVKETVGDLSILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDISDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMAREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESIRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDISARVTGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPT-TVHVT 513
S T + P++ S ++ ++PT T+H+T
Sbjct: 900 SPSANATTMK--PRE--SMLYQNDLHPTPTLHLT 929
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P +
Sbjct: 678 WMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTP--MA 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SIRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G + A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDISARVTGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 341 GSNLHWGCAAAGKPRPTVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 399
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P + I A R ++ H +W+
Sbjct: 400 KHGTIYASAELAVQALAPDFRLSPVRRLIPAARGGEVIIPCHPRAAPKAVVLWSK----- 454
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G L + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 455 GTEILVNSSRVTVTPDGTLI-IRNISRSDEGKYTCFAENFMGKANS 499
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I +S +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPNISFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRVIVQAQPEWLKVI-SDTDADIGSNLHWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP- 179
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALA 416
Query: 180 ------------PGLPGGVQVVEVHKTS---ATIQWTDG 203
P GG ++ H + A + W+ G
Sbjct: 417 PDFRLSPVRRLIPAARGGEVIIPCHPRAAPKAVVLWSKG 455
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|410899605|ref|XP_003963287.1| PREDICTED: contactin-3-like [Takifugu rubripes]
Length = 1067
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 279/589 (47%), Gaps = 29/589 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A P +WKK I R + +G L ++ VS+ D+G Y+C
Sbjct: 424 AKAGTTVTLECKPQAYPVASILWKKGNLPIHINDRVTLSPDGTLRLANVSKSDAGGYTCF 483
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N GM + GRL+V P+ Q P + I ++ L C ++ +LDV++ W NG
Sbjct: 484 ARNRFGMSSTTGRLLVTD-PTRITQGPVDMEIIVGESIVLPCQVASDPVLDVSFSWAFNG 542
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I D E G L+ I N AG+Y CVV + V +S +IV+GPP
Sbjct: 543 QLIAKGD-GHFELVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVESLSAVAILIVKGPPS 600
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V V EV ++A + W+ G NG PI +Y I RT + W V + + + +D
Sbjct: 601 PPDSVTVEEVTDSTAQLAWSRGRDNGSPIANYFIQTRTPFTVGWQRV--NTVPEIID--- 655
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G + L W YEF+V+A N +G GEPS S + T P AP +GGGGG
Sbjct: 656 GNTLTATVVDLNAWVEYEFRVLARNSVGVGEPSPVSVRTRTEDAVPDAAPGDVGGGGGSR 715
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN + Y I +R + + G V R S ++
Sbjct: 716 SELVITWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPG-ASRYVYRNDSIAPFSP 774
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+ VKV N G GP S VVTI+SAE P P GV++R +++ I V W + E
Sbjct: 775 FHVKVGTYNSKGQGPFSPVVTIYSAEIEPSGMPAGVWARSVSASEIEVNWQALSYSPE-- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
R++G+ + YW++D ET + + GL +T++++ V A+N AG GP
Sbjct: 833 --RVLGYEVVYWEDDTKPETMGKVRVPWNQTVVTVSGLAANTQFFLTVSAFNTAGTGPFL 890
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-----RVWEV 536
T + P +PP + I + + + W V+ + E + GYK+ R EV
Sbjct: 891 PAINVTTKKPPPAQPPMNIEWTLIG-SQLSLYWEPVAATESESEVTGYKLSYRRQRHKEV 949
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+ ++ AN T A++ + Y +R+ S GG G S P
Sbjct: 950 NA-LTTANST---------AELTLPEEEEDYVIRIQTLSEGGLGPASEP 988
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P P+ WK+ + + + N L I +DD+G Y C
Sbjct: 242 AARGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECV 301
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + + GRL P + + + +A L C A+ + +Y W NG
Sbjct: 302 AENRMGKNTATGRLAFYAKPQWIQAV-KDAALAIEERLHWECRANGKP--KPSYTWLKNG 358
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-EGPP 180
++ + D I + G+L ++ + +DAG Y+CV ++ G I ++V PP
Sbjct: 359 QQLLSGD-------RITVVDGVLSVSALALSDAGMYQCVAENKHGVIYFAAELMVLASPP 411
Query: 181 GLPGGV 186
G V
Sbjct: 412 DFTGNV 417
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLISPVSR-DDSGIYSCTATNVH 66
T+ C+ + P P++ W +G +I G RR+ GNL+IS + R D G+Y C A N
Sbjct: 50 TLTCDAKGVPPPQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAFNAA 109
Query: 67 GMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---- 121
G S + L + + +++ + + L C T D+ Y W N
Sbjct: 110 GAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSS-GDLTYAWVFNEYPYF 168
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGP 179
V+ N +T N L + +D G Y CVV ++V GK+ + T ++
Sbjct: 169 VQQDNRRFVSQQTGN-------LYVAKVEPSDVGNYTCVVTNSVTKGKVHSSPTALILKT 221
Query: 180 PGLPG 184
G+ G
Sbjct: 222 DGVMG 226
>gi|402895019|ref|XP_003910635.1| PREDICTED: contactin-5-like, partial [Papio anubis]
Length = 573
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 262/551 (47%), Gaps = 27/551 (4%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
I +G+L I S+ D G Y C NV G E L V P+ E P + + +
Sbjct: 3 ILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKE-PTRIELTPKRTELTVGES 61
Query: 99 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LETPNINIDGGLLEITNASFADA 154
+ L C A + LDV + WT G I D E E+ L I N A
Sbjct: 62 IVLNCKAIHDASLDVTFYWTLKGQPI---DFEEEGGHFESIRAQASSADLMIRNILLMHA 118
Query: 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ A N PI+ Y
Sbjct: 119 GRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPISSYN 178
Query: 215 IIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273
+ AR+ ++ W V K V + TG E+++ L PW YEF+V+A N +G G+P
Sbjct: 179 LQARSPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDP 232
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 333
S+PS T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 233 STPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGT 291
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
E + + R S T +EVKV N+ G GP S++V I SAE P A
Sbjct: 292 RGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAA 351
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V + + + I V W + I+E++ GR G + YWK+ E+ A +R ++
Sbjct: 352 PTDVKATSVSVSEILVAW---KHIKESL-GRPQGFEVGYWKDMEQEDAAETVKTRGNESF 407
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
++ GL+ +T Y+ V AYN AG GP S T + P + PS + + + V +
Sbjct: 408 VILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEQ-QGSQVSLG 466
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W V P E ++GYKV + S+ +T L A +V L Y + V A
Sbjct: 467 WEPVIPLANESEVVGYKVFYRQEGHSNSQVIET-----QKLQA-VVPLPDAGVYIIEVRA 520
Query: 574 FSNGGDGRMSS 584
+S GGDG SS
Sbjct: 521 YSEGGDGTASS 531
>gi|52138691|ref|NP_001004395.1| contactin-2 precursor [Gallus gallus]
gi|114735|sp|P28685.1|CNTN2_CHICK RecName: Full=Contactin-2; AltName: Full=Axonin-1; Flags: Precursor
gi|62853|emb|CAA44815.1| axonin-1 [Gallus gallus]
Length = 1036
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 271/532 (50%), Gaps = 13/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C P AAPK +W K ++ + R I +G L++ +S+ D G Y+C
Sbjct: 425 AARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCF 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + W+ +
Sbjct: 485 AENFMGKANSTG-ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDD 543
Query: 122 VRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I ++D +E ++ G L I NA +G Y C ++ V S T+ V GP
Sbjct: 544 FPI-DLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGP 602
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y I ART ++ W + + + E
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE--- 659
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 660 --GNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGG 717
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+W P R+ QN Y + +RKK + + + ++ V R S Y
Sbjct: 718 APNELIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHY-VYRNESIGPY 776
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK++A N G GPES ++SAE+ P+VAP V ++ S+ ++V+W P+E +
Sbjct: 777 TPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVE--QG 834
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++ G L+G+ I+YWK+ + EE A + A + GL P+TKY+V V AYN AG GP
Sbjct: 835 DMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGP 894
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +TV + W V +E + GYK+
Sbjct: 895 PSPSTNITTTKPPPRRPPGNISWT-LTGSTVTIKWDPVVAQADESAVTGYKM 945
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P +
Sbjct: 673 WMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPT--L 730
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
R+ G G+ + + K+ P +++Y+ R + P T + VK+
Sbjct: 731 RDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHYVYRNE-------SIGPYTPFEVKI 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
AYN GEGPES + + + P+ P V K + + + V+W V ++GY
Sbjct: 784 KAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGY 843
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++R W+ D D A D + G A + L+P +YH+ V A++ G G
Sbjct: 844 EIRYWK-DGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAG 893
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + + L I V +D G Y C
Sbjct: 245 YALTGQMVTLECFAFGNPVPQIKWRK---LDGSQTSKWLSSEPLLHIQNVDFEDEGTYEC 301
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G D +GR+I+ P + + + A LR S A W +
Sbjct: 302 EAENIKGRDTYQGRIIIHAQPDWLDVI---TDTEADIGSDLRWSCVASGKPRPAVRWLRD 358
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + I + GG L + D+G Y+CV ++ G + + V+
Sbjct: 359 GQPLASQN-------RIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 69/178 (38%), Gaps = 33/178 (18%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
VT+ C A P + WK +G + G R G+L+IS PV D+G Y C ATN
Sbjct: 52 VTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNA 111
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHN 120
G E+ R L S E+ P KIT + CS H L +Y W N
Sbjct: 112 RGTVVSREASLRFGFLQEFSAEERDPVKIT--EGWGVMFTCSPPPHYPAL---SYRWLLN 166
Query: 121 GVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKIS 169
E PN I DG G L I +D G Y C S + I+
Sbjct: 167 ------------EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>gi|348514836|ref|XP_003444946.1| PREDICTED: contactin-3-like [Oreochromis niloticus]
Length = 1086
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 186/592 (31%), Positives = 275/592 (46%), Gaps = 23/592 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A P +WKK I + R + +G L ++ VS+ D+G Y+C
Sbjct: 484 AKAGTTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSYTCF 543
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N GM + GRL+V P+ Q P I ++ L C ++ +LDV++ W NG
Sbjct: 544 ARNRFGMSSTTGRLLVTD-PTRIIQGPVDTEIIVGESIVLPCQVASDPVLDVSFSWAFNG 602
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I D E G L+ I N AG+Y CVV + V +S +IV+GPP
Sbjct: 603 QLIAKGD-GHFEFVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGPPS 660
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V V EV ++A + W+ G NG PIT+Y I RT + W V + + + +D
Sbjct: 661 PPDSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRV--NTVPEIID--- 715
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G + L W Y+F+V+A N +G GEPS S + T P P +GGGGG
Sbjct: 716 GNTLTATVVDLNAWVEYDFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAVPGDVGGGGGSR 775
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN + Y I +R + + G V R S ++
Sbjct: 776 YELVITWEPVPEELQNGESFGYIIAFRAFGEASWTHVATSAPG-ASRYVYRNDSIAPFSP 834
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+ VKV N G GP S VVTI+SAE P P GV +R +++ I V W + I E
Sbjct: 835 FHVKVGTYNSKGQGPFSPVVTIYSAETEPSEKPAGVRARSVSASEIEVNWQALSFIPE-- 892
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
R++G+ + YW++D ET + A + GL +T+Y++ V A+N AG P
Sbjct: 893 --RVLGYEVAYWEDDTKPETMGKVRVPWNQTSATVSGLAGNTQYFLTVSAFNTAGTSPFL 950
Query: 482 ERYLERTYRKAPQKPPSAV--HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
T + P +PP V ++ G + + V W V E ++GY ++
Sbjct: 951 PAINVTTKKPPPSQPPMNVGWNLMG---SQLSVYWEPVVAMESESDVLGY-----QLSYQ 1002
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
R + I A++ + Y + V S GG G S P Q+
Sbjct: 1003 RQRHKEVITLTTVNATAELTLPEDDEEYIIFVQTLSEGGLGPASDPIRIHQL 1054
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G VT+ C P P+ W++ + + + N L I +DD+G Y C
Sbjct: 302 AAKGSTVTLECFALGNPVPEITWRRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECV 361
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + GRL P + + + +A L C A+ +Y W NG
Sbjct: 362 AENKMGKNTVSGRLAFYAKPQWVQTM-KDTALAIEERLYWECRANGRP--KPSYTWLKNG 418
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-EGPP 180
++ + D I+++ G+L ++ + +DAG Y+CV ++ G I ++V PP
Sbjct: 419 QQLLSED-------RIHVEDGVLSVSALTLSDAGMYQCVAENKHGVIYFAAELMVLASPP 471
Query: 181 GLPGGV 186
G +
Sbjct: 472 DFTGNL 477
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLISPVSR-DDSGIYSCTATNVH 66
T+ C+ + P P++ W +G +I G RR+ GNL+IS + R D G+Y C A N
Sbjct: 110 TLTCDAKGTPSPQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAYNTV 169
Query: 67 GMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---- 121
G S + L + + +++ + + L C T D+ Y W N
Sbjct: 170 GAILSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSS-GDLTYAWIFNEYPYF 228
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGP 179
V+ N +T N L I +D G Y CVV +++ GK+ + T ++
Sbjct: 229 VQQDNRRFVSQQTGN-------LYIAKVEPSDVGNYTCVVMNSITKGKVQSSPTSLILRT 281
Query: 180 PGLPG 184
G+ G
Sbjct: 282 DGVMG 286
>gi|301765666|ref|XP_002918250.1| PREDICTED: LOW QUALITY PROTEIN: contactin-2-like [Ailuropoda
melanoleuca]
Length = 1040
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 179/531 (33%), Positives = 262/531 (49%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + G L+I +SR D G Y+C
Sbjct: 430 AARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPGGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I +L L+C A + +D+ +IWT +
Sbjct: 490 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V + T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTVPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYVLSFRRQGSSGWQTARVPG-ADAQHFVYSNDSVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK++ N GPES ++SAE+ P+VAP V+++G +S+ +NVTW P + ++
Sbjct: 783 PFEVKIRGYNRRXDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPGQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L+G+ I+YW+ + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 TNGILLGYEIRYWRAGDKEAAADRVRTAGLDTRARVTGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + PQ+PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPQRPPGNISWT-FSSSSLSIKWDPVVPLRNESAVTGYKM 949
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A +++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYVLSFRRQGSSGWQTARVPGADAQHFVYSND-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP--II 527
YN +GPES L + + P+ P+ V KG++ + ++VTW P ++ ++
Sbjct: 789 RGYNRRXDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWE---PGQQDTNGILL 845
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++R W D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 846 GYEIRYWRAG-DKEAAADRVRTAGLDTRARVTGLHPNTKYHVTVRAYNRAGTGPASPSAN 904
Query: 588 TFQM 591
M
Sbjct: 905 ATTM 908
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 341 GSNLGWGCAAAGKPRPTVRWLRNGEPLASQPRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 399
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + P K I A R ++ +W+ G I
Sbjct: 400 KHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVVLWS-KGTEI 458
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
TP GG L I N S +D G+Y C ++ +GK ++
Sbjct: 459 LVNSSRVTVTP-----GGTLIIRNISRSDEGKYTCFAENFMGKANS 499
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPQIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + NL C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRVIVQAQPEWLKVI-SDMEADIGSNLGWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + P + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQ-------PRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 71/179 (39%), Gaps = 30/179 (16%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
VT+ C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 57 VTLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNP 116
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
G E+ R L S E+ P + L AH L +Y W N
Sbjct: 117 VGTVVSREAVLRFGFLQEFSKEERDPVRTHEGWGVMLPCNPPAHYPGL---SYRWLLN-- 171
Query: 123 RIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 ----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|405969232|gb|EKC34215.1| Contactin [Crassostrea gigas]
Length = 820
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 294/634 (46%), Gaps = 54/634 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C PE APKP+ W K+ + S R +I N L I+ ++ D G Y C
Sbjct: 156 AALNGEVVIPCEPEGAPKPEITWLKNNVQVNSDSRVQIMPNNFLKITQINYGDQGYYECR 215
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A NV G D S RL V + P+ + ++ + CSA + LD+ Y+WT +G
Sbjct: 216 AKNVLGSDGSFCRLNVKVATTITRAPNPETPVYQNKTALIYCSASYDLSLDLVYVWTFSG 275
Query: 122 VRIGNMDLN-ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+I ++ N E N+ GL I A F G YEC+ ++ + + + +IV GPP
Sbjct: 276 -KILDLQRNGHYELANLPSGKGLY-IKMAQFYHEGTYECIARTPLNEARAQGRLIVYGPP 333
Query: 181 GLPGGVQVVEVHKTSATIQ--WTDGATNGRPITHYKIIA-----------RTNWNSTWFN 227
G G+ T+ +I + GA++ R Y I+ +N T F
Sbjct: 334 GEVAGLYADPGTPTTNSIDIFFFLGASH-RSTIEYLIVEFEIQSEKGKWYFSNETHTVFA 392
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
S + G D T L P + Y F++ A N LG G P +PS NT P
Sbjct: 393 PSTVIPGNNRDMRTITVRG-----LDPGNGYSFRIKAVNALGVGPPCTPSGTVNTLEAPP 447
Query: 288 YQAPSRIGGG--GGKIGDLSISWEPLPREK---QNAPNIYYKIFWRKKN-----DTEFQS 337
P+ + G ++G L ++W+ LP+ Q ++ Y +++R+ D +
Sbjct: 448 AAPPANLSSRTEGVEVGQLMLTWKKLPKRYHGVQLESDVSYIVYYRQLKVSAAPDALWNM 507
Query: 338 ETLKEYGNVGI------------AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS 385
+++ NV + V+++ +F++TE+E K+Q N G S +V ++S
Sbjct: 508 ASIQTLRNVVVVHEVITDWEQEEVVIQVGEDFFWTEFETKIQTKNPHGRSHNSSIVVVYS 567
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A MP P ++ G+NSTA+ V W P+ R I+G+L G+++ Y+ E+ +
Sbjct: 568 AMGMPVAVPTNIWGEGYNSTALTVHWEPVPDTRNEIKGKLGGYQVLYYLRTQDEDDTKDF 627
Query: 446 LSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA 499
R RN +++GL PDT YYV+V + +AG GP E+ L T AP P
Sbjct: 628 KHRQAIRFHGQRNSGVVIGLSPDTYYYVQVQVFTDAGLGPLGEKNLAETMNPAPALYPQE 687
Query: 500 VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNT-LDADI 558
V + + ++V V+WR VS E+ + GY V VW+ ++ +A I VG + +
Sbjct: 688 VKVVSKDASSVVVSWRGVSTGQAEDSLKGYVVFVWKANEHFRQAKP--IDVGKFPTEYTL 745
Query: 559 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ Y +RV +S GG GR SP + F +
Sbjct: 746 SGIEKDYVYAVRVAGYSFGGIGR-KSPTLYFTLA 778
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI--SPVSRDDSGIYSCT 61
EG +VT C P P + W K+G ++ I N N L + + G+Y C
Sbjct: 63 EGADVTWRCLAYGKPTPVYSWYKNGVLLQPTADSGITINRNTLTLRNANKQKHEGMYQCA 122
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
ATNVHG S ++ VL + + P +I A N ++ E W N
Sbjct: 123 ATNVHGSSLSAAQIRVLSFKPTFAKYPLPESIDAALNGEVVIPCEPEGAPKPEITWLKNN 182
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
V++ N D PN L+IT ++ D G YEC K+ +G
Sbjct: 183 VQV-NSDSRVQIMPN-----NFLKITQINYGDQGYYECRAKNVLG 221
>gi|441633559|ref|XP_003252559.2| PREDICTED: contactin-1 [Nomascus leucogenys]
Length = 1017
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 292/597 (48%), Gaps = 40/597 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDGGLL----EITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
I D N+ NI+ + EI + + + E + +G + I
Sbjct: 545 YVI---DFNK---ENIHYQRNFMMIAAEIHVVTLSASPEQSPDRRLNLGTHHLRFQFIPS 598
Query: 178 G--PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W +
Sbjct: 599 NNGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPII 658
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
E G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +G
Sbjct: 659 E-----GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVG 713
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
GGGG+ +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 714 GGGGRNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDET 772
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T ++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E
Sbjct: 773 MSPSTAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---E 829
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+ E I + ++I+YW + EE A + A + L PDT+Y+++V A N+A
Sbjct: 830 HVLEKI---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSA 886
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ T + P +PP I I + + +TW +V E + GYKV
Sbjct: 887 GCGPPSDMIEAFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYR 944
Query: 535 ---EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 945 PDGQHDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 992
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQASPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
>gi|432866116|ref|XP_004070706.1| PREDICTED: contactin-3-like [Oryzias latipes]
Length = 1038
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 186/624 (29%), Positives = 291/624 (46%), Gaps = 25/624 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A P +WKK + + R + +G L ++ VS+ D+G Y+C
Sbjct: 424 AKAGTTVTLECKPKAYPTANILWKKGNLPVQTNDRVTLSPDGTLRLANVSKSDAGSYTCF 483
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N GM + GRL+V P+ + Q P + I ++ L C ++ +LDV++ W NG
Sbjct: 484 ARNRFGMSSTTGRLLVTD-PTRFIQGPVDMEIIVGESIVLPCQITSDPVLDVSFSWAFNG 542
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I D E G L+ I N +G+Y CVV + V +S +IV+G P
Sbjct: 543 QLIAKGD-GHFELVGGRTAGDLM-IRNIQLYHSGKYICVVDTDVESLSAVAVLIVKGAPS 600
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW--FNVSEHVIGKEVDR 239
P V V EV ++A + W+ G NG PIT+Y I RT + W N +I
Sbjct: 601 PPDSVTVEEVTDSTAQLAWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEII------ 654
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+G + L W YEF+V+A N +G GEPS S + T P AP +GGGGG
Sbjct: 655 -SGNTLTATVVDLNAWVEYEFRVLAKNSVGVGEPSPISVKTRTEDAVPDVAPGDVGGGGG 713
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+WEP+P E QN + Y I +R + + G V R S +
Sbjct: 714 SRSELVITWEPVPEELQNGESFGYIIAFRAFGEVSWIHVATSAPG-ASRYVYRNDSIAPF 772
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
+ + VKV N G GP S VVTI+SAE P P GV++R +++ I V W + + E
Sbjct: 773 SPFHVKVGTYNSKGQGPFSPVVTIYSAETEPSGMPVGVWARSVSASEIEVNWQALSITPE 832
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
R++G+ + YW++D ET + + GL +++Y++ V A+N AG GP
Sbjct: 833 ----RVLGYEVVYWEDDTKPETMGKVRVPWNQTSVTVSGLAGNSQYFLTVSAFNTAGTGP 888
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
T + P +PP V I + + + W V E + GY++ +
Sbjct: 889 FLPAINVTTKKPPPAQPPLNVEWTLIG-SQLSLYWEPVVAMESESEVKGYQL---SYRRQ 944
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ +T+ +T A++ Y +R+ S GG G S P ++ K
Sbjct: 945 RHKEVNTLTTSNST--AELTLPEGDDDYIIRIQTTSEGGLGPASDPIRIHKL--SKLVAR 1000
Query: 600 GSPALYSASTTLLLVMSSTLYIFV 623
GS A + + + L ++ +++ +
Sbjct: 1001 GSRAWSADVSPVSLFLAMLMFLII 1024
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G VT+ C P P+ W++ I + + N + I +DD+G Y C
Sbjct: 242 AAKGTTVTLECFALGNPVPEITWRRANGIPFPSKVKMKYSNAVMEIPSFQQDDAGGYECV 301
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + + GRL P + + + +A L C A+ + +Y W NG
Sbjct: 302 AENKMGKNTAAGRLAFYAKPQWIQTM-KDTALAIEERLNWECRANGKP--KPSYTWLKNG 358
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-EGPP 180
++ + D ++E G+L ++ + DAG Y+CV ++ G I ++V PP
Sbjct: 359 QQLLSDDRTDVE-------DGVLSVSMLTLTDAGMYQCVAENKHGVIYFAAELMVLASPP 411
Query: 181 GLPGGV 186
G V
Sbjct: 412 DFTGNV 417
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVH 66
T+ C+ + P P++ W +G +I S RR+ GNL+IS + R D GIY C A N
Sbjct: 50 TLTCDAKGTPAPQYRWSLNGTLINLSLDRRRRLSGGNLIISSLDRYQDVGIYQCMAYNTV 109
Query: 67 GMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG---- 121
G S + L + + +++ + + L C T D+ Y W N
Sbjct: 110 GAVLSRRASLQFAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSS-GDLTYAWVFNEYPYF 168
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGP 179
V+ N +T N L I+ +D G Y CVV +++ GK+ + T +
Sbjct: 169 VQQDNRRFVSQQTGN-------LYISKVEPSDVGNYTCVVMNSITKGKVHSSPTSLNLRT 221
Query: 180 PGLPGGVQ-VVEVH 192
G+ G + +EVH
Sbjct: 222 DGVMGEYEPKIEVH 235
>gi|350591360|ref|XP_003132375.3| PREDICTED: contactin-3 [Sus scrofa]
Length = 840
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 268/569 (47%), Gaps = 25/569 (4%)
Query: 24 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSY 83
++K +++ R +I ENG L IS ++ DSG++ C A N HG+ S L V+
Sbjct: 246 FRKTSHLLNLDERIQI-ENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPD 304
Query: 84 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNELETPNINI 139
+ + P K I ++ W V + D + + + P++
Sbjct: 305 FSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRYSVVQKDDGPHLCR 364
Query: 140 D-----GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT 194
+ G L I N +G Y C+V++ V +S+ +IV G PG P V+V E+ T
Sbjct: 365 EEGQESSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENVKVDEITDT 424
Query: 195 SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 254
+A + W +G N P+ Y + ART ++ W + + + +D G+ + L P
Sbjct: 425 TAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTAT--TVPEVID---GKTHTATVVELNP 479
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
W YEF+V+A N++G GEPS PS + T P PS + GGGG +L I+W+P+P E
Sbjct: 480 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEE 539
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
QN Y + +R T + +T+ + V R S ++ YEVKV N+ G
Sbjct: 540 LQNGEGFGYVVAFRPLGVTNW-IQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNNKGE 598
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK 434
GP S V +FSAE+ P +AP V + +S+ I V+WN + N G L+G+ ++YW
Sbjct: 599 GPFSPVTAVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAVPWKLSN--GHLLGYELRYWN 656
Query: 435 EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494
EE++ A + GL+ + YY V A+N+AG GP S T + P
Sbjct: 657 NGGEEESSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKTPPS 716
Query: 495 KPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL 554
+PP V + T V + W V E + GYKV Q+ + +T N
Sbjct: 717 QPPGNV-VWNATDTKVLLNWEQVRAMENESEVTGYKVFYRTSSQNNVQVLNT-----NKT 770
Query: 555 DADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
A+++ L + Y + V A ++GGDG S
Sbjct: 771 SAELL-LPIKEDYIIEVKATTDGGDGTSS 798
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 138/632 (21%), Positives = 239/632 (37%), Gaps = 97/632 (15%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F +G L I ++D+G Y C
Sbjct: 121 AAKGSTVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKF-SGVLEIPNFQQEDAGSYEC 179
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL------DVA 114
A N G + ++GRL +YY + + L + C +EL DV+
Sbjct: 180 IAENSRGKNVARGRL------TYYGEPSLECIGFLAFALSIDCYREIDELFLRIGDADVS 233
Query: 115 -----YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI- 168
H R + LN E I I+ G L I+N + D+G ++C+ ++ G I
Sbjct: 234 PAVHSTCIMHCEFRKTSHLLNLDE--RIQIENGALTISNLNVTDSGMFQCIAENKHGLIY 291
Query: 169 STKTTVIVEGPPGLPGG--VQVVEVHKTS-------------ATIQWTDGATNGRPITHY 213
S+ +V P ++++V S A W G + Y
Sbjct: 292 SSAELKVVASAPDFSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRY 351
Query: 214 KIIARTNWNSTWFNVSEHVIGKEVDR-----YTGRKEASIENVLVPWSTYEFKVIAGNEL 268
++ + + + G + R ++GR ++ + S+ ++ G
Sbjct: 352 SVVQKDDGPHLCREEGQESSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRG--- 408
Query: 269 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 328
SP P N D+ +++ SW+ ++P I Y + R
Sbjct: 409 ------SPGPPENVKVDEITDTTAQL------------SWKE--GTDNHSPVISYSVQAR 448
Query: 329 KKNDTEFQSET-LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSA 386
+Q+ T + E + + + EYE +V A N +G G P + +
Sbjct: 449 TPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTE 508
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446
E +P+V P V G + + + +TW+P+ +N G G+ V +
Sbjct: 509 EAVPEVPPSEVSGGGGSRSELVITWDPVPEELQN--GEGFGY-------------VVAFR 553
Query: 447 SRTTRNWALIVGLQPDTKYYV--------------KVMAYNNAGEGPESERYLERTYRKA 492
NW V PDT YV KV YNN GEGP S + +
Sbjct: 554 PLGVTNWIQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNNKGEGPFSPVTAVFSAEEE 613
Query: 493 PQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN 552
P PS V ++ + + V+W V ++GY++R W + ++ + GN
Sbjct: 614 PTIAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYELRYWN-NGGEEESSSKLKVAGN 672
Query: 553 TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
A + L Y+ V AF++ G G S+
Sbjct: 673 VTSARLRGLKSNLAYYTAVRAFNSAGTGPFSA 704
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 78/194 (40%), Gaps = 24/194 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L I+ V D G Y+
Sbjct: 18 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVETSDVGNYT 77
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + ++ G P Q P + A ++L C A
Sbjct: 78 CVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 137
Query: 110 LLDVAYIWTHNGVRIGN-MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ + + + +G+ N + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 138 VPQINWRRS-DGLPFSNKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGKN 188
Query: 169 STKTTVIVEGPPGL 182
+ + G P L
Sbjct: 189 VARGRLTYYGEPSL 202
>gi|432092483|gb|ELK25098.1| Contactin-6 [Myotis davidii]
Length = 760
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 263/557 (47%), Gaps = 26/557 (4%)
Query: 31 IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPK 90
+ SG + E+G+L I SR D+G Y+C ATN G+ S G L+V + + P
Sbjct: 164 LCSGKVVFVLEDGSLKIQNASRSDAGPYTCVATNPFGVARSTGGLVVKER-TIITEPPSP 222
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL---LEIT 147
+ + ++ L C + ++VA++W+ NG I DL + I GG L I
Sbjct: 223 MDVTVGESIVLTCQVSHDPSMEVAFVWSFNGHII---DLKKDAAHFERIGGGSVGDLMIR 279
Query: 148 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 207
N + +G Y C V + + +S +IV GPP V+V + T++ + W G+ N
Sbjct: 280 NIQLSHSGRYLCAVTTALENLSAVAEIIVRGPPE---EVRVEHISSTTSQLSWRPGSDNN 336
Query: 208 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 267
PI + I ART ++ W VS + G+ + L+PW YEF+V+AGN
Sbjct: 337 SPIQIFTIQARTPFSVGWQAVS-----TVPEILNGQTYNATVVGLIPWVEYEFRVLAGNS 391
Query: 268 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 327
+G GEPS S T A P AP+ I GGGG +L ++WEP+P E Q+ Y +
Sbjct: 392 IGIGEPSKASELLRTKASVPIVAPTNIQGGGGSRSELVVTWEPIPEELQSGGEFGYLVML 451
Query: 328 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE-SEVVTIFSA 386
R + E + V R S + +EVKV N G G S V ++S
Sbjct: 452 RPVGSAIWTKERVPSV-EASRFVYRNESITPLSPFEVKVGVYNSEGEGAALSTVSIVYSG 510
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446
ED PQ+AP+G ++ F+++ + V+W I R I GR++G+ + YW +D+ E
Sbjct: 511 EDEPQLAPRGTSAQSFSASEMEVSWTAIAWNR--ITGRVLGYEVLYWTDDSREPMIGKVR 568
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506
I+GL+ +T Y+ V AYN G GP S T + P +PP+ + K N
Sbjct: 569 VHGNITTKTIMGLKANTIYFASVRAYNTGGTGPSSPPVNVTTKKSPPSQPPANIAWKLTN 628
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566
+ + + W +V E ++GYK+ + Q + I+ NT +V +
Sbjct: 629 -SKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTH----ILETNNTSAELLVPFE--ED 681
Query: 567 YHMRVLAFSNGGDGRMS 583
Y + + S+GGDG S
Sbjct: 682 YLIEIRTVSDGGDGSSS 698
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C + P+P + W K+G +G+ R ++ ENG L I+ ++ DSG+Y C A N H +
Sbjct: 68 CKAQGKPRPWYTWLKNGERLGAEERIQV-ENGTLTITMLNVSDSGVYQCAAENKHHTIYA 126
Query: 72 KGRLIVLHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130
L VL + P +T+ R C+ V ++
Sbjct: 127 NAELRVLAFLALSPASPGWALTMGRLRAAPPACTLPQLCSGKVVFV-------------- 172
Query: 131 ELETPNINIDGGLLEITNASFADAGEYEC-------VVKSTVGKISTKTTVIVEGP 179
++ G L+I NAS +DAG Y C V +ST G + + T+I E P
Sbjct: 173 --------LEDGSLKIQNASRSDAGPYTCVATNPFGVARSTGGLVVKERTIITEPP 220
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 16/235 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G S+ + + +P VAP + G + + + VTW PI E
Sbjct: 379 WVEYEFRVLAGNSIGIGEPSKASELLRTKASVPIVAPTNIQGGGGSRSELVVTWEPIPEE 438
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G L+ R + KE P A ++ R + P + + VKV
Sbjct: 439 LQSGGEFGYLVMLRPVGSAIWTKERVPSVEASRFVYRNE-------SITPLSPFEVKVGV 491
Query: 472 YNNAGEGPE-SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YN+ GEG S + + PQ P + + + + V+W ++ + ++GY+
Sbjct: 492 YNSEGEGAALSTVSIVYSGEDEPQLAPRGTSAQSFSASEMEVSWTAIAWNRITGRVLGYE 551
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
V W D + GN I+ L Y V A++ GG G S P
Sbjct: 552 VLYWTDDSREPMIGKVRVH-GNITTKTIMGLKANTIYFASVRAYNTGGTGPSSPP 605
>gi|281349789|gb|EFB25373.1| hypothetical protein PANDA_019648 [Ailuropoda melanoleuca]
Length = 574
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 272/586 (46%), Gaps = 25/586 (4%)
Query: 36 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 95
R + +G+L I S+ D G Y+C NV G E + V P+ E P + +
Sbjct: 1 RIAVLPDGSLRILNASKSDEGKYTCQGENVFGSAEIIASVSVKE-PTRIELTPKRTELTV 59
Query: 96 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 154
++ L C A + LDV + WT G I + E+ L I N A
Sbjct: 60 GESIVLNCRAIHDASLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHA 119
Query: 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ N PI+ Y
Sbjct: 120 GRYGCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPATDNHSPISSYN 179
Query: 215 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 274
+ AR+ ++ W + + TG E+++ L PW YEF+V+A N +G G+PS
Sbjct: 180 LQARSPFSLGW-----QTVKTIPEIITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPS 234
Query: 275 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 334
+PS T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 235 TPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTR 293
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
E + + R S T +EVKV N+ G GP S++V I SAE P AP
Sbjct: 294 GWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPSAAP 353
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
V + + + I V W + I+E++ GR G + Y K+ E+ A +R +
Sbjct: 354 TDVKATSMSVSEILVAW---KHIKESL-GRPQGFEVGYRKDMEQEDAAETVKTRGNESSV 409
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++ GL+ +T Y+ V AYN AG GP S T + P + PS + + + + + W
Sbjct: 410 ILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKFPPSQAPSNLRWEQ-QGSQLSLGW 468
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
V P E ++GYKV + S+ +T P +V L Y + V A+
Sbjct: 469 EPVRPLANESEVMGYKVFYRQESHSNSQVIETQKPQA------VVPLPDAGVYIIEVRAY 522
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPALY-----SASTTLLLVM 615
S+GGDG M+S I + S L+ S+S TLLL +
Sbjct: 523 SDGGDG-MASSQIRVPSYSGGKVTSAQSTLHTLSPSSSSVTLLLAL 567
>gi|296230542|ref|XP_002760749.1| PREDICTED: contactin-2 [Callithrix jacchus]
Length = 1040
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 179/535 (33%), Positives = 263/535 (49%), Gaps = 20/535 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLVIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTSVKETIGDLTILNAQLRHGGKYACMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYILQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S Y
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYM 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ +
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNVTWEPVQ---QE 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YW+ + E A + A + GL P TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWRAGDKEAAADRVRTAGLDTSARVSGLHPSTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPT----TVHVTWRYVSPSFEEEPIIGYKV 531
S T KP + I+ T ++ + W V P E + GYK+
Sbjct: 900 SPSANATT-----MKPLRGGLLATISWTFSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYMPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPKVAPTKVWAKGVSSSEMNVTWEPVQQEMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWRAG-DKEAAADRVRTAGLDTSARVSGLHPSTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + A W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKP--RPAVRWLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G ++ G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTDMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|55976512|sp|Q8AXZ4.1|CNT1A_DANRE RecName: Full=Contactin-1a; AltName: Full=F3/F11/contactin; AltName:
Full=Neural cell recognition molecule F11; Flags:
Precursor
gi|23345063|gb|AAN17734.1| recognition molecule F3/F11/contactin [Danio rerio]
Length = 1032
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 282/597 (47%), Gaps = 35/597 (5%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G V C P AAP+P W K ++ + R I+ +G+L + +S+ D G Y+C A
Sbjct: 437 ARNGRVVFECRPRAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFA 496
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G S G L + + P ++ + ++ C A + LD+ +IW+ +G
Sbjct: 497 ENDRGRANSTGSLSITDA-TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGH 555
Query: 123 RIG-NMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I D + + G L IT+ AG Y C ++ V + ++V G
Sbjct: 556 TINLQRDAQHYQRKMDSASGTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRG 615
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEV 237
PPG PGGV+V EV S + W+ G N PI+ Y + R + W + + + E
Sbjct: 616 PPGPPGGVRVDEVTSDSVRVLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE- 674
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E + L+PW+ YEF+VIA N LG G PS PSP+ T +P APS IGGG
Sbjct: 675 ----GNAEMATVVNLLPWTEYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGG 730
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L+I+W P+ + N Y I ++ ND E+ T+ + V + P
Sbjct: 731 GGTSRELTITWTPVQSQYYYGSNFGYIIAFKPHNDPEWLRVTVTD-PEAQKYVHKDPKIP 789
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
T +EVK++A N G GP S I+SA+D+P AP +R ++T V W P++L
Sbjct: 790 PSTRFEVKMKAFNSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQL- 848
Query: 418 RENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ ++++YW+E E +A L + N + ++PD+ Y V+V A N AG
Sbjct: 849 -----PTVERYQVRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAG 903
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
GP S+R T + P +PP + K + T++++ W V E + GYKV +
Sbjct: 904 YGPASQRNRIYTKKSPPSRPPKIISTKMHYSGTSINIAWEKVESLNNESTVAGYKVLYRQ 963
Query: 536 VDQDMSRANDTIIPVGN--TLDADIVDLSPGKR--YHMRVLAFSNGGDGRMSSPAIT 588
Q P G T + +DL P +R Y + V A S GGDG ++ IT
Sbjct: 964 HGQ----------PSGTLYTTEKQSIDL-PMRRGEYLVEVRAHSEGGDGAVAQVRIT 1009
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ + C PKP + K+G++ G + S + +DSG+Y C A N
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF--------SRLGFEDSGMYQCVAEN 405
Query: 65 VHGMDESKGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI----WT 118
HG+ + L V PS+ Y + PK+ A + + C ++ +
Sbjct: 406 RHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTELL 465
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
HN RI +I +DG LE+ N S +D G+Y C ++ G+ ++ ++ +
Sbjct: 466 HNSSRI-----------SIWLDGS-LELLNISKSDEGKYTCFAENDRGRANSTGSLSI 511
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
+A G NVT+ C P P+ W+K ++ R + +G LL + + +D G+Y
Sbjct: 260 WALLGQNVTLECFALGNPIPQIRWRKLDGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYE 318
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D K L V P + EQ+ + +E + YI +
Sbjct: 319 CEADNSKGKDWHKTHLYVEGAPDWLEQI-----------------SSSEVDIGGDYIMSC 361
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ L+ ++ + G + + F D+G Y+CV ++ G I + V
Sbjct: 362 QASGKPKPHVHFLKNGHMYMKGHEVRFSRLGFEDSGMYQCVAENRHGVIHANAELRV 418
>gi|136256388|ref|NP_851300.2| contactin-1a precursor [Danio rerio]
gi|134054472|emb|CAM73230.1| cntn1a [Danio rerio]
Length = 1032
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 283/594 (47%), Gaps = 35/594 (5%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
G V C P AAP+P W K ++ + R I+ +G+L + +S+ D G Y+C A N
Sbjct: 440 GRVVFECRPRAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFAEND 499
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G S G L + + P ++ + ++ C A + LD+ +IW+ +G I
Sbjct: 500 RGRANSTGSLSITDA-TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGHTID 558
Query: 126 -NMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D + + G L IT+ AG Y C ++ V + ++V GPPG
Sbjct: 559 LQRDAQHYQRKMDSASGTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRGPPG 618
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEVDRY 240
PGGV+V EV S + W+ G N PI+ Y + R + W + + + E
Sbjct: 619 PPGGVRVDEVTSDSVRVLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE---- 674
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW+ YEF+VIA N LG G PS PSP+ T +P APS IGGGGG
Sbjct: 675 -GNAEMATVVNLLPWTEYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGGGGT 733
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W P+ + N Y I ++ ND E+ T+ + V V + P T
Sbjct: 734 SRELTITWTPVQSQYYYGSNFGYIIAFKPHNDPEWLRVTVTD-PEVQKYVHKDPKIPPST 792
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK++A N G GP S I+SA+D+P AP +R ++T V W P++L
Sbjct: 793 RFEVKMKAFNSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQL---- 848
Query: 421 IRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ ++++YW+E E +A L + N + ++PD+ Y V+V A N AG GP
Sbjct: 849 --PTVERYQVRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAGYGP 906
Query: 480 ESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S+R T + P +PP + K + +++++ W V E + GYKV + Q
Sbjct: 907 ASQRNRIYTKKSPPSRPPKIISTKMHYSGSSINIAWEKVESLNNESTVAGYKVLYRQHGQ 966
Query: 539 DMSRANDTIIPVGN--TLDADIVDLSPGKR--YHMRVLAFSNGGDGRMSSPAIT 588
P G T + +DL P +R Y + V A S GGDG ++ IT
Sbjct: 967 ----------PSGTLYTTEKQSIDL-PMRRGEYLVEVRAHSEGGDGAVAQVRIT 1009
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ + C PKP + K+G++ G + S + +DSG+Y C A N
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF--------SRLGFEDSGMYQCVAEN 405
Query: 65 VHGMDESKGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI----WT 118
HG+ + L V PS+ Y + PK+ A + + C ++ +
Sbjct: 406 RHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTELL 465
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
HN RI +I +DG LE+ N S +D G+Y C ++ G+ ++ ++ +
Sbjct: 466 HNSSRI-----------SIWLDGS-LELLNISKSDEGKYTCFAENDRGRANSTGSLSI 511
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
+A G N+T+ C P P+ W+K ++ R + +G LL + + +D G+Y
Sbjct: 260 WALLGQNITLECFALGNPIPQIRWRKLDGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYE 318
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D K L V P + EQ+ + +E + YI +
Sbjct: 319 CEADNSKGKDWHKTHLYVEGAPDWLEQI-----------------SSSEVDIGGDYIMSC 361
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ L+ ++ + G + + F D+G Y+CV ++ G I + V
Sbjct: 362 QASGKPKPHVHFLKNGHMYMKGHEVRFSRLGFEDSGMYQCVAENRHGVIHANAELRV 418
>gi|431913513|gb|ELK15188.1| Contactin-3 [Pteropus alecto]
Length = 888
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 274/592 (46%), Gaps = 69/592 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W KDG + R +I ENG L I+ +S D+G++ C A N HG+ +S
Sbjct: 263 CRAGGKPTPSYRWLKDGAALALEERVQI-ENGALTIANLSVADAGMFQCVAENKHGLVQS 321
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V P+ P + ++ ++ L C A + LL + W NG R D
Sbjct: 322 SAELRVTE-PTRITVAPSDMDVSVGESVVLPCQARHDPLLRGTFTWYFNGARADAGD--- 377
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 191
+ + + G L+ I N +GEY CVV++ V +S+ + V G PG P V+V E+
Sbjct: 378 -DGAHFSASGDLM-IRNIQLKHSGEYVCVVQTAVESVSSAANLTVRGSPGPPENVKVEEI 435
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTW---FNVSEHVIGKEVDRYTGRKEASI 248
T+A + W +GA N P+T Y + ART ++ W V E + GK R +
Sbjct: 436 TDTTAQLSWREGADNRSPVTWYSVQARTPFSVGWQAATTVPEVIDGKT------RTATVV 489
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
E L PW YEF+V+A N++G GEPS PS +
Sbjct: 490 E--LRPWVEYEFRVVASNKIGGGEPSLPSEK----------------------------- 518
Query: 309 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
P+P E Q+ Y + +R T++ +T+ + V + S ++ YEVKV
Sbjct: 519 -PVPEELQSGEGFGYVVAFRPLGVTDW-IQTVVTSADTPRYVFKNESIVPFSLYEVKVGV 576
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
N+ G GP S V T+FSAE+ P AP V +R +++ I V+W + N G L+G+
Sbjct: 577 YNNRGEGPFSPVTTVFSAEEEPTAAPSRVSARSLSASEIRVSWGAVPWKLSN--GHLLGY 634
Query: 429 RIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
++YW + EE+A + A + GL+ + ++ V A+N+AG GP S T
Sbjct: 635 EVRYWSSGD-EESASTVTVAASETSATLGGLRSNLAHHAAVRAFNSAGAGPFSTTASATT 693
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV---RVWEVDQDMSRAND 545
+ P +PP + + + V ++W V + E + GYKV + D + R N+
Sbjct: 694 RKPPPSRPPGNI-VWNTTDSKVLLSWDRVRATEHESAVTGYKVFYRTSGQSDTHVLRTNE 752
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGE 593
T + + + D V + V A ++GGDG S P IT Q+ E
Sbjct: 753 TSVELLLPIREDCV---------LEVKATTDGGDGASSEQIRIPGITVQVVE 795
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 43 GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 102
G L + ++D+G Y C A N G + ++GRL P + + + + +A +L +
Sbjct: 204 GVLEVPDFQQEDAGSYECIAENSRGRNAARGRLTYYAKPHWVQPI-EDVELAVEDSLSWQ 262
Query: 103 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 162
C A + +Y W +G + L E + I+ G L I N S ADAG ++CV +
Sbjct: 263 CRAGGKPT--PSYRWLKDGAALA---LEE----RVQIENGALTIANLSVADAGMFQCVAE 313
Query: 163 STVGKISTKTTVIVEGP 179
+ G + + + V P
Sbjct: 314 NKHGLVQSSAELRVTEP 330
>gi|363738738|ref|XP_414434.3| PREDICTED: neural cell adhesion molecule L1-like protein [Gallus
gallus]
Length = 1213
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 289/599 (48%), Gaps = 55/599 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P W KD +I S R ++ +NG L I ++DSG Y+C A
Sbjct: 442 GYSAFLHCKIFASPAADVRWTKDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYACWAA 501
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNG 121
N G L + P + ++ L+C + + L ++ W +G
Sbjct: 502 NSVGKRAITANLDIRDATKIV-ITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDG 560
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ ++ ++ I +D L I+N D G Y CV +++ ++ KT +IV P
Sbjct: 561 YE---LSVSSIQDSRIVMDMDTLFISNVMLEDQGVYTCVASTSLDSVTAKTRLIVLDVPD 617
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDR 239
P +Q+ E S + W GA++ P+ I + W W +E+ R
Sbjct: 618 PPEDLQLSEHQNRSVRLSWKAGASHNSPVNESIIEFEESRWEPGRW---------QELAR 668
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G ++ + L P++ Y+F+V++ N +G +PS PS +Y TP P + P I
Sbjct: 669 APGNTTTTLLS-LAPYTNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEAS 727
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ + WEPL ++N P + YK+ WR++ +TE+ ET+K++ + + P+
Sbjct: 728 EPNEMVMKWEPLKPMERNGPGLEYKVSWRQQGVETEWNEETVKKH---SLTLRNTPT--- 781
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+KVQAIN++G GPE + T +S ED+P AP GV NST + V W I R
Sbjct: 782 FVPYEIKVQAINNLGAGPEPNITTGYSGEDIPDAAPSGVSVDIVNSTLVKVFWFGIP--R 839
Query: 419 ENIRGRLIGHRIKYW--------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+ +RG L G+++ +W K +PE+ + ++ RN+ +I GL+P +++ + V+
Sbjct: 840 DRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVG--DRNYGMIPGLEPFSEFRLAVL 897
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
AYN+ G+GPES + T P++ P + I + +V ++W P I GY
Sbjct: 898 AYNSKGDGPESAPVVFETPEGVPEQ-PHFLKILNFDKDSVTLSWGL--PKRANGHITGYV 954
Query: 531 VRVWEVDQ--------DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ +++ D+S AN T TL+ + DLSP +Y V A + G G+
Sbjct: 955 LQYQIINETHEIGPLMDISVANHT------TLNWRLTDLSPSTKYKFYVKACTAKGCGK 1007
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 77/210 (36%), Gaps = 33/210 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C P+P WK +G I S R +G L + + D+ +Y C A+N
Sbjct: 350 GENLLLLCEAIGNPEPTIQWKLNGMPIDSRTFRGRISDGELSLINLQLQDTAVYHCEASN 409
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYI 116
HG + + VL+ + P I + N L C DV
Sbjct: 410 KHGTLLASANVNVLN-------IAPLILTSDGENYAAVVGYSAFLHCKIFASPAADVR-- 460
Query: 117 WTHNG----VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
WT + + +LN+ G LEI D+G Y C ++VGK +
Sbjct: 461 WTKDDSIEPLSALRYELNK---------NGTLEIKETKKEDSGSYACWAANSVGKRAITA 511
Query: 173 TVIVEGPPGL---PGGVQVVEVHKTSATIQ 199
+ + + P QV++ H Q
Sbjct: 512 NLDIRDATKIVITPKNPQVLKSHSILLKCQ 541
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLL-ISPVSRDDSGIYSC 60
+GG + + C E P P W K + GS + K + G +L I VS D G Y C
Sbjct: 259 KGGVLQLECIAEGLPTPHLSWVK---VTGSLPKDKPVTDKFGKVLKIENVSAADEGTYQC 315
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
TA+N G + + + V P + ++ P + NL L C A + E + W
Sbjct: 316 TASNPVGRAKHEFHVHVEEPPRWIKE-PRGGVYSLGENLLLLCEAIGNPEPTIQ----WK 370
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ I + T I G L + N D Y C + G + V V
Sbjct: 371 LNGMPIDS------RTFRGRISDGELSLINLQLQDTAVYHCEASNKHGTLLASANVNV 422
>gi|326928135|ref|XP_003210238.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Meleagris gallopavo]
Length = 1225
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 169/599 (28%), Positives = 287/599 (47%), Gaps = 55/599 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P W KD +I S R ++ +NG L I ++DSG Y+C A
Sbjct: 454 GYSAFLHCEIFASPAADVRWTKDDSIEPLSALRYELNKNGTLEIKETKKEDSGSYACWAA 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNG 121
N G L + P + ++ L+C + + L ++ W +G
Sbjct: 514 NSVGKRAITANLDIRDATKIV-ITPKNPQVLKSHSILLKCQSEYDSHLKNSFKLSWRKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ ++ ++ I +D L I+N D G Y CV +++ ++ KT +IV P
Sbjct: 573 YE---LSVSSIQDSRIIMDMDTLFISNVMLEDQGIYTCVASTSLDSVTAKTRLIVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDR 239
P +Q+ E S + W GA + P+ I + W W +E+ R
Sbjct: 630 PPEDLQLSEHQNRSVRLSWKAGANHNSPVNESIIEFEESRWEPGRW---------QELAR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G ++ + L P++ Y+F+VI+ N +G +PS PS +Y TP P + P I
Sbjct: 681 APGNTTTTLLS-LAPYTNYQFRVISVNAVGRSQPSKPSLRYVTPPAAPDKNPENIRVEAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ + WEPL ++N P + YK+ WR++ +TE+ ET+K++ + + P+
Sbjct: 740 EPNEMVMKWEPLKSMERNGPGLEYKVSWRQRGVETEWNEETVKKH---SLTLRNTPT--- 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+KVQAIN++G GPE + T +S ED+P AP GV NST + V W I R
Sbjct: 794 FVPYEIKVQAINNLGAGPEPNITTGYSGEDIPDAAPSGVSVDIVNSTLVKVFWFGIP--R 851
Query: 419 ENIRGRLIGHRIKYW--------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+ +RG L G+++ +W K +PE+ + ++ RN+ +I GL P +++ + V+
Sbjct: 852 DRVRGHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVG--DRNYGMIPGLDPFSEFRLTVL 909
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
AYN+ G+GPES + T P++ P + I + +V ++W P I GY
Sbjct: 910 AYNSRGDGPESAPVVFETPEGVPEQ-PRFLKILNFDKDSVTLSWGL--PKRANGHITGYI 966
Query: 531 VRVWEVDQ--------DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ +++ D+S AN T TL ++DLSP +Y V A + G G+
Sbjct: 967 LQYQIINETHEIGPLMDISVANHT------TLSWRLMDLSPSTKYKFYVKACTAKGCGK 1019
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 132/609 (21%), Positives = 219/609 (35%), Gaps = 72/609 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C P+P WK +G I S R +G L ++ + D+ +Y C A+N
Sbjct: 362 GENLLLLCEAIGNPEPTIQWKLNGMPIDSRTFRGRISDGELSLTNLQLQDTAVYHCEASN 421
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYI 116
HG + + VL+ + P I + N L C DV
Sbjct: 422 KHGTLLASANVNVLN-------IAPLILTSDGENYAAVVGYSAFLHCEIFASPAADVR-- 472
Query: 117 WTHNG----VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
WT + + +LN+ G LEI D+G Y C ++VGK +
Sbjct: 473 WTKDDSIEPLSALRYELNK---------NGTLEIKETKKEDSGSYACWAANSVGKRAITA 523
Query: 173 TVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + + P QV++ H Q +H K + +W + +S
Sbjct: 524 NLDIRDATKIVITPKNPQVLKSHSILLKCQ-------SEYDSHLKNSFKLSWRKDGYELS 576
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
I ++ I NV++ + +A L + + P
Sbjct: 577 VSSI-QDSRIIMDMDTLFISNVMLEDQGI-YTCVASTSLDSVTAKTRLIVLDVP-----D 629
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
P + + + +SW+ N+P N F + + E + GN
Sbjct: 630 PPEDLQLSEHQNRSVRLSWK--AGANHNSPVNESIIEFEESRWEPGRWQELARAPGNTTT 687
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
++ + Y + V A+ P P VT +A P P+ + +
Sbjct: 688 TLLSLAPYTNYQFRVISVNAVGRSQPSKPSLRYVTPPAA---PDKNPENIRVEASEPNEM 744
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPE----ETAVYYLSRTTRNWALIVGLQPDT 463
+ W P++ + N G + +++ W++ E E V S T RN V
Sbjct: 745 VMKWEPLKSMERN--GPGLEYKVS-WRQRGVETEWNEETVKKHSLTLRNTPTFV------ 795
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A NN G GPE + P PS V + +N T V V W +
Sbjct: 796 PYEIKVQAINNLGAGPEPNITTGYSGEDIPDAAPSGVSVDIVNSTLVKVFWFGIPRDRVR 855
Query: 524 EPIIGYKVRVWEVDQ--DMSRAN---DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GYKV W+ D R + + VG+ I L P + + VLA+++ G
Sbjct: 856 GHLRGYKVSWWKTKSMLDGKRHHPEKHFLTFVGDRNYGMIPGLDPFSEFRLTVLAYNSRG 915
Query: 579 DGRMSSPAI 587
DG S+P +
Sbjct: 916 DGPESAPVV 924
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 65/180 (36%), Gaps = 23/180 (12%)
Query: 4 EGGNVTIFCNPEAAPKPKFVW-------KKDGNIIGSGGRRKIFENGNLLISPVSRDDSG 56
+GG + + C E P P W KD + G+ EN VS D G
Sbjct: 271 KGGVLQLECIAEGLPTPHLSWVKVTENLPKDKPVTDKFGKVLKIEN-------VSAADEG 323
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
Y CTA+N G + + + V P + ++ P + NL L C A +
Sbjct: 324 TYQCTASNPVGRAKHEFHVHVEEPPRWIKE-PRGGVYSLGENLLLLCEAIGNP--EPTIQ 380
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
W NG+ I + T I G L +TN D Y C + G + V V
Sbjct: 381 WKLNGMPIDS------RTFRGRISDGELSLTNLQLQDTAVYHCEASNKHGTLLASANVNV 434
>gi|134054436|emb|CAM73212.1| zgc:55318 [Danio rerio]
Length = 937
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 162/505 (32%), Positives = 239/505 (47%), Gaps = 38/505 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P A+PKP+ W+K+ + R + N L I SR D G Y C A N
Sbjct: 452 GKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAEN 511
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L+V P E P ++ + ++ L C + LDV+++W N
Sbjct: 512 QFGSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN---- 566
Query: 125 GNMDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKT 172
N LN + DGG E T +S AD AG+Y C +++ + +
Sbjct: 567 -NQPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
++V GPPG PG V V E+ ++AT+ W+ G N PIT Y + AR+ + W
Sbjct: 620 ELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QT 674
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + D TG E+++ L PW YEF+V+A N +G G+PS PS T P AP+
Sbjct: 675 VKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPA 734
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ GG G+ +L ISWEP+ E QN Y + +R N T E + + R
Sbjct: 735 NVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRV-NGTRGWKEKMVTSADSTTYKYR 793
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ T +EV+V N+ G GP SEVVT+FSAE P+ P V + +S+ I V W
Sbjct: 794 DETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWK 853
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P GR G+ + +WK+ EE + L+ GL +T+Y V V +
Sbjct: 854 P----PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGF 909
Query: 473 NNAGEGPESERYLERTYRKAPQKPP 497
N+AG S +L + R A +K P
Sbjct: 910 NSAG----SRGHLAQPSRSAQRKMP 930
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 26/244 (10%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + + E +P VAP V + ++W P+
Sbjct: 697 WVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEE 756
Query: 418 RENIRG--RLIGHRI---KYWKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+N G ++ R+ + WKE + + T Y T P T + V+V
Sbjct: 757 YQNGEGFGYIVAFRVNGTRGWKEKMVTSADSTTYKYRDET---------FPPLTPFEVRV 807
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YNN G+GP SE + P++PPS V ++ + + V W+ SP GY
Sbjct: 808 GVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWKPPSPGLGRPQ--GY 865
Query: 530 KVRVW-EVDQ-DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD-GRMSSPA 586
+V W +V+Q ++ + T+ GN + + L +Y + V F++ G G ++ P+
Sbjct: 866 EVSFWKDVEQEELGKKKRTL---GNETNMLLSGLDGNTQYLVSVKGFNSAGSRGHLAQPS 922
Query: 587 ITFQ 590
+ Q
Sbjct: 923 RSAQ 926
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + + R ++ NG L I + + DSG+Y C A N +G S
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMV-NGELTIHRLQQADSGMYQCIAENKYGAIYS 427
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ +++ L C ++ W N R+
Sbjct: 428 SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIM 485
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L + L I N+S +D G Y C ++ G T ++V+ P
Sbjct: 486 L------LRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEP 527
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 127/352 (36%), Gaps = 58/352 (16%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + +P+ + W + + + RR I E GNL I V D G Y
Sbjct: 167 EGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYV 226
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P + A ++L C A
Sbjct: 227 CQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNP 286
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + M N + + +LEI N D+G YEC ++T G +
Sbjct: 287 VPTITW---------RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTA 337
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + V P + ++ + ++W AT G+P Y+ + ST V
Sbjct: 338 FRGHLQVYTLPQWISMINDTQL-DSGEQLRWECRAT-GKPRPTYRWLRNGEPLSTQSRVE 395
Query: 230 ----EHVIGKEVDRYTGRKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
E I + +G + EN +S+ E K++A +P +N
Sbjct: 396 MVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILAS-----------APMFNN-- 442
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
P R+ GK D+S+ P K +I WR KND Q
Sbjct: 443 -----NPVRLIATVGK--DVSLECRPRASPKP-------RISWR-KNDRRLQ 479
>gi|326914464|ref|XP_003203545.1| PREDICTED: contactin-5-like, partial [Meleagris gallopavo]
Length = 779
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 179/579 (30%), Positives = 274/579 (47%), Gaps = 28/579 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R ++ N L+I V+ D+G+Y C A N +G +
Sbjct: 186 CKATGKPRPTYRWLKNGAPLWPQSRIEMV-NSVLMIRTVNISDAGMYQCLAENKYGTIYA 244
Query: 72 KGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P++ Q+ I I + + + C + W +
Sbjct: 245 SAELKILASAPTFPLNQMRKTIIITKGQEVVIECKPQASPKPTIT--WKKGDKALRESKR 302
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV 189
+E + + D L I N AG Y C V++ +S +T ++V GPPG PG V V
Sbjct: 303 SEACSQASSAD---LMIRNILLMHAGRYGCRVQTAADTVSDETELLVRGPPGPPGVVIVE 359
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
E+ T+AT+ W+ GA N PI+ Y + AR+ ++ W + D +G E+++
Sbjct: 360 EITDTTATLSWSPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDVISGDMESAMA 414
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L PW YEF+V+A N++G G+PS+PS T P P+ + G G+ +L I+WE
Sbjct: 415 VELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRHELVIAWE 474
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
P+ E QN Y + +R N T E + + + R S T +EVKV
Sbjct: 475 PVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKVGVY 533
Query: 370 NDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHR 429
N+ G GP S +V I SAE P AP V + + + I V W + I+E++ GR G
Sbjct: 534 NNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW---KHIKESL-GRPQGFE 589
Query: 430 IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489
I YWK+ EE A + + L+ GL+ +T Y++ V AYN AG GP S T
Sbjct: 590 IGYWKDMEQEEAAEKVKTAGNESSLLLTGLEGNTLYHLTVRAYNAAGYGPPSTAVRVATK 649
Query: 490 RKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
+ P + PS V I+ + + V + W V P E ++GYKV + + Q +N +I
Sbjct: 650 KSPPSQAPSNVMWIQ--DGSHVSLGWEPVRPLANESEVMGYKVLLRQEGQ----SNSQVI 703
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
T + +V L Y + V A S GGDG +SP I
Sbjct: 704 ETQKT--SAVVILPDVGVYIIEVCAVSEGGDG-TASPQI 739
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 15/181 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P WKK +G+ RK L I V +D+G+Y C
Sbjct: 87 AARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRK--SQAVLEIPNVQLEDAGMYEC 144
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L V P + E+L + + L+ C A + Y W N
Sbjct: 145 KAENSRGRNVFRGQLQVYTYPQWVEKL-NDTELDSGEQLRWECKATGKP--RPTYRWLKN 201
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + I + +L I + +DAG Y+C+ ++ G I S + ++
Sbjct: 202 GAPLWPQS-------RIEMVNSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASA 254
Query: 179 P 179
P
Sbjct: 255 P 255
>gi|296211445|ref|XP_002752419.1| PREDICTED: contactin-1 [Callithrix jacchus]
Length = 975
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 280/592 (47%), Gaps = 72/592 (12%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ I RN L
Sbjct: 486 AENNRGKANSTGTLVITXXXXX------XXXIHYQRNFML-------------------- 519
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D N G L I NA AG Y C ++ V S ++V GPPG
Sbjct: 520 ------DSN-----------GELLIRNAQLRHAGRYTCTAQTIVDNSSASADLVVRGPPG 562
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 563 PPGGLRIEDIRATSVGLTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE----- 617
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 618 GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNKIKTDGAAPNVAPSDVGGGGGRN 677
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 678 RELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPSTA 736
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
++VKV+A N+ G GP S V I SAED P AP V + +S+ I+V W E + E I
Sbjct: 737 FQVKVKAFNNKGDGPYSLVAVINSAEDAPSEAPTEVGVKVLSSSEISVHW---EHVLEKI 793
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ ++I+YW + E A + L T++ + A + L PDT+Y+++V A N+AG GP
Sbjct: 794 ---VESYQIRYWATHD-REVAAHRLQLTSQEYSARLENLLPDTQYFIEVRACNSAGCGPP 849
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 850 SDMIEAFTKKAPPSQPPRI--ISSVRSGSHYIITWDHVVALSNESTVTGYKVLYRPDGQH 907
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 908 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 950
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 SYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTHGAI 400
>gi|350644557|emb|CCD60720.1| septate junction protein [Schistosoma mansoni]
Length = 1161
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 281/625 (44%), Gaps = 50/625 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIY 58
G + C PE AP W DG ++ + NG++ + P R D +
Sbjct: 549 GSTAVMECQPEGAPAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVL 608
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C N M + +L + Y P +C ++ D + T
Sbjct: 609 LCD--NAQAMQSALNQLAI-SVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLT 654
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ R +L +L P N G L+I N F ++G Y C ++ + S+ + + G
Sbjct: 655 LDDAR--RYELAQLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAG 711
Query: 179 PPGLPGGVQVVEVHK--TSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI- 233
PPG GGV VV+ H + W G ++ I +++I A ++ + W ++ +V
Sbjct: 712 PPGPCGGV-VVDPHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSI 770
Query: 234 -GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
++ + + R+ + N L Y +V AGN LG GEPS PS + T KP P
Sbjct: 771 SSTKLLKPSDRRMTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQ 829
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVG 347
+ GGGGK G L W PL R +N PN +Y+ + K + E+ + + + G
Sbjct: 830 NVTGGGGKHGTLVFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFM 889
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + +Y Y+V VQA+N G GP SE VT+ SA +P AP GV + FN ++I
Sbjct: 890 QYTLTLGDNLFYKPYDVMVQAVNSEGAGPLSEPVTVMSATRVPTNAPSGVTAGAFNCSSI 949
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNP-----EETAVYYL-SRTTRNW----ALIV 457
V W P L E G G+RI YW + + A + L R T + LI+
Sbjct: 950 RVWWYP-PLPSEG-EGPTWGYRILYWPRISDCRSLESDRARHQLGQRQTVHGDVTEGLII 1007
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWRY 516
GL DT Y + V +N+AG+GPES + T++ AP++ P+ V + P T+ V+W
Sbjct: 1008 GLDADTYYCIAVQIFNSAGDGPESSFTEQTTFKTAPREFPTMVTLNATGIPNTIRVSWVG 1067
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ EE + GY +R W R I VG + DL RY++RV +S
Sbjct: 1068 IQARPNEESVEGYCIRYWPTGSQFKRTFKD-INVGLQTFGYVSDLKTDVRYNLRVYGYSR 1126
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGS 601
GG G MSSP FQ+ +++ G+
Sbjct: 1127 GGVGTMSSPVNQFQIITKEKCIPGA 1151
>gi|256089229|ref|XP_002580716.1| contactin; neuroglian; septate junction protein [Schistosoma mansoni]
Length = 1163
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 279/625 (44%), Gaps = 50/625 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR------DDSGIY 58
G + C PE AP W DG ++ + NG++ + P R D +
Sbjct: 551 GSTAVMECQPEGAPAMTVEWLHDGTVLTTSDTLMNVSNGDVDLLPGERLVDLEYADDIVL 610
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C N M + +L + Y P +C ++ D + T
Sbjct: 611 LCD--NAQAMQSALNQLAI-SVRRYGMCFAPS-----------KCKVLLQDWQDSHPVLT 656
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ R +L +L P N G L+I N F ++G Y C ++ + S+ + + G
Sbjct: 657 LDDAR--RYELAQLYRPYGNY-FGTLKIVNVQFENSGNYTCAAETPLNSQSSSGVIRIAG 713
Query: 179 PPGLPGGVQVVEVHK--TSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVI- 233
PPG GGV VV+ H + W G ++ I +++I A ++ + W ++ +V
Sbjct: 714 PPGPCGGV-VVDPHVGVDRVNVSWAVGTSHLFQILYFQIEANAMYDPPNQWMIMASNVSI 772
Query: 234 -GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
++ + + R+ + N L Y +V AGN LG GEPS PS + T KP P
Sbjct: 773 SSTKLLKPSDRRMTVVRN-LAANMAYRIRVRAGNALGLGEPSPPSLSFTTLPTKPTLIPQ 831
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-----SETLKEYGNVG 347
+ GGGGK G L W PL R +N PN +Y+ + K + E+ + + + G
Sbjct: 832 NVTGGGGKHGTLVFKWIPLKRVNENGPNFHYRAHIKAKENAEYSIHDLWTAKMSDDGKFM 891
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + +Y Y+V VQA+N G GP SE VT+ SA +P AP GV + FN ++I
Sbjct: 892 QYTLTLGDNLFYKPYDVMVQAVNSEGAGPLSEPVTVMSATRVPTNAPSGVTAGAFNCSSI 951
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNP-----EETAVYYLSRTTR-----NWALIV 457
V W P L E G G+RI YW + + A + L + LI+
Sbjct: 952 RVWWYP-PLPSEG-EGPTWGYRILYWPRISDCRSLESDRARHQLGQRQTVHGDVTEGLII 1009
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWRY 516
GL DT Y + V +N+AG+GPES + T++ AP++ P+ V + P T+ V+W
Sbjct: 1010 GLDADTYYCIAVQIFNSAGDGPESSFTEQTTFKTAPREFPTMVTLNATGIPNTIRVSWVG 1069
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ EE + GY +R W R I VG + DL RY++RV +S
Sbjct: 1070 IQARPNEESVEGYCIRYWPTGSQFKRTFKD-INVGLQTFGYVSDLKTDVRYNLRVYGYSR 1128
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGS 601
GG G MSSP FQ+ +++ G+
Sbjct: 1129 GGVGTMSSPVNQFQIITKEKCIPGA 1153
>gi|432114566|gb|ELK36414.1| Contactin-1 [Myotis davidii]
Length = 1034
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 281/596 (47%), Gaps = 63/596 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIY 58
A +GG V I C P+AAPKPKF W K + +G GR LLI +SR Y
Sbjct: 336 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNGSSPGRV------TLLIRAMSR-----Y 384
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+ T R+I+ P + N ++C+A + LD+ ++W+
Sbjct: 385 TKDPT----------RIILA---------PLNADVTVGENATMQCAASFDPALDLTFVWS 425
Query: 119 HNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
NG I N N +D G L I NA AG Y C ++ V S ++V
Sbjct: 426 FNGYVIDFNKENIHYRRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVR 485
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
GPPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 486 GPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE- 544
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGG
Sbjct: 545 ----GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIRTDGAAPNVAPSDVGGG 600
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L+I+W PL RE N Y + ++ + E++ T+ ++G V + +
Sbjct: 601 GGSNRELTITWAPLSREYHYGNNFGYVVAFKPFDGEEWKKVTVTN-PDIGRYVHKDETMR 659
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T ++VKV+A N+ G GP S + I SA+D P AP GV + +S+ I+V W
Sbjct: 660 PFTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTGVGVKVLSSSEISVHW------ 713
Query: 418 RENIRGRLI-GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
E++ +++ ++I+YW + E A + A + L PDT+Y V V A N+AG
Sbjct: 714 -EHVVDKIVESYQIRYWSAHDKEAAAHRVQVNSQEYSARLENLLPDTQYSVDVRACNSAG 772
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW- 534
GP SE T + P +PP I I + + +TW +V E + GYKV
Sbjct: 773 CGPPSEMIETFTKKAPPSQPPRI--ISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRP 830
Query: 535 --EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 831 DGQHDGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 877
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 30/175 (17%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 159 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 210
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G Y C A N+ G D +GR+ V P + E + + +L C A + + +
Sbjct: 211 DEGTYECEAENIKGKDRHQGRIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 269
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG E L + + +F +AG Y+C+ ++T G I
Sbjct: 270 R--WLKNGYVYHQYHKGE------------LRLYDVTFENAGMYQCIAENTYGAI 310
>gi|410918977|ref|XP_003972961.1| PREDICTED: contactin-1a-like [Takifugu rubripes]
Length = 1040
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/526 (28%), Positives = 244/526 (46%), Gaps = 22/526 (4%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
G V I C P AAP+P+F W K ++ + R I +G+L I +++D G+Y+C A N
Sbjct: 431 GRVVIECKPRAAPRPQFRWMKGKELLFNNSRISILFDGSLEIRDATKNDEGVYTCFAENS 490
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G S G L + S P + + LRC+A + +LD+ +IW + R+
Sbjct: 491 RGKANSSGYLTITEATS-ITVAPEDSQVKVGEEVVLRCAASFDPMLDITFIWAID-FRVI 548
Query: 126 NMDLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + D G L I NA G Y C ++ V + V G PG P
Sbjct: 549 DFDSEWQHYERLWRDDGSGDLRIKNAQIWHEGRYTCTAQTVVDSDVAYADLKVVGMPGPP 608
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEH--VIGKEVD 238
G ++V E+ T ++WT GA + PI +Y I R W W N S + V+
Sbjct: 609 GVIRVEEIGNTGVKLRWTKGADHNSPILYYTIQTRHYWALNEDDWRNASTSPAFLDGNVE 668
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R A + ++ PW Y+F++IA NE G GE S PS + T P +P+ + G G
Sbjct: 669 R------AEVTDIY-PWLEYQFRIIATNEHGSGEASIPSLKIKTWDAAPVVSPTNVAGYG 721
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVRI 353
G+ G++ I+W P+ + Y + ++ N ++ ET+ + Y + +
Sbjct: 722 GRNGEIVITWTPVEPWHFYGKSFGYIVAFKPHNAYDWWFETISDPETRRYVHRDSYFIPT 781
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+F E++VK+++ N G GP S I+ D+P P V++R +ST V W P
Sbjct: 782 EEDFQVREFQVKIKSFNVKGDGPYSLTQVIYYPRDVPTEPPTDVYARPVSSTEALVWWLP 841
Query: 414 IELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ +++ + G+++KYW++ D+PE A T N + + PD Y ++V A+
Sbjct: 842 VVDTGTSLQQYIEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDAHYLIEVRAF 901
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
N AG GP E T R P +PP ++V W ++
Sbjct: 902 NGAGLGPPGEHCEMFTKRAPPPEPPRMWRYISWTGKWLYVWWDHIQ 947
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 126/604 (20%), Positives = 226/604 (37%), Gaps = 70/604 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ C P P W KDG + G G L S ++ DSG+Y C A N
Sbjct: 346 GSAHSMRCVAMGKPFPFIRWYKDGYMYG---------KGELKFSSLTFTDSGMYQCIAEN 396
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + L V+ +E P K + R+ ++ + W
Sbjct: 397 SWGIKYANAELRVIACAPTFEFNPVKKQLLGARDGRVVIECKPRAAPRPQFRW------- 449
Query: 125 GNMDLNELETPNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
M EL N I G LEI +A+ D G Y C +++ GK ++ + +
Sbjct: 450 --MKGKELLFNNSRISILFDGSLEIRDATKNDEGVYTCFAENSRGKANSSGYLTITEATS 507
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
+ + +V + A + P+ I ++ F+ SE + + R
Sbjct: 508 ITVAPEDSQVKVGEEVV--LRCAASFDPMLDITFIWAIDFRVIDFD-SEWQHYERLWRDD 564
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG--- 298
G + I+N + W + A Q +D Y +G G
Sbjct: 565 GSGDLRIKNAQI-WHEGRYTCTA--------------QTVVDSDVAYADLKVVGMPGPPG 609
Query: 299 ----GKIGDLSISWEPLPREKQNAPNIYYKI----FWRKKNDTEFQSETLKEYGNVGIAV 350
+IG+ + N+P +YY I +W D + T + + +
Sbjct: 610 VIRVEEIGNTGVKLRWTKGADHNSPILYYTIQTRHYWALNEDDWRNASTSPAFLDGNVER 669
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + EY+ ++ A N+ G G S + I + + P V+P V G + I +
Sbjct: 670 AEVTDIYPWLEYQFRIIATNEHGSGEASIPSLKIKTWDAAPVVSPTNVAGYGGRNGEIVI 729
Query: 410 TWNPIELIRENIRGRLIGHRIKY--------WKEDNPEETAVYYLSRTTRNWALIVGLQP 461
TW P+E + G+ G+ + + W E + Y+ R + + +
Sbjct: 730 TWTPVEPW--HFYGKSFGYIVAFKPHNAYDWWFETISDPETRRYVHRDS----YFIPTEE 783
Query: 462 DTK---YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV- 517
D + + VK+ ++N G+GP S + R P +PP+ V+ + ++ T V W V
Sbjct: 784 DFQVREFQVKIKSFNVKGDGPYSLTQVIYYPRDVPTEPPTDVYARPVSSTEALVWWLPVV 843
Query: 518 -SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ + ++ I GY+V+ W D + I + ++ P Y + V AF+
Sbjct: 844 DTGTSLQQYIEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDAHYLIEVRAFNG 903
Query: 577 GGDG 580
G G
Sbjct: 904 AGLG 907
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 23/208 (11%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G +++ C A P + W++ GN ++ GNL+I+ + +G+Y C
Sbjct: 56 GRISMNCRARANPPASYRWRR-GNWEIKLMEQPDEHYSLVGGNLVINNPKKKHAGVYICV 114
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N++G SK Y E+ P + + + + L C+ +V Y W
Sbjct: 115 ARNIYGTVISKEAQFKF---GYLEEFPQEERDPVHVKEGQGAVLLCAPPNAWPEEVTYRW 171
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS-TVGK------IST 170
N + LN ++ G L I+ DAG Y C V S +G+ IS
Sbjct: 172 IFNEFPVF---LNTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPMIGRSVFSKFISL 228
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATI 198
V EG P ++ V+ T+A +
Sbjct: 229 IPLVPEEGERKYPADIR-VKFQDTTAML 255
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 99/269 (36%), Gaps = 38/269 (14%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGN---IIGSGGRRKIF--ENGNLLISPVSRDDS 55
+ EG + C P A + ++ N + + RR+ + GNL IS V D+
Sbjct: 146 HVKEGQGAVLLCAPPNAWPEEVTYRWIFNEFPVFLNTDRRRFVSQKTGNLYISKVEAQDA 205
Query: 56 GIYSCTATNV---HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
G YSC ++ + LI L + P I + + S T E
Sbjct: 206 GNYSCFVSSPMIGRSVFSKFISLIPLVPEEGERKYPADIRVKFQDTTAMLASNITLECFA 265
Query: 113 VAYIWTHNGVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ H R +D +L PN I+ G +L + N + D G YEC +T GK
Sbjct: 266 LGNPIPHIVWR--KVDATDL-PPNHEISESGAMLHLYNVQYDDVGGYECEAINTKGKDWH 322
Query: 171 KTTVIVEGPP-------------GLPGGVQVVEVHKTSATIQW-TDGATNGR------PI 210
K V VE P G ++ V + K I+W DG G+ +
Sbjct: 323 KAWVYVESAPEWAETINNTQIDIGSAHSMRCVAMGKPFPFIRWYKDGYMYGKGELKFSSL 382
Query: 211 TH-----YKIIARTNWNSTWFNVSEHVIG 234
T Y+ IA +W + N VI
Sbjct: 383 TFTDSGMYQCIAENSWGIKYANAELRVIA 411
>gi|47228828|emb|CAG07560.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1049
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 275/611 (45%), Gaps = 46/611 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+A P +WKK I R + +G L ++ VS+ D+G Y+C
Sbjct: 451 AKAGTTVTLECKPQAYPVASILWKKGNLPIHINDRITLSSDGTLRLANVSKSDAGGYTCF 510
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N GM + GRL+V P+ Q P + I ++ L C ++ +LDV++ W NG
Sbjct: 511 ARNRFGMSSTTGRLLVTD-PTRITQGPADMEIIVGESIVLPCQVASDPVLDVSFSWAFNG 569
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I D E G L+ I N AG+Y CVV + V +S +IV+GPP
Sbjct: 570 QLIAKGD-GHFELVGGRTAGDLM-IRNIQLYHAGKYICVVDTDVESLSAVAILIVKGPPS 627
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V V EV ++A + W+ G NG PI +Y + RT + W V + + + +D
Sbjct: 628 PPDSVTVEEVTDSTAQLAWSRGRDNGSPIVNYFVQTRTPFTVGWQRV--NTVPEIID--- 682
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP------------------ 283
G + L W YEF+V+A N +G GEPS S + T
Sbjct: 683 GNTLTATVVDLNAWVEYEFRVLARNSVGVGEPSPVSVRTRTEDAGTCEQTVCCYRRWLSR 742
Query: 284 ---------ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 334
P AP +GGGGG +L I+WEP+P E QN + Y I +R +
Sbjct: 743 MLRRERALCCAVPDAAPGDVGGGGGSRSELVITWEPVPEELQNGESFGYIIAFRAFGEVS 802
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
+ G V R S ++ + VKV N G GP S VVTI+SAE P P
Sbjct: 803 WTHVATSAPG-ASRYVYRNDSIAPFSPFHVKVGTYNSKGQGPFSPVVTIYSAEIEPSGMP 861
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
GV++R +++ I V W + E R++G+ + YW++D ET +
Sbjct: 862 AGVWARSVSASEIEVNWQALSYSPE----RVLGYEVVYWEDDTKPETMGKVRVPWNQTAV 917
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL +T++++ V A+N AG GP T + P +PP V I + + + W
Sbjct: 918 TVSGLAGNTQFFLTVSAFNTAGTGPFLPSINVTTKKAPPAQPPMNVEWTLIG-SQLSLYW 976
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
V + E + GY++ + + T+ +T A++ + Y +R+
Sbjct: 977 EPVVATESESEVTGYQL---SYRRQRHKEVSTLTTTNST--AELTLPEEEEDYVIRIQTL 1031
Query: 575 SNGGDGRMSSP 585
S GG G S P
Sbjct: 1032 SEGGLGPASEP 1042
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 11/186 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P P+ WK+ + + + N L I +DD+G Y C
Sbjct: 269 AARGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYECV 328
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + + GRL P + + + +A L C A+ + +Y W NG
Sbjct: 329 AENRMGKNMATGRLAFYAKPQWIQAV-KDTALAIEERLHWECRANGKP--KPSYAWLKNG 385
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180
++ + D I ++ G+L + + +DAG Y+CV ++ G I +++ PP
Sbjct: 386 QQLLSGD-------RITVEDGVLSVPALALSDAGMYQCVAENKHGVIYFVAELMVLASPP 438
Query: 181 GLPGGV 186
G +
Sbjct: 439 DFTGNL 444
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 24 WKKDGNIIGSG-GRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDES-KGRLIVLHG 80
W +G +I G RR+ GNL+IS + R D G+Y C A N G S + L +
Sbjct: 92 WSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAFNTAGAILSRRASLQFAYL 151
Query: 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG----VRIGNMDLNELETPN 136
+ +++ + + L C T D+AY W N V+ N +T N
Sbjct: 152 DHFKVHTRSAVSVREGQGVVLLCGTPTSS-GDLAYAWVFNEYPYFVQQDNRRFVSQQTGN 210
Query: 137 INIDGGLLEITNASFADAGEYECVVKSTV--GKISTKTTVIVEGPPGLPG 184
L I +D G Y CVV ++V GK+ + T ++ G+ G
Sbjct: 211 -------LYIAKVEPSDVGNYTCVVTNSVTKGKVQSSPTALILRTDGMMG 253
>gi|350591366|ref|XP_003132378.3| PREDICTED: contactin-6 [Sus scrofa]
Length = 588
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 240/502 (47%), Gaps = 27/502 (5%)
Query: 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 144
P K+ + ++ L C + ++V ++W+ NG I DL + I G G L
Sbjct: 65 PSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGDVI---DLKKGVAHFERIGGESVGDL 121
Query: 145 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 204
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G+
Sbjct: 122 MIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGS 181
Query: 205 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 264
N PI + I ART ++ W VS + G + L PW YEF+V+A
Sbjct: 182 DNNSPIQIFSIQARTPFSVGWQAVS-----TVPEILNGLTYNATVVGLNPWVEYEFRVVA 236
Query: 265 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 324
GN +G GEPS PS T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 237 GNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYI 296
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
I R T + + + V R S + +EVKV N+ G G S ++
Sbjct: 297 IMLRPVGSTTWTKARVPSVESSRF-VYRNESIIPLSPFEVKVGVYNNEGEGALSTASIVY 355
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--- 441
S ED PQ+AP+G + F+++ + V+WN I R GR++G+ I YW +D+ E
Sbjct: 356 SGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT--GRVLGYEILYWTDDSKESMIGK 413
Query: 442 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 501
+ TT+N I GL+ +T Y+ V AYN AG GP S T + P +PP+ +
Sbjct: 414 VRVSGNVTTKN---ITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIA 470
Query: 502 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDL 561
K N + + + W +V E ++GYK+ + Q + I+ NT +V
Sbjct: 471 WKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQSQTH----ILETNNTSAELLVPF 525
Query: 562 SPGKRYHMRVLAFSNGGDGRMS 583
+ Y + + S+GGDG S
Sbjct: 526 E--EDYLIEIRTVSDGGDGSSS 545
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 15/234 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP + G + + + +TW P E
Sbjct: 227 WVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEE 286
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G +I R + K P + ++ RN ++I P + + VKV
Sbjct: 287 LQNGEEFGYIIMLRPVGSTTWTKARVPSVESSRFV---YRNESII----PLSPFEVKVGV 339
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YNN GEG S + + PQ P ++ + + + V+W ++ + ++GY++
Sbjct: 340 YNNEGEGALSTASIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEI 399
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
W D S + GN +I L Y V A++ G G S P
Sbjct: 400 LYWTDDSKESMIGKVRVS-GNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPP 452
>gi|41323984|gb|AAS00058.1| contactin [Carassius auratus]
Length = 1029
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 252/541 (46%), Gaps = 30/541 (5%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E G V I C P AAPKPKF+WK+ ++ + R I+++G+L I VS+ D G Y+C A
Sbjct: 429 AEKGRVVIECKPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNVSKSDEGSYTCYA 488
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ-------LRCSAHTEELLDVAY 115
N G S G L + KIT+A L+CSA + LD+ +
Sbjct: 489 ENDRGKSNSTGTLTITEA--------TKITVAPSDTEAVVGDTAILQCSASFDPSLDITF 540
Query: 116 IWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
IWT + I D E + + G L I N AG Y C ++ V + + V
Sbjct: 541 IWTVDSYVINFYTDFEHYELLMGHENRGDLLIKNIQVRHAGHYSCTAQTIVDNATAEADV 600
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEH 231
V G PG PGGV+V E+ TS ++W+ G+ +G + + + R + W S
Sbjct: 601 SVRGLPGPPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTS 660
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + G E++ L PW YEF+V A NE G GE S PS + T +P AP
Sbjct: 661 PVFLD-----GSAESATVLDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAP 715
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G G+L ++W P+ + Y + +++ D E++ T+++ +
Sbjct: 716 SDVIGQVGISGELIVTWTPVKPQFFFGKKFGYTVAFKQHEDYEWKWSTVEDPETR--RYI 773
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
S TE +VKV N+ G GP S + ++S P AP V++R ST V W
Sbjct: 774 YKESMTPDTEIQVKVSTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTSTEALVWW 833
Query: 412 NPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
P+ N + G++I+YW++ D+ E A + T N + ++PD+ Y ++V
Sbjct: 834 LPVYQAPPNW---VDGYQIRYWRKYDDNEAAASRVIVHRTINQTRLENMRPDSHYLIEVR 890
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A+N AG GP SE T R P + N +++ W ++ + E + GYK
Sbjct: 891 AFNGAGLGPPSEHCEMFTRRPPPSRLLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYK 950
Query: 531 V 531
+
Sbjct: 951 I 951
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 138/596 (23%), Positives = 229/596 (38%), Gaps = 64/596 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C P P W KDG G G L S ++ +DSG+Y C A N
Sbjct: 347 GSELTLRCVAVGKPLPWIRWLKDGYSYG---------KGELKFSSLTFEDSGMYQCVAEN 397
Query: 65 VHGMDESKGRL-IVLHGPSYYEQLPPKITIAAHR-NLQLRCSAHTEELLDVAYIWTHNGV 122
G + L +V P++ K+ + A + + + C +IW
Sbjct: 398 EWGTIYASAELRVVSCAPTFIYNPVKKVLLGAEKGRVVIECKPRAAP--KPKFIWKRGSE 455
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-------TKTTVI 175
+ N + + D G LEI N S +D G Y C ++ GK + T+ T I
Sbjct: 456 LLTN------SSRMLIWDDGSLEILNVSKSDEGSYTCYAENDRGKSNSTGTLTITEATKI 509
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P V + + SA+ + T + Y I T+ F E ++G
Sbjct: 510 TVAPSDTEAVVGDTAILQCSASFDPSLDITFIWTVDSYVINFYTD-----FEHYELLMGH 564
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
E R + I+N+ V G+ ++ + N A+ G
Sbjct: 565 E-----NRGDLLIKNIQV------------RHAGHYSCTAQTIVDNATAEADVSVRGLPG 607
Query: 296 GGGG----KIGDLSISWEPLPREKQNAPNIYYKI----FWRKKNDTEFQSETLKEYGNVG 347
GG +IGD S+ + I + + F+ + + T + +
Sbjct: 608 PPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTSPVFLDGS 667
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + +YE +V AIN+ G G S + I + + P VAP V + S
Sbjct: 668 AESATVLDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGISGE 727
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ VTW P++ + G+ G+ + + + ++ E TR + + PDT+
Sbjct: 728 LIVTWTPVK--PQFFFGKKFGYTVAFKQHEDYEWKWSTVEDPETRRYIYKESMTPDTEIQ 785
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP- 525
VKV YNN GEGP S + + R AP + P V+ + + T V W P ++ P
Sbjct: 786 VKVSTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTSTEALVWWL---PVYQAPPN 842
Query: 526 -IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY++R W D A +I + ++ P Y + V AF+ G G
Sbjct: 843 WVDGYQIRYWRKYDDNEAAASRVIVHRTINQTRLENMRPDSHYLIEVRAFNGAGLG 898
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 143/609 (23%), Positives = 234/609 (38%), Gaps = 76/609 (12%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIY 58
YA N+T+ C P P W+K D ++ + ++ NG LL + V +D G Y
Sbjct: 254 YALVHQNITLECFALGNPLPHIRWRKLDADLPPN---YEVSMNGALLHLINVQYEDEGSY 310
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C NV GMD + L V P + E + L LRC A + L + W
Sbjct: 311 ECETLNVKGMDWYRQWLYVEGAPEWAEHI-NDTEKDVGSELTLRCVAVGKPLPWIR--WL 367
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIV 176
+G G G L+ ++ +F D+G Y+CV ++ G I S + V+
Sbjct: 368 KDGYSYGK---------------GELKFSSLTFEDSGMYQCVAENEWGTIYASAELRVVS 412
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P + V+ V + GA GR + K A W SE +
Sbjct: 413 CAPTFIYNPVKKVLL-----------GAEKGRVVIECKPRAAPKPKFIWKRGSELLTNS- 460
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R + S+E + V S E E G+ +S T A K APS
Sbjct: 461 -SRMLIWDDGSLEILNVSKSD-EGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDT-- 516
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-----DTEFQS-ETLKEYGNVGIAV 350
+GD +I L P++ W + T+F+ E L + N G +
Sbjct: 517 -EAVVGDTAI----LQCSASFDPSLDITFIWTVDSYVINFYTDFEHYELLMGHENRGDLL 571
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ + Y Q I D E++V S +P P GV T++ +
Sbjct: 572 IKNIQVRHAGHYSCTAQTIVDNATA-EADV----SVRGLPG-PPGGVRVEEIGDTSVKLR 625
Query: 411 WNPIELIRENIRGRLIGHRIK---YWKEDNPEE-----TAVYYLSRTTRNWALIVGLQPD 462
W+ + + LI H ++ ++ D PE+ T+ +L + + A ++ L P
Sbjct: 626 WS----LGSDHGSSLIQHVVQTRDFYALD-PEDWKTASTSPVFLDGSAES-ATVLDLYPW 679
Query: 463 TKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPS 520
+Y +V A N G G S ++ +T+ P PS V + GI+ + VTW V P
Sbjct: 680 MQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGISGELI-VTWTPVKPQ 738
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
F GY V ++ +D T+ ++P ++V ++N G+G
Sbjct: 739 FFFGKKFGYTV-AFKQHEDYEWKWSTVEDPETRRYIYKESMTPDTEIQVKVSTYNNKGEG 797
Query: 581 RMSSPAITF 589
S ++ +
Sbjct: 798 PSSLISVVY 806
>gi|345326812|ref|XP_001505304.2| PREDICTED: neural cell adhesion molecule L1-like protein
[Ornithorhynchus anatinus]
Length = 1092
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 280/591 (47%), Gaps = 39/591 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTAT 63
G + + C ++P + +W+++ ++ GG R +ENG L I +++DSG Y+C T
Sbjct: 392 GYSAFLHCGVFSSPPAEIIWQREDSVTPLGGPRFFKYENGTLEIKQTTKEDSGSYNCLVT 451
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + LP + L L+C + L + WT +G
Sbjct: 452 NSKGKTGVTAYL-AIRDATKLRVLPKNPKVLKSHLLVLQCQIELDSHLKHSLKLSWTKDG 510
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++ N E I I+ L I+N + D G Y C+ +++ + + VI+ P
Sbjct: 511 ---NELESNGTEGDRIMIEMNTLSISNVTLEDEGVYSCLASTSLDSVKADSHVIILDVPD 567
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDR 239
P + + E S + W G ++ I + I N + W +E+
Sbjct: 568 SPDNLHLSEKQNRSVRLTWKAGNSHNSIINEFIIEYEGNKEDSEKW---------EELIT 618
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E ++ L P+ Y+F+VIA N +G +PS PS + TP P + P I
Sbjct: 619 VPGN-ETTVILSLAPYVKYKFRVIAVNSVGRSQPSKPSEHHETPPAAPDKNPENIRVDAS 677
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ + WEPL +QN P + Y++ WR++ +T++ ET+K++ V+ + +
Sbjct: 678 EPNEMIMKWEPLKPMEQNGPGLEYRVSWRRQGVETDWNEETVKKH------VLVLKNTPT 731
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ Y++KVQAIN G GPE +V T +S ED P AP V NST IN TW+ I R
Sbjct: 732 FAPYDIKVQAINQFGSGPEPQVATGYSGEDYPDAAPLNVAVNIINSTLINATWSKIP--R 789
Query: 419 ENIRGRLIGHRIKYWK------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
E + G L G++I +WK E + + + R+ ++ GL+P +++++ V+A+
Sbjct: 790 ERVHGHLKGYKISWWKTKSLLDERKHRQEKHFLVFWGDRDHGMVPGLEPYSEFHLSVLAF 849
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N+ G GPES + +T P++ P+ + I + V ++W P + GY ++
Sbjct: 850 NSKGSGPESSPIIFQTPEGVPEQ-PTFLRILNFDKNAVTLSWGL--PKKANGRLSGYVLQ 906
Query: 533 VWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+++ ++ ND I +TL + DL+ +Y + A ++ G G+
Sbjct: 907 YQIINETYEVGALNDINITNPSTLSLRLSDLNSTTKYKFYLRACTSNGCGK 957
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 134/614 (21%), Positives = 234/614 (38%), Gaps = 70/614 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG-----NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
G N + C P+P+ WK++G N++ SG +IF L++ + D S +Y
Sbjct: 299 GSNAILRCEASGNPRPEIKWKRNGLPVNKNLVSSG---QIFPREISLVN-LQLDQSAVYQ 354
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-------NLQLRCSAHTEELLD 112
C A+N HG + + VL + +P +T+ + L C + +
Sbjct: 355 CEASNKHGTILANANVDVL------DIIPVMLTLDGENYAAVIGYSAFLHCGVFSSPPAE 408
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + + +G + E G LEI + D+G Y C+V ++ GK
Sbjct: 409 IIWQREDSVTPLGGPRFFKYE-------NGTLEIKQTTKEDSGSYNCLVTNSKGKTGVTA 461
Query: 173 TVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + L P +V++ H Q + H K + +W +
Sbjct: 462 YLAIRDATKLRVLPKNPKVLKSHLLVLQCQIELDS-------HLKHSLKLSWTKDGNELE 514
Query: 230 EHVIGKEVDR-YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ G E DR SI NV + + +A L + S + P
Sbjct: 515 SN--GTEGDRIMIEMNTLSISNVTLE-DEGVYSCLASTSLDSVKADSHVIILDVP----- 566
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
+P + + + ++W+ + N + + K D+E E + GN
Sbjct: 567 DSPDNLHLSEKQNRSVRLTWK-AGNSHNSIINEFIIEYEGNKEDSEKWEELITVPGNETT 625
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
++ + Y +Y+ +V A+N VG P SE A P P+ +
Sbjct: 626 VILSLAP---YVKYKFRVIAVNSVGRSQPSKPSEHHETPPA--APDKNPENIRVDASEPN 680
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TK 464
+ + W P++ + +N G + +R+ W+ E + T + L++ P
Sbjct: 681 EMIMKWEPLKPMEQN--GPGLEYRVS-WRRQGVETD---WNEETVKKHVLVLKNTPTFAP 734
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N G GPE + + P P V + IN T ++ TW +
Sbjct: 735 YDIKVQAINQFGSGPEPQVATGYSGEDYPDAAPLNVAVNIINSTLINATWSKIPRERVHG 794
Query: 525 PIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGD 579
+ GYK+ W+ +D+ R + D +V L P +H+ VLAF++ G
Sbjct: 795 HLKGYKISWWKTKSLLDERKHRQEKHFLVFWGDRDHGMVPGLEPYSEFHLSVLAFNSKGS 854
Query: 580 GRMSSPAITFQMGE 593
G SSP I FQ E
Sbjct: 855 GPESSP-IIFQTPE 867
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 18/177 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C E P P+ WKK DGN+ ++ F L I VS D G Y C+A+
Sbjct: 209 GSTLLLECFAEGLPTPQITWKKLDGNLPKDREAKENF-GKTLKIEQVSNTDEGTYLCSAS 267
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + + + V P + Q P + N LRC A ++ W NG+
Sbjct: 268 NFMGSAKHEFHVTV-EEPPRWTQKPKSGVYSIGSNAILRCEASGNPRPEIK--WKRNGLP 324
Query: 124 IGNMDLNELETPNINIDGGL----LEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ N+ G + + + N + Y+C + G I V V
Sbjct: 325 VNK---------NLVSSGQIFPREISLVNLQLDQSAVYQCEASNKHGTILANANVDV 372
>gi|95007729|dbj|BAE94190.1| contactin/TAG-1 cell adhesion molecule [Dugesia japonica]
Length = 1156
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 203/642 (31%), Positives = 299/642 (46%), Gaps = 54/642 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNI--------------IGSGGRRKIFENGNLLISPV 50
G +V I C PE +P P W +G I G I N NL I V
Sbjct: 484 GMDVIIPCKPEGSPAPTITWSFNGGTLTLGPTNFDQILGKISCAGDICIMPNRNLFIKSV 543
Query: 51 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL 110
G+Y+CTA NV G S L V+ P + + N+ L C A
Sbjct: 544 KTSHIGMYTCTAVNVLGTASSSAYLDVIPKLE-ISNFPVGRRVQVNSNVYLPCQAAGTPY 602
Query: 111 LDVAYIWTHNGVRI--GNMDLN-------ELETPNINIDGGLLEITNASFADAGEYECVV 161
LD+ Y W VR+ MDL+ + P G L+I N F D Y C V
Sbjct: 603 LDIDYDWYFENVRLKFDRMDLDARRYDKSQFMRPYYRY-FGTLKIFNIQFYDEANYTCRV 661
Query: 162 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKI-IART 219
+ + V GPPG+ GG+ V V T + T++WTDG +G PI Y++ ++R
Sbjct: 662 TTPFAVEVIPALIQVLGPPGVGGGITVTPVVGTVNHTVEWTDGYDHGSPILWYRLEVSRV 721
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVL----VPWST-YEFKVIAGNELGYGEPS 274
N W + + I K ++ + N L +P +T + ++ A N G GEPS
Sbjct: 722 NVQQEWIILLDK-INKTSITPINKQNNLVRNQLSFSGLPANTNFRLRLFAANSFGLGEPS 780
Query: 275 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 334
S S + T A P ++P + GGGGK+G L I WEPL ++N N Y+I +++ + +
Sbjct: 781 SQSEVFKTEAIPPQKSPQNVTGGGGKVGTLVIRWEPLLPLEENGDNFEYEIQYKEAKEVD 840
Query: 335 FQSET--LKEYGNVG--IAVVR-IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM 389
+ S T L + + G + V R +P+ Y +EVKV+A+N G GP S + TI S+ +
Sbjct: 841 WISYTGFLNKSLDNGKYLQVTRDLPANKDYLPFEVKVRAVNIKGAGPWSAISTITSSSKL 900
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--DNPEETAVYYLS 447
P AP + + NSTAINV W + + G + G+ I YW D + A Y
Sbjct: 901 PSFAPLNINADSLNSTAINVQWAAPSVGQG--EGPIQGYHIVYWMRVSDCKSQAASYDRL 958
Query: 448 RTTRNWAL---------IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
T++ L I+GLQPD Y + V +N AG+ ES + T++ PQ P+
Sbjct: 959 NTSQRLTLYGSDLVKGIIIGLQPDKYYCIGVQMFNTAGDSLESSFVDQTTFKMPPQNFPT 1018
Query: 499 AVHIKGIN-PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD 557
V + N P + VTW V EEE + GY++R W + A D + VG +
Sbjct: 1019 IVRLNSTNTPHQIQVTWNGVRVMPEEESVDGYRIRYWLSGGPVRTALD--VDVGLKVTGY 1076
Query: 558 IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
I DL RY+MR+ A+S GG+G++S+P F + + +S
Sbjct: 1077 INDLQYDVRYNMRIFAYSRGGNGKLSNPMDQFMLIPKSRCQS 1118
>gi|351706958|gb|EHB09877.1| Contactin-4 [Heterocephalus glaber]
Length = 544
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 252/549 (45%), Gaps = 27/549 (4%)
Query: 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETP 135
V+ P+ P + + ++ L C + LD+ + W+ N I + D + E
Sbjct: 11 VMEDPTRVIVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNEHLIDFDKDGDHFERV 70
Query: 136 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTS 195
G L I N AG+Y C+V+++V ++S +IV GPPG P V + E+ T+
Sbjct: 71 GGQDSAGDLMIRNIQLKHAGKYICMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTT 130
Query: 196 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 255
A + W G N PIT Y I ART ++ W VS + + +D G+ + L PW
Sbjct: 131 AQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GKTFTATVVGLNPW 185
Query: 256 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315
YEF+ +A N +G GEPS PS + T P P+ + GGGG +L I+WE +P E
Sbjct: 186 VEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEEL 245
Query: 316 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 375
QN Y + +R + L + V R S ++ +EVKV N+ G G
Sbjct: 246 QNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFEVKVGVFNNKGEG 304
Query: 376 PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 435
P S ++SAE+ P P +F+R ++T I V W + +N RGR+ G+ +KYW+
Sbjct: 305 PFSPTTVVYSAEEEPAKPPASIFARSLSATDIEVFW--ASPLGKN-RGRIQGYEVKYWRH 361
Query: 436 DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495
D+ EE A + + I LQ Y++ V AYN+AG GP S T + P +
Sbjct: 362 DDKEENARKIRTVGNQTSTKITNLQGSALYHLAVKAYNSAGTGPSSVTVNVTTRKPPPSQ 421
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS--RANDTIIPVGN 552
PP + I + + + + W V E + GYKV W S N T + +
Sbjct: 422 PPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSL 480
Query: 553 TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKEFKSGSPALYSAS 608
D D Y + + FS+GGDG S P I+ + + SA
Sbjct: 481 PFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSGASTSNACTLSAI 531
Query: 609 TTLLLVMSS 617
+T+++ +++
Sbjct: 532 STIMISLTA 540
>gi|149036841|gb|EDL91459.1| rCG56294, isoform CRA_b [Rattus norvegicus]
Length = 966
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 171/580 (29%), Positives = 256/580 (44%), Gaps = 71/580 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R + +G L I V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAA----------- 590
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
++I R V E + GK R
Sbjct: 591 ------------------------------ELIVR---------VPEAIDGKT------R 605
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+E L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +
Sbjct: 606 TATVVE--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 663
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 664 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 722
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 723 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSN--G 780
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + A++ GL+ + YY V AYN AG GP S
Sbjct: 781 RLLGYEVRYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSAT 840
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 841 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQNNVQV 899
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 900 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 933
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ ++++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
>gi|345323882|ref|XP_001511552.2| PREDICTED: contactin-6 [Ornithorhynchus anatinus]
Length = 569
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 240/501 (47%), Gaps = 25/501 (4%)
Query: 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 146
P ++ + ++ L C + + ++V + W+ NG I ++ E G L+ I
Sbjct: 47 PSQMDVTVGESIVLPCQVYHDPSVEVVFTWSFNGDMIDFQRGVDHFERIGGESVGDLM-I 105
Query: 147 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 206
N +G+YEC+V++T+ +S +VIV GPPG P V+V T++ + W G N
Sbjct: 106 RNIQLGHSGKYECLVQTTIDSLSATASVIVRGPPGPPDDVRVEHFSNTTSQLHWRPGLDN 165
Query: 207 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 266
P+ Y I RT ++ W VS + G+ ++ L PW YEF+V+A N
Sbjct: 166 NSPVQIYTIQTRTPFSIGWQAVS-----TVPEILNGKTYSATVVGLNPWIEYEFRVVAAN 220
Query: 267 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 326
+G GEPS PS T A P P+ I GGGG +L I+WE +P E QN Y I
Sbjct: 221 SVGIGEPSQPSQLLRTKASVPVAVPTNISGGGGSRSELIITWESIPEELQNGEGFGYTIM 280
Query: 327 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSA 386
+R + + R S + +EVKV N+ G G S ++S
Sbjct: 281 FRPLGSITWTKAIVASV-EASKYTYRNESITPLSPFEVKVGVYNNEGEGALSTASIVYSG 339
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446
ED PQ+AP GV ++ F+++ + V+W+ I R GR++G+ + YW +D+ E A
Sbjct: 340 EDEPQLAPSGVSAQSFSASEMEVSWSAIAWSRHT--GRVLGYEVSYWTDDSKETIAGKVR 397
Query: 447 SR---TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 503
TT+N I GL+ +T Y+ V A+N AG GP S T + P +PP+ + K
Sbjct: 398 VSGNITTKN---ITGLKANTVYFATVRAHNTAGTGPSSTPVNATTKKSPPSQPPANIAWK 454
Query: 504 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 563
N + + + W +V E ++GYK+ + Q + +T N A++ L P
Sbjct: 455 LTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHVLET-----NNTSAEL--LVP 506
Query: 564 GKR-YHMRVLAFSNGGDGRMS 583
+ Y + + S+GGDG S
Sbjct: 507 FEEDYLVEIKTVSDGGDGSSS 527
>gi|354483119|ref|XP_003503742.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Cricetulus griseus]
Length = 1206
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/523 (30%), Positives = 248/523 (47%), Gaps = 37/523 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK +W+ D G R ENG L I + +D+G YSC
Sbjct: 435 GYSAFLHCEYFASPKATVIWEVADEAHPLEGSRYHTHENGTLEIYRTTEEDAGSYSCWVD 494
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VAYIWTHNG 121
N G L + + + + P I L+L C + + L + W+ +G
Sbjct: 495 NAMGKAVITANLDIRNA-TKLKVSPKNPRIPKSHMLELHCESQCDSHLKHTLKLSWSKDG 553
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
D+N E I IDG L I+N S D G Y C ++ + IS KT V V G P
Sbjct: 554 ---ETFDINGTEDGRIVIDGANLTISNISVEDQGIYSCSAQTALDSISEKTQVTVLGVPD 610
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG + + E S + W G + I+ Y I N W +E+ R
Sbjct: 611 PPGSLLLSERQNRSVRLSWEAGDDHNSNISEYIIEFEGNREEPGKW---------QELTR 661
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G + ++ + L P+ Y+F+VIA NE+G PS PS + TP P + P I
Sbjct: 662 IPGEETEAVLS-LAPYVRYQFRVIAVNEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQAS 720
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 721 QPKEMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPEEWEEETVTNH------TLRVMTPTV 774
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQAIN +G GPE + VT++S ED P AP NST + VTW+ I +
Sbjct: 775 YAPYDVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHGVDVMNSTLVKVTWSSIP--K 832
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
E + G L G++I +WK +P+E + S RN ++ L ++Y++ V+A
Sbjct: 833 ETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEYHLTVLA 891
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
YN+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 892 YNSKGAGPESEAYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 933
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 676 YVRYQFRVIAVNEVGRSYPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 735
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ + + PEE + T N L V + P Y V+V A N
Sbjct: 736 EQN--GPGLEYRVSWKPQGAPEE----WEEETVTNHTLRV-MTPTVYAPYDVQVQAINQL 788
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + P P + +N T V VTW + + GY++ W+
Sbjct: 789 GSGPEPQPVTLYSGEDYPSTAPVIHGVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWK 848
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L YH+ VLA+++ G G S A FQ
Sbjct: 849 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEYHLTVLAYNSKGAGP-ESEAYIFQ 907
Query: 591 MGE 593
E
Sbjct: 908 TPE 910
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G+ + G K L I +S D G Y CTA+
Sbjct: 251 KGETLLLECFAEGLPTPQVEWSKPGSELPKGRETKENYGKTLKIENISYHDKGNYRCTAS 310
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S I++ P +++ P + + L C A E + W NG
Sbjct: 311 NLLG-KASHDFHIIVQEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRVNGFP 367
Query: 124 IGN 126
I N
Sbjct: 368 IEN 370
>gi|345786242|ref|XP_533760.3| PREDICTED: neural cell adhesion molecule L1-like protein [Canis lupus
familiaris]
Length = 1225
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 275/593 (46%), Gaps = 43/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P P W+K GRR I ENG L I+ + DD+G YSC
Sbjct: 454 GYSAFLHCEFFASPDPVVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELL--DVAYIWTHN 120
N G L + + Q+ PK + L+L C + + L + W+ N
Sbjct: 514 NAKGKTAVTANLDIRNATKL--QVSPKNPRVPKLHTLELHCESTCDPHLRHSLKLSWSKN 571
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G ++N E I IDG L I+N + D G Y C ++ + ++ T V V P
Sbjct: 572 GEA---FEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDVTQVTVLDVP 628
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVD 238
P + + E S + W G + I+ Y + N W +E+
Sbjct: 629 DPPENLHLSERQNRSVRLTWEAGDDHNSHISEYIVEFEGNKEEPGRW---------EELT 679
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 680 RVQG-KETTVMLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQA 738
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 357
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 739 SQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPT 792
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+V+VQAIN +G GPE + V ++S ED P AP NST + VTW+ I
Sbjct: 793 VYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP-- 850
Query: 418 RENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
++ + G L G++I +WK +P+E + S RN+ ++ L +++++ V+
Sbjct: 851 KDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFHLTVL 909
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
AYN+ G GPESE Y+ +T P++P IK ++ T +TW P + GY
Sbjct: 910 AYNSKGAGPESEPYIFQTPEGVPEQPAFLKVIK-VDKDTATLTWGL--PKKLNGNLTGYL 966
Query: 531 VRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 967 LQYQIINDTYELGELNDINITTPSKPSWRLSNLNATTKYKFYLRACTSKGCGK 1019
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY++ W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGHLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 10/174 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYRDRGNYRCTAN 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P ++ + P + + L C A E + W NG
Sbjct: 330 NFLGSTTHDFHVIV-EEPPHWTKKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGSP 386
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I N ++ +P G + TN Y+C + G I + V
Sbjct: 387 IDKNPFAGDVVSP------GEISFTNLQPNHTAVYQCEASNVHGTILANANIDV 434
>gi|402859578|ref|XP_003894229.1| PREDICTED: contactin-3-like, partial [Papio anubis]
Length = 832
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 215/425 (50%), Gaps = 11/425 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ + WKK + R + ++G L I+ V++ D+G Y+C A N
Sbjct: 417 GSLVSLDCKPRASPRARSSWKKGDVSVQEHARISLLKDGGLKIANVTKADAGTYTCMAEN 476
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 477 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 535
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 536 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 594
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W ++ + + +D G+
Sbjct: 595 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTIT--TVPEVID---GK 649
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 650 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 709
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 710 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 768
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 769 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 826
Query: 424 RLIGH 428
L+G+
Sbjct: 827 HLLGY 831
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 332 CRASGKPKPSYRWLKNGAALVLEERIQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 390
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 391 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRARSSW-------KKGDVSV 443
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 444 QEHARISLLKDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 492
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 19/232 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG S + + F NG L I ++D+G Y C
Sbjct: 232 AAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKF-NGVLEIPNFQQEDAGSYEC 290
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L C A + +Y W N
Sbjct: 291 IAENSRGKNVARGRLTYYAKP-HWVQLIKDVETAVEDSLYWECRASGKP--KPSYRWLKN 347
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179
G + L E I I+ G L I+N S D+G ++C+ ++ G + S+ +V
Sbjct: 348 G---AALVLEE----RIQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASA 400
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
P V ++ D P AR++W +V EH
Sbjct: 401 PDFSKNPMKKLVQVQVGSLVSLDCKPRASP------RARSSWKKGDVSVQEH 446
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P + + E +P+V P V G + + + +TW+P+ E
Sbjct: 661 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEE 720
Query: 416 LIRENIRGRLIGHR---IKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
L G ++ R + W + +T Y RN +++ P + Y VKV
Sbjct: 721 LQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVF----RNESIV----PYSPYEVKVG 772
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEGP S + + P PS V ++ + + V+W + ++GY+
Sbjct: 773 VYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYE 832
>gi|62413634|ref|NP_001014814.1| contactin-1 precursor [Danio rerio]
gi|34419873|gb|AAQ67360.1| recognition molecule F3-b [Danio rerio]
Length = 1031
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 160/538 (29%), Positives = 251/538 (46%), Gaps = 24/538 (4%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E G V I CNP AAPKP+F+WK+ ++ + R I+++G+L I ++ D G Y+C A
Sbjct: 431 AENGRVVIECNPRAAPKPRFIWKRGSELLSNSSRIFIWDDGSLEILNATKSDEGSYTCYA 490
Query: 63 TNVHGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
N G S G L + GPS E A + L+CSA + LDV +I
Sbjct: 491 ENDRGKSNSTGTLTITEATKITVGPSNSEA-------AVGDTIVLQCSASYDPSLDVTFI 543
Query: 117 WTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
WT + I D E + + G L I N AG Y C ++ V + + V
Sbjct: 544 WTVDSYSINFYTDFEHYELDMDHENSGDLLIKNIQIRHAGHYICTAQTIVDNATAEADVF 603
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V G PG PGGV+V E+ TS I+W G+ +G P+ + + R + + +
Sbjct: 604 VRGLPGPPGGVRVEEIGDTSVKIRWCLGSDHGSPLIQHIVQTRDFYA---LDPEDWKTAT 660
Query: 236 EVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ G E++ L PW YEF+V A NE G GE S PS + T +P APS +
Sbjct: 661 TTPAFLNGSTESATVVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDV 720
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
G G G+L ++W P+ + Y + +++ D E++ T+++ V
Sbjct: 721 IGQVGISGELIVTWNPVKPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETR--RYVYKE 778
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
S TE ++KV N+ G GP S + ++S P AP V++R ST V W P
Sbjct: 779 SMTPDTEIQIKVSTFNNKGEGPASLISVVYSPRIAPTEAPLDVYARQVTSTEALVWWLP- 837
Query: 415 ELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + + G++I+YW++ D+ E A + T N + ++PD+ Y ++V A+N
Sbjct: 838 --VYQAPPMWVDGYQIRYWRKYDDNEAAASRVIVHRTVNQTRLENMRPDSHYLIEVRAFN 895
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
AG GP SE T R P + +++ W ++ + E + GYK+
Sbjct: 896 GAGLGPPSEHCEMFTRRPPPSRRLRVYKYVSFTRKWLYLYWDHIYNYWNESYVEGYKI 953
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 141/599 (23%), Positives = 225/599 (37%), Gaps = 70/599 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C P P W KDG G G L S ++ +DSG+Y C A N
Sbjct: 349 GSELTLRCVAVGKPIPWIRWLKDGYSYG---------KGELKFSSLTFEDSGMYQCIAEN 399
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + L V+ + P K + N ++ + +IW +
Sbjct: 400 EWGTIYANAELRVVSCAPTFIYNPVKKILLGAENGRVVIECNPRAAPKPRFIWKRGSELL 459
Query: 125 GNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS-------TKTTVIV 176
N + I I D G LEI NA+ +D G Y C ++ GK + T+ T I
Sbjct: 460 SN-------SSRIFIWDDGSLEILNATKSDEGSYTCYAENDRGKSNSTGTLTITEATKIT 512
Query: 177 EGPPGLPGGVQVVEVHKTSA--------TIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
GP V V + SA T WT + I Y + N
Sbjct: 513 VGPSNSEAAVGDTIVLQCSASYDPSLDVTFIWT---VDSYSINFYTDFEHYELDMDHENS 569
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ +I R+ G + + + V +T E V G P P
Sbjct: 570 GDLLIKNIQIRHAGHYICTAQTI-VDNATAEADVFVR-----GLPGPPG----------- 612
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI----FWRKKNDTEFQSETLKEYG 344
G +IGD S+ +P I + + F+ + + T +
Sbjct: 613 ------GVRVEEIGDTSVKIRWCLGSDHGSPLIQHIVQTRDFYALDPEDWKTATTTPAFL 666
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFN 403
N + + + +YE +V AIN+ G G S + I + + P VAP V +
Sbjct: 667 NGSTESATVVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIGQVGI 726
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
S + VTWNP++ + G+ G+ + + + ++ E TR + + PDT
Sbjct: 727 SGELIVTWNPVK--PQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETRRYVYKESMTPDT 784
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
+ +KV +NN GEGP S + + R AP + P V+ + + T V W P ++
Sbjct: 785 EIQIKVSTFNNKGEGPASLISVVYSPRIAPTEAPLDVYARQVTSTEALVWWL---PVYQA 841
Query: 524 EP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
P + GY++R W D A +I + ++ P Y + V AF+ G G
Sbjct: 842 PPMWVDGYQIRYWRKYDDNEAAASRVIVHRTVNQTRLENMRPDSHYLIEVRAFNGAGLG 900
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 48/269 (17%)
Query: 4 EGGNVTIFCNPEAA-PKP---KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIY 58
EG + C P + P ++++ N I RR + ++ GNL I+ V D G Y
Sbjct: 154 EGQGAVLLCTPPSRYPDEVMFRWIYNDFPNFIIPDQRRFVSQSTGNLYIAKVEPSDVGNY 213
Query: 59 SCTATN------VHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
SC ++ V M + I V P+ PK H+N+ L C A
Sbjct: 214 SCFVSSPTIGKSVFSMPIALIPQIEKEVKRYPADIRVKFPKTYALVHQNITLECFALGNP 273
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
L +R +D + ++++G LL + N + D G YEC + G
Sbjct: 274 L---------PHIRWRKLDADLPPNYEVSMNGALLHLINVQYEDEGSYECETLNVKGMDW 324
Query: 170 TKTTVIVEGPP-------------GLPGGVQVVEVHKTSATIQW-TDGATNGR------P 209
+ + VEGPP G ++ V V K I+W DG + G+
Sbjct: 325 YRQWLYVEGPPEWAEHINDTEKDVGSELTLRCVAVGKPIPWIRWLKDGYSYGKGELKFSS 384
Query: 210 ITH-----YKIIARTNWNSTWFNVSEHVI 233
+T Y+ IA W + + N V+
Sbjct: 385 LTFEDSGMYQCIAENEWGTIYANAELRVV 413
>gi|345308001|ref|XP_001505313.2| PREDICTED: contactin-3-like [Ornithorhynchus anatinus]
Length = 505
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 228/453 (50%), Gaps = 15/453 (3%)
Query: 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
+++ NI G L I N G+Y C+V++ V +S+ T +IV G PG P ++V +
Sbjct: 25 QMDPGNIGSSAGDLMIRNVQLKHGGKYVCMVETGVDSVSSSTDLIVRGSPGPPESLKVDK 84
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 250
+ T + W +G N PIT Y I ART ++ W V+ + + +D G+ +
Sbjct: 85 ITDTKVQLSWKEGIDNYSPITFYTIQARTPFSVGWQRVA--TVPEVID---GKTLTATVV 139
Query: 251 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 310
L PW YEF+V+A N++G GEPSSPS + T P PS + GGGG +L I+W+P
Sbjct: 140 DLNPWVEYEFRVVANNKIGGGEPSSPSTKVRTEEAAPEVPPSEVSGGGGSRSELVITWDP 199
Query: 311 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 370
+P E QN Y + +R + + +T+ + V R S ++ YEVKV N
Sbjct: 200 VPEELQNGEGFGYVVAFRPLGLSTW-IQTVVTSPDTPRYVFRNESILSFSPYEVKVGVYN 258
Query: 371 DVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI 430
+ G GP S V T+FSAE+ P +AP GVF+ +S+ I V+WN I R + GRL+G+ I
Sbjct: 259 NKGEGPFSPVATVFSAEEEPAIAPSGVFANSISSSVIEVSWNAIPWKRSS--GRLLGYEI 316
Query: 431 KYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
+YW E + A + GL+ + YY V AYN+AG GP S T +
Sbjct: 317 RYWTNGEREGSTNRVKVAGNETSARLRGLKSNLTYYTAVRAYNSAGSGPFSATVNATTKK 376
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV 550
P +PP V + + V ++W V E + GYKV W Q + +T
Sbjct: 377 MPPIQPPGNVVWNATD-SKVLLSWEQVKAMENESEVTGYKVFYWTSSQSSMKVLNT---- 431
Query: 551 GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
N A++ L + Y + V A ++GGDG S
Sbjct: 432 -NKTYAELF-LPTDEDYTIEVKAKTDGGDGTNS 462
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI--E 415
+ EYE +V A N +G G P S + + E P+V P V G + + + +TW+P+ E
Sbjct: 144 WVEYEFRVVANNKIGGGEPSSPSTKVRTEEAAPEVPPSEVSGGGGSRSELVITWDPVPEE 203
Query: 416 LIRENIRGRLIGHR---IKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
L G ++ R + W + +T Y + I+ P Y VKV
Sbjct: 204 LQNGEGFGYVVAFRPLGLSTWIQTVVTSPDTPRYVFRNES-----ILSFSP---YEVKVG 255
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEGP S + + P PS V I+ + + V+W + ++GY+
Sbjct: 256 VYNNKGEGPFSPVATVFSAEEEPAIAPSGVFANSISSSVIEVSWNAIPWKRSSGRLLGYE 315
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+R W + N + GN A + L Y+ V A+++ G G S+
Sbjct: 316 IRYWTNGEREGSTNRVKV-AGNETSARLRGLKSNLTYYTAVRAYNSAGSGPFSA 368
>gi|281350365|gb|EFB25949.1| hypothetical protein PANDA_014328 [Ailuropoda melanoleuca]
Length = 1195
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 278/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR ++ENG L I+ + DD+G YSC
Sbjct: 424 GYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVE 483
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA----HTEELLDVAYIWTH 119
N G L + + + + P + L+L C + H ++ L ++ W+
Sbjct: 484 NAKGKTAVTANLDIRNA-TKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLKLS--WSR 540
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
NG ++N E I IDG L I+N + D G Y C ++ + ++ T V V
Sbjct: 541 NGEA---FEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDV 597
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEV 237
P P +Q+ E S + W G + I+ Y + N W +E+
Sbjct: 598 PDPPESLQLSERQNRSVRLTWEAGDDHNSHISDYIVEFEGNKEEPGRW---------EEL 648
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G KE +I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 649 ARVQG-KETTITLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQ 707
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 708 ASQPKEMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPVEWEEETVTNH------TLRVMTP 761
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+V+VQAIN +G GPE + V ++S ED P AP NST VTW+ I
Sbjct: 762 TVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIP- 820
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + G L G++I +WK +P+E + S RN+ ++ L +++++ V
Sbjct: 821 -KDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFHLTV 878
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++P IK ++ T +TW P + GY
Sbjct: 879 LAYNSKGAGPESEPYIFQTPEGVPEQPAFLKVIK-VDKDTATLTWGL--PKKLNGNLTGY 935
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 936 LLQYQIINDTYELGELNDINITTPSKPSWRLSNLNATTKYKFYLRACTSKGCGK 989
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 665 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 724
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 725 EQN--GPGLEYRVS-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAINHL 777
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T VTW + + GY++ W+
Sbjct: 778 GSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKDRVHGHLKGYQINWWK 837
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 838 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 896
Query: 591 MGE 593
E
Sbjct: 897 TPE 899
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K + L I VS D G Y CTA
Sbjct: 240 KGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYSKTLKIENVSYRDRGNYRCTAN 299
Query: 64 NVHGMDESKGRLIVLHGPSYYEQ 86
N G +IV P + ++
Sbjct: 300 NFLGSTTHDFHVIVEEPPRWTKK 322
>gi|301779003|ref|XP_002924918.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Ailuropoda melanoleuca]
Length = 1225
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 278/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR ++ENG L I+ + DD+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHVYENGTLQINKTTEDDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA----HTEELLDVAYIWTH 119
N G L + + + + P + L+L C + H ++ L ++ W+
Sbjct: 514 NAKGKTAVTANLDIRNA-TKLQVAPKNPRVPRLHALELHCESTCDPHLKQSLKLS--WSR 570
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
NG ++N E I IDG L I+N + D G Y C ++ + ++ T V V
Sbjct: 571 NG---EAFEINATEDGRIIIDGANLTISNVTSEDQGIYSCSAQTALDSVTDATQVTVLDV 627
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEV 237
P P +Q+ E S + W G + I+ Y + N W +E+
Sbjct: 628 PDPPESLQLSERQNRSVRLTWEAGDDHNSHISDYIVEFEGNKEEPGRW---------EEL 678
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G KE +I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 679 ARVQG-KETTITLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQ 737
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVSWKPQGAPVEWEEETVTNH------TLRVMTP 791
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+V+VQAIN +G GPE + V ++S ED P AP NST VTW+ I
Sbjct: 792 TVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIP- 850
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + G L G++I +WK +P+E + S RN+ ++ L +++++ V
Sbjct: 851 -KDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFHLTV 908
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++P IK ++ T +TW P + GY
Sbjct: 909 LAYNSKGAGPESEPYIFQTPEGVPEQPAFLKVIK-VDKDTATLTWGL--PKKLNGNLTGY 965
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 966 LLQYQIINDTYELGELNDINITTPSKPSWRLSNLNATTKYKFYLRACTSKGCGK 1019
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVS-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T VTW + + GY++ W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLAKVTWSTIPKDRVHGHLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K + L I VS D G Y CTA
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYSKTLKIENVSYRDRGNYRCTAN 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQ 86
N G +IV P + ++
Sbjct: 330 NFLGSTTHDFHVIVEEPPRWTKK 352
>gi|260822511|ref|XP_002606645.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
gi|229291989|gb|EEN62655.1| hypothetical protein BRAFLDRAFT_120092 [Branchiostoma floridae]
Length = 2215
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 244/518 (47%), Gaps = 34/518 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+ + C +PKP+ W K+ + +G R ++ NG L+I+ VS +D G Y C A N
Sbjct: 1388 DAQLDCLSFGSPKPEITWYKEELL--AGDRYQVLSNGTLVITTVSTEDDGKYKCMAINKF 1445
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + + L V + P + + A Q C+ + L++ W NG+ I
Sbjct: 1446 GEEPLQAELSVKRK-TTIATPPIALEVRAGNEAQFVCAVDKDPDLELTITWLKNGIPI-- 1502
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
M + + P + G L I + +D+ Y C+ ++T + S + + V P P +
Sbjct: 1503 MPGSRIMQPVL----GTLLIKDTINSDSAIYTCLARTTRDEASAQAALSVIDVPEPPMNL 1558
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRK 244
Q+ +S T+ W G+ N PI Y I N W +E+ G+
Sbjct: 1559 QLSNQADSSVTLSWNVGSDNNSPIEGYTIQYEENRMMPGEW---------QEMKVIDGKD 1609
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L PW TY+F+V A N++G EPS + Y TPA P P I G G + ++
Sbjct: 1610 ILTADLDLNPWLTYQFRVTARNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEPTNM 1669
Query: 305 SISWEPLPREKQNAPNIYYKIFW--------RKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
ISWEPLP +QN P + Y++ + R++ D+++ +ET+ + V P+
Sbjct: 1670 VISWEPLPGLQQNGPGLKYEVRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPT- 1728
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
YT YE+ VQA ND G GP S+VV +S ED P A + R ++ + W+P++
Sbjct: 1729 --YTAYEITVQAKNDFGDGPLSDVVVGYSGEDFPAAAVENTAVRDVQPRSVRLDWDPVD- 1785
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
E++ G L G++++YW +D+P+ ALI GL P Y V+ YN G
Sbjct: 1786 -EESVNGDLKGYKVRYWSDDDPDNVMEKTFEGDEPT-ALIDGLTPFKNYNFTVVPYNGKG 1843
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+GP S ++ + ++ P A+ ++ T+ V W
Sbjct: 1844 DGPPSSPPVKASTPESTPGAPGALRANVVDSKTLDVQW 1881
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 8/232 (3%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A N VG S+ ++ P P G+ G T + ++W P+ +++N
Sbjct: 1623 YQFRVTARNKVGESEPSDATEGYTTPAAAPSSVPGGIKGEGTEPTNMVISWEPLPGLQQN 1682
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW----ALIVGLQPD-TKYYVKVMAYNNA 475
G R + E A + T N IV P T Y + V A N+
Sbjct: 1683 GPGLKYEVRYRQQPEARKRRQADSDWTTETVNDPNGNEFIVEDTPTYTAYEITVQAKNDF 1742
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G+GP S+ + + P ++ + P +V + W V + GYKVR W
Sbjct: 1743 GDGPLSDVVVGYSGEDFPAAAVENTAVRDVQPRSVRLDWDPVDEESVNGDLKGYKVRYWS 1802
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D + T G+ A I L+P K Y+ V+ ++ GDG SSP +
Sbjct: 1803 DDDPDNVMEKTF--EGDEPTALIDGLTPFKNYNFTVVPYNGKGDGPPSSPPV 1852
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++T+ C E P P+ W++ R ++ +L+I V D+G Y CTA+N
Sbjct: 1206 GEDLTLRCITEGLPTPEVRWRRTSGGSLPSARARVV-GTSLIIEEVVERDAGSYECTASN 1264
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G D + + V P Y++ P +A + + C A +V+ W NG +
Sbjct: 1265 SLGKDTYEVMVTVNAAP-YWKTEPEGQMLAPGDDATILCEAAGTPTPEVS--WKRNGEPL 1321
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGPPGLP 183
G+ N + G L + ++ Y+C+ ++ +G +I+ +VE PP
Sbjct: 1322 GDQ-------ANRRVSGTTLSLQELVKDNSAVYQCIARNNLGTRITNAYINVVELPP--- 1371
Query: 184 GGVQVVEVHKTSATIQWTDG 203
+ + +K A +Q D
Sbjct: 1372 --IMLTAANKKYAYVQDQDA 1389
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 32/190 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + TI C P P+ WK++G +G R++ L + + +D+S +Y C A N
Sbjct: 1295 GDDATILCEAAGTPTPEVSWKRNGEPLGDQANRRV-SGTTLSLQELVKDNSAVYQCIARN 1353
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR--------NLQLRCSAHTEELLDVAYI 116
G + + V+ +LPP + AA++ + QL C + ++
Sbjct: 1354 NLGTRITNAYINVV-------ELPPIMLTAANKKYAYVQDQDAQLDCLSFGSPKPEIT-- 1404
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG------KIST 170
W + G D ++ + G L IT S D G+Y+C+ + G ++S
Sbjct: 1405 WYKEELLAG--DRYQV------LSNGTLVITTVSTEDDGKYKCMAINKFGEEPLQAELSV 1456
Query: 171 KTTVIVEGPP 180
K + PP
Sbjct: 1457 KRKTTIATPP 1466
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 135/623 (21%), Positives = 216/623 (34%), Gaps = 89/623 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G C + P + W K+G I G R G LLI DS IY+C A
Sbjct: 1474 GNEAQFVCAVDKDPDLELTITWLKNGIPIMPGSRIMQPVLGTLLIKDTINSDSAIYTCLA 1533
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD---------- 112
++ L V+ P PP NLQL A + L
Sbjct: 1534 RTTRDEASAQAALSVIDVPE-----PPM-------NLQLSNQADSSVTLSWNVGSDNNSP 1581
Query: 113 -VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD--AGEYECVVKSTVGK-- 167
Y + R+ + E++ IDG + + ++ ++ VG+
Sbjct: 1582 IEGYTIQYEENRMMPGEWQEMKV----IDGKDILTADLDLNPWLTYQFRVTARNKVGESE 1637
Query: 168 ---ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW--TDGATNGRPITHYKIIARTNWN 222
+ T P +PGG++ T+ I W G P Y++ R
Sbjct: 1638 PSDATEGYTTPAAAPSSVPGGIKGEGTEPTNMVISWEPLPGLQQNGPGLKYEVRYRQQPE 1697
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ ++ E E +E+ ++ YE V A N+ G G S Y+
Sbjct: 1698 ARKRRQADSDWTTETVNDPNGNEFIVEDTPT-YTAYEITVQAKNDFGDGPLSDVVVGYSG 1756
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLK 341
D P A + + + W+P+ E N YK+ +W + +T +
Sbjct: 1757 -EDFPAAAVENTAVRDVQPRSVRLDWDPVDEESVNGDLKGYKVRYWSDDDPDNVMEKTFE 1815
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
G+ A++ + F Y V N G GP S S + AP + +
Sbjct: 1816 --GDEPTALIDGLTPF--KNYNFTVVPYNGKGDGPPSSPPVKASTPESTPGAPGALRANV 1871
Query: 402 FNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKE------------------DNPEETA 442
+S ++V W P+E G + G+ + Y D+P +T+
Sbjct: 1872 VDSKTLDVQWEAPLE-----PNGAITGYLLTYRTMPGPGVPEGRLGTPVEEVFDDPAKTS 1926
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVH 501
V + W Y +++ A G G E LE T AP P V
Sbjct: 1927 VRLEELDEQTW-----------YRIELRAKTKIGPGDVKE--LETSTSDPAPPLKPETVE 1973
Query: 502 IKGINPTTVHVTW--RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDAD 557
I ++V+W V P + + Y+ R +Q M +++ P TL
Sbjct: 1974 ILDTGEDFINVSWVPAKVGPR-PSQFYVEYRERGTNSEQ-MWLQTESVDPDPYSETLQKT 2031
Query: 558 IVDLSPGKRYHMRVLAFSNGGDG 580
I L+PG RY +RV+A +N G G
Sbjct: 2032 IDGLNPGTRYQLRVVASNNFGKG 2054
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 26/180 (14%)
Query: 15 EAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT-NVHGMDESK 72
EA P P W KDG N I R I +L+ + V D+G YSC A + G
Sbjct: 1114 EAIPPPTIYWTKDGSNPIDLTERISIDAENSLIFANVEEGDAGEYSCRAEYSKLGTIRIA 1173
Query: 73 GRLIVL---------HGPSYYEQ---LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
L ++ PS+ ++ LPP + +L LRC +V + T
Sbjct: 1174 NTLTLIVDTASPRGARAPSFLKRDINLPP---VNRGEDLTLRCITEGLPTPEVRWRRTSG 1230
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G L + + G L I DAG YEC +++GK + + V V P
Sbjct: 1231 G---------SLPSARARVVGTSLIIEEVVERDAGSYECTASNSLGKDTYEVMVTVNAAP 1281
>gi|395824573|ref|XP_003785537.1| PREDICTED: neural cell adhesion molecule L1-like protein [Otolemur
garnettii]
Length = 1209
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 168/592 (28%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK-IFENGNLLISPVSRDDSGIYSCTAT 63
G N + C A+P+ W+K GRR I ENG L IS + DD+G YSC
Sbjct: 438 GYNAFLHCEFFASPEAIVSWQKVEEAKPLEGRRHWIHENGTLQISSTTEDDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTH 119
N G L + + + P I L+L +C +H ++ L ++ W
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHVLELHCESKCDSHLKDSLKLS--WNK 554
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G ++N E I IDG L I+N + D G Y CV ++ + I+ T + V
Sbjct: 555 DGEA---FEMNGTEDGRIIIDGANLTISNVTLEDQGVYSCVAQTALDSIAAGTQLTVLDV 611
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P P + + + S + W G + I+ Y I N E +E+ R
Sbjct: 612 PDPPENLHLSDRENRSVRLTWEAGDDHNSNISEYIIEFEGN-------KEEPGRWEELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G K ++ L P+ Y+F+V A NE+G EPS PS + TP P + P I
Sbjct: 665 VQG-KATTVILPLAPYVRYQFRVKAVNEVGKSEPSQPSDHHETPPAAPDKNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQA+N +G GPE VT++S ED P AP NST + VTW+PI +
Sbjct: 778 YAPYDVKVQAVNQLGSGPEPLSVTLYSGEDYPDTAPVIRGVDVINSTLVKVTWSPIP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNFLRFA-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + I ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEAYIFQTPEGVPEQ-PTFLKIIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +LS +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWRLSNLSATTKYKFYLRACTSKGCGK 1003
>gi|441665521|ref|XP_003264957.2| PREDICTED: neural cell adhesion molecule L1-like protein [Nomascus
leucogenys]
Length = 1171
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G N + C A+P+ W+K + GR+ I+ENG L I+ + DD+G YSC
Sbjct: 454 GYNAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEDDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GPE + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPEPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYVFQTPEGVPER-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ N+ I + + +LS +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNNINITTPSKPSWHLSNLSATTKYKFYLRACTSQGCGK 1019
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYNAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRQYHIYENGTLQINRTTEDDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GPE + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPEPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
+ FQ E
Sbjct: 924 V-FQTPE 929
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|444706384|gb|ELW47726.1| Contactin-2 [Tupaia chinensis]
Length = 1019
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 257/544 (47%), Gaps = 58/544 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEVVIPCEPRAAPKAIVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTGILSVRDA-TKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + ++ G L I NA G+Y C+ ++ V + + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRASVKETVGDLTILNAQLRHGGKYTCMAQTVVDSAAKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTLPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+V+A N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVLASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP---SEF 357
G+L+I+W G+ G R+P +++
Sbjct: 724 PGELTINWT----------------------------------GSAGWQTARVPGADAQY 749
Query: 358 Y---------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+ YT +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +N
Sbjct: 750 FVYSNESVRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGVSSSEMN 809
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
VTW P + ++ G L+G+ I+YWK + E A + A + GL P+TKY+V
Sbjct: 810 VTWEPGQ---QDTNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVT 866
Query: 469 VMAYNNAGEGPESERYLERTYR-KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V AYN AG GP S T + AP++PP + + +++ + W V E +
Sbjct: 867 VRAYNRAGTGPASPSANATTMKPPAPRRPPGNISWT-FSSSSLSIKWDPVVALRNESAVT 925
Query: 528 GYKV 531
GYK+
Sbjct: 926 GYKM 929
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
++P T + VK+ +YN G+GPES L + + P+ P+ V KG++ + ++VTW
Sbjct: 757 VRPYTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGVSSSEMNVTWE--- 813
Query: 519 PSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
P ++ ++GY++R W+ D A D + G A + L P +YH+ V A++
Sbjct: 814 PGQQDTNGILLGYEIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNR 872
Query: 577 GGDGRMSSPAITFQM 591
G G S A M
Sbjct: 873 AGTGPASPSANATTM 887
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + + NL C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDMEADIGANLHWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 254 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313
P++ +E K+ + N G G P S + + ++P AP+++ G +++++WEP +
Sbjct: 759 PYTPFEVKIRSYNRRGDG-PESLTALVYSAEEEPRVAPAKVWAKGVSSSEMNVTWEP-GQ 816
Query: 314 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
+ N + Y+I + K D E ++ ++ G A R+ T+Y V V+A N G
Sbjct: 817 QDTNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSA--RVSGLHPNTKYHVTVRAYNRAG 874
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S + + P G S F+S+++++ W+P+ +R + G+++ Y
Sbjct: 875 TGPASPSANATTMKPPAPRRPPGNISWTFSSSSLSIKWDPVVALRN--ESAVTGYKMLYQ 932
Query: 434 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
+ + T L T++NW I + V++ G+G +E ++ R
Sbjct: 933 NDFHLTPT----LHLTSKNWIEIPVPEDIGHALVQIRTTGPGGDGVPAEVHIVR 982
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + W+ +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVTLACRARASPPASYRWRMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|329663127|ref|NP_001192470.1| neural cell adhesion molecule L1-like protein precursor [Bos taurus]
Length = 1225
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 277/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR + ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + S P + L+L C + + L + W+ +G
Sbjct: 514 NAKGKTAVTANLDIRNATSLRVS-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + ++ T V V P
Sbjct: 573 EA---FEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNPIEL 416
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+ I
Sbjct: 794 YAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGV--DVINSTLVKVTWSTIP- 850
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+E + G L G+++ +WK +P+E + S R++ ++ L +++++ V
Sbjct: 851 -KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRDYGMVPSLDAFSEFHLTV 908
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 909 LAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGY 965
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + +++LS +Y + A ++ G G+
Sbjct: 966 LLQYQIINDTDEIGELNDINITTPSKPSWRLLNLSATTKYKFYLRACTSKGCGK 1019
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY+V W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ D +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 330 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGLP 386
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I N ++ +P G + TN Y+C + G I + V
Sbjct: 387 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434
>gi|296474989|tpg|DAA17104.1| TPA: cell adhesion molecule with homology to L1CAM (close homolog of
L1)-like [Bos taurus]
Length = 1225
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 277/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR + ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + S P + L+L C + + L + W+ +G
Sbjct: 514 NAKGKTAVTANLDIRNATSLRVS-PKNPRVPKSHTLELHCESQCDSHLKYSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + ++ T V V P
Sbjct: 573 EA---FEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNPIEL 416
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+ I
Sbjct: 794 YAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGV--DVINSTLVKVTWSTIP- 850
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+E + G L G+++ +WK +P+E + S R++ ++ L +++++ V
Sbjct: 851 -KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRDYGMVPSLDAFSEFHLTV 908
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 909 LAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGY 965
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + +++LS +Y + A ++ G G+
Sbjct: 966 LLQYQIINDTDEIGELNDINITTPSKPSWRLLNLSATTKYKFYLRACTSKGCGK 1019
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY+V W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ D +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 330 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGLP 386
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I N ++ +P G + TN Y+C + G I + V
Sbjct: 387 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEATNVHGTILANANIDV 434
>gi|432092485|gb|ELK25100.1| Contactin-3 [Myotis davidii]
Length = 1033
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 230/499 (46%), Gaps = 49/499 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P AAP+ WK+ + GR + G L I+ V++ D+G Y+C A N
Sbjct: 497 GSVVGLDCRPRAAPRAVCSWKRGEVTVREDGRISFLKEGGLSIANVTKADAGTYTCFAEN 556
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G RL+V P+ P + ++ ++ L C + LLDVA+ W NG
Sbjct: 557 QFGTANDSTRLVVTD-PTRITLAPSNMDVSVGESVVLPCQVRHDPLLDVAFTWYFNGALA 615
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + LE + G L+ I N G+Y CVV+S V +S+ ++V G PG P
Sbjct: 616 DFQKDGSHLEKVGGSSSGDLM-IRNIQLKHGGKYVCVVQSAVDSVSSAADLVVRGSPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G VQV E+ T+A + WT+G N PIT Y + ART ++ W + + + +D G
Sbjct: 675 GNVQVEEITDTTAQVSWTEGTDNHSPITSYSVQARTPFSVGW--QAARTVPEVID---GN 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N LG GEPS PS +
Sbjct: 730 THTATVVELNPWVEYEFRVVASNRLGGGEPSLPSEK------------------------ 765
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
P+P E QN Y + +R T + +T+ + V R S + Y+
Sbjct: 766 ------PVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDAPRYVFRNESIVPFAPYQ 818
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+ SAE+ P AP V++ +S+ I V+W+ I + G
Sbjct: 819 VKVGVYNNKGEGPFSPVATVLSAEEEPTAAPAHVWAHSLSSSEIEVSWSAIPWKLSS--G 876
Query: 424 RLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
L+G+ ++YW +E +P V R + GL+ Y+ V AYN+AG GP
Sbjct: 877 HLLGYEVRYWTSGEEGSPRRVKVVAGETVAR----LHGLKSHLVYHAAVRAYNSAGAGPF 932
Query: 481 SERYLERTYRKAPQKPPSA 499
S + T +K P+A
Sbjct: 933 SA-TVNATTKKTRSAQPAA 950
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + F G L I ++D+G Y C
Sbjct: 312 AAKGSTVRLECFALGNPVPRITWRRSDGRPFPRKINVRKF-GGVLEIPGFEQEDAGSYEC 370
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P ++ QL + A +L+ C A + +Y W N
Sbjct: 371 LAENSRGRNVARGRLTYYAKP-HWVQLIGDVEAAVEESLRWDCRAGGKP--KPSYRWLRN 427
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
G + L E I ++ G L I N S ADAG ++CV ++ G
Sbjct: 428 GEALA---LEE----RIQLENGALSIVNLSVADAGMFQCVAENKHG 466
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W ++G + R ++ ENG L I +S D+G++ C A N HG+ S
Sbjct: 412 CRAGGKPKPSYRWLRNGEALALEERIQL-ENGALSIVNLSVADAGMFQCVAENKHGLAYS 470
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + P + + A + W G + + E
Sbjct: 471 SAELRVLASAPDFSATPMRKLVRAQVGSVVGLDCRPRAAPRAVCSWKR-----GEVTVRE 525
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ +GG L I N + ADAG Y C ++ G + T ++V P
Sbjct: 526 DGRISFLKEGG-LSIANVTKADAGTYTCFAENQFGTANDSTRLVVTDP 572
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P Y VKV YNN GEGP S + + P P+ V ++ + + V+W +
Sbjct: 813 PFAPYQVKVGVYNNKGEGPFSPVATVLSAEEEPTAAPAHVWAHSLSSSEIEVSWSAIPWK 872
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY+VR W ++ S ++ G T+ A + L YH V A+++ G G
Sbjct: 873 LSSGHLLGYEVRYWTSGEEGSPRRVKVV-AGETV-ARLHGLKSHLVYHAAVRAYNSAGAG 930
Query: 581 RMSS 584
S+
Sbjct: 931 PFSA 934
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
E VT C P P++ W+ +G+ I + NG ++I+P DSG Y C
Sbjct: 115 EDKRVTFKCEARGNPSPQYRWQLNGSDINLAVESRYELNGGDLVVINPHRDRDSGSYQCF 174
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 175 ATNPLGTIVSREAKLQFAYLENFKTRMRSAVSVREGQGVVLLCGPPPHSGEL---SYAWI 231
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ + G L + +D G Y CVV S V
Sbjct: 232 FNEY---PSFVEEDGRRFISQETGHLYVAKVEPSDVGNYTCVVTSVV 275
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + GRR I E G+L ++ V D G Y+
Sbjct: 209 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDGRRFISQETGHLYVAKVEPSDVGNYT 268
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T+V G L + P Q P + A ++L C A
Sbjct: 269 CVVTSVVTAARVLGSPTPLMLRADGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNP 328
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + W + R +N + GG+LEI DAG YEC+ +++ G+
Sbjct: 329 VPRIT--WRRSDGRPFPRKIN------VRKFGGVLEIPGFEQEDAGSYECLAENSRGR 378
>gi|224066631|ref|XP_002186633.1| PREDICTED: neural cell adhesion molecule L1-like protein [Taeniopygia
guttata]
Length = 1225
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 285/596 (47%), Gaps = 43/596 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C+ A+P W KD +I S ++ +NG L I ++DSG Y+C A+
Sbjct: 454 GYSAFLHCDIFASPAADVRWTKDDSIEPLSTFHYELNKNGTLEIRDAKKEDSGSYACWAS 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNG 121
N G L + P + ++ L+C A + L ++ W +G
Sbjct: 514 NSVGKRAITANLDIRDATKLV-VTPKNPRVLKSHSILLKCQAEYDSHLKHSFKLSWRKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ +N E I +D L I++ D G Y CV + + +T +IV P
Sbjct: 573 ---DELPVNSTEGGRIILDRDTLFISSVLLEDQGVYRCVASTALDSAEAETQLIVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDR 239
P +Q+ E S + W GA++ P+ I N W W +E+ R
Sbjct: 630 PPEDLQLSENQNRSVRLSWKAGASHNSPVNESIIEFEENRWEPERW---------QELSR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G ++ + L P+ Y+F+V++ N +G +PS+PS +Y TP P + P I
Sbjct: 681 VPGNDTTALLS-LAPYVNYQFRVVSVNAVGRSQPSTPSLRYATPPAAPDKNPENIRVEAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ + WEPL ++N P + YK+ WR++ +T++ E +K++ ++V +P+
Sbjct: 740 EPNEMVMKWEPLKPMERNGPGLEYKVSWRQRGVETDWNEELVKKH---SLSVRNVPT--- 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+KVQA+N++G GPE + +S ED+P AP GV NST + V W I R
Sbjct: 794 FVPYEIKVQAVNNLGSGPEPNITIGYSGEDVPDAAPSGVSVEVVNSTLVKVFWFGIP--R 851
Query: 419 ENIRGRLIGHRIKYW--------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+ +RG L G+++ +W K +PE+ + ++ RN +I GL+P +++++ V+
Sbjct: 852 DRVRGHLRGYKVSWWKTRSMLDGKRHHPEKHFLTFVG--DRNSGMIPGLEPFSEFHLTVL 909
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A+N+ G+GPES + T P++ P + I + +V ++W P + GY
Sbjct: 910 AFNSRGDGPESSPVVFETPEGVPEQ-PRFLRILNFDKDSVTLSWGL--PKKANGHLTGYI 966
Query: 531 VRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ +++ ++ ++ I + L + LSP +Y + A + G G+ ++
Sbjct: 967 LQYQIINETHEVGAVSNVSIANHSALSWRLAGLSPSTKYKFYIKACTAKGCGKAAT 1022
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 234/609 (38%), Gaps = 72/609 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C P+P WK +G I R + ++ + DS ++ C ATN
Sbjct: 362 GANLVLLCEAIGNPEPSIQWKLNGMPIDGRTFRGRVSTREISLTNLQLQDSAVFQCEATN 421
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYI 116
HG + + VL+ + P I N L C DV
Sbjct: 422 KHGTILASANVNVLN-------IAPLILTPDEENYATVVGYSAFLHCDIFASPAADVR-- 472
Query: 117 WTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
WT + + L T + ++ G LEI +A D+G Y C ++VGK + +
Sbjct: 473 WTKDD------SIEPLSTFHYELNKNGTLEIRDAKKEDSGSYACWASNSVGKRAITANLD 526
Query: 176 VEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNWNSTWFNVSE- 230
+ L P +V++ H Q A + H +K+ R + + N +E
Sbjct: 527 IRDATKLVVTPKNPRVLKSHSILLKCQ----AEYDSHLKHSFKLSWRKDGDELPVNSTEG 582
Query: 231 -HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+I +DR T I +VL+ ++ +A L E + + P
Sbjct: 583 GRII---LDRDT----LFISSVLLE-DQGVYRCVASTALDSAEAETQLIVLDVP-----D 629
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
P + + + +SW+ N+P N F + + E E + GN
Sbjct: 630 PPEDLQLSENQNRSVRLSWKA--GASHNSPVNESIIEFEENRWEPERWQELSRVPGNDTT 687
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
A++ + Y Y+ +V ++N VG P + + + P P+ + +
Sbjct: 688 ALLSLAP---YVNYQFRVVSVNAVGRSQPSTPSLRYATPPAAPDKNPENIRVEASEPNEM 744
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPE----ETAVYYLSRTTRNWALIVGLQPDT 463
+ W P++ + N G + +++ W++ E E V S + RN V
Sbjct: 745 VMKWEPLKPMERN--GPGLEYKVS-WRQRGVETDWNEELVKKHSLSVRNVPTFV------ 795
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A NN G GPE + + P PS V ++ +N T V V W +
Sbjct: 796 PYEIKVQAVNNLGSGPEPNITIGYSGEDVPDAAPSGVSVEVVNSTLVKVFWFGIPRDRVR 855
Query: 524 EPIIGYKVRVWEVDQ--DMSRAN---DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GYKV W+ D R + + VG+ I L P +H+ VLAF++ G
Sbjct: 856 GHLRGYKVSWWKTRSMLDGKRHHPEKHFLTFVGDRNSGMIPGLEPFSEFHLTVLAFNSRG 915
Query: 579 DGRMSSPAI 587
DG SSP +
Sbjct: 916 DGPESSPVV 924
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 53 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
+DSG + T + + E K +L++ P +T+ L L C A
Sbjct: 232 NDSGSPNAAVTKANFIKERKPKLLI---PPESAGSSSSVTVIKGGVLLLECIAEGLPTPH 288
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
++++ GNM +E ET N G +L+I + AD G Y+C + +G+ +
Sbjct: 289 LSWVKV-----TGNMPKDEPETENF---GKMLKIDQVTAADEGTYQCTASNPMGRARHEF 340
Query: 173 TVIVEGPP 180
V VE PP
Sbjct: 341 HVRVEEPP 348
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 15/176 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCT 61
+GG + + C E P P W K GN+ + F G +L I V+ D G Y CT
Sbjct: 271 KGGVLLLECIAEGLPTPHLSWVKVTGNMPKDEPETENF--GKMLKIDQVTAADEGTYQCT 328
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A+N G + + V P + ++ P + NL L C A + + W NG
Sbjct: 329 ASNPMGRARHEFHVRVEEPPQWLKK-PEGGVYSVGANLVLLCEAIGNP--EPSIQWKLNG 385
Query: 122 VRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I G + T I+ +TN D+ ++C + G I V V
Sbjct: 386 MPIDGRTFRGRVSTREIS-------LTNLQLQDSAVFQCEATNKHGTILASANVNV 434
>gi|297670836|ref|XP_002813560.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
protein-like [Pongo abelii]
Length = 1225
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GR+ I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRQYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKNSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ +Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVSYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +LS +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLSATTKYKFYLRACTSQGCGK 1019
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTEDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRQYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKNSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVSYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C E P P+ W K G + G K L I VS D G Y CTA+N G
Sbjct: 278 CFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTASNFLGTATH 337
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
+IV P + ++ P + N L C A E + W NG I N
Sbjct: 338 DFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSPIDN 389
>gi|195480086|ref|XP_002101132.1| GE15791 [Drosophila yakuba]
gi|194188656|gb|EDX02240.1| GE15791 [Drosophila yakuba]
Length = 1239
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 267/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRSSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTIELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ S+W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPSSWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGNEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIN+ G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINERGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSAYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K + +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWSENEGEEGLREIHVKGDAHNALVTQFKPDSKNFARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R +D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREHDPHITDPRITHMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW +DG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSRDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRSSNW 471
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 28/246 (11%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG-GKIGDLSISWEPLPREKQ 316
Y KV+A NE G ++ + D+P AP+ ++W P+ E
Sbjct: 786 YLIKVVAINERGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSAYMAWTPVSEESV 845
Query: 317 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVGPG 375
YKI +N+ E E L+E G A + ++F ++ ++ A N G
Sbjct: 846 RGHFKGYKIQTWSENEGE---EGLREIHVKGDAHNALVTQFKPDSKNFARILAYNGRFNG 902
Query: 376 PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 435
P S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 903 PPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY--- 954
Query: 436 DNPEETAVYYLSRTTRNWALI----------VGLQPDTKYYVKVMAYNNAGEGPESERYL 485
EE Y+ + I GL+P++KY + + A GEG SE Y+
Sbjct: 955 ---EEVKESYVGERREHDPHITDPRITHMKMAGLKPNSKYRISITATTKMGEG--SEHYI 1009
Query: 486 ERTYRK 491
E+T K
Sbjct: 1010 EKTTLK 1015
>gi|426339216|ref|XP_004033554.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Gorilla gorilla gorilla]
Length = 1171
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 274/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRW---------DELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW V + GY++ W+
Sbjct: 808 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|114585164|ref|XP_001136570.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Pan troglodytes]
Length = 1209
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS ++ TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGV--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 123/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY++
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|114585162|ref|XP_001136954.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 6
[Pan troglodytes]
gi|410288982|gb|JAA23091.1| cell adhesion molecule with homology to L1CAM (close homolog of L1)
[Pan troglodytes]
Length = 1225
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS ++ TP P + P I
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGV--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 123/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|426339212|ref|XP_004033552.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Gorilla gorilla gorilla]
Length = 1209
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 274/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRW---------DELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 679 FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 738
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 739 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 791
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW V + GY++ W+
Sbjct: 792 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWK 851
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P I FQ
Sbjct: 852 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 910
Query: 591 MGE 593
E
Sbjct: 911 TPE 913
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|426339214|ref|XP_004033553.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Gorilla gorilla gorilla]
Length = 1225
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 274/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKSHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSDISEYIVEFEGNKEEPGRW---------DELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW V + GY++ W+
Sbjct: 808 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|27894376|ref|NP_006605.2| neural cell adhesion molecule L1-like protein isoform 1 precursor
[Homo sapiens]
Length = 1224
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|6760654|gb|AAC28614.2| neuroglian [Drosophila melanogaster]
Length = 1302
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|2190958|gb|AAB60937.1| neural cell adhesion molecule [Homo sapiens]
Length = 1224
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|193785234|dbj|BAG54387.1| unnamed protein product [Homo sapiens]
Length = 1113
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 ---EAFEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|119584273|gb|EAW63869.1| cell adhesion molecule with homology to L1CAM (close homolog of L1),
isoform CRA_b [Homo sapiens]
Length = 1224
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|195355114|ref|XP_002044038.1| GM21680 [Drosophila sechellia]
gi|194129291|gb|EDW51334.1| GM21680 [Drosophila sechellia]
Length = 1305
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
>gi|358438315|ref|NP_001240317.1| neural cell adhesion molecule L1-like protein isoform 3 precursor
[Homo sapiens]
Length = 1171
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|24640619|ref|NP_727274.1| neuroglian, isoform B [Drosophila melanogaster]
gi|281360615|ref|NP_001162705.1| neuroglian, isoform E [Drosophila melanogaster]
gi|442615514|ref|NP_001259337.1| neuroglian, isoform I [Drosophila melanogaster]
gi|14286138|sp|P20241.2|NRG_DROME RecName: Full=Neuroglian; Flags: Precursor
gi|22831957|gb|AAN09236.1| neuroglian, isoform B [Drosophila melanogaster]
gi|272506037|gb|ACZ95240.1| neuroglian, isoform E [Drosophila melanogaster]
gi|440216538|gb|AGB95181.1| neuroglian, isoform I [Drosophila melanogaster]
Length = 1302
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|397522463|ref|XP_003831286.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Pan paniscus]
Length = 1171
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS ++ TP P + P I
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G+++ +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGV--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY+V
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQV 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + +Q P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKQ-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|397522459|ref|XP_003831284.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Pan paniscus]
Length = 1209
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS ++ TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G+++ +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGV--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY+V
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQV 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + +Q P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKQ-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|62088238|dbj|BAD92566.1| Neural cell adhesion molecule variant [Homo sapiens]
Length = 1210
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 440 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 499
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 500 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 558
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 559 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 615
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 616 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 666
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 667 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 725
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 726 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 779
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 780 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 837
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 838 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 896
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 897 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 953
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 954 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1005
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 347 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 405
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 406 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 458
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 459 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 514
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 515 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 565
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 566 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 620
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 621 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 680
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 681 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 736
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 737 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 789
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 790 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 849
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 850 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 909
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 910 I-FQTPE 915
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 256 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTAS 315
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 316 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 372
Query: 124 IGN 126
+ N
Sbjct: 373 VDN 375
>gi|397522461|ref|XP_003831285.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Pan paniscus]
Length = 1225
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS ++ TP P + P I
Sbjct: 681 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G+++ +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGV--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 529 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 635 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 ----FVRYQFRVIAVNEVGRSQPSQPSDRHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW + + GY+V
Sbjct: 804 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQV 863
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + +Q P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKQ-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
+ N
Sbjct: 387 VDN 389
>gi|194769812|ref|XP_001966995.1| GF21814 [Drosophila ananassae]
gi|190622790|gb|EDV38314.1| GF21814 [Drosophila ananassae]
Length = 1407
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 162/584 (27%), Positives = 264/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVT+ C E APKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTMTCRVEGAPKPLVKWLRGSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAE 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + G L+V + Q P +AA ++ RC+ ++ LD+ W +G
Sbjct: 504 NKFGNKSADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLDIQIDWRKDGQP 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + K +IV+ P P
Sbjct: 563 I---DF-ETQPRFVQTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V +
Sbjct: 619 KLLGIT-CQADKAEISWEPQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDF----- 672
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
S + PW+ Y F+VIA N++G PS+ S T D PY+ P + G G +
Sbjct: 673 ----SFVVQMSPWANYTFRVIAFNKIGPSPPSAHSESCTTQPDVPYKNPDNVVGQGREPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAP Y++ W++ ++++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPGFQYRVNWKRDIPAAPWENQNIYDWRQNNIVITDQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIN+ G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINEKGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E EE + + AL+ +PD+K + +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTEKEGEEGLREIHVKGDTHNALVTQFKPDSKNFARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + +TW+ P + + GYK+ EV
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFWLTWK--KPLYPNGKLTGYKIYYEEVQGS 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 11/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILEVNSVPYFTKEPEIKVAAEDEEVTFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTITIINLVKGDTGNYGCNATNSLGYVYRDVYLNVQA 429
Query: 179 PP 180
P
Sbjct: 430 LP 431
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 34/245 (13%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A NE G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINEKGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDV 372
YKI W +K E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTEKEG----EEGLREIHVKGDTHNALVTQFKPDSKNFARILAYNGR 899
Query: 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PI---------ELIRENIR 422
GP S V+ + E +P QG+ + S+A +TW P+ ++ E ++
Sbjct: 900 FNGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFWLTWKKPLYPNGKLTGYKIYYEEVQ 958
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
G +G R +Y +P T R TR + GL+P++KY + + A GEG SE
Sbjct: 959 GSYVGERREY----DPHITD----PRVTR--MKMAGLKPNSKYRISITATTKMGEG--SE 1006
Query: 483 RYLER 487
Y+E+
Sbjct: 1007 HYIEK 1011
>gi|17530861|ref|NP_511090.1| neuroglian, isoform A [Drosophila melanogaster]
gi|45554534|ref|NP_996380.1| neuroglian, isoform C [Drosophila melanogaster]
gi|281360613|ref|NP_001162704.1| neuroglian, isoform D [Drosophila melanogaster]
gi|281360617|ref|NP_001162706.1| neuroglian, isoform F [Drosophila melanogaster]
gi|442615512|ref|NP_001259336.1| neuroglian, isoform H [Drosophila melanogaster]
gi|6760659|gb|AAA28728.2| neuroglian precursor [Drosophila melanogaster]
gi|7290947|gb|AAF46387.1| neuroglian, isoform A [Drosophila melanogaster]
gi|16182525|gb|AAL13513.1| GH03573p [Drosophila melanogaster]
gi|45446861|gb|AAS65287.1| neuroglian, isoform C [Drosophila melanogaster]
gi|272506036|gb|ACZ95239.1| neuroglian, isoform D [Drosophila melanogaster]
gi|272506038|gb|ACZ95241.1| neuroglian, isoform F [Drosophila melanogaster]
gi|440216537|gb|AGB95180.1| neuroglian, isoform H [Drosophila melanogaster]
Length = 1239
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|224586970|gb|ACN58584.1| RT01988p [Drosophila melanogaster]
Length = 1108
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 422 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 480
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 481 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 539
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 540 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 595
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 596 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 645
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 646 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 705
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 706 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 762
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 763 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 820
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 821 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 880
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 881 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 937
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 938 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 981
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 327 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 385
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 386 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 445
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 446 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 496
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 497 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 551
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 552 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 595
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 596 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 640
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 641 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 698
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 699 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 752
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 753 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 812
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 813 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 871
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 872 AY----NGRFNGP 880
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 235 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 294
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 295 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 352
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 353 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 406
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 407 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 448
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 763 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 820
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 821 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 877
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 878 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 931
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 932 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 982
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 983 EHYIEKTTLK 992
>gi|194891060|ref|XP_001977430.1| GG18259 [Drosophila erecta]
gi|190649079|gb|EDV46357.1| GG18259 [Drosophila erecta]
Length = 1239
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRSSNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-ETQPRFVKANDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K + +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNFARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLQWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTIAEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRSSNW 471
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNFARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLQWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|358438179|ref|NP_001240316.1| neural cell adhesion molecule L1-like protein isoform 2 precursor
[Homo sapiens]
gi|317373561|sp|O00533.4|CHL1_HUMAN RecName: Full=Neural cell adhesion molecule L1-like protein; AltName:
Full=Close homolog of L1; Contains: RecName:
Full=Processed neural cell adhesion molecule L1-like
protein; Flags: Precursor
Length = 1208
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|386764048|ref|NP_001245581.1| neuroglian, isoform G [Drosophila melanogaster]
gi|383293281|gb|AFH07295.1| neuroglian, isoform G [Drosophila melanogaster]
Length = 1309
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|85397970|gb|AAI04919.1| CHL1 protein [Homo sapiens]
gi|168277596|dbj|BAG10776.1| neural cell adhesion molecule L1-like protein precursor [synthetic
construct]
gi|219520164|gb|AAI43497.1| CHL1 protein [Homo sapiens]
Length = 1208
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGREAKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
>gi|440900721|gb|ELR51796.1| Neural cell adhesion molecule L1-like protein, partial [Bos grunniens
mutus]
Length = 1210
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 282/597 (47%), Gaps = 51/597 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR + ENG L I+ + +D+G YSC
Sbjct: 439 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGRRYHVHENGTLQITETTEEDAGSYSCWVE 498
Query: 64 NVHGMDESKGRLIVLHGPSYY-----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
N G L + + + ++P T+ H + +C +H + L ++ W+
Sbjct: 499 NAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WS 554
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G ++N E I IDG L I+N + D G Y C + + ++ T V V
Sbjct: 555 KDGEA---FEMNGTEDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSVADMTQVTVLD 611
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P + + E S + W G + I+ Y + N W +E
Sbjct: 612 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EE 662
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 663 LTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRV 721
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 355
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 722 QASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 775
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNP 413
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+
Sbjct: 776 PAVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDAAPVIQGV--DVINSTLVKVTWST 833
Query: 414 IELIRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
I +E + G L G+++ +WK +P+E + S R++ ++ L ++++
Sbjct: 834 IP--KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRDYGMVPSLDAFSEFH 890
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ V+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P +
Sbjct: 891 LTVLAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNL 947
Query: 527 IGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
GY ++ ++ ++ ND I + +++LS +Y + A ++ G G+
Sbjct: 948 TGYLLQYQIINDTDEIGELNDINITTPSKPSWRLLNLSATTKYKFYLRACTSKGCGK 1004
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 680 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 739
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 740 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 792
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY+V W+
Sbjct: 793 GSGPEPQSVILYSGEDYPDAAPVIQGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWWK 852
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ D +V L +H+ VLA+++ G G S P I FQ
Sbjct: 853 TKSLLDGRTHPKEVNILRFSGQRDYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 911
Query: 591 MGE 593
E
Sbjct: 912 TPE 914
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 10/174 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 255 KGDTLLLECFAEGLPTPQVDWNKMGGDLPKGRETKENYGKTLKIENVSSQDKGTYRCTAS 314
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G + + + P ++ + P + + L C A E + W NG+
Sbjct: 315 NVLG-SATHDFQVTVEEPPHWTKKPQSGVYSTGSSGILLCEAEGEP--EPTIKWRVNGLP 371
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I N ++ +P G + TN Y+C + G I + V
Sbjct: 372 IERNPYSGDVMSP------GEISFTNVQPNHTAVYQCEASNVHGTILANANIDV 419
>gi|6760653|gb|AAC28613.2| neuroglian [Drosophila melanogaster]
Length = 1239
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>gi|327266144|ref|XP_003217866.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Anolis carolinensis]
Length = 1214
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 246/515 (47%), Gaps = 37/515 (7%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
++C+ A P P W KD ++ R NG L I ++D+G Y+C N+ G
Sbjct: 454 LYCHFFAVPLPDVSWTKDDSM----KRLDADLNGTLEIRETRKEDAGFYTCVVKNIAGRR 509
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC-SAHTEELLDVAYI-WTHNGVRIGNM 127
L V + +P + + LRC S + L D I W +G IG
Sbjct: 510 ALTATLTVRDA-TKISVVPKNPQVLKDHPVLLRCHSEYDPHLKDHFQISWRKDGEEIGKN 568
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
D +E I ++G L I N D G Y C+ +++ + + + V P P +
Sbjct: 569 DTDE---ERIIMEGDTLFIQNVELEDQGVYTCIGSTSLDTTADDSRITVIDVPDSPQDLY 625
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEVDRYTGRKE 245
+ E S + W G +N PI + + N W W +E+ R G
Sbjct: 626 ISEKRNRSVRLSWNAGNSNNSPINEFIVEFEENRWEPRKW---------RELIRVPGNDT 676
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
++ LVP+ Y+F+VI+ N +G +PS S +Y TP P + P I K +++
Sbjct: 677 TAVLP-LVPYVNYQFRVISVNAVGRSQPSETSERYETPPAAPDKNPENIRVETSKPHEMN 735
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
++WEPL + N P + YK+ WR+++ E++ ET++++ + + P+ + Y++K
Sbjct: 736 MTWEPLKPMEHNGPGLEYKVNWRQQDVAEWEEETVQKH---FLVLQNTPT---FVPYDIK 789
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+N++G GPE +V+T +S+ED+P+ AP V + NST W+ I ++ +RG L
Sbjct: 790 VQAMNNLGSGPEPDVITGYSSEDIPEAAPSDVIVQVINSTLAKAIWSTIP--KDRVRGHL 847
Query: 426 IGHRIKYWK------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+++ +WK E + L R+ +I GL P ++Y + V AYN+ G GP
Sbjct: 848 KGYKVNWWKIRSRLGEKSHRLDKRALLFNADRHDGMIPGLDPFSEYRLTVSAYNSKGTGP 907
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
ES Y +T P+K P + I + +V ++W
Sbjct: 908 ESLTYEFQTPEGVPEK-PHFLKILNFDKDSVTLSW 941
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 134/599 (22%), Positives = 233/599 (38%), Gaps = 71/599 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
GG+ C P+P WK++G + + R +F + I+ + +DS +Y C AT
Sbjct: 356 GGSFVRLCEAVGDPEPTIKWKRNGVPLTETKTSRAVFSTREISITDLVLNDSAVYQCEAT 415
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N HG + + VL P E L P + + +L C L DV++ +
Sbjct: 416 NKHGTILATANIDVLEIPP--EILTPDGEEYVVVVGYPSRLYCHFFAVPLPDVSWTKDDS 473
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
R+ + DLN G LEI DAG Y CVVK+ G+ + T+ V
Sbjct: 474 MKRL-DADLN-----------GTLEIRETRKEDAGFYTCVVKNIAGRRALTATLTVRDAT 521
Query: 181 GL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P QV++ H R + Y + ++ +W E +
Sbjct: 522 KISVVPKNPQVLKDHPVLL-----------RCHSEYDPHLKDHFQISWRKDGEEI----- 565
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELG-YGEPSSPSPQYNTPADKPY-------Q 289
G+ + E +++ T + + + G Y S S +T AD
Sbjct: 566 ----GKNDTDEERIIMEGDTLFIQNVELEDQGVYTCIGSTS--LDTTADDSRITVIDVPD 619
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDTEFQSETLKEYGNVGI 348
+P + + + +SW N+P N + F + + E ++ GN
Sbjct: 620 SPQDLYISEKRNRSVRLSWN--AGNSNNSPINEFIVEFEENRWEPRKWRELIRVPGNDTT 677
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAI 407
AV+ + Y Y+ +V ++N VG SE + + P P+ + +
Sbjct: 678 AVLPL---VPYVNYQFRVISVNAVGRSQPSETSERYETPPAAPDKNPENIRVETSKPHEM 734
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYY 466
N+TW P++ + N G + +++ + ++D E + T + L++ P Y
Sbjct: 735 NMTWEPLKPMEHN--GPGLEYKVNWRQQDVAE-----WEEETVQKHFLVLQNTPTFVPYD 787
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+KV A NN G GPE + + P+ PS V ++ IN T W + +
Sbjct: 788 IKVQAMNNLGSGPEPDVITGYSSEDIPEAAPSDVIVQVINSTLAKAIWSTIPKDRVRGHL 847
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-----LSPGKRYHMRVLAFSNGGDG 580
GYKV W++ + + + +AD D L P Y + V A+++ G G
Sbjct: 848 KGYKVNWWKIRSRLGEKSHRLDKRALLFNADRHDGMIPGLDPFSEYRLTVSAYNSKGTG 906
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 18/194 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCT 61
+G ++ + C E P P W + DG + G I G LL I V+ +D+GIY C
Sbjct: 266 KGTDLLLECIAEGLPTPHLNWARVDGVTVHRGS---IENYGKLLKIEQVTAEDAGIYECI 322
Query: 62 ATNVHGMDESKGRLIV-LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G E++ V + P + P + + C A + + W N
Sbjct: 323 ARNALG--ETRHEFHVGVEEPPMWVIKPESGVFSVGGSFVRLCEAVGDPEPTIK--WKRN 378
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179
GV L E +T + IT+ D+ Y+C + G I +T ++E P
Sbjct: 379 GV-----PLTETKTSRAVFSTREISITDLVLNDSAVYQCEATNKHGTILATANIDVLEIP 433
Query: 180 PGL--PGGVQVVEV 191
P + P G + V V
Sbjct: 434 PEILTPDGEEYVVV 447
>gi|403309235|ref|XP_003945024.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Saimiri boliviensis boliviensis]
Length = 1225
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 279/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTH 119
N G L + + + P I L+L +C AH + L ++ W+
Sbjct: 514 NSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSK 570
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G ++N E I IDG L I+N + D G Y C + + + T V V
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDV 627
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EV 237
P P + + E S + W G + I+ Y + F ++ +G+ E+
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRWEEL 678
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 679 TRVQGKKTTVIL-PLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQ 737
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 791
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I
Sbjct: 792 AVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP- 850
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + GRL G++I +WK +P+E + S RN ++ L +++++ V
Sbjct: 851 -KDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFS-GQRNSGMVPSLDAFSEFHLTV 908
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 909 LAYNSKGAGPESEPYVFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGY 965
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ RY + A ++ G G+
Sbjct: 966 LLQYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTRYKFYLRACTSKGCGK 1019
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW + + GY++ W+
Sbjct: 808 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P + FQ
Sbjct: 868 TKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYV-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTAT
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAT 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|26333963|dbj|BAC30699.1| unnamed protein product [Mus musculus]
Length = 1150
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 241/522 (46%), Gaps = 35/522 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D G R ENG L I + +D+G YSC
Sbjct: 454 GYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVD 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAMGKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++++ S KT V V G P
Sbjct: 573 ---EAFEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 681 VQG-EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I WEPL +QN P + YK+ W+ + E E + V +R+ + Y
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVY 794
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y+VKVQAIN +G P+ + VT++S ED P AP NST + VTW+ I +E
Sbjct: 795 APYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIP--KE 852
Query: 420 NIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G L G++I +WK +P+E + S RN ++ L P +++++ V+AY
Sbjct: 853 TVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDPFSEFHLTVLAY 911
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
N+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 912 NSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 952
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP----QGVFSRGFNSTAINVTWNPI 414
Y Y+ +V A+N+VG S + P AP Q + + + + W P+
Sbjct: 695 YVRYQFRVTAVNEVG---RSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 751
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + +N G + +++ + + PEE ++ T P Y VKV A N
Sbjct: 752 KSMEQN--GPGLEYKVSWKPQGAPEEWEEEIVTNHTLRVMTPTVYAP---YDVKVQAINQ 806
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P+ + + P P + +N T V VTW + + GY++ W
Sbjct: 807 LGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 866
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 867 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYI-F 925
Query: 590 QMGE 593
Q E
Sbjct: 926 QTPE 929
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 270 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 330 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 386
Query: 124 I 124
I
Sbjct: 387 I 387
>gi|410951587|ref|XP_003982476.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
protein-like [Felis catus]
Length = 1208
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 276/593 (46%), Gaps = 43/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I ENG L I+ + DD+G YSC
Sbjct: 437 GYSAFLHCEYFASPEAIVSWQKVDEAKPLEGRRYHIHENGTLQINKTTEDDAGSYSCWVE 496
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELL--DVAYIWTHN 120
N G L + + Q+ PK + L+L C + + L + W+ N
Sbjct: 497 NAKGKTAVTANLDIRNATKL--QVSPKNPRVPKLHTLELHCESKCDPYLKHSLKLSWSKN 554
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G ++N E I IDG L I+N + D G Y C ++ + ++ T V + P
Sbjct: 555 G---EGFEINATEDGRIIIDGPNLTISNVTSEDQGIYSCSAQTALDSVADVTHVTILDVP 611
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVD 238
P + + E S + W G + I+ Y + N W +E+
Sbjct: 612 DPPENLHLSERQNRSVRLTWDAGNDHNSRISEYIVEFEGNKEEPGRW---------EELT 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R G++ ++ + L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 663 RVQGKETTALLS-LAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQA 721
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 357
+ ++ I WEPL +QN P + Y++ W+ + E + ET+ + +R+ +
Sbjct: 722 SQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEXEEETVTNH------TLRVMTPT 775
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+V+VQA+N +G GPE + V ++S ED P AP NST + V+W+ I
Sbjct: 776 VYAPYDVQVQAVNHLGSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVSWSTIP-- 833
Query: 418 RENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
++ + G L G++I +WK +P+E + S RN+ ++ L +++++ V+
Sbjct: 834 KDRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFHLTVL 892
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
AYN+ G GPESE Y+ +T P++ P+ + I ++ T +TW P + GY
Sbjct: 893 AYNSKGAGPESEPYIFQTPEGVPEQ-PAFLKIIKVDKDTATLTWGL--PKKLNGNLTGYL 949
Query: 531 VRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 950 LQYQIINDTYELGELNDINITTPSKPSWRLSNLNSTTKYKFYLRACTSKGCGK 1002
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 678 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 737
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V T N L V + P Y V+V A N+
Sbjct: 738 EQN--GPGLEYRVT-WK---PQGAPVEXEEETVTNHTLRV-MTPTVYAPYDVQVQAVNHL 790
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V V+W + + GY++ W+
Sbjct: 791 GSGPEPQSVILYSGEDYPDTAPVIHGVDVINSTLVKVSWSTIPKDRVHGHLKGYQINWWK 850
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 851 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 909
Query: 591 MGE 593
E
Sbjct: 910 TPE 912
>gi|110347545|ref|NP_031723.2| neural cell adhesion molecule L1-like protein precursor [Mus
musculus]
gi|408360031|sp|P70232.2|CHL1_MOUSE RecName: Full=Neural cell adhesion molecule L1-like protein;
AltName: Full=Cell adhesion molecule with homology to
L1CAM; AltName: Full=Chl1-like protein; AltName:
Full=Close homolog of L1; Contains: RecName:
Full=Processed neural cell adhesion molecule L1-like
protein; Flags: Precursor
gi|124297745|gb|AAI31672.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
gi|124297981|gb|AAI31671.1| Cell adhesion molecule with homology to L1CAM [Mus musculus]
gi|148666972|gb|EDK99388.1| cell adhesion molecule with homology to L1CAM, isoform CRA_a [Mus
musculus]
Length = 1209
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 241/522 (46%), Gaps = 35/522 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D G R ENG L I + +D+G YSC
Sbjct: 438 GYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVD 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAMGKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++++ S KT V V G P
Sbjct: 557 EA---FEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG + + E S + W G + I+ Y + N W +E+ R
Sbjct: 614 PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 665 VQG-EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I WEPL +QN P + YK+ W+ + E E + V +R+ + Y
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVY 778
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y+VKVQAIN +G P+ + VT++S ED P AP NST + VTW+ I +E
Sbjct: 779 APYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIP--KE 836
Query: 420 NIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G L G++I +WK +P+E + S RN ++ L P +++++ V+AY
Sbjct: 837 TVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDPFSEFHLTVLAY 895
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
N+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 896 NSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 936
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP----QGVFSRGFNSTAINVTWNPI 414
Y Y+ +V A+N+VG S + P AP Q + + + + W P+
Sbjct: 679 YVRYQFRVTAVNEVG---RSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 735
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + +N G + +++ + + PEE ++ T P Y VKV A N
Sbjct: 736 KSMEQN--GPGLEYKVSWKPQGAPEEWEEEIVTNHTLRVMTPTVYAP---YDVKVQAINQ 790
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P+ + + P P + +N T V VTW + + GY++ W
Sbjct: 791 LGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 850
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 851 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYI-F 909
Query: 590 QMGE 593
Q E
Sbjct: 910 QTPE 913
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 314 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 370
Query: 124 I 124
I
Sbjct: 371 I 371
>gi|403309237|ref|XP_003945025.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Saimiri boliviensis boliviensis]
Length = 1171
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 279/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTH 119
N G L + + + P I L+L +C AH + L ++ W+
Sbjct: 514 NSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSK 570
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G ++N E I IDG L I+N + D G Y C + + + T V V
Sbjct: 571 DGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDV 627
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EV 237
P P + + E S + W G + I+ Y + F ++ +G+ E+
Sbjct: 628 PDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRWEEL 678
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 679 TRVQGKKTTVIL-PLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQ 737
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 738 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 791
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I
Sbjct: 792 AVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP- 850
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + GRL G++I +WK +P+E + S RN ++ L +++++ V
Sbjct: 851 -KDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFS-GQRNSGMVPSLDAFSEFHLTV 908
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 909 LAYNSKGAGPESEPYVFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGY 965
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ RY + A ++ G G+
Sbjct: 966 LLQYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTRYKFYLRACTSKGCGK 1019
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW + + GY++ W+
Sbjct: 808 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P + FQ
Sbjct: 868 TKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYV-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTAT
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAT 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|403309233|ref|XP_003945023.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Saimiri boliviensis boliviensis]
Length = 1209
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 279/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCKFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTH 119
N G L + + + P I L+L +C AH + L ++ W+
Sbjct: 498 NSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSK 554
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G ++N E I IDG L I+N + D G Y C + + + T V V
Sbjct: 555 DGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDV 611
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EV 237
P P + + E S + W G + I+ Y + F ++ +G+ E+
Sbjct: 612 PDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIV---------EFEGNKEELGRWEEL 662
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 663 TRVQGKKTTVIL-PLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQ 721
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 722 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 775
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I
Sbjct: 776 AVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP- 834
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + GRL G++I +WK +P+E + S RN ++ L +++++ V
Sbjct: 835 -KDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILKFS-GQRNSGMVPSLDAFSEFHLTV 892
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 893 LAYNSKGAGPESEPYVFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGY 949
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ RY + A ++ G G+
Sbjct: 950 LLQYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTRYKFYLRACTSKGCGK 1003
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 679 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 738
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 739 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 791
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW + + GY++ W+
Sbjct: 792 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 851
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L +H+ VLA+++ G G S P + FQ
Sbjct: 852 TKSLLDGRTHPKEVNILKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYV-FQ 910
Query: 591 MGE 593
E
Sbjct: 911 TPE 913
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTAT
Sbjct: 254 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAT 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
I N
Sbjct: 371 IDN 373
>gi|148666973|gb|EDK99389.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
musculus]
gi|148666974|gb|EDK99390.1| cell adhesion molecule with homology to L1CAM, isoform CRA_b [Mus
musculus]
Length = 1210
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 241/522 (46%), Gaps = 35/522 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D G R ENG L I + +D+G YSC
Sbjct: 439 GYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVD 498
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 499 NAMGKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 557
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++++ S KT V V G P
Sbjct: 558 EA---FEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD 614
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG + + E S + W G + I+ Y + N W +E+ R
Sbjct: 615 PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTR 665
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 666 VQG-EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQAS 724
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I WEPL +QN P + YK+ W+ + E E + V +R+ + Y
Sbjct: 725 QPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVY 779
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y+VKVQAIN +G P+ + VT++S ED P AP NST + VTW+ I +E
Sbjct: 780 APYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIP--KE 837
Query: 420 NIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G L G++I +WK +P+E + S RN ++ L P +++++ V+AY
Sbjct: 838 TVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDPFSEFHLTVLAY 896
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
N+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 897 NSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 937
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP----QGVFSRGFNSTAINVTWNPI 414
Y Y+ +V A+N+VG S + P AP Q + + + + W P+
Sbjct: 680 YVRYQFRVTAVNEVG---RSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 736
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + +N G + +++ + + PEE ++ T P Y VKV A N
Sbjct: 737 KSMEQN--GPGLEYKVSWKPQGAPEEWEEEIVTNHTLRVMTPTVYAP---YDVKVQAINQ 791
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P+ + + P P + +N T V VTW + + GY++ W
Sbjct: 792 LGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 851
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 852 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYI-F 910
Query: 590 QMGE 593
Q E
Sbjct: 911 QTPE 914
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 255 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 314
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 315 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 371
Query: 124 I 124
I
Sbjct: 372 I 372
>gi|338714495|ref|XP_003363092.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Equus caballus]
Length = 1225
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + ++C ++P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+LRC + + L + W+ +G
Sbjct: 514 NAKGKTAVTANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++ + ++ T V + P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQG-KETTVLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQA+N +G GPE + V ++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + G L G++I +WK +P+E + S R++ ++ L +++++ V+A
Sbjct: 852 DRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRSYGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYTFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEVGELNDINITTPSQPSWHLRNLNAATKYKFYLRACTSKGCGK 1019
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAVNHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY++ W+
Sbjct: 808 GSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINWWK 867
Query: 536 VDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+ R + + + G + L +H+ VLA+++ G G S P TFQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEP-YTFQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D GIY CTA
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTAN 329
Query: 64 NVHG 67
N G
Sbjct: 330 NFLG 333
>gi|338714497|ref|XP_003363093.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Equus caballus]
Length = 1171
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + ++C ++P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+LRC + + L + W+ +G
Sbjct: 514 NAKGKTAVTANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++ + ++ T V + P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQG-KETTVLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQA+N +G GPE + V ++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + G L G++I +WK +P+E + S R++ ++ L +++++ V+A
Sbjct: 852 DRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRSYGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYTFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEVGELNDINITTPSQPSWHLRNLNAATKYKFYLRACTSKGCGK 1019
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D GIY CTA
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTAN 329
Query: 64 NVHG 67
N G
Sbjct: 330 NFLG 333
>gi|194221130|ref|XP_001497302.2| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Equus caballus]
Length = 1209
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 276/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + ++C ++P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLYCEFFSSPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+LRC + + L + W+ +G
Sbjct: 498 NAKGKTAVTANLDIRNA-TKLRISPKNPRVPRSHTLELRCESTCDSYLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++ + ++ T V + P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDKGIYSCSAQTALDSVADITQVTILDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQG-KETTVLLSLAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQA+N +G GPE + V ++S ED P AP NST + VTW+ I +
Sbjct: 778 YAPYDVQVQAVNHLGSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + G L G++I +WK +P+E + S R++ ++ L +++++ V+A
Sbjct: 836 DRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRSYGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYTFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEVGELNDINITTPSQPSWHLRNLNAATKYKFYLRACTSKGCGK 1003
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 679 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 738
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 739 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAVNHL 791
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW + + GY++ W+
Sbjct: 792 GSGPEPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSSIPKDRVHGHLKGYQINWWK 851
Query: 536 VDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+ R + + + G + L +H+ VLA+++ G G S P TFQ
Sbjct: 852 TKSLLDGRTHPKEVNILRFSGQRSYGMVPSLDAFSEFHLTVLAYNSKGAGPESEP-YTFQ 910
Query: 591 MGE 593
E
Sbjct: 911 TPE 913
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D GIY CTA
Sbjct: 254 KGETLLLECFAEGLPTPQVDWNKLGGDLPKGRETKENYGKTLKIENVSYRDKGIYRCTAN 313
Query: 64 NVHG 67
N G
Sbjct: 314 NFLG 317
>gi|296225704|ref|XP_002758612.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Callithrix jacchus]
Length = 1209
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 166/594 (27%), Positives = 276/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL----RCSAHTEELLDVAYIWTH 119
N G L + + + P I L+L +C AH + L ++ W+
Sbjct: 498 NSIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDAHLKHSLKLS--WSK 554
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G ++N E I IDG L I+N + D G Y C + + + T V V
Sbjct: 555 DGEA---FEINGTEDGRIIIDGANLTISNITLEDQGIYCCSAHTDLDSAADITQVTVLDV 611
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEV 237
P P + + E S + W G + I+ Y + N W +E+
Sbjct: 612 PDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EEL 662
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 663 TRVQGKKTTVIL-PLAPFVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQ 721
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 722 ASQPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTP 775
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ I
Sbjct: 776 AVYAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP- 834
Query: 417 IRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + GRL G++I +WK +P+E V S RN ++ L +++++ V
Sbjct: 835 -KDRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLKFS-GQRNSGMVPSLDAFSEFHLTV 892
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY
Sbjct: 893 LAYNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGKLTGY 949
Query: 530 KVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ ND I + + +L+ RY + A ++ G G+
Sbjct: 950 LLQYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTRYKFYLRACTSKGCGK 1003
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 679 FVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEPLKSM 738
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y VKV A N
Sbjct: 739 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQAINQL 791
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP+ + + P P + IN T V VTW + + GY++ W+
Sbjct: 792 GSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQINWWK 851
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D ++ ++ +V L +H+ VLA+++ G G S P I FQ
Sbjct: 852 TKSLLDGRTHPKEVNVLKFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 910
Query: 591 MGE 593
E
Sbjct: 911 TPE 913
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
I N
Sbjct: 371 IDN 373
>gi|344276065|ref|XP_003409830.1| PREDICTED: neural cell adhesion molecule L1-like protein [Loxodonta
africana]
Length = 1225
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK W+K D G R I ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCVFFASPKASVSWQKVDEAKPLEGIRYYIHENGTLQINKTTEEDAGPYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+L C + ++ L + W+ +G
Sbjct: 514 NAKGKAAVTANLDIRNA-TKLRVSPKNPRVPRSHILELHCESKSDSHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I N + D G Y C+ ++ + + T V V P
Sbjct: 573 ---EAFEINGTEDGRIIIDGANLTIANVTLEDQGVYSCLAQTALDSTADITQVTVLDLPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLLLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQG-KETTVMLSLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQAIN +G GPE VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVQVQAINQLGSGPEPHSVTLYSGEDYPDTAPVIHRVDVINSTVVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + RN+ ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQISWWKTKSLLDGRTHPKEVNILRF-LGPRNYGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P+ + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PNKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPIWHLSNLNATTKYKFYLRACTSKGCGK 1019
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPTVYAPYDVQVQAINQL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + P P + IN T V VTW + + GY++ W+
Sbjct: 808 GSGPEPHSVTLYSGEDYPDTAPVIHRVDVINSTVVKVTWSTIPKDRVHGRLKGYQISWWK 867
Query: 536 VDQDMS-RANDTIIPVGNTLDADIVDLSPG----KRYHMRVLAFSNGGDGRMSSPAITFQ 590
+ R + + + L + P +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFLGPRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K N L I VS D GIY CTA
Sbjct: 270 KGETLLLECFAEGLPTPQVEWDKLGGDLPKGRVTKENYNKTLKIENVSYHDKGIYRCTAN 329
Query: 64 NVHG 67
N G
Sbjct: 330 NFLG 333
>gi|126342128|ref|XP_001378160.1| PREDICTED: neural cell adhesion molecule L1 [Monodelphis domestica]
Length = 1344
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 268/589 (45%), Gaps = 38/589 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G + CN P P W +D + R + NG L I + +D+G Y C A
Sbjct: 528 QGSTAYLLCNAFGVPMPSIQWLNRDQATVLQDERFVPYANGTLAIRDLQTNDTGSYFCQA 587
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N K L V + ++ P T+ N+ C + L++ W N
Sbjct: 588 DNDQNRVSIKAHLQVKEA-TQIKKGPEDRTVKKGSNVNFPCLVSFDPSLNIQIDWYWNDQ 646
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + + I L I + +AD G Y CV K+ + + K TV+V G PG
Sbjct: 647 NIKDF----YKEDKYLIKEEELTIISLDYADQGNYSCVAKTALDSVEKKATVLVVGSPGP 702
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRY 240
G +++ + + W+ + PI Y I RT TW+ ++ V G E
Sbjct: 703 VGQLELYKQKDFHVQLSWSPAEEHNSPIEKYNIEFEDRTMEPGTWYPLAT-VPGNET--- 758
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
S L P+ Y F+VIA N+ G EPS S + TP P + P+ + G G +
Sbjct: 759 ------STRLKLSPFVHYNFRVIANNKFGASEPSPDSEPFITPKSVPEKNPTNVKGEGNE 812
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
++ I+W+PL N P + Y++ WR+KN++E++ ++ V V P+ +
Sbjct: 813 TNNMVITWKPLKWIDWNGPELKYRVQWRQKNESEWREVMVRASKYV---VSNTPT---FV 866
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
YE+KVQAIN+VG GP+ +V +S ED+PQ P V N+T + + W P++L
Sbjct: 867 PYEIKVQAINEVGKGPDPHIVIGYSGEDVPQAIPI-VAIELLNATTVRIKWEPVDL--NE 923
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNN 474
+RG L G+R+ YW ++ + + +T + A++ L+P + Y V V +N+
Sbjct: 924 VRGHLRGYRVTYWWVNSRWSRSKRHTPKTIIDKPASAMEAVLPDLRPYSIYSVHVQVFNS 983
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR-YVSPSFEEEPIIGYKVRV 533
GP SE T P +P S ++++ ++ T + ++WR ++P+ E + GY++
Sbjct: 984 RSLGPPSETIKFETEEGVPDRPQS-LNLRRLSDTALQLSWRPPLNPNGE---LKGYQLIY 1039
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
+Q+ T TL ++ DL P Y ++ A + G G M
Sbjct: 1040 RPFNQEPEENEMTEFLPPTTLMFNLSDLKPQTLYRFQLRATTKVGPGEM 1088
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 150/644 (23%), Positives = 248/644 (38%), Gaps = 96/644 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTA 62
G + C + P+P W+ +G + + R + G L++S V +D+ + C A
Sbjct: 435 GETARLNCQVQGRPRPMVTWRINGVSLENLTRDDKLRVQGGALILSNVQPNDTMVTQCEA 494
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N HG+ + + V+ QLP KI ++ + T LL A+ +
Sbjct: 495 RNKHGLLLANAYISVV-------QLPTKILTPDNKTYR-EVQGSTAYLLCNAFGVPMPSI 546
Query: 123 RIGNMD-----LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ N D +E P N G L I + D G Y C + ++S K + V+
Sbjct: 547 QWLNRDQATVLQDERFVPYAN---GTLAIRDLQTNDTGSYFCQADNDQNRVSIKAHLQVK 603
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ G + V K S N + + + W + + KE
Sbjct: 604 EATQIKKGPEDRTVKKGS--------NVNFPCLVSFDPSLNIQIDWYWNDQNIKDFYKE- 654
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK-PYQAPSRIGG 296
D+Y ++E E +I+ L Y + + S T D +A + G
Sbjct: 655 DKYLIKEE-------------ELTIIS---LDYADQGNYSCVAKTALDSVEKKATVLVVG 698
Query: 297 GGGKIGDL----------SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE---- 342
G +G L +SW P E+ N+P Y I EF+ T++
Sbjct: 699 SPGPVGQLELYKQKDFHVQLSWSPA--EEHNSPIEKYNI--------EFEDRTMEPGTWY 748
Query: 343 -----YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAP 394
GN +++ + Y +V A N G P P+SE + + +P+ P
Sbjct: 749 PLATVPGNETSTRLKLSP---FVHYNFRVIANNKFGASEPSPDSE--PFITPKSVPEKNP 803
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
V G + + +TW P++ I N G + +R++ W++ N E + R
Sbjct: 804 TNVKGEGNETNNMVITWKPLKWIDWN--GPELKYRVQ-WRQKNESE----WREVMVRASK 856
Query: 455 LIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+V P Y +KV A N G+GP+ + + PQ P V I+ +N TTV +
Sbjct: 857 YVVSNTPTFVPYEIKVQAINEVGKGPDPHIVIGYSGEDVPQAIP-IVAIELLNATTVRIK 915
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN----DTIIPV-GNTLDADIVDLSPGKRYH 568
W V + + GY+V W V+ SR+ TII + ++A + DL P Y
Sbjct: 916 WEPVDLNEVRGHLRGYRVTYWWVNSRWSRSKRHTPKTIIDKPASAMEAVLPDLRPYSIYS 975
Query: 569 MRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLL 612
+ V F++ G S I F+ E + S L S T L
Sbjct: 976 VHVQVFNSRSLGPPSE-TIKFETEEGVPDRPQSLNLRRLSDTAL 1018
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A G + + C E P P W N + +G R ++N N L + V +D G Y
Sbjct: 342 ALRGQPLVLECIAEGFPTPTIKWSYPSNQMQAG--RVTYQNFNKTLRLVRVEEEDDGEYR 399
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + + V P Y+ Q P + +A +L C V W
Sbjct: 400 CWAENTLGSAQHVYYVTVEAAP-YWLQEPESLVLAPGETARLNCQVQGRPRPMVT--WRI 456
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NGV + N+ ++ + + GG L ++N D +C ++ G +
Sbjct: 457 NGVSLENLTRDD----KLRVQGGALILSNVQPNDTMVTQCEARNKHGLL 501
>gi|134085232|emb|CAM60096.1| cntn2 [Danio rerio]
Length = 576
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 231/443 (52%), Gaps = 26/443 (5%)
Query: 98 NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---IDG----GLLEITNAS 150
N L+C A + +D+ + W+ NGV + +LE PN + ++G G L I N
Sbjct: 87 NATLQCHASHDPTMDLTFTWSLNGVPL------DLEEPNGHYRRMEGKETIGDLVIVNGQ 140
Query: 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
+ AG Y C ++ V ++V GPPG PGG+ V V+ TS ++W+ G N PI
Sbjct: 141 LSHAGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGLVVTSVNDTSVELRWSRGYDNHSPI 200
Query: 211 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
Y I+ R++ W + E G E++ L PW YEF+VIA N LG
Sbjct: 201 GKYVILGRSSQTHDWKRMRTDPANIE-----GNAESARVIDLRPWMDYEFQVIASNILGS 255
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
GEPS PSP+ T P APS +GGGGG +L I+W P+ RE QN + Y + +RK+
Sbjct: 256 GEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMVREYQNGDSFGYILAFRKQ 315
Query: 331 NDTEFQSETLKEYGNVGIA--VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
+ T+ + NV + V S Y +EV+++A N G GP S++ + SAE+
Sbjct: 316 G---IPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKGEGPFSQIAVVHSAEE 372
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
P V+P+ + + + I V+W PI+ + NI G L G+ I+YW++ E A +
Sbjct: 373 EPTVSPRRINATALTAFEIQVSWEPIQHL--NINGVLRGYEIRYWRQHEREAAADRVRTA 430
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
N A + GL+P+T Y++ V+AYN+AG GP S R T + P +PP V K ++ +
Sbjct: 431 GLENTARVTGLRPNTLYHITVLAYNSAGTGPASPRTTVITKKPPPNRPPGNVSWK-VDGS 489
Query: 509 TVHVTWRYVSPSFEEEPIIGYKV 531
V V W +V E ++GYKV
Sbjct: 490 WVTVRWDHVKSMDNESAVLGYKV 512
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P + E P VAP G+ G N + +TW P ++
Sbjct: 240 WMDYEFQVIASNILGSGEPSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTP--MV 297
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + K+ P T V + ++R L + V++ AYN G
Sbjct: 298 REYQNGDSFGYILAFRKQGIPTWTVVKVPNVESSRYVYSNDSLTAYCPFEVRIKAYNKKG 357
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
EGP S+ + + + P P ++ + + V+W + + GY++R W
Sbjct: 358 EGPFSQIAVVHSAEEEPTVSPRRINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWR- 416
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ A D + G A + L P YH+ VLA+++ G G S
Sbjct: 417 QHEREAAADRVRTAGLENTARVTGLRPNTLYHITVLAYNSAGTGPAS 463
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 108/507 (21%), Positives = 198/507 (39%), Gaps = 48/507 (9%)
Query: 4 EGGNVTIFCNPEAAPKPK--FVWKKDG---NIIGSGGRRKIFEN----GNLLISPVSRDD 54
+G N T+ C+ P F W +G ++ G + E G+L+I
Sbjct: 84 QGENATLQCHASHDPTMDLTFTWSLNGVPLDLEEPNGHYRRMEGKETIGDLVIVNGQLSH 143
Query: 55 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
+G Y+CTA V + +L+V P L +T +++LR S + +
Sbjct: 144 AGTYTCTAQTVVDSAMASAKLVVRGPPGPPGGL--VVTSVNDTSVELRWSRGYDNHSPIG 201
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG-----EYECVVKSTVGK-- 167
+ G D + T NI+G +A D E++ + + +G
Sbjct: 202 K-YVILGRSSQTHDWKRMRTDPANIEG---NAESARVIDLRPWMDYEFQVIASNILGSGE 257
Query: 168 ---ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA---TNGRPITHYKIIARTNW 221
S + P P G+ ++ I WT NG Y + R
Sbjct: 258 PSMPSPRAQTKEAAPTVAPSGLGGGGGNRNELIITWTPMVREYQNGDSFG-YILAFRKQG 316
Query: 222 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
TW V V E RY ++ L + +E ++ A N+ G G P S +
Sbjct: 317 IPTWTVVK--VPNVESSRYVYSNDS-----LTAYCPFEVRIKAYNKKGEG-PFSQIAVVH 368
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 341
+ ++P +P RI ++ +SWEP+ N Y+I + ++++ E ++ ++
Sbjct: 369 SAEEEPTVSPRRINATALTAFEIQVSWEPIQHLNINGVLRGYEIRYWRQHEREAAADRVR 428
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
G A R+ T Y + V A N G GP S T+ + + P P G S
Sbjct: 429 TAGLENTA--RVTGLRPNTLYHITVLAYNSAGTGPASPRTTVITKKPPPN-RPPGNVSWK 485
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ + + V W+ ++ + + ++G+++ Y K + V S+T+ + + L
Sbjct: 486 VDGSWVTVRWDHVKSM--DNESAVLGYKVLY-KHEGQSALKVLEKSKTS----VKLPLPK 538
Query: 462 DTKYYV-KVMAYNNAGEGPESERYLER 487
D Y V ++ ++ + G+G E + R
Sbjct: 539 DNGYVVLEIRSWGDGGDGAAHETIVSR 565
>gi|395545762|ref|XP_003774767.1| PREDICTED: neural cell adhesion molecule L1 [Sarcophilus harrisii]
Length = 1248
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 274/592 (46%), Gaps = 43/592 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G + CN P P+ W +D + R F NG+L I + +D+G Y C A
Sbjct: 433 QGSTAYLLCNAFGVPMPRIQWLTRDRATVLQDERFVPFANGSLAIRDLRINDTGSYFCEA 492
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N + L V + ++ P + N+ C + L++ W N
Sbjct: 493 DNDQNTVAIQAHLQVKEA-TQIKKGPQNQIVKKGSNVNFMCQVSFDPSLEIQINWYWNDQ 551
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I ++ + L I N ++D G Y CVVK+ + + K ++V G PG
Sbjct: 552 NIKDI----FSDDKYILKEEELTIKNLDYSDQGNYSCVVKTALDSVEKKAALLVVGSPGP 607
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRY 240
G V++ + + W+ + PI Y I RT W ++ V G E
Sbjct: 608 VGQVELYKQKDFQVQLSWSPAEEHNSPIEKYNIYFEDRTLDPGFWHQLAT-VPGNE---- 662
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
S + L P+ Y F+V+A N+ G +PS S + TP P + PS + G G +
Sbjct: 663 -----TSTKLKLSPFIHYNFRVVASNKYGTSDPSPDSELFVTPKSVPEKNPSDVKGEGNE 717
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
++ I+W PL N + Y++ WR+KN++E+Q + V P+ +
Sbjct: 718 TNNMVITWMPLKWMDWNGMELKYRVQWRQKNESEWQEVMARA---PSFVVSNTPT---FV 771
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
YE+KVQA+N+VG GP+ ++V +S ED+PQ P + N+T++ + W P++L +
Sbjct: 772 PYEIKVQAVNEVGKGPDPQIVIGYSGEDVPQAIPI-IDIESLNATSVKIKWGPVDLNK-- 828
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDTKYYVKVMAYNN 474
+RG L G+++ YW ++ + + S+ + A++ L+P + Y V+V +N
Sbjct: 829 VRGHLRGYKVTYWWVNSRWSRSKRHSSKMSIERPASATEAVLSDLRPYSIYNVQVQVFNG 888
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR-YVSPSFEEEPIIGYKVRV 533
G GP SE T P +P S +H++ ++ T + ++W+ ++P+ E + GY++
Sbjct: 889 RGLGPPSETRQFHTEEGVPDRPQS-LHLRRLSDTALQLSWKPPLNPNGE---LKGYQLFY 944
Query: 534 WEVDQDM---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
++Q+ + N T+ P L ++ LSP YH ++ A ++ G G M
Sbjct: 945 EAINQETEEKEKKNQTLHPT--ILMLNLSGLSPQALYHFQLRATTSVGPGEM 994
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A G + + C E P P W N + +G R ++N N L + V +D G Y
Sbjct: 247 ALRGQPLVLECIAEGFPTPTIKWSYPSNQMQAG--RVTYQNFNKTLRLVRVEEEDDGEYR 304
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N GM + + V P Y+ Q P + +A +L C V W
Sbjct: 305 CWAENTLGMAQHVYYVTVEAAP-YWLQEPESLVLAPGETARLNCQVQGRPRPMVT--WRI 361
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ + N+ ++ + + GG L ++N D +C ++ G + + V
Sbjct: 362 NGISLENLTRDD----KLRVQGGALILSNVQPNDTMVTQCEARNKHGLLLANAYIFV 414
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 141/341 (41%), Gaps = 46/341 (13%)
Query: 157 YECVVKST--VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSAT---IQW-------TDGA 204
YE V++ VGK VI +P + ++++ +AT I+W G
Sbjct: 773 YEIKVQAVNEVGKGPDPQIVIGYSGEDVPQAIPIIDIESLNATSVKIKWGPVDLNKVRGH 832
Query: 205 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 264
G +T++ + NS W H ++R EA + + L P+S Y +V
Sbjct: 833 LRGYKVTYWWV------NSRWSRSKRHSSKMSIERPASATEAVLSD-LRPYSIYNVQVQV 885
Query: 265 GNELGYGEPSSPSPQYNTPA---DKPYQAPSRIGGGGGKIGD--LSISWEPL--PREKQN 317
N G G PS + Q++T D+P R ++ D L +SW+P P +
Sbjct: 886 FNGRGLGPPSE-TRQFHTEEGVPDRPQSLHLR------RLSDTALQLSWKPPLNPNGELK 938
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 377
++Y+ ++ + E +++TL + I ++ + Y +++A VGPG
Sbjct: 939 GYQLFYEAINQETEEKEKKNQTL----HPTILMLNLSGLSPQALYHFQLRATTSVGPG-- 992
Query: 378 SEVVTIFSAEDMPQVAPQ-GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED 436
E++T + + P G S + A + W+P E + ++ ++ I+
Sbjct: 993 -EMITQEGSTILKSGIPTFGNISAVTSENASTIYWSP-EEGQHDVTFKIWFKSIEGTSGC 1050
Query: 437 NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+ V Y ++ + + L+PDT+Y + YN E
Sbjct: 1051 LIQPQHVNY----SQKFYIQENLEPDTQYTICFFGYNYTDE 1087
>gi|198467260|ref|XP_001354326.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
gi|198149415|gb|EAL31379.2| GA14061 [Drosophila pseudoobscura pseudoobscura]
Length = 1309
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 264/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVT+ C APKP+ W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 444 DGRNVTLRCRVTGAPKPQVRWLRATNWL-TGGRYIVQANGDLQILDVTFSDAGQYTCYAE 502
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++G L V+ + Q P +AA ++ RC+ + L++ W +G
Sbjct: 503 NKFGNKSAEGSLTVMEH-TRITQEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQP 561
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + K +IV+ P P
Sbjct: 562 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATAKANLIVQDVPNAP 617
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V +
Sbjct: 618 K-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFNTSFTPASWDTAFEKVPNTDF----- 671
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
S + PW+ Y F+VIA N++G +PS+ S T D P++ P + G G +
Sbjct: 672 ----SFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNPDNVVGQGTEPN 727
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAP Y++ W++ ++++ + E+ I + P+ + +
Sbjct: 728 NLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVITDQPT---FVK 784
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNS-TAINVTWNPIELIRE 419
Y +KV AIN+ G +E V +S ED P AP R + T+ + W P+ E
Sbjct: 785 YHIKVVAINERGESNVAAEEVIGYSGEDRPLDAPTNFTMRQITTATSAYLAWTPVS--EE 842
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E EE + + AL+ +PD+K + +++AYN GP
Sbjct: 843 SVRGHFKGYKIQTWTEKEGEEGLREIHVKGDTDTALVTQFKPDSKNFARILAYNGRFNGP 902
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P ++ + + VTW+ P + GYK+ EV
Sbjct: 903 PSAVIDFDTPEGVP-SPVQSLDAHPLGSSAFWVTWK--KPLHPNGKLTGYKIYYEEVQGS 959
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 960 FVGERREYDPHITDPRITRMKMAGLKPKTKYRISITATTKMGEG 1003
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG+ I R G +L+I + DD+G Y+C
Sbjct: 257 ALRGKRMELFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTC 316
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ P T A + +C A + W HN
Sbjct: 317 DVSNGVGNAQSFSIILEVNAIPYFTVEPDFKTAAEDEEVVFQCEAAG--FPEPKISWIHN 374
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N +D G Y C +++G + + V+
Sbjct: 375 GKPI------EQSTPNPRRTVTDNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQA 428
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P + V+ + + T G P + + TNW
Sbjct: 429 LPPEIEEPPTALSTVDGRNVTLRCRVT-----GAPKPQVRWLRATNW 470
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 30/244 (12%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS-ISWEPLPREKQ 316
Y KV+A NE G ++ + D+P AP+ + ++W P+ E
Sbjct: 785 YHIKVVAINERGESNVAAEEVIGYSGEDRPLDAPTNFTMRQITTATSAYLAWTPVSEESV 844
Query: 317 NAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVGP 374
YKI W +K E L+E G + ++F ++ ++ A N
Sbjct: 845 RGHFKGYKIQTWTEKEG----EEGLREIHVKGDTDTALVTQFKPDSKNFARILAYNGRFN 900
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PI---------ELIRENIRGR 424
GP S V+ + E +P Q + + S+A VTW P+ ++ E ++G
Sbjct: 901 GPPSAVIDFDTPEGVPSPV-QSLDAHPLGSSAFWVTWKKPLHPNGKLTGYKIYYEEVQGS 959
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+G R +Y +P T R TR + GL+P TKY + + A GEG +E Y
Sbjct: 960 FVGERREY----DPHITD----PRITR--MKMAGLKPKTKYRISITATTKMGEG--TEHY 1007
Query: 485 LERT 488
+E++
Sbjct: 1008 IEKS 1011
>gi|417406036|gb|JAA49700.1| Putative neural cell adhesion molecule l1-like protein isoform 3
[Desmodus rotundus]
Length = 1170
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 279/595 (46%), Gaps = 41/595 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +V++ C+ A+P+ W + + G R ++F+NG L +S + +D+G Y+C
Sbjct: 453 GSSVSLHCDFFASPQAVVSWLRVEELRPIEGPRYRVFDNGTLQVSRATEEDAGSYTCWVE 512
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + P + L+LRC++ + L + W+ +G
Sbjct: 513 NAKGKTAVTASLDIRKATTVRVS-PENPRVPRSHTLELRCASRCDPHLGPSLTLAWSKDG 571
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ N E + +DG L I+N + D G Y C ++T+ ++ +T V V P
Sbjct: 572 ---DALQTNGTEDGRVVLDGARLTISNVTPEDQGVYSCAARTTLDSVADETRVTVLDVPD 628
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P +++ E S + W G + IT Y + + + + V+ E
Sbjct: 629 PPENLRLSERQNRSVRLAWDAGDDHNSNITEYVVEFEGDKEAPGRWATLTVVSGE----- 683
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
S+ L P+ Y F+V+A NE+G PS PS + TP P + P I +
Sbjct: 684 ---GTSVLLPLAPYVRYRFRVVAVNEVGRSRPSRPSDHHETPPAAPDKNPQNIRVQASQP 740
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYT 360
++ I WEPL +QN P + Y++ WR + E++ ET++E+ +R+ + Y
Sbjct: 741 KEMIIKWEPLKPMEQNGPGLEYRVAWRPQGAPVEWEEETVREHS------LRVMTPAVYA 794
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNPIELIR 418
Y+V+VQA+N +G GPE + VT++S ED P AP QGV NST + VTW+ + +
Sbjct: 795 PYDVQVQAVNRLGAGPEPQSVTLYSGEDYPDAAPVIQGV--DVVNSTLVRVTWSSVP--K 850
Query: 419 ENIRGRLIGHRIKYWKEDN-------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + G+L G+++ +WK + P+E +V + R ++ L+ +++ + V+A
Sbjct: 851 DRVHGQLKGYQVTWWKTRSLLDGRPLPKEASVLRFA-GQRGSGMLPSLEAFSEFRLTVLA 909
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y +T P++ P+ + + ++ V W P + G+ +
Sbjct: 910 YNSKGAGPESEPYTFQTPEGVPEQ-PAFLKVVKVDKDAAMVAWGL--PEKLNGNLAGFLL 966
Query: 532 RVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ ++ +++ +D + + LS +Y + V A + G GR S
Sbjct: 967 QYQTINDTEEIGELHDINVTAPAKPSWRLSGLSANTKYKLYVRACTARGCGRAVS 1021
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 64/172 (37%), Gaps = 8/172 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C E P P+ WKK G + G K L I VS +D G Y CTATN
Sbjct: 270 GDTLLLECFAEGLPTPQIEWKKMGGDLPKGRETKENYGKMLKIEKVSDEDRGRYRCTATN 329
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P + ++ P + ++ L C A E + + R+
Sbjct: 330 SLGSATHDFHVTVEEPPRWVKK-PQSGVYSTGTSVILLCEAEGEPKPTIRW-------RV 381
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ + E I G + TN + Y+C + G I + V
Sbjct: 382 NGLPIEENPFAGDVIFPGEVSFTNLQPNHSAVYQCEASNAHGTILATANIDV 433
>gi|189242457|ref|XP_970217.2| PREDICTED: similar to AGAP000720-PA [Tribolium castaneum]
Length = 1259
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 273/596 (45%), Gaps = 45/596 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G NVT+ C APKP W + + +GGR + NG+L+I V DD G Y+C
Sbjct: 440 AVDGQNVTMICKVLGAPKPSIKWSLNEREL-TGGRYIVQPNGDLIIRNVQFDDRGNYTCF 498
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G +K L+V +Y P +AAH + RC+A +++ LD+ IW N
Sbjct: 499 AENKFGNASAKAALLV-KSHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKND 557
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I DL E E + L IT D+G Y CV ++ + + S K +IV+ P
Sbjct: 558 QPI---DLEE-EPRFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQLIVQDVPN 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRY 240
P ++ VE H ATI+W N PI+HY I T + TW +V ++
Sbjct: 614 -PPSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYNTTFTPETWTAAYNNVPATDM--- 669
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
S + PW+ Y F+VIA N++G PS+ S T D PY+ P + G G +
Sbjct: 670 ------SYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVPYKNPDDVKGEGDR 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYY 359
+L ISW P+P+ + NA Y+++WR+ E ++S + ++ V P+ +
Sbjct: 724 PDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVKQFVVDNQPT---F 780
Query: 360 TEYEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQG--VFSRGFNSTAINVTWNPIEL 416
+Y +KV A+N+ G + I +S E++P AP + TA+ ++WNP++
Sbjct: 781 QQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTAL-LSWNPVD- 838
Query: 417 IRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+++++G L G++IK W + +P + + AL+ L P T Y +V YN
Sbjct: 839 -KKSVQGHLKGYKIKTWSDISSPMHNEIQVQGSVAK--ALVDNLDPYTMNYAQVFVYNGK 895
Query: 476 GEGPESERYLERTYRKAPQK-------PPSAVHIKGINPTTVH---VTWRYVSPSFEEEP 525
GP SE +T P+ P A T +TW+ P
Sbjct: 896 YNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFRPNDATKTASSAFLLTWK--KPEKPNGM 953
Query: 526 IIGYKVRVWEVDQDMSR---ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY + +D + A + I G+ L A + L P Y + + A ++ G
Sbjct: 954 LTGYDIYYRRLDDSTTNSKIARNPQIRGGDVLSAKLSGLEPDTNYVIYIAARTSAG 1009
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 141/609 (23%), Positives = 233/609 (38%), Gaps = 62/609 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 59
A EG V C PKP+ W +G I R+ EN ++I + D+G Y
Sbjct: 347 AAEGETVEFRCEAGGVPKPEIKWIHNGKPISEAPPNPRRRVENNRIVIERLVESDTGNYG 406
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G + VL + P +N+ + C + +
Sbjct: 407 CNATNSLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGAPKPSIKWSLNE 466
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G + PN G L I N F D G Y C ++ G S K ++V+
Sbjct: 467 RELTGGRY----IVQPN-----GDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLVKSH 517
Query: 180 PGLPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ G + EV TSAT + + + + +II W + + +E
Sbjct: 518 TYITDGPEDYEVAAHTSATFRCNAVSDDSLDL---EII--------WLKNDQPIDLEEEP 566
Query: 239 RYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R+ + S+ + + + +A L + + P P + G
Sbjct: 567 RFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQLIVQDVP------NPPSMEGV 620
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVV--RIP 354
D +I W+ + + AP +Y I + +T F ET Y NV + +P
Sbjct: 621 ECHAKDATIRWKSMGDNR--APISHYIIEY----NTTFTPETWTAAYNNVPATDMSYNVP 674
Query: 355 SEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+T Y +V A+N +G P S+V T + D+P P V G + ++W
Sbjct: 675 MS-PWTNYTFRVIAVNKIGKSLPSTHSDVCT--TEPDVPYKNPDDVKGEGDRPDNLIISW 731
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---ALIVGLQPD-TKYYV 467
P+ I N +R+ YW+ D P E Y SR +W +V QP +Y +
Sbjct: 732 TPMPKIEHN--ADKFQYRV-YWRRDIPGER---YESRDITDWRVKQFVVDNQPTFQQYRI 785
Query: 468 KVMAYNNAGEGPESER-YLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWRYVSPSFEEEP 525
KV+A N GE + + + + P + P+ + I P T ++W V +
Sbjct: 786 KVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTALLSWNPVDKKSVQGH 845
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
+ GYK++ W D+S I V ++ +VD L P + +V + NG S
Sbjct: 846 LKGYKIKTW---SDISSPMHNEIQVQGSVAKALVDNLDPYTMNYAQVFVY-NGKYNGPPS 901
Query: 585 PAITFQMGE 593
++F+ E
Sbjct: 902 ETLSFKTPE 910
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 7/165 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTAT 63
G ++C P P+ VW KDG I S R G +L+I V+ +D G Y+C +
Sbjct: 258 GKQQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVS 317
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +S + + Y+ P + A ++ RC A ++ W HNG
Sbjct: 318 NGVGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIK--WIHNGKP 375
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
I N P ++ + I +D G Y C +++G +
Sbjct: 376 ISEAPPN----PRRRVENNRIVIERLVESDTGNYGCNATNSLGYV 416
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 112/293 (38%), Gaps = 50/293 (17%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS-----RIGGGGGKIGDLSISWE 309
+ Y KV+A NE G + + + P +AP+ +I G + +SW
Sbjct: 780 FQQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTAL----LSWN 835
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
P+ ++ YKI + +E ++ G+V A+V YT +V
Sbjct: 836 PVDKKSVQGHLKGYKIKTWSDISSPMHNE-IQVQGSVAKALVDNLDP--YTMNYAQVFVY 892
Query: 370 NDVGPGPESEVVTIFSAEDMPQVA------PQGVF----SRGFNSTAINVTWNPIELIRE 419
N GP SE ++ + E +P+ P G F + S+A +TW E
Sbjct: 893 NGKYNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFRPNDATKTASSAFLLTWKK----PE 948
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN---------WALIVGLQPDTKYYVKVM 470
G L G+ I Y + D+ S+ RN A + GL+PDT Y + +
Sbjct: 949 KPNGMLTGYDIYYRRLDDSTTN-----SKIARNPQIRGGDVLSAKLSGLEPDTNYVIYIA 1003
Query: 471 AYNNAGEGPESERYLE-RTYRKAPQKPP-------SAVHIKGINPTTVHVTWR 515
A +A GP E Y+E RT PP V TV + WR
Sbjct: 1004 ARTSA--GPSKEFYIERRTSPSGASTPPGVPDFDWETVKADDDGKVTVRIQWR 1054
>gi|426249265|ref|XP_004018370.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Ovis aries]
Length = 1225
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/597 (26%), Positives = 282/597 (47%), Gaps = 51/597 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + G R + ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYY-----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
N G L + + + ++P T+ H + +C +H + L ++ W+
Sbjct: 514 NAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WS 569
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G ++N + I IDG L I+N + D G Y C + + I+ T V V
Sbjct: 570 KDGEA---FEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLD 626
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P + + E S + W G + I+ Y + N W +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EE 677
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 678 LTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRV 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 355
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNP 413
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+
Sbjct: 791 PAVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGV--DVINSTLVKVTWST 848
Query: 414 IELIRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ +E + G L G+++ +WK +P+E + S RN+ ++ L ++++
Sbjct: 849 VP--KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFH 905
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ V+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P +
Sbjct: 906 LTVLAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNL 962
Query: 527 IGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
GY ++ ++ ++ ND I + +++L+ +Y + A ++ G G+
Sbjct: 963 TGYLLQYQIINDTDEIGELNDINITTPSKPSWRLLNLNATTKYKFYLRACTSKGCGK 1019
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW V + GY+V W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P PK W K G + GG K L I VS +D G Y CTA
Sbjct: 270 KGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKGNYRCTAN 329
Query: 64 NVHG 67
N G
Sbjct: 330 NFLG 333
>gi|426249267|ref|XP_004018371.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Ovis aries]
Length = 1209
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/597 (26%), Positives = 282/597 (47%), Gaps = 51/597 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + G R + ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYY-----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
N G L + + + ++P T+ H + +C +H + L ++ W+
Sbjct: 498 NAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WS 553
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G ++N + I IDG L I+N + D G Y C + + I+ T V V
Sbjct: 554 KDGEA---FEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLD 610
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P + + E S + W G + I+ Y + N W +E
Sbjct: 611 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EE 661
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 662 LTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRV 720
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 355
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 721 QASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 774
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNP 413
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+
Sbjct: 775 PAVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGV--DVINSTLVKVTWST 832
Query: 414 IELIRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ +E + G L G+++ +WK +P+E + S RN+ ++ L ++++
Sbjct: 833 VP--KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFH 889
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ V+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P +
Sbjct: 890 LTVLAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNL 946
Query: 527 IGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
GY ++ ++ ++ ND I + +++L+ +Y + A ++ G G+
Sbjct: 947 TGYLLQYQIINDTDEIGELNDINITTPSKPSWRLLNLNATTKYKFYLRACTSKGCGK 1003
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 679 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 738
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 739 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 791
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW V + GY+V W+
Sbjct: 792 GSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNWWK 851
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 852 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 910
Query: 591 MGE 593
E
Sbjct: 911 TPE 913
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P PK W K G + GG K L I VS +D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKGNYRCTAN 313
Query: 64 NVHG 67
N G
Sbjct: 314 NFLG 317
>gi|426249269|ref|XP_004018372.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Ovis aries]
Length = 1171
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/597 (26%), Positives = 282/597 (47%), Gaps = 51/597 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + G R + ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLDGSRYHVHENGTLQITETTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYY-----EQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
N G L + + + ++P T+ H + +C +H + L ++ W+
Sbjct: 514 NAKGKTAVTANLDIRNATNLRVSPKNPRVPKSHTLELH--CESKCDSHLKYSLKLS--WS 569
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G ++N + I IDG L I+N + D G Y C + + I+ T V V
Sbjct: 570 KDGEA---FEINGTDDGRIIIDGANLTISNVTMEDEGIYSCSAHTALDSIADMTQVTVLD 626
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P + + E S + W G + I+ Y + N W +E
Sbjct: 627 VPDPPENLHLSERQNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EE 677
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G KE ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 678 LTRVQG-KETTVVLSLAPYVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRV 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPS 355
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 737 QASQPKEMIIKWEPLKAMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMT 790
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFNSTAINVTWNP 413
Y Y+V+VQAIN +G GPE + V ++S ED P AP QGV NST + VTW+
Sbjct: 791 PAVYAPYDVQVQAINHLGSGPEPQSVILYSGEDYPDTAPVIQGV--DVINSTLVKVTWST 848
Query: 414 IELIRENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ +E + G L G+++ +WK +P+E + S RN+ ++ L ++++
Sbjct: 849 VP--KERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFH 905
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ V+AYN+ G GPESE ++ +T P++ P+ + + ++ T ++W P +
Sbjct: 906 LTVLAYNSKGAGPESEPFIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNL 962
Query: 527 IGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
GY ++ ++ ++ ND I + +++L+ +Y + A ++ G G+
Sbjct: 963 TGYLLQYQIINDTDEIGELNDINITTPSKPSWRLLNLNATTKYKFYLRACTSKGCGK 1019
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG P + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAMNEVGRSQPSHPSGHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKAM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + + P P + IN T V VTW V + GY+V W+
Sbjct: 808 GSGPEPQSVILYSGEDYPDTAPVIQGVDVINSTLVKVTWSTVPKERVHGHLKGYQVNWWK 867
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ + +V L +H+ VLA+++ G G S P I FQ
Sbjct: 868 TKSLLDGRTHPKEVNILRFSGQRNYGMVPSLDAFSEFHLTVLAYNSKGAGPESEPFI-FQ 926
Query: 591 MGE 593
E
Sbjct: 927 TPE 929
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 29/64 (45%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P PK W K G + GG K L I VS +D G Y CTA
Sbjct: 270 KGDTLLLECFAEGLPTPKVAWDKMGGDLPKGGESKNNSVDTLKIENVSYEDKGNYRCTAN 329
Query: 64 NVHG 67
N G
Sbjct: 330 NFLG 333
>gi|270016380|gb|EFA12826.1| neuroglian [Tribolium castaneum]
Length = 1267
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 171/596 (28%), Positives = 273/596 (45%), Gaps = 45/596 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G NVT+ C APKP W + + +GGR + NG+L+I V DD G Y+C
Sbjct: 440 AVDGQNVTMICKVLGAPKPSIKWSLNEREL-TGGRYIVQPNGDLIIRNVQFDDRGNYTCF 498
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G +K L+V +Y P +AAH + RC+A +++ LD+ IW N
Sbjct: 499 AENKFGNASAKAALLV-KSHTYITDGPEDYEVAAHTSATFRCNAVSDDSLDLEIIWLKND 557
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I DL E E + L IT D+G Y CV ++ + + S K +IV+ P
Sbjct: 558 QPI---DLEE-EPRFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQLIVQDVPN 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRY 240
P ++ VE H ATI+W N PI+HY I T + TW +V ++
Sbjct: 614 -PPSMEGVECHAKDATIRWKSMGDNRAPISHYIIEYNTTFTPETWTAAYNNVPATDM--- 669
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
S + PW+ Y F+VIA N++G PS+ S T D PY+ P + G G +
Sbjct: 670 ------SYNVPMSPWTNYTFRVIAVNKIGKSLPSTHSDVCTTEPDVPYKNPDDVKGEGDR 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYY 359
+L ISW P+P+ + NA Y+++WR+ E ++S + ++ V P+ +
Sbjct: 724 PDNLIISWTPMPKIEHNADKFQYRVYWRRDIPGERYESRDITDWRVKQFVVDNQPT---F 780
Query: 360 TEYEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQGVFSRGFN--STAINVTWNPIEL 416
+Y +KV A+N+ G + I +S E++P AP TA+ ++WNP++
Sbjct: 781 QQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTAL-LSWNPVD- 838
Query: 417 IRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+++++G L G++IK W + +P + + AL+ L P T Y +V YN
Sbjct: 839 -KKSVQGHLKGYKIKTWSDISSPMHNEIQVQGSVAK--ALVDNLDPYTMNYAQVFVYNGK 895
Query: 476 GEGPESERYLERTYRKAPQKPP--SAVHIKGINP--------TTVHVTWRYVSPSFEEEP 525
GP SE +T P+ A + P + +TW+ P
Sbjct: 896 YNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFRPNDATKTASSAFLLTWK--KPEKPNGM 953
Query: 526 IIGYKVRVWEVDQDMSR---ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY + +D + A + I G+ L A + L P Y + + A ++ G
Sbjct: 954 LTGYDIYYRRLDDSTTNSKIARNPQIRGGDVLSAKLSGLEPDTNYVIYIAARTSAG 1009
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 141/609 (23%), Positives = 233/609 (38%), Gaps = 62/609 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 59
A EG V C PKP+ W +G I R+ EN ++I + D+G Y
Sbjct: 347 AAEGETVEFRCEAGGVPKPEIKWIHNGKPISEAPPNPRRRVENNRIVIERLVESDTGNYG 406
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G + VL + P +N+ + C + +
Sbjct: 407 CNATNSLGYVYKDVYVNVLSLAPEILEAPTDTQAVDGQNVTMICKVLGAPKPSIKWSLNE 466
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G + PN G L I N F D G Y C ++ G S K ++V+
Sbjct: 467 RELTGGRY----IVQPN-----GDLIIRNVQFDDRGNYTCFAENKFGNASAKAALLVKSH 517
Query: 180 PGLPGGVQVVEV-HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ G + EV TSAT + + + + +II W + + +E
Sbjct: 518 TYITDGPEDYEVAAHTSATFRCNAVSDDSLDL---EII--------WLKNDQPIDLEEEP 566
Query: 239 RYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R+ + S+ + + + +A L + + P P + G
Sbjct: 567 RFVRSSDYSLTITQTIELDSGTYTCVARTALDEASAKAQLIVQDVP------NPPSMEGV 620
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVV--RIP 354
D +I W+ + + AP +Y I + +T F ET Y NV + +P
Sbjct: 621 ECHAKDATIRWKSMGDNR--APISHYIIEY----NTTFTPETWTAAYNNVPATDMSYNVP 674
Query: 355 SEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+T Y +V A+N +G P S+V T + D+P P V G + ++W
Sbjct: 675 MS-PWTNYTFRVIAVNKIGKSLPSTHSDVCT--TEPDVPYKNPDDVKGEGDRPDNLIISW 731
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---ALIVGLQPD-TKYYV 467
P+ I N +R+ YW+ D P E Y SR +W +V QP +Y +
Sbjct: 732 TPMPKIEHN--ADKFQYRV-YWRRDIPGER---YESRDITDWRVKQFVVDNQPTFQQYRI 785
Query: 468 KVMAYNNAGEGPESER-YLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWRYVSPSFEEEP 525
KV+A N GE + + + + P + P+ + I P T ++W V +
Sbjct: 786 KVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTALLSWNPVDKKSVQGH 845
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
+ GYK++ W D+S I V ++ +VD L P + +V + NG S
Sbjct: 846 LKGYKIKTW---SDISSPMHNEIQVQGSVAKALVDNLDPYTMNYAQVFVY-NGKYNGPPS 901
Query: 585 PAITFQMGE 593
++F+ E
Sbjct: 902 ETLSFKTPE 910
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 7/165 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTAT 63
G ++C P P+ VW KDG I S R G +L+I V+ +D G Y+C +
Sbjct: 258 GKQQKLYCIFGGTPLPQTVWYKDGKPIQSSDRITQDNYGKSLVIRVVNFEDEGKYTCEVS 317
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +S + + Y+ P + A ++ RC A ++ W HNG
Sbjct: 318 NGVGEAKSYSIDLKVFAIPYFIAEPERQNAAEGETVEFRCEAGGVPKPEIK--WIHNGKP 375
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
I N P ++ + I +D G Y C +++G +
Sbjct: 376 ISEAPPN----PRRRVENNRIVIERLVESDTGNYGCNATNSLGYV 416
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 112/293 (38%), Gaps = 50/293 (17%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS-----RIGGGGGKIGDLSISWE 309
+ Y KV+A NE G + + + P +AP+ +I G + +SW
Sbjct: 780 FQQYRIKVVAMNEKGEANVAPKEVIGYSGENIPIEAPTNFTLLQIQGPKTAL----LSWN 835
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
P+ ++ YKI + +E ++ G+V A+V YT +V
Sbjct: 836 PVDKKSVQGHLKGYKIKTWSDISSPMHNE-IQVQGSVAKALVDNLDP--YTMNYAQVFVY 892
Query: 370 NDVGPGPESEVVTIFSAEDMPQVA------PQGVF----SRGFNSTAINVTWNPIELIRE 419
N GP SE ++ + E +P+ P G F + S+A +TW E
Sbjct: 893 NGKYNGPPSETLSFKTPEGVPEAMSYLEAYPLGAFRPNDATKTASSAFLLTWKK----PE 948
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN---------WALIVGLQPDTKYYVKVM 470
G L G+ I Y + D+ S+ RN A + GL+PDT Y + +
Sbjct: 949 KPNGMLTGYDIYYRRLDDSTTN-----SKIARNPQIRGGDVLSAKLSGLEPDTNYVIYIA 1003
Query: 471 AYNNAGEGPESERYLE-RTYRKAPQKPP-------SAVHIKGINPTTVHVTWR 515
A +A GP E Y+E RT PP V TV + WR
Sbjct: 1004 ARTSA--GPSKEFYIERRTSPSGASTPPGVPDFDWETVKADDDGKVTVRIQWR 1054
>gi|350591362|ref|XP_003132376.3| PREDICTED: neural cell adhesion molecule L1-like protein [Sus scrofa]
Length = 1225
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 271/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR I ENG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAIVSWQKVEEAKPLEGRRYHIHENGTLQINTTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+L C + L + W+ +G
Sbjct: 514 NAKGKTAVTANLDIRNA-TKLRVSPKNPRVPKSHTLELHCENKCDSYLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I N + D G Y C+ +++ + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTIANVTLEDQGIYSCLAHTSLDSTADMTQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P +Q+ E H S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLQLSERHNRSVRLTWEAGDDHNSNISEYIVEFEGNKEEPGRW---------EELAR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G KE + L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VPG-KETTATLSLAPYVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKPMEQNGPGLEYRVTWKPQGALVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQAIN +G P+ + V ++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVQVQAINHLGSAPDPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
E + G L G+++ +WK +P+E V S RN+ ++ L +++++ V+A
Sbjct: 852 ERVHGHLKGYQVNWWKTKSLLDGRTHPKEVNVLRFS-GQRNYGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N+ G GPESE Y+ T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 FNSKGAGPESEPYVFHTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTLSKPSWRLSNLNATTKYKFYLRACTSKGCGK 1019
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + + W P++ +
Sbjct: 695 YVRYQFRVIAMNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPLKPM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ WK P+ V + T N L V + P Y V+V A N+
Sbjct: 755 EQN--GPGLEYRVT-WK---PQGALVEWEEETVTNHTLRV-MTPAVYAPYDVQVQAINHL 807
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G P+ + + + P P + IN T V VTW + + GY+V W+
Sbjct: 808 GSAPDPQSVVLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKERVHGHLKGYQVNWWK 867
Query: 536 VDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ R + + V G + L +H+ VLAF++ G G S P +
Sbjct: 868 TKSLLDGRTHPKEVNVLRFSGQRNYGMVPSLDAFSEFHLTVLAFNSKGAGPESEPYV 924
>gi|332811558|ref|XP_514131.3| PREDICTED: contactin-2 [Pan troglodytes]
Length = 1005
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 223/434 (51%), Gaps = 11/434 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEIVIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWK 434
+ G L+G+ I+YWK
Sbjct: 840 MNGILLGYEIRYWK 853
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTI----IPVGNTLDA 556
++R W+ AN T + VG+ L+A
Sbjct: 848 EIRYWKAGD--KGANSTTXXXWVGVGHILEA 876
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G E+ R L S E+ P K L AH L +Y W N
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 171
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 172 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 219
>gi|195132305|ref|XP_002010584.1| GI16006 [Drosophila mojavensis]
gi|193909034|gb|EDW07901.1| GI16006 [Drosophila mojavensis]
Length = 1302
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/587 (28%), Positives = 268/587 (45%), Gaps = 41/587 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+T+ C APKP+ W+ + N + +GGR + +G+L I V+ D+G Y+C A N
Sbjct: 454 GRNITMRCRVFGAPKPQVKWRHNHNWL-TGGRYTVLPSGDLQIQEVTFADNGNYTCLAVN 512
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + ++G L+V + Q P +AA ++ RC+ ++ LD+ W +G I
Sbjct: 513 KFGNETAQGSLVVKER-TRITQEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPI 571
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
E + + L I D+GEY CV ++ + + + K +IV+ P P
Sbjct: 572 DFA----AEARFVKTNDNSLTIAKTQELDSGEYTCVARTQLDEATAKANLIVQDVPNQPR 627
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGR 243
+ + A I W N PI HY I T++ ++W E V +
Sbjct: 628 LIGIT-CQADKAEISWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDF------ 680
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
S + PW+ Y F+VIA N++G EPS S T D PY+ P + G G + +
Sbjct: 681 ---SFVVQMSPWANYTFRVIAYNKIGPSEPSGHSDMCTTQPDVPYKNPDNVVGQGTEPNN 737
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L ISW P+P + NAPN Y++ W++ D + K+ N + IP + + +Y
Sbjct: 738 LVISWTPMPEIEHNAPNFQYRVSWKR--DIPAAAWENKDIYNWRQDNLLIPDQPTFVKYH 795
Query: 364 VKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNS-TAINVTWNPIELIRENI 421
+KV AIN G +E V +S ED P AP + S T V WN + E++
Sbjct: 796 IKVVAINAKGESNVAAEEVIGYSGEDRPLEAPTNFSMQQVTSATTAYVGWNKVS--EESV 853
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
RG G++I+ W + EE T N AL+ +PD+K Y +V+AYN GP S
Sbjct: 854 RGHFKGYKIQTWTDKEGEEGMREI--HTIDNGALVTQFKPDSKNYARVLAYNGRFNGPPS 911
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINP---TTVHVTWRY-VSPSFEEEPIIGYKVRVWEVD 537
T P+ PSAV P + +TW+ +SP+ + + GYK+ +EV
Sbjct: 912 AVIDFDT----PEGVPSAVESLEAYPLGSSAFWLTWKKPLSPNGK---LTGYKI-YYEVV 963
Query: 538 QDM----SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ R + I + L P +Y + + A + G+G
Sbjct: 964 KGSYVGERREYEPHITDPRITRMKMAGLKPNTKYRISITATTKMGEG 1010
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 140/618 (22%), Positives = 228/618 (36%), Gaps = 100/618 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 59
A E V C P+P W +G I R+ N + I + ++D+G Y
Sbjct: 358 AAEDEEVVFNCKAAGHPEPTIQWIHNGKPIEQSEPNPRRTVTNNYIKIVNLVKNDTGNYG 417
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G L VL P ++ P RN+ +RC V + H
Sbjct: 418 CNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGRNITMRCRVFGAPKPQVKWRHNH 477
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV--- 176
N + G + + G L+I +FAD G Y C+ + G + + +++V
Sbjct: 478 NWLTGGRYTV---------LPSGDLQIQEVTFADNGNYTCLAVNKFGNETAQGSLVVKER 528
Query: 177 ----------EGPPGLPGGVQVVEVHKTSAT--IQWTDGATNGRPITHY--KIIARTNWN 222
E G + E H + I+W +G+PI +TN N
Sbjct: 529 TRITQEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWL---KDGQPIDFAAEARFVKTNDN 585
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
S I K + +G E V + + N + P+ P
Sbjct: 586 SL-------TIAKTQELDSG------EYTCVARTQLDEATAKANLIVQDVPNQP------ 626
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
R+ G + ISWE P+ +P ++Y I + +T F +
Sbjct: 627 ----------RLIGITCQADKAEISWE--PQGDNRSPILHYTI----QFNTSFTPASWD- 669
Query: 343 YGNVGIAVVRIPSEFY--------YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVA 393
A ++PS + + Y +V A N +GP P + D+P
Sbjct: 670 -----TAYEKVPSTDFSFVVQMSPWANYTFRVIAYNKIGPSEPSGHSDMCTTQPDVPYKN 724
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V +G + ++W P+ I N +R+ WK D P A + ++ NW
Sbjct: 725 PDNVVGQGTEPNNLVISWTPMPEIEHNAPN--FQYRVS-WKRDIP---AAAWENKDIYNW 778
Query: 454 ALIVGLQPD----TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGI-NP 507
L PD KY++KV+A N GE +E + + P + P+ ++ + +
Sbjct: 779 RQDNLLIPDQPTFVKYHIKVVAINAKGESNVAAEEVIGYSGEDRPLEAPTNFSMQQVTSA 838
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567
TT +V W VS GYK++ W D++ I + N A + P +
Sbjct: 839 TTAYVGWNKVSEESVRGHFKGYKIQTW-TDKEGEEGMREIHTIDN--GALVTQFKPDSKN 895
Query: 568 HMRVLAFSNGGDGRMSSP 585
+ RVLA+ +GR + P
Sbjct: 896 YARVLAY----NGRFNGP 909
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 86/214 (40%), Gaps = 25/214 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G V ++C P P+ VW K+G + R G +L+I + DD G YSC
Sbjct: 266 ALRGKRVELYCIYGGTPLPQTVWLKNGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYSC 325
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
+N G +S + +H Y+ + P A + C A H E + W
Sbjct: 326 DVSNGVGQAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTIQ----WI 381
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVE 177
HNG I + N P + ++I N D G Y C +++G + + ++
Sbjct: 382 HNGKPIEQSEPN----PRRTVTNNYIKIVNLVKNDTGNYGCNATNSLGYVYKDVYLNVLA 437
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
PP ++ E + AT+ NGR IT
Sbjct: 438 LPP------EIQEPPRAEATV-------NGRNIT 458
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 37/269 (13%)
Query: 249 ENVLVP----WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+N+L+P + Y KV+A N G ++ + D+P +AP+
Sbjct: 781 DNLLIPDQPTFVKYHIKVVAINAKGESNVAAEEVIGYSGEDRPLEAPTNFSMQQVTSATT 840
Query: 305 S-ISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ + W + E YKI W K E E + N + P Y
Sbjct: 841 AYVGWNKVSEESVRGHFKGYKIQTWTDKEGEEGMRE-IHTIDNGALVTQFKPDSKNY--- 896
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PI------- 414
+V A N GP S V+ + E +P A + + + S+A +TW P+
Sbjct: 897 -ARVLAYNGRFNGPPSAVIDFDTPEGVPS-AVESLEAYPLGSSAFWLTWKKPLSPNGKLT 954
Query: 415 --ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
++ E ++G +G R +Y P T R TR + GL+P+TKY + + A
Sbjct: 955 GYKIYYEVVKGSYVGERREY----EPHITD----PRITR--MKMAGLKPNTKYRISITAT 1004
Query: 473 NNAGEGPESERYLERTYRK---APQKPPS 498
GEG +E Y+E+T AP PPS
Sbjct: 1005 TKMGEG--TELYIEKTTLGEDVAPPSPPS 1031
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 6/192 (3%)
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
++W P + + R ++ + I++ P Y + +++ +V + P Y +
Sbjct: 640 ISWEP----QGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDFSFVVQMSPWANYTFR 695
Query: 469 VMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+AYN G P + T P K P V +G P + ++W + P
Sbjct: 696 VIAYNKIGPSEPSGHSDMCTTQPDVPYKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNF 755
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
Y+V W+ D + + I + I D +YH++V+A + G+ +++ +
Sbjct: 756 QYRVS-WKRDIPAAAWENKDIYNWRQDNLLIPDQPTFVKYHIKVVAINAKGESNVAAEEV 814
Query: 588 TFQMGEEKEFKS 599
GE++ ++
Sbjct: 815 IGYSGEDRPLEA 826
>gi|351695047|gb|EHA97965.1| Neural cell adhesion molecule L1-like protein [Heterocephalus
glaber]
Length = 1126
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 247/523 (47%), Gaps = 37/523 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W++ GRR +I ENG L I + +D+G YSC
Sbjct: 355 GYSAFLHCEYFASPEAIVTWQRMDEAQALEGRRYRIHENGTLQILGTTEEDAGSYSCWVE 414
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+L C + + L + W+ +G
Sbjct: 415 NAIGKTAVTANLDIRNA-TKLRVSPKNPRVPKSHILELHCESKCDSHLKHSLKLSWSKDG 473
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ ++N E I ID L I+N + D G + C+ ++ + I+ T V V P
Sbjct: 474 ---EDFEINGTEDGRIVIDRANLTISNVTLEDQGVFSCLAQTALDSIAEATQVTVLDVPD 530
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P +Q+ E S + W GA + I+ Y + N W +E+ R
Sbjct: 531 PPRNLQLSERQNRSVRLSWEAGADHNSNISEYIVEFEGNREEPGRW---------EELTR 581
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G++ ++ L P+ Y+F+V A NE+G PS PS + TP P + P I
Sbjct: 582 VQGKETTALLQ-LAPYVRYQFRVTAVNEVGKSHPSQPSDYHETPPAAPEKNPQNIRVQAS 640
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 641 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPTV 694
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+V+VQAIN +G GPE + V ++S ED P AP NST + VTW+ I +
Sbjct: 695 YAPYDVQVQAINQLGSGPEPQSVVLYSGEDYPDTAPVVHSVDVINSTLVKVTWSTIP--K 752
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + G L G++I +WK +P+E + S RN+ ++ L +++ + V+A
Sbjct: 753 DRVHGHLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNYGMVPSLDAFSEFRLTVLA 811
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W
Sbjct: 812 YNSKGVGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSW 853
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ WKK G + G K L I +S D G Y CTA
Sbjct: 171 KGDTLLLECFAEGLPTPQVEWKKMGGDLPKGRETKENYGKTLKIENISYRDKGNYRCTAN 230
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + + L C A E + W NG
Sbjct: 231 NFLGTANHDFHVIVEEPPRWRKK-PESGVYSTGSSGILLCEAEGEPQPTIK--WRVNGFP 287
Query: 124 IGN 126
IGN
Sbjct: 288 IGN 290
>gi|195173863|ref|XP_002027704.1| GL22653 [Drosophila persimilis]
gi|194114650|gb|EDW36693.1| GL22653 [Drosophila persimilis]
Length = 1309
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 263/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVT+ C APKP+ W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 444 DGRNVTLRCRVTGAPKPQVRWLRATNWL-TGGRYIVQANGDLQILDVTFSDAGQYTCYAE 502
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++G L V+ + Q P +AA ++ RC+ + L++ W +G
Sbjct: 503 NKFGNKSAEGSLTVMEH-TRITQEPQNYEVAAGQSATFRCNEAHDGNLEIEIDWWKDGQP 561
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+G+Y CV + + + + K +IV+ P P
Sbjct: 562 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGKYSCVACTRLDQATAKANLIVQDVPNAP 617
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V +
Sbjct: 618 K-LTGITCQADKAEIMWEPQGDNRSPILHYTIQFNTSFTPASWDTAFEKVPNTDF----- 671
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
S + PW+ Y F+VIA N++G +PS+ S T D P++ P + G G +
Sbjct: 672 ----SFVVQMSPWANYTFRVIAFNKIGASQPSAHSESCTTQPDVPFKNPDNVVGQGTEPN 727
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAP Y++ W++ ++++ + E+ I + P+ + +
Sbjct: 728 NLVISWTPMPEIEHNAPKFQYRVSWKRDIPAAAWENKDINEWHQNNIVITDQPT---FVK 784
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNS-TAINVTWNPIELIRE 419
Y +KV AIN+ G +E V +S ED P AP R + T+ + W P+ E
Sbjct: 785 YHIKVVAINERGESNVAAEEVIGYSGEDRPLDAPTNFTMRQITTATSAYLAWTPVS--EE 842
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E EE + + AL+ +PD+K + +++AYN GP
Sbjct: 843 SVRGHFKGYKIQTWTEKEGEEGLREIHVKGDTDTALVTQFKPDSKNFARILAYNGRFNGP 902
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P ++ + + VTW+ P + GYK+ EV
Sbjct: 903 PSAIIDFDTPEGVP-SPVQSLDAHPLGSSAFWVTWK--KPLHPNGKLTGYKIYYEEVQGS 959
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 960 FVGERREYDPHITDPRITRMKMAGLKPKTKYRISITATTKMGEG 1003
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG+ I R G +L+I + DD+G Y+C
Sbjct: 257 ALRGKRMELFCIYGGTPLPQTVWSKDGHRIQWSDRITQGHYGKSLIIRQTNFDDNGTYTC 316
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ P + +C A + W HN
Sbjct: 317 DVSNGVGNAQSFSIILEVNAIPYFTVEPDSRRPPEDEEVVFQCEAAG--FPEPKISWIHN 374
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N +D G Y C +++G + + V+
Sbjct: 375 GKPI------EQSTPNPRRTVTDNTIRIVNLVKSDTGNYGCNATNSLGYVYKDVFLNVQA 428
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P + V+ + + T G P + + TNW
Sbjct: 429 LPPEIEEPPTALSTVDGRNVTLRCRVT-----GAPKPQVRWLRATNW 470
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 30/244 (12%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS-ISWEPLPREKQ 316
Y KV+A NE G ++ + D+P AP+ + ++W P+ E
Sbjct: 785 YHIKVVAINERGESNVAAEEVIGYSGEDRPLDAPTNFTMRQITTATSAYLAWTPVSEESV 844
Query: 317 NAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVGP 374
YKI W +K E L+E G + ++F ++ ++ A N
Sbjct: 845 RGHFKGYKIQTWTEKEG----EEGLREIHVKGDTDTALVTQFKPDSKNFARILAYNGRFN 900
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PI---------ELIRENIRGR 424
GP S ++ + E +P Q + + S+A VTW P+ ++ E ++G
Sbjct: 901 GPPSAIIDFDTPEGVPSPV-QSLDAHPLGSSAFWVTWKKPLHPNGKLTGYKIYYEEVQGS 959
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+G R +Y +P T R TR + GL+P TKY + + A GEG +E Y
Sbjct: 960 FVGERREY----DPHITD----PRITR--MKMAGLKPKTKYRISITATTKMGEG--TEHY 1007
Query: 485 LERT 488
+E++
Sbjct: 1008 IEKS 1011
>gi|344235922|gb|EGV92025.1| Contactin-4 [Cricetulus griseus]
Length = 822
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 172/608 (28%), Positives = 261/608 (42%), Gaps = 85/608 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 294 GGEVIIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 353
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 354 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 412
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K++ +IV GPPG P
Sbjct: 413 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLTAAADLIVRGPPGPP 472
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + VD G+
Sbjct: 473 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GK 527
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 528 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 587
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 588 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 646
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV+ + D + + + + G N T+ +T N++G
Sbjct: 647 VKVK----------------YWRHDDKEENARKIRTVG-NQTSTKIT---------NLKG 680
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
+A+Y+L+ V AYN+AG GP S
Sbjct: 681 -----------------SALYHLA---------------------VKAYNSAGTGPSSAT 702
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 703 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 761
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
N T + + D D Y + + FS+GGDG S ++ + F +
Sbjct: 762 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISSKNSFLAF 812
Query: 601 SPALYSAS 608
S L S
Sbjct: 813 SSFLLCHS 820
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR +G L I ++D+G Y C
Sbjct: 109 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SDGILEIPNFQQEDAGSYEC 167
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+LI P++ +++ I +A ++ C A+ Y W N
Sbjct: 168 VAENSRGKNIAKGQLIFYAQPNWVQKI-NDIHVAMEESVFWECKANGRP--KPTYRWLKN 224
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 225 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 277
Query: 179 P 179
P
Sbjct: 278 P 278
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNV---HGMDESKGRLIVLHG-------PSYYEQLPPK 90
E GNL I+ V + D G Y+C TN H + LI+ + P Q P
Sbjct: 47 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 106
Query: 91 ITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ ++L C A + + +W +G I + G+LEI N
Sbjct: 107 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIARKARR-------HKSDGILEIPNF 157
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP 209
DAG YECV +++ GK K +I P + + V ++ W + NGRP
Sbjct: 158 QQEDAGSYECVAENSRGKNIAKGQLIFYAQPNWVQKINDIHV-AMEESVFW-ECKANGRP 215
Query: 210 ITHYK 214
Y+
Sbjct: 216 KPTYR 220
>gi|449274452|gb|EMC83604.1| Neural cell adhesion molecule L1-like protein, partial [Columba
livia]
Length = 1211
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 285/605 (47%), Gaps = 44/605 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P W KD +I R ++ +NG L I ++D+G Y+C A
Sbjct: 440 GYSAFLHCEIFASPAADIRWTKDESIEPLLTSRYELNKNGTLEIKETKKEDTGSYACWAA 499
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHNG 121
N G L + P + ++ L+C + + L ++ W +G
Sbjct: 500 NSVGKRAITANLDIRDATKLV-VTPKNPRVLKSHSVLLKCQSEYDSHLKHSFRLSWRKDG 558
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ +N E I +D L I++ + D G Y CV ++++ ++ ++ ++V P
Sbjct: 559 ---DELPVNSTEDGRIILDKDTLFISSVTLKDQGVYTCVARTSLDSVTAESQLVVLDVPD 615
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDR 239
P +Q+ E S + W GA++ PI I W W +E+ R
Sbjct: 616 PPEDLQLSENQNRSVRLSWKAGASHNSPINELIIEFEEDRWEPGRW---------QELTR 666
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G + ++ L P+ Y+F+V++ N +G +PS PS +Y TP P + P I
Sbjct: 667 APG-NDTTVLLSLAPYMNYQFRVVSVNAVGRSQPSKPSLRYATPPAAPDKNPENIRVEAS 725
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ + WEPL ++N P + YK+ WR++ + ++ ET+K++ + + P+
Sbjct: 726 EPDEMVMKWEPLKPMERNGPGLEYKVSWRQRGVEADWNEETVKKH---SLTLRNTPT--- 779
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+KVQA+N++G GPE V +S ED+P AP V NST + V W I +
Sbjct: 780 FVPYEIKVQAVNNLGSGPEPNVTIGYSGEDIPDAAPSDVSVDIVNSTLVKVFWFGIP--K 837
Query: 419 ENIRGRLIGHRIKYW--------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+ +RG L G+++ +W K +PE+ + ++ RN+ +I GL+ +++ + V+
Sbjct: 838 DRVRGHLRGYKVNWWKTKSMLDGKRHHPEKQFLTFVG--DRNYGMIPGLEAFSEFRLTVL 895
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
AYN+ G+GPES + T P++ P + I + +V ++W P + GY
Sbjct: 896 AYNSKGDGPESSPIVFETPEGVPEQ-PRFLRILNFDKDSVTLSWGL--PKKANGHLTGYI 952
Query: 531 VRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR-MSSPAI 587
++ +++ ++ ND + +TL + LS +Y V A + G G+ ++ +
Sbjct: 953 LQYQMINETHEIGPLNDVSVTNRSTLSWRLSGLSSSTKYKFYVKACTVKGCGKPVTEEGL 1012
Query: 588 TFQMG 592
T G
Sbjct: 1013 TMAQG 1017
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 64/172 (37%), Gaps = 24/172 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C P+P WK +G I S R + ++ + DS +Y C A+N
Sbjct: 348 GTNLVLLCEAIGNPEPTIQWKLNGAPIDSRTFRGRISAREISLTNLQLQDSAVYQCEASN 407
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYI 116
HG + + VL+ + P I + N L C D+
Sbjct: 408 KHGTILATANVNVLN-------IAPLILTSDGENYATVVGYSAFLHCEIFASPAADIR-- 458
Query: 117 WTHNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGK 167
WT + + L T ++ G LEI D G Y C ++VGK
Sbjct: 459 WTK------DESIEPLLTSRYELNKNGTLEIKETKKEDTGSYACWAANSVGK 504
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 90/239 (37%), Gaps = 46/239 (19%)
Query: 5 GGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCT 61
G +V + CNP P ++ D I R + G+L + V +DS Y C
Sbjct: 149 GDSVILHCNPPKGIPPLHIYWMNIDLQHIPQDERVSMSLKGDLYFANVEENDSRSDYCCF 208
Query: 62 A------TNVHGM----DESKGRLIVLHGPSYYEQLPPK-------ITIAAHRNLQLRCS 104
A T V M S+ I P +PP+ +T+ L L C
Sbjct: 209 AAFPTLRTIVQKMPMTLKVSRSNFIKERKPKLL--IPPESAGSSSSVTVIKGGVLLLECI 266
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 164
A E L W GN+ +E ET N G +L+I A+ AD G Y+C +
Sbjct: 267 A--EGLPTPHLSWVK---LTGNLPRDEPETENF---GKILKIEQATAADEGTYQCTASNP 318
Query: 165 VGKISTKTTVIVEGPPGL----PGGVQVV---------EVHKTSATIQWTDGATNGRPI 210
+G+ + V VE PP GGV + + TIQW NG PI
Sbjct: 319 MGRAKHEFHVHVEEPPQWIKEPEGGVYSIGTNLVLLCEAIGNPEPTIQW---KLNGAPI 374
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 13/175 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCT 61
+GG + + C E P P W K GN+ + F G +L I + D G Y CT
Sbjct: 257 KGGVLLLECIAEGLPTPHLSWVKLTGNLPRDEPETENF--GKILKIEQATAADEGTYQCT 314
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A+N G + + + V P + ++ P + NL L C A + W NG
Sbjct: 315 ASNPMGRAKHEFHVHVEEPPQWIKE-PEGGVYSIGTNLVLLCEAIGNP--EPTIQWKLNG 371
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I + T I + +TN D+ Y+C + G I V V
Sbjct: 372 APIDS------RTFRGRISAREISLTNLQLQDSAVYQCEASNKHGTILATANVNV 420
>gi|431913509|gb|ELK15184.1| Contactin-4 [Pteropus alecto]
Length = 597
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 242/524 (46%), Gaps = 44/524 (8%)
Query: 27 DGNIIGSGGRRKIFENGNLLISPVSRDD-SGIYSCTATNVHGMDESKGRLIVLHGPSYYE 85
DG G+ R I+ G++ I + R++ S + +C G E +G L
Sbjct: 15 DGTRQGALSRGVIWRKGSMRICTLGRENPSHLATC-----WGFREERGLL---------- 59
Query: 86 QLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWT------HNGVRIGNMDLNE-----LE 133
L P+ AA L+ + L ++W H +G D++ L+
Sbjct: 60 DLTPRCPPAAAATLRTPGGCCLRDGLRRPHHVWQKRHAGEHAEASLGPADVHSGRPRVLQ 119
Query: 134 T-----PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
T P+ + D G L I N AG+Y C V+++V ++S +IV GPPG P V
Sbjct: 120 TRASNSPSAHQDSAGDLMIRNIQLKHAGKYVCTVRTSVDRLSATADLIVRGPPGPPEAVT 179
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ E+ T+A + W G N PIT Y I ART ++ W VS + + VD GR +
Sbjct: 180 IDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GRTFTA 234
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
L PW YEF+ +A N +G GEPS PS + T P AP+ + GGGG +L I+
Sbjct: 235 TVVGLNPWVEYEFRSVAANAIGVGEPSRPSEKRRTEEALPEVAPANVSGGGGSKSELVIT 294
Query: 308 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
WE +P E QN Y + +R + T T+ + V R S ++ +EV+V
Sbjct: 295 WETVPEELQNGRGFGYVVAFR-PHGTAVWMLTVLASADACRYVFRNESVRPFSPFEVRVG 353
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
N+ G GP S ++SAE+ P P + +R ++T I V W +E RGR+ G
Sbjct: 354 VYNNRGEGPFSATTVVYSAEEEPTKPPASISARSLSATDIEVFW---ASAKEKNRGRVQG 410
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
+ IKYW+ D+ EE A + + I LQ Y++ V A+N AG GP S
Sbjct: 411 YEIKYWRHDDKEENARKIRTFGNQTSTKITNLQGSALYHLAVKAFNTAGTGPSSATVNVT 470
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
T + P +PP + I + + + + W V E + GYKV
Sbjct: 471 TRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKV 513
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 122/286 (42%), Gaps = 17/286 (5%)
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEV 364
+SW P P ++P Y I R +Q+ T+ E + + + EYE
Sbjct: 190 LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVSTVPELVDGRTFTATVVGLNPWVEYEF 247
Query: 365 KVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
+ A N +G G P + E +P+VAP V G + + + +TW + +N G
Sbjct: 248 RSVAANAIGVGEPSRPSEKRRTEEALPEVAPANVSGGGGSKSELVITWETVPEELQN--G 305
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV-----GLQPDTKYYVKVMAYNNAGEG 478
R G+ + + P TAV+ L+ A ++P + + V+V YNN GEG
Sbjct: 306 RGFGYVVAF----RPHGTAVWMLTVLASADACRYVFRNESVRPFSPFEVRVGVYNNRGEG 361
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S + + + P KPP+++ + ++ T + V W + GY+++ W D
Sbjct: 362 PFSATTVVYSAEEEPTKPPASISARSLSATDIEVFWASAKEKNRGR-VQGYEIKYWRHDD 420
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
A I GN I +L YH+ V AF+ G G S+
Sbjct: 421 KEENARK-IRTFGNQTSTKITNLQGSALYHLAVKAFNTAGTGPSSA 465
>gi|355559497|gb|EHH16225.1| hypothetical protein EGK_11478 [Macaca mulatta]
Length = 1225
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1019
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 529 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 635 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 693
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 694 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
>gi|109035955|ref|XP_001097680.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Macaca mulatta]
Length = 1199
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 428 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 487
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 488 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 546
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 547 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 603
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 604 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 654
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 655 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 713
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 714 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 767
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 768 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 825
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 826 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 884
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 885 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 941
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 942 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 993
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 335 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 393
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 394 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 446
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 447 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 502
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 503 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 553
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 554 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 608
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 609 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 667
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 668 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 724
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 725 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 777
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 778 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 837
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 838 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 897
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 898 I-FQTPE 903
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 244 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 303
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 304 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 360
Query: 124 IGN 126
I N
Sbjct: 361 IDN 363
>gi|355759126|gb|EHH61574.1| hypothetical protein EGM_19511 [Macaca fascicularis]
Length = 1226
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 455 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 514
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 515 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 573
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 574 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 630
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 631 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 681
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 682 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 740
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 741 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 794
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 795 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 852
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 853 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 911
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 912 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 968
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 969 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1020
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 362 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 421 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 473
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 474 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 529
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 530 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 580
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 581 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 635
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 636 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 694
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 695 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 751
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 752 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 804
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 805 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 864
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 865 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 924
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 925 I-FQTPE 930
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 271 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 330
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 331 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 387
Query: 124 IGN 126
I N
Sbjct: 388 IDN 390
>gi|402859571|ref|XP_003894226.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 2
[Papio anubis]
Length = 1225
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1019
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 529 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 635 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 693
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 694 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|402859569|ref|XP_003894225.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 1
[Papio anubis]
Length = 1209
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 778 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1003
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 513 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 619 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 677
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 678 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 788 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 847
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
I N
Sbjct: 371 IDN 373
>gi|109474014|ref|XP_001077843.1| PREDICTED: cell adhesion molecule with homology to L1CAM [Rattus
norvegicus]
Length = 1225
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 154/524 (29%), Positives = 244/524 (46%), Gaps = 38/524 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D GGR ENG L I + +D+G YSC
Sbjct: 453 GYSAFLHCEYFASPKATVVWEVADETHPLEGGRYHTHENGTLEIERTTEEDAGSYSCWVD 512
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 513 NTMGKAVITANLDIRNA-TKLRVFPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 571
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N S D G Y C ++ + S KT V V G P
Sbjct: 572 EA---FEMNGTEDGRIVIDGANLTISNISGEDQGIYSCSAQTALDSTSEKTQVTVLGVPD 628
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 629 PPRNLLLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTR 679
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 680 VRG-EETDVVLPLAPYVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQAS 738
Query: 300 KIGDLSISWE-PLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEF 357
+ ++ I W PL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 739 QPKEMIIKWGCPLKSMEQNGPGLEYRVSWKPQGAPEEWEEETVTNH------TLRVMTPT 792
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+V+VQAIN +G GPE + VT++S ED P AP NST + VTW+ I
Sbjct: 793 VYAPYDVQVQAINQLGSGPEPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIP-- 850
Query: 418 RENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+E + G L G++I +WK +P+E + S RN ++ L+P +++++ V+
Sbjct: 851 KETVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLEPFSEFHLTVL 909
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
AYN+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 910 AYNSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 952
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%), Gaps = 17/244 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWN-PIEL 416
Y Y+ +V A+N+VG S+ + P P + + + + W P++
Sbjct: 694 YVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKWGCPLKS 753
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNN 474
+ +N G + +R+ + + PEE + T N L V + P Y V+V A N
Sbjct: 754 MEQN--GPGLEYRVSWKPQGAPEE----WEEETVTNHTLRV-MTPTVYAPYDVQVQAINQ 806
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GPE + + P P + +N T V VTW + + GY++ W
Sbjct: 807 LGSGPEPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 866
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 867 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFSEFHLTVLAYNSKGAGPESEPYI-F 925
Query: 590 QMGE 593
Q E
Sbjct: 926 QTPE 929
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G+ + G L I VS D G Y CTA
Sbjct: 269 KGDTLLLECFAEGLPTPQIEWSKLGSELPKGRATIEIHEKTLKIENVSYQDRGNYRCTAN 328
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S +++ P +++ P + N L C A E + W NG+
Sbjct: 329 NLLG-KASHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGLP 385
Query: 124 IGN 126
I N
Sbjct: 386 IEN 388
>gi|380808946|gb|AFE76348.1| neural cell adhesion molecule L1-like protein precursor [Macaca
mulatta]
Length = 1225
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1019
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 529 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 635 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 693
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 694 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|402859573|ref|XP_003894227.1| PREDICTED: neural cell adhesion molecule L1-like protein isoform 3
[Papio anubis]
Length = 1171
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 272/592 (45%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K GRR +++NG L I+ + +D+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 514 NAIGKTAVTANLDIRNA-TQLRVSPKNPRIPKLHMLELHCESKCDLHLKHSLKLSWSKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 573 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W G + I+ Y + N W +E+ R
Sbjct: 630 PPENLHLSERQNRSVRLSWEAGDDHNSNISEYIVEFEGNKEDPGRW---------EELTR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VQGKKTTVIL-PLAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 793
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP + VT++S ED P AP NST + VTW+ I +
Sbjct: 794 YAPYDVKVQAINQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIP--K 851
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E V S RN ++ L +++++ V+A
Sbjct: 852 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNVLRFS-GQRNSGMVPSLDAFSEFHLTVLA 910
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 911 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 967
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 968 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSRGCGK 1019
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 221/607 (36%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ I + +F + + + + + +Y C A
Sbjct: 361 GSNGILLCEAEGEPQPTIKWRVNGSPIDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 419
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 420 SNVHGTILASANVDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 472
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V + LE ++ D G L+I + DAG Y C V++ +GK + + +
Sbjct: 473 WQKVE----EAKPLEGRRYHVYDNGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 528
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + H K + +W+ + + G
Sbjct: 529 NATQLRVSPKNPRIPKLHMLELHCE-------SKCDLHLKHSLKLSWSKD--GEAFEING 579
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 580 TE----DGRIIIDGANLTISNVTLEDQGIYCCSALTALDSAADITQVTVLDVP-DPPENL 634
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE N Y F K D E + G ++ +
Sbjct: 635 HLSERQNRSVRLSWEAGDDHNSNISE-YIVEFEGNKEDPGRWEELTRVQGKKTTVILPLA 693
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 694 P---FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 750
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 751 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 803
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP + + P P + IN T V VTW + + GY++
Sbjct: 804 INQLGSGPAPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTIPKDRVHGRLKGYQI 863
Query: 532 RVWEVDQDMS-RANDTIIPV----GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ + R + + V G + L +H+ VLA+++ G G S P
Sbjct: 864 NWWKTKSLLDGRTHPKEVNVLRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 923
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 924 I-FQTPE 929
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGETLLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 330 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 386
Query: 124 IGN 126
I N
Sbjct: 387 IDN 389
>gi|291408744|ref|XP_002720662.1| PREDICTED: cell adhesion molecule with homology to L1CAM
[Oryctolagus cuniculus]
Length = 1227
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 246/525 (46%), Gaps = 39/525 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + G R + NG L IS V+ DD+G YSC
Sbjct: 454 GYSAFLHCEFFASPEAVVSWQKVEEASPLEGERYHVHRNGTLEISNVTEDDAGSYSCWVE 513
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P + L+L C + ++ L + W +G
Sbjct: 514 NAVGKTAVTASLDIRNA-TKLSVSPKNPRVPRSHVLELHCESSSDSRLKPSLKLSWGKDG 572
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ N E I IDG L I+N + D G Y C ++ + + T V V P
Sbjct: 573 ---EAFEANGTEDGRITIDGANLTISNVTSEDQGVYSCFAQTALDNAADVTRVTVLDVPD 629
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P +Q+ S + W G ++ I+ + + N W +E+ R
Sbjct: 630 PPENLQLSHRQNRSVQLTWEAGDSHNSNISEFIVEFEGNKEEPGRW---------EELAR 680
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G K+ ++ L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 681 VPG-KDTTVLLALAPYVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHAS 739
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---EFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ W+ + + E++ ET+ + +R+ +
Sbjct: 740 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGASASVEWEEETVTNH------TLRVMTS 793
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y+V+VQA+N +G GPE + VT++S ED P AP NST + VTW+ I
Sbjct: 794 MVYAPYDVQVQAVNQLGSGPEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKVTWSTIP- 852
Query: 417 IRENIRGRLIGHRIKYWKED-------NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
++ + G L G++I +WK +P+E S RN ++ L +++++ V
Sbjct: 853 -KDRVHGHLKGYQISWWKTRSLLDGRVHPKEVKTLRFS-GQRNHGMLPSLDAFSEFHLTV 910
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+AYN+ G GPESE Y+ +T P++ P+ + + ++ T ++W
Sbjct: 911 LAYNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSW 954
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 10/241 (4%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P PQ + + + W P++ +
Sbjct: 695 YVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDKNPQNIRVHASQPKEMIIKWEPLKSM 754
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+N G + +R+ WK + + T + ++ Y V+V A N G
Sbjct: 755 EQN--GPGLEYRVT-WKPQGASASVEWEEETVTNHTLRVMTSMVYAPYDVQVQAVNQLGS 811
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GPE + + P P + +N T V VTW + + GY++ W+
Sbjct: 812 GPEPQAVTLYSGEDYPDTAPVVHGVDVVNSTLVKVTWSTIPKDRVHGHLKGYQISWWKTR 871
Query: 538 QDMS-----RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ + T+ G + L +H+ VLA+++ G G S P I FQ
Sbjct: 872 SLLDGRVHPKEVKTLRFSGQRNHGMLPSLDAFSEFHLTVLAYNSKGAGPESEPYI-FQTP 930
Query: 593 E 593
E
Sbjct: 931 E 931
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 270 KGDTLLLECFAEGLPTPQIEWNKMGGDLPKGRETKENYGKTLKIDDVSYRDRGNYRCTAS 329
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE 108
N G S +V+ P + + P ++ + L C A E
Sbjct: 330 NALGT-ASHNFHVVVEEPPRWTKKPQSAVYSSGGSGVLLCEAEGE 373
>gi|195448218|ref|XP_002071561.1| GK25863 [Drosophila willistoni]
gi|194167646|gb|EDW82547.1| GK25863 [Drosophila willistoni]
Length = 1304
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 267/588 (45%), Gaps = 33/588 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G N+T+ C APKP+ W G +GGR + NG+L I V+ D+G Y+C A
Sbjct: 444 DGRNITMRCRVFGAPKPQVKWLH-GRKWLTGGRYNVLPNGDLSIDAVTFPDAGKYTCFAI 502
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++G L V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 503 NKFGNKTAEGSLEVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLELEIEWWKDGQA 561
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D + E + + L I D+GEY CV ++ + + + K +IV+ P P
Sbjct: 562 I---DF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTKLDEATAKANLIVQDVPNAP 617
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I+W N PI HY I T++ ++W E V +
Sbjct: 618 R-LLGISCQADKAEIRWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDF----- 671
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
S + PW+ Y F+VIA N++G PS S T P++ P + G G +
Sbjct: 672 ----SFVVQMSPWANYTFRVIAFNKIGPSPPSGHSEACTTQPAVPFKNPDNVVGQGTEPT 727
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + N P +Y+++W++ +QS+ + ++ I + P+ + +
Sbjct: 728 NLVISWTPMPEIEHNGPKFHYRVYWKRDIAAAPWQSKEIDDWHQNNIVITDQPT---FVK 784
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIN G S E + +S ED P AP R +T + WNP+ E
Sbjct: 785 YHIKVAAINGNGASNVSPEEIVGYSGEDRPLEAPTNFSMRQVTTATTAYMRWNPVS--PE 842
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E EE + N AL+ + D+K + +V+AYN GP
Sbjct: 843 SVRGHFKGYKIQTWTEKEGEEGLREIHVKGDSNEALVTQFKADSKNFARVLAYNGRFNGP 902
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY-VSPSFEEEPIIGYKVRVWEVDQ 538
S T P P ++ + + +TW+ +SP+ + + GYK+ EV
Sbjct: 903 ASAVIDFDTPEGVP-SPVQSLDAYPLGSSAFFLTWKKPLSPNGK---LTGYKIYHEEVKG 958
Query: 539 DMSRAND---TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+I T A IV P +Y + ++A + G+G ++
Sbjct: 959 SYVSERQEYRKVIDDPRTTRAKIVGFKPNTKYRITIVATTKMGEGAVN 1006
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 126/614 (20%), Positives = 223/614 (36%), Gaps = 69/614 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G V ++C P P+ VW KDG+ I R G +L+I +RDD G Y+C
Sbjct: 257 ALRGKRVELYCIFGGTPLPQTVWSKDGHPIQWSDRITQGHYGKSLVIRQANRDDEGAYTC 316
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S + ++ Y+ + P A + C A + W HN
Sbjct: 317 DVSNGVGNAQSYSINLKINAIPYFTEEPDFQNAAEDEEVVFNCKAAG--FPEPTIQWIHN 374
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
G I N P + ++I + AD G Y C +++G + + ++ P
Sbjct: 375 GKPIAQSPPN----PRRTVTNNFIKIVQLTKADTGNYGCNATNSLGYVYKDVYLNVLALP 430
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVD 238
P ++ E + +T+ +GR IT ++ W + + + G
Sbjct: 431 P------EIQEAPRDESTV-------DGRNITMRCRVFGAPKPQVKWLHGRKWLTG---G 474
Query: 239 RYT--GRKEASIENVLVPWSTYEFKVIAGNELG--YGEPSSPSPQYNTPADKPYQ----- 289
RY + SI+ V P ++ A N+ G E S ++ +P
Sbjct: 475 RYNVLPNGDLSIDAVTFP-DAGKYTCFAINKFGNKTAEGSLEVKEHTRITQEPQNYEVAA 533
Query: 290 ---APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
A R +L I W W+ +F +E N
Sbjct: 534 GQSATFRCNEAHDDTLELEIEW------------------WKDGQAIDFDAEARFVKTND 575
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ E EY + D + +V +D+P AP+ + +
Sbjct: 576 NSLTIAKTMELDSGEYTCVARTKLDEATAKANLIV-----QDVPN-APR-LLGISCQADK 628
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ W P + + R ++ + I++ P Y + +++ +V + P Y
Sbjct: 629 AEIRWEP----QGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDFSFVVQMSPWANYT 684
Query: 467 VKVMAYNNAGEGPESERYLERTYRKA-PQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+V+A+N G P S T + A P K P V +G PT + ++W + P
Sbjct: 685 FRVIAFNKIGPSPPSGHSEACTTQPAVPFKNPDNVVGQGTEPTNLVISWTPMPEIEHNGP 744
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
Y+V W+ D + I + + I D +YH++V A + G +S
Sbjct: 745 KFHYRV-YWKRDIAAAPWQSKEIDDWHQNNIVITDQPTFVKYHIKVAAINGNGASNVSPE 803
Query: 586 AITFQMGEEKEFKS 599
I GE++ ++
Sbjct: 804 EIVGYSGEDRPLEA 817
>gi|195393480|ref|XP_002055382.1| GJ18818 [Drosophila virilis]
gi|194149892|gb|EDW65583.1| GJ18818 [Drosophila virilis]
Length = 1292
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 231/480 (48%), Gaps = 25/480 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+T+ C APKP+ W+ + N + +GGR + +G+L I V+ D+G Y+C A N
Sbjct: 445 GRNITMRCRVFGAPKPQVKWRHNNNWL-TGGRYNVLPSGDLEIQEVTFADNGNYTCLAVN 503
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++G L+V + Q P +AA ++ RC+ ++ LD+ W +G I
Sbjct: 504 KFGNATAEGSLVVKER-TRITQEPQNYEVAAGQSATFRCNEAHDDTLDLEIEWLKDGQPI 562
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
D + E + + L I D+GEY CV ++ + + + K +IV+ P P
Sbjct: 563 ---DF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTQLDEATAKANLIVQDVPNAPR 618
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGR 243
+ ++ A I W N PI HY I T++ ++W E V +
Sbjct: 619 LIGII-CQADKAKISWEPQGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDF------ 671
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
S + PW+ Y ++VIA N++G PS S T D PY+ P + G G + +
Sbjct: 672 ---SFVLQMSPWANYTYRVIAFNKIGPSPPSGHSEACTTQPDVPYKNPDNVVGQGTEPTN 728
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W P+P + NAPN Y++ W++ D + K+ + + IP + + +Y
Sbjct: 729 LVITWTPMPEIEHNAPNFQYRVSWKR--DIPAATWENKDIYDWRQNNLLIPDQPTFVKYH 786
Query: 364 VKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNS-TAINVTWNPIELIRENI 421
+KV AIN+ G ++E V +S ED P AP + S T V WNP+ E++
Sbjct: 787 IKVVAINERGESNVDAEEVIGYSGEDRPLEAPTNFSMQQVTSATHAYVGWNPVS--PESV 844
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
RG G++I+ W + EE T +N AL+ +PD+K Y +V+AYN GP S
Sbjct: 845 RGHFKGYKIQTWTDKEGEEGLREI--HTIQNGALVTQFKPDSKNYARVLAYNGRFNGPPS 902
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 147/619 (23%), Positives = 237/619 (38%), Gaps = 102/619 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYS 59
A E V C P+P W +G I R+ N + I + + D+G Y
Sbjct: 349 AAEDEEVIFNCKAAGHPEPTIQWIHNGKPIAQSEPNPRRTVTNNYIKIVNLVKKDTGNYG 408
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G L VL P ++ P RN+ +RC V W H
Sbjct: 409 CNATNSLGYVYKDVYLNVLALPPEIQEPPRAEATVNGRNITMRCRVFGAPKPQVK--WRH 466
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV--- 176
N + N L + G LEI +FAD G Y C+ + G + + +++V
Sbjct: 467 NNNWLTGGRYNVLPS-------GDLEIQEVTFADNGNYTCLAVNKFGNATAEGSLVVKER 519
Query: 177 ----------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR---TNWNS 223
E G + E H + ++ + +G+PI + AR TN NS
Sbjct: 520 TRITQEPQNYEVAAGQSATFRCNEAHDDTLDLE-IEWLKDGQPI-DFDAEARFVKTNDNS 577
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
I K ++ +G E V + + N + P++P
Sbjct: 578 L-------TIAKTMELDSG------EYTCVARTQLDEATAKANLIVQDVPNAP------- 617
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
R+ G + ISWE P+ +P ++Y I + +T F +
Sbjct: 618 ---------RLIGIICQADKAKISWE--PQGDNRSPILHYTIQF----NTSFTPASWD-- 660
Query: 344 GNVGIAVVRIPSEFY--------YTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQV 392
A ++PS + + Y +V A N +GP P SE T + D+P
Sbjct: 661 ----TAYEKVPSTDFSFVLQMSPWANYTYRVIAFNKIGPSPPSGHSEACT--TQPDVPYK 714
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P V +G T + +TW P+ I N +R+ WK D P A + ++ +
Sbjct: 715 NPDNVVGQGTEPTNLVITWTPMPEIEHNAPN--FQYRVS-WKRDIP---AATWENKDIYD 768
Query: 453 WA---LIVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINP 507
W L++ QP KY++KV+A N GE ++E + + P + P+ ++ +
Sbjct: 769 WRQNNLLIPDQPTFVKYHIKVVAINERGESNVDAEEVIGYSGEDRPLEAPTNFSMQQVTS 828
Query: 508 TT-VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566
T +V W VSP GYK++ W D++ I + N A + P +
Sbjct: 829 ATHAYVGWNPVSPESVRGHFKGYKIQTW-TDKEGEEGLREIHTIQN--GALVTQFKPDSK 885
Query: 567 YHMRVLAFSNGGDGRMSSP 585
+ RVLA+ +GR + P
Sbjct: 886 NYARVLAY----NGRFNGP 900
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G V +FC P P+ VW KDG + R G +L+I + DD G Y+C
Sbjct: 257 ALRGKRVELFCIYGGTPLPQTVWYKDGKRVEWNDRITQGNYGKSLVIRQANFDDEGTYNC 316
Query: 61 TATNVHGMDESKGRLIVL--HGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYI 116
+N G+D+++ I L H Y+ + P A + C A H E +
Sbjct: 317 DVSN--GVDQAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVIFNCKAAGHPEPTIQ---- 370
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
W HNG I + N P + ++I N D G Y C +++G + + V
Sbjct: 371 WIHNGKPIAQSEPN----PRRTVTNNYIKIVNLVKKDTGNYGCNATNSLGYVYKDVYLNV 426
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
LP +Q E + AT+ NGR IT
Sbjct: 427 L---ALPPEIQ--EPPRAEATV-------NGRNIT 449
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 34/265 (12%)
Query: 250 NVLVP----WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
N+L+P + Y KV+A NE G + + D+P +AP+ +
Sbjct: 773 NLLIPDQPTFVKYHIKVVAINERGESNVDAEEVIGYSGEDRPLEAPTNFSMQQVTSATHA 832
Query: 306 -ISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
+ W P+ E YKI W K E E + + S+ Y
Sbjct: 833 YVGWNPVSPESVRGHFKGYKIQTWTDKEGEEGLREIHTIQNGALVTQFKPDSKNY----- 887
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW----NP------ 413
+V A N GP S V+ + E +P Q + + S+A +TW NP
Sbjct: 888 ARVLAYNGRFNGPPSAVIDFDTPEGVPSSV-QSLEAYPLGSSAFWLTWKKPLNPNGKLTG 946
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
++ E ++G +G R +Y P T R TR + GL+P TKY + + A
Sbjct: 947 YKIYYEVVKGSYVGERREY----EPHITD----PRITR--MKMAGLKPKTKYRISITATT 996
Query: 474 NAGEGPESERYLERTYRKAPQKPPS 498
GEG +E Y+E+T +PPS
Sbjct: 997 KMGEG--TEHYIEKTTLGEDVEPPS 1019
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
++W P + + R ++ + I++ P Y + +++ ++ + P Y +
Sbjct: 631 ISWEP----QGDNRSPILHYTIQFNTSFTPASWDTAYEKVPSTDFSFVLQMSPWANYTYR 686
Query: 469 VMAYNNAGEGPESERYLERTYR-KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+A+N G P S T + P K P V +G PT + +TW + P
Sbjct: 687 VIAFNKIGPSPPSGHSEACTTQPDVPYKNPDNVVGQGTEPTNLVITWTPMPEIEHNAPNF 746
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD------LSPGK----RYHMRVLAFSNG 577
Y+V W+ D IP + DI D L P + +YH++V+A +
Sbjct: 747 QYRVS-WKRD----------IPAATWENKDIYDWRQNNLLIPDQPTFVKYHIKVVAINER 795
Query: 578 GDGRMSSPAITFQMGEEKEFKS 599
G+ + + + GE++ ++
Sbjct: 796 GESNVDAEEVIGYSGEDRPLEA 817
>gi|390339774|ref|XP_785256.3| PREDICTED: contactin-4-like [Strongylocentrotus purpuratus]
Length = 822
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 193/385 (50%), Gaps = 18/385 (4%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATN 64
VT+ C+ +AAP P W+ DG I G R + + NL+I V D G Y CTATN
Sbjct: 427 ATVTVVCDVDAAPAPTVTWQHDGQPITDGARYNLTADPPNLVIIDVQMSDGGTYQCTATN 486
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+G +G L + + P + ++ L+C A +E L++ Y+W HNGV I
Sbjct: 487 SNGTVTGEGSLDIKDA-TVITGHPDNTLVEVGQSTTLKCKAAHDEYLELTYLWEHNGVEI 545
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
DL+E+E + D G LEI +A D GEY CV + + T+ + GPPG P
Sbjct: 546 ---DLSEIERYRMR-DNGNLEIVSAQLRDGGEYTCVALTVADSDRSSATLDIAGPPGPPS 601
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
G+ V EV +A ++W G N PIT + I +T+ + W + G
Sbjct: 602 GLSV-EVENLAANLRWVPGTDNNSPITSFTIEGQTDHSDEWVELRSG-------ESAGSN 653
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ N L P+S Y F+VIA N +G G PS P T P +PS +GGGGG GD
Sbjct: 654 SVRLVN-LDPFSLYSFRVIAVNRIGRGTPSEPVEAGVKTGKTAPTASPSNVGGGGGNTGD 712
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+ P K N+ + YK+ W+K D++ S L E N I + E YT+Y
Sbjct: 713 LRITWDKFPSSKWNSETVSYKVEWQKV-DSQVSSTGLLEEPNAIIYTATLGIEL-YTQYN 770
Query: 364 VKVQAINDVGPGPESEVVTIFSAED 388
V+VQA ND G GP SE I+S ++
Sbjct: 771 VRVQAKNDEGEGPFSEWAVIYSYQE 795
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 197/495 (39%), Gaps = 42/495 (8%)
Query: 13 NPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDES 71
N EA ++ W ++G I+ + R + N L+IS + D+ +Y C A+N HGM S
Sbjct: 341 NVEAEEADQYTWYRNGEILTARDRHQFRNNLETLIISDLMTTDTAMYQCFASNDHGMIYS 400
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV------AYIWTHNGVRIG 125
+L V PP+ + +A + DV W H+G I
Sbjct: 401 AAQLSV-------RAFPPEFLSPMETDKPAPLTATVTVVCDVDAAPAPTVTWQHDGQPI- 452
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
+ N+ D L I + +D G Y+C ++ G ++ + ++ ++
Sbjct: 453 ----TDGARYNLTADPPNLVIIDVQMSDGGTYQCTATNSNGTVTGEGSLDIKD------- 501
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V+ H + ++ T H + + T W + + E++RY R
Sbjct: 502 ATVITGHPDNTLVEVGQSTTLKCKAAHDEYLELT---YLWEHNGVEIDLSEIERYRMRDN 558
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
++E V + + SS + P P G ++ +L+
Sbjct: 559 GNLEIVSAQLRDGGEYTCVALTVADSDRSSATLDIAGPPGPP-------SGLSVEVENLA 611
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+ +P N+P + I + + E+ L+ + G VR+ + ++ Y +
Sbjct: 612 ANLRWVPGTDNNSPITSFTIEGQTDHSDEWVE--LRSGESAGSNSVRLVNLDPFSLYSFR 669
Query: 366 VQAINDVGPGPESEVVT--IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
V A+N +G G SE V + + + P +P V G N+ + +TW+ + N
Sbjct: 670 VIAVNRIGRGTPSEPVEAGVKTGKTAPTASPSNVGGGGGNTGDLRITWDKFPSSKWN--S 727
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
+ +++++ K D+ + + +G++ T+Y V+V A N+ GEGP SE
Sbjct: 728 ETVSYKVEWQKVDSQVSSTGLLEEPNAIIYTATLGIELYTQYNVRVQAKNDEGEGPFSEW 787
Query: 484 YLERTYRKAPQKPPS 498
+ +Y++ + S
Sbjct: 788 AVIYSYQEGSTQDSS 802
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE--RTYRKAPQKPPSAVHIKGINPTT 509
N +V L P + Y +V+A N G G SE +T + AP PS V G N
Sbjct: 653 NSVRLVNLDPFSLYSFRVIAVNRIGRGTPSEPVEAGVKTGKTAPTASPSNVGGGGGNTGD 712
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADI-VDLSPGKRYH 568
+ +TW S + YKV +VD +S P A + ++L +Y+
Sbjct: 713 LRITWDKFPSSKWNSETVSYKVEWQKVDSQVSSTGLLEEPNAIIYTATLGIELY--TQYN 770
Query: 569 MRVLAFSNGGDGRMSSPAITFQMGE 593
+RV A ++ G+G S A+ + E
Sbjct: 771 VRVQAKNDEGEGPFSEWAVIYSYQE 795
>gi|338723805|ref|XP_003364801.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Equus caballus]
Length = 1183
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 260/592 (43%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPN-- 584
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+D L +T+ S D G Y CV +T+ +S + V P P +++
Sbjct: 585 -----DGRFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y +R ++
Sbjct: 923 ASSDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLRYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPVVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 118/604 (19%), Positives = 217/604 (35%), Gaps = 69/604 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGKPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 426 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 476
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E + + G LEI A G Y CV ++ +G +
Sbjct: 477 LPTIEWFKGAKGSALR----EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 532
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS 229
+ ++ P + + V + S T+ + + +T + N N F V
Sbjct: 533 HLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFTVD 591
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPW--STYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+H++ +V G + N + ++ +V+ P+P ++
Sbjct: 592 KDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVV----------DVPNPPFDLELTD 641
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
+ +SW P + N+P + I + ++ + G
Sbjct: 642 QLDK------------SVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGT 687
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
A +++ Y+ + V ++ P SE +AE P P V G
Sbjct: 688 QTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGSEPD 745
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G Y
Sbjct: 746 NLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVLVANVSK--YIVSGTPTFVPY 801
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+KV A N+ G PE + + P P V + +N T V W V
Sbjct: 802 LIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGH 861
Query: 526 IIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY++ W+ R + G+ + L P Y + V + G+G
Sbjct: 862 LQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNGKGEG 921
Query: 581 RMSS 584
SS
Sbjct: 922 PASS 925
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQILQVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ + ++ W NGV
Sbjct: 338 NALGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGKPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|397516456|ref|XP_003828446.1| PREDICTED: contactin-5 [Pan paniscus]
Length = 911
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 14/412 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R + +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAVLPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ ++SAT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESSATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
VKV N+ G GP S++V I SAE P AP V + + + I V W I+
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIK 900
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQS-------RVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + I + E +P+ AP V R + + W P+
Sbjct: 741 WVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEE 800
Query: 418 RENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+N G G+ + + WKE + E + Y + + P T + V
Sbjct: 801 FQN--GEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDES---------VPPLTPFEV 849
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
KV YNN G+GP S+ + + P P+ V ++ + + V W+++ S
Sbjct: 850 KVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESL 903
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 LGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|403257020|ref|XP_003921136.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1183
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 262/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + + N +
Sbjct: 528 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 587 -------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK N + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTQWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 120/603 (19%), Positives = 216/603 (35%), Gaps = 50/603 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFINVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 536
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + ++ E A +Q + + H + T W +E + E
Sbjct: 537 KDPTWI---IKQPEY----AVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPNDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
+ +SW P + N+P + I + ++ + G A +++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSP 697
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y+ + +I P SE ++E P P V G + +TW P+
Sbjct: 698 YVNYSFRVTAMNSIGKSLPSEASEQYMTKASE--PDKNPTAVEGLGSEPDNLVITWKPLN 755
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G + +++ + ++D +E ++ ++ ++ G Y +KV A N+
Sbjct: 756 GFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQALNDV 811
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G PE + + P P V + +N T V W V + GY++ W+
Sbjct: 812 GFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWK 871
Query: 536 VDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
R + G+ + L P Y + V + G+G +SP F
Sbjct: 872 TQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-ASPDRVFN 930
Query: 591 MGE 593
E
Sbjct: 931 TPE 933
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 279 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I E+ + P+ IDG + +N + Y+C + G + + V P
Sbjct: 394 PI------EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 447
>gi|343168759|ref|NP_001230200.1| contactin-5 isoform 3 precursor [Homo sapiens]
Length = 911
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 14/412 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
VKV N+ G GP S++V I SAE P AP V + + + I V W I+
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIK 900
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + + G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQS-------RVEMVNGVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + I + E +P+ AP V R + + W P+
Sbjct: 741 WVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEE 800
Query: 418 RENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+N G G+ + + WKE + E + Y + + P T + V
Sbjct: 801 FQN--GEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDES---------VPPLTPFEV 849
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
KV YNN G+GP S+ + + P P+ V ++ + + V W+++ S
Sbjct: 850 KVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESL 903
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
>gi|1305527|gb|AAA99159.1| L1-like cell adhesion molecule antigen E587 [Carassius auratus]
Length = 1232
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 161/603 (26%), Positives = 275/603 (45%), Gaps = 55/603 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-----GRRKIFENGNLLISPVSRDDSG 56
A EG V + C +P+PK W+ I SG + +GNL IS VS +DS
Sbjct: 407 ATEGQTVLLQCRTFGSPQPKVDWQ----ITNSGPALANAKMSQTSDGNLQISDVSEEDSS 462
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
+Y+C+ + M S L+VL+ + P + + + L+C + +L I
Sbjct: 463 MYTCSVS-TSNMSIS-AELVVLNRTKIVDP-PQDLRVLRGDDAVLQCRYTVDHMLKQPTI 519
Query: 117 -WTHNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W + +I + D E+P+ G L+IT+ D+G Y C + + + +S +
Sbjct: 520 QWKKDKHKITSSANDDKYTESPD-----GSLKITDVQMEDSGIYSCEISTKLDSVSATGS 574
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
++V PG P +++ E + S T+ W GA N PI+ Y I + N + E+
Sbjct: 575 IVVLDKPGSPHSLELSEKKERSVTLSWMPGAENNSPISEYVIERKEKQNPGKGHWEEY-- 632
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
R + +E L P+STY F+V N +G EPS PS Y+TPA KP P
Sbjct: 633 -----RRVPQDITHLEIHLQPYSTYHFRVRGVNGIGMSEPSPPSESYSTPAAKPDMNPEN 687
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ L I+W+ L + + N P YKI+WR++ D+ + ++ + +V
Sbjct: 688 VTSVSTDSNSLVITWQELEQRQFNGPGFKYKIYWRQEGDSHW----MESSASNPPFIVEG 743
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
P F +++KVQA+N++G GPE + +S ED+P AP V N T + V W+P
Sbjct: 744 PGTF--IPFQIKVQAVNELGAGPEPDAEIGYSGEDLPLEAPSSVAVSELNKTTVLVKWSP 801
Query: 414 IELIRENIRGRLIGHRIKYWK-------------EDNPEETAVYYLSRTTRNWALIVGLQ 460
+ +++RG L+G++I K ++ E ++ + ++ L
Sbjct: 802 VST--KSVRGHLLGYKIHVRKKGPRAHSQRGLPMQEPAAERNRVIVANGNKEEMVLSDLH 859
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSP 519
+ Y + V +N+ GEGP S+R R P+ P + +P+ +T R+ +P
Sbjct: 860 FHSNYTLTVAPFNSKGEGPHSKR---RITLATPEGAPGPLSFLTFESPSETEITLRWGAP 916
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD--IVDLSPGKRYHMRVLAFSNG 577
+ GY ++ +E S + + + LD + + DL+P +YH + A +
Sbjct: 917 DKPNGVLTGYLLQYYE-PVPGSSSTHQMKSLNLPLDTEYTLKDLNPQIQYHFSLRALTAA 975
Query: 578 GDG 580
G G
Sbjct: 976 GHG 978
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 251/630 (39%), Gaps = 96/630 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR--RKIFENGNLLISPVSRDDSGIYSCTA 62
G V + C E P P W +G I R+ +G L+++ V D+ +Y A
Sbjct: 316 GETVRLDCQAEGIPTPNITWSMNGAPIAGTDPDPRRHVSSGTLILTDVQISDTAVYHVEA 375
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH--------RNLQLRCSAHTEELLDVA 114
TN HG I+++ + +LPP+I + + L+C V
Sbjct: 376 TNKHGN-------ILINTHVHVVELPPQILTEDDLKYEATEGQTVLLQCRTFGSPQPKVD 428
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
+ T++G + N +++ G L+I++ S D+ Y C V ++ IS + V
Sbjct: 429 WQITNSGPALANAKMSQ-------TSDGNLQISDVSEEDSSMYTCSVSTSNMSISAELVV 481
Query: 175 I----VEGPPG----LPGGVQVVEVHKT------SATIQWTDGATNGRPITHYKIIARTN 220
+ + PP L G V++ T TIQW +KI + N
Sbjct: 482 LNRTKIVDPPQDLRVLRGDDAVLQCRYTVDHMLKQPTIQWKKDK--------HKITSSAN 533
Query: 221 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 280
D+YT + S++ V E I E+ S +
Sbjct: 534 ----------------DDKYTESPDGSLKITDV---QMEDSGIYSCEISTKLDSVSATGS 574
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 340
DKP +P + K +++SW +P + N+P Y I ++K +
Sbjct: 575 IVVLDKP-GSPHSLELSEKKERSVTLSW--MPGAENNSPISEYVIERKEKQNP--GKGHW 629
Query: 341 KEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG 396
+EY V + + Y+ Y +V+ +N +G P P SE + +A+ P + P+
Sbjct: 630 EEYRRVPQDITHLEIHLQPYSTYHFRVRGVNGIGMSEPSPPSESYSTPAAK--PDMNPEN 687
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V S +S ++ +TW EL + G ++I YW++ E +++ + N I
Sbjct: 688 VTSVSTDSNSLVITWQ--ELEQRQFNGPGFKYKI-YWRQ----EGDSHWMESSASNPPFI 740
Query: 457 V-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
V G + +KV A N G GPE + + + P + PS+V + +N TTV V W
Sbjct: 741 VEGPGTFIPFQIKVQAVNELGAGPEPDAEIGYSGEDLPLEAPSSVAVSELNKTTVLVKWS 800
Query: 516 YVSPSFEEEPIIGYKVRVWE------------VDQDMSRANDTIIPVGNTLDADIVDLSP 563
VS ++GYK+ V + + + + N I+ GN + + DL
Sbjct: 801 PVSTKSVRGHLLGYKIHVRKKGPRAHSQRGLPMQEPAAERNRVIVANGNKEEMVLSDLHF 860
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V F++ G+G S IT E
Sbjct: 861 HSNYTLTVAPFNSKGEGPHSKRRITLATPE 890
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C PE P P+ W++ + + R + L I VS D G Y+CTA N
Sbjct: 226 GQTLTLECIPEGLPTPEVQWERMDSPLSPARVRWLKYKRWLQIESVSEADDGEYTCTAQN 285
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + + V P Y+ + P A ++L C A E + W+ NG I
Sbjct: 286 SQGSVKHHYAVTVEAAP-YWTRRPENHLYAPGETVRLDCQA--EGIPTPNITWSMNGAPI 342
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
D + P ++ G L +T+ +D Y + G I T V +VE PP +
Sbjct: 343 AGTDPD----PRRHVSSGTLILTDVQISDTAVYHVEATNKHGNILINTHVHVVELPPQI 397
>gi|71297177|gb|AAH39255.1| CNTN5 protein [Homo sapiens]
Length = 617
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 194/412 (47%), Gaps = 14/412 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 205 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 264
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 265 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 320
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 321 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 380
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 381 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 435
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 436 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 495
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 496 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 554
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
VKV N+ G GP S++V I SAE P AP V + + + I V W I+
Sbjct: 555 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIK 606
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+GIY C
Sbjct: 18 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGIYECR 76
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 77 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 133
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 134 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 186
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + I + E +P+ AP V R + + W P+
Sbjct: 447 WVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEE 506
Query: 418 RENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+N G G+ + + WKE + E + Y + + P T + V
Sbjct: 507 FQN--GEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDES---------VPPLTPFEV 555
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
KV YNN G+GP S+ + + P P+ V ++ + + V W+++ S
Sbjct: 556 KVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESL 609
>gi|332237968|ref|XP_003268176.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Nomascus
leucogenys]
Length = 1183
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 266/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND+G PE VVT S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGP 179
+ P
Sbjct: 537 KDP 539
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|402864555|ref|XP_003896525.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Papio anubis]
Length = 1183
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L I + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGP 179
+ P
Sbjct: 537 KDP 539
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|297289132|ref|XP_001096098.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Macaca mulatta]
Length = 1183
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L I + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGP 179
+ P
Sbjct: 537 KDP 539
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|354497879|ref|XP_003511045.1| PREDICTED: contactin-1, partial [Cricetulus griseus]
Length = 528
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 265/555 (47%), Gaps = 59/555 (10%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
I+E+G+L I+ ++R+D G+Y+C A N G S G L++ A
Sbjct: 3 IWEDGSLEINNITRNDGGVYTCFAENNRGKANSTGTLVI-------------TKCAETHG 49
Query: 99 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 158
L L C V + +R+ +D N G L I NA AG Y
Sbjct: 50 LHLLCKR------SVNHQAPQPLLRVETLDAN-----------GELLIRNAQLKHAGRYT 92
Query: 159 CVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218
C ++ V S ++V GPPG PGG+++ ++ TS + W+ G+ N PI+ Y I +
Sbjct: 93 CTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTK 152
Query: 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
T + W + + G EA+ L+PW YEF+V+A N LG GEPS PS
Sbjct: 153 TILSDDWKDAK-----TDPPIIEGNMEAAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSN 207
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
+ T P APS +GGGGG +L+I+W PL RE N Y + ++ + E++
Sbjct: 208 RIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKV 267
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
T+ + G V + + T ++VKV+A N+ G GP S + I SA+D P AP V
Sbjct: 268 TVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVG 326
Query: 399 SRGFNSTAINVTWNPI-ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALI 456
+ +S+ I+V W + E I E+ ++I+YW + +E A + + T++ + A +
Sbjct: 327 VKVLSSSEISVHWKHVLEKIVES-------YQIRYWAAHD-KEAAAHRVQVTSQEYSARL 378
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L PDT+Y+++V A N+AG GP S+ +E RKAP P + + + +TW +
Sbjct: 379 ENLLPDTQYFIEVGACNSAGCGPSSD-VIEAFTRKAPPSQPPRIISSVRSGSRYIITWDH 437
Query: 517 VSPSFEEEPIIGYKVRVW---EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
V E + GYK+ + D + + I V D + Y + V A
Sbjct: 438 VVALSNESTVTGYKILYRPDGQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRA 488
Query: 574 FSNGGDGRMSSPAIT 588
S+GGDG +S I+
Sbjct: 489 HSDGGDGVVSQVKIS 503
>gi|317418924|emb|CBN80962.1| Contactin-4, partial [Dicentrarchus labrax]
Length = 944
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 261/591 (44%), Gaps = 61/591 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ I C P+ +P W+K + R I +NGNL I ++ D+G+Y+C A N
Sbjct: 364 GGDALIECKPKMSPWGVVSWRKGSEPLRESNRVSILDNGNLRIWNATKPDAGLYTCVARN 423
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 122
G+ S G + V P+ LP + + ++ L C + L++ + W N +
Sbjct: 424 QFGVASSTGSITVKE-PTIITTLPSTLDVTVGESVVLPCQVSHDPSLELKFTWFFNEQVI 482
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
G+ E G + I N AG+Y C V++ V IS ++V PG
Sbjct: 483 HFGSHG-GFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVV---PGA 538
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIGKEVDRY 240
P + V E+ T+A++ W G N PIT Y I ART ++ W V+ V+G
Sbjct: 539 PTSIHVEEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVG------ 592
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + + L PW YEF+V+A N +G GEPS PS Q T P P+ + GGGG
Sbjct: 593 -GHRLTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGS 651
Query: 301 IGDLSISWE--PLPREK------QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+L I+WE L +E N+++ IF K + + TL E + +
Sbjct: 652 RSELVITWEVSKLTQEPLTHGGGTEQLNVWHFIF--KNREAITAAVTLGERKMLLSVTSK 709
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
I + T+++ P AP V ++ +++ I V+W
Sbjct: 710 I--------------------------IQTLYTLTPEPGRAPTRVRAKSLSASEIEVSWK 743
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
L + R++G+ ++YW E+TA + + +I G++ T YY+ V AY
Sbjct: 744 --ALPWNASKKRVLGYELRYWSRSEKEDTASVQRTVGNQTSTIIRGVKGSTTYYISVRAY 801
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N AG GP S T + P +PP V N + + + W V E + GYKV
Sbjct: 802 NTAGTGPPSAAVNVTTKKPPPSQPPVKVMWNTSN-SKIILNWEQVKALENESEVTGYKV- 859
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+++ ++ SR N + NT ++ L + Y +++ F GG+G S
Sbjct: 860 LYKKNRH-SRPN---VMETNTTSVELA-LPTDEDYIIQIKPFGEGGEGSSS 905
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + S R NG L IS ++ D+G+Y C A N HG S
Sbjct: 278 CKATGKPKPSYRWMKNGENLESAEERVQVANGALSISRLTLSDTGMYQCVAGNKHGEVYS 337
Query: 72 KGRLIVLH-GPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ P + + Q+ + + + + C V++ R G+ L
Sbjct: 338 NAELRVIAVAPDFSHNQVRSQTLVKVGGDALIECKPKMSPWGVVSW-------RKGSEPL 390
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E +I +D G L I NA+ DAG Y CV ++ G S+ ++ V+ P
Sbjct: 391 RESNRVSI-LDNGNLRIWNATKPDAGLYTCVARNQFGVASSTGSITVKEP 439
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
+ +G V + C P P W++ +I +G L I ++D+G Y C
Sbjct: 177 HVAKGSTVKLECFALGNPVPSINWRRMDSIPFPRKVDMRKASGVLEIPYFQQEDAGTYEC 236
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N GM+ KG+L + P + + P + +L C A + +Y W N
Sbjct: 237 VAENSRGMNTVKGKL-SFYAPPHLIEKPQDVQKLIDESLVWECKATGKP--KPSYRWMKN 293
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G + E + + G L I+ + +D G Y+CV + G++
Sbjct: 294 GENL------ESAEERVQVANGALSISRLTLSDTGMYQCVAGNKHGEV 335
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
+P +AP+R+ ++ +SW+ LP + Y++ + +++ E + + GN
Sbjct: 720 EPGRAPTRVRAKSLSASEIEVSWKALPWNASKKRVLGYELRYWSRSEKEDTASVQRTVGN 779
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
++R T Y + V+A N G GP S V + + + P P V NS
Sbjct: 780 QTSTIIR--GVKGSTTYYISVRAYNTAGTGPPSAAVNVTTKKPPPSQPPVKVMWNTSNSK 837
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
I + W ++ + EN + G+++ Y K + + T ++ + L D Y
Sbjct: 838 II-LNWEQVKAL-EN-ESEVTGYKVLYKKNRHSRPNVM-----ETNTTSVELALPTDEDY 889
Query: 466 YVKVMAYNNAGEGPESER 483
+++ + GEG S +
Sbjct: 890 IIQIKPFGEGGEGSSSRQ 907
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 106/280 (37%), Gaps = 35/280 (12%)
Query: 4 EGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + RR I E GNL I+ V D G Y+
Sbjct: 75 EGQGVVLLCGPPPHSGDLVFSWIFNEYPTFVKQDTRRFISQETGNLYIAMVEPSDVGNYT 134
Query: 60 CTATNVHGMDESKG--RLIVLHG--------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C TN +G +VL P Q P + +A ++L C A
Sbjct: 135 CVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEIVHVAKGSTVKLECFALGNP 194
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + N R+ ++ ++ G+LEI DAG YECV +++ G +
Sbjct: 195 VPSI------NWRRMDSIPFPR--KVDMRKASGVLEIPYFQQEDAGTYECVAENSRGMNT 246
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
K + PP L Q V+ ++ W AT G+P Y+ W
Sbjct: 247 VKGKLSFYAPPHLIEKPQDVQ-KLIDESLVWECKAT-GKPKPSYR----------WMKNG 294
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
E++ E SI + + T ++ +AGN+ G
Sbjct: 295 ENLESAEERVQVANGALSISRLTLS-DTGMYQCVAGNKHG 333
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFE-EEPIIGYKVRVWEVDQDMSRANDTIIPV--GNT 553
P+++H++ I TT ++WR P + PI Y ++ +A T+ V G+
Sbjct: 539 PTSIHVEEITDTTASLSWR---PGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGHR 595
Query: 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
L A ++DLSP Y RVLA + G G S P+
Sbjct: 596 LTATVIDLSPWVEYEFRVLASNTIGTGEPSKPS 628
>gi|126336357|ref|XP_001373792.1| PREDICTED: neural cell adhesion molecule L1-like protein [Monodelphis
domestica]
Length = 1224
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 155/594 (26%), Positives = 274/594 (46%), Gaps = 45/594 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P W++ + G + NG L I +++D+G Y+C
Sbjct: 453 GYSAFLLCEVFASPPAVITWQRPSKVERLEGSHYTTYPNGTLEIKETTKEDAGPYTCWVK 512
Query: 64 NVHGMDESKGRLIVLHGPSY-YEQLPPKITIAAHR---NLQLRCSAHTEELLDVAYIWTH 119
+ G L + + L P + I +H + + C +H + L ++ W+
Sbjct: 513 SPRGEVAVTAHLTIRDATNLTVSPLNPHV-IRSHLLVLHCDIECDSHLKHSLKLS--WSK 569
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G +++N E I IDG L I+N + D G Y C+ + + + T V +
Sbjct: 570 DG---EALEINGTEDVRIIIDGDKLTISNITLEDEGLYACLANTALDRAMATTQVTILDV 626
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEV 237
P P V + E S + W G + IT + I N + W E+
Sbjct: 627 PDPPENVYLSERQNRSVRLSWEAGDNHNSAITEFIIEFEGNRDEPGKW---------AEL 677
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ G + ++ + L P+ Y+F+V N +G PSSPS + TP P + P I
Sbjct: 678 TKVQGNETTALLS-LAPYVRYQFRVRGVNAVGRSIPSSPSDYHETPPAAPDKNPENIRVE 736
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
+ ++ I WEPL +QN P + Y++ WR++ +E+ E + +R+ +
Sbjct: 737 ASQPKEMFIKWEPLNSMEQNGPGLEYRVTWRQQGVPSEWSDELATD------NTLRVMTS 790
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T Y+VKVQAIN +G GPE + +T++S ED P AP V +R NST INVTW+ I
Sbjct: 791 SVFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPLSVTTRVINSTLINVTWDRIP- 849
Query: 417 IRENIRGRLIGHRIKYWKEDN-------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+E + G L G++I +WK + P+E L R++ ++ L P +++ + V
Sbjct: 850 -KERVHGHLKGYQINWWKTKSRLDERKFPKEIQTIRLP-GDRSYGMVPSLDPFSEFKLTV 907
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+AYN+ G GPES +T P++ P+ + + ++ TV ++W P + GY
Sbjct: 908 LAYNSKGAGPESSPISFQTPEGVPEQ-PNFLKVIHVDKNTVVLSWGL--PKKAHGNLTGY 964
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ++ ++ + I + L + DL+ +Y + A ++ G G+
Sbjct: 965 SLQYQIINDTDEIGELKEINITNPSKLSWRVPDLNSTTKYKFYLRACTSKGCGK 1018
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 233/605 (38%), Gaps = 52/605 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTAT 63
G N + C E P P+ WK +G I I F G + S V + +G+Y C AT
Sbjct: 360 GSNGILLCEAEGEPAPEIEWKINGLPIDKHPLPGIVFFPGEISFSNVQLNHTGVYQCEAT 419
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYIWTHNG 121
NVHG + + VL Q P AA L C A I
Sbjct: 420 NVHGKILATANINVLDIAPLM-QTPDDEGYAAVVGYSAFLLCEVFASP---PAVITWQRP 475
Query: 122 VRIGNMDLNELET-PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ ++ + T PN G LEI + DAG Y C VKS G+++ + +
Sbjct: 476 SKVERLEGSHYTTYPN-----GTLEIKETTKEDAGPYTCWVKSPRGEVAVTAHLTIRDAT 530
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN----STWFNVSEHV-IGK 235
L V ++ + D + +H K + +W+ + N +E V I
Sbjct: 531 NLTVSPLNPHVIRSHLLVLHCDIECD----SHLKHSLKLSWSKDGEALEINGTEDVRIII 586
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ D+ T I N+ + + +A L ++ + P P +
Sbjct: 587 DGDKLT------ISNITLEDEGL-YACLANTALDRAMATTQVTILDVP-----DPPENVY 634
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-SETLKEYGNVGIAVVRIP 354
+ + +SWE + N+ + I + D + +E K GN A++ +
Sbjct: 635 LSERQNRSVRLSWEA--GDNHNSAITEFIIEFEGNRDEPGKWAELTKVQGNETTALLSLA 692
Query: 355 SEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
Y Y+ +V+ +N VG P S + P P+ + + + W P
Sbjct: 693 P---YVRYQFRVRGVNAVGRSIPSSPSDYHETPPAAPDKNPENIRVEASQPKEMFIKWEP 749
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + +N G + +R+ + ++ P E + T N ++ T Y VKV A N
Sbjct: 750 LNSMEQN--GPGLEYRVTWRQQGVPSE---WSDELATDNTLRVMTSSVFTPYDVKVQAIN 804
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GPE + + P P +V + IN T ++VTW + + GY++
Sbjct: 805 QLGSGPEPQTITVYSGEDYPDAAPLSVTTRVINSTLINVTWDRIPKERVHGHLKGYQINW 864
Query: 534 WEV-----DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
W+ ++ + TI G+ + L P + + VLA+++ G G SSP I+
Sbjct: 865 WKTKSRLDERKFPKEIQTIRLPGDRSYGMVPSLDPFSEFKLTVLAYNSKGAGPESSP-IS 923
Query: 589 FQMGE 593
FQ E
Sbjct: 924 FQTPE 928
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 8/165 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+GG + + C E P P+ WKK G + G + L I V+ D G Y C A
Sbjct: 269 KGGTLLLECFAEGLPTPQITWKKVGEDLPKGRETQENFGKTLKIEQVTHMDKGHYHCMAK 328
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + R+ V P + ++ P + N L C A E ++ W NG+
Sbjct: 329 NYKGTAIHEFRVTVEEPPRWTKK-PESAVYSIGSNGILLCEAEGEPAPEIE--WKINGLP 385
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
I L P I G + +N G Y+C + GKI
Sbjct: 386 IDKHPL-----PGIVFFPGEISFSNVQLNHTGVYQCEATNVHGKI 425
>gi|47227363|emb|CAF96912.1| unnamed protein product [Tetraodon nigroviridis]
Length = 786
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 229/520 (44%), Gaps = 54/520 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C PEA P +WKK I+ R + NG + I+ +R D+G Y+C
Sbjct: 270 ARSGSEVTLECKPEAWPPAISLWKKGNEILPRTERINLLPNGTIKIANATRQDAGSYTCI 329
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + G+L++ P+ P I + L C + LDV++ W NG
Sbjct: 330 AKNQFGTASTTGKLLITE-PTRITMRPTNTEIIVGESAVLPCQIAFDPALDVSFSWAFNG 388
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I D N E ++ G L+ I N + G+Y C++ + V +ST ++V+GPP
Sbjct: 389 QLIDFQRDGNHFERVGGSVSGDLM-IRNIQLSHGGKYVCLIDTDVESLSTSAILVVKGPP 447
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G P V V E+ ++A + WT G NG PIT Y I ART + W + +
Sbjct: 448 GPPDKVTVEEITDSTAQLSWTPGRDNGSPITGYIIQARTPFTVGW-----QAVDTVPEVI 502
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + L W YEF+V+A N +G GEPS S + T P AP+ +GGGGG
Sbjct: 503 NGNMLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDSIPDTAPTDVGGGGGT 562
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE---------------FQSETLKEYGN 345
+L I+WEP+P E QN Y I +R F+++T+ +
Sbjct: 563 KSELVITWEPVPEELQNGEGFGYIIAFRPLGMVTWTRAAISTPGVARYVFRNDTIPAFSP 622
Query: 346 VGIAV--------------VRIPSEFYY---------TEYEVKVQAINDVGPGPESEVVT 382
+ V VRI + T Y + V A N GPGP+S +
Sbjct: 623 FEVKVVYWEDDTKPDTIGKVRISGNYTVANITGLKANTVYYLSVAAFNTAGPGPQSVPIN 682
Query: 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA 442
+ E P AP + ST +++ W+P+ + ++ G+ + K + T
Sbjct: 683 STTKEPPPDRAPHNIQWTMIGST-LSLHWDPV--VAMETESKVTGYLVLLKKNHYNDITT 739
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
++ T A+ + L + Y ++V A + GEG SE
Sbjct: 740 LF-----TNQTAVELTLSTNGNYLIQVKAMSEGGEGVGSE 774
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 155/640 (24%), Positives = 244/640 (38%), Gaps = 102/640 (15%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + + GR +I +NG L I+ ++ DSG+Y C A N HG+ S
Sbjct: 188 CKANGKPKPSYSWLKNGEQVAAEGRIQI-DNGALSIAVLNLSDSGMYQCVAENKHGIIYS 246
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
+L+VL P + + P K + A ++ E +W + GN L
Sbjct: 247 SAQLMVLASPPNFSKSPLKALLKARSGSEVTLECKPEAWPPAISLW-----KKGNEILPR 301
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVK------STVGKI-----------STKTTV 174
E N+ + G ++I NA+ DAG Y C+ K ST GK+ T T +
Sbjct: 302 TERINL-LPNGTIKIANATRQDAGSYTCIAKNQFGTASTTGKLLITEPTRITMRPTNTEI 360
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
IV LP Q+ + W A NG+ I + ++ +VS ++
Sbjct: 361 IVGESAVLP--CQIAFDPALDVSFSW---AFNGQLIDFQR--DGNHFERVGGSVSGDLMI 413
Query: 235 KEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ + + G+ I+ + ST V+ G P P ++ + ++
Sbjct: 414 RNIQLSHGGKYVCLIDTDVESLSTSAILVVKG---------PPGPPDKVTVEEITDSTAQ 464
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVR 352
+ SW P +P Y I R +Q+ +T+ E N +
Sbjct: 465 L------------SWTP--GRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGNMLTAT 510
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED-MPQVAPQGVFSRGFNSTAINVTW 411
+ + EYE +V A N VG G S ED +P AP V G + + +TW
Sbjct: 511 VVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDSIPDTAPTDVGGGGGTKSELVITW 570
Query: 412 NPI--ELIRENIRGRLIGHR------------------------------------IKYW 433
P+ EL G +I R + YW
Sbjct: 571 EPVPEELQNGEGFGYIIAFRPLGMVTWTRAAISTPGVARYVFRNDTIPAFSPFEVKVVYW 630
Query: 434 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493
++D +T A I GL+ +T YY+ V A+N AG GP+S T P
Sbjct: 631 EDDTKPDTIGKVRISGNYTVANITGLKANTVYYLSVAAFNTAGPGPQSVPINSTTKEPPP 690
Query: 494 QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNT 553
+ P + I +T+ + W V E + GY V + + ND N
Sbjct: 691 DRAPHNIQWTMIG-STLSLHWDPVVAMETESKVTGYLVLL-----KKNHYNDITTLFTNQ 744
Query: 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
++ LS Y ++V A S GG+G S P ++ E
Sbjct: 745 TAVELT-LSTNGNYLIQVKAMSEGGEGVGSEPIHIHKLSE 783
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + V + C P P+ W++ I + N L I ++D+G Y C
Sbjct: 88 AAKESAVKLECFALGNPVPEISWRRTSGIPFPSKVKMKNSNAVLEIPNFQQEDAGTYECV 147
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++GRL H ++ Q ++ NL C A+ + +Y W NG
Sbjct: 148 AENRRGKNAARGRL-SFHAKPHWLQTMADTALSIEANLFWECKANGKP--KPSYSWLKNG 204
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180
++ I ID G L I + +D+G Y+CV ++ G I S+ +++ PP
Sbjct: 205 EQVAAEG-------RIQIDNGALSIAVLNLSDSGMYQCVAENKHGIIYSSAQLMVLASPP 257
Query: 181 GL 182
Sbjct: 258 NF 259
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIVLHGPSYYEQLPPKITI----- 93
E G+L I+ V R D G Y+C N D+ S +VL + PKI +
Sbjct: 26 ETGSLYIAKVERSDVGNYTCVVNNTVTGDKVLSSPTPLVLRSDGVMGEYEPKIEVHFPES 85
Query: 94 ---AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150
A ++L C A + ++++ T +G+ ++++ N N +LEI N
Sbjct: 86 VPAAKESAVKLECFALGNPVPEISWRRT-SGIPFP----SKVKMKNSN---AVLEIPNFQ 137
Query: 151 FADAGEYECVVKSTVGK 167
DAG YECV ++ GK
Sbjct: 138 QEDAGTYECVAENRRGK 154
>gi|81158224|ref|NP_005001.3| neuronal cell adhesion molecule isoform B precursor [Homo sapiens]
Length = 1183
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND+G PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 222/607 (36%), Gaps = 58/607 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 537 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ +SW P + N+P I Y+ K Q+E G A ++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---SGTQTTAQLK 694
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ Y+ + V +I P SE ++E P P V G + +TW
Sbjct: 695 LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE--PDKNPTAVEGLGSEPDNLVITWK 752
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV A
Sbjct: 753 PLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQAL 808
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N+ G PE + + P P V + +N T V W V + GY++
Sbjct: 809 NDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIY 868
Query: 533 VWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ Q S+ N I G+ + L P Y + V + G+G +SP
Sbjct: 869 YWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-ASPD 926
Query: 587 ITFQMGE 593
F E
Sbjct: 927 RVFNTPE 933
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|410254538|gb|JAA15236.1| neuronal cell adhesion molecule [Pan troglodytes]
Length = 1183
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND+G PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 124/604 (20%), Positives = 221/604 (36%), Gaps = 52/604 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 537 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
+ +SW P + N+P + I + ++ + G A +++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSP 697
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y+ + V +I P SE ++E P P V G + +TW P+
Sbjct: 698 YVNYSFRVMAVNSIGKSLPSEASEQYLTKASE--PDKNPTAVEGLGSEPDNLVITWKPLN 755
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G + +++ + ++D +E ++ ++ ++ G Y +KV A N+
Sbjct: 756 GFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQALNDM 811
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G PE + + P P V + +N T V W V + GY++ W+
Sbjct: 812 GFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWK 871
Query: 536 VDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
Q S+ N I G+ + L P Y + V + G+G +SP F
Sbjct: 872 T-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-ASPDRVF 929
Query: 590 QMGE 593
E
Sbjct: 930 NTPE 933
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|312380248|gb|EFR26301.1| hypothetical protein AND_07751 [Anopheles darlingi]
Length = 1117
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 265/586 (45%), Gaps = 39/586 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NVT+ C APKP+ W ++ + +GGR + +G+L I V DD+G Y+C A+N
Sbjct: 384 NVTMTCRVFGAPKPQVKWVRNQREL-TGGRYQTLSSGDLFIRDVKFDDAGEYTCHASNKL 442
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G ++ G LIV + P + A RC+A + L++ W NG I
Sbjct: 443 GERQASGELIVKEH-TVINDPPQDYEVEAGTTATFRCNAVADSSLELTIEWLTNGEVI-- 499
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D + + I L I+ D G Y C+ K+ + ++ T+ V P P
Sbjct: 500 -DFDS-QPRFIRTSDNSLMISKTIELDTGIYSCLAKTELDEVMANATLTVMDRPNPPTLE 557
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKE 245
+V+ K A I+WT N PI +Y I T++ TW ++E V G ++
Sbjct: 558 RVICYGKV-AKIEWTSNGDNRSPILNYIIEYNTSFTPDTWTLLTEDVPGTDLSWVVN--- 613
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
PW+ Y ++VIA N++G PS S +T PY+ P + G + +L
Sbjct: 614 ------TTPWNNYTYRVIAVNKVGRSLPSGHSEVCSTETSVPYKCPDGVEAEGTEPNNLV 667
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I W P+ + NAP +Y+++WR+ + + S ++++ V +P+ +TEY +
Sbjct: 668 IKWNPMAQVDHNAPGFHYRVYWRRNIPSGTWSSVDVRDWRQSSYTVEGLPT---FTEYHI 724
Query: 365 KVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG--VFSRGFNSTAINVTWNPIELIRE 419
KV A+ND G GP + V +S ED P AP + STAI V+WNP+ E
Sbjct: 725 KVIAVNDRGEANSGPWEKYV--YSGEDKPLDAPTNFTLIQVTGPSTAI-VSWNPV--TPE 779
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E + EE L ALI L PD+ Y +++AYN GP
Sbjct: 780 SLRGHFKGYKIQTWTEADGEENLREVLITADAKQALITVLVPDSTNYARILAYNGRYNGP 839
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S T P+ PS + P + R+ P + GYK+ E+
Sbjct: 840 ASTTISFDT----PEGVPSTIQSLEAYPLGSSAFLLRWKRPLLPNGKLTGYKIYYEEIKG 895
Query: 539 DM---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ I L+A + L P +Y + V+A + G+G+
Sbjct: 896 TTVGPRSEREPHISDPAVLEAKLGRLKPNSKYRIHVVATTKAGEGQ 941
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 210/541 (38%), Gaps = 89/541 (16%)
Query: 1 YAGEGGNVTIF-CNPEAAPKPKFV--WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDS 55
Y E G F CN A + W +G +I + + + +L+IS D+
Sbjct: 466 YEVEAGTTATFRCNAVADSSLELTIEWLTNGEVIDFDSQPRFIRTSDNSLMISKTIELDT 525
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
GIYSC A + L V+ P+ PP + ++ C ++
Sbjct: 526 GIYSCLAKTELDEVMANATLTVMDRPN-----PPTLE-------RVICYGKVAKIE---- 569
Query: 116 IWTHNGVR---IGN--MDLNELETPNI------NIDGGLLE-ITNASFADAGEYECVVKS 163
WT NG I N ++ N TP+ ++ G L + N + + Y + +
Sbjct: 570 -WTSNGDNRSPILNYIIEYNTSFTPDTWTLLTEDVPGTDLSWVVNTTPWNNYTYRVIAVN 628
Query: 164 TVGK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT--NGRPITH 212
VG+ ST+T+V P P GV+ + I+W A + P H
Sbjct: 629 KVGRSLPSGHSEVCSTETSV----PYKCPDGVEAEGTEPNNLVIKWNPMAQVDHNAPGFH 684
Query: 213 YKIIARTNWNS-TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y++ R N S TW VD R+ + L ++ Y KVIA N+ G
Sbjct: 685 YRVYWRRNIPSGTW---------SSVDVRDWRQSSYTVEGLPTFTEYHIKVIAVNDRGEA 735
Query: 272 EPSSPSPQY-NTPADKPYQAPS-----RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
S P +Y + DKP AP+ ++ G I +SW P+ E YKI
Sbjct: 736 N-SGPWEKYVYSGEDKPLDAPTNFTLIQVTGPSTAI----VSWNPVTPESLRGHFKGYKI 790
Query: 326 -FWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383
W + + E E L + V +P Y ++ A N GP S ++
Sbjct: 791 QTWTEADGEENLREVLITADAKQALITVLVPDSTNY----ARILAYNGRYNGPASTTISF 846
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN-----P 438
+ E +P Q + + S+A + W L G+L G++I Y++E P
Sbjct: 847 DTPEGVPSTI-QSLEAYPLGSSAFLLRWKRPLLPN----GKLTGYKI-YYEEIKGTTVGP 900
Query: 439 EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++S A + L+P++KY + V+A AGEG + ++ER + PP
Sbjct: 901 RSEREPHISDPAVLEAKLGRLKPNSKYRIHVVATTKAGEG--QDFHIERATSSSIGIPPD 958
Query: 499 A 499
A
Sbjct: 959 A 959
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V +FC P P+ VW K+G II + ++ +L I VS +D+G Y+C
Sbjct: 194 ALKGKQVELFCIYGGTPLPETVWTKNGRAIIWNDKIQQDNYGKSLKIRRVSSEDAGTYTC 253
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S + ++ Y+ P + A + RC A + ++ IW HN
Sbjct: 254 EVSNGVGNADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFRCEAAGDPSPNI--IWIHN 311
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + D G Y C +++G +
Sbjct: 312 GKPIDQSPRN----PRRVVSTNRIYFNKLEKGDTGNYGCNATNSLGYV 355
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 11/178 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR--RKIFENGNLLISPVSRDDSGIYS 59
A EG C P P +W +G I R R++ + + + + D+G Y
Sbjct: 286 AAEGETAEFRCEAAGDPSPNIIWIHNGKPIDQSPRNPRRVVSTNRIYFNKLEKGDTGNYG 345
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G L VL P + RN+ + C V ++
Sbjct: 346 CNATNSLGYVYKDVFLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGAPKPQVKWVRNQ 405
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G + G L I + F DAGEY C + +G+ +IV+
Sbjct: 406 RELTGGRYQ---------TLSSGDLFIRDVKFDDAGEYTCHASNKLGERQASGELIVK 454
>gi|432941979|ref|XP_004082933.1| PREDICTED: contactin-1a-like [Oryzias latipes]
Length = 1040
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 231/492 (46%), Gaps = 18/492 (3%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+ G V I C P AAP+P+F+WKK ++ + R + +G L I +++D G+Y+C A
Sbjct: 428 AKDGRVLIECKPRAAPRPRFIWKKGEELLFNSTRISVMTDGTLEIRNATKNDEGLYTCFA 487
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + G L + S P + + LRCSA + +LD+ ++W +
Sbjct: 488 ENDRGKANNSGYLTITEATS-ITVAPEDSEVKVGDEVILRCSASHDPMLDITFVWAVD-F 545
Query: 123 RIGNMDLNELETPNI-NIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
R+ + D + N DG G L I NA G Y C ++ V + V G P
Sbjct: 546 RVIDFDSEWQHYERVMNQDGTGDLRIKNAQIWHEGRYTCTAQTVVDSDKAYADLKVVGVP 605
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEV 237
G PG ++V E+ T + WT GA + PI +Y I R W W N S +
Sbjct: 606 GPPGVIRVEEIGDTWVKLVWTKGAEHNSPILYYTIQTRHFWALNEDDWKNASTSPTFLD- 664
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E + L PW Y+F+++A NE G GE S PS + T P +P+ + G
Sbjct: 665 ----GTVERAEVTDLYPWLEYQFRIVATNEYGSGEASIPSLKIKTWDAPPVVSPTDVAGY 720
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIAVVR 352
GG+ G++ I+W P+ Y + ++ + ++ ET+ + Y +
Sbjct: 721 GGRNGEIIITWTPVQPWFFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHKDTYFFP 780
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+F E++VK+++ N G GP S I+ D+P +P +++R +ST V W
Sbjct: 781 TEEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTESPTDIYARPVSSTEAVVWWL 840
Query: 413 PIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ ++ + G+++KYW++ D+PE A T N + + PD+ Y ++V A
Sbjct: 841 PVVDTGTGLQQYVEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDSHYLIEVRA 900
Query: 472 YNNAGEGPESER 483
+N AG GP E
Sbjct: 901 FNGAGLGPPGEH 912
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 126/602 (20%), Positives = 224/602 (37%), Gaps = 66/602 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T+ C P P W KDG + G G L S ++ DDSG+Y C A N
Sbjct: 346 GSEHTMRCVASGKPFPFIRWYKDGYMYG---------KGELKFSSLTFDDSGMYQCIAEN 396
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT------ 118
G+ + L V+ +E P K + ++ ++ +IW
Sbjct: 397 FWGIKYANAELRVIACAPTFEFNPVKKQLLGAKDGRVLIECKPRAAPRPRFIWKKGEELL 456
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N RI M G LEI NA+ D G Y C ++ GK + + +
Sbjct: 457 FNSTRISVMT------------DGTLEIRNATKNDEGLYTCFAENDRGKANNSGYLTITE 504
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ + EV I + + P+ + ++ F+ SE + V
Sbjct: 505 ATSITVAPEDSEVKVGDEVILRCSASHD--PMLDITFVWAVDFRVIDFD-SEWQHYERVM 561
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G + I+N + W + A Q +DK Y +G G
Sbjct: 562 NQDGTGDLRIKNAQI-WHEGRYTCTA--------------QTVVDSDKAYADLKVVGVPG 606
Query: 299 G----KIGDLSISWEPLPREK---QNAPNIYYKI----FWRKKNDTEFQSETLKEYGNVG 347
++ ++ +W L K N+P +YY I FW D + T + +
Sbjct: 607 PPGVIRVEEIGDTWVKLVWTKGAEHNSPILYYTIQTRHFWALNEDDWKNASTSPTFLDGT 666
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + + EY+ ++ A N+ G G S + I + + P V+P V G +
Sbjct: 667 VERAEVTDLYPWLEYQFRIVATNEYGSGEASIPSLKIKTWDAPPVVSPTDVAGYGGRNGE 726
Query: 407 INVTWNPIE--LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
I +TW P++ G ++ + +W E + Y+ + T + Q
Sbjct: 727 IIITWTPVQPWFFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHKDTYFFPTEEDFQ 786
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV--S 518
++ VK+ ++N G+GP S + R P + P+ ++ + ++ T V W V +
Sbjct: 787 V-REFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTESPTDIYARPVSSTEAVVWWLPVVDT 845
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ ++ + GY+V+ W D + I + ++ P Y + V AF+ G
Sbjct: 846 GTGLQQYVEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDSHYLIEVRAFNGAG 905
Query: 579 DG 580
G
Sbjct: 906 LG 907
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTAT 63
+++ C A P + W++D ++ GNL+I+ P+ + +G Y C A
Sbjct: 58 ISMNCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPIQKKHAGTYVCVAK 117
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
N++G SK + + E+ P + +++ + + L C +V Y W +
Sbjct: 118 NIYGTVISKEARVKF---GFVEEFPDEEREPVSVKEGQGVVLLCVPPKAWPEEVTYRWIY 174
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS-TVGK-ISTKTTVIVE 177
N + L+ ++ G L I+ DAG Y C V S +GK + +K T ++
Sbjct: 175 NEFPVF---LHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVYSKFTTLIP 231
Query: 178 GPP 180
PP
Sbjct: 232 LPP 234
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTA 62
N+T+ C P P VW+K D + + +I E+G +L + V +D G Y C A
Sbjct: 256 ASNITLECFALGNPIPHIVWRKVDSTDLPAN--HEISESGAVLHLYNVQYEDVGGYECEA 313
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G D K L V P + E + ++ I + +RC A + + W +G
Sbjct: 314 INTKGKDWHKAWLYVESAPEWAETINNTQVDIGSEHT--MRCVASGKPFPFIR--WYKDG 369
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
G G L+ ++ +F D+G Y+C+ ++ G
Sbjct: 370 YMYGK---------------GELKFSSLTFDDSGMYQCIAENFWG 399
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 22/191 (11%)
Query: 4 EGGNVTIFC-NPEAAPKP---KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIY 58
EG V + C P+A P+ ++++ + + + RR + + GNL IS V D+G Y
Sbjct: 150 EGQGVVLLCVPPKAWPEEVTYRWIYNEFPVFLHTDRRRFVSQKTGNLYISKVEAQDAGNY 209
Query: 59 SCTATN--VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEE 109
SC ++ + SK ++ P ++ P I T N+ L C A
Sbjct: 210 SCFVSSPIIGKSVYSKFTTLIPLPPDDGQKYPADINVKFGDTTAMLASNITLECFALGNP 269
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + +W ++ + DL I+ G +L + N + D G YEC +T GK
Sbjct: 270 IPHI--VWR----KVDSTDLPA--NHEISESGAVLHLYNVQYEDVGGYECEAINTKGKDW 321
Query: 170 TKTTVIVEGPP 180
K + VE P
Sbjct: 322 HKAWLYVESAP 332
>gi|31874098|emb|CAD97960.1| hypothetical protein [Homo sapiens]
Length = 1183
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND+G PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPLSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP T + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIPTNKT-RWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 128/607 (21%), Positives = 222/607 (36%), Gaps = 58/607 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 537 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ +SW P + N+P I Y+ K Q+E G A ++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---SGTQTTAQLK 694
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ Y+ + V +I P SE ++E P P V G + +TW
Sbjct: 695 LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE--PDKNPTAVEGLGSEPDNLVITWK 752
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV A
Sbjct: 753 PLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQAL 808
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N+ G PE + + P P V + +N T V W V + GY++
Sbjct: 809 NDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIY 868
Query: 533 VWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ Q S+ N I G+ + L P Y + V + G+G +SP
Sbjct: 869 YWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPLSHYTLNVRVVNGKGEGP-ASPD 926
Query: 587 ITFQMGE 593
F E
Sbjct: 927 RVFNTPE 933
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|297681291|ref|XP_002818391.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Pongo abelii]
Length = 1183
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 265/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 18/183 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNDYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 536
Query: 177 EGP 179
+ P
Sbjct: 537 KDP 539
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 447
>gi|410952026|ref|XP_003982690.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Felis catus]
Length = 1184
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 170/594 (28%), Positives = 262/594 (44%), Gaps = 49/594 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------D 578
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
EL + +D LE+ + +D G Y CV +T+ +S + V P P ++
Sbjct: 579 NGELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVDVPNPPFDLE 638
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKE 245
+ + S + WT G N PIT + I + W + +E +
Sbjct: 639 LTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----------VSGTQ 688
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+ + L P+ Y F+V+A N LG PS PS QY T A +P P+ + G G + +L
Sbjct: 689 TTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVEGLGSEPDNLV 748
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 749 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGTPTF--VPYLI 803
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KVQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG
Sbjct: 804 KVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGH 861
Query: 425 LIGHRIKYWK------EDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
L G+RI YWK + N L+ + ++ ++ GL+P + Y + V N GE
Sbjct: 862 LQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGE 921
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 922 GPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEYTLKYQPIN 978
Query: 538 --QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A + G G +++ A+T
Sbjct: 979 STHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEEAVT 1031
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G ++ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--SLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 426 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 476
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + G+ +++ + N G LEI A G Y CV ++ +G +
Sbjct: 477 LPTIEWFKGAK-GSALRDDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 532
Query: 173 TVIVEGP 179
+ ++ P
Sbjct: 533 HLEIKDP 539
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTFYRNFKK-TLQIIQVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NALGAIHHTISVTVKAAP-YWILAPQNLVLSPGEDGSLICRANGNPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|395516502|ref|XP_003762426.1| PREDICTED: neural cell adhesion molecule L1-like protein [Sarcophilus
harrisii]
Length = 1266
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/595 (26%), Positives = 270/595 (45%), Gaps = 46/595 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + +FC+ A+P W+K + G +NG L I +++D+G Y+C
Sbjct: 456 GYSAYLFCDVFASPPAVITWQKPSKVERLEGPHYTTHQNGTLEIKKTTKEDAGPYTCWVK 515
Query: 64 NVHGMDESKGRLIVLHGPSY-YEQLPPKITIAAHR---NLQLRCSAHTEELLDVAYIWTH 119
+ G L + + L P + I +H + ++ C +H + L +++
Sbjct: 516 SPRGEVAVTAHLAIRDATNLTISPLNPHV-IKSHLLVLHCEIECDSHLKHSLKLSWSKDE 574
Query: 120 NGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ G D++ I IDG L I+N + D G Y C V + + T VI+
Sbjct: 575 EALEANGTEDISR-----ITIDGDKLTISNVTLEDEGSYSCHVNTALDGAVATTQVIILD 629
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--E 236
P P + + E S + W G ++ IT + I N + GK E
Sbjct: 630 VPDPPENLHISERQNRSVRLTWEAGDSHNSIITEFIIEFEGNKDEP---------GKWAE 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + G + ++ + L P+ Y+F+VI N +G PS PS + TP P + P I
Sbjct: 681 LTKIQGNETTALLS-LAPYVKYQFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPDNIKV 739
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
+ ++ I WEPL ++N P + Y++ WR++ +E+ E + +R+ +
Sbjct: 740 EASQPKEMFIKWEPLKSMERNGPGLEYRVSWRQQGVPSEWSDELATD------NTLRVMT 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T Y+VKVQAIN +G GPE + +T++S ED P AP V + NST INVTW+ I
Sbjct: 794 SSVFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPSSVSASVINSTLINVTWDRIP 853
Query: 416 LIRENIRGRLIGHRIKYWKEDN-------PEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+E + G L G++I +WK + P+E L+ R++ ++ L P +++ +
Sbjct: 854 --KERVHGHLRGYQINWWKTKSRLDERKFPKEIKTLRLA-GDRSYGMVPSLDPFSEFKLT 910
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+AYN+ G GPES +T P++P +K IN V + P + G
Sbjct: 911 VLAYNSKGAGPESTPISFQTPEGVPEQP---TFLKVINADKDTVVLSWGLPKKAHGNLTG 967
Query: 529 YKVRVWEVDQDMSRANDTIIPVGN--TLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
Y ++ ++ I V N L + DL+ +Y + A ++ G G+
Sbjct: 968 YNLQYQIINDTDEIGELKEINVTNPSKLSWRVPDLNSTTKYKFYLRACTSKGCGK 1022
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 15/263 (5%)
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQ 395
+E K GN A++ + Y +Y+ +V +N VG S+ + P P
Sbjct: 679 AELTKIQGNETTALLSLAP---YVKYQFRVIGVNAVGRSLPSDPSDYHETPPAAPDKNPD 735
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
+ + + W P++ + N G + +R+ + ++ P E + T N
Sbjct: 736 NIKVEASQPKEMFIKWEPLKSMERN--GPGLEYRVSWRQQGVPSE---WSDELATDNTLR 790
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
++ T Y VKV A N G GPE + + P PS+V IN T ++VTW
Sbjct: 791 VMTSSVFTPYDVKVQAINQLGSGPEPQTITVYSGEDYPDAAPSSVSASVINSTLINVTWD 850
Query: 516 YVSPSFEEEPIIGYKVRVWEV-----DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + GY++ W+ ++ + T+ G+ + L P + +
Sbjct: 851 RIPKERVHGHLRGYQINWWKTKSRLDERKFPKEIKTLRLAGDRSYGMVPSLDPFSEFKLT 910
Query: 571 VLAFSNGGDGRMSSPAITFQMGE 593
VLA+++ G G S+P I+FQ E
Sbjct: 911 VLAYNSKGAGPESTP-ISFQTPE 932
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 8/165 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+GG + + C E P P+ W K G + G + L I V+ D G Y C A
Sbjct: 272 KGGTLLLECFAEGLPTPQITWMKVGEDLPKGREERENFGKTLKIEQVTHMDKGHYRCMAK 331
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + R+ V P + ++ P + N L C A E ++ + +
Sbjct: 332 NYKGTATHEFRVTVEEPPRWTKK-PESAVYSIGSNGILLCEAEGEPAPEIEW-------K 383
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
I + +N+ P I G + N G Y+C + GKI
Sbjct: 384 INGLPVNKHSLPGIVFFPGEISFNNIQLNHTGVYQCEATNVHGKI 428
>gi|195049599|ref|XP_001992750.1| GH24930 [Drosophila grimshawi]
gi|193893591|gb|EDV92457.1| GH24930 [Drosophila grimshawi]
Length = 1298
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/590 (26%), Positives = 270/590 (45%), Gaps = 39/590 (6%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
++ G N+T+ C APKP+ W+++ N + +GGR + +G+L I V+ D+G Y+C
Sbjct: 441 FSVNGRNITMKCRVFGAPKPQVKWRQNNNWL-TGGRYTVLASGDLEIKDVAFADNGNYTC 499
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G ++G L+V + Q P +AA ++ RC+ + L++ W +
Sbjct: 500 LAVNKFGNATAQGSLVVRER-TRITQEPQNYEVAAGQSATFRCNEAHDPNLNLTIEWLKD 558
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G N+D + E + + L I D+GEY CV ++ + + + + +IV+ P
Sbjct: 559 G---QNIDF-DAEARFVKTNDNSLTIAKTMELDSGEYTCVARTELDEATARANLIVQDVP 614
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDR 239
P + + A I W N PI HY I T++ ++W + V +
Sbjct: 615 NAPKLIGIT-CQDDKAEISWEPQGDNRSPILHYTIQYNTSFTPASWDRAFDKVPSTDF-- 671
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
S + PW+ Y ++VIA N++G PS S T + P++ P + G G
Sbjct: 672 -------SFVVQMSPWANYTYRVIAFNKIGQSPPSGHSDACTTQPNVPFKNPENVVGQGT 724
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ +L I W P+P + NAPN Y++ W++ ++++ + ++ + + P+
Sbjct: 725 EPNNLVIEWTPMPEIEHNAPNFQYRVSWKRDIPAAAWENKDIYDWRQSNLLIADQPT--- 781
Query: 359 YTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN--VTWNPIE 415
+ +Y +KV AIN+ G +E V +S ED P AP FS ++A N + WNP+
Sbjct: 782 FVKYHIKVVAINERGESNVAAEEVIGYSGEDRPLEAPTN-FSMQHVTSATNAYLGWNPVS 840
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
E++RG G++I+ W + EE T + AL+ +PD+K Y +V+ YN
Sbjct: 841 --EESVRGHFKGYKIQTWTDKEGEEGLREI--HTIHSKALVTQFKPDSKNYARVLVYNGR 896
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW-RYVSPSFEEEPIIGYKVRVW 534
GP S T P+ PSAV P W + P + GYK+ +
Sbjct: 897 FNGPPSAVIDFDT----PEGVPSAVQSLEAYPLGSSAFWLTWKKPLNPNGKLTGYKI-YY 951
Query: 535 EVDQ----DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
EV + D R D I + L P +Y + + A + G+G
Sbjct: 952 EVVRGSFVDERREYDPHITDPRITRMKMAGLKPNTKYRISITATTKMGEG 1001
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 123/612 (20%), Positives = 228/612 (37%), Gaps = 65/612 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII--------GSGGRRKIFENGNLLISPVSRD 53
A G V ++C P P+ VW KDG + G+ G+ + NL +
Sbjct: 257 ALRGKRVELYCIYGGTPLPQTVWYKDGQRVQWSDHITQGNYGKSLVIRQANL-------N 309
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELL 111
D+G Y+C +N G +S + +H Y+ + P A + C A H E +
Sbjct: 310 DAGTYNCDVSNGVGNAQSYSINLKIHAIPYFTEEPEIQNAAEDEEVVFNCKAAGHPEPTI 369
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
W HNG I + N P + ++I N D G Y C +++G +
Sbjct: 370 Q----WIHNGKPIAQSEPN----PRRTVTNSYIKIVNLVKKDTGNYGCNATNSLGYVYKD 421
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT-HYKIIARTNWNSTWFNVSE 230
+ V+ LP +Q E + ++ NGR IT ++ W +
Sbjct: 422 VYLNVQ---ALPPEIQ--EPPRAEFSV-------NGRNITMKCRVFGAPKPQVKWRQNNN 469
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTY-EFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+ G RYT +E V ++ + +A N+ +G ++ + Q
Sbjct: 470 WLTG---GRYTVLASGDLEIKDVAFADNGNYTCLAVNK--FGNATAQGSLVVRERTRITQ 524
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGI 348
P G+ + + + PN+ I W K + +F +E N
Sbjct: 525 EPQNYEVAAGQSATFRCN-------EAHDPNLNLTIEWLKDGQNIDFDAEARFVKTNDNS 577
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+ E EY + D E+ +D+P AP+ + + A
Sbjct: 578 LTIAKTMELDSGEYTCVARTELD-----EATARANLIVQDVPN-APKLIGITCQDDKA-E 630
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
++W P + + R ++ + I+Y P + + +++ +V + P Y +
Sbjct: 631 ISWEP----QGDNRSPILHYTIQYNTSFTPASWDRAFDKVPSTDFSFVVQMSPWANYTYR 686
Query: 469 VMAYNNAGEGPESERYLERTYR-KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+A+N G+ P S T + P K P V +G P + + W + P
Sbjct: 687 VIAFNKIGQSPPSGHSDACTTQPNVPFKNPENVVGQGTEPNNLVIEWTPMPEIEHNAPNF 746
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
Y+V W+ D + + I + I D +YH++V+A + G+ +++ +
Sbjct: 747 QYRVS-WKRDIPAAAWENKDIYDWRQSNLLIADQPTFVKYHIKVVAINERGESNVAAEEV 805
Query: 588 TFQMGEEKEFKS 599
GE++ ++
Sbjct: 806 IGYSGEDRPLEA 817
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 108/270 (40%), Gaps = 34/270 (12%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG-GKIGDLSISWEPLPREKQ 316
Y KV+A NE G ++ + D+P +AP+ + + W P+ E
Sbjct: 785 YHIKVVAINERGESNVAAEEVIGYSGEDRPLEAPTNFSMQHVTSATNAYLGWNPVSEESV 844
Query: 317 NAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 375
YKI W K E E + + + S+ Y +V N G
Sbjct: 845 RGHFKGYKIQTWTDKEGEEGLREIHTIHSKALVTQFKPDSKNY-----ARVLVYNGRFNG 899
Query: 376 PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKY-- 432
P S V+ + E +P A Q + + S+A +TW P+ N G+L G++I Y
Sbjct: 900 PPSAVIDFDTPEGVPS-AVQSLEAYPLGSSAFWLTWKKPL-----NPNGKLTGYKIYYEV 953
Query: 433 ----WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
+ ++ E R TR + GL+P+TKY + + A GEG +E Y+E++
Sbjct: 954 VRGSFVDERREYDPHITDPRITR--MKMAGLKPNTKYRISITATTKMGEG--AEHYIEKS 1009
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
PPS T +TW +S
Sbjct: 1010 TLGEDIAPPS----------TPSLTWEQLS 1029
>gi|47222082|emb|CAG12108.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1193
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 239/530 (45%), Gaps = 52/530 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
V I C P AAP+P+F W K ++ + R I +G+L I ++DD G+Y+C A N
Sbjct: 482 RVVIECKPRAAPRPQFTWTKGKELLFNNSRLSILYDGSLEILSATKDDEGVYTCLAENGR 541
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRN-------LQLRCSAHTEELLDVAYIWTH 119
G S G L + IT+A + + LRC+A + LD+ +IW
Sbjct: 542 GRANSSGYLTITEATG--------ITVAPEDSEAKVGDEVVLRCAASFDPTLDITFIWAI 593
Query: 120 NGVRIGNMDLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ R+ + D + D G L+I N G Y C ++ V + + V
Sbjct: 594 D-FRVIDFDSEWQHYERLWRDDGSGDLKIKNVQIWHEGRYTCTAQTVVDSDTAYADLKVV 652
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN---STWFNVSEHVIG 234
G PG PG ++V E+ T + WT GA + PI ++ I R W+ W N S
Sbjct: 653 GVPGPPGVIRVEEIGNTWVKLLWTKGADHNSPILYHTIQTRHYWSLNEDDWRNAS----- 707
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
T E + L PW Y+F++IA NE G GE S PS + T P +P+ +
Sbjct: 708 ------TCSVERAEVTDLYPWLEYQFRIIATNEHGSGEASIPSLKVKTWDAAPAVSPTDV 761
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-----KEYGNVGIA 349
G GG+ G++ I+W P+ + Y + ++ + ++ ET+ + Y +
Sbjct: 762 AGYGGRNGEIVITWTPVEPWHFYGKSFGYIVAFKPHDAYDWLYETISDPETRRYVHRDSY 821
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +F E++VK+++ N G GP S I+ D+P P V++R +ST V
Sbjct: 822 FIPTEEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTEPPTDVYARPVSSTEALV 881
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
W P+ ++ + G+++KYW++ D+PE A T N + + PD Y ++
Sbjct: 882 WWLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGANRIFVPATVNQTRLENMLPDGHYLIE 941
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
V AYN AG GP E T R P +PP WRY+S
Sbjct: 942 VRAYNGAGLGPPGEHCEMFTKRAPPPEPPR--------------MWRYIS 977
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 122/582 (20%), Positives = 229/582 (39%), Gaps = 54/582 (9%)
Query: 19 KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78
KP+F K I S + G L S ++ DSG+Y C A N G+ + L V+
Sbjct: 404 KPRF---KQTCQIPSAACVSQYGKGELQFSSLTFADSGMYQCVAENYWGIKYANAELRVI 460
Query: 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 138
+E P K + R+ ++ + WT G L +I
Sbjct: 461 AFAPTFELNPVKKQLLGARDRRVVIECKPRAAPRPQFTWTK-----GKELLFNNSRLSIL 515
Query: 139 IDGGLLEITNASFADAGEYECVVKSTVGKIS-------TKTTVIVEGPPGLPGGVQVVEV 191
DG L EI +A+ D G Y C+ ++ G+ + T+ T I P V V
Sbjct: 516 YDGSL-EILSATKDDEGVYTCLAENGRGRANSSGYLTITEATGITVAPEDSEAKVGDEVV 574
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
+ +A+ T T I +++I +++S W +H + + R G + I+NV
Sbjct: 575 LRCAASFDPTLDITFIWAID-FRVI---DFDSEW----QHY--ERLWRDDGSGDLKIKNV 624
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
+ W + A + S + + P I ++ ++ +W L
Sbjct: 625 QI-WHEGRYTCTAQTVV-----DSDTAYADLKVVGVPGPPGVI-----RVEEIGNTWVKL 673
Query: 312 PREK---QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
K N+P +Y+ I + ++ + + + + + + EY+ ++ A
Sbjct: 674 LWTKGADHNSPILYHTI--QTRHYWSLNEDDWRNASTCSVERAEVTDLYPWLEYQFRIIA 731
Query: 369 INDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
N+ G G S + + + + P V+P V G + I +TW P+E + G+ G
Sbjct: 732 TNEHGSGEASIPSLKVKTWDAAPAVSPTDVAGYGGRNGEIVITWTPVEPW--HFYGKSFG 789
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW----ALIVGLQPDTK---YYVKVMAYNNAGEGPE 480
+ + + D + TR + + + + D + + VK+ ++N G+GP
Sbjct: 790 YIVAFKPHDAYDWLYETISDPETRRYVHRDSYFIPTEEDFQVREFQVKIKSFNVKGDGPY 849
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV--SPSFEEEPIIGYKVRVWEVDQ 538
S + R P +PP+ V+ + ++ T V W V + + ++ I GY+V+ W
Sbjct: 850 SLTKVIYYPRDVPTEPPTDVYARPVSSTEALVWWLPVVDTGTGLQQYIEGYQVKYWRKYD 909
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
D + I + ++ P Y + V A++ G G
Sbjct: 910 DPEPGANRIFVPATVNQTRLENMLPDGHYLIEVRAYNGAGLG 951
>gi|410972405|ref|XP_003992650.1| PREDICTED: contactin-5-like, partial [Felis catus]
Length = 680
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 194/409 (47%), Gaps = 8/409 (1%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 268 VIIQCKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILNASKSDEGKYVCQGENVFG 327
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E+ + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 328 SAETIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 386
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 387 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGIV 446
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V ++ +++AT+ W+ + N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 447 IVEDITESTATLSWSPASDNHSPISSYNLQARSPFSLGW-----QTVKTIPEIITGDMES 501
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L I
Sbjct: 502 AMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVI 561
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 562 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 620
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
N+ G GP S++V I SAE P AP V + + + I V W I+
Sbjct: 621 GVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIK 669
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + + L I V DD+G+Y C
Sbjct: 81 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRKSQ-AVLEIPNVQLDDAGLYECR 139
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 140 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 196
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + + N +E N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 197 VSL--LPQNRIEMVN-----GVLMIHNVNQSDAGMYQCLAENKYGAIFASAELKILASAP 249
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + I + E +P+ AP V R + + W P+
Sbjct: 510 WVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEE 569
Query: 418 RENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+N G G+ + + WKE + E + Y + + P T + V
Sbjct: 570 FQN--GEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDES---------VPPLTPFEV 618
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
KV YNN G+GP S+ + + P P+ V ++ + + V W+++ S
Sbjct: 619 KVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAWKHIKESL 672
>gi|296209983|ref|XP_002751798.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Callithrix
jacchus]
Length = 1183
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 166/592 (28%), Positives = 263/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + N +
Sbjct: 528 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK N + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 120/603 (19%), Positives = 215/603 (35%), Gaps = 50/603 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + +R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVITNRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 536
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + ++ E A +Q + + H + T W +E + E
Sbjct: 537 KDPTWI---IKQPEY----AVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
+ +SW P + N+P + I + ++ + G A +++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQLKLSP 697
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y+ V +I P SE ++E P P V G + +TW P+
Sbjct: 698 YVNYSFRVTAVNSIGKSLPSEASEQYLTKASE--PDKNPTAVEGLGSEPDNLVITWKPLN 755
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G + +++ + ++D +E ++ ++ ++ G Y +KV A N+
Sbjct: 756 GFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQALNDV 811
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G PE + + P P V + +N T V W V + GY++ W+
Sbjct: 812 GFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWK 871
Query: 536 VDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
R + G+ + L P Y + V + G+G +SP F
Sbjct: 872 TQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-ASPDKVFN 930
Query: 591 MGE 593
E
Sbjct: 931 TPE 933
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 279 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I E+ + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PI------EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|237858648|ref|NP_001153795.1| neurofascin isoform 7 precursor [Gallus gallus]
Length = 1179
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 272/594 (45%), Gaps = 52/594 (8%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 522
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 523 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 581
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
E D GL I + D G+Y CV + + K S K + V P P ++
Sbjct: 582 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLE 632
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKE 245
+ ++ + S + W G N PIT Y + + TW N S RY G
Sbjct: 633 LSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVN 683
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++
Sbjct: 684 SALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNME 742
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+
Sbjct: 743 ITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KVQA ND G PE E +S ED P+ AP V R NSTAI +TW + L + I+G+
Sbjct: 797 KVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R +W++ + + R RN ++ L P + Y ++++ N G+G
Sbjct: 855 LKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P SE T P P + I+ N ++++ W + P + GY +R +
Sbjct: 915 PRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG 971
Query: 539 DMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
S+ T++ N + P RY + A + GDG + SPA+
Sbjct: 972 --SKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDGEVIVEESPAL 1023
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 206/558 (36%), Gaps = 67/558 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 273 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 332
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 333 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 389
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 390 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRIL 445
Query: 184 GG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD- 238
++V++ ++T D G PI + WF + G +D
Sbjct: 446 APRNQLIKVIQYNRTR-----LDCPFFGSPIPTLR----------WFKNGQ---GNMLDG 487
Query: 239 -RYTGRKEASIENVLVPWSTYE-FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
Y + S+E + + +A N LG E + P+RI
Sbjct: 488 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQ---------VRLEVKDPTRIVR 538
Query: 297 GGGKIGDLSISWEPLPR---EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G D + +PR ++ P + + W K + + +K+ + G+ + +
Sbjct: 539 GP---EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDD-GLTIYGV 594
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + + A ++ +T+ D P+ + ++ +TW P
Sbjct: 595 AEK---DQGDYTCVASTELDKDSAKAYLTVLERPDR----PRDLELSDLAERSVKLTWIP 647
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAY 472
+ I I ++ED + + SR N + ++ L P Y +V+A
Sbjct: 648 -----GDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 702
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SERY +T P+ P+ V G + +TW ++ + P + Y
Sbjct: 703 NDVGSSLPSMPSERY--QTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRY 760
Query: 530 KVRVWEVDQDMSRANDTI 547
VR D S N+T+
Sbjct: 761 IVRWRRRDPRGSWYNETV 778
>gi|338723809|ref|XP_001491938.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Equus caballus]
Length = 1211
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 168/602 (27%), Positives = 261/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N
Sbjct: 534 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPN-- 590
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ S D G Y CV +T+ +S + V P
Sbjct: 591 -----DGRFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASSDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
+R ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLRYQPINSTHELGPVVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/608 (21%), Positives = 225/608 (37%), Gaps = 67/608 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGKPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 482
Query: 119 ------HNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G + + D+ L + G LEI A G Y CV ++ +G
Sbjct: 483 LPTIEWFKGAKGSALREDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 536
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 227
+ + ++ P + + V + S T+ + + +T + N N F
Sbjct: 537 EVHLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFT 595
Query: 228 VS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPAD 285
V +H++ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 596 VDKDHLVVTDVSDDDGGTYTCVANTTLD------TVSASAVLRVVAPTPTPAPIYDVP-- 647
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 ---NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSG 702
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRG 401
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 703 TQTTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVLVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNG 933
Query: 577 GGDGRMSS 584
G+G SS
Sbjct: 934 KGEGPASS 941
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQILQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ + ++ W NGV
Sbjct: 344 NALGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGKPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|237858641|ref|NP_001153792.1| neurofascin isoform 4 precursor [Gallus gallus]
Length = 1170
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 272/594 (45%), Gaps = 52/594 (8%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 522
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 523 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 581
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
E D GL I + D G+Y CV + + K S K + V P P ++
Sbjct: 582 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLERPDRPRDLE 632
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVIGKEVDRYTGRKE 245
+ ++ + S + W G N PIT Y + + TW N S RY G
Sbjct: 633 LSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---------RYPGNVN 683
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+ + G G + ++
Sbjct: 684 SALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNME 742
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+W PL + PN+ Y + WR+++ + +ET+K +V V P Y YE+
Sbjct: 743 ITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWNTP---IYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KVQA ND G PE E +S ED P+ AP V R NSTAI +TW + L + I+G+
Sbjct: 797 KVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWTRVHL--DTIQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R +W++ + + R RN ++ L P + Y ++++ N G+G
Sbjct: 855 LKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P SE T P P + I+ N ++++ W + P + GY +R +
Sbjct: 915 PRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG 971
Query: 539 DMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
S+ T++ N + P RY + A + GDG + SPA+
Sbjct: 972 --SKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDGEVIVEESPAL 1023
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 206/558 (36%), Gaps = 67/558 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 273 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 332
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 333 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 389
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 390 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRIL 445
Query: 184 GG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD- 238
++V++ ++T D G PI + WF + G +D
Sbjct: 446 APRNQLIKVIQYNRTR-----LDCPFFGSPIPTLR----------WFKNGQ---GNMLDG 487
Query: 239 -RYTGRKEASIENVLVPWSTYE-FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
Y + S+E + + +A N LG E + P+RI
Sbjct: 488 GNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVEAQ---------VRLEVKDPTRIVR 538
Query: 297 GGGKIGDLSISWEPLPR---EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G D + +PR ++ P + + W K + + +K+ + G+ + +
Sbjct: 539 GP---EDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNRMKKEDD-GLTIYGV 594
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + + A ++ +T+ D P+ + ++ +TW P
Sbjct: 595 AEK---DQGDYTCVASTELDKDSAKAYLTVLERPDR----PRDLELSDLAERSVKLTWIP 647
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAY 472
+ I I ++ED + + SR N + ++ L P Y +V+A
Sbjct: 648 -----GDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGNVNSALLSLSPYVNYQFRVIAV 702
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SERY +T P+ P+ V G + +TW ++ + P + Y
Sbjct: 703 NDVGSSLPSMPSERY--QTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRY 760
Query: 530 KVRVWEVDQDMSRANDTI 547
VR D S N+T+
Sbjct: 761 IVRWRRRDPRGSWYNETV 778
>gi|338723807|ref|XP_003364802.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Equus caballus]
Length = 1192
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 168/602 (27%), Positives = 261/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ S D G Y CV +T+ +S + V P
Sbjct: 574 -------RFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASSDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
+R ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLRYQPINSTHELGPVVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/608 (21%), Positives = 225/608 (37%), Gaps = 67/608 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGKPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 463
Query: 119 ------HNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G + + D+ L + G LEI A G Y CV ++ +G
Sbjct: 464 LPTIEWFKGAKGSALREDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 227
+ + ++ P + + V + S T+ + + +T + N N F
Sbjct: 518 EVHLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFT 576
Query: 228 VS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPAD 285
V +H++ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 577 VDKDHLVVTDVSDDDGGTYTCVANTTLD------TVSASAVLRVVAPTPTPAPIYDVP-- 628
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 ---NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSG 683
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRG 401
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 684 TQTTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVLVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNG 914
Query: 577 GGDGRMSS 584
G+G SS
Sbjct: 915 KGEGPASS 922
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQILQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ + ++ W NGV
Sbjct: 325 NALGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGKPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|338723803|ref|XP_003364800.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Equus caballus]
Length = 1180
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 168/602 (27%), Positives = 261/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTPTVTWLKDNGELPNDG 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ S D G Y CV +T+ +S + V P
Sbjct: 574 -------RFTVDKDHLVVTDVSDDDGGTYTCVANTTLDTVSASAVLRVVAPTPTPAPIYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVLV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASSDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
+R ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLRYQPINSTHELGPVVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/608 (21%), Positives = 225/608 (37%), Gaps = 67/608 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGKPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 463
Query: 119 ------HNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
G + + D+ L + G LEI A G Y CV ++ +G
Sbjct: 464 LPTIEWFKGAKGSALREDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKN 517
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFN 227
+ + ++ P + + V + S T+ + + +T + N N F
Sbjct: 518 EVHLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTPTVTWLKDNGELPNDGRFT 576
Query: 228 VS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPAD 285
V +H++ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 577 VDKDHLVVTDVSDDDGGTYTCVANTTLD------TVSASAVLRVVAPTPTPAPIYDVP-- 628
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 ---NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSG 683
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRG 401
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 684 TQTTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVLVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKAQTSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYILNVRVVNG 914
Query: 577 GGDGRMSS 584
G+G SS
Sbjct: 915 KGEGPASS 922
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQILQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ + ++ W NGV
Sbjct: 325 NALGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGKPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|328788305|ref|XP_395296.3| PREDICTED: neuroglian [Apis mellifera]
Length = 1251
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 233/487 (47%), Gaps = 32/487 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W ++G + +GGR K ++G+L I V D+GIY+C A+
Sbjct: 439 DGKTVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSGDLEIENVIFLDAGIYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E G L+V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEVEGSGNLVVKEHTRITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D+G Y C+ + + + + T+IV+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDSGTYTCIAHTELDEAKAQATLIVQDVPNAP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ + T A+I WT N PI Y I T + + +S+ +
Sbjct: 613 KLISIT-CMATEASIHWTPMGDNRAPILRYTIQHNTTFTPDTWEISKDDV---------- 661
Query: 244 KEASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+IE V PW+ Y F+V+A N++G PS S T D PY+ P + G G
Sbjct: 662 --PAIEQTYVVPMSPWTNYTFRVLAWNKIGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGT 719
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFY 358
+L ISW +P+ + NAP Y+I++R+ E + E + ++ + V P+
Sbjct: 720 TPQNLVISWTVMPQIEHNAPKFMYRIYYRRDIPGEKWTIEDITDWKKNNLVVDNQPT--- 776
Query: 359 YTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIEL 416
Y Y++KV AIN+ G + E V +S ED+P AP ++ +ST+ +WNP+
Sbjct: 777 YQRYKIKVVAINEKGECRVAPEEVIGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVP- 835
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNA 475
E++RG L G++I+ W E + E+ R R AL+ P +K YV+++AYN
Sbjct: 836 -EESVRGELKGYKIQTWTEKDGEKGMREIDIRGGNRTHALVTKFIPFSKNYVRILAYNGR 894
Query: 476 GEGPESE 482
GP SE
Sbjct: 895 YSGPPSE 901
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGKKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDKGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ +C A + ++ W HN
Sbjct: 312 EASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTSNSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 34/257 (13%)
Query: 377 ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---- 432
E++ +D+P AP+ + S +T ++ W P+ R I I H +
Sbjct: 596 EAKAQATLIVQDVPN-APK-LISITCMATEASIHWTPMGDNRAPILRYTIQHNTTFTPDT 653
Query: 433 W---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERT 488
W K+D P Y +V + P T Y +V+A+N G P + T
Sbjct: 654 WEISKDDVPAIEQTY-----------VVPMSPWTNYTFRVLAWNKIGTSLPSPHSDVCTT 702
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTI 547
+ P K P V KG P + ++W V P E P Y++ +D+ TI
Sbjct: 703 LQDVPYKNPDNVMGKGTTPQNLVISWT-VMPQIEHNAPKFMYRIYY---RRDIPGEKWTI 758
Query: 548 IPVGNTLDAD-IVDLSPG-KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALY 605
+ + + +VD P +RY ++V+A + G+ R++ + GE+ ++ S
Sbjct: 759 EDITDWKKNNLVVDNQPTYQRYKIKVVAINEKGECRVAPEEVIGYSGEDVPLQAPS---- 814
Query: 606 SASTTLLLVMSSTLYIF 622
+ TL V SST F
Sbjct: 815 --NFTLNQVKSSTSAQF 829
>gi|344239440|gb|EGV95543.1| Contactin-5 [Cricetulus griseus]
Length = 577
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/557 (29%), Positives = 244/557 (43%), Gaps = 23/557 (4%)
Query: 36 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 95
R I +G+L I S+ D G Y C N+ G E L V P+ E P + +
Sbjct: 12 RIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKE-PTRIELTPKRTELTV 70
Query: 96 HRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADA 154
++ L C A + LDV + WT G I + E+ L I N A
Sbjct: 71 GESIVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHA 130
Query: 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
G Y C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ N PI+ Y
Sbjct: 131 GRYGCRVQTTADSVSDEAELLVRGPPGPPGVVIVEEITESTATLSWSPATDNHSPISSYN 190
Query: 215 IIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 274
+ AR+ ++ W ++ + TG E+++ L PW YEF+V+A N +G G+PS
Sbjct: 191 LQARSPFSLGW-----QIVKTVPEVITGDMESAMAVDLNPWVEYEFRVVASNPIGTGDPS 245
Query: 275 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW-------EPLPREKQNAPNIYYKIFW 327
PS T + Q + +L I + EP+ E QN Y + +
Sbjct: 246 IPSRMIRTNEAELRQNSQVCATLQNEPYNLQIPFSNRKNEDEPVSEEFQNGEGFGYIVAF 305
Query: 328 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
R N T E + + R S T +EVKV N+ G GP S++V I SAE
Sbjct: 306 RP-NGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAE 364
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+ + E E + RL H I YWK+ PE++A +
Sbjct: 365 GEEEEEEEEEEEEEEEEEEEEEEEE-EEEEEEEEKTRLQLHFIGYWKDMEPEDSAETVRT 423
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507
R ++ ++ GL+ DT Y++ V AYN AG GP S T R+ P +PP + +
Sbjct: 424 RGNESFVMVTGLEGDTLYHLTVRAYNGAGYGPLSRIVSATTKRRPPSEPPGNLRWEQ-QG 482
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567
+ V + W V P E ++GYKV + + +T P +V L Y
Sbjct: 483 SQVSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIETQKPQA------VVPLPEAGVY 536
Query: 568 HMRVLAFSNGGDGRMSS 584
+ V A+S GGDG SS
Sbjct: 537 IIEVRAYSEGGDGTASS 553
>gi|403257018|ref|XP_003921135.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Saimiri
boliviensis boliviensis]
gi|56122260|gb|AAV74281.1| neuronal cell adhesion protein [Saimiri boliviensis]
Length = 1180
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 263/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + + N +
Sbjct: 515 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + S D+G Y CV +T+ +S + V P
Sbjct: 574 -------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTQWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 126/616 (20%), Positives = 220/616 (35%), Gaps = 66/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFINVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 524 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPNDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A+N +G P SE ++E P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVTAMNSIGKSLPSEASEQYMTKASE--PDKNPTAVEGLGS 739
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 740 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 795
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 796 VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSI 855
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 856 RGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 915
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 916 GEGP-ASPDRVFNTPE 930
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 266 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 434
>gi|354478085|ref|XP_003501246.1| PREDICTED: neurofascin isoform 4 [Cricetulus griseus]
Length = 1169
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 247/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y I + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 684 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 964
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 225/629 (35%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVVKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y I + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVIQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVARLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|37360078|dbj|BAC98017.1| mKIAA0756 protein [Mus musculus]
Length = 1251
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 540 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 597
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 598 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 656
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 657 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 707
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + R+ G +
Sbjct: 708 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNS 760
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 761 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 819
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 820 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 872
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 873 RVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYSDTVQGQ 930
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 931 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDG 990
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 991 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYILR 1041
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 219/610 (35%), Gaps = 90/610 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 439 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 497 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 547
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 548 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 602
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 603 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 652
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 653 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 701
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 702 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQF---EEDQFQPGVWHDHSRFP 755
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 756 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 810
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 811 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 864
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 865 PVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYS 924
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 925 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVARLFPYSNYKLE 980
Query: 571 VLAFSNGGDG 580
++ + GDG
Sbjct: 981 MVVVNGRGDG 990
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 349 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 406
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 407 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 463
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 464 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 519
Query: 182 L 182
+
Sbjct: 520 M 520
>gi|403257024|ref|XP_003921138.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Saimiri
boliviensis boliviensis]
Length = 1211
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 263/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + + N +
Sbjct: 534 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + S D+G Y CV +T+ +S + V P
Sbjct: 593 -------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTQWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 126/616 (20%), Positives = 220/616 (35%), Gaps = 66/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFINVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 543 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPNDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A+N +G P SE ++E P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVTAMNSIGKSLPSEASEQYMTKASE--PDKNPTAVEGLGS 758
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 759 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 814
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 815 VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSI 874
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 875 RGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 934
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 935 GEGP-ASPDRVFNTPE 949
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 453
>gi|354478081|ref|XP_003501244.1| PREDICTED: neurofascin isoform 2 [Cricetulus griseus]
Length = 1157
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 247/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 563 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 613
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y I + F + + ++ G +
Sbjct: 614 ELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNS 666
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 667 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 725
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 726 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 778
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 779 RVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQWN--RVYSDTVQGQ 836
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 837 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDG 896
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 897 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 947
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 225/629 (35%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 509 RLEVKDPTRI-YRMPEDQVVKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 558
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 559 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 607
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y I + + +FQ ++
Sbjct: 608 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVIQFE---EDQFQPGVWHDHSKFP 661
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 662 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 716
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 717 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 770
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 771 PVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQWNRVYS 830
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 831 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVARLFPYSNYKLE 886
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 887 MVVVNGRGDGPRS---------ETKEFTT 906
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|403257026|ref|XP_003921139.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Saimiri
boliviensis boliviensis]
Length = 1304
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 263/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + + N +
Sbjct: 534 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + S D+G Y CV +T+ +S + V P
Sbjct: 593 -------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTQWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 126/616 (20%), Positives = 220/616 (35%), Gaps = 66/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFINVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 543 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPNDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A+N +G P SE ++E P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVTAMNSIGKSLPSEASEQYMTKASE--PDKNPTAVEGLGS 758
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 759 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 814
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 815 VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSI 874
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 875 RGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 934
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 935 GEGP-ASPDRVFNTPE 949
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 453
>gi|237858634|ref|NP_001153790.1| neurofascin isoform 4 precursor [Mus musculus]
Length = 1157
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 563 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 613
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + R+ G +
Sbjct: 614 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNS 666
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 667 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 725
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 726 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 778
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 779 RVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYSDTVQGQ 836
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 837 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDG 896
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 897 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYILR 947
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 225/629 (35%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 509 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 558
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 559 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 607
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 608 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSRFP 661
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 662 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 716
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 717 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 770
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 771 PVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYS 830
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 831 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVARLFPYSNYKLE 886
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 887 MVVVNGRGDGPRS---------ETKEFTT 906
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|237858627|ref|NP_001153787.1| neurofascin isoform 4 precursor [Rattus norvegicus]
Length = 1157
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 563 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 613
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 614 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 666
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 667 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 725
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 726 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 778
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 779 RVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYSDTVQGQ 836
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 837 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRGDG 896
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 897 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLR 947
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 201/555 (36%), Gaps = 77/555 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 509 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 558
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 559 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 607
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 608 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 661
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 662 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 716
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 717 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 770
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V I+ +N T + + W V
Sbjct: 771 PVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYS 830
Query: 520 SFEEEPIIGYKVRVW 534
+ + Y+ W
Sbjct: 831 DTVQGQLREYRAYYW 845
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|348578157|ref|XP_003474850.1| PREDICTED: neurofascin isoform 5 [Cavia porcellus]
Length = 1170
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDL 631
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 632 ELTDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNS 684
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 685 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 743
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 744 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI + WN + + ++G+
Sbjct: 797 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQWN--RVYSDTVQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R + R ++ L P + Y ++++ N G+G
Sbjct: 855 LREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY +R
Sbjct: 915 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILTGYTLR 965
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 203/560 (36%), Gaps = 87/560 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 527 RLEVKDPTRI-FRMPEDQVVKRGTTVQLE---------CRVKHDPSLRLTVSWLKDDEPL 576
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + P D+P
Sbjct: 577 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRP-DRP 628
Query: 288 YQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
++ DL+ ++W +P + N+P Y + + + +FQ +
Sbjct: 629 RDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYIVQFE---EDQFQPGVWHD 674
Query: 343 Y----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P
Sbjct: 675 HSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPS 729
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ G ++Y + ET + + T
Sbjct: 730 DVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRY 783
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+VG P Y ++V A N+ G+GPE + + + P+ P+ V ++ +N T + + W
Sbjct: 784 VVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQW 843
Query: 515 RYVSPSFEEEPIIGYKVRVW 534
V + + Y+ W
Sbjct: 844 NRVYSDTVQGQLREYRAYYW 863
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|348578153|ref|XP_003474848.1| PREDICTED: neurofascin isoform 3 [Cavia porcellus]
Length = 1158
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 246/537 (45%), Gaps = 51/537 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 447 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 504
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 505 AENQVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGN 563
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 564 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDL 614
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 615 ELTDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNS 667
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 668 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 726
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 727 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 779
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI + WN + + ++G+
Sbjct: 780 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQWN--RVYSDTVQGQ 837
Query: 425 LIGHRIKYWKEDN---------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
L +R YW+E + + A + RT ++ L P + Y ++++ N
Sbjct: 838 LREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTR---GVVGRLFPYSNYKLEMVVVNGR 894
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP SE T P P ++ N T+++ W + P + GY +R
Sbjct: 895 GDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILTGYTLR 948
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 203/560 (36%), Gaps = 87/560 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 346 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 404 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 454
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 455 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 509
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 510 RLEVKDPTRI-FRMPEDQVVKRGTTVQLE---------CRVKHDPSLRLTVSWLKDDEPL 559
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + P D+P
Sbjct: 560 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRP-DRP 611
Query: 288 YQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
++ DL+ ++W +P + N+P Y + + + +FQ +
Sbjct: 612 RDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYIVQFE---EDQFQPGVWHD 657
Query: 343 Y----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P
Sbjct: 658 HSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPS 712
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ G ++Y + ET + + T
Sbjct: 713 DVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRY 766
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+VG P Y ++V A N+ G+GPE + + + P+ P+ V ++ +N T + + W
Sbjct: 767 VVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQW 826
Query: 515 RYVSPSFEEEPIIGYKVRVW 534
V + + Y+ W
Sbjct: 827 NRVYSDTVQGQLREYRAYYW 846
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 256 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 313
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 314 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 370
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 371 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 426
Query: 182 L 182
+
Sbjct: 427 M 427
>gi|237858632|ref|NP_001153789.1| neurofascin isoform 3 precursor [Mus musculus]
Length = 1174
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + R+ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSRFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 684 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYILR 964
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 225/629 (35%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSRFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVARLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|348578151|ref|XP_003474847.1| PREDICTED: neurofascin isoform 2 [Cavia porcellus]
Length = 1175
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRPDRPRDL 631
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 632 ELTDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG---VWHDHSKFPGSVNS 684
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 685 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 743
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 744 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI + WN + + ++G+
Sbjct: 797 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQWN--RVYSDTVQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R + R ++ L P + Y ++++ N G+G
Sbjct: 855 LREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTRGVVGRLFPYSNYKLEMVVVNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY +R
Sbjct: 915 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILTGYTLR 965
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 203/560 (36%), Gaps = 87/560 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 527 RLEVKDPTRI-FRMPEDQVVKRGTTVQLE---------CRVKHDPSLRLTVSWLKDDEPL 576
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + P D+P
Sbjct: 577 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLGRP-DRP 628
Query: 288 YQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
++ DL+ ++W +P + N+P Y + + + +FQ +
Sbjct: 629 RDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYIVQFE---EDQFQPGVWHD 674
Query: 343 Y----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P
Sbjct: 675 HSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPS 729
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ G ++Y + ET + + T
Sbjct: 730 DVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRY 783
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+VG P Y ++V A N+ G+GPE + + + P+ P+ V ++ +N T + + W
Sbjct: 784 VVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGLQW 843
Query: 515 RYVSPSFEEEPIIGYKVRVW 534
V + + Y+ W
Sbjct: 844 NRVYSDTVQGQLREYRAYYW 863
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|344277016|ref|XP_003410301.1| PREDICTED: neurofascin-like isoform 2 [Loxodonta africana]
Length = 1174
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 246/536 (45%), Gaps = 49/536 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ L V P+ Q+P + +QL C + L + W + + +GN
Sbjct: 521 AENQVHLEV-KDPTRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKED--------NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
L +R YW+E + + +L TR ++ L P + Y ++++ N G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTR--GVVARLFPYSNYKLEMVVVNGRG 911
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+GP SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 912 DGPRSETKEFTTPEGVPSA-PRRFRVRQPNLQTINLEWDH--PEHPNGILIGYTLK 964
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 133/632 (21%), Positives = 227/632 (35%), Gaps = 105/632 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDKGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P + Q+ E V K T+Q K +W E
Sbjct: 526 HLEVKDPTRI---YQMPEDQVVKRGTTVQLP---------CRVKHDPSLKLTVSWLKDDE 573
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPAD 285
+ Y G + ++ L + E + IA EL + P D
Sbjct: 574 PL-------YVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRP-D 625
Query: 286 KPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 340
+P ++ DL+ ++W +P + N+P Y + + + +FQ
Sbjct: 626 RPRDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVW 671
Query: 341 KEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVA 393
++ G+V AV+++ Y Y+ +V AIN+VG P SE A P+
Sbjct: 672 HDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGA--APESN 726
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V G + +TW P+ G ++Y + ET + + T
Sbjct: 727 PADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRDTWNNVTVWGS 780
Query: 454 ALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + +
Sbjct: 781 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 840
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDADIVDLSPGKRY 567
W V + + Y+ W + S+ +G+ + L P Y
Sbjct: 841 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGVVARLFPYSNY 900
Query: 568 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ ++ + GDG S E KEF +
Sbjct: 901 KLEMVVVNGRGDGPRS---------ETKEFTT 923
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|149058632|gb|EDM09789.1| neurofascin, isoform CRA_e [Rattus norvegicus]
Length = 1174
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 684 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLR 964
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 201/555 (36%), Gaps = 77/555 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V I+ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVW 534
+ + Y+ W
Sbjct: 848 DTVQGQLREYRAYYW 862
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|344277020|ref|XP_003410303.1| PREDICTED: neurofascin-like isoform 4 [Loxodonta africana]
Length = 1169
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 246/536 (45%), Gaps = 49/536 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ L V P+ Q+P + +QL C + L + W + + +GN
Sbjct: 521 AENQVHLEV-KDPTRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKED--------NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
L +R YW+E + + +L TR ++ L P + Y ++++ N G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTR--GVVARLFPYSNYKLEMVVVNGRG 911
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+GP SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 912 DGPRSETKEFTTPEGVPSA-PRRFRVRQPNLQTINLEWDH--PEHPNGILIGYTLK 964
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 133/632 (21%), Positives = 227/632 (35%), Gaps = 105/632 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDKGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P + Q+ E V K T+Q K +W E
Sbjct: 526 HLEVKDPTRI---YQMPEDQVVKRGTTVQLP---------CRVKHDPSLKLTVSWLKDDE 573
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPAD 285
+ Y G + ++ L + E + IA EL + P D
Sbjct: 574 PL-------YVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRP-D 625
Query: 286 KPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 340
+P ++ DL+ ++W +P + N+P Y + + + +FQ
Sbjct: 626 RPRDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVW 671
Query: 341 KEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVA 393
++ G+V AV+++ Y Y+ +V AIN+VG P SE A P+
Sbjct: 672 HDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGA--APESN 726
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V G + +TW P+ G ++Y + ET + + T
Sbjct: 727 PADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRDTWNNVTVWGS 780
Query: 454 ALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + +
Sbjct: 781 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 840
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDADIVDLSPGKRY 567
W V + + Y+ W + S+ +G+ + L P Y
Sbjct: 841 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGVVARLFPYSNY 900
Query: 568 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ ++ + GDG S E KEF +
Sbjct: 901 KLEMVVVNGRGDGPRS---------ETKEFTT 923
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|380798931|gb|AFE71341.1| neuronal cell adhesion molecule isoform A precursor, partial [Macaca
mulatta]
Length = 1278
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 450 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 507
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 508 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 561
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 562 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 619
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 620 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 673
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 674 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 729
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 730 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 786
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 787 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 844
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 845 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 902
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 903 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 959
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 960 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1018
Query: 587 IT 588
+T
Sbjct: 1019 VT 1020
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 349 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 405
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 406 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 463
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 464 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 516
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 517 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 576 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 624
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 625 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 682
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 683 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 739
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 740 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 795
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 796 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 855
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 856 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 913
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 914 SPDRVFNTPE 923
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 259 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 316
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 317 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 373
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 374 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 427
>gi|403257022|ref|XP_003921137.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1192
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 263/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + + N +
Sbjct: 515 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKDNEELPNDE 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + S D+G Y CV +T+ +S + V P
Sbjct: 574 -------RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVTAMNSIGKSLPSEASEQYMTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTQWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 126/616 (20%), Positives = 220/616 (35%), Gaps = 66/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFINVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 524 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPNDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A+N +G P SE ++E P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVTAMNSIGKSLPSEASEQYMTKASE--PDKNPTAVEGLGS 739
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 740 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 795
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 796 VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSI 855
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 856 RGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 915
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 916 GEGP-ASPDRVFNTPE 930
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 266 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + + V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 434
>gi|6651381|gb|AAF22283.1|AF172277_2 NgCAM-related related cell adhesion molecule /alternative carboxyl
terminus [Homo sapiens]
Length = 1236
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 128/617 (20%), Positives = 223/617 (36%), Gaps = 68/617 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P +V+ A +Q + + H ++ T W + + E
Sbjct: 543 KDP------TWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSWT--PGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG 933
Query: 577 GGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 934 KGEGP-ASPDRVFNTPE 949
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|332237972|ref|XP_003268178.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Nomascus
leucogenys]
Length = 1304
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 225/610 (36%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIVKQPEYAVVQRGS-MVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VVADVSDEDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + P P V + +N T V W V + GY
Sbjct: 822 QALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 882 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 939
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 940 SPDRVFNTPE 949
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|402864561|ref|XP_003896528.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Papio anubis]
Length = 1304
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 124/609 (20%), Positives = 223/609 (36%), Gaps = 52/609 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 822 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ W+ R + G+ + L P Y + V + G+G +S
Sbjct: 882 RIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-AS 940
Query: 585 PAITFQMGE 593
P F E
Sbjct: 941 PDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|51095143|gb|EAL24386.1| neuronal cell adhesion molecule [Homo sapiens]
gi|119603835|gb|EAW83429.1| neuronal cell adhesion molecule, isoform CRA_c [Homo sapiens]
Length = 1183
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 264/592 (44%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
L E +D L + + S D+G Y CV +T+ +S + V P P +++
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND+G PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ A+T
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVT 1030
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 129/607 (21%), Positives = 221/607 (36%), Gaps = 58/607 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 534
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 535 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+T K+ + + + + +A L S+ + P P +
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVDVP-----NPPFDLEL 639
Query: 297 GGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ +SW P + N+P I Y+ K Q+E G A ++
Sbjct: 640 TDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---SGTQTTAQLK 694
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ Y+ + V +I P SE ++E P P V G + +TW
Sbjct: 695 LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE--PDKNPTAVEGLGSEPDNLVITWK 752
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV A
Sbjct: 753 PLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQAL 808
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N+ G PE + + P P V + +N T V W V + GY++
Sbjct: 809 NDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIY 868
Query: 533 VWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ Q S+ N I G+ + L P Y + V + G+G +SP
Sbjct: 869 YWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-ASPD 926
Query: 587 ITFQMGE 593
F E
Sbjct: 927 RVFNTPE 933
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|297289128|ref|XP_002803474.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Macaca mulatta]
gi|387539344|gb|AFJ70299.1| neuronal cell adhesion molecule isoform A precursor [Macaca mulatta]
Length = 1304
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 124/609 (20%), Positives = 223/609 (36%), Gaps = 52/609 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 822 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ W+ R + G+ + L P Y + V + G+G +S
Sbjct: 882 RIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-AS 940
Query: 585 PAITFQMGE 593
P F E
Sbjct: 941 PDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|19924211|ref|NP_446361.1| neurofascin isoform 3 precursor [Rattus norvegicus]
gi|16903210|gb|AAL27854.1| neurofascin 155 kDa isoform [Rattus norvegicus]
Length = 1174
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ + L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 684 AVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY +R
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLR 964
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 117/555 (21%), Positives = 202/555 (36%), Gaps = 77/555 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+ + Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V I+ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVW 534
+ + Y+ W
Sbjct: 848 DTVQGQLREYRAYYW 862
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|348526544|ref|XP_003450779.1| PREDICTED: contactin-1a-like [Oreochromis niloticus]
Length = 1042
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 234/491 (47%), Gaps = 18/491 (3%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+ G V I C P AAP+P+F W K ++ + R I +G+L I +++D G+Y+C A
Sbjct: 430 AKDGRVVIECKPRAAPRPRFTWTKGKELLYNSSRISIMFDGSLEILNATKNDEGVYTCFA 489
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G S G L + S P + L+C A + +LD+ +IW +
Sbjct: 490 ENDRGKANSSGYLTITEATS-ITVAPEDTEAKVGDEVILKCEASYDPMLDITFIWAIDFR 548
Query: 123 RIG-NMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N + + E +N DG G L+I NA G Y C ++ V + + V G P
Sbjct: 549 VIDFNSEWQQYER-VMNEDGVGDLKILNAQIWHEGRYTCTAQTVVDSDTAYCDLKVVGVP 607
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEV 237
G PG ++V E+ T + WT GA + PI +Y I R W W N S +
Sbjct: 608 GPPGVIRVEEIGDTWVKLWWTKGAEHNSPILYYTIQTRHYWALYEDDWRNASTSPTVLD- 666
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E + L PW Y+F++IA NE G GE S PS + T P +P+ + G
Sbjct: 667 ----GSMERAEVTDLYPWMEYQFRIIATNEYGSGEASIPSLKIKTWDAPPVVSPTNLAGY 722
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE---YGNVGIAVVRIP 354
GG+ G++ I+W P+ Y + ++ + ++ ET+ + +V IP
Sbjct: 723 GGRNGEIIITWTPVEPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRHVHRDTYFIP 782
Query: 355 SE--FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+E F E++VK+++ N G GP + I+ D+P +P +++R +ST V W
Sbjct: 783 TEEDFQVREFQVKIKSFNVKGDGPYTLTKVIYYPRDVPIESPTDIYARPVSSTEALVWWL 842
Query: 413 PIELIRENIRGRLIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ ++ + G++++YW++ D+PE A + N + + PD+ Y ++V A
Sbjct: 843 PVVDTGTGLQQYIEGYQVRYWRKYDDPEPGANRIFVSASVNQTRLENMLPDSHYLIEVRA 902
Query: 472 YNNAGEGPESE 482
YN AG GP E
Sbjct: 903 YNGAGLGPPGE 913
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 126/601 (20%), Positives = 221/601 (36%), Gaps = 64/601 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T+ C P P W KDG + G G L S ++ DSG+Y C A N
Sbjct: 348 GSEHTMRCVASGKPFPFIRWYKDGYMYG---------KGELKFSSLTFADSGMYQCIAEN 398
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G+ + L V+ +E P K + ++ ++ + WT
Sbjct: 399 YWGIKYANAELRVIACAPTFEFNPVKKQLLGAKDGRVVIECKPRAAPRPRFTWTK----- 453
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-------TKTTVIVE 177
G L +I DG L EI NA+ D G Y C ++ GK + T+ T I
Sbjct: 454 GKELLYNSSRISIMFDGSL-EILNATKNDEGVYTCFAENDRGKANSSGYLTITEATSITV 512
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P V + K A+ P+ I ++ FN SE + V
Sbjct: 513 APEDTEAKVGDEVILKCEASYD---------PMLDITFIWAIDFRVIDFN-SEWQQYERV 562
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G + I N + W + A + + + R+
Sbjct: 563 MNEDGVGDLKILNAQI-WHEGRYTCTAQTVV---DSDTAYCDLKVVGVPGPPGVIRVE-- 616
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKI----FWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+IGD + + N+P +YY I +W D + T + + +
Sbjct: 617 --EIGDTWVKLWWTKGAEHNSPILYYTIQTRHYWALYEDDWRNASTSPTVLDGSMERAEV 674
Query: 354 PSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ + EY+ ++ A N+ G G S + I + + P V+P + G + I +TW
Sbjct: 675 TDLYPWMEYQFRIIATNEYGSGEASIPSLKIKTWDAPPVVSPTNLAGYGGRNGEIIITWT 734
Query: 413 PIELIRENIRGRLIGHRIKY--------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
P+E G+ G+ + + W E + ++ R T + + D +
Sbjct: 735 PVEPWY--FYGKKFGYIVAFKPHDAYDWWYETISDPETRRHVHRDT----YFIPTEEDFQ 788
Query: 465 ---YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV--SP 519
+ VK+ ++N G+GP + + R P + P+ ++ + ++ T V W V +
Sbjct: 789 VREFQVKIKSFNVKGDGPYTLTKVIYYPRDVPIESPTDIYARPVSSTEALVWWLPVVDTG 848
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ ++ I GY+VR W D + I + + ++ P Y + V A++ G
Sbjct: 849 TGLQQYIEGYQVRYWRKYDDPEPGANRIFVSASVNQTRLENMLPDSHYLIEVRAYNGAGL 908
Query: 580 G 580
G
Sbjct: 909 G 909
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 20/163 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTAT 63
N+T+ C P P VW+K + +I E+G +L + V +D G Y C A
Sbjct: 258 ASNITLECFALGNPIPHIVWRK-VDATDLPANHEISESGAVLHLFNVQYEDVGFYECEAI 316
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G D K L V P + E + + + +RC A + + W +G
Sbjct: 317 NTKGKDWHKAWLYVESAPEWAETINNTMKDIGSEH-TMRCVASGKPFPFIR--WYKDGYM 373
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
G G L+ ++ +FAD+G Y+C+ ++ G
Sbjct: 374 YGK---------------GELKFSSLTFADSGMYQCIAENYWG 401
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 10/182 (5%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCT 61
G +++ C A P + W++D ++ GNL+I+ P+ + +G Y C
Sbjct: 56 GRISMNCRARANPPATYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPIQKKHAGTYVCV 115
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N++G SK R+ + ++ + + + L C +V Y W +N
Sbjct: 116 AKNIYGTVISKEARVKFGFLGEFPDEERDPVYVKEGQGAVLLCVPPKAWPQEVTYRWIYN 175
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV-GK-ISTKTTVIVEG 178
+ LN ++ G L I DAG Y C V S V GK + +K ++
Sbjct: 176 EFPVF---LNTDRRRFVSQKTGNLYIAKVEAQDAGNYSCFVSSPVLGKSVFSKFIPLIPL 232
Query: 179 PP 180
PP
Sbjct: 233 PP 234
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 24/196 (12%)
Query: 1 YAGEGGNVTIFC-NPEAAPKP---KFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDS 55
Y EG + C P+A P+ ++++ + + + RR + + GNL I+ V D+
Sbjct: 147 YVKEGQGAVLLCVPPKAWPQEVTYRWIYNEFPVFLNTDRRRFVSQKTGNLYIAKVEAQDA 206
Query: 56 GIYSCTATNVHGMDESKGRLIVL-----------HGPSYYEQLPPKITIAAHRNLQLRCS 104
G YSC ++ + I L P+ P T N+ L C
Sbjct: 207 GNYSCFVSSPVLGKSVFSKFIPLIPLPPDDGEERKYPADIRVKFPDTTAMLASNITLECF 266
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 164
A + + + V ++ N I+ G +L + N + D G YEC +T
Sbjct: 267 ALGNPIPHIVW----RKVDATDLPANH----EISESGAVLHLFNVQYEDVGFYECEAINT 318
Query: 165 VGKISTKTTVIVEGPP 180
GK K + VE P
Sbjct: 319 KGKDWHKAWLYVESAP 334
>gi|332237970|ref|XP_003268177.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Nomascus
leucogenys]
Length = 1211
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 225/610 (36%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIVKQPEYAVVQRGS-MVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VVADVSDEDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + P P V + +N T V W V + GY
Sbjct: 822 QALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 882 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 939
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 940 SPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|410908413|ref|XP_003967685.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
Length = 1288
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 261/591 (44%), Gaps = 45/591 (7%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGM 68
I C +P P+ W K+ + I NG L + +SG Y+C A N G+
Sbjct: 458 IDCASFGSPVPQITWFKESRSSTMDSQAYITHTNGTLEMRTAQAHNSGKYTCVARNSLGI 517
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
E+ L V P+ + P + R++ C + L W + G +
Sbjct: 518 YENHVYLQVKE-PTRILKQPEYKVVQRGRSVVFECKVKHDPTLTPTITWLKDD---GELP 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+E + ++ L IT+ S +DAG Y CV +T+ + S + V P P +++
Sbjct: 574 DDE----RLILESDSLTITDVSESDAGVYTCVTNTTLDQDSASAELTVVERPDPPTDLEL 629
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
+ K S + WT G + PI + + + + W N++E V G + +
Sbjct: 630 TDKKKRSVQLTWTPGDEHNSPIQKFLVQYEDSLHHHGHWHNLTE-VPGTKTTTHLK---- 684
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
L P+ Y F+V+A N++G+ PS PS T A P Q P+ + G G + +L I
Sbjct: 685 -----LSPYVHYTFRVLALNDVGFSRPSFPSRMLKTEAAAPDQNPAGVQGFGTEHDNLVI 739
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
SW+PL + N P ++Y++ WR+K+ D+E+ S T+ N V P+ + YE+K
Sbjct: 740 SWKPLSGLQANGPGLHYRVMWRQKDLDSEWTSVTVA--NNSKFVVSGTPT---FAPYELK 794
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND G GPE V FS ED+P AP V S NST + W+P+ +RG L
Sbjct: 795 VQAVNDYGAGPEPAVALGFSGEDLPLAAPDNVQSMVLNSTVAEIHWDPVP--SRLLRGHL 852
Query: 426 IGHRIKYWKEDNPEETAVYYLSRTTRNWA------LIVGLQPDTKYYVKVMAYNNAGEGP 479
G ++ YW+E + ++ + N++ ++ GL P + Y V YN GEGP
Sbjct: 853 KGFKVYYWRERSLHRHNGHHTEKHILNFSGNHTRGVLPGLHPFSLYLFNVRVYNGRGEGP 912
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S T P P S + + +N ++ + W P I GY + V+
Sbjct: 913 PSATQQFETPEGVPGAPTSLI-VSRVNLDSLTLEWN--PPHVHNGHITGYTLEYQPVNSS 969
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
++ +P T V LS +Y R + N R + PA+T
Sbjct: 970 NELGPKEKLALPANET----SVTLS-NLKYSTRYKFYLNAKTVRGAGPAVT 1015
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 10/208 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C E P P+ W K + + + L I VS D+G Y C A N
Sbjct: 268 GQVLEMECIAEGLPTPEISWTKVSGDLPAKRTSFLHYQKTLRIVDVSESDAGEYCCVARN 327
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + ++V P + + +A + L C A ++ W NG+ I
Sbjct: 328 QLGSVQQTIHVMVKAAPYWISGPSKNLVLAPGESGVLTCRASGTPKPSIS--WAMNGISI 385
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPPGL 182
N + P+ ++ + + + Y+C V + G + + V+ E P L
Sbjct: 386 ENAPAD----PSRKVEDDTIIFADVQSGSSAVYQCNVSNDYGYLLSNAFVNVLSEPPRVL 441
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPI 210
+V +V K + D A+ G P+
Sbjct: 442 TPANKVYQVIKNQRAL--IDCASFGSPV 467
>gi|402864553|ref|XP_003896524.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Papio anubis]
Length = 1180
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 803 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 863 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 920
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 921 SPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|6651380|gb|AAF22282.1|AF172277_1 NgCAM-related related cell adhesion molecule [Homo sapiens]
Length = 1308
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 543 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 932
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 933 GKGEGP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|402864557|ref|XP_003896526.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Papio anubis]
Length = 1192
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 803 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 863 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 920
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 921 SPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|402864559|ref|XP_003896527.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Papio anubis]
Length = 1211
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 822 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVRWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 882 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 939
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 940 SPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|340714433|ref|XP_003395733.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Bombus terrestris]
Length = 1251
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/588 (28%), Positives = 271/588 (46%), Gaps = 38/588 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W ++G + +GGR K ++G+L I V D+G Y+C A+
Sbjct: 439 DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E+ G L V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D G Y CV + + + + T++V+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V V ++ATI WT N PI Y I T++ + +S+ +
Sbjct: 613 KLVSV-NCAGSTATIHWTPMGDNRAPILRYTIQHNTSFTPDTWEISKDPVPS-------- 663
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E + + + PW+ Y F+V+A N++G PS S T D P+ P + G G +
Sbjct: 664 TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQN 723
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW +P+ + NAP Y++++R+ E + E + ++ + V P+ Y Y
Sbjct: 724 LVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHDWKKNNLVVDNQPT---YQRY 780
Query: 363 EVKVQAINDVGP---GPESEVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIR 418
++KV AIN+ G PE VT +S ED+P AP ++ +ST+ +WNP+
Sbjct: 781 KIKVVAINERGECRIAPEE--VTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVP--E 836
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
E++RG L G++I+ W E + E+ R R AL+ P K YV+++AYN
Sbjct: 837 ESVRGELQGYKIQTWTEKDGEKGMREIDIRGGNRTHALVTKFVPFNKNYVRILAYNGRYA 896
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP SE ++ P + ++++ + + + P+ + GY++ V+
Sbjct: 897 GPPSETL---SFDTPEGVPGTVLNLEAFPMGSSALFLAWTKPAEPNGILTGYRIYYESVN 953
Query: 538 QD-----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ R I P + A + L+P +Y + V A + G+G
Sbjct: 954 GTRLGPLLERKPHIIDPEATS--AKLAALAPDTKYRVHVRATTKVGEG 999
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGKKXELYCIHGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNSKDEGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ +C+A+ + ++ W HN
Sbjct: 312 EASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
>gi|332811716|ref|XP_003308756.1| PREDICTED: neurofascin isoform 2 [Pan troglodytes]
Length = 1276
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 565 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 622
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 623 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 681
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 682 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 732
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 733 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 785
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 786 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 844
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 845 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 897
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 898 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 955
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 956 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGMVSRLFPYSNYKLEMVVVNGRGDG 1015
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 1016 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1066
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 464 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 521
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 522 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 572
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 573 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 627
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 628 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 677
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 678 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 726
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 727 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 780
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 781 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 835
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 836 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 889
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 890 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 949
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 950 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGMVSRLFPYSNYKLE 1005
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 1006 MVVVNGRGDGPRS---------ETKEFTT 1025
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 182 L 182
+
Sbjct: 545 M 545
>gi|332237964|ref|XP_003268174.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Nomascus
leucogenys]
Length = 1180
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 225/610 (36%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIVKQPEYAVVQRGS-MVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VVADVSDEDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + P P V + +N T V W V + GY
Sbjct: 803 QALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 863 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 920
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 921 SPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|81158226|ref|NP_001032209.1| neuronal cell adhesion molecule isoform A precursor [Homo sapiens]
gi|215274127|sp|Q92823.3|NRCAM_HUMAN RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM; AltName:
Full=Neuronal surface protein Bravo; Short=hBravo;
AltName: Full=NgCAM-related cell adhesion molecule;
Short=Ng-CAM-related; Flags: Precursor
Length = 1304
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 543 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 932
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 933 GKGEGP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|397479949|ref|XP_003811262.1| PREDICTED: neuronal cell adhesion molecule [Pan paniscus]
Length = 1304
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 125/614 (20%), Positives = 223/614 (36%), Gaps = 62/614 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 543 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP 760
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 761 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 816
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 817 YLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 876
Query: 525 PIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ GY++ W+ R + G+ + L P Y + V + G+
Sbjct: 877 HLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGE 936
Query: 580 GRMSSPAITFQMGE 593
G +SP F E
Sbjct: 937 GP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|350588948|ref|XP_003482751.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Sus scrofa]
Length = 1183
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 262/593 (44%), Gaps = 48/593 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPSIEWFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------D 578
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
+EL + +D L + + + D G Y CV +T+ +S + V P P ++
Sbjct: 579 HSELPSDGRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLE 638
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKE 245
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 639 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT-------- 689
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 690 -TAQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 748
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y V
Sbjct: 749 ITWKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLV 803
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KVQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG
Sbjct: 804 KVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVPL--KSIRGH 861
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L G+RI YWK + ++ + ++ ++ GL+P + Y + V N GEG
Sbjct: 862 LQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG 921
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD- 537
P S T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 922 PASPDRAFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINS 978
Query: 538 -QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A + G G +++ A+T
Sbjct: 979 THELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEEAVT 1030
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 26/187 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LD A+ +
Sbjct: 426 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIADRPAFLDCAFFGSP 476
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E I + G LEI A G Y CV ++ +G +
Sbjct: 477 LPSIEWFKGAKGSALR----EDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 532
Query: 173 TVIVEGP 179
+ ++ P
Sbjct: 533 HLEIKDP 539
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVTEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NTLGAIHHTISVTVKAAP-YWIIAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|380798909|gb|AFE71330.1| neuronal cell adhesion molecule isoform E precursor, partial [Macaca
mulatta]
Length = 1166
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 431 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 488
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 489 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 542
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 543 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 600
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 601 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 654
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 655 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 710
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 711 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 767
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 768 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 825
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 826 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 883
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 884 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 940
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 941 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 999
Query: 587 IT 588
+T
Sbjct: 1000 VT 1001
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 330 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 386
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 387 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 444
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 445 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 497
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 498 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 556
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 557 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 605
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 606 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 663
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 664 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 720
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 721 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 776
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 777 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 836
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 837 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 894
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 895 SPDRVFNTPE 904
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 240 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 297
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 298 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 354
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 355 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 408
>gi|297289130|ref|XP_002803475.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Macaca mulatta]
gi|387539346|gb|AFJ70300.1| neuronal cell adhesion molecule isoform D precursor [Macaca mulatta]
Length = 1211
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 822 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 881
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 882 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 939
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 940 SPDRVFNTPE 949
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|387539342|gb|AFJ70298.1| neuronal cell adhesion molecule isoform E precursor [Macaca mulatta]
Length = 1192
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 124/609 (20%), Positives = 223/609 (36%), Gaps = 52/609 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 803 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ W+ R + G+ + L P Y + V + G+G +S
Sbjct: 863 RIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-AS 921
Query: 585 PAITFQMGE 593
P F E
Sbjct: 922 PDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|332237966|ref|XP_003268175.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Nomascus
leucogenys]
Length = 1192
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDRDHLVVADVSDEDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 225/610 (36%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIVKQPEYAVVQRGS-MVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDRDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VVADVSDEDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNGIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + P P V + +N T V W V + GY
Sbjct: 803 QALNDMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 863 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 920
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 921 SPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIVHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|380798907|gb|AFE71329.1| neuronal cell adhesion molecule isoform D precursor, partial [Macaca
mulatta]
Length = 1185
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 450 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 507
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 508 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 561
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 562 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 619
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 620 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 673
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 674 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 729
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 730 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 786
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 787 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 844
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 845 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 902
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 903 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILTEY 959
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 960 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1018
Query: 587 IT 588
+T
Sbjct: 1019 VT 1020
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 127/610 (20%), Positives = 226/610 (37%), Gaps = 54/610 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 349 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 405
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 406 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 463
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 464 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 516
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 517 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 576 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 624
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 625 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 682
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 683 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 739
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 740 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 795
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 796 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 855
Query: 530 KVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++ W+ Q S+ N I G+ + L P Y + V + G+G +
Sbjct: 856 RIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-A 913
Query: 584 SPAITFQMGE 593
SP F E
Sbjct: 914 SPDRVFNTPE 923
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 259 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 316
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 317 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 373
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 374 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 427
>gi|332811714|ref|XP_514129.3| PREDICTED: neurofascin isoform 3 [Pan troglodytes]
Length = 1271
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 565 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 622
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 623 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 681
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 682 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 732
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 733 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 785
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 786 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 844
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 845 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 897
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 898 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 955
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 956 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGMVSRLFPYSNYKLEMVVVNGRGDG 1015
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 1016 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1066
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 129/610 (21%), Positives = 221/610 (36%), Gaps = 90/610 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 464 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 521
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 522 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 572
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 573 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 627
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 628 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 677
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 678 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA----YLTVLGRP 726
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 727 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 780
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 781 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 835
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 836 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 889
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 890 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 949
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 950 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGMVSRLFPYSNYKLE 1005
Query: 571 VLAFSNGGDG 580
++ + GDG
Sbjct: 1006 MVVVNGRGDG 1015
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 182 L 182
+
Sbjct: 545 M 545
>gi|302191649|ref|NP_001180512.1| neuronal cell adhesion molecule isoform E precursor [Homo sapiens]
Length = 1192
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 524 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 681
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 682 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 913
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 914 GKGEGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|383863731|ref|XP_003707333.1| PREDICTED: neuroglian-like [Megachile rotundata]
Length = 1251
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 234/483 (48%), Gaps = 24/483 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W + G + +GGR K ++G+L I V D+G+Y+C A+
Sbjct: 439 DGKTVRITCRVFGAPKPAVKWIRKGQEL-TGGRYKTLDSGDLEIENVIFLDAGVYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E+ G L+V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEVEATGNLVVKEHTRITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGKP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D+G Y CV ++ + + + T+IV+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDSGTYTCVARTELDETKAQATLIVQDVPN-P 611
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ V+ + A++ WT N I Y I T + + +S+ + Y
Sbjct: 612 PKLLSVKCMENEASVHWTPMGDNRASILRYTIQYNTTFTPDTWEISKDAVPATEQTYVVP 671
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ PW+ Y F+V+A N++G PS S T D PY+ P + G G +
Sbjct: 672 --------MSPWANYTFRVLAWNKIGPSLPSPHSDVCTTLPDVPYKNPDNVAGKGTTPQN 723
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW +P+ + NAP Y++++R+ E + E ++++ + V P+ Y Y
Sbjct: 724 LVISWTAMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIQDWKKNSLVVDNQPT---YQRY 780
Query: 363 EVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
++KV AIN G + E VT +S ED+P AP ++ +ST+ +WNP+ E+
Sbjct: 781 KIKVVAINARGECRVAPEEVTGYSGEDVPLQAPTNFTLNQIKSSTSAQFSWNPVP--EES 838
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG L G++I+ W E + E+ R R+ AL+ P +K YV+++AYN GP
Sbjct: 839 VRGELQGYKIQTWTEKDGEKGLREIDIRGGNRSHALVTKFVPFSKNYVRILAYNGRYAGP 898
Query: 480 ESE 482
SE
Sbjct: 899 PSE 901
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + ++C P P+ VW K+G I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGNKIELYCIYGGTPLPQIVWSKNGQPIKTNDRITQGNYGKSLIIKHVNFKDEGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + ++ P I A ++ +C+A ++ W HN
Sbjct: 312 EASNGVGDAKSNSINLQVMAVPFFTIEPEIINAAEDETVEFKCAASGVPTPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTANSIIIEKLTKKDTGNYGCNATNSLGYV 413
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 26/264 (9%)
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ Y +V A N +GP P S+V T D+P P V +G + ++W +
Sbjct: 675 WANYTFRVLAWNKIGPSLPSPHSDVCTTLP--DVPYKNPDNVAGKGTTPQNLVISWTAMP 732
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNN 474
I N + +R+ Y++ D P E + + +L+V QP +Y +KV+A N
Sbjct: 733 QIEHNAPKFM--YRV-YYRRDIPGEKWTIEDIQDWKKNSLVVDNQPTYQRYKIKVVAINA 789
Query: 475 AGEGPES-ERYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSPSFEEEPIIGYKVR 532
GE + E + P + P+ + I + T+ +W V + GYK++
Sbjct: 790 RGECRVAPEEVTGYSGEDVPLQAPTNFTLNQIKSSTSAQFSWNPVPEESVRGELQGYKIQ 849
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP---AITF 589
W + I GN A + P + ++R+LA+ +GR + P ++F
Sbjct: 850 TWTEKDGEKGLREIDIRGGNRSHALVTKFVPFSKNYVRILAY----NGRYAGPPSETLSF 905
Query: 590 QMGEE--------KEFKSGSPALY 605
E + F GS AL+
Sbjct: 906 DTPEGVPGTVLSLEAFPMGSSALF 929
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG-DLSISWEPLPR 313
+ Y+ KV+A N G + + D P QAP+ K SW P+P
Sbjct: 777 YQRYKIKVVAINARGECRVAPEEVTGYSGEDVPLQAPTNFTLNQIKSSTSAQFSWNPVPE 836
Query: 314 EKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAIND 371
E YKI W +K+ + E GN A+V ++F +++ V++ A N
Sbjct: 837 ESVRGELQGYKIQTWTEKDGEKGLREIDIRGGNRSHALV---TKFVPFSKNYVRILAYNG 893
Query: 372 VGPGPESEVVTIFSAEDMP-QVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHR 429
GP SE ++ + E +P V F G S+A+ + W P E G L G+R
Sbjct: 894 RYAGPPSETLSFDTPEGVPGTVLSLEAFPMG--SSALFLVWTKPAEP-----NGNLTGYR 946
Query: 430 IKYWKEDN----PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYL 485
I Y + P +++ A + L PDTKY V + A G+G ++ ++
Sbjct: 947 IYYELVNGTTLGPLLERKPHITDPEATSAKLAALAPDTKYRVHIRATTKVGQG--NDYFI 1004
Query: 486 ERTYRKAPQKP 496
E+ R + Q+P
Sbjct: 1005 EQKTRTS-QRP 1014
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 75/187 (40%), Gaps = 30/187 (16%)
Query: 2 AGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDS 55
A EG + C P + PKP W NI GS R + GNL S V+R D+
Sbjct: 140 ANEGQPFKLTCQPPDGWPKPNVYWMIQ-NIAGSIKSINNSRMTLDPEGNLWFSNVTRYDA 198
Query: 56 G---IYSCTATNVHGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAH 106
Y+C AT+++ + G ++LH S + P K ++ + LR +
Sbjct: 199 SDDFYYACAATSLYRNEYKIGNRVLLHVISSGTSASQNKHEPVKQYVSRKNEVALR--GN 256
Query: 107 TEELLDV-------AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
EL + +W+ NG I D + N G L I + +F D G Y C
Sbjct: 257 KIELYCIYGGTPLPQIVWSKNGQPIKTND--RITQGNY---GKSLIIKHVNFKDEGTYTC 311
Query: 160 VVKSTVG 166
+ VG
Sbjct: 312 EASNGVG 318
>gi|350399162|ref|XP_003485438.1| PREDICTED: neuroglian-like isoform 1 [Bombus impatiens]
Length = 1251
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 270/586 (46%), Gaps = 34/586 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W ++G + +GGR K ++G+L I V D+G Y+C A+
Sbjct: 439 DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E+ G L V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D G Y CV + + + + T++V+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V V T+ATI WT N PI Y I T++ + +S+ +
Sbjct: 613 KLVSV-NCAGTTATIHWTPMGDNRAPILRYTIQHNTSFTPDTWEISKDPVPS-------- 663
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E + + + PW+ Y F+V+A N++G PS S T D P+ P + G G +
Sbjct: 664 TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQN 723
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW +P+ + NAP Y++++R+ E + E + ++ + V P+ Y Y
Sbjct: 724 LVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHDWKKNSLVVDNQPT---YQRY 780
Query: 363 EVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
++KV AIN+ G + E VT +S ED+P AP ++ +ST+ +WNP+ E+
Sbjct: 781 KIKVVAINERGECRVAPEEVTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVP--EES 838
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG L G++I+ W E + E+ R R AL+ P K YV+++AYN GP
Sbjct: 839 VRGELQGYKIQTWTEKDGEKGMREIDIRGGNRTHALVTKFVPFNKNYVRILAYNGRYAGP 898
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
SE ++ P + ++++ + + + P+ + GY++ V+
Sbjct: 899 PSETL---SFDTPEGVPGTVLNLEAFPMGSSALFLAWTKPAEPNGILTGYRIYYESVNGT 955
Query: 540 -----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ R P + A + L+P +Y + V A + G+G
Sbjct: 956 RLGPLLERKPHITDPEATS--AKLAALAPDMKYRVHVRATTKVGEG 999
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGKKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ +C+A+ + ++ W HN
Sbjct: 312 EASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
>gi|77681487|ref|NP_001029334.1| neuronal cell adhesion molecule precursor [Pan troglodytes]
gi|56122350|gb|AAV74326.1| neuronal cell adhesion protein [Pan troglodytes]
Length = 1180
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 226/615 (36%), Gaps = 64/615 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 524 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP 741
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 742 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 797
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 798 YLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 857
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ Q S+ N I G+ + L P Y + V + G
Sbjct: 858 HLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 916
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 917 EGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|302191651|ref|NP_001180513.1| neuronal cell adhesion molecule isoform F precursor [Homo sapiens]
Length = 1180
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 524 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 681
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 682 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 913
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 914 GKGEGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|426333442|ref|XP_004028286.1| PREDICTED: neurofascin isoform 3 [Gorilla gorilla gorilla]
Length = 1276
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 565 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 622
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 623 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 681
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 682 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 732
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 733 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 785
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 786 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 844
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 845 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 897
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 898 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 955
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 956 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 1015
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 1016 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1066
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 464 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 521
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 522 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 572
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 573 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 627
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 628 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 677
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 678 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 726
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 727 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 780
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 781 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 835
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 836 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 889
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 890 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 949
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 950 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 1005
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 1006 MVVVNGRGDGPRS---------ETKEFTT 1025
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 182 L 182
+
Sbjct: 545 M 545
>gi|350399166|ref|XP_003485439.1| PREDICTED: neuroglian-like isoform 2 [Bombus impatiens]
Length = 1247
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/586 (28%), Positives = 270/586 (46%), Gaps = 34/586 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W ++G + +GGR K ++G+L I V D+G Y+C A+
Sbjct: 439 DGKIVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSGDLEIENVIFLDAGTYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E+ G L V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEIEASGNLAVKEHTRITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D G Y CV + + + + T++V+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDTGTYTCVAHTELDEAKAQATLVVQDVPNPP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V V T+ATI WT N PI Y I T++ + +S+ +
Sbjct: 613 KLVSV-NCAGTTATIHWTPMGDNRAPILRYTIQHNTSFTPDTWEISKDPVPS-------- 663
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E + + + PW+ Y F+V+A N++G PS S T D P+ P + G G +
Sbjct: 664 TEQTYDVPMSPWANYTFRVLAWNKIGPSLPSPHSDVCTTLQDVPFTNPDNVMGKGTTPQN 723
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW +P+ + NAP Y++++R+ E + E + ++ + V P+ Y Y
Sbjct: 724 LVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDIHDWKKNSLVVDNQPT---YQRY 780
Query: 363 EVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
++KV AIN+ G + E VT +S ED+P AP ++ +ST+ +WNP+ E+
Sbjct: 781 KIKVVAINERGECRVAPEEVTGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNPVP--EES 838
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG L G++I+ W E + E+ R R AL+ P K YV+++AYN GP
Sbjct: 839 VRGELQGYKIQTWTEKDGEKGMREIDIRGGNRTHALVTKFVPFNKNYVRILAYNGRYAGP 898
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
SE ++ P + ++++ + + + P+ + GY++ V+
Sbjct: 899 PSETL---SFDTPEGVPGTVLNLEAFPMGSSALFLAWTKPAEPNGILTGYRIYYESVNGT 955
Query: 540 -----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ R P + A + L+P +Y + V A + G+G
Sbjct: 956 RLGPLLERKPHITDPEATS--AKLAALAPDMKYRVHVRATTKVGEG 999
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGKKIELYCIHGGTPLPQIVWSKNGEVIKTNDRIMQGNYGKSLIIKHVNSKDEGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ +C+A+ + ++ W HN
Sbjct: 312 EASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETVEFKCAANGVPVPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D G Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTPNSIIIEKLTKKDTGNYGCNATNSLGYV 413
>gi|426357543|ref|XP_004046097.1| PREDICTED: neuronal cell adhesion molecule-like [Gorilla gorilla
gorilla]
Length = 1103
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTVEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLTLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 125/609 (20%), Positives = 223/609 (36%), Gaps = 52/609 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L V +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTVEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 524 KDPTWIVKQPEYAVVQRGS-MVSFECKVKHDHTLTLTVLWLKDNRELPSDERFTVDKDHL 582
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 583 VVADVSDDDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 631
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 632 FDLELTDQLDKSVQLSWT--PGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGTQTTAQ 689
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 690 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 746
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 747 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 802
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 803 QALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 862
Query: 530 KVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ W+ R + G+ + L P Y + V + G+G +S
Sbjct: 863 RIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP-AS 921
Query: 585 PAITFQMGE 593
P F E
Sbjct: 922 PDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|390477460|ref|XP_002760748.2| PREDICTED: neurofascin isoform 3 [Callithrix jacchus]
Length = 1169
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAIN+ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVVNSTAINLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P ++GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMLGYTLK 964
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 135/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T +++ W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVVNSTAINLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|348568085|ref|XP_003469829.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Cavia
porcellus]
Length = 1183
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/521 (28%), Positives = 234/521 (44%), Gaps = 42/521 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+D L +T+ +D G Y CV +T+ ++S + V P P +++
Sbjct: 587 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVDVPSPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+N +G PE VVT S ED+P VAP V NST V W+P+ L ++IRGRL
Sbjct: 805 VQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGRL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + +L + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
S T P P S +K +NPT +T + PS
Sbjct: 923 ASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPS 960
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 126/621 (20%), Positives = 225/621 (36%), Gaps = 86/621 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 426 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 479
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + E + + G LEI A ++G Y CV ++ +G +
Sbjct: 480 IEWFKGAKGSALH-------EDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 532
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 533 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 585
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
F V +H++ +V G + N + +V A L + PSP ++
Sbjct: 586 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVD--VPSPPFDL 637
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLK 341
+ +SW P + N+P + I + ++ +
Sbjct: 638 ELTDQLDK------------SVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE 683
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
G A +++ Y+ +V A N +G P SE +AE P P V
Sbjct: 684 VSGTQTTAQLKLSPYVNYS---FRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAVE 738
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 GLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 794
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y +KV A N G PE + P P V + +N T V W V
Sbjct: 795 TPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 854
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 855 LKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNVR 913
Query: 573 AFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 914 VVNGKGEGP-ASPDRAFSTPE 933
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 394
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 395 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 426
>gi|237858679|ref|NP_001153804.1| neurofascin isoform 3 precursor [Homo sapiens]
Length = 1174
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 964
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 526 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---EDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|54633206|dbj|BAD66839.1| KIAA0756 splice variant 1 [Homo sapiens]
Length = 836
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 260 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 317
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 318 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 376
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 377 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 427
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 428 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 480
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 481 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 539
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 540 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 592
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 593 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 650
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 651 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 710
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 711 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 761
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 159 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 216
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 217 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 267
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 268 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 322
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 323 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 372
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 373 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 421
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 422 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 475
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 476 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 530
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 531 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 584
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 585 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 644
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 645 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 700
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 701 MVVVNGRGDGPRS---------ETKEFTT 720
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 69 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 126
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 127 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 183
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 184 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 239
Query: 182 L 182
+
Sbjct: 240 M 240
>gi|89903008|ref|NP_055905.2| neurofascin isoform 4 precursor [Homo sapiens]
gi|168273078|dbj|BAG10378.1| neurofascin precursor [synthetic construct]
gi|187952493|gb|AAI37014.1| Neurofascin homolog (chicken) [Homo sapiens]
Length = 1169
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 964
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 526 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---EDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|426333440|ref|XP_004028285.1| PREDICTED: neurofascin isoform 2 [Gorilla gorilla gorilla]
Length = 1271
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 565 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 622
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 623 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 681
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 682 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 732
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 733 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 785
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 786 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 844
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 845 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 897
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 898 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 955
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 956 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 1015
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 1016 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1066
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 129/610 (21%), Positives = 221/610 (36%), Gaps = 90/610 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 464 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 521
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 522 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 572
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 573 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 627
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 628 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 677
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 678 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 726
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 727 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 780
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 781 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 835
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 836 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 889
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 890 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 949
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 950 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 1005
Query: 571 VLAFSNGGDG 580
++ + GDG
Sbjct: 1006 MVVVNGRGDG 1015
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 374 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 431
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 432 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 488
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 489 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 544
Query: 182 L 182
+
Sbjct: 545 M 545
>gi|410952030|ref|XP_003982692.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Felis catus]
Length = 1181
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 263/604 (43%), Gaps = 59/604 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D LE+ + +D G Y CV +T+ +S + V P
Sbjct: 566 NGELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 626 DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----- 680
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS PS QY T A +P P+ +
Sbjct: 681 -----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWK------EDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYV 467
L ++IRG L G+RI YWK + N L+ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYAL 908
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 909 NVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILT 965
Query: 528 GYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSS 584
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 EYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITE 1024
Query: 585 PAIT 588
A+T
Sbjct: 1025 EAVT 1028
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 131/616 (21%), Positives = 232/616 (37%), Gaps = 65/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G ++ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--SLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 463
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + G+ +++ + N G LEI A G Y CV ++ +G +
Sbjct: 464 LPTIEWFKGAK-GSALRDDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS 229
+ ++ P + + V + S T+ + + +T + N + F V
Sbjct: 520 HLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTVD 578
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKP 287
+H+ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 579 KDHLEVADVRDSDGGAYTCVANTTLDM------VSASAVLSVVAPTPTPAPIYDVP---- 628
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 346
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 -NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQ 685
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 686 TTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAE--PDTNPTAVEGLGSE 740
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ +TW P+ N G + +++ + ++D +E A ++ ++ ++ G
Sbjct: 741 PDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWASVVVANVSK--YIVSGTPTFV 796
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 797 PYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR 856
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ + + N I G+ + L P Y + V +
Sbjct: 857 GHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGK 916
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 917 GEGP-ASPDRVFNTPE 931
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTFYRNFKK-TLQIIQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NALGAIHHTISVTVKAAP-YWILAPQNLVLSPGEDGSLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|302191647|ref|NP_001180511.1| neuronal cell adhesion molecule isoform D precursor [Homo sapiens]
Length = 1211
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 543 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 932
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 933 GKGEGP-ASPDRVFNTPE 949
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|297483860|ref|XP_002693952.1| PREDICTED: neurofascin isoform 2 [Bos taurus]
gi|296479434|tpg|DAA21549.1| TPA: neurofascin homolog (chicken) isoform 2 [Bos taurus]
Length = 1173
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 462 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 519
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L +A W + + I N
Sbjct: 520 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISN 578
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 579 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 629
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 630 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 682
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I
Sbjct: 683 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEI 741
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 742 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 794
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 795 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYSDTVQGQ 852
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 853 LREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 912
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 913 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 963
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 225/629 (35%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 361 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 418
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 419 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 469
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 470 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 524
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 525 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLAVSWLKDDEPL 574
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y + E+ L + E + +A EL + Y T +P
Sbjct: 575 -------YISNRMKKEEDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 623
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 624 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 677
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 678 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPSDVKGE 732
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 733 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 786
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 787 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYS 846
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A P G+ L + L P Y +
Sbjct: 847 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAG---FP-GDRLRGVVSRLFPYSNYKLE 902
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 903 MVVVNGRGDGPRS---------ETKEFTT 922
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 328
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 385
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 441
Query: 182 L 182
+
Sbjct: 442 M 442
>gi|410952028|ref|XP_003982691.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Felis catus]
Length = 1212
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 263/604 (43%), Gaps = 59/604 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 534 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------D 584
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D LE+ + +D G Y CV +T+ +S + V P
Sbjct: 585 NGELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIY 644
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 645 DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----- 699
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS PS QY T A +P P+ +
Sbjct: 700 -----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVE 754
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 755 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGT 811
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 812 PTF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 869
Query: 415 ELIRENIRGRLIGHRIKYWK------EDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYV 467
L ++IRG L G+RI YWK + N L+ + ++ ++ GL+P + Y +
Sbjct: 870 PL--KSIRGHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYAL 927
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 928 NVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILT 984
Query: 528 GYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSS 584
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 985 EYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITE 1043
Query: 585 PAIT 588
A+T
Sbjct: 1044 EAVT 1047
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 131/616 (21%), Positives = 232/616 (37%), Gaps = 65/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G ++ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--SLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + G+ +++ + N G LEI A G Y CV ++ +G +
Sbjct: 483 LPTIEWFKGAK-GSALRDDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS 229
+ ++ P + + V + S T+ + + +T + N + F V
Sbjct: 539 HLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTVD 597
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKP 287
+H+ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 598 KDHLEVADVRDSDGGAYTCVANTTLDM------VSASAVLSVVAPTPTPAPIYDVP---- 647
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 346
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 -NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQ 704
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 705 TTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAE--PDTNPTAVEGLGSE 759
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ +TW P+ N G + +++ + ++D +E A ++ ++ ++ G
Sbjct: 760 PDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWASVVVANVSK--YIVSGTPTFV 815
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 816 PYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR 875
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ + + N I G+ + L P Y + V +
Sbjct: 876 GHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGK 935
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 936 GEGP-ASPDRVFNTPE 950
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTFYRNFKK-TLQIIQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NALGAIHHTISVTVKAAP-YWILAPQNLVLSPGEDGSLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|31418534|gb|AAH53033.1| Cntn2 protein, partial [Mus musculus]
Length = 543
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 230/445 (51%), Gaps = 11/445 (2%)
Query: 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEI 146
P I NL L+C A + +D+ + WT + + + ++ G L I
Sbjct: 20 PSSADINVGDNLTLQCHASHDPTMDLTFTWTLDDFPVDFDKPGGHYRRASVKETIGDLTI 79
Query: 147 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 206
NA G Y C+ ++ V S + TV+V GPPG PGGV V ++ T+ + W+ G N
Sbjct: 80 LNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPPGPPGGVVVRDIGDTTVQLSWSRGFDN 139
Query: 207 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 266
PI Y + ART + W V + + E G E + L+PW YEF+V A N
Sbjct: 140 HSPIAKYTLQARTPPSGKWKQVRTNPVNIE-----GNAETAQVLGLMPWMDYEFRVSASN 194
Query: 267 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 326
LG GEPS PS + T P APS + GGGG G+L+I+W P+ RE QN Y +
Sbjct: 195 ILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMSREYQNGDGFGYLLS 254
Query: 327 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSA 386
+R++ + +Q+ + + V S YT +EVK+++ N G GPES ++SA
Sbjct: 255 FRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYTPFEVKIRSYNRRGDGPESLTAIVYSA 313
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446
E+ P+VAP V+++G +S+ +NV+W P + +++ G L+G+ I+YWK + E A
Sbjct: 314 EEEPKVAPAKVWAKGSSSSEMNVSWEP---VLQDMNGILLGYEIRYWKAGDKEAAADRVR 370
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506
+ + A + GL P+TKY+V V AYN AG GP S T + P++PP + +
Sbjct: 371 TAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTMKPPPRRPPGNISWT-FS 429
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKV 531
+++ + W V P E + GYK+
Sbjct: 430 SSSLSLKWDPVVPLRNESTVTGYKM 454
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 183 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMS-- 240
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T + P T + VK+ +YN G
Sbjct: 241 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRG 300
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + + P+ P+ V KG + + ++V+W V ++GY++R W+
Sbjct: 301 DGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKA 359
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + L P +YH+ V A++ G G S A M
Sbjct: 360 G-DKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTM 413
>gi|410986301|ref|XP_003999449.1| PREDICTED: neurofascin isoform 1 [Felis catus]
Length = 1170
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 631
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 632 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 684
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 685 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 743
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 744 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 797 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYPDTVQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + ++ R R ++ L P + Y ++++ N G+G
Sbjct: 855 LREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 915 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 965
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 527 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 576
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 577 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 625
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 626 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 679
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 680 GSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPADVKGE 734
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 735 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 788
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V P
Sbjct: 789 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYP 848
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 849 DTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPRGVVSRLFPYSNYKLE 904
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 905 MVVVNGRGDGPRS---------ETKEFTT 924
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|380025831|ref|XP_003696667.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Apis florea]
Length = 1251
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 230/483 (47%), Gaps = 24/483 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C APKP W ++G + +GGR K ++G+L I V D+GIY+C A+
Sbjct: 439 DGKTVRITCRVFGAPKPAVKWIRNGQEL-TGGRYKTLDSGDLEIENVIFLDAGIYTCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E G L+V ++ P +AA RC+A T+ L + W NG
Sbjct: 498 NKFGEVEGSGNLVVKEHTKITDE-PEDYEVAAGSTATFRCNAVTDSSLTLTIDWLSNGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E+E I L IT + D+G Y CV + + + + T+IV+ P P
Sbjct: 557 I---DF-EMEPRFIRSTDYSLMITKTTELDSGTYTCVAHTELDEAKAQATLIVQDVPNAP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ V T A+I WT N PI Y I T + + +S+ + Y
Sbjct: 613 KLISVT-CMTTEASIHWTPMGDNRAPILRYTIQHNTTFTPDTWEISKDDVPATEQTYIVP 671
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ PW+ Y F+V+A N++G PS S T D PY+ P + G G +
Sbjct: 672 --------MSPWTNYTFRVLAWNKIGTSLPSPHSDVCTTLQDVPYKNPDNVMGKGTTPQN 723
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW +P+ + NAP Y++++R+ E + E + ++ + V P+ Y Y
Sbjct: 724 LVISWTVMPQIEHNAPKFMYRVYYRRDIPGEKWTIEDITDWKKNSLVVDNQPT---YQRY 780
Query: 363 EVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
++KV AIN+ G + E V +S ED+P AP ++ +ST+ +WN + E+
Sbjct: 781 KIKVVAINEKGECRVAPEEVIGYSGEDVPLQAPSNFTLNQVKSSTSAQFSWNSVP--EES 838
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+RG L G++I+ W E + E+ R R AL+ P +K YV+++AYN GP
Sbjct: 839 VRGELKGYKIQTWTEKDGEKGMREIDIRGGNRTHALVTKFIPFSKNYVRILAYNGRYSGP 898
Query: 480 ESE 482
SE
Sbjct: 899 PSE 901
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + ++C P P+ VW K+G +I + R G +L+I V+ D G Y+C
Sbjct: 252 ALRGKKIELYCIYGGTPLPQIVWSKNGEVIRTNDRIMQGNYGKSLIIKHVNFKDEGTYTC 311
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ +C A + ++ W HN
Sbjct: 312 EASNGVGDAKSYSIHLQVMAVPYFTIEPEIINAAEDETIEFKCEADGVPVPEIK--WIHN 369
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G I N P + + I + D Y C +++G +
Sbjct: 370 GKPISEAPPN----PRRKVTSNSIIIEKLTKKDTXNYGCNATNSLGYV 413
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 34/257 (13%)
Query: 377 ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---- 432
E++ +D+P AP+ + S +T ++ W P+ R I I H +
Sbjct: 596 EAKAQATLIVQDVPN-APK-LISVTCMTTEASIHWTPMGDNRAPILRYTIQHNTTFTPDT 653
Query: 433 W---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERT 488
W K+D P Y IV + P T Y +V+A+N G P + T
Sbjct: 654 WEISKDDVPATEQTY-----------IVPMSPWTNYTFRVLAWNKIGTSLPSPHSDVCTT 702
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE-PIIGYKVRVWEVDQDMSRANDTI 547
+ P K P V KG P + ++W V P E P Y+V +D+ TI
Sbjct: 703 LQDVPYKNPDNVMGKGTTPQNLVISWT-VMPQIEHNAPKFMYRVYY---RRDIPGEKWTI 758
Query: 548 IPVGN-TLDADIVDLSPG-KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALY 605
+ + ++ +VD P +RY ++V+A + G+ R++ + GE+ ++ S
Sbjct: 759 EDITDWKKNSLVVDNQPTYQRYKIKVVAINEKGECRVAPEEVIGYSGEDVPLQAPS---- 814
Query: 606 SASTTLLLVMSSTLYIF 622
+ TL V SST F
Sbjct: 815 --NFTLNQVKSSTSAQF 829
>gi|321459544|gb|EFX70596.1| hypothetical protein DAPPUDRAFT_309386 [Daphnia pulex]
Length = 1246
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 268/593 (45%), Gaps = 51/593 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V + C +PKP W +DG + +GGR ++ ++G+L I V+ D+G+YSC AT
Sbjct: 443 DGSAVNLTCKVFGSPKPLVKWIRDG-LELTGGRYRVMDSGDLEIRDVTFTDAGVYSCHAT 501
Query: 64 NVHGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
N G + G LIV GP YE +AA + RC+A + L++ W
Sbjct: 502 NKFGSANANGTLIVKERTVIRDGPEDYE-------VAAGQTATFRCNAVADSSLNLTIEW 554
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
H I D E E + L IT + D G+Y C K+ + K T+IV+
Sbjct: 555 LHADQLI---DF-EQEPRFVQSQDSSLTITKTTELDTGDYTCRAKTILDLAEDKATLIVQ 610
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P V + + + A I+WT N PI Y I T++ + VS +
Sbjct: 611 DVPNRPRMVGI-QCNNRDAAIEWTPSGDNRAPILTYTIQFNTSFTPDSWEVSFENVPATE 669
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R+ +E + PWS Y F+VIA N++G PS S TP D P + P + G
Sbjct: 670 TRF------KVE--MSPWSNYTFRVIARNKIGPSLPSDHSSMCTTPPDVPNKNPDNVEGR 721
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
G +L ++W P+P + N N +Y+++WR+ D + ++ + + + IP++
Sbjct: 722 GTSPTNLVVTWNPMPEIEHNGRNFHYRVYWRR--DIPGEDWNIEMISDWRQSSILIPNQP 779
Query: 358 YYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIE 415
+ Y +KV A N +G ++ VT +S ED+P AP ++ + + ++WNP+
Sbjct: 780 TFKRYRIKVVAFNQIGEANVAAQEVTGYSGEDVPLEAPSNFTLNQIIDERSAILSWNPVN 839
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
++++G G++I+ W E E A +S ++ A + P T V+V N+A
Sbjct: 840 --PDSVQGHFKGYKIETWTEKEGEIRAREMISNASK--AFVNKFVPHTVNLVRVRVINSA 895
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP---IIGYKVR 532
GP S+ +T P P + + ++ W+ EEP + GYK+
Sbjct: 896 YRGPASDVLSFKTPEGRP-GPVDYFEAAPLGSSAFYLIWKQ-----PEEPNGNLRGYKIF 949
Query: 533 VWEVD-----QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+V+ + R P A + L P +Y + + A + G+G
Sbjct: 950 YEKVEGTKIGPQIEREPPIRDPTQTR--AKLAGLEPNTKYRLHIKAMTIAGEG 1000
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 194/491 (39%), Gaps = 80/491 (16%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
++ +L I+ + D+G Y+C A + + E K LIV P+ R +
Sbjct: 573 QDSSLTITKTTELDTGDYTCRAKTILDLAEDKATLIVQDVPN------------RPRMVG 620
Query: 101 LRCSAHTEELLDVAYIWTHNG-----VRIGNMDLNELETP--------NINIDGGLLEIT 147
++C+ D A WT +G + + N TP N+ ++
Sbjct: 621 IQCNNR-----DAAIEWTPSGDNRAPILTYTIQFNTSFTPDSWEVSFENVPATETRFKVE 675
Query: 148 NASFADAGEYECVVKSTVG-KISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWT- 201
+ +++ + + ++ +G + + + + PP +P V+ T+ + W
Sbjct: 676 MSPWSNY-TFRVIARNKIGPSLPSDHSSMCTTPPDVPNKNPDNVEGRGTSPTNLVVTWNP 734
Query: 202 --DGATNGRPITHYKIIAR-----TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 254
+ NGR HY++ R +WN ++ + +++SI L+P
Sbjct: 735 MPEIEHNGRNF-HYRVYWRRDIPGEDWN--------------IEMISDWRQSSI---LIP 776
Query: 255 ----WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---IS 307
+ Y KV+A N++G ++ + D P +APS +I D +S
Sbjct: 777 NQPTFKRYRIKVVAFNQIGEANVAAQEVTGYSGEDVPLEAPSNFTLN--QIIDERSAILS 834
Query: 308 WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
W P+ + YKI + + E ++ + + +P +T V+V+
Sbjct: 835 WNPVNPDSVQGHFKGYKIETWTEKEGEIRAREMISNASKAFVNKFVP----HTVNLVRVR 890
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG-FNSTAINVTWNPIELIRENIRGRLI 426
IN GP S+V++ + E P P F S+A + W E N+RG I
Sbjct: 891 VINSAYRGPASDVLSFKTPEGRP--GPVDYFEAAPLGSSAFYLIWKQPEEPNGNLRGYKI 948
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
+ + P+ + T+ A + GL+P+TKY + + A AGEG + Y+E
Sbjct: 949 FYEKVEGTKIGPQIEREPPIRDPTQTRAKLAGLEPNTKYRLHIKAMTIAGEG--DDYYIE 1006
Query: 487 RTYRKAPQKPP 497
R R PP
Sbjct: 1007 RNTRNGNAYPP 1017
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G ++ ++C P P+ W K+G + +G L+I V +D+G Y C
Sbjct: 257 AHRGKSIELWCVFGGTPLPQIRWTKEGAALPAGRTTYSSYGKTLIIKSVDSEDAGNYECE 316
Query: 62 ATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAHTEELLDVAYIWTH 119
A+N G+ +S L VL P Y + P++ + A L + RC A+ ++ W H
Sbjct: 317 ASNGVGLAKSYSISLQVLAAP--YFTVEPEVYVGAEDELAEFRCEANGSPAPEIK--WIH 372
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG I +N P + + I +D G Y C +++G +
Sbjct: 373 NGKPIEEAAVN----PRRKVFPNRIVIERLQKSDTGNYGCNATNSIGYV 417
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PE 480
R ++ + I++ P+ V + + V + P + Y +V+A N G P
Sbjct: 639 RAPILTYTIQFNTSFTPDSWEVSFENVPATETRFKVEMSPWSNYTFRVIARNKIGPSLPS 698
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
+ T P K P V +G +PT + VTW + P E + W D
Sbjct: 699 DHSSMCTTPPDVPNKNPDNVEGRGTSPTNLVVTWNPM-PEIEHNGRNFHYRVYWRRDIPG 757
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
N +I I + KRY ++V+AF+ G+ +++ +T GE+
Sbjct: 758 EDWNIEMISDWRQSSILIPNQPTFKRYRIKVVAFNQIGEANVAAQEVTGYSGED 811
>gi|71891758|dbj|BAA34476.3| KIAA0756 protein [Homo sapiens]
Length = 1222
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 516 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 573
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 574 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 632
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 633 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 683
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 684 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 736
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 737 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 795
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 796 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 848
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 849 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 906
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 907 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 966
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 967 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1017
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 128/610 (20%), Positives = 223/610 (36%), Gaps = 90/610 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 415 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 472
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 473 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 523
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 524 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 578
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 579 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 628
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 629 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 677
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 678 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 731
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 732 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 786
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 787 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 840
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 841 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 900
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 901 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 956
Query: 571 VLAFSNGGDG 580
++ + GDG
Sbjct: 957 MVVVNGRGDG 966
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 325 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 382
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 383 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 439
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 440 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 495
Query: 182 L 182
+
Sbjct: 496 M 496
>gi|390466861|ref|XP_003733663.1| PREDICTED: neuronal cell adhesion molecule [Callithrix jacchus]
Length = 1304
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 264/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 123/614 (20%), Positives = 217/614 (35%), Gaps = 62/614 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + +R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVITNRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 543 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP 760
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 761 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 816
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 817 YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRG 876
Query: 525 PIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ GY++ W+ R + G+ + L P Y + V + G+
Sbjct: 877 HLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGE 936
Query: 580 GRMSSPAITFQMGE 593
G +SP F E
Sbjct: 937 GP-ASPDKVFNTPE 949
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPT--NRTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|119611934|gb|EAW91528.1| hCG16415, isoform CRA_e [Homo sapiens]
Length = 1124
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 548 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 605
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 606 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 664
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 665 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 715
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 716 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 768
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 769 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 827
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 828 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 880
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 881 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 938
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 939 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 998
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 999 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1049
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 447 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 504
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 505 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 555
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 556 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 610
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 611 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 660
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 661 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA----YLTVLGRP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 710 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 763
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 764 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 818
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 819 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 872
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 873 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 932
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 933 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 988
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 989 MVVVNGRGDGPRS---------ETKEFTT 1008
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 357 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 414
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 415 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 471
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 472 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 527
Query: 182 L 182
+
Sbjct: 528 M 528
>gi|410986309|ref|XP_003999453.1| PREDICTED: neurofascin isoform 5 [Felis catus]
Length = 1175
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 246/534 (46%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 631
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 632 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 684
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 685 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 743
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 744 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEI 796
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 797 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYPDTVQGQ 854
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + ++ R R ++ L P + Y ++++ N G+G
Sbjct: 855 LREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDG 914
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 915 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 965
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 527 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 576
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 577 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 625
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 626 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 679
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 680 GSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPADVKGE 734
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 735 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQT 788
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V P
Sbjct: 789 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYP 848
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 849 DTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPRGVVSRLFPYSNYKLE 904
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 905 MVVVNGRGDGPRS---------ETKEFTT 924
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|297681289|ref|XP_002818390.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Pongo abelii]
Length = 1192
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 225/615 (36%), Gaps = 64/615 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNDYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWFNV 228
+ P + + V + S + + + +I W + F V
Sbjct: 524 KDPTWIVKQPEYAVVQRGSMV------SFECKVKHDHTLILTVLWLKDNRELPSDERFTV 577
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
+H++ +V + N + V A L P+ +P+P Y+ P
Sbjct: 578 DKDHLVVADVSDDDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SEV + + P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP 741
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 742 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 797
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 798 YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 857
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ Q S+ N I G+ + L P Y + V + G
Sbjct: 858 HLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 916
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 917 EGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 434
>gi|301765664|ref|XP_002918249.1| PREDICTED: neurofascin-like isoform 3 [Ailuropoda melanoleuca]
Length = 1174
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y C+ + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + S Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGSTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI + WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAITLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + ++ R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILTGYTLK 964
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 138/634 (21%), Positives = 230/634 (36%), Gaps = 109/634 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S R E ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K TW E +
Sbjct: 526 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVTWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + IA EL + P D+P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLGRP-DRP 627
Query: 288 YQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
++ DL+ ++W +P + N+P Y + + + +FQ +
Sbjct: 628 RDL---------ELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHD 673
Query: 343 Y----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P
Sbjct: 674 HSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPA 728
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ G ++Y + ET + + T
Sbjct: 729 DVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGSRY 782
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W
Sbjct: 783 VVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAITLQW 842
Query: 515 RYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGK 565
V P + + Y+ W V Q +A+ P G+ + L P
Sbjct: 843 NRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPRGVVSRLFPYS 898
Query: 566 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
Y + ++ + GDG S E KEF +
Sbjct: 899 NYKLEMVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|410952032|ref|XP_003982693.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Felis catus]
Length = 1193
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 263/604 (43%), Gaps = 59/604 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALRDDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTITWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D LE+ + +D G Y CV +T+ +S + V P
Sbjct: 566 NGELPSDGRFTVDKDHLEVADVRDSDGGAYTCVANTTLDMVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 626 DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE----- 680
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS PS QY T A +P P+ +
Sbjct: 681 -----VSGTQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAEPDTNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWASVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWK------EDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYV 467
L ++IRG L G+RI YWK + N L+ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYAL 908
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 909 NVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILT 965
Query: 528 GYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSS 584
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 EYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITE 1024
Query: 585 PAIT 588
A+T
Sbjct: 1025 EAVT 1028
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 131/616 (21%), Positives = 232/616 (37%), Gaps = 65/616 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G ++ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--SLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 463
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + G+ +++ + N G LEI A G Y CV ++ +G +
Sbjct: 464 LPTIEWFKGAK-GSALRDDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS 229
+ ++ P + + V + S T+ + + +T + N + F V
Sbjct: 520 HLEIKDPTRIIKQPEYAVVQRGS-TVSFECKVKHDHTLTLTITWLKDNGELPSDGRFTVD 578
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKP 287
+H+ +V G + N + V A L P+ +P+P Y+ P
Sbjct: 579 KDHLEVADVRDSDGGAYTCVANTTLDM------VSASAVLSVVAPTPTPAPIYDVP---- 628
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 346
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 -NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQTEVSGTQ 685
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
A +++ Y Y +V A+N +G P SE +AE P P V G
Sbjct: 686 TTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEPSEQYLTKAAE--PDTNPTAVEGLGSE 740
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ +TW P+ N G + +++ + ++D +E A ++ ++ ++ G
Sbjct: 741 PDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWASVVVANVSK--YIVSGTPTFV 796
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 797 PYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR 856
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ + + N I G+ + L P Y + V +
Sbjct: 857 GHLQGYRIYYWKAQEGSLKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYALNVRVVNGK 916
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 917 GEGP-ASPDRVFNTPE 931
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPVIYWIKEDGTLPTNRTFYRNFKK-TLQIIQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NALGAIHHTISVTVKAAP-YWILAPQNLVLSPGEDGSLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|297681293|ref|XP_002818392.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Pongo abelii]
Length = 1180
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 225/615 (36%), Gaps = 64/615 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNDYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 523
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWFNV 228
+ P + + V + S + + + +I W + F V
Sbjct: 524 KDPTWIVKQPEYAVVQRGSMV------SFECKVKHDHTLILTVLWLKDNRELPSDERFTV 577
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
+H++ +V + N + V A L P+ +P+P Y+ P
Sbjct: 578 DKDHLVVADVSDDDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SEV + + P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP 741
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 742 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 797
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 798 YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 857
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ Q S+ N I G+ + L P Y + V + G
Sbjct: 858 HLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 916
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 917 EGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 434
>gi|119611932|gb|EAW91526.1| hCG16415, isoform CRA_c [Homo sapiens]
Length = 1127
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 551 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 608
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 609 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 667
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 668 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 718
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 719 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 771
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 772 AVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 830
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 831 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 883
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 884 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYSDTVQGQ 941
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 942 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 1001
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 1002 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMIGYTLK 1052
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 229/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 450 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 507
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 508 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 558
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 559 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 613
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 614 RLEVKDP------TRIYRMPEDQVARRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 663
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 664 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA----YLTVLGRP 712
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 713 -DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQF---EEDQFQPGVWHDHSKYP 766
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 767 GSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 821
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 822 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 875
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V
Sbjct: 876 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYS 935
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 936 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 991
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 992 MVVVNGRGDGPRS---------ETKEFTT 1011
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 360 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 417
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 418 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 474
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 475 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 530
Query: 182 L 182
+
Sbjct: 531 M 531
>gi|297681287|ref|XP_002818389.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Pongo abelii]
Length = 1211
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLILTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 225/615 (36%), Gaps = 64/615 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNDYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWFNV 228
+ P + + V + S + + + +I W + F V
Sbjct: 543 KDPTWIVKQPEYAVVQRGSMV------SFECKVKHDHTLILTVLWLKDNRELPSDERFTV 596
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
+H++ +V + N + V A L P+ +P+P Y+ P
Sbjct: 597 DKDHLVVADVSDDDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SEV + + P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEVSEQYLTKASEPDKNPTAVEGLGSEP 760
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 761 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 816
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 817 YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRG 876
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ Q S+ N I G+ + L P Y + V + G
Sbjct: 877 HLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 935
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 936 EGP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCVA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNDYGYLLANAFVNVLAEP 453
>gi|426227603|ref|XP_004007907.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Ovis aries]
Length = 1183
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 259/593 (43%), Gaps = 48/593 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W KD GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W D
Sbjct: 528 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------D 578
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
EL + +D L + + + D G Y CV +T+ +S + V P P ++
Sbjct: 579 HGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLE 638
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKE 245
+ + S + WT G N PIT + I + W + +E V G +
Sbjct: 639 LTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGTQT-------- 689
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L
Sbjct: 690 -TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLV 748
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +
Sbjct: 749 ITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLI 803
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KVQA+ND G PE V S ED+P VAP V NST V W+P+ L ++IRG
Sbjct: 804 KVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPL--KSIRGH 861
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L G+RI YWK + ++ + ++ ++ GL+P + Y + V N GEG
Sbjct: 862 LQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG 921
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD- 537
P S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 922 PASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTEYTLKYQPINS 978
Query: 538 -QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A + G G +++ AIT
Sbjct: 979 THELGPLVDLKIP-ANKTRWILKNLNISTRYKFYFYAQTAAGSGSQITEEAIT 1030
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 26/182 (14%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 373 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 431
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------W 117
+G + + VL PP+I +A N + A+ LLD A+ W
Sbjct: 432 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEW 482
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G+ ++ + N G LEI A G Y CV ++ +G + ++
Sbjct: 483 FKDAK--GSALREDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 537
Query: 178 GP 179
P
Sbjct: 538 DP 539
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|390466863|ref|XP_002751796.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Callithrix
jacchus]
Length = 1211
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 167/602 (27%), Positives = 264/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNDVHLEI-KDPTWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLTVLWLKD-----NEE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK N + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 123/614 (20%), Positives = 217/614 (35%), Gaps = 62/614 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + +R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVITNRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + A +Q + + H + T W +E + E
Sbjct: 543 KDP-------TWIIKQPEYAVVQRGGMVSFECKVKHDHTLVLT---VLWLKDNEELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPVPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVSGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNS 404
A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVTAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEP 760
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 761 DNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVP 816
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 817 YLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVQVNVVNSTLAEVHWDPVPLKSIRG 876
Query: 525 PIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ GY++ W+ R + G+ + L P Y + V + G+
Sbjct: 877 HLQGYRIYYWKTQNSPKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGE 936
Query: 580 GRMSSPAITFQMGE 593
G +SP F E
Sbjct: 937 GP-ASPDKVFNTPE 949
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 12/178 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C E P P W K+ I+ + R ++N L I+ VS DSG Y C A
Sbjct: 285 GNVLLLECIAEGLPTPLIYWAKEDGILPTN--RTSYKNFKKTLQITHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|405954827|gb|EKC22159.1| Contactin [Crassostrea gigas]
Length = 599
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 166/287 (57%), Gaps = 9/287 (3%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L P S+Y FKV+A N G G S+PS +Y P P +AP+ + G GK+G L I WEPL
Sbjct: 280 LSPGSSYRFKVLAVNIYGAGPTSAPSDEYPIPGAAPSKAPANVRRGEGKVGSLHIVWEPL 339
Query: 312 PREKQNAPNIYYKIFWR-KKNDTEFQSETLKEY--GNVGIAVVRIPSE-FYYTEYEVKVQ 367
P + Q+ I Y + WR + D ++ KE GNV V IP YY +YEV+V
Sbjct: 340 PPKDQHGWGIGYIVEWRLPQQDVRTENSWEKELLPGNVSEFVTTIPGRNQYYVQYEVRVT 399
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G G S + I SA+D+ P V+ +NSTA+ V W + R++++GRL G
Sbjct: 400 AYNMFGVGRSSPIQYIHSADDILVAVPNMVWVEAYNSTALMVHWTAVPNTRDSMKGRLRG 459
Query: 428 HRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+++ YW ED + T + + + AL++GL PDT YYV V YN+AG G +SE+Y
Sbjct: 460 YKVNYWLRYGEDENQATQASFSGQIEQ--ALVIGLLPDTWYYVSVQVYNDAGNGQKSEKY 517
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
++T+R+AP+ P+ VH+ + +V V++R VS EEEP+ GYK
Sbjct: 518 PQKTFRRAPRMYPTEVHVHSYSSDSVMVSFRGVSTQVEEEPLQGYKA 564
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY-RKAPQKPPSAVHIKGINPTTVHVTW 514
++ L P + Y KV+A N G GP S E AP K P+ V ++H+ W
Sbjct: 277 VLHLSPGSSYRFKVLAVNIYGAGPTSAPSDEYPIPGAAPSKAPANVRRGEGKVGSLHIVW 336
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT----IIPVGNTLDADIVDLSPGK----- 565
+ P + IGY V W + Q R ++ ++P GN ++ V PG+
Sbjct: 337 EPLPPKDQHGWGIGYIVE-WRLPQQDVRTENSWEKELLP-GNV--SEFVTTIPGRNQYYV 392
Query: 566 RYHMRVLAFSNGGDGRMSSP 585
+Y +RV A++ G GR SSP
Sbjct: 393 QYEVRVTAYNMFGVGR-SSP 411
>gi|326668800|ref|XP_002662564.2| PREDICTED: cell adhesion molecule with homology to L1CAM (close
homolog of L1) b, partial [Danio rerio]
Length = 769
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 239/525 (45%), Gaps = 37/525 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG +V + C ++P W K D G R + +NG+L I V ++D G YSC
Sbjct: 57 AVEGKSVVMHCKVFSSPASSITWSKADSANAVEGERFTVHQNGSLEIHNVMKEDMGEYSC 116
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 118
A N G L V P+ P + + A +Q C + D +W
Sbjct: 117 FAQNTEGKVAIAATLEV-KDPTRIVDPPRDLRVLAGTTIQFSCQPEFDPSFGDDFEVLWE 175
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G+ LN E ++ G+LEI N SF D G Y CV ++ V + + V
Sbjct: 176 KDGIA-----LNGSEDGRYILEDGVLEIINVSFGDQGFYACVARTPVDQDVAVAQLSVVD 230
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG--KE 236
P P V + E + S +QWT G + IT + + F S+H G +E
Sbjct: 231 VPDPPEDVILSEHNGRSVKLQWTPGDDHNSSITEFVL---------EFEESQHEPGSWRE 281
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G ++ L Y F+V A NE+G G PS + +Y TPA P + P I
Sbjct: 282 MMRVPGNHHSAPLK-LYGHVDYRFRVSAINEVGKGRPSQSTERYKTPASAPDKNPENIKI 340
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
++ I+WEPL + N P + YK+ +R+ +D ++ +K + V P+
Sbjct: 341 EAHLPHEMDINWEPLSPIEHNGPGLEYKVSYRRHGSDEDWTERMVKRHS---FLVKNTPT 397
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ YE+K+QA N G GP+ +++T +S ED P AP V N+T + V W +
Sbjct: 398 ---FVLYEIKIQAKNHAGWGPDPKIITAYSGEDFPSAAPDDVAVEVLNNTMVKVRWEHVH 454
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKV 469
++ I G L G+R+ +W+ + ++ + + T RN A++ GL+P ++Y + V
Sbjct: 455 --KDKIHGHLGGYRVSWWRLRSLLDSKKTHGDKHTLTFSGERNHAVVTGLKPFSEYSLIV 512
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
MA+N+ G GP S +T P + +A I V +TW
Sbjct: 513 MAFNSRGNGPGSHSVNFKTPEGVPGQ-AAAFSATNIQKHKVTLTW 556
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 126/603 (20%), Positives = 237/603 (39%), Gaps = 90/603 (14%)
Query: 38 KIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-GPSYYEQLPPKITIAAH 96
KI ++G + I + ++S +Y C ATN HG + +++++ P + +
Sbjct: 1 KILKDGTISIHNANTENSAVYQCEATNKHGTILANANIMIMNIQPLILTENNLQYMAVEG 60
Query: 97 RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAG 155
+++ + C + + + + N +E + G LEI N D G
Sbjct: 61 KSVVMHCKVFSSPASSITWSKADSA--------NAVEGERFTVHQNGSLEIHNVMKEDMG 112
Query: 156 EYECVVKSTVGKISTKTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH 212
EY C ++T GK++ T+ V+ P + P ++V+ TIQ++ +P
Sbjct: 113 EYSCFAQNTEGKVAIAATLEVKDPTRIVDPPRDLRVL----AGTTIQFS-----CQP--E 161
Query: 213 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
+ ++ W + G E RY E V+ + +G+
Sbjct: 162 FDPSFGDDFEVLWEKDGIALNGSEDGRY----------------ILEDGVLEIINVSFGD 205
Query: 273 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE-----KQNAPNIYYKIFW 327
+ TP D+ + LS+ P P E + N ++ K+ W
Sbjct: 206 QGFYACVARTPVDQDV-----------AVAQLSVVDVPDPPEDVILSEHNGRSV--KLQW 252
Query: 328 RKKND-----TEFQSETLKEYGNVGI--AVVRIPSEFY--------YTEYEVKVQAINDV 372
+D TEF E + G ++R+P + + +Y +V AIN+V
Sbjct: 253 TPGDDHNSSITEFVLEFEESQHEPGSWREMMRVPGNHHSAPLKLYGHVDYRFRVSAINEV 312
Query: 373 GPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
G G S+ + + P P+ + +++ W P+ I N G + +++
Sbjct: 313 GKGRPSQSTERYKTPASAPDKNPENIKIEAHLPHEMDINWEPLSPIEHN--GPGLEYKVS 370
Query: 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYR 490
Y + + E+ + R + + +V P Y +K+ A N+AG GP+ + +
Sbjct: 371 YRRHGSDED----WTERMVKRHSFLVKNTPTFVLYEIKIQAKNHAGWGPDPKIITAYSGE 426
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE----VDQDMSRAND- 545
P P V ++ +N T V V W +V + GY+V W +D + +
Sbjct: 427 DFPSAAPDDVAVEVLNNTMVKVRWEHVHKDKIHGHLGGYRVSWWRLRSLLDSKKTHGDKH 486
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALY 605
T+ G A + L P Y + V+AF++ G+G S ++ F+ E G A +
Sbjct: 487 TLTFSGERNHAVVTGLKPFSEYSLIVMAFNSRGNGP-GSHSVNFKT---PEGVPGQAAAF 542
Query: 606 SAS 608
SA+
Sbjct: 543 SAT 545
>gi|338724586|ref|XP_001489278.3| PREDICTED: neurofascin [Equus caballus]
Length = 1169
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 245/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIHKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRESWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYSDTVQGL 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + ++ R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKSLWVSQKRQQASFPGDRLRGVVPRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY +R
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILTGYTLR 964
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 133/629 (21%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRASGNPKPTIQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIHKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPADVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRESWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYS 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGLLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRLRGVVPRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A + W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRASGNPKPTIQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|348502549|ref|XP_003438830.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
Length = 1149
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 239/525 (45%), Gaps = 44/525 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG + C +P P+ W K G G R K NG L I + +D G Y C +
Sbjct: 434 EGSRTFLDCQYFGSPLPELRWSKYGQGNLEGNRFKTHSNGTLEIKHIKIEDQGTYVCVVS 493
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G DE + R+ V P P + + +++L C + + W N
Sbjct: 494 NIAGRDEDQVRVEVKE-PILIVTRPQSMKVMRATDVRLECGVKADVTTPITTTWLKNK-- 550
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
++ L I++D L ITN + D G Y CV+KS + + S ++V P P
Sbjct: 551 -KHLTLGW----RISMDESNLVITNVNTGDEGNYTCVIKSELEQKSASAHLMVMDRPNPP 605
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNW-NSTWFNVSEHVIGKEVDRYT 241
+++ + ++ + + W G +N PIT + + +W W N+S Y
Sbjct: 606 TNLELSDPYERTVRLSWVPGDSNHSPITGFLVQYDDDDWLPGKWRNLST---------YP 656
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G + I + L+P++ YEF+VIA NE+G PS PS ++ T P P + G G
Sbjct: 657 GNLNSVILH-LIPFTYYEFRVIAINEIGASRPSRPSKRFQTSGAPPDIIPKNLKGVGTWR 715
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYY 359
++ ISWEPL + N P++ Y ++WR+++ E E+ N ++ I +
Sbjct: 716 NNMEISWEPLTYREWNGPHLKYLVWWRRRDSRE-------EWKNATTKWLKYYIYDADTF 768
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T YE+KVQA+ND G GPES VV +S E P AP + ST + + W+P+ +
Sbjct: 769 TPYEIKVQAVNDFGLGPESPVVIGYSGEGRPTTAPLNLRVSDIESTQVTLHWDPV--TSD 826
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG----------LQPDTKYYVKV 469
I G L +++ YW++ + + +++ R ++ A + L P + Y + +
Sbjct: 827 TIMGELKEYKVYYWRDSS--QLRWHWVDRGMKSKAFPINGPDPSGVLDDLIPYSNYKMYI 884
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ NN EGP S T P P S I+ + +++V W
Sbjct: 885 VVANNRYEGPPSNNIHFSTPEGVPSAPRS-FRIQQRHLDSIYVDW 928
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 135/609 (22%), Positives = 232/609 (38%), Gaps = 93/609 (15%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCTAT 63
N + C + AP+P W +G I + R++ L+ V+ +++ +Y C A+
Sbjct: 343 NGRLVCRADGAPRPTISWFINGEPIETATPLPNRQV-SGETLIFRSVTTENTAVYQCNAS 401
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI------- 116
N +G + + VLH P+I A RN ++ + + LD Y
Sbjct: 402 NQYGYLLANAFINVLHA-------TPRILGA--RNEFIKVTEGSRTFLDCQYFGSPLPEL 452
Query: 117 -WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W+ G GN++ N +T + G LEI + D G Y CVV + G+ + V
Sbjct: 453 RWSKYGQ--GNLEGNRFKTHS----NGTLEIKHIKIEDQGTYVCVVSNIAGRDEDQVRVE 506
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV-IG 234
V+ P + Q ++V + AT+ R K T +TW +H+ +G
Sbjct: 507 VKEPILIVTRPQSMKVMR----------ATDVRLECGVKADVTTPITTTWLKNKKHLTLG 556
Query: 235 KEVDRYTGRKEASIENV---------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
+ I NV V S E K + + + P+ P+ N
Sbjct: 557 WRIS--MDESNLVITNVNTGDEGNYTCVIKSELEQKSASAHLMVMDRPNPPT---NLELS 611
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY-G 344
PY+ R +SW +P + ++P + + + + + L Y G
Sbjct: 612 DPYERTVR------------LSW--VPGDSNHSPITGFLVQYDDDDWLPGKWRNLSTYPG 657
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM-PQVAPQGVFSRGFN 403
N+ ++ + +T YE +V AIN++G S F P + P+ + G
Sbjct: 658 NLNSVILHL---IPFTYYEFRVIAINEIGASRPSRPSKRFQTSGAPPDIIPKNLKGVGTW 714
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD- 462
+ ++W P+ N G + + + + + D+ EE T W D
Sbjct: 715 RNNMEISWEPLTYREWN--GPHLKYLVWWRRRDSREE-----WKNATTKWLKYYIYDADT 767
Query: 463 -TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T Y +KV A N+ G GPES + + P P + + I T V + W V+
Sbjct: 768 FTPYEIKVQAVNDFGLGPESPVVIGYSGEGRPTTAPLNLRVSDIESTQVTLHWDPVTSDT 827
Query: 522 EEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRV 571
+ YKV W VD+ M P+ + ++ DL P Y M +
Sbjct: 828 IMGELKEYKVYYWRDSSQLRWHWVDRGM---KSKAFPINGPDPSGVLDDLIPYSNYKMYI 884
Query: 572 LAFSNGGDG 580
+ +N +G
Sbjct: 885 VVANNRYEG 893
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 13/203 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTA 62
+G + + C P P W KDG + R K+ N + I S +D+G Y+CTA
Sbjct: 249 QGEELLLECIAAGMPTPHITWAKDGEDLQVTSRMKVKNFNKMIQIPKASFEDAGEYTCTA 308
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G E + V P + E+ P + +A N +L C A ++ W NG
Sbjct: 309 KNRLGYAEHTITVRVKATPFWLEK-PTNLILAPEENGRLVCRADGAPRPTIS--WFINGE 365
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
I PN + G L + + + Y+C + G + + ++ P
Sbjct: 366 PIETA----TPLPNRQVSGETLIFRSVTTENTAVYQCNASNQYGYLLANAFINVLHATPR 421
Query: 182 LPGG----VQVVEVHKTSATIQW 200
+ G ++V E +T Q+
Sbjct: 422 ILGARNEFIKVTEGSRTFLDCQY 444
>gi|170044415|ref|XP_001849844.1| cell adhesion molecule [Culex quinquefasciatus]
gi|167867576|gb|EDS30959.1| cell adhesion molecule [Culex quinquefasciatus]
Length = 1218
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 261/592 (44%), Gaps = 51/592 (8%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NVT+ C APKP+ W ++G + +GGR ++ G+L I V D+G Y+C A N
Sbjct: 392 NVTLTCRVFGAPKPEVKWIRNGREL-TGGRYQVLPTGDLFIRGVEFSDAGQYTCNAVNKL 450
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + G LIV ++ P + A RC+A + L + W NG I
Sbjct: 451 GEKSADGELIVKEHTKIIDE-PQDYEVVAGTPATFRCNAVADSSLALTIEWLTNGEPI-- 507
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D + + + + L IT D G Y CV K+ + ++ T+ V P P +
Sbjct: 508 -DF-DTQPRFVMTNDYSLTITKTIELDTGVYSCVAKTDLDEVIANATLTVYDRPNAPS-L 564
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKE 245
+ +E H+ AT+ WT N PI HY I T++ TW S+ V +
Sbjct: 565 EGIECHQAVATLSWTPNGDNRSPILHYTIEYNTSFTPDTWEISSKDVPATDF-------T 617
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
S++ + PWS Y F+VIA N++G PS S T P++ P + G G + +L
Sbjct: 618 YSVD--MSPWSNYTFRVIAINKVGPSSPSGHSEVCTTQPSVPFKNPDNVEGQGTEPNNLV 675
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I W P+ + NAP Y+++W+ + + +E + ++ + + P+ + Y +
Sbjct: 676 IKWTPMSEIEHNAPRFQYRVYWQLDTGVDNWNTEDIFDWQQTELVIRDQPT---FQRYRI 732
Query: 365 KVQAINDVGPGPESEVVTI-FSAEDMPQVAPQGVFSRGFNSTAINVT--------WNPIE 415
KV AIN++G + I +S ED P APQ N T I VT WNP+
Sbjct: 733 KVVAINEMGEANVAPKEVIGYSGEDKPLEAPQ-------NFTLIQVTAPTSAILSWNPVS 785
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+++RG G++I+ W E + EE L AL+ PD+ + +++AYN
Sbjct: 786 --EDSVRGHFKGYKIQTWTEADGEENLREVLVTADSKQALVTDFIPDSTNFARILAYNGR 843
Query: 476 GEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
GP S T P+ P+ + + I + ++ P + GYK+
Sbjct: 844 FNGPASTTLSFDT----PEGVPNTIQTLDAIPLGSSAFLLKWKKPLQPNGKLTGYKIYYE 899
Query: 535 EVDQD-----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
EV M R + I +A + L P +Y + V+ + G+G+
Sbjct: 900 EVKGTSFGPRMER--EPHISDARLTEAKLGKLKPSTKYRVHVVGTTRAGEGQ 949
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 146/615 (23%), Positives = 237/615 (38%), Gaps = 106/615 (17%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C PKP +W +G I R+ + + + + D+G Y C ATN G
Sbjct: 304 CEATGVPKPNIIWIHNGKPIEQTPPNPRRFVSGNRIFFNKLEKSDTGNYGCNATNSLGYV 363
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + P + RN+ L C +V W NG +
Sbjct: 364 YKDVYLNVLALPPEISEPPRREHTVDRRNVTLTCRVFGAPKPEVK--WIRNGRELTGGRY 421
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV------------- 176
L T G L I F+DAG+Y C + +G+ S +IV
Sbjct: 422 QVLPT-------GDLFIRGVEFSDAGQYTCNAVNKLGEKSADGELIVKEHTKIIDEPQDY 474
Query: 177 EGPPGLPGGVQVVEVHKTS--ATIQWTDGATNGRPI---THYKIIARTNWNSTWFNVSEH 231
E G P + V +S TI+W TNG PI T + + +++ T
Sbjct: 475 EVVAGTPATFRCNAVADSSLALTIEW---LTNGEPIDFDTQPRFVMTNDYSLT------- 524
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG-YGEPSSPSPQYNTPADKPYQA 290
I K ++ TG + L +VIA L Y P++PS + + +QA
Sbjct: 525 -ITKTIELDTGVYSCVAKTDLD-------EVIANATLTVYDRPNAPSLE----GIECHQA 572
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
+ ++SW P +P ++Y I + +T F +T + I+
Sbjct: 573 VA------------TLSW--TPNGDNRSPILHYTIEY----NTSFTPDTWE------ISS 608
Query: 351 VRIP-SEFYY-------TEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFS 399
+P ++F Y + Y +V AIN VGP SEV T + +P P V
Sbjct: 609 KDVPATDFTYSVDMSPWSNYTFRVIAINKVGPSSPSGHSEVCT--TQPSVPFKNPDNVEG 666
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---LI 456
+G + + W P+ I N +R+ YW+ D + + + +W L+
Sbjct: 667 QGTEPNNLVIKWTPMSEIEHN--APRFQYRV-YWQLDTGVDN---WNTEDIFDWQQTELV 720
Query: 457 VGLQPD-TKYYVKVMAYNNAGEGPESERYL--ERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ QP +Y +KV+A N GE + + + K + P + I+ PT+ ++
Sbjct: 721 IRDQPTFQRYRIKVVAINEMGEANVAPKEVIGYSGEDKPLEAPQNFTLIQVTAPTSAILS 780
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W VS GYK++ W + D ++ ++ A + D P R+LA
Sbjct: 781 WNPVSEDSVRGHFKGYKIQTW-TEADGEENLREVLVTADSKQALVTDFIPDSTNFARILA 839
Query: 574 FSNGGDGRMSSPAIT 588
+ +GR + PA T
Sbjct: 840 Y----NGRFNGPAST 850
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIY 58
A G + +FC P P+ VW KDG I KI +N +L+I + +D G Y
Sbjct: 202 ALRGKKIELFCIYGGTPLPQVVWTKDGRAIQWND--KIQQNNYGKSLVIKHATFEDQGTY 259
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C ++N G ES + + Y+ P + A + RC A ++ IW
Sbjct: 260 TCESSNGVGSAESYSIRLEVQAIPYFTTQPESVIKAEEETAEFRCEATGVPKPNI--IWI 317
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
HNG I N P + G + +D G Y C +++G +
Sbjct: 318 HNGKPIEQTPPN----PRRFVSGNRIFFNKLEKSDTGNYGCNATNSLGYV 363
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 2/179 (1%)
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG-EGPE 480
R ++ + I+Y P+ + ++ V + P + Y +V+A N G P
Sbjct: 585 RSPILHYTIEYNTSFTPDTWEISSKDVPATDFTYSVDMSPWSNYTFRVIAINKVGPSSPS 644
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
+ T P K P V +G P + + W +S P Y+V W++D +
Sbjct: 645 GHSEVCTTQPSVPFKNPDNVEGQGTEPNNLVIKWTPMSEIEHNAPRFQYRV-YWQLDTGV 703
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
N I + I D +RY ++V+A + G+ ++ + GE+K ++
Sbjct: 704 DNWNTEDIFDWQQTELVIRDQPTFQRYRIKVVAINEMGEANVAPKEVIGYSGEDKPLEA 762
>gi|345797902|ref|XP_003434374.1| PREDICTED: neurofascin [Canis lupus familiaris]
Length = 1169
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+I L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + N + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 964
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V A++++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAILQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPADVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNATVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GTDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|345797908|ref|XP_856076.2| PREDICTED: neurofascin isoform 5 [Canis lupus familiaris]
Length = 1174
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+I L P+ Y+F+VIA NE+G PS PS +Y T P P+ + G G + ++ I
Sbjct: 684 AILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + N + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE + V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P +IGY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILIGYTLK 964
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 132/629 (20%), Positives = 227/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V A++++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 679 GSVNSAILQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPADVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETWNNATVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GTDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|40788219|dbj|BAA20801.2| KIAA0343 [Homo sapiens]
Length = 1187
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 464 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 522 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 575
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 576 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 633
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 634 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 687
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+G + + N L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 688 ---VSGTQTTAQLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 743
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 744 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 800
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 801 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 858
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 859 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 916
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 917 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 973
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 974 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1032
Query: 587 IT 588
+T
Sbjct: 1033 VT 1034
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 129/617 (20%), Positives = 222/617 (35%), Gaps = 68/617 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 363 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 419
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 420 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 477
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 478 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 528
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 529 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 580
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 581 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 635
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 636 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 688
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A + + Y+ +V A+N +G SE + + P P V G
Sbjct: 689 SGTQTTAQLNLSPYVNYS---FRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 745
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 746 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 801
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 802 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 861
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 862 IRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG 921
Query: 577 GGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 922 KGEGP-ASPDRVFNTPE 937
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 273 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 331 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 388 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 441
>gi|168278575|dbj|BAG11167.1| neuronal cell adhesion molecule precursor [synthetic construct]
Length = 1180
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 267/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+G + + N L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ---VSGTQTTAQLN-LSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 225/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 521
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 522 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 681
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A + + Y+ +V A+N +G SE + + P P V G
Sbjct: 682 SGTQTTAQLNLSPYVNYS---FRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 913
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 914 GKGEGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|410900131|ref|XP_003963550.1| PREDICTED: neurofascin-like [Takifugu rubripes]
Length = 1147
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 238/523 (45%), Gaps = 40/523 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG + C +P P+ W K G G R K NG L I + D G Y C +
Sbjct: 432 EGSRAFLDCRFFGSPVPELRWSKYGQGNLEGNRFKTHSNGTLEIKSIEVVDQGTYLCVVS 491
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G DE++ I + P+ P I + +++ C+ T+ V W G +
Sbjct: 492 NVAGRDENQVH-IEVKEPTVIVTRPTDIKVIRGTDVRFECAVKTDATTPVTTTWL-KGTK 549
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ I++D L I N + AD+G Y C+V++ + S ++V P P
Sbjct: 550 PVTLGWR------ISMDESNLVIGNTNPADSGNYTCLVQTELEHKSASAHLMVMDRPDPP 603
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNW-NSTWFNVSEHVIGKEVDRYT 241
+++ E H+ S + W G +N PIT Y + +W W N+S Y
Sbjct: 604 TDLELSEPHERSVRLSWVPGNSNHNPITDYLVQYDDDDWLPGKWKNLS---------LYP 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G S+ L+P++ YEF+VIA NE+G PS S ++ + P P + G G
Sbjct: 655 GDLN-SVTLHLLPFTYYEFRVIAINEIGMSRPSRRSTRFQSSGAPPDVIPKNLKGVGTWR 713
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
++ ISWEPL + N P++ Y ++WR+++ E ++ I +T
Sbjct: 714 NNMEISWEPLAYREWNGPHLKYLVWWRRRDSREEWKNATTKWSKYYIYDADT-----FTP 768
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
YE+K+QA+ND G GPES VVT FS ED P AP + S + V W+P+ R ++
Sbjct: 769 YELKIQAVNDFGLGPESPVVTGFSGEDRPLTAPLNLRVSDIESNQVTVHWDPVS--RNSM 826
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA----------LIVGLQPDTKYYVKVMA 471
G L ++I YW++ + + +++R ++ A ++ GL P + Y + ++
Sbjct: 827 MGELKEYKIYYWRDSS--QLRWLWVNRAMKSQAFSTNNGEPSGVVTGLYPYSNYKMYIVV 884
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
NN EGP S T P P S I+ + +++V W
Sbjct: 885 ANNRFEGPPSNNIHFSTPEGVPSVPRS-FRIQQRHLDSIYVDW 926
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 208/554 (37%), Gaps = 88/554 (15%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHG 67
+ C + AP+P W +G S + E L++ V+ ++ +Y C A+N +G
Sbjct: 344 MVCRSDGAPRPTITWFINGEPTDSSTLQPNVEVSGETLVLRSVTTLNNAVYQCNASNQYG 403
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTH 119
+ + VLH P+I RN L+ + LD + W+
Sbjct: 404 YLLANAFVNVLHA-------TPRIL--GSRNEYLKIIEGSRAFLDCRFFGSPVPELRWSK 454
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G GN++ N +T + G LEI + D G Y CVV + G+ + + V+ P
Sbjct: 455 YGQ--GNLEGNRFKTHS----NGTLEIKSIEVVDQGTYLCVVSNVAGRDENQVHIEVKEP 508
Query: 180 PGL---PGGVQVV---EVHKTSAT---------IQWTDGATNGRPITHYKIIARTNWNST 224
+ P ++V+ +V A W G +P+T W +
Sbjct: 509 TVIVTRPTDIKVIRGTDVRFECAVKTDATTPVTTTWLKGT---KPVT-------LGWRIS 558
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
+ S VIG +G ++ L E K + + + P P+ +
Sbjct: 559 -MDESNLVIGNTNPADSGNYTCLVQTEL------EHKSASAHLMVMDRPDPPT---DLEL 608
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY- 343
+P++ R +SW +P + P Y + + + + + L Y
Sbjct: 609 SEPHERSVR------------LSW--VPGNSNHNPITDYLVQYDDDDWLPGKWKNLSLYP 654
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM-PQVAPQGVFSRGF 402
G++ + + +T YE +V AIN++G S T F + P V P+ + G
Sbjct: 655 GDLNSVTLHL---LPFTYYEFRVIAINEIGMSRPSRRSTRFQSSGAPPDVIPKNLKGVGT 711
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ ++W P+ N G + + + + + D+ EE T W+ D
Sbjct: 712 WRNNMEISWEPLAYREWN--GPHLKYLVWWRRRDSREE-----WKNATTKWSKYYIYDAD 764
Query: 463 --TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
T Y +K+ A N+ G GPES + P P + + I V V W VS +
Sbjct: 765 TFTPYELKIQAVNDFGLGPESPVVTGFSGEDRPLTAPLNLRVSDIESNQVTVHWDPVSRN 824
Query: 521 FEEEPIIGYKVRVW 534
+ YK+ W
Sbjct: 825 SMMGELKEYKIYYW 838
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G + I C P P+ W+KDG ++ S + K F N + I S +D+G Y CTA
Sbjct: 248 GEELLIECIAAGVPTPRITWRKDGEDLVVRSPMKVKNF-NKMIQIPKASFEDAGEYVCTA 306
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G E + V P + E+ P + +A + ++ C + + W NG
Sbjct: 307 ENKLGYIEHTITVQVKAAPFWLER-PGDLVLAPEEDGRMVCRSDGAPRPTIT--WFINGE 363
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ L PN+ + G L + + + + Y+C + G + V ++ P
Sbjct: 364 PTDSSTLQ----PNVEVSGETLVLRSVTTLNNAVYQCNASNQYGYLLANAFVNVLHATPR 419
Query: 182 LPGG 185
+ G
Sbjct: 420 ILGS 423
>gi|266634534|dbj|BAI49425.1| neuroglian [Mythimna separata]
Length = 1254
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/590 (26%), Positives = 265/590 (44%), Gaps = 45/590 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + C APKP W KD ++ +GG+ I G+L+I VS D G Y C A
Sbjct: 447 DGSEAVLKCRVFGAPKPLVKWMKD-DVDVTGGKYNITPEGDLVIRDVSYTDVGTYQCYAK 505
Query: 64 NVHGMDES------KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
N G + K R ++ P +YE +AA + RC+A+ ++ L + IW
Sbjct: 506 NKFGEKSAFGSLDVKKRTVITDKPEHYE-------VAAGSSATFRCNANADDSLKLQIIW 558
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
++G +I D + D LL I++ + D+GEY C+ ++ + + + T+ V+
Sbjct: 559 LNDGQQI---DFENQPRFRMTNDYSLL-ISDTTELDSGEYTCIARTAIDEARAQATLTVQ 614
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKE 236
P P ++ +E H+ +AT++W N PI Y I T + TW S++V +
Sbjct: 615 DKPN-PPVIESIECHEKTATLRWHSMGDNRAPILRYSIQYNTTFTPDTWDLASDNVPAID 673
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
S L PW+ Y F+V A N++G PSS S T D P + P + G
Sbjct: 674 T---------SWTVQLSPWANYTFRVAAWNKIGPSTPSSHSDVCTTQPDVPDKNPDNVVG 724
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
G ++ ISW +P+ + N P YY + WR+ + E ++++ V P+
Sbjct: 725 EGSDPTNMVISWSKMPQIEHNGPGFYYLVSWRRNITGQPWSEEQVRDWQQTDYVVTNTPT 784
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQG-VFSRGFNSTAINVTWNP 413
+ Y++KV A+N G + V + +S ED+P APQ + T + WNP
Sbjct: 785 ---FVPYKLKVTAVNYKGTSNVTPVEVLGWSGEDIPLQAPQNFTLVQVTTGTTALLNWNP 841
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + E++RG G++I+ W D E+ L + + AL+ +P K +++ YN
Sbjct: 842 V--LPESVRGHFKGYKIQTWV-DGEEDRLKEILVKADASSALVSKFKPYKKNNARILVYN 898
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEPIIGYKVR 532
GP S+ T P+ P V + P + + ++ P E + GYK+
Sbjct: 899 GRFNGPPSDTLSFHT----PEGKPGTVKSFEVYPIGSSAMLLKWDKPVDENGVLTGYKIY 954
Query: 533 VWEVD-QDMSRANDTIIPVGNTLD-ADIVDLSPGKRYHMRVLAFSNGGDG 580
+V + + + D A + L P +Y + + A + G+G
Sbjct: 955 YQKVTGTSLGPLQERKKEIDPKFDRAKLAGLEPNTKYRIEIRAKTKAGEG 1004
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V ++C P P+ VWKK+G +I+ S G + L+I + +D G Y+C
Sbjct: 260 ALKGKKVELYCIYGGTPLPQIVWKKNGRSILSSQGITQDNYGKTLVIKYPTYEDQGTYTC 319
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S L+ + ++ P +A + +++C A + W HN
Sbjct: 320 EVSNGVGTAQSYSILLNIEAAPFFTVEPEIQNLAEGESAEIKCEASGTPTPKIT--WIHN 377
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-P 179
G I + N P + + ITN D G Y C S++G + + V+ P
Sbjct: 378 GKPIEQAEPN----PRRQVTANTIVITNLVKKDTGNYGCNATSSIGYVYKDVYINVQSIP 433
Query: 180 PGLPGG 185
P + G
Sbjct: 434 PEIKEG 439
>gi|119603836|gb|EAW83430.1| neuronal cell adhesion molecule, isoform CRA_d [Homo sapiens]
Length = 1084
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 265/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 361 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 418
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 419 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 472
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 473 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 530
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 531 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 584
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 585 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 640
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 641 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 697
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 698 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 755
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 756 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 813
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 814 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 870
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 871 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 929
Query: 587 IT 588
+T
Sbjct: 930 VT 931
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 133/618 (21%), Positives = 226/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 260 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 316
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 317 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 374
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 375 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 425
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 426 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 477
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 478 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 532
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 533 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 585
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 586 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 642
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 643 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 698
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 699 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 758
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 759 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 817
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 818 GKGEGP-ASPDRVFNTPE 834
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 170 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 227
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 228 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 284
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 285 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 338
>gi|380810880|gb|AFE77315.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1180
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 469 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 526
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 527 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 585
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 586 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 636
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 637 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 690 AVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 748
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 749 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 801
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 802 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYPDTVQGQ 859
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 860 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 919
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY ++
Sbjct: 920 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMTGYTLK 970
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 228/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 368 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 425
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 426 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 476
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 477 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 531
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 532 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 581
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 582 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 630
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 631 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKYP 684
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 685 GSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 739
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 740 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 793
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V P
Sbjct: 794 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYP 853
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 854 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 909
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 910 MVVVNGRGDGPRS---------ETKEFTT 929
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 278 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 335
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 336 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 392
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 393 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 448
Query: 182 L 182
+
Sbjct: 449 M 449
>gi|380788299|gb|AFE66025.1| neurofascin isoform 4 precursor [Macaca mulatta]
Length = 1169
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMTGYTLK 964
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 228/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|221042958|dbj|BAH13156.1| unnamed protein product [Homo sapiens]
Length = 1153
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 265/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 130/617 (21%), Positives = 223/617 (36%), Gaps = 68/617 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 540
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 541 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSWT--PGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ R + G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG 933
Query: 577 GGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 934 KGEGP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|109731501|gb|AAI14571.1| NRCAM protein [Homo sapiens]
Length = 1180
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 265/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 133/618 (21%), Positives = 226/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 521
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 522 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 681
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 682 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 913
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 914 GKGEGP-ASPDRVFNTPE 930
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|380810884|gb|AFE77317.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1158
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 238/518 (45%), Gaps = 43/518 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 447 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 504
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 505 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 563
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 564 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 614
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 615 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 667
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 668 AVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 726
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 727 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 779
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 780 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYPDTVQGQ 837
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 838 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 897
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
P SE T P P ++ N T+++ W +
Sbjct: 898 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH 934
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 228/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 346 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 404 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 454
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 455 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 509
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 510 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 559
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 560 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 608
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 609 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKYP 662
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 663 GSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 717
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 718 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 771
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V P
Sbjct: 772 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYP 831
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 832 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 887
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 888 MVVVNGRGDGPRS---------ETKEFTT 907
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 256 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 313
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 314 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 370
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 371 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 426
Query: 182 L 182
+
Sbjct: 427 M 427
>gi|109730333|gb|AAI15737.1| NRCAM protein [Homo sapiens]
Length = 1192
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 265/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 515 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 568
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 569 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1025
Query: 587 IT 588
+T
Sbjct: 1026 VT 1027
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 133/618 (21%), Positives = 226/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 413 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 470
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 471 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 521
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 522 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 573
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 574 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 629 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 681
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 682 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 738
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 739 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 794
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 795 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 854
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 855 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 913
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 914 GKGEGP-ASPDRVFNTPE 930
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 323
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 324 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 380
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 381 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|380788287|gb|AFE66019.1| neurofascin isoform 3 precursor [Macaca mulatta]
Length = 1174
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMTGYTLK 964
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 228/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELD----QDLAKAYLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|350588954|ref|XP_003130319.3| PREDICTED: neuronal cell adhesion molecule isoform 1 [Sus scrofa]
Length = 1304
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 263/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPSIEWFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 534 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------D 584
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
+EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 585 HSELPSDGRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 644
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 645 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGT 703
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 704 QT---------TAQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVE 754
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 755 GLGSEPDNLVITWKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 811
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y VKVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 812 PTF--VPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 869
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 870 PL--KSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 927
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S T P P S +K +NPT +T + PS +
Sbjct: 928 VRVVNGKGEGPASPDRAFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTE 984
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 985 YTLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEE 1043
Query: 586 AIT 588
A+T
Sbjct: 1044 AVT 1046
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 130/621 (20%), Positives = 228/621 (36%), Gaps = 76/621 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LD A+ +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIADRPAFLDCAFFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E I + G LEI A G Y CV ++ +G +
Sbjct: 483 LPSIEWFKGAKGSALR----EDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +I W +
Sbjct: 539 HLEIKDP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSD 591
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V+ G + N + V A L P+ +P+P Y+
Sbjct: 592 GRFTVDKDHLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYD 645
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSETL 340
P P + + +SW P + N+P + I + ++
Sbjct: 646 VP-----NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDVMHEAGLWHHQT 698
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A+N +G P SE +AE P P V
Sbjct: 699 EVPGTQTTAQLKLSP---YVNYAFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAV 753
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 754 EGLGSEPDNLVITWKPLSGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 809
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y VKV A N+ G PE + + P P V + +N T V W V
Sbjct: 810 GTPTFVPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 869
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ GY++ W+ +R + G+ + L P Y + V
Sbjct: 870 PLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVR 929
Query: 573 AFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 930 VVNGKGEGP-ASPDRAFHTPE 949
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVTEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGAIHHTISVTVKAAP-YWIIAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|380792623|gb|AFE68187.1| neurofascin isoform 3 precursor, partial [Macaca mulatta]
Length = 1086
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 244/534 (45%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + +Y G +
Sbjct: 631 ELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG---VWHDHSKYPGSVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + + NV + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G GPE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWN--RVYPDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R ++ ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P + GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGIMTGYTLK 964
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 134/629 (21%), Positives = 228/629 (36%), Gaps = 99/629 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKP 287
Y G + ++ L + E + +A EL + Y T +P
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKA----YLTVLGRP 624
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---- 343
P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 625 -DRPRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQF---EEDQFQPGVWHDHSKYP 678
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P V
Sbjct: 679 GSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPGDVKGE 733
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 734 GTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWNNVTVWGSRYVVGQT 787
Query: 461 PD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P Y ++V A N+ G+GPE E + + P+ P+ V ++ +N T + + W V P
Sbjct: 788 PVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISLQWNRVYP 847
Query: 520 SFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ + Y+ W V Q +A+ P G+ L + L P Y +
Sbjct: 848 DTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLRGVVSRLFPYSNYKLE 903
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 904 MVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|350588950|ref|XP_003482752.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Sus scrofa]
Length = 1211
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 263/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPSIEWFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 534 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------D 584
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
+EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 585 HSELPSDGRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 644
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 645 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGT 703
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 704 QT---------TAQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVE 754
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 755 GLGSEPDNLVITWKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 811
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y VKVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 812 PTF--VPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 869
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 870 PL--KSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 927
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S T P P S +K +NPT +T + PS +
Sbjct: 928 VRVVNGKGEGPASPDRAFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTE 984
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 985 YTLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEE 1043
Query: 586 AIT 588
A+T
Sbjct: 1044 AVT 1046
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 130/621 (20%), Positives = 228/621 (36%), Gaps = 76/621 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LD A+ +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIADRPAFLDCAFFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E I + G LEI A G Y CV ++ +G +
Sbjct: 483 LPSIEWFKGAKGSALR----EDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +I W +
Sbjct: 539 HLEIKDP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSD 591
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V+ G + N + V A L P+ +P+P Y+
Sbjct: 592 GRFTVDKDHLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYD 645
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSETL 340
P P + + +SW P + N+P + I + ++
Sbjct: 646 VP-----NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDVMHEAGLWHHQT 698
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A+N +G P SE +AE P P V
Sbjct: 699 EVPGTQTTAQLKLSP---YVNYAFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAV 753
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 754 EGLGSEPDNLVITWKPLSGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 809
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y VKV A N+ G PE + + P P V + +N T V W V
Sbjct: 810 GTPTFVPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 869
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ GY++ W+ +R + G+ + L P Y + V
Sbjct: 870 PLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVR 929
Query: 573 AFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 930 VVNGKGEGP-ASPDRAFHTPE 949
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVTEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGAIHHTISVTVKAAP-YWIIAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|47224417|emb|CAG08667.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1301
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 173/652 (26%), Positives = 279/652 (42%), Gaps = 67/652 (10%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGM 68
I C +P PK W KD G I +NG L + +SG Y+C A N G+
Sbjct: 455 IDCASFGSPIPKITWFKDSRSSTLDGHPYIIHDNGTLEMHTAQAHNSGKYTCVARNSLGI 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
E+ L V P+ + P + R++ C + L W + + + D
Sbjct: 515 YENHVYLEVKE-PTRILKQPEYKVVRRGRSVVFECKVKHDPTLIPTITWLKDAGELPDDD 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS----------TKTTVIVEG 178
I ++ L IT+ + DAG Y C+ +T+ + S T T +V
Sbjct: 574 ------ERIILESDSLTITDVTENDAGVYTCITNTTLDQDSASAELTVVEATPTPAVVYE 627
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + K S + WT G + PI + I + + W N++E V G +
Sbjct: 628 QPDPPTDLELTDQKKRSVQLTWTPGDEHNSPIQKFLIQFEDSLHHRGHWHNLTE-VPGTK 686
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ L P+ Y F+V+A N +G+ PS PS + T A P Q P+ + G
Sbjct: 687 TTAHLK---------LSPYVHYTFRVLALNAVGFSRPSFPSRMFKTEAAAPDQNPTGVQG 737
Query: 297 GGGKIGDLSISW----------EPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 345
G + +L ISW +PL + N P ++YK+ WR+K+ D+E+ S T+ N
Sbjct: 738 FGTEHNNLVISWKRTGTNELLSQPLSGLEANGPGLHYKVMWRQKDLDSEWTSVTVA--NN 795
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
V P+ + YE+KVQA+ND G GPE +V FS ED+P AP V + NST
Sbjct: 796 SKFIVSGTPT---FVPYELKVQAVNDYGAGPEPDVALGFSGEDLPVAAPDNVQAMVLNST 852
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA------LIVGL 459
V W+P+ + +RG L G ++ YW+E + ++ + N++ ++ GL
Sbjct: 853 VAEVHWDPVP--SKLLRGHLKGFKVYYWRERSLHRHNGHHTEKHILNFSGNHIRGVLPGL 910
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P + Y V YN GEGP S T P P S + + +N ++ + W P
Sbjct: 911 HPFSLYLFNVRVYNGRGEGPPSTTQQFETPEGVPGAPTSLL-VSSVNLDSLTLEWS--PP 967
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRAN-DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
I GY ++ V+ + + N + +L RY + N
Sbjct: 968 HIHNGHITGYTLKYQPVNNSNELGPVEELALAANETSVTLSNLKFSTRYKF----YLNAK 1023
Query: 579 DGRMSSPAITFQ----MGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAFS 626
R + PAIT + M E+ F P L + + + + + + V++S
Sbjct: 1024 TVRGAGPAITQEAVTIMDEDCLFDP-RPMLMAVFSLVCSALPANPFANVSYS 1074
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 152/661 (22%), Positives = 248/661 (37%), Gaps = 103/661 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYS 59
GE G +T C PKP W +G I + RK+ E+ ++ + V S +Y
Sbjct: 356 GESGVLT--CRASGTPKPSITWAMNGISIENAPADPSRKV-EDDTIIFTDVQTGSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--- 116
C +N +G S + VL PP++ A++ Q+ + L+D A
Sbjct: 413 CNVSNDYGYLLSNAFVNVL-------SEPPRVLTPANKVYQV--IKNQRALIDCASFGSP 463
Query: 117 -----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
W + R +D + P I D G LE+ A ++G+Y CV ++++G
Sbjct: 464 IPKITWFKDS-RSSTLDGH----PYIIHDNGTLEMHTAQAHNSGKYTCVARNSLGIYENH 518
Query: 172 TTVIVEGPPGLPG---------GVQVVEVHKTS------ATIQWTDGATNGRPITHYKII 216
+ V+ P + G VV K TI W A P +II
Sbjct: 519 VYLEVKEPTRILKQPEYKVVRRGRSVVFECKVKHDPTLIPTITWLKDAGE-LPDDDERII 577
Query: 217 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
++ + T +V+E+ G YT +++ ++ E V+ +P
Sbjct: 578 LESD-SLTITDVTENDAGV----YTCITNTTLDQ---DSASAELTVVEAT-------PTP 622
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
+ Y P P+ + K + ++W P ++ N+P + I +
Sbjct: 623 AVVYEQP-----DPPTDLELTDQKKRSVQLTWT--PGDEHNSPIQKFLIQFEDSLHHRGH 675
Query: 337 SETLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAP 394
L E G A +++ Y Y +V A+N VG S +F E P P
Sbjct: 676 WHNLTEVPGTKTTAHLKLSP---YVHYTFRVLALNAVGFSRPSFPSRMFKTEAAAPDQNP 732
Query: 395 QGVFSRGFNSTAINVTWNPI---ELIRENIRGRL-----IGHRIKYWKED-NPEETAVYY 445
GV G + ++W EL+ + + G + +++ + ++D + E T+V
Sbjct: 733 TGVQGFGTEHNNLVISWKRTGTNELLSQPLSGLEANGPGLHYKVMWRQKDLDSEWTSV-- 790
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
N IV P Y +KV A N+ G GPE + L + P P V
Sbjct: 791 --TVANNSKFIVSGTPTFVPYELKVQAVNDYGAGPEPDVALGFSGEDLPVAAPDNVQAMV 848
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADI 558
+N T V W V + G+KV W ++ + R N + GN + +
Sbjct: 849 LNSTVAEVHWDPVPSKLLRGHLKGFKVYYWR-ERSLHRHNGHHTEKHILNFSGNHIRGVL 907
Query: 559 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSST 618
L P Y V ++ G+G P T Q E E G+P T LLV S
Sbjct: 908 PGLHPFSLYLFNVRVYNGRGEG----PPSTTQQFETPEGVPGAP-------TSLLVSSVN 956
Query: 619 L 619
L
Sbjct: 957 L 957
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCT 61
G + + C E P P+ W K G++ +R F++ L I VS D+G Y C
Sbjct: 265 GHVLEMECIAEGLPTPEISWSKVSGDL---PAKRTSFQHYQKTLRIVNVSESDAGEYRCL 321
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + V P + + +A + L C A + W NG
Sbjct: 322 ARNQLGSVHHTILVTVKAAPYWLSGPSQNLVLAPGESGVLTCRASGTPKPSIT--WAMNG 379
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGP 179
+ I N + P+ ++ + T+ + Y+C V + G + + V+ E P
Sbjct: 380 ISIENAPAD----PSRKVEDDTIIFTDVQTGSSAVYQCNVSNDYGYLLSNAFVNVLSEPP 435
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
L +V +V K + D A+ G PI
Sbjct: 436 RVLTPANKVYQVIKNQRAL--IDCASFGSPI 464
>gi|350588952|ref|XP_003482753.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Sus scrofa]
Length = 1180
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 263/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPSIEWFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
+EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 566 HSELPSDGRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 626 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGT 684
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 685 QT---------TAQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y VKVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 908
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S T P P S +K +NPT +T + PS +
Sbjct: 909 VRVVNGKGEGPASPDRAFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTE 965
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 YTLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEE 1024
Query: 586 AIT 588
A+T
Sbjct: 1025 AVT 1027
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 130/621 (20%), Positives = 228/621 (36%), Gaps = 76/621 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIADRPAFLDCAFFGSP 463
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E I + G LEI A G Y CV ++ +G +
Sbjct: 464 LPSIEWFKGAKGSALR----EDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +I W +
Sbjct: 520 HLEIKDP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSD 572
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V+ G + N + V A L P+ +P+P Y+
Sbjct: 573 GRFTVDKDHLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYD 626
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSETL 340
P P + + +SW P + N+P + I + ++
Sbjct: 627 VP-----NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDVMHEAGLWHHQT 679
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A+N +G P SE +AE P P V
Sbjct: 680 EVPGTQTTAQLKLSP---YVNYAFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAV 734
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 735 EGLGSEPDNLVITWKPLSGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 790
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y VKV A N+ G PE + + P P V + +N T V W V
Sbjct: 791 GTPTFVPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 850
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ GY++ W+ +R + G+ + L P Y + V
Sbjct: 851 PLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVR 910
Query: 573 AFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 911 VVNGKGEGP-ASPDRAFHTPE 930
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVTEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NTLGAIHHTISVTVKAAP-YWIIAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|1708635|gb|AAC47451.1| neuroglian [Manduca sexta]
Length = 1264
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 261/584 (44%), Gaps = 33/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + C APKP W +D ++ +GG+ I G+L+I VS D G Y C A
Sbjct: 440 DGSEAVLKCRVFGAPKPIVKWMRD-DVDITGGKYNITSEGDLVIRDVSFTDVGTYQCYAK 498
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + G L V ++ P +AA + RC+A+ ++ L + +W ++G
Sbjct: 499 NKFGEKSAFGSLAVKKRTVITDK-PEDYEVAAGSSATFRCNANADDSLKLTIVWLNDGQL 557
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D + D LL I++ + D+G+Y C+ K+ + + + T+ V+ P P
Sbjct: 558 I---DFENQPRFRMTNDYSLL-ISDTTELDSGQYTCIAKTAIDEARAQATLTVQDKPN-P 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ VE +AT++W N P+ Y+I T++ +W ++HV +
Sbjct: 613 PALDGVECGAATATLRWRSMGDNRAPVVRYQIHYNTSFTPDSWAAAADHVPAIDT----- 667
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
S L PW+ Y F+VIA N++G PSS S T D PY+ P + G G
Sbjct: 668 ----SWTVQLSPWANYTFRVIAVNKIGPSSPSSHSDVCTTQPDVPYKNPDNVKGEGSDPT 723
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
++ ISW +P+ + N P YY + WR+ E+ E ++++ V P+ +
Sbjct: 724 NMVISWSKMPQIEHNGPGFYYLVSWRRNITGDEWNKEQVRDWQQTEYIVTNTPT---FQP 780
Query: 362 YEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIRE 419
Y++KV A+N G + V I +S ED P AP + T ++WN + E
Sbjct: 781 YKIKVTAVNFKGTSNVTPVEVIGWSGEDTPLQAPANFTLVQVTTGTTALLSWNAV--APE 838
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W D E+ L + AL+ +P K +++ YN GP
Sbjct: 839 SVRGHFKGYKIQTWT-DGEEDRLKEILVKADSTSALVTKFKPFKKNNARILVYNGRFNGP 897
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEPIIGYKVRVWEVD- 537
S+ T P+ P V G+ P + + ++ P E + GYK+ +V
Sbjct: 898 PSDILSFET----PEGKPGTVRTFGVYPIGSSAMLLKWEKPVDENGVLTGYKIYYQKVTG 953
Query: 538 QDMSRANDTIIPVGNTLD-ADIVDLSPGKRYHMRVLAFSNGGDG 580
+ + + D A + L P +Y + + A + G+G
Sbjct: 954 TSLGPLQERKKEIDPKFDRAKLAGLEPNTKYRIIIRAKTKAGEG 997
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 7/180 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V ++C P P+ VWKKDG NII S + L+I + +DSG Y+C
Sbjct: 253 ALKGKKVELYCIYGGTPLPQIVWKKDGHNIIPSASITQDNYGKTLVIKYPNYEDSGTYTC 312
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G S + + ++ P +A +RC A + + W HN
Sbjct: 313 EVSNGVGTALSYSIQLNIEAAPFFTVEPDVQNLAEGETAVIRCEAGGTPVPKIT--WIHN 370
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G I + N P + + IT+ D G Y C S++G + + V+ P
Sbjct: 371 GKPIEQAEPN----PRRQVTANSIVITDLVKKDTGNYGCNATSSIGYVYKDVYINVQSIP 426
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 46/309 (14%)
Query: 285 DKPYQAPSRIGGGGGKIGDLSI-SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
D P QAP+ G ++ SW + E YKI + T+ + + LKE
Sbjct: 808 DTPLQAPANFTLVQVTTGTTALLSWNAVAPESVRGHFKGYKI----QTWTDGEEDRLKEI 863
Query: 344 GNVGIAVVRIPSEFY-YTEYEVKVQAINDVGPGPESEVVTIFSAEDMP-QVAPQGVFSRG 401
+ + ++F + + ++ N GP S++++ + E P V GV+ G
Sbjct: 864 LVKADSTSALVTKFKPFKKNNARILVYNGRFNGPPSDILSFETPEGKPGTVRTFGVYPIG 923
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR------NWAL 455
S+A+ + W + + EN G L G++I Y K T++ L + + A
Sbjct: 924 --SSAMLLKWE--KPVDEN--GVLTGYKIYYQKVTG---TSLGPLQERKKEIDPKFDRAK 974
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKA----PQKPPSAVHIKGINPTTVH 511
+ GL+P+TKY + + A AGEG E Y+E+T + A P+ P T H
Sbjct: 975 LAGLEPNTKYRIIIRAKTKAGEG--DEYYVEQTTKSAVTAKPEIPLFETRTLSAKEGTAH 1032
Query: 512 VTWRYVSPSFEEEP----IIGYKVR---VWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564
+ R++ PS + + YK++ W D++ +D +I G L PG
Sbjct: 1033 ILVRWI-PSLDGHAGSHFVAWYKLKGMPDWLKTNDITD-DDYVILTG---------LEPG 1081
Query: 565 KRYHMRVLA 573
+ Y ++V A
Sbjct: 1082 QVYEVKVTA 1090
>gi|350588946|ref|XP_003482750.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Sus scrofa]
Length = 1192
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 263/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPSIEWFKGAK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W D
Sbjct: 515 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLILTVTWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
+EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 566 HSELPSDGRFTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 626 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGT 684
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 685 QT---------TAQLKLSPYVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLSGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y VKVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 908
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S T P P S +K +NPT +T + PS +
Sbjct: 909 VRVVNGKGEGPASPDRAFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTE 965
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 YTLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEE 1024
Query: 586 AIT 588
A+T
Sbjct: 1025 AVT 1027
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 130/621 (20%), Positives = 228/621 (36%), Gaps = 76/621 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSSVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LD A+ +
Sbjct: 413 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIADRPAFLDCAFFGSP 463
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E I + G LEI A G Y CV ++ +G +
Sbjct: 464 LPSIEWFKGAKGSALR----EDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +I W +
Sbjct: 520 HLEIKDP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLILTVTWLKDHSELPSD 572
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V+ G + N + V A L P+ +P+P Y+
Sbjct: 573 GRFTVDKDHLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYD 626
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSETL 340
P P + + +SW P + N+P + I + ++
Sbjct: 627 VP-----NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDVMHEAGLWHHQT 679
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A+N +G P SE +AE P P V
Sbjct: 680 EVPGTQTTAQLKLSP---YVNYAFRVMAVNSLGRSLPSEASEQYLTKAAE--PDKNPTAV 734
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 735 EGLGSEPDNLVITWKPLSGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 790
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y VKV A N+ G PE + + P P V + +N T V W V
Sbjct: 791 GTPTFVPYLVKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPV 850
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ GY++ W+ +R + G+ + L P Y + V
Sbjct: 851 PLKSIRGHLQGYRIYYWKAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVR 910
Query: 573 AFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 911 VVNGKGEGP-ASPDRAFHTPE 930
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVTEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NTLGAIHHTISVTVKAAP-YWIIAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSNVQERSSSVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|326911404|ref|XP_003202049.1| PREDICTED: neuronal cell adhesion molecule-like [Meleagris gallopavo]
Length = 1326
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 248/555 (44%), Gaps = 52/555 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G I C +PKP+ W K G+I+ G +NG L I +D +G Y+C A
Sbjct: 685 GSPALIDCAYFGSPKPEIEWFKGVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVA 743
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G +++ +L V P+ + P I + C + L IW
Sbjct: 744 RNKLGKTQNEVQLEV-KDPTMIIKQPEYKVIQRSAQVSFECVIKHDPTLIPTVIWLK--- 799
Query: 123 RIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTK---------- 171
D NEL + G L I N + D G Y C+V +T+ +S
Sbjct: 800 -----DNNELPDDERFLVGKENLTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPP 854
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVS 229
T I+ P P +++ + S + W G N PIT++ I + W +
Sbjct: 855 TPAIIYARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQT 914
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
E V G + +++ L P+ Y F+VIA NE+G +PS PS QY T + P +
Sbjct: 915 E-VPGSQ---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDE 964
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGI 348
PS + G G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV
Sbjct: 965 NPSNVQGIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSK 1021
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+V F YE+KVQA+ND+G PE V S ED+P VAP V NST
Sbjct: 1022 YIVSGTPTF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAK 1079
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPD 462
V W+P+ L +++RG L G+++ YWK + + ++ R + + ++ GL+P
Sbjct: 1080 VHWDPVPL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPF 1137
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ Y + V N GEGP S + +T P P +K NPT +T + SP+
Sbjct: 1138 SSYKLNVRVVNGKGEGPASPDKMFKTPEGVPSSP---SFLKITNPTLDSLTLEWGSPTHP 1194
Query: 523 EEPIIGYKVRVWEVD 537
+ Y ++ ++
Sbjct: 1195 NGVLTSYILKFQPIN 1209
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 145/649 (22%), Positives = 246/649 (37%), Gaps = 97/649 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIY 58
GE G T+ C PKP W +G I RR + ++ S V S +Y
Sbjct: 591 GEDG--TLICRANGNPKPSISWLTNGVPIAIAPEDPSRR--VDGDTIIFSAVQERSSAVY 646
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL PP+I A++ Q+ A + L+D AY +
Sbjct: 647 QCNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IAGSPALIDCAYFGS 697
Query: 119 -------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
GV+ + NE + D G LEI A G Y CV ++ +GK +
Sbjct: 698 PKPEIEWFKGVKGSILRGNEY----VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNE 753
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSA---------------TIQWTDGATNGRPITHYKII 216
+ V+ P + + + +++ T+ W N P ++
Sbjct: 754 VQLEVKDPTMIIKQPEYKVIQRSAQVSFECVIKHDPTLIPTVIWLKD-NNELPDDERFLV 812
Query: 217 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
+ N T NV++ K+ YT ++++V ++ V+A P +P
Sbjct: 813 GKENL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTP 856
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKND 332
+ Y P P + G + +SW +P E+ N+P I Y+ +
Sbjct: 857 AIIYARP-----NPPLDLELTGQLERSIELSW--VPGEENNSPITNFVIEYEDGLHEPGV 909
Query: 333 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDM 389
+Q+E V + + Y Y +V A+N++G P SE SA
Sbjct: 910 WHYQTEVPGSQTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN-- 961
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P P V G + +TW ++ + N G + +++ + ++D +E ++
Sbjct: 962 PDENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVVVANV 1019
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
++ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 1020 SK--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTL 1077
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSP 563
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 1078 AKVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEP 1136
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLL 612
Y + V + G+G PA +M + E SP+ + L
Sbjct: 1137 FSSYKLNVRVVNGKGEG----PASPDKMFKTPEGVPSSPSFLKITNPTL 1181
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 126/561 (22%), Positives = 207/561 (36%), Gaps = 80/561 (14%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y C A
Sbjct: 501 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCIA 558
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N+ G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 559 RNILGSTHHVISVTVKASP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 615
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 616 PIAIAP----EDPSRRVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 671
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 672 ILTPANKLYQVIAGSPAL--IDCAYFGSPKPEIE----------WFKGVKGSILRG-NEY 718
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYG------EPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A N+LG E P+ P K Q ++
Sbjct: 719 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPEYKVIQRSAQ 778
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+S+E + + P + + W K N+ E + G + ++ +
Sbjct: 779 ------------VSFECVIKHD---PTLIPTVIWLKDNN-ELPDDERFLVGKENLTIMNV 822
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 823 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSI 879
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL------SRTTRNWALIVGLQP 461
++W P E I +I + ED E V++ S+TT + + L P
Sbjct: 880 ELSWVPGEENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGSQTT----VQLKLSP 929
Query: 462 DTKYYVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y +V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 930 YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLK 987
Query: 519 PSFEEEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 988 GFQSNGPGLQYKVSWRQKDVD 1008
>gi|357609885|gb|EHJ66734.1| neuroglian [Danaus plexippus]
Length = 1273
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 266/587 (45%), Gaps = 41/587 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + C AP+P W +D +I +GG+ I + G+L+I+ VS D G Y C A N
Sbjct: 447 GSTAALRCRVFGAPRPIVRWMRD-DIDVTGGKYNITKEGDLVIADVSFTDVGTYQCYAKN 505
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + G L V ++ P +AA + RC+A+ ++ L + IW ++G I
Sbjct: 506 KFGEKSAFGSLTVKKRTVITDK-PEPYEVAAGSSATFRCNANADDSLKLDIIWLNDGQPI 564
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
D + I D LL I++ S D+GEY C+ K+ + + + T+ V+ P P
Sbjct: 565 ---DFDNQPRFRITNDYSLL-ISDTSELDSGEYTCIAKTAIDEARAQATLTVQDKPN-PP 619
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGR 243
++ +E H+ +AT++W N PI Y I T++ W S++V +
Sbjct: 620 ALEGIECHERTATLRWHSMGDNRAPILRYSIQYNTSFTPHAWDLASDNVPAIDT------ 673
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
S L PW+ Y F+V A N++G PSS S T D PY+ P + G G +
Sbjct: 674 ---SWTVQLSPWANYTFRVTASNKIGASAPSSHSDVCTTQPDVPYKNPDNVEGKGTDPTN 730
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ I+W +P+ + N P YY + W++ + + E ++++ + P+ + Y
Sbjct: 731 MVITWSKMPQIEHNGPGFYYLVSWKRNISGAAWSEEQVRDWATTEYVIPNTPT---FKPY 787
Query: 363 EVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
++KV A+N G + V I +S ED P AP + T ++WNP+ E+
Sbjct: 788 KIKVIAVNSKGTSNVAPVEVIGWSGEDTPLQAPTNFTLVQVTTGTTALLSWNPVPA--ES 845
Query: 421 IRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+RG G++I+ W +ED P+E + + +T L+ +P K +++ YN
Sbjct: 846 VRGHFKGYKIQTWIDGEEDRPKEILIKADASST----LVTKFKPFKKNNARILVYNGRFN 901
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP SE ++ KP + + + + ++ P E + GYK+ +V
Sbjct: 902 GPPSETL---SFNTPEGKPGTVRSFEAYPIGSSAMLLKWDKPLDENGILTGYKIYYQKVT 958
Query: 538 QD----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ I P + A + L P +Y + + A + G+G
Sbjct: 959 GTALGPLQERKKEIDPKFDR--AKLAGLEPNTKYRIEIRAKTKAGEG 1003
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 7/180 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN-LLISPVSRDDSGIYSC 60
A G V ++C P P+ VWKK+G I S R G L+I +D G Y+C
Sbjct: 259 AWRGKKVELYCIYGGTPLPQVVWKKEGRTIISSQRITQDNYGKTLVIKRAGYEDQGTYTC 318
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G E+ + + ++ + P +A ++C A ++ W HN
Sbjct: 319 EVSNGVGTAETYSIQLNVEAAPFFIEEPQFQNLAEGETAVIQCRAGGTPEPTIS--WVHN 376
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G I + N P + + IT+ D G Y C ++ G + + V+ P
Sbjct: 377 GKPIEQAENN----PRRQVTANSITITDLVKKDTGNYGCNATNSNGYVYKDVFINVQSIP 432
>gi|432862638|ref|XP_004069954.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
Length = 1176
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 266/587 (45%), Gaps = 42/587 (7%)
Query: 12 CNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70
C+ +P P W KD + G + +NG L I DSG Y+C A N+ G+ E
Sbjct: 461 CSFFGSPIPNITWFKDSRSSTLDGDSYALHDNGTLEIRISRPRDSGKYTCVARNILGIFE 520
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130
+ L V P+++ + P I R++ C + L W + + + D
Sbjct: 521 NHVFLEVKE-PTHFLKQPEYQVIKRGRSVTFECKVKHDSSLTATMTWLKDDEELPDDD-- 577
Query: 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
+ L ITN +DAG Y C++ +T+ +S + V P P +++ +
Sbjct: 578 -----RFVVGAESLTITNVVDSDAGMYTCIMNTTLDHVSASAELTVVERPDPPTDLELTD 632
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASI 248
K S + W G I ++ I + + W N++ HV G + +
Sbjct: 633 QTKRSVVLTWIPGNEYNSHIKNFLIQYEDSLHHRGHWHNLT-HVPGTKTSAHLK------ 685
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
L P Y F+V+A N++G+ +PS+PS Y T P + P+ + G G + +L ISW
Sbjct: 686 ---LSPHVHYTFRVLALNDVGWSQPSNPSQMYKTDPAAPDENPTGVQGLGTEPNNLIISW 742
Query: 309 EPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
+PL + + N P ++YK+ +R KK +E+ + + N VV S F YE+KVQ
Sbjct: 743 KPLTKLQSNGPGLHYKVMYREKKPGSEWITTNV---ANNSRFVVSGTSTF--APYELKVQ 797
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A+N+ G GPE VV +S ED+P+ AP G+ + NST V W + ++IRG L G
Sbjct: 798 AVNNYGEGPEPAVVIGYSGEDVPKSAPTGLRTVVRNSTMAEVGWKTVS--DDSIRGFLKG 855
Query: 428 HRIKYWKEDNPEETAVYYLSRT-----TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
+++ YW++ + ++ + R+ ++ GL P + Y V +N GEGP S
Sbjct: 856 YKVHYWRDHGVHRHHLDHVEKILTFSGNRSHGILPGLHPFSDYSFYVKVFNGRGEGPPSI 915
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542
RT P PP+++ + NP +T ++ P I GY ++ V+
Sbjct: 916 TKHFRTPEGVP-GPPTSLVVS--NPNLDSLTLKWSPPYDPNGHITGYTLKYQPVNNSNEL 972
Query: 543 ANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ ++ + N + +L RY + A + G G PAIT
Sbjct: 973 GEEEVLALAANETSVTLPNLQYSTRYRFYLNAKTKIGAG----PAIT 1015
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 20/270 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C E P P+ W KDG+++ +G + N L I VS + G+Y CTATN
Sbjct: 269 GHKLDMECIAEGRPTPEISWTKDGSVLPAGRTSFLQFNKTLQIDDVSDSEEGVYRCTATN 328
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P + P + ++ N L C A + + WT N + I
Sbjct: 329 KFGSVHHTFHVTVKAAPYWISGPPSNLVLSPGENGMLTCRASGKPKPLIR--WTKNVMPI 386
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
LE + ++ ++ + +++ Y+C V + G + V ++ PP +
Sbjct: 387 E----TGLEDDTMKVEDDMIIFRDVKTSNSAVYQCNVSNEFGYLLANAFVNVLSEPPRV- 441
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ V+K I+ N R + N TWF S + D Y
Sbjct: 442 ----LTPVNKKYEVIR------NHRAMLDCSFFGSPIPNITWFKDSRSST-LDGDSYALH 490
Query: 244 KEASIE-NVLVPWSTYEFKVIAGNELGYGE 272
++E + P + ++ +A N LG E
Sbjct: 491 DNGTLEIRISRPRDSGKYTCVARNILGIFE 520
>gi|348568089|ref|XP_003469831.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Cavia
porcellus]
Length = 1256
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 258/593 (43%), Gaps = 55/593 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ +D G Y CV +T+ ++S + V P
Sbjct: 587 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYD 639
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 640 VPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE------ 693
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 694 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 749
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 750 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 806
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+N +G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 807 TF--VPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 864
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRGRL G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 865 L--KSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 922
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 923 RVVNGKGEGPASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 979
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 980 TLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPG 1031
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 426 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 479
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + + D+ + + G LEI A ++G Y CV ++ +G +
Sbjct: 480 IEWFKGAKGSAL-HEDIYVIH------ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 532
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 533 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 585
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + +V A L P+ +P+P Y+
Sbjct: 586 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVAPTPTPAPIYD 639
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P+ P + + +SW P + N+P + I + ++
Sbjct: 640 VPS-----PPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQA 692
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 693 EVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAV 747
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 748 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 803
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N G PE + P P V + +N T V W V
Sbjct: 804 GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 863
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 864 PLKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 922
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 923 RVVNGKGEGP-ASPDRAFSTPE 943
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 394
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 395 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 426
>gi|345498258|ref|XP_003428190.1| PREDICTED: neuroglian-like isoform 2 [Nasonia vitripennis]
Length = 1248
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 272/592 (45%), Gaps = 45/592 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C APKP+ W ++G + +GGR KI E+G+L I V D+G Y+C A+
Sbjct: 439 DGKTIRLTCRVFGAPKPEVKWVRNGQEL-TGGRYKILESGDLEIENVIFSDAGEYNCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + G L V + +P +AA RC+A T+ L++ W G
Sbjct: 498 NKFGKVNATGFLAVKEH-TRITDVPEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E E I L IT + D+G Y CV ++ + + + T+IV+ P P
Sbjct: 557 I---DF-EAEPRFIRSTDYSLMITKTTELDSGTYTCVARTDLDEARAQATLIVQDVPNSP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ V A + WT N PI Y I T++ TW +HV E RY
Sbjct: 613 T-LLGVSCTSNQAFVSWTPMGDNRSPILRYAIQYNTSFTPDTWEYAKDHVPATE-QRYAV 670
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
+ + PW+ Y F+VIA N++G +PS S T D PY P + G G
Sbjct: 671 Q--------MSPWANYTFRVIAYNKIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDPQ 722
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L ISW +P+ + NAP Y++++++ D + ++E N + I ++ Y +Y
Sbjct: 723 NLVISWTVMPQIEHNAPKFKYQVYYKR--DIPGEDWRIEEITNWKQNTLVINNQPTYQKY 780
Query: 363 EVKVQAINDVGPG--PESEVVTIFSAEDMPQVAPQGVFS--RGFNSTAINVTWNPIELIR 418
++KV A+N+ G P EV+ +S ED+P +P G F+ +ST ++W P+
Sbjct: 781 KIKVGALNEKGECREPPQEVIG-YSGEDVPTASP-GNFTLVEVRSSTTALLSWTPV--AE 836
Query: 419 ENIRGRLIGHRIKYW--KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
E ++G L G++I+ W K+ P + + + +AL+ P +K +V++ AYN
Sbjct: 837 ETVKGELRGYKIETWTDKDGEPNNPREHNVKGGNKTYALVTKFIPFSKNFVRIRAYNGRF 896
Query: 477 EGPESERYLERTYRKAPQKPPSAV---HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
GP SE T P+ P V + T++ + W+ P + GY++
Sbjct: 897 NGPPSEVLSFET----PEGVPGTVMGLEAYPVGSTSMLLKWK--KPIEINGILTGYRISF 950
Query: 534 WEVD-----QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+V+ +M R P + A + L P +Y + V A + G G
Sbjct: 951 QQVNGSKIGNEMERHPQITDPEATS--AKLASLMPEAKYRISVRATTGAGPG 1000
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P VW K+G I R G +L+I V+ DD G Y+C
Sbjct: 252 ALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEGTYTC 311
Query: 61 TATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
+N G +S L VL P Y+ P + A ++ +C A ++ W H
Sbjct: 312 DVSNGVGSAQSYSINLEVLSVP-YFTVEPEIVNAAEDETVEFKCEATGVPKPEIK--WIH 368
Query: 120 NGVRIGNMDLNELE--TPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG I N TPN I LL+ D G Y C +++G +
Sbjct: 369 NGKPISEAPFNPRRKVTPNSIIIEKLLK------NDTGNYGCNATNSLGYV 413
>gi|348568093|ref|XP_003469833.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Cavia
porcellus]
Length = 1180
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 258/593 (43%), Gaps = 55/593 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 515 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ +D G Y CV +T+ ++S + V P
Sbjct: 574 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+N +G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRGRL G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 967 TLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPG 1018
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 413 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 466
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + + D+ + + G LEI A ++G Y CV ++ +G +
Sbjct: 467 IEWFKGAKGSAL-HEDIYVIH------ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 520 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 572
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + +V A L P+ +P+P Y+
Sbjct: 573 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVAPTPTPAPIYD 626
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P+ P + + +SW P + N+P + I + ++
Sbjct: 627 VPS-----PPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQA 679
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 680 EVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAV 734
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 735 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 790
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N G PE + P P V + +N T V W V
Sbjct: 791 GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 850
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 851 PLKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 910 RVVNGKGEGP-ASPDRAFSTPE 930
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 381
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 382 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 413
>gi|156546343|ref|XP_001606583.1| PREDICTED: neuroglian-like isoform 1 [Nasonia vitripennis]
Length = 1254
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 272/592 (45%), Gaps = 45/592 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C APKP+ W ++G + +GGR KI E+G+L I V D+G Y+C A+
Sbjct: 439 DGKTIRLTCRVFGAPKPEVKWVRNGQEL-TGGRYKILESGDLEIENVIFSDAGEYNCHAS 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + G L V + +P +AA RC+A T+ L++ W G
Sbjct: 498 NKFGKVNATGFLAVKEH-TRITDVPEDYEVAAGATATFRCNAVTDSTLELHIDWLSKGEP 556
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E E I L IT + D+G Y CV ++ + + + T+IV+ P P
Sbjct: 557 I---DF-EAEPRFIRSTDYSLMITKTTELDSGTYTCVARTDLDEARAQATLIVQDVPNSP 612
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ V A + WT N PI Y I T++ TW +HV E RY
Sbjct: 613 T-LLGVSCTSNQAFVSWTPMGDNRSPILRYAIQYNTSFTPDTWEYAKDHVPATE-QRYAV 670
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
+ + PW+ Y F+VIA N++G +PS S T D PY P + G G
Sbjct: 671 Q--------MSPWANYTFRVIAYNKIGPSQPSQHSHVCTTLPDVPYNNPDNVMGRGDDPQ 722
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L ISW +P+ + NAP Y++++++ D + ++E N + I ++ Y +Y
Sbjct: 723 NLVISWTVMPQIEHNAPKFKYQVYYKR--DIPGEDWRIEEITNWKQNTLVINNQPTYQKY 780
Query: 363 EVKVQAINDVGPG--PESEVVTIFSAEDMPQVAPQGVFS--RGFNSTAINVTWNPIELIR 418
++KV A+N+ G P EV+ +S ED+P +P G F+ +ST ++W P+
Sbjct: 781 KIKVGALNEKGECREPPQEVIG-YSGEDVPTASP-GNFTLVEVRSSTTALLSWTPV--AE 836
Query: 419 ENIRGRLIGHRIKYW--KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
E ++G L G++I+ W K+ P + + + +AL+ P +K +V++ AYN
Sbjct: 837 ETVKGELRGYKIETWTDKDGEPNNPREHNVKGGNKTYALVTKFIPFSKNFVRIRAYNGRF 896
Query: 477 EGPESERYLERTYRKAPQKPPSAV---HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
GP SE T P+ P V + T++ + W+ P + GY++
Sbjct: 897 NGPPSEVLSFET----PEGVPGTVMGLEAYPVGSTSMLLKWK--KPIEINGILTGYRISF 950
Query: 534 WEVD-----QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+V+ +M R P + A + L P +Y + V A + G G
Sbjct: 951 QQVNGSKIGNEMERHPQITDPEATS--AKLASLMPEAKYRISVRATTGAGPG 1000
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P VW K+G I R G +L+I V+ DD G Y+C
Sbjct: 252 ALRGKKIELFCIFGGTPLPLTVWSKNGQRIRPNDRVTEGNYGKSLIIKHVNFDDEGTYTC 311
Query: 61 TATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
+N G +S L VL P Y+ P + A ++ +C A ++ W H
Sbjct: 312 DVSNGVGSAQSYSINLEVLSVP-YFTVEPEIVNAAEDETVEFKCEATGVPKPEIK--WIH 368
Query: 120 NGVRIGNMDLNELE--TPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NG I N TPN I LL+ D G Y C +++G +
Sbjct: 369 NGKPISEAPFNPRRKVTPNSIIIEKLLK------NDTGNYGCNATNSLGYV 413
>gi|348568087|ref|XP_003469830.1| PREDICTED: neuronal cell adhesion molecule isoform 2 [Cavia
porcellus]
Length = 1304
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 258/593 (43%), Gaps = 55/593 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 534 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ +D G Y CV +T+ ++S + V P
Sbjct: 593 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+N +G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRGRL G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 986 TLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPG 1037
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 432 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 485
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + + D+ + + G LEI A ++G Y CV ++ +G +
Sbjct: 486 IEWFKGAKGSAL-HEDIYVIH------ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 539 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 591
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + +V A L P+ +P+P Y+
Sbjct: 592 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVAPTPTPAPIYD 645
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P+ P + + +SW P + N+P + I + ++
Sbjct: 646 VPS-----PPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQA 698
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 699 EVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAV 753
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 754 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 809
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N G PE + P P V + +N T V W V
Sbjct: 810 GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 869
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 870 PLKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 929 RVVNGKGEGP-ASPDRAFSTPE 949
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 400
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 401 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 432
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 122/327 (37%), Gaps = 65/327 (19%)
Query: 183 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
PG V+V V+ T A + W G G I ++K + + N + K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGRLQGYRIYYWKAQSASQRN-------RRHLEK 901
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ + G K + L P+S Y V N G G P+SP ++TP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYALNVRVVNGKGEG-PASPDRAFSTPEGVP-SAPSSLK 959
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+ L++ W+P R N Y + ++ N T E G + ++IP+
Sbjct: 960 IVNPTLDSLTLEWDPPSRP--NGILTEYTLKYQPINSTH-------ELG--PLIDLKIPA 1008
Query: 356 EF---------YYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ T Y+ A VGPG E V T+ A +P G + N
Sbjct: 1009 NKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEGVTTVDEAGILPPDVGAGKV-QAVN 1067
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY--------------LSRT 449
N+T E NI WK + PE Y +
Sbjct: 1068 PRISNLTAAAAE-TSANIS----------WKYEGPEHVNFYVEYGVAGSKEEWRKEIVNG 1116
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAG 476
+R++ + GL P T Y V+V A ++G
Sbjct: 1117 SRSFFGLKGLMPGTAYKVRVGAEGHSG 1143
>gi|317418926|emb|CBN80964.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus labrax]
Length = 1247
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/598 (26%), Positives = 268/598 (44%), Gaps = 41/598 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG V + C ++P W KD + G R + +NG+L I V + D+G Y+C
Sbjct: 439 AVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTC 498
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 118
A N G + ++ + P+ P + I QL C A +E D+ +W
Sbjct: 499 LAKNTEG-SSAIDTMLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWE 557
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ + I LN E ++ G+L+I N S D G Y CV ++ V + + +IV
Sbjct: 558 KDDMEIA---LNYTENSRYFVEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLD 614
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKE 236
P P + + E S ++W G + T + I + W W KE
Sbjct: 615 VPDAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEPGNW---------KE 665
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G +++ L Y F+V N +G G S P+ +Y PA P + P I
Sbjct: 666 LLRVPGNHNSAVLK-LHGNVDYCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKI 724
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G ++ I+WEPL + N P + YK+ +R+++ + ++Q +K + V V P+
Sbjct: 725 EGHLAHEMDINWEPLLPIEHNGPGLEYKVSYRRQDLEEDWQEHMVKRHSFV---VKNTPT 781
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ YE+K+QA N+ G GP+ ++VT +S ED P AP V NS+ + V+W +
Sbjct: 782 ---FVPYEIKIQAKNNQGWGPDPKIVTGYSGEDFPSAAPDDVAVEVMNSSVVKVSWTRVH 838
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKV 469
++ + G L G+RI +W+ + ++ + + T RN A + GL P ++Y + V
Sbjct: 839 --KDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHTLTIPGDRNHAAVPGLTPFSEYSLIV 896
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII-G 528
M +N G GP S +T P+K P + + TV + W +P E I+ G
Sbjct: 897 MTFNGRGNGPGSHPVNFKTPEGVPEKNP-VFRVTDVQKHTVSLVW---APPLEPNGILTG 952
Query: 529 YKVRVWEVDQDMSRANDTIIPVGN--TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
Y + ++ + + N T + DL P +Y + + + + G G + S
Sbjct: 953 YLLEYQLINDTEEVGPLQTVDISNPDTTKWTLRDLEPVSKYKLYLRSCTTVGCGLVVS 1010
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 134/620 (21%), Positives = 242/620 (39%), Gaps = 82/620 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V I C+ P+P W+ +G + RK+ + +L+ DS +Y C A
Sbjct: 349 GSDVLIKCSASGTPQPTITWRVNGVPLQEAPAANRKVLGD-TILLRNAKASDSAVYQCEA 407
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
+N H S +++++ LPP I + + + + C + V
Sbjct: 408 SNRHRTLLSNANIMIMN-------LPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVT 460
Query: 115 YIWTHNGVRIGNMDLNE-LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W+ + D +E +E P + D G LEI + D G+Y C+ K+T G + T
Sbjct: 461 --WSKD-------DSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDT 511
Query: 173 TVIVEGPPGL---PGGVQVV--EVHKTSATIQWTDGATNGRPITHYK----IIARTNWNS 223
+ V+ P + P +Q++ + S ++ + N + K I NS
Sbjct: 512 MLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIALNYTENS 571
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+F V + ++ I NV W + +A + S+ + P
Sbjct: 572 RYF-VEDGIL-------------QIINV-SHWDQGVYTCVARTPVDQDTASAWLIVLDVP 616
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI---YYKIFWRKKNDTEFQSETL 340
AP + K + + W P + Y + W N E L
Sbjct: 617 -----DAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEPGNWKEL----L 667
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS-AEDMPQVAPQGVFS 399
+ GN AV+++ +Y +V +N VG GP SE + P P+ +
Sbjct: 668 RVPGNHNSAVLKLHGN---VDYCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKI 724
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +++ W P+ I N G + +++ Y ++D E+ + + R + +V
Sbjct: 725 EGHLAHEMDINWEPLLPIEHN--GPGLEYKVSYRRQDLEEDWQEHMVKRHS----FVVKN 778
Query: 460 QPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P Y +K+ A NN G GP+ + + P P V ++ +N + V V+W V
Sbjct: 779 TPTFVPYEIKIQAKNNQGWGPDPKIVTGYSGEDFPSAAPDDVAVEVMNSSVVKVSWTRVH 838
Query: 519 PSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W VD S + + + G+ A + L+P Y + V+
Sbjct: 839 KDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHTLTIPGDRNHAAVPGLTPFSEYSLIVMT 898
Query: 574 FSNGGDGRMSSPAITFQMGE 593
F+ G+G S P + F+ E
Sbjct: 899 FNGRGNGPGSHP-VNFKTPE 917
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 122/556 (21%), Positives = 214/556 (38%), Gaps = 77/556 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNV 65
++ + C E P P+ W K G+ + + K+ +G LLI P V ++DSG Y C A N
Sbjct: 262 DLKLECIAEGFPTPQVEWVKVGHRLPI--KAKLENHGKLLIVPRVEQEDSGKYMCKAKNA 319
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G + + P + + ++++ ++ ++CSA + + R+
Sbjct: 320 LGEAVHYFTVTIEEPPEWVSEPESQLSMIG-SDVLIKCSASGTPQPTITW-------RVN 371
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
+ L E N + G + + NA +D+ Y+C + + + +++ LP
Sbjct: 372 GVPLQEAPAANRKVLGDTILLRNAKASDSAVYQCEASNRHRTLLSNANIMIM---NLPPM 428
Query: 186 VQVVEVHKTSATIQWTDGATNGRPI-THYKIIARTNWNSTWF--NVSEHVIGKEVDRYTG 242
+ E S A G+ + H K+ + TW + SE V G R+
Sbjct: 429 ILTKEGEDYS--------AVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEGP---RFAV 477
Query: 243 RKEASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
S+E V T ++ +A N G + + Y + P + G
Sbjct: 478 HDNGSLEIYSVEKGDTGQYTCLAKNT--EGSSAIDTMLYVKDPTRIVVPPEHLQILIGTT 535
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
LS E Y + F KND E L E ++ IA+ + Y+ E
Sbjct: 536 AQLSCLAE------------YDESF---KNDIEL----LWEKDDMEIALNYTENSRYFVE 576
Query: 362 YEVKVQAIN----DVG--------PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +Q IN D G P + D+P AP+ + S ++ +
Sbjct: 577 DGI-LQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLDVPD-APEYLVLSERKSKSVKL 634
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVK 468
WNP + + +I + W+ N +E L R N + ++ L + Y +
Sbjct: 635 KWNPGDNHNSSTTEFIIEYEESQWEPGNWKE-----LLRVPGNHNSAVLKLHGNVDYCFR 689
Query: 469 VMAYNNAGEGPES---ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V N+ G GP S ERY + AP K P + I+G + + W + P P
Sbjct: 690 VSGVNSVGRGPSSEPTERY--KPPAAAPDKNPENIKIEGHLAHEMDINWEPLLPIEHNGP 747
Query: 526 IIGYKV--RVWEVDQD 539
+ YKV R ++++D
Sbjct: 748 GLEYKVSYRRQDLEED 763
>gi|47224415|emb|CAG08665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 920
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 169/639 (26%), Positives = 277/639 (43%), Gaps = 90/639 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + T+ C P+P+ W K+G ++ + + ++ DDSG+Y C A N
Sbjct: 316 GSDYTMSCVASGKPEPQIRWMKNGELL---------DRKEMSFRSLTFDDSGMYQCIAAN 366
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG+ + L V + P K +A RN ++ + + W+ + +
Sbjct: 367 RHGVIYANAELRVFACAPTFRHNPLKRVLAP-RNGRVVIKCRPKGAPKPTFTWSKDTELL 425
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP---- 179
N T + G LEI N + AD G Y C ++ GK ST + +++E
Sbjct: 426 SN------STRVFIWEDGSLEILNVTRADEGRYTCFAENDRGKANSTGSLLVLESTKITL 479
Query: 180 ----------------------PGLPGGV------QVVEVHKTSATIQW-TDGATNGRPI 210
P L V+++H S + T+G++NG +
Sbjct: 480 APSSADVKAGENALMHCAASHDPSLDIAFIWSLDGHVIDLHTDSQHYERGTNGSSNGALL 539
Query: 211 T---------HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 261
Y A+T ++ S H++ + G E + L PW+ YEF+
Sbjct: 540 IKNAQLKHAGRYTCTAQTPIDNV--AASAHLVVRAPPDVEGNAEKATVVDLFPWTEYEFR 597
Query: 262 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 321
VIA N LG GEPSSPSP+ T P APS I GGGG +L+I+W P+ + PN
Sbjct: 598 VIAANTLGTGEPSSPSPKEKTLDAIPVVAPSNISGGGGTSRELTITWTPVQPQHYYGPNF 657
Query: 322 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY---TEYEVKVQAINDVGPGPES 378
Y + +R ++ E++ + + +A I + + T+++VKV+A N G GP S
Sbjct: 658 GYIVAFRPYDNREWRKVMVAD----PLARSYIHKDLTFPPLTKFQVKVKAFNSKGEGPFS 713
Query: 379 EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-EDN 437
I+SA+D P AP G + ++T V W P+ + + G+++K+W+ +
Sbjct: 714 LAAVIYSAQDAPSEAPAGFDGKALSATEAFVWWLPLP------QDSIDGYQVKFWRNHEE 767
Query: 438 PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK------ 491
E A + T + G++P++ Y ++V YN AG GP SER + RT +
Sbjct: 768 SEGGAQTVTASNTDTSTRLEGMKPNSNYLIEVWGYNTAGFGPPSERLVIRTKKARTSFCC 827
Query: 492 --APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP 549
P +PP + K + T+++ W P +E I GYKV + + T
Sbjct: 828 CLTPSQPPR-ITSKRMKGHTINIAWENSQPQPDEAAIDGYKVLYRKQGSSQGKLYTT--- 883
Query: 550 VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D+ S G Y + V A + GGDG ++ IT
Sbjct: 884 --SRRSIDLPLPSEGN-YMVEVRAHTEGGDGAVAQIQIT 919
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C P+ APKP F W KD ++ + R I+E+G+L I V+R D G Y+C
Sbjct: 396 APRNGRVVIKCRPKGAPKPTFTWSKDTELLSNSTRVFIWEDGSLEILNVTRADEGRYTCF 455
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L+VL + P + A N + C+A + LD+A+IW+ +G
Sbjct: 456 AENDRGKANSTGSLLVLES-TKITLAPSSADVKAGENALMHCAASHDPSLDIAFIWSLDG 514
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + D E G L I NA AG Y C ++ + ++ ++V PP
Sbjct: 515 HVIDLHTDSQHYERGTNGSSNGALLIKNAQLKHAGRYTCTAQTPIDNVAASAHLVVRAPP 574
Query: 181 GLPGGVQVVEV 191
+ G + V
Sbjct: 575 DVEGNAEKATV 585
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A +V L P T+Y +V+A N G G P S E+T P PS + G + +
Sbjct: 583 ATVVDLFPWTEYEFRVIAANTLGTGEPSSPSPKEKTLDAIPVVAPSNISGGGGTSRELTI 642
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW V P P GY V D R P+ + + P ++ ++V
Sbjct: 643 TWTPVQPQHYYGPNFGYIVAFRPYDNREWRKVMVADPLARSYIHKDLTFPPLTKFQVKVK 702
Query: 573 AFSNGGDGRMSSPAITF 589
AF++ G+G S A+ +
Sbjct: 703 AFNSKGEGPFSLAAVIY 719
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 23/166 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G N+T+ C P P +WKK DG + + R +L + V +DSG Y C A
Sbjct: 227 GQNITLECFALGNPVPDIMWKKVDGELPSNHEVRTA--GAHLHLFNVQFEDSGTYKCEAV 284
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G D RL V P + E + + + + + S E + W NG
Sbjct: 285 NSKGKDYHTARLSVEAFPEWVEHITNTEKDLGSDYTMSCVASGKPEPQIR----WMKNG- 339
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
EL +D + + +F D+G Y+C+ + G I
Sbjct: 340 --------EL------LDRKEMSFRSLTFDDSGMYQCIAANRHGVI 371
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 71/194 (36%), Gaps = 23/194 (11%)
Query: 1 YAGEGGNVTIFCNPE----AAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDS 55
Y EG + C P A +++ + I RR + + GNL IS V DS
Sbjct: 118 YVKEGQGAVLLCAPPPHYPAELSFRWILNEFPTFIPLDKRRFVSQITGNLYISKVDSSDS 177
Query: 56 GIYSCTATNVHGMDESKGRLIVL------HGPSYYEQLP---PKITIAAHRNLQLRCSAH 106
G YSC A++ I L H Y L P T +N+ L C A
Sbjct: 178 GNYSCIASSPSISKSVFSNYIPLVPLSERHNRKYPADLNVKFPDTTALVGQNITLECFAL 237
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ D+ +W +D + G L + N F D+G Y+C ++ G
Sbjct: 238 GNPVPDI--MWK-------KVDGELPSNHEVRTAGAHLHLFNVQFEDSGTYKCEAVNSKG 288
Query: 167 KISTKTTVIVEGPP 180
K + VE P
Sbjct: 289 KDYHTARLSVEAFP 302
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 23/168 (13%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
+T+ C A+P + W+KD I + G GNL+IS PV G YSC A N
Sbjct: 30 ITMNCRARASPPATYKWRKDNTEIDFSAEGSHYSLMGGNLVISSPVKEQHVGNYSCLAAN 89
Query: 65 VHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
G S+ + + + + + + + L C+ ++++ W
Sbjct: 90 AFGAVVSREASVQFGYLDLFSSEEREAVYVKEGQGAVLLCAPPPHYPAELSFRWI----- 144
Query: 124 IGNMDLNELETPNINIDG--------GLLEITNASFADAGEYECVVKS 163
LNE T I +D G L I+ +D+G Y C+ S
Sbjct: 145 -----LNEFPT-FIPLDKRRFVSQITGNLYISKVDSSDSGNYSCIASS 186
>gi|348568091|ref|XP_003469832.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Cavia
porcellus]
Length = 1211
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 235/531 (44%), Gaps = 52/531 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 534 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ +D G Y CV +T+ ++S + V P
Sbjct: 593 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+N +G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRGRL G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
N GEGP S T P P S +K +NPT +T + PS
Sbjct: 929 RVVNGKGEGPASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPS 976
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 432 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 485
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + + D+ + + G LEI A ++G Y CV ++ +G +
Sbjct: 486 IEWFKGAKGSAL-HEDIYVIH------ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 539 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 591
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + +V A L P+ +P+P Y+
Sbjct: 592 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVAPTPTPAPIYD 645
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P+ P + + +SW P + N+P + I + ++
Sbjct: 646 VPS-----PPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQA 698
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 699 EVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAV 753
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 754 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 809
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N G PE + P P V + +N T V W V
Sbjct: 810 GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 869
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 870 PLKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 928
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 929 RVVNGKGEGP-ASPDRAFSTPE 949
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 400
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 401 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 432
>gi|348568095|ref|XP_003469834.1| PREDICTED: neuronal cell adhesion molecule isoform 6 [Cavia
porcellus]
Length = 1192
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 258/593 (43%), Gaps = 55/593 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D+SG Y+C A N G+
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALHEDIYVIHENGTLEIPVAQKDNSGTYTCVARNKLGV 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + + N +
Sbjct: 515 AKNEVHLEI-KDPTRILKQPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPNDE 573
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L +T+ +D G Y CV +T+ ++S + V P
Sbjct: 574 -------RFTVDKDHLVVTDVRDSDGGIYTCVANTTLDEVSASAVLSVVAPTPTPAPIYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 627 VPSPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQAE------ 680
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 681 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSLPSEASEQYQTKAAEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+N +G PE VVT S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRGRL G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGRLQGYRIYYWKAQSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDRAFSTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 967 TLKYQPINSTHELGPLIDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPG 1018
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 130/622 (20%), Positives = 233/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 356 GEDG--TLICRANGNPKPRISWLTNGVPTEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 412
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLD 112
C A+N +G + + VL +LP +T + A+R L C+ L
Sbjct: 413 CNASNEYGYLLANAFVNVL------AELPRILTPANTLYQVIANRPAFLDCAFFGSPLPT 466
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + G + + D+ + + G LEI A ++G Y CV ++ +G +
Sbjct: 467 IEWFKGAKGSAL-HEDIYVIH------ENGTLEIPVAQKDNSGTYTCVARNKLGVAKNEV 519
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ ++ P ++++ A +Q + + H + +IA W N
Sbjct: 520 HLEIKDP------TRILK-QPEYAVVQRGGRVSFECKVKHDHTLIATVTWLKDNGELPND 572
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + +V A L P+ +P+P Y+
Sbjct: 573 ERFTVDKDHLVVTDVRDSDGGIYTCVANTTLD------EVSASAVLSVVAPTPTPAPIYD 626
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P+ P + + +SW P + N+P + I + ++
Sbjct: 627 VPS-----PPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHEAGLWHHQA 679
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 680 EVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSLPSEASEQYQTKAAE--PDKNPTAV 734
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 735 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 790
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N G PE + P P V + +N T V W V
Sbjct: 791 GTPTFVPYLIKVQALNVMGFAPEPAVVTGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 850
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N + G+ + L P Y + V
Sbjct: 851 PLKSIRGRLQGYRIYYWKA-QSASQRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYALNV 909
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 910 RVVNGKGEGP-ASPDRAFSTPE 930
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPLIYWIKEDGTLPANRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV- 122
N G+ + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NTLGIIRHTISVTVKAAP-YWIMAPRNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 381
Query: 123 -RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I D P+ IDG + +N + Y+C
Sbjct: 382 TEIAPDD------PSRRIDGDTIIFSNVQERSSAVYQC 413
>gi|348526542|ref|XP_003450778.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
niloticus]
Length = 1508
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 264/594 (44%), Gaps = 62/594 (10%)
Query: 10 IFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
+ C +P P W KD I I + I ENG L I+ +SG Y+C ATN G+
Sbjct: 657 LHCASFGSPIPTITWFKDSQISIRNTDPYVIHENGTLEINVAQPLNSGKYTCIATNNLGI 716
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
E+ L V P+ + P + + C + L W D
Sbjct: 717 KENHVFLEVKE-PTRILKQPEYKVVQRGMSAVFECKVKHDPSLIPTMTWLK--------D 767
Query: 129 LNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
EL + +D L I + + D G Y C++ +T+ + S + V P P ++
Sbjct: 768 RGELPDDERFEVDADSLTIRDVTDDDKGTYTCIMNTTLDQDSASAMLTVVEKPDPPTDLE 827
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
+ + + S + WT G N PI + I + W N++E V G
Sbjct: 828 LTDQTERSVQLTWTPGDENNSPIEKFVIQYGDLLHQPGVWTNLTE-VPGTST-------- 878
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+ + L P+ Y F+V+A N +GY EPS S QY T P + PS + G G + G+L
Sbjct: 879 -TAQLHLSPYVYYSFRVLAKNRVGYSEPSQSSRQYRTNPAAPDENPSGVQGVGTEPGNLV 937
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR-IPSEFYYTEYE 363
ISW PL + N P + YK+ WR+K+ + E+ ++ + NV VV P+ Y YE
Sbjct: 938 ISWTPLTGLQSNGPGLEYKVQWRQKDVEKEWSAQNV---ANVSQWVVSGTPT---YVPYE 991
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
+KVQA ND G GPE EV +S ED+P AP+ + NST V W PI ++RG
Sbjct: 992 IKVQAFNDYGVGPEPEVAIGYSGEDLPLSAPESIQVMVHNSTLAEVHWEPIS--PPSVRG 1049
Query: 424 RLIGHRIKYWK--------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+L G+++ Y + E+ +E V S R+ + GLQP + Y + + NN
Sbjct: 1050 KLQGYKVYYRRKHGLHETEEETDQEMQVLTFS-GNRSEGRLPGLQPYSVYSLSIRVLNNK 1108
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
GEGP S+ T P PPS +++ INP +T + P + GY ++
Sbjct: 1109 GEGPSSQSKTFETPEGVP-GPPSFLNV--INPGLDSLTLEWGPPINNNGRLTGYILKYQP 1165
Query: 536 VD--------QDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
V+ Q M+ AN+T I + N L+ Y + A +N G G
Sbjct: 1166 VNNTSELGPVQFMTFLANETTITLSN--------LNSSMLYKFYLSAKTNKGSG 1211
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 27/273 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G + + C E P P W+K+G + S R + N L IS V+ +D+G Y C A
Sbjct: 468 GQTLELECIAEGLPTPDISWQKEGGELPSN--RVSYHNFKKTLKISDVNENDAGNYRCVA 525
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
TN G ++ V P ++ +P + +A + L C + E + W NG+
Sbjct: 526 TNNLGTIHHTIKVTVKAAP-FWVSIPRNLILAPNETGVLTCRVNGEPKPRID--WFVNGI 582
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I N E P+ ++ + ++N + Y+C + G + +V+ E P
Sbjct: 583 PIENTP----EDPSRKVEDDTVILSNVQSGSSAVYQCNASNEFGYLLANAFVSVLAEPPR 638
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L QV +V S + A+ G PI TWF S+ I + D Y
Sbjct: 639 VLTPPNQVYQVITNSPAL--LHCASFGSPIPTI----------TWFKDSQISI-RNTDPY 685
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 272
+ ++E NV P ++ ++ IA N LG E
Sbjct: 686 VIHENGTLEINVAQPLNSGKYTCIATNNLGIKE 718
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 12/242 (4%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y +V A N VG S+ + P P GV G + ++W P+ +
Sbjct: 887 YVYYSFRVLAKNRVGYSEPSQSSRQYRTNPAAPDENPSGVQGVGTEPGNLVISWTPLTGL 946
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+ N G + +++++ ++D +E + ++ ++ W ++ G Y +KV A+N+ G
Sbjct: 947 QSN--GPGLEYKVQWRQKDVEKEWSAQNVANVSQ-W-VVSGTPTYVPYEIKVQAFNDYGV 1002
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR----- 532
GPE E + + P P ++ + N T V W +SP + GYKV
Sbjct: 1003 GPEPEVAIGYSGEDLPLSAPESIQVMVHNSTLAEVHWEPISPPSVRGKLQGYKVYYRRKH 1062
Query: 533 -VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
+ E +++ + + GN + + L P Y + + +N G+G SS + TF+
Sbjct: 1063 GLHETEEETDQEMQVLTFSGNRSEGRLPGLQPYSVYSLSIRVLNNKGEGP-SSQSKTFET 1121
Query: 592 GE 593
E
Sbjct: 1122 PE 1123
>gi|2511666|emb|CAA04507.1| NrCAM protein [Homo sapiens]
Length = 1299
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 265/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPLPTIQWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 529 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 582
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 583 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPIT--HYKIIARTNWNSTWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT H + + W + +E
Sbjct: 641 VPNPPLDLELTDQLDKSVQLSWTPGDDNNSPITTIHDEYEDAMHKPGLWHHQTE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K D E+ S + NV +V
Sbjct: 751 LGSEPDNLVITWKPLNGFEFNGPGLQYKVSWRQKVGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 808 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 866 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASPDRVFNTPEGVPSVPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 TLKYQPINNTHELGPLVDLKIP-ANKTRWTLKNLNFTTRYKFYFYAQTSAGSGSQITEEA 1039
Query: 587 IT 588
+T
Sbjct: 1040 VT 1041
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 130/618 (21%), Positives = 226/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 370 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 426
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 427 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIQWF 484
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 485 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 537
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 538 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 587
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 588 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 642
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P + Y+ K Q+E
Sbjct: 643 --NPPLDLELTDQLDKSVQLSW--TPGDDNNSPITTIHDEYEDAMHKPGLWHHQTEV--- 695
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 696 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 752
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++ +E ++ ++ ++ G
Sbjct: 753 SEPDNLVITWKPLNGFEFN--GPGLQYKVSWRQKVGDDEWTSVVVANVSK--YIVSGTPT 808
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 809 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 868
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 869 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 927
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 928 GKGEGP-ASPDRVFNTPE 944
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 26/217 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 337
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 394
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
I + P+ IDG + +N + Y+C + G + V ++ PP
Sbjct: 395 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 450
Query: 182 L--------------PGGVQVVEVHKTSATIQWTDGA 204
+ P + TIQW GA
Sbjct: 451 ILTPANTLYQVIANRPALLDCAFFGSPLPTIQWFKGA 487
>gi|355747930|gb|EHH52427.1| hypothetical protein EGM_12865 [Macaca fascicularis]
Length = 1310
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 266/604 (44%), Gaps = 58/604 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIIKQPEYAVVQRGSMVSFECKVKHDYTLTLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L I + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVIADVSDNDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHEPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHR--IKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
L ++IRG L G+R I YWK + + ++ + ++ ++ GL+P + Y +
Sbjct: 871 L--KSIRGHLQGYRASIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTL 928
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 929 NVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWHPPSHPNGILT 985
Query: 528 GYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSS 584
Y ++ ++ ++ D IP N + +L+ RY A ++ G G +++
Sbjct: 986 EYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITE 1044
Query: 585 PAIT 588
A+T
Sbjct: 1045 EAVT 1048
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 124/611 (20%), Positives = 223/611 (36%), Gaps = 54/611 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVS-EHV 232
+ P + + V + S + + + +T + + N + F V +H+
Sbjct: 543 KDPTWIIKQPEYAVVQRGS-MVSFECKVKHDYTLTLTVLWLKDNRELPSDERFTVDKDHL 601
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAP 291
+ +V + N + V A L P+ +P+P Y+ P P
Sbjct: 602 VIADVSDNDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPVYDVP-----NPP 650
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAV 350
+ + +SW P + N+P + I + ++ + G A
Sbjct: 651 FDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDTMHEPGLWHHQTEVSGTQTTAQ 708
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V A+N +G SE + + P P V G + +
Sbjct: 709 LKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVI 765
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW P+ N G + +++ + ++D +E ++ ++ ++ G Y +KV
Sbjct: 766 TWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKV 821
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G PE + + P P V + +N T V W V + GY
Sbjct: 822 QALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGY 881
Query: 530 KVRV--WEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
+ + W+ R + G+ + L P Y + V + G+G
Sbjct: 882 RASIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP- 940
Query: 583 SSPAITFQMGE 593
+SP F E
Sbjct: 941 ASPDRVFNTPE 951
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|296488522|tpg|DAA30635.1| TPA: neuronal cell adhesion molecule isoform 2 [Bos taurus]
Length = 1183
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 258/592 (43%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L +W + + N
Sbjct: 528 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-- 584
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+D L + + + D G Y CV +T+ +S + V P P +++
Sbjct: 585 -----DGRFTVDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEA 246
+ S + WT G N PIT + I + W + +E V G +
Sbjct: 640 TDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQT--------- 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND G PE V S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 805 VQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPL--KSIRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + ++ + ++ ++ GL+P + Y + V N GEGP
Sbjct: 863 QGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S + T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTEYTLKYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A + G G +++ AIT
Sbjct: 980 HELGPLVDLKIP-ANKTRWILKNLNFSTRYKFYFYAQTAAGSGIQITEEAIT 1030
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 24/181 (13%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 373 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 431
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT------- 118
+G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 432 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEW 482
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + E + + G LEI A G Y CV ++ +G + ++
Sbjct: 483 FKGAKGSALR----EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKD 538
Query: 179 P 179
P
Sbjct: 539 P 539
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NALGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|432953128|ref|XP_004085301.1| PREDICTED: neurofascin-like, partial [Oryzias latipes]
Length = 1072
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 243/543 (44%), Gaps = 46/543 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG + C +P P W K G G R K NG L + + D G Y C +
Sbjct: 432 EGSRTFLDCRFFGSPVPDLRWSKYGQGNLEGTRFKTHSNGTLEVKRIQLQDEGTYVCVIS 491
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G DE++ R+ V P P + + +++L C+ + W N +
Sbjct: 492 NIAGRDENQVRVEVKE-PIVIVTKPQSMKVIRGSDVRLECAVKADATTPFTTSWIKNKKQ 550
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ +++D L IT+ + D G Y CV K+ + + S ++V P P
Sbjct: 551 VTF-------GWRVSLDESNLVITDVNRGDEGNYTCVFKNELDQKSASAHLLVMDRPNPP 603
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNW-NSTWFNVSEHVIGKEVDRYT 241
+++ + + S + W G +N PIT Y + +W W N+S Y
Sbjct: 604 TNLELSDPFERSVRLSWVPGDSNHSPITDYLVQYDDDDWLPGKWRNLST---------YP 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G + I + L P++ YEF+VIA N +G PS S ++ T P P + G G
Sbjct: 655 GNLNSVILH-LTPFTYYEFRVIAINAIGASRPSRSSARFQTSGAPPDVIPKNVKGVGTWR 713
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYY 359
++ ISWEPL + N P++ Y ++WR+++ E E+ N +R I +
Sbjct: 714 NNMEISWEPLTYREWNGPHLKYLVWWRRRDSRE-------EWKNATTKWLRYYIYDADTF 766
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T YE+KVQA+ND G GPES VV +S ED P AP + ST + V W+P+ RE
Sbjct: 767 TPYEIKVQAVNDFGLGPESPVVIGYSGEDRPLAAPLNLRISDIESTQVTVHWDPVS--RE 824
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN----------WALIVGLQPDTKYYVKV 469
NI G L +++ YW++ + + +++R ++ +I L P + Y + +
Sbjct: 825 NIMGELKEYKVYYWRDSS--QLRWLWVNRGMKSKIFPNNDPEPSGVITDLIPYSNYKMYI 882
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ N+ EGP S T P P++ I+ + +++V W P+ I GY
Sbjct: 883 VVANSRFEGPPSNNIHFSTPEGVPSA-PTSFRIQQRHLDSIYVDWDL--PAEPNGIITGY 939
Query: 530 KVR 532
++
Sbjct: 940 SLK 942
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTA 62
+G + + C P P W KDG+ + KI N + I + +D+G Y+C+A
Sbjct: 247 QGEELLLECIAAGVPTPHIAWTKDGDELAVTPSMKIKNFNKMIQIPKAAFEDAGEYTCSA 306
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
TN G E +IV P + E+ P + +A +L C + ++ W NG
Sbjct: 307 TNKIGYIEHTISVIVKAAPFWVEK-PTNLILAPEETGRLVCRSDGVPRPTIS--WFMNGD 363
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
I + ++ N + G + + + + + Y+C + G + V ++ P
Sbjct: 364 PIEDA----MQQSNRLVAGDTITLRSVTAENTAVYQCNASNQYGYLLANAFVNVLHSTPR 419
Query: 182 LPGG----VQVVEVHKT 194
+ G V+V+E +T
Sbjct: 420 IIGPRNEVVKVIEGSRT 436
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 13 NPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGI-YSCTATNVHG--- 67
+P PKP+ W + R + NG+L S V +DS + Y C A H
Sbjct: 151 SPAGPPKPETYWMSSSMQPVRQDRRVSMGINGDLYFSNVLFNDSVVDYCCNARFPHKNAI 210
Query: 68 MDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQ-----LRCSAHTEELLDVAYIWT 118
++ + VL S E P PK + ++ LQ L C A +A WT
Sbjct: 211 QQKTPVVVKVLSTRSIAEAAPTWLSPKGSSSSKLVLQGEELLLECIAAGVPTPHIA--WT 268
Query: 119 HNGVRIGNMDLNELE-TPNINIDG--GLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+G +EL TP++ I +++I A+F DAGEY C + +G I +VI
Sbjct: 269 KDG--------DELAVTPSMKIKNFNKMIQIPKAAFEDAGEYTCSATNKIGYIEHTISVI 320
Query: 176 VEGPP 180
V+ P
Sbjct: 321 VKAAP 325
>gi|351708733|gb|EHB11652.1| Neural cell adhesion molecule L1, partial [Heterocephalus glaber]
Length = 1214
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 265/600 (44%), Gaps = 56/600 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG + I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTMAIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIV-LH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ LH + Q P + C A + L + W
Sbjct: 497 QAAN----DQNNVTIVANLHVKEATQITQGPRNAIEKKGSRVTFTCQASFDPSLQRSITW 552
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + ++ + ++V
Sbjct: 553 RGDG-----HDLQELGDSDKYFIEDGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLLV 607
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG V+V E H + + WT + I Y I +A W
Sbjct: 608 VGSPGPVPHVEVSERHLGKHSQVHLSWTPAEDHNAAIEKYDIEFEDIEMAPEKW------ 661
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
H +GK + S L P+ Y F+V A N+ G GEPS PS TP P
Sbjct: 662 ---HSLGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAP 713
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNV 346
+ P+ + G G + ++ I+W+PL NAP + Y++ WR + +Q +T+ +
Sbjct: 714 EKNPADVRGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQTVSD---- 769
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE++VQA+N G GPE +V +S ED PQV+P+ + NSTA
Sbjct: 770 SFLVVTNTSTF--EPYEIRVQAVNSQGKGPEPQVTIGYSGEDYPQVSPELEKVKPLNSTA 827
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
V W P+ L + ++G L G+ + YW E + + ++ R ++ GL+
Sbjct: 828 ALVRWKPVALAQ--VKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSVILGGLR 885
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y+V+V A+N G GP ++ E T P P A+H++ + T++ + W+ P
Sbjct: 886 PYSSYHVEVRAFNGRGSGPAGQQSFE-TPEGVPGH-PEALHLECQSSTSLLLHWQ--PPL 941
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + + +D + + ++ +LSP RY ++ A + G G
Sbjct: 942 SHNGVLTGYMLSYYPLDTGGEQQLSFPLQDPELRTHNLTNLSPDVRYRFQLQATTREGPG 1001
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 151/644 (23%), Positives = 248/644 (38%), Gaps = 85/644 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +GN + + + ++ G L++S V D+ + C
Sbjct: 344 GPGETARLDCQAQGRPQPEVTWRINGNRMEELDKDQTYQIHRGALILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + + T LL A+
Sbjct: 404 EARNRHG-------LLLTNAYIYVVQLPAKI-LTSDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKIS---- 169
G + ++ + E + D N + A D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTMAIRDLQANDTGRYFCQAANDQNNVTIVAN 510
Query: 170 ---TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ T I +GP + K + + +T A+ P I W
Sbjct: 511 LHVKEATQITQGPRN--------AIEKKGSRVTFTCQASFD-PSLQRSI----TWRGDGH 557
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
++ E +G + D+Y + + L + +A EL E + +P
Sbjct: 558 DLQE--LG-DSDKYFIEDGRLVIDSLDYSDQGNYSCVASTELDEVEGRAQLLVVGSPGPV 614
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
P+ S GK + +SW P E NA Y I + D E E G V
Sbjct: 615 PHVEVSE--RHLGKHSQVHLSWTPA--EDHNAAIEKYDIEFE---DIEMAPEKWHSLGKV 667
Query: 347 -GIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
G Y Y +V AIN GPG P T+ + E P+ P V G +
Sbjct: 668 PGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPADVRGEGNET 727
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV----GLQ 460
+ +TW P+ + N +++Y + P+ T + +T + L+V +
Sbjct: 728 NNMVITWKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQTVSDSFLVVTNTSTFE 781
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P Y ++V A N+ G+GPE + + + PQ P +K +N T V W+ V+ +
Sbjct: 782 P---YEIRVQAVNSQGKGPEPQVTIGYSGEDYPQVSPELEKVKPLNSTAALVRWKPVALA 838
Query: 521 FEEEPIIGYKVRVW-------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ + GY V W + + R + ++ NT + L P YH+ V A
Sbjct: 839 QVKGHLRGYNVTYWWEGSQRRHSKRHVHRGH--VVVAANTTSVILGGLRPYSSYHVEVRA 896
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSP-ALY---SASTTLLL 613
F +GR S PA Q E E G P AL+ +ST+LLL
Sbjct: 897 F----NGRGSGPAGQ-QSFETPEGVPGHPEALHLECQSSTSLLL 935
>gi|226955344|gb|ACO95339.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Dasypus
novemcinctus]
Length = 1039
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 262/594 (44%), Gaps = 48/594 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
EG + C AP P W + G + R NG L I + +D+G Y C A
Sbjct: 226 EGSTAHLLCKAFGAPVPSVQWLNEKGETVLQDERFFPHANGTLGIRELQANDTGRYFCQA 285
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
TN + + ++ + + Q P + N+ C A + L + W NG
Sbjct: 286 TNDQN-NVTIMAVLQVKDATQITQGPQRAVKKKGSNVTFTCQASFDPSLQHSITWRANG- 343
Query: 123 RIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G PG
Sbjct: 344 ----HDLQELGDSDKYFIEDGRLVINSLDYSDQGNYSCVAGTQLDVVESRAELLVVGSPG 399
Query: 182 LPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEHV 232
+++ + H ++ + W + PI Y I +AR W H
Sbjct: 400 PVPQLELSDHHLLEQSQVRLSWRPAEDHNAPIEKYNIEFEDKEMARGKW---------HS 450
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G T A+++ L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 451 LGNVPGNQT---SATLK--LSPYVHYTFRVTAINKCGPGEPSLTSETVVTPEAAPEKNPK 505
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W+PL NAP + Y++ WR++ E + V +
Sbjct: 506 DVKGEGNETHNMVITWQPLGWMDWNAPQVQYRVQWRRQGARGTWQEQI-----VSDPPLV 560
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ + + YE+KVQA+N G GPE V +S ED PQ +PQ NS+ + V W
Sbjct: 561 VANTSTFVPYEIKVQAVNSQGKGPEPHVTIGYSGEDFPQASPQLEGIEILNSSTVLVKWW 620
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDTKYY 466
P++ + ++G L G+ + YW+ NP++ + ++ R + + GL+P + Y+
Sbjct: 621 PVDPAQ--VKGHLRGYNVTYWRTGNPKKHSKRHIHRAHVVVPSDATSVTLGGLRPYSAYH 678
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
V+V A+N G GP S+ T P P A+H++ + T++ + W+ P +
Sbjct: 679 VEVRAFNGRGAGPASDMTFS-TPEGVPGH-PEALHLECQSDTSLLLRWQ--PPLSHNGVL 734
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D+ +P ++ +LSP RY ++ A + G G
Sbjct: 735 TGYVLSYHALDEGGKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTKEGPG 788
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 149/641 (23%), Positives = 246/641 (38%), Gaps = 78/641 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + F + G+L++S V D+ + C
Sbjct: 131 GPGETARLDCQAQGRPQPEVSWRINGIPVTELTSDQKFRIQRGSLILSNVQPADTMVTQC 190
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLD 112
A N HG L++ + Y QLP KI + L C A +
Sbjct: 191 EARNRHG-------LLLANAYIYVVQLPTKILTPDNQTYMVVEGSTAHLLCKAFGAPVPS 243
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ G + +E P+ N G L I D G Y C + ++
Sbjct: 244 VQWL-NEKGETVLQ---DERFFPHAN---GTLGIRELQANDTGRYFCQATNDQNNVTIMA 296
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G Q V K + + +T A+ + H W + ++ E
Sbjct: 297 VLQVKDATQITQGPQRA-VKKKGSNVTFTCQASFDPSLQH-----SITWRANGHDLQE-- 348
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS---------PSPQYNTP 283
+G + D+Y + N L + +AG +L E + P PQ
Sbjct: 349 LG-DSDKYFIEDGRLVINSLDYSDQGNYSCVAGTQLDVVESRAELLVVGSPGPVPQLEL- 406
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
+D S++ +SW P E NAP Y I + K + +L
Sbjct: 407 SDHHLLEQSQV----------RLSWRPA--EDHNAPIEKYNIEFEDKEMARGKWHSLGNV 454
Query: 344 -GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRG 401
GN A +++ Y Y +V AIN GPG P T+ + E P+ P+ V G
Sbjct: 455 PGNQTSATLKLSP---YVHYTFRVTAINKCGPGEPSLTSETVVTPEAAPEKNPKDVKGEG 511
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQ 460
+ + +TW P+ + N + +R++ W+ T + + + L+V
Sbjct: 512 NETHNMVITWQPLGWMDWN--APQVQYRVQ-WRRQGARGT---WQEQIVSDPPLVVANTS 565
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
Y +KV A N+ G+GPE + + PQ P I+ +N +TV V W V P+
Sbjct: 566 TFVPYEIKVQAVNSQGKGPEPHVTIGYSGEDFPQASPQLEGIEILNSSTVLVKWWPVDPA 625
Query: 521 FEEEPIIGYKVRVWEV-------DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ + GY V W + + RA+ ++P T + L P YH+ V A
Sbjct: 626 QVKGHLRGYNVTYWRTGNPKKHSKRHIHRAH-VVVPSDAT-SVTLGGLRPYSAYHVEVRA 683
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
F+ G G S +TF E + L S T LL+
Sbjct: 684 FNGRGAGPASD--MTFSTPEGVPGHPEALHLECQSDTSLLL 722
>gi|211279|gb|AAA48632.1| cell adhesion molecule, partial [Gallus gallus]
Length = 1260
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 250/549 (45%), Gaps = 50/549 (9%)
Query: 10 IFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C +PKP+ W + G+I+ G +NG L I +D +G Y+C A N G
Sbjct: 426 IDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLG 484
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+++ +L V P+ + P I C + L IW + N
Sbjct: 485 KTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NN 538
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVE 177
+L + E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 539 ELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIY 596
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + W G N PIT++ I + W +E V G
Sbjct: 597 ARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGS 655
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ +++ L P+ Y F+VIA NE+G +PS PS QY T + P + PS +
Sbjct: 656 Q---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQ 706
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 707 GIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGT 763
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F YE+KVQA+ND+G PE V S ED+P VAP V NST V W+P+
Sbjct: 764 PTF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPV 821
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVK 468
L +++RG L G+++ YWK + + ++ R + + ++ GL+P + Y +
Sbjct: 822 PL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLN 879
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + +T P PPS + I NPT +T + SP+ +
Sbjct: 880 VRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI--TNPTLDSLTLEWGSPTHPNGVLTS 936
Query: 529 YKVRVWEVD 537
Y ++ ++
Sbjct: 937 YILKFQPIN 945
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 242/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 327 GEDG--TLICRANGNPKPSISWLTNGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQ 383
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A++ Q+ A + L+D AY +
Sbjct: 384 CNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IADSPALIDCAYFGSP 434
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE + D G LEI A G Y CV ++ +GK +
Sbjct: 435 KPEIEWFRGVKGSILRGNEY----VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEV 490
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSA---------------TIQWTDGATNGRPITHYKIIA 217
+ V+ P + Q + +++ T+ W N P ++
Sbjct: 491 QLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-NNELPDDERFLVG 549
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 550 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 593
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDT 333
Y P P + G + +SW +P E+ N+P I Y+ +
Sbjct: 594 IIYARP-----NPPLDLELTGQLERSIELSW--VPGEENNSPITNFVIEYEDGLHEPGVW 646
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E V + + Y Y +V A+N++G P SE SA P
Sbjct: 647 HYQTEVPGSQTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--P 698
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW ++ + N G + +++ + ++D +E ++ +
Sbjct: 699 DENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVVVANVS 756
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 757 K--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 814
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 815 KVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPY 873
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F+ E
Sbjct: 874 SSYKLNVRVVNGKGEGP-ASPDKVFKTPE 901
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 127/561 (22%), Positives = 206/561 (36%), Gaps = 80/561 (14%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y CTA
Sbjct: 237 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCTA 294
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 295 RNTLGSTHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 351
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 352 PIAIAP----EDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 407
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 408 ILTPANKLYQVIADSPAL--IDCAYFGSPKPEIE----------WFRGVKGSILRG-NEY 454
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYG------EPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A N+LG E P+ P K Q ++
Sbjct: 455 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQ 514
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
S+E + + P + + W K N+ E + G + ++ +
Sbjct: 515 ------------ASFECVIKHD---PTLIPTVIWLKDNN-ELPDDERFLVGKDNLTIMNV 558
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 559 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSI 615
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL------SRTTRNWALIVGLQP 461
++W P E I +I + ED E V++ S+TT + + L P
Sbjct: 616 ELSWVPGEENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGSQTT----VQLKLSP 665
Query: 462 DTKYYVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y +V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 666 YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLK 723
Query: 519 PSFEEEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 724 GFQSNGPGLQYKVSWRQKDVD 744
>gi|449275013|gb|EMC84019.1| Neuronal cell adhesion molecule [Columba livia]
Length = 1308
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 160/548 (29%), Positives = 249/548 (45%), Gaps = 52/548 (9%)
Query: 12 CNPEAAPKPKFVWKK--DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +PKP+ W K G+I+ G IF +NG L I +D +G Y+C A N G
Sbjct: 476 CAYFGSPKPEIEWFKGVKGSILR--GNEYIFHDNGTLEIPVAQKDSTGTYTCVARNELGK 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L V P+ + P I + + C + L IW + N
Sbjct: 534 IQNEVHLEV-KDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVIWLKD-----NDA 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVEG 178
L + E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 588 LPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYA 645
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + W G N PIT++ I + W +E V G +
Sbjct: 646 RPNPPFDLELTGQLERSVELSWIPGDENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGTQ 704
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+++ L P+ Y F+VIA NE+G +PS PS QY T + P + PS + G
Sbjct: 705 ---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 IGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVIV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F YE+KVQA+ND+G PE V S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVKV 469
L + +RG L G+++ YWK + + ++ R + + ++ GL+P + Y + V
Sbjct: 871 L--KTVRGHLQGYKVYYWKVQSLSRRSRRHVEKKILTFRGNKTFGMLPGLEPYSSYKLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + +T P P +K NPT +T + SP+ +I Y
Sbjct: 929 RVVNGKGEGPASPDKVFKTPEGVPSSP---SFLKITNPTLDSLTLEWGSPTHPNGILISY 985
Query: 530 KVRVWEVD 537
++ ++
Sbjct: 986 ILKFQPIN 993
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 242/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPNISWLANGVPIAIAPEDPSRKV-DGDTIIFSHVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I ++ Q+ A + LLD AY +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTTTNKLYQV--IADSPALLDCAYFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE I D G LEI A G Y CV ++ +GKI +
Sbjct: 483 KPEIEWFKGVKGSILRGNEY----IFHDNGTLEIPVAQKDSTGTYTCVARNELGKIQNEV 538
Query: 173 TVIVEGPPGLPG-------------GVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P + + + H ++ T+ W + P ++
Sbjct: 539 HLEVKDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVIWLKD-NDALPDDERFLVG 597
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 598 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 641
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDT 333
Y P P + G + +SW +P ++ N+P I Y+ +
Sbjct: 642 IIYARP-----NPPFDLELTGQLERSVELSW--IPGDENNSPITNFVIEYEDGLHEPGVW 694
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E V + + Y Y +V A+N++G P SE SA P
Sbjct: 695 HYQTEVPGTQTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--P 746
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW ++ + N G + +++ + ++D +E ++ +
Sbjct: 747 DENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVIVANVS 804
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 805 K--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 862
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 863 KVHWDPVPLKTVRGHLQGYKVYYWKV-QSLSRRSRRHVEKKILTFRGNKTFGMLPGLEPY 921
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F+ E
Sbjct: 922 SSYKLNVRVVNGKGEGP-ASPDKVFKTPE 949
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 204/557 (36%), Gaps = 72/557 (12%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y C A
Sbjct: 285 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N+ G + V P Y+ P + ++ + L C A+ +++ W NGV
Sbjct: 343 RNMLGSAHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLANGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + ++ + Y+C + G + V+ E P
Sbjct: 400 PIAIAP----EDPSRKVDGDTIIFSHVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 455
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 456 ILTTTNKLYQVIADSPAL--LDCAYFGSPKPEIE----------WFKGVKGSILRG-NEY 502
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A NELG + E P+ P Y+ R
Sbjct: 503 IFHDNGTLEIPVAQKDSTGTYTCVARNELGKIQNEVHLEVKDPTMIIKQPE---YKVIQR 559
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G +S+E + + + + W K ND E G + ++ +
Sbjct: 560 YG---------QVSFECIIKHDS---TLLPTVIWLKDNDALPDDERFL-VGKDNLTIMNV 606
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G ++
Sbjct: 607 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPFDLELTGQLERSV 663
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKY 465
++W P + I +I + ED E V++ V L+ P Y
Sbjct: 664 ELSWIPGDENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGTQTTVQLKLSPYVNY 717
Query: 466 YVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 718 SFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLKGFQS 775
Query: 523 EEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 776 NGPGLQYKVSWRQKDVD 792
>gi|284004976|ref|NP_001164836.1| neural cell adhesion molecule L1 precursor [Oryctolagus cuniculus]
gi|217418262|gb|ACK44266.1| L1 cell adhesion molecule isoform 2 precursor (predicted)
[Oryctolagus cuniculus]
Length = 1247
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 271/603 (44%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 433 AVEGSTAHLLCKAFGAPVPTVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ ++T C A + L
Sbjct: 493 QAANDQNNVTIMANLQVKEATQITQGPRSAIEKKGARVTFT--------CQASFDPSLQP 544
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL+EL ++ ++ G L I + ++D G Y CV + + ++ ++
Sbjct: 545 SITWRGDG-----RDLHELGDSDKYFLEAGRLVIHSLDYSDQGNYSCVASTELDEVESRA 599
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG ++V + H ++ + W+ + PI Y I +A W S
Sbjct: 600 QLLVVGSPGPVPQLEVSDHHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 659
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 660 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 705
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR E +
Sbjct: 706 EAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPVGTQGPWQEQI--- 762
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE +VVT +S ED PQV P+ + N
Sbjct: 763 --VSDPILVVSNTSTFVPYEIKVQAVNSQGKGPEPQVVTGYSGEDYPQVGPELEDVKILN 820
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V+W P++L + ++G L G+ + YW + + + ++ + A++
Sbjct: 821 SSTVLVSWLPVDLAQ--VKGHLRGYNVTYWWVGSQRKHSKRHVHKGHVVVPANTTSAILS 878
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GLQP + Y+++V A+N G GP SE T P P A+H++ + T++ + W+
Sbjct: 879 GLQPYSSYHLEVQAFNGRGLGPASELTFS-TPEGVPSH-PEALHLECQSDTSLKLHWK-- 934
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + + +P + L ++ +LSP RY ++ A +
Sbjct: 935 PPLSHNGVLTGYMLSYHPLGDGGQEQLSFDLPDPDLLTHNLTNLSPNMRYRFQLQATTRE 994
Query: 578 GDG 580
G G
Sbjct: 995 GPG 997
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 140/609 (22%), Positives = 233/609 (38%), Gaps = 56/609 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G V + C + P+P+ W+ +G + + + + ++G L++S D+ + C
Sbjct: 340 GPGETVRLDCQVQGRPQPEVTWRINGIPVDELPKDQKYRIQHGALILSNAQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPARI-LTGDNQTYMAVEGSTAHLLCKAF----- 446
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + + + E + D G L I + D G Y C + ++
Sbjct: 447 GAPVPTVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIMAN 506
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ P I R + H +
Sbjct: 507 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFD-PSLQPSITWRGDGRDL------HEL 558
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y + + L + +A EL E + +P P S
Sbjct: 559 G-DSDKYFLEAGRLVIHSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPQLEVS- 616
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E NAP Y I + K + +L K GN A ++
Sbjct: 617 -DHHLLKQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSATLK 673
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G + + +TW
Sbjct: 674 LSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITW 730
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P T + + + L+V Y +KV
Sbjct: 731 KPLRWMDWN------APQVQYRVQWRPVGTQGPWQEQIVSDPILVVSNTSTFVPYEIKVQ 784
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A N+ G+GPE + + PQ P +K +N +TV V+W V + + + GY
Sbjct: 785 AVNSQGKGPEPQVVTGYSGEDYPQVGPELEDVKILNSSTVLVSWLPVDLAQVKGHLRGYN 844
Query: 531 VRVWEVDQDMSRAN------DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W V + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 845 VTYWWVGSQRKHSKRHVHKGHVVVP-ANTTSAILSGLQPYSSYHLEVQAFNGRGLGPASE 903
Query: 585 PAITFQMGE 593
+TF E
Sbjct: 904 --LTFSTPE 910
>gi|426227601|ref|XP_004007906.1| PREDICTED: neuronal cell adhesion molecule isoform 1 [Ovis aries]
Length = 1180
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 260/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W KD GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W D
Sbjct: 515 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 566 HGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 626 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGT 684
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 685 QT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 908
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 909 VRVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTE 965
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 YTLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNISTRYKFYFYAQTAAGSGSQITEE 1024
Query: 586 AIT 588
AIT
Sbjct: 1025 AIT 1027
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 128/616 (20%), Positives = 230/616 (37%), Gaps = 76/616 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 360 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 418
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------W 117
+G + + VL PP+I +A N + A+ LLD A+ W
Sbjct: 419 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEW 469
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G+ ++ + N G LEI A G Y CV ++ +G + ++
Sbjct: 470 FKDAK--GSALREDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 524
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNV 228
P ++++ A +Q + + H + +I W + F V
Sbjct: 525 DP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV 577
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
++++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 578 DKDYLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGS 739
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 740 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 795
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+AG PE + + P P VH+ +N T V W V
Sbjct: 796 VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPLKSI 855
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ ++R + G+ + L P Y + V +
Sbjct: 856 RGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 915
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 916 GEGP-ASPDKVFNTPE 930
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|432859188|ref|XP_004069056.1| PREDICTED: neurofascin-like [Oryzias latipes]
Length = 1358
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 158/592 (26%), Positives = 266/592 (44%), Gaps = 43/592 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E + C +P P+ W K+G G GG + + NG+L I R+D G Y+C A
Sbjct: 470 ENNRTFLDCPFFGSPLPEHRWFKNGQGSGLDGGHYRTYLNGSLEIKRTRREDEGTYTCVA 529
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N+ G E++ L V P+ Q P + + C +++ L V WT +
Sbjct: 530 SNMLGKAENQVHLEVKE-PTRIVQAPVHQSAVRGTTARFDCKVNSDPTLPVTVTWTKDD- 587
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
+DL + D L I+N + DAG Y C+ KS + + S + V G P
Sbjct: 588 --KPLDLRW----RLKKDKDSLTISNINEGDAGTYTCMAKSAIDQDSVSARLTVLGRPDP 641
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVDRY 240
P + + + S + W G + PIT + + W W N++ +
Sbjct: 642 PMDLDLSDPAARSVRLTWIPGNDHNSPITGFLVQFEEDRWEPGRWQNLTS---------F 692
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+G + + L P+ Y+F+VIA N +G +PS PSP+Y T P P + G G +
Sbjct: 693 SGDLNSVVLQ-LSPYVNYQFRVIAINSVGQSDPSQPSPRYKTSGAAPDAIPRGLRGWGTR 751
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
++ I+WEPL ++N PN+ Y ++WR+K+ E + G + + + Y
Sbjct: 752 NDNMEITWEPLQDLERNGPNLQYHVWWRRKDSGE-----QWDSGTTPSSNYVVQNTDTYV 806
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
YE+++QA N+ G GPES VV +S ED P P+ + +ST V W + + +
Sbjct: 807 PYEIRIQASNEFGSGPESNVVIGYSGEDKPTEPPRQLQVSNVDSTKAQVKWKAVNM--SS 864
Query: 421 IRGRLIGHRIKYWKEDN-------PEETAVY-YLSRTTRNWALIVGLQPDTKYYVKVMAY 472
IRG +R+ Y ++ + EET + + ++ GL P +KY + ++
Sbjct: 865 IRGEFKEYRLYYSRKSSLVPGLVVKEETKNKGFYTTADEPSGILTGLVPFSKYKMSMVVA 924
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW-RYVSPSFEEEPIIGYKV 531
NN EGP S +E T R+ P I T+++ W R + P+ +IGYK+
Sbjct: 925 NNRFEGPPSN-MVEFTTREGVPDAPKFFKINRRTLDTLYLEWDRPLEPN---GILIGYKL 980
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDL-SPGKRYHMRVLAFSNGGDGRM 582
V+ ++ TI+ + + + + L RY + + A + G G +
Sbjct: 981 EYQAVNSSRP-SSPTILTIPHNVTKHTLRLPDRSTRYKLFLSALTQQGSGEV 1031
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 212/546 (38%), Gaps = 89/546 (16%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNII-GSGG-RRKIFENGNLLISPVSRDDSGIYSCT 61
EGG + C PKP W DG + GS R + ++ V S +Y C
Sbjct: 378 EGGR--LVCRANGKPKPTIQWFVDGEPLEGSNSVRHREMLGDTIIFRSVEIGSSAVYQCN 435
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI----- 116
A+N HG + + VL L P + +N ++ + LD +
Sbjct: 436 ASNQHGYLLANAFVSVL-------DLSP--MMLGPKNQLIQVIENNRTFLDCPFFGSPLP 486
Query: 117 ---WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NG G +D T G LEI D G Y CV + +GK +
Sbjct: 487 EHRWFKNGQGSG-LDGGHYRT----YLNGSLEIKRTRREDEGTYTCVASNMLGKAENQVH 541
Query: 174 VIVEGPPGL-PGGVQVVEVHKTSA--------------TIQWTDGATNGRPITHYKIIAR 218
+ V+ P + V V T+A T+ WT + +P+ + +
Sbjct: 542 LEVKEPTRIVQAPVHQSAVRGTTARFDCKVNSDPTLPVTVTWT---KDDKPLDLRWRLKK 598
Query: 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
+ T N++E G YT +++I+ V + V LG +P
Sbjct: 599 DKDSLTISNINEGDAGT----YTCMAKSAIDQDSV---SARLTV-----LGRPDP----- 641
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
P D P+ + ++W +P N+P + + + + + +
Sbjct: 642 ----PMDLDLSDPA--------ARSVRLTW--IPGNDHNSPITGFLVQFEEDRWEPGRWQ 687
Query: 339 TLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQG 396
L + G++ V+++ Y Y+ +V AIN VG S+ + ++ P P+G
Sbjct: 688 NLTSFSGDLNSVVLQLSP---YVNYQFRVIAINSVGQSDPSQPSPRYKTSGAAPDAIPRG 744
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+ G + + +TW P++ + N G + + + + ++D+ E+ + S TT + +
Sbjct: 745 LRGWGTRNDNMEITWEPLQDLERN--GPNLQYHVWWRRKDSGEQ----WDSGTTPSSNYV 798
Query: 457 VGLQPDT--KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
V DT Y +++ A N G GPES + + P +PP + + ++ T V W
Sbjct: 799 VQ-NTDTYVPYEIRIQASNEFGSGPESNVVIGYSGEDKPTEPPRQLQVSNVDSTKAQVKW 857
Query: 515 RYVSPS 520
+ V+ S
Sbjct: 858 KAVNMS 863
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLIS--PVSR--DDSGIYS 59
N+ I C + P P F+W+K+G G ++ +G L I P R D G Y
Sbjct: 84 NIIIECEAKGNPTPTFLWRKNGKFFNFGNDPRVTMQKHSGTLKIGFRPGERPEDYEGEYQ 143
Query: 60 CTATNVHGMDESKGRLI 76
C A+N HG+ S L+
Sbjct: 144 CFASNDHGVAMSNKILL 160
>gi|53729306|ref|NP_001004493.1| neurofascin isoform 2 precursor [Gallus gallus]
Length = 1272
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 273/606 (45%), Gaps = 64/606 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 587
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 588 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 638
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 639 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 694
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 748
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 749 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 805
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED P+ AP V R NSTAI +TW
Sbjct: 806 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWT 862
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYY 466
+ L + I+G+L +R +W++ + + R RN ++ L P + Y
Sbjct: 863 RVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYK 920
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++++ N G+GP SE T P P + I+ N ++++ W + P +
Sbjct: 921 LEMVVTNGRGDGPRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVL 977
Query: 527 IGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM-- 582
GY +R + S+ T++ N + P RY + A + GDG +
Sbjct: 978 TGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDGEVIV 1035
Query: 583 -SSPAI 587
SPA+
Sbjct: 1036 EESPAL 1041
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 448
>gi|63660|emb|CAA46330.1| neurofascin [Gallus gallus]
Length = 1272
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 273/606 (45%), Gaps = 64/606 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 587
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 588 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 638
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 639 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 694
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 748
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 749 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 805
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED P+ AP V R NSTAI +TW
Sbjct: 806 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWT 862
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYY 466
+ L + I+G+L +R +W++ + + R RN ++ L P + Y
Sbjct: 863 RVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYK 920
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++++ N G+GP SE T P P + I+ N ++++ W + P +
Sbjct: 921 LEMVVTNGRGDGPRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVL 977
Query: 527 IGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM-- 582
GY +R + S+ T++ N + P RY + A + GDG +
Sbjct: 978 TGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDGEVIV 1035
Query: 583 -SSPAI 587
SPA+
Sbjct: 1036 EESPAL 1041
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 448
>gi|426227609|ref|XP_004007910.1| PREDICTED: neuronal cell adhesion molecule isoform 5 [Ovis aries]
Length = 1211
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 260/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W KD GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W D
Sbjct: 534 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------D 584
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 585 HGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 644
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 645 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGT 703
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 704 QT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVE 754
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 755 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 811
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 812 PTF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPV 869
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 870 PL--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 927
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 928 VRVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTE 984
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 985 YTLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNISTRYKFYFYAQTAAGSGSQITEE 1043
Query: 586 AIT 588
AIT
Sbjct: 1044 AIT 1046
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 128/616 (20%), Positives = 230/616 (37%), Gaps = 76/616 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 379 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 437
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------W 117
+G + + VL PP+I +A N + A+ LLD A+ W
Sbjct: 438 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEW 488
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G+ ++ + N G LEI A G Y CV ++ +G + ++
Sbjct: 489 FKDAK--GSALREDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 543
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNV 228
P ++++ A +Q + + H + +I W + F V
Sbjct: 544 DP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV 596
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
++++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 597 DKDYLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 --NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGT 703
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 704 QTTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGS 758
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 759 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 814
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+AG PE + + P P VH+ +N T V W V
Sbjct: 815 VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPLKSI 874
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ ++R + G+ + L P Y + V +
Sbjct: 875 RGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 934
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 935 GEGP-ASPDKVFNTPE 949
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|462740|sp|P35331.1|NRCAM_CHICK RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM;
AltName: Full=Neuronal surface protein Bravo;
Short=gBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1284
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 249/549 (45%), Gaps = 50/549 (9%)
Query: 10 IFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C +PKP+ W + G+I+ G +NG L I +D +G Y+C A N G
Sbjct: 450 IDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLG 508
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+++ +L V P+ + P I C + L IW + N
Sbjct: 509 KTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NN 562
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVE 177
+L + E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 563 ELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIY 620
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + W G N PIT++ I + W +E V G
Sbjct: 621 ARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGS 679
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+++ L P+ Y F+VIA NE+G +PS PS QY T + P + PS +
Sbjct: 680 H---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQ 730
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 731 GIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGT 787
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F YE+KVQA+ND+G PE V S ED+P VAP V NST V W+P+
Sbjct: 788 PTF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPV 845
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVK 468
L +++RG L G+++ YWK + + ++ R + + ++ GL+P + Y +
Sbjct: 846 PL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLN 903
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + +T P PPS + I NPT +T + SP+ +
Sbjct: 904 VRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI--TNPTLDSLTLEWGSPTHPNGVLTS 960
Query: 529 YKVRVWEVD 537
Y ++ ++
Sbjct: 961 YILKFQPIN 969
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 243/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 351 GEDG--TLICRANGNPKPSISWLTNGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQ 407
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A++ Q+ A + L+D AY +
Sbjct: 408 CNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IADSPALIDCAYFGSP 458
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE + D G LEI A G Y CV ++ +GK +
Sbjct: 459 KPEIEWFRGVKGSILRGNEY----VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSA---------------TIQWTDGATNGRPITHYKIIA 217
+ V+ P + Q + +++ T+ W N P ++
Sbjct: 515 QLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-NNELPDDERFLVG 573
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 574 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDT 333
Y P P + G + +SW +P E+ N+P I Y+ +
Sbjct: 618 IIYARP-----NPPLDLELTGQLERSIELSW--VPGEENNSPITNFVIEYEDGLHEPGVW 670
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E + V + + Y Y +V A+N++G P SE SA P
Sbjct: 671 HYQTEVPGSHTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--P 722
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW ++ + N G + +++ + ++D +E ++ +
Sbjct: 723 DENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVVVANVS 780
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 781 K--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 838
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 839 KVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPY 897
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F+ E
Sbjct: 898 SSYKLNVRVVNGKGEGP-ASPDKVFKTPE 925
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 203/557 (36%), Gaps = 72/557 (12%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y CTA
Sbjct: 261 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCTA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 319 RNTLGSTHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 376 PIAIAP----EDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 431
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 432 ILTPANKLYQVIADSPAL--IDCAYFGSPKPEIE----------WFRGVKGSILRG-NEY 478
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYG------EPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A N+LG E P+ P K Q ++
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQ 538
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
S+E + + P + + W K N+ E + G + ++ +
Sbjct: 539 ------------ASFECVIKHD---PTLIPTVIWLKDNN-ELPDDERFLVGKDNLTIMNV 582
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 583 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSI 639
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT--RNWALIVGLQPDTKY 465
++W P E I +I + ED E V++ + + + L P Y
Sbjct: 640 ELSWVPGEENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNY 693
Query: 466 YVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 694 SFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLKGFQS 751
Query: 523 EEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 752 NGPGLQYKVSWRQKDVD 768
>gi|426227605|ref|XP_004007908.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Ovis aries]
Length = 1256
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 260/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W KD GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W D
Sbjct: 528 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------D 578
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 579 HGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 638
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 639 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGT 697
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 698 QT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVE 748
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 749 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 805
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 806 PTF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPV 863
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 864 PL--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 921
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 922 VRVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTE 978
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 979 YTLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNISTRYKFYFYAQTAAGSGSQITEE 1037
Query: 586 AIT 588
AIT
Sbjct: 1038 AIT 1040
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 128/616 (20%), Positives = 230/616 (37%), Gaps = 76/616 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 373 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 431
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------W 117
+G + + VL PP+I +A N + A+ LLD A+ W
Sbjct: 432 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEW 482
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G+ ++ + N G LEI A G Y CV ++ +G + ++
Sbjct: 483 FKDAK--GSALREDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 537
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNV 228
P ++++ A +Q + + H + +I W + F V
Sbjct: 538 DP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV 590
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
++++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 591 DKDYLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP--- 641
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 642 --NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGT 697
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 698 QTTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGS 752
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 753 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 808
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+AG PE + + P P VH+ +N T V W V
Sbjct: 809 VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPLKSI 868
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ ++R + G+ + L P Y + V +
Sbjct: 869 RGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 928
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 929 GEGP-ASPDKVFNTPE 943
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|148223934|ref|NP_001085487.1| neuronal cell adhesion molecule precursor [Xenopus laevis]
gi|49117906|gb|AAH72835.1| MGC80200 protein [Xenopus laevis]
Length = 1177
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 166/597 (27%), Positives = 262/597 (43%), Gaps = 52/597 (8%)
Query: 10 IFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
+ C +PKP+ W K G+I+ G +NG L I +D SG Y+C ATN G
Sbjct: 462 LHCPFFGSPKPEIKWFKGVHGSILHGNGYV-FHDNGTLEIPVAQKDSSGNYTCVATNTFG 520
Query: 68 MDESKGRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
S +I L P+ + P I + + C + L +W +
Sbjct: 521 ---SVKDMIGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVLWLKD----- 572
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
D L + G L I N + D G Y CV + + +S + V P P
Sbjct: 573 --DSELLNDERFKMTKGHLTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVDRPNHPFD 630
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGR 243
+++ + H+ S + W G N PIT++ I + W H K
Sbjct: 631 LELTDHHERSVQLSWVPGDDNNSPITNFMIEYEDAMHDPGIW-----HFQAK-----VSG 680
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ + L P+ Y F+VIA NE+G +PS S QY T +P + PS I G G + +
Sbjct: 681 TQTTATLSLSPFVNYSFRVIAVNEIGSSDPSESSEQYMTKPAEPDKNPSGIKGVGTEPDN 740
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L I+WEP+ N P + YK+ WR+K+ D E+ S + NV +V F Y
Sbjct: 741 LVIAWEPIKGFDSNGPGLQYKVSWRQKDFDDEWTSIIV---ANVSKYIVSGTPTF--EPY 795
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
E+KVQA+ND+G P+ V+ +S ED+P AP V N+T V W +IR
Sbjct: 796 EIKVQALNDIGYAPDPSVIIGYSGEDLPMTAPSNVEVEVINNTLAKVQWE--SAPSTSIR 853
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDTKYYVKVMAYNNAG 476
G L G+R+ YWK +N + ++ + ++ ++ GL+P Y V V +N G
Sbjct: 854 GHLQGYRVYYWKAENQTKRNKRHMEKHMLSFHGNKTHGMLPGLEPFKSYIVNVRVFNGKG 913
Query: 477 EGPES-ERYLERTYRKAPQKPPSA-VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
EGP S ++Y E P+ PSA + + + T +T + P+ + Y +
Sbjct: 914 EGPPSTDKYFE-----TPEGVPSAPLKLDIVERTIDSLTLMWKPPAHPNGVLTQYTLIFQ 968
Query: 535 EVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ ++S + IP T + +L+ RY + A + G G +++ AIT
Sbjct: 969 SINATHELSPPVEITIPTNET-SLVLRNLNQSTRYKFYLYANTAVGPGIQITQEAIT 1024
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 15/173 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMD 69
C E P P+ W+K+ + +G R +EN N L I V+ D+G Y C N+ G
Sbjct: 281 CIAEGLPTPEIHWRKESADLPAG--RVFYENFNKTLRIIDVTEADAGKYKCIGRNILGTT 338
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
+ V P Y+ P I ++ + L C A + W NGV I
Sbjct: 339 HHIITVNVKSSP-YWISPPTNIVLSPGEDGSLICRASGNPTPSIT--WLINGVSI----- 390
Query: 130 NELETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
EL + + +DG + + Y+C V + G + V V P
Sbjct: 391 -ELAPTDASRRVDGDTIIFSKVQDGATAVYQCNVSNKYGYLLANAFVNVLAEP 442
>gi|45383994|ref|NP_990597.1| neuronal cell adhesion molecule precursor [Gallus gallus]
gi|63707|emb|CAA41391.1| Nr-CAM protein [Gallus gallus]
Length = 1268
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 249/549 (45%), Gaps = 50/549 (9%)
Query: 10 IFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C +PKP+ W + G+I+ G +NG L I +D +G Y+C A N G
Sbjct: 450 IDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLG 508
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+++ +L V P+ + P I C + L IW + N
Sbjct: 509 KTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NN 562
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVE 177
+L + E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 563 ELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIY 620
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + W G N PIT++ I + W +E V G
Sbjct: 621 ARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGS 679
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+++ L P+ Y F+VIA NE+G +PS PS QY T + P + PS +
Sbjct: 680 H---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQ 730
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 731 GIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGT 787
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F YE+KVQA+ND+G PE V S ED+P VAP V NST V W+P+
Sbjct: 788 PTF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPV 845
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVK 468
L +++RG L G+++ YWK + + ++ R + + ++ GL+P + Y +
Sbjct: 846 PL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLN 903
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + +T P PPS + I NPT +T + SP+ +
Sbjct: 904 VRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI--TNPTLDSLTLEWGSPTHPNGVLTS 960
Query: 529 YKVRVWEVD 537
Y ++ ++
Sbjct: 961 YILKFQPIN 969
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 243/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 351 GEDG--TLICRANGNPKPSISWLTNGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQ 407
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A++ Q+ A + L+D AY +
Sbjct: 408 CNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IADSPALIDCAYFGSP 458
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE + D G LEI A G Y CV ++ +GK +
Sbjct: 459 KPEIEWFRGVKGSILRGNEY----VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSA---------------TIQWTDGATNGRPITHYKIIA 217
+ V+ P + Q + +++ T+ W N P ++
Sbjct: 515 QLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-NNELPDDERFLVG 573
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 574 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDT 333
Y P P + G + +SW +P E+ N+P I Y+ +
Sbjct: 618 IIYARP-----NPPLDLELTGQLERSIELSW--VPGEENNSPITNFVIEYEDGLHEPGVW 670
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E + V + + Y Y +V A+N++G P SE SA P
Sbjct: 671 HYQTEVPGSHTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--P 722
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW ++ + N G + +++ + ++D +E ++ +
Sbjct: 723 DENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVVVANVS 780
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 781 K--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 838
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 839 KVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPY 897
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F+ E
Sbjct: 898 SSYKLNVRVVNGKGEGP-ASPDKVFKTPE 925
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 203/557 (36%), Gaps = 72/557 (12%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y CTA
Sbjct: 261 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCTA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 319 RNTLGSTHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 376 PIAIAP----EDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 431
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 432 ILTPANKLYQVIADSPAL--IDCAYFGSPKPEIE----------WFRGVKGSILRG-NEY 478
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYG------EPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A N+LG E P+ P K Q ++
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQ 538
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
S+E + + P + + W K N+ E + G + ++ +
Sbjct: 539 ------------ASFECVIKHD---PTLIPTVIWLKDNN-ELPDDERFLVGKDNLTIMNV 582
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 583 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSI 639
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT--RNWALIVGLQPDTKY 465
++W P E I +I + ED E V++ + + + L P Y
Sbjct: 640 ELSWVPGEENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNY 693
Query: 466 YVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 694 SFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLKGFQS 751
Query: 523 EEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 752 NGPGLQYKVSWRQKDVD 768
>gi|426227607|ref|XP_004007909.1| PREDICTED: neuronal cell adhesion molecule isoform 4 [Ovis aries]
Length = 1192
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 169/603 (28%), Positives = 260/603 (43%), Gaps = 58/603 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W KD GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPAIEWFKDAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W D
Sbjct: 515 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLK--------D 565
Query: 129 LNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP-------- 179
EL + +D L + + + D G Y CV +T+ +S + V P
Sbjct: 566 HGELPSDGRFTVDKDYLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIY 625
Query: 180 --PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + WT G N PIT + I + W + +E V G
Sbjct: 626 DVPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQAE-VPGT 684
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ + + L P+ Y F+V+A N LG PS S QY T A +P + P+ +
Sbjct: 685 QT---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVE 735
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 736 GLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGT 792
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 793 PTF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPV 850
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y +
Sbjct: 851 PL--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN 908
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + T P P S +K +NPT +T + PS +
Sbjct: 909 VRVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTE 965
Query: 529 YKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSP 585
Y ++ ++ ++ D IP N + +L+ RY A + G G +++
Sbjct: 966 YTLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNISTRYKFYFYAQTAAGSGSQITEE 1024
Query: 586 AIT 588
AIT
Sbjct: 1025 AIT 1027
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 128/616 (20%), Positives = 230/616 (37%), Gaps = 76/616 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 360 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 418
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------W 117
+G + + VL PP+I +A N + A+ LLD A+ W
Sbjct: 419 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPAIEW 469
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ G+ ++ + N G LEI A G Y CV ++ +G + ++
Sbjct: 470 FKDAK--GSALREDIYVLHEN---GTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIK 524
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNV 228
P ++++ A +Q + + H + +I W + F V
Sbjct: 525 DP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVTWLKDHGELPSDGRFTV 577
Query: 229 S-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADK 286
++++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 578 DKDYLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP--- 628
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGN 345
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 --NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQAEVPGT 684
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 685 QTTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGS 739
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 740 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 795
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+AG PE + + P P VH+ +N T V W V
Sbjct: 796 VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPLKSI 855
Query: 523 EEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W+ ++R + G+ + L P Y + V +
Sbjct: 856 RGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGK 915
Query: 578 GDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 916 GEGP-ASPDKVFNTPE 930
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NSLGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|348552762|ref|XP_003462196.1| PREDICTED: neural cell adhesion molecule L1-like isoform 3 [Cavia
porcellus]
Length = 1247
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 257/602 (42%), Gaps = 57/602 (9%)
Query: 1 YAGEGGNVT-IFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
Y G G + C AP P W ++G + R + NG L I + +D+G Y
Sbjct: 430 YMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQANDTGRY 489
Query: 59 SCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
C A N D++ ++ + + Q P + C A + L +
Sbjct: 490 FCQAAN----DQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPSL 545
Query: 116 IWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W +G DL EL ++ ID G L I N + D G Y CV + + ++ + +
Sbjct: 546 TWRGDG-----RDLQELGDSDKYFIDDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQL 600
Query: 175 IVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTW 225
+V G PG V+V E H + + WT + I Y I +A W
Sbjct: 601 LVVGSPGPVPHVEVSERHLLKHSQVHLSWTPAEDHNAAIEKYDIEFEDKEMAPEKW---- 656
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
H +GK + S L P+ Y F+V A N+ G GEPS PS TP
Sbjct: 657 -----HSLGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEA 706
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + P + G G + ++ I+W+PL NAP + Y++ WR + +Q +T+ +
Sbjct: 707 APEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTQGPWQEQTVSD-- 764
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
VV S F YE+KVQA+N G GPE +V +S ED PQ +P+ + NS
Sbjct: 765 --SFLVVTNTSTF--EPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNS 820
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET------AVYYLSRTTRNWALIVG 458
TA V+W P+ L + ++G L G+ + YW +D + + +
Sbjct: 821 TASLVSWKPVALAQ--VKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVPANVTSVALSD 878
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L P + Y+V+V A+N G GP S+ E T P P A+H++ + T++ + W+
Sbjct: 879 LWPYSSYHVEVRAFNGRGAGPASKESFE-TPEGVPGH-PEALHLECQSATSLQLHWK--P 934
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
P + GY + +D + +P ++ +LSP RY ++ A + G
Sbjct: 935 PLSHNGVLTGYMLSYHPLDAGGEQQLSFPLPDPEMRTHNLTNLSPDLRYRFQLQATTRKG 994
Query: 579 DG 580
G
Sbjct: 995 PG 996
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 142/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +GN + + + ++ G L++S V D+ + C
Sbjct: 339 GPGETARLDCQAQGRPQPEITWRINGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQC 398
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--------AHRNLQLRCSAHTEELLD 112
A N HG ++ + Y QLP KI A R L C A +
Sbjct: 399 EARNRHGH-------LLANAYIYVVQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPS 451
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK------STVG 166
V ++ G + +E P N G L I + D G Y C + V
Sbjct: 452 VQWL-DEEGTTVLR---DERFFPYAN---GTLAIRDLQANDTGRYFCQAANDQNNATIVA 504
Query: 167 KISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG-RPITHYKIIARTNWNST 224
+ K T I +GP + +E + AT RP W
Sbjct: 505 NLQVKEATQITQGP------REAIEKKGSRATFTCQASFDPSLRP--------SLTWRGD 550
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
++ E +G + I+N L + +A EL E + +P
Sbjct: 551 GRDLQE--LGDSDKYFIDDGRLVIDN-LEYGDQGNYSCVASTELDEVEARAQLLVVGSPG 607
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEY 343
P+ S K + +SW P E NA Y I + K + +L K
Sbjct: 608 PVPHVEVSE--RHLLKHSQVHLSW--TPAEDHNAAIEKYDIEFEDKEMAPEKWHSLGKVP 663
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGF 402
GN +++ Y Y +V AIN GPG P T+ + E P+ P V G
Sbjct: 664 GNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGN 720
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG---- 458
+ + +TW P+ + N +++Y + P+ T + +T + L+V
Sbjct: 721 ETNNMVITWKPLRWMDWN------APQVQYRVQWRPQGTQGPWQEQTVSDSFLVVTNTST 774
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
+P Y +KV A N+ G+GPE + + + PQ P +K +N T V+W+ V+
Sbjct: 775 FEP---YEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNSTASLVSWKPVA 831
Query: 519 PSFEEEPIIGYKVRVWEVD------QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ + + GY V W D ++ ++P N + DL P YH+ V
Sbjct: 832 LAQVKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVP-ANVTSVALSDLWPYSSYHVEVR 890
Query: 573 AFSNGGDGRMS 583
AF+ G G S
Sbjct: 891 AFNGRGAGPAS 901
>gi|348552760|ref|XP_003462195.1| PREDICTED: neural cell adhesion molecule L1-like isoform 2 [Cavia
porcellus]
Length = 1252
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 257/602 (42%), Gaps = 57/602 (9%)
Query: 1 YAGEGGNVT-IFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
Y G G + C AP P W ++G + R + NG L I + +D+G Y
Sbjct: 435 YMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQANDTGRY 494
Query: 59 SCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
C A N D++ ++ + + Q P + C A + L +
Sbjct: 495 FCQAAN----DQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPSL 550
Query: 116 IWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W +G DL EL ++ ID G L I N + D G Y CV + + ++ + +
Sbjct: 551 TWRGDG-----RDLQELGDSDKYFIDDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQL 605
Query: 175 IVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTW 225
+V G PG V+V E H + + WT + I Y I +A W
Sbjct: 606 LVVGSPGPVPHVEVSERHLLKHSQVHLSWTPAEDHNAAIEKYDIEFEDKEMAPEKW---- 661
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
H +GK + S L P+ Y F+V A N+ G GEPS PS TP
Sbjct: 662 -----HSLGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEA 711
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + P + G G + ++ I+W+PL NAP + Y++ WR + +Q +T+ +
Sbjct: 712 APEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTQGPWQEQTVSD-- 769
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
VV S F YE+KVQA+N G GPE +V +S ED PQ +P+ + NS
Sbjct: 770 --SFLVVTNTSTF--EPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNS 825
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET------AVYYLSRTTRNWALIVG 458
TA V+W P+ L + ++G L G+ + YW +D + + +
Sbjct: 826 TASLVSWKPVALAQ--VKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVPANVTSVALSD 883
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L P + Y+V+V A+N G GP S+ E T P P A+H++ + T++ + W+
Sbjct: 884 LWPYSSYHVEVRAFNGRGAGPASKESFE-TPEGVPGH-PEALHLECQSATSLQLHWK--P 939
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
P + GY + +D + +P ++ +LSP RY ++ A + G
Sbjct: 940 PLSHNGVLTGYMLSYHPLDAGGEQQLSFPLPDPEMRTHNLTNLSPDLRYRFQLQATTRKG 999
Query: 579 DG 580
G
Sbjct: 1000 PG 1001
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 142/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +GN + + + ++ G L++S V D+ + C
Sbjct: 344 GPGETARLDCQAQGRPQPEITWRINGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--------AHRNLQLRCSAHTEELLD 112
A N HG ++ + Y QLP KI A R L C A +
Sbjct: 404 EARNRHGH-------LLANAYIYVVQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPS 456
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK------STVG 166
V ++ G + +E P N G L I + D G Y C + V
Sbjct: 457 VQWL-DEEGTTVLR---DERFFPYAN---GTLAIRDLQANDTGRYFCQAANDQNNATIVA 509
Query: 167 KISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG-RPITHYKIIARTNWNST 224
+ K T I +GP + +E + AT RP W
Sbjct: 510 NLQVKEATQITQGP------REAIEKKGSRATFTCQASFDPSLRP--------SLTWRGD 555
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
++ E +G + I+N L + +A EL E + +P
Sbjct: 556 GRDLQE--LGDSDKYFIDDGRLVIDN-LEYGDQGNYSCVASTELDEVEARAQLLVVGSPG 612
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEY 343
P+ S K + +SW P E NA Y I + K + +L K
Sbjct: 613 PVPHVEVSE--RHLLKHSQVHLSW--TPAEDHNAAIEKYDIEFEDKEMAPEKWHSLGKVP 668
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGF 402
GN +++ Y Y +V AIN GPG P T+ + E P+ P V G
Sbjct: 669 GNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGN 725
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG---- 458
+ + +TW P+ + N +++Y + P+ T + +T + L+V
Sbjct: 726 ETNNMVITWKPLRWMDWN------APQVQYRVQWRPQGTQGPWQEQTVSDSFLVVTNTST 779
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
+P Y +KV A N+ G+GPE + + + PQ P +K +N T V+W+ V+
Sbjct: 780 FEP---YEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNSTASLVSWKPVA 836
Query: 519 PSFEEEPIIGYKVRVWEVD------QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ + + GY V W D ++ ++P N + DL P YH+ V
Sbjct: 837 LAQVKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVP-ANVTSVALSDLWPYSSYHVEVR 895
Query: 573 AFSNGGDGRMS 583
AF+ G G S
Sbjct: 896 AFNGRGAGPAS 906
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELE 133
V+ P EQ PP++ + ++ L+C A + +V + W +GV + + E
Sbjct: 31 VMEPPVITEQSPPRLVVFPTDDISLKCEARGKP--EVQFRWMKDGVHFRPSEELGVTVHE 88
Query: 134 TPNINIDGGLLEITNASFAD--AGEYECVVKSTVG-KISTKTTVIVEGPPGLP 183
TP+ G N SFA G Y C + +G +S + ++ EG P P
Sbjct: 89 TPH---SGSFTITGNNSFAQRFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWP 138
>gi|348552758|ref|XP_003462194.1| PREDICTED: neural cell adhesion molecule L1-like isoform 1 [Cavia
porcellus]
Length = 1256
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 257/602 (42%), Gaps = 57/602 (9%)
Query: 1 YAGEGGNVT-IFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
Y G G + C AP P W ++G + R + NG L I + +D+G Y
Sbjct: 435 YMGVAGRTAYLLCKAFGAPVPSVQWLDEEGTTVLRDERFFPYANGTLAIRDLQANDTGRY 494
Query: 59 SCTATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
C A N D++ ++ + + Q P + C A + L +
Sbjct: 495 FCQAAN----DQNNATIVANLQVKEATQITQGPREAIEKKGSRATFTCQASFDPSLRPSL 550
Query: 116 IWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W +G DL EL ++ ID G L I N + D G Y CV + + ++ + +
Sbjct: 551 TWRGDG-----RDLQELGDSDKYFIDDGRLVIDNLEYGDQGNYSCVASTELDEVEARAQL 605
Query: 175 IVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTW 225
+V G PG V+V E H + + WT + I Y I +A W
Sbjct: 606 LVVGSPGPVPHVEVSERHLLKHSQVHLSWTPAEDHNAAIEKYDIEFEDKEMAPEKW---- 661
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
H +GK + S L P+ Y F+V A N+ G GEPS PS TP
Sbjct: 662 -----HSLGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPPSETVVTPEA 711
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYG 344
P + P + G G + ++ I+W+PL NAP + Y++ WR + +Q +T+ +
Sbjct: 712 APEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTQGPWQEQTVSD-- 769
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
VV S F YE+KVQA+N G GPE +V +S ED PQ +P+ + NS
Sbjct: 770 --SFLVVTNTSTF--EPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNS 825
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET------AVYYLSRTTRNWALIVG 458
TA V+W P+ L + ++G L G+ + YW +D + + +
Sbjct: 826 TASLVSWKPVALAQ--VKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVPANVTSVALSD 883
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L P + Y+V+V A+N G GP S+ E T P P A+H++ + T++ + W+
Sbjct: 884 LWPYSSYHVEVRAFNGRGAGPASKESFE-TPEGVPGH-PEALHLECQSATSLQLHWK--P 939
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
P + GY + +D + +P ++ +LSP RY ++ A + G
Sbjct: 940 PLSHNGVLTGYMLSYHPLDAGGEQQLSFPLPDPEMRTHNLTNLSPDLRYRFQLQATTRKG 999
Query: 579 DG 580
G
Sbjct: 1000 PG 1001
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 142/611 (23%), Positives = 230/611 (37%), Gaps = 78/611 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +GN + + + ++ G L++S V D+ + C
Sbjct: 344 GPGETARLDCQAQGRPQPEITWRINGNRMEELDKDQKYQIHRGALILSNVQPGDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--------AHRNLQLRCSAHTEELLD 112
A N HG ++ + Y QLP KI A R L C A +
Sbjct: 404 EARNRHGH-------LLANAYIYVVQLPAKILTVDNQTYMGVAGRTAYLLCKAFGAPVPS 456
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK------STVG 166
V ++ G + +E P N G L I + D G Y C + V
Sbjct: 457 VQWL-DEEGTTVLR---DERFFPYAN---GTLAIRDLQANDTGRYFCQAANDQNNATIVA 509
Query: 167 KISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG-RPITHYKIIARTNWNST 224
+ K T I +GP + +E + AT RP W
Sbjct: 510 NLQVKEATQITQGP------REAIEKKGSRATFTCQASFDPSLRP--------SLTWRGD 555
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
++ E +G + I+N L + +A EL E + +P
Sbjct: 556 GRDLQE--LGDSDKYFIDDGRLVIDN-LEYGDQGNYSCVASTELDEVEARAQLLVVGSPG 612
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEY 343
P+ S K + +SW P E NA Y I + K + +L K
Sbjct: 613 PVPHVEVSE--RHLLKHSQVHLSW--TPAEDHNAAIEKYDIEFEDKEMAPEKWHSLGKVP 668
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGF 402
GN +++ Y Y +V AIN GPG P T+ + E P+ P V G
Sbjct: 669 GNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPPSETVVTPEAAPEKNPVDVKGEGN 725
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG---- 458
+ + +TW P+ + N +++Y + P+ T + +T + L+V
Sbjct: 726 ETNNMVITWKPLRWMDWN------APQVQYRVQWRPQGTQGPWQEQTVSDSFLVVTNTST 779
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
+P Y +KV A N+ G+GPE + + + PQ P +K +N T V+W+ V+
Sbjct: 780 FEP---YEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEKVKALNSTASLVSWKPVA 836
Query: 519 PSFEEEPIIGYKVRVWEVD------QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ + + GY V W D ++ ++P N + DL P YH+ V
Sbjct: 837 LAQVKGHLRGYNVTYWWQDGQRMHGKEHGYGKHVVVP-ANVTSVALSDLWPYSSYHVEVR 895
Query: 573 AFSNGGDGRMS 583
AF+ G G S
Sbjct: 896 AFNGRGAGPAS 906
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GNMDLNELE 133
V+ P EQ PP++ + ++ L+C A + +V + W +GV + + E
Sbjct: 31 VMEPPVITEQSPPRLVVFPTDDISLKCEARGKP--EVQFRWMKDGVHFRPSEELGVTVHE 88
Query: 134 TPNINIDGGLLEITNASFAD--AGEYECVVKSTVG-KISTKTTVIVEGPPGLP 183
TP+ G N SFA G Y C + +G +S + ++ EG P P
Sbjct: 89 TPH---SGSFTITGNNSFAQRFQGVYRCFASNQLGTAMSHEIQLMAEGAPKWP 138
>gi|347964368|ref|XP_003437079.1| AGAP000720-PB [Anopheles gambiae str. PEST]
gi|333467499|gb|EGK96582.1| AGAP000720-PB [Anopheles gambiae str. PEST]
Length = 1271
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 256/587 (43%), Gaps = 41/587 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NVT+ C APKP+ W ++ + +GGR + +G+L I V DD+G Y+C A N
Sbjct: 456 NVTMTCRVFGAPKPQVKWLRNDREL-TGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNL 514
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + G LIV + P A + RC+A + L++ W G I
Sbjct: 515 GSKSASGELIVKER-TVINDPPQDYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEII-- 571
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D E + I L I+ D G Y C+ ++ + ++ T+ V P P +
Sbjct: 572 -DF-ENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATLTVMDRPN-PPTL 628
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV-SEHVIGKEVDRYTGRKE 245
V A I+W N PI +Y I T++ ++V S+ V G +
Sbjct: 629 TRVNCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVLSDDVPGTDF-------- 680
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
A N PW+ Y F+VIA N++G PS S T + PY+ P + G G +L
Sbjct: 681 AWTVNT-TPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNLEGEGTTPTNLV 739
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I W PL + NAP ++Y+++WR+ E+ S ++++ V +P+ +T Y V
Sbjct: 740 IKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGLPT---FTRYSV 796
Query: 365 KVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
KV A+ND G GP + +S ED P AP + TA ++WNP+ E+
Sbjct: 797 KVVALNDRGEANSGPWE--IMAYSGEDTPLDAPANFTLIQVTGPTAAILSWNPV--TPES 852
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+RG G++I+ W E + EE L AL+ PD Y +++AYN GP
Sbjct: 853 LRGHFKGYKIQTWTEADGEENLREILITADSKQALVTDFVPDATNYARILAYNGRYNGPA 912
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P+ P+ + P + R+ P + GY++ EV
Sbjct: 913 STTLSFDT----PEGVPNTIQALEAYPLGSSAFLLRWKKPLQPNGKLTGYRIYYEEVKGT 968
Query: 540 -----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
M R P L+A + L P +Y + V+A + G+G+
Sbjct: 969 TVGPRMEREPHISDPA--VLEAKLGRLKPAAKYRIHVVATTKAGEGQ 1013
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 69/187 (36%), Gaps = 17/187 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYS 59
A EG C PKP +W +G I G R+I + ++ IS + + D+G Y
Sbjct: 358 AAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVSQGNARRIVGSSSIYISKLQKSDTGNYG 417
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G L VL P + RN+ + C V ++
Sbjct: 418 CNATNSLGYVYKDVYLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGAPKPQVKWLRND 477
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV------KSTVGKISTKTT 173
+ G + G L I + F DAGEY C KS G++ K
Sbjct: 478 RELTGGRYQ---------TMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVKER 528
Query: 174 VIVEGPP 180
++ PP
Sbjct: 529 TVINDPP 535
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A +G + +FC P P+ VW K+G I + + G +L I VS +D+G Y+C
Sbjct: 266 ALKGKQIELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTC 325
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S + ++ Y+ P + A + +C A ++ +W HN
Sbjct: 326 EVSNGVGQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNI--MWIHN 383
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G +I D+++ I + + I+ +D G Y C +++G +
Sbjct: 384 GKQI---DVSQGNARRI-VGSSSIYISKLQKSDTGNYGCNATNSLGYV 427
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 200/540 (37%), Gaps = 94/540 (17%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI 57
A G VT CN A + W G II + + + +L+IS D+G
Sbjct: 540 AEAGTTVTFRCNAIADSSLELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGT 599
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y+C A + L V+ P+ PP +T ++ C ++ W
Sbjct: 600 YTCLARTDLDEVMANATLTVMDRPN-----PPTLT-------RVNCKGKVAQIE-----W 642
Query: 118 THNGVR---IGN--MDLNELETPNI------NIDGGLLEIT-NASFADAGEYECVVKSTV 165
NG I N ++ N TP+ ++ G T N + + + + + V
Sbjct: 643 ISNGDNRSPILNYIIEYNTSFTPDTYDVLSDDVPGTDFAWTVNTTPWNNYTFRVIAVNKV 702
Query: 166 GK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT--NGRPITHYK 214
G+ +T+++V + P L G T+ I+W A + P HY+
Sbjct: 703 GRSLPSGHSDVCTTESSVPYKNPDNLEGE----GTTPTNLVIKWRPLAQVDHNAPGLHYR 758
Query: 215 IIARTN-----WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
+ R + WNS D R+ + L ++ Y KV+A N+ G
Sbjct: 759 VYWRRDIPGAEWNS-------------ADVRDWRQSSYTVEGLPTFTRYSVKVVALNDRG 805
Query: 270 YGEPSSPSPQYNTPADKPYQAPS-----RIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 324
+ D P AP+ ++ G I +SW P+ E YK
Sbjct: 806 EANSGPWEIMAYSGEDTPLDAPANFTLIQVTGPTAAI----LSWNPVTPESLRGHFKGYK 861
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--YTEYEVKVQAINDVGPGPESEVVT 382
I + D E E L+E + + ++F T Y ++ A N GP S ++
Sbjct: 862 IQTWTEADGE---ENLREILITADSKQALVTDFVPDATNY-ARILAYNGRYNGPASTTLS 917
Query: 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDN---- 437
+ E +P Q + + S+A + W P++ G+L G+RI Y +
Sbjct: 918 FDTPEGVPNTI-QALEAYPLGSSAFLLRWKKPLQ-----PNGKLTGYRIYYEEVKGTTVG 971
Query: 438 PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP 497
P ++S A + L+P KY + V+A AGEG + Y+ER PP
Sbjct: 972 PRMEREPHISDPAVLEAKLGRLKPAAKYRIHVVATTKAGEG--QDFYIERATSSGLGLPP 1029
>gi|347964370|ref|XP_311259.5| AGAP000720-PA [Anopheles gambiae str. PEST]
gi|333467498|gb|EAA45046.5| AGAP000720-PA [Anopheles gambiae str. PEST]
Length = 1260
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 164/587 (27%), Positives = 256/587 (43%), Gaps = 41/587 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NVT+ C APKP+ W ++ + +GGR + +G+L I V DD+G Y+C A N
Sbjct: 456 NVTMTCRVFGAPKPQVKWLRNDREL-TGGRYQTMPSGDLFIRDVKFDDAGEYTCHAVNNL 514
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G + G LIV + P A + RC+A + L++ W G I
Sbjct: 515 GSKSASGELIVKER-TVINDPPQDYEAEAGTTVTFRCNAIADSSLELTIEWLTKGEII-- 571
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D E + I L I+ D G Y C+ ++ + ++ T+ V P P +
Sbjct: 572 -DF-ENQPRFIRTSDNSLMISKTIELDTGTYTCLARTDLDEVMANATLTVMDRPN-PPTL 628
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV-SEHVIGKEVDRYTGRKE 245
V A I+W N PI +Y I T++ ++V S+ V G +
Sbjct: 629 TRVNCKGKVAQIEWISNGDNRSPILNYIIEYNTSFTPDTYDVLSDDVPGTDF-------- 680
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
A N PW+ Y F+VIA N++G PS S T + PY+ P + G G +L
Sbjct: 681 AWTVNT-TPWNNYTFRVIAVNKVGRSLPSGHSDVCTTESSVPYKNPDNLEGEGTTPTNLV 739
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I W PL + NAP ++Y+++WR+ E+ S ++++ V +P+ +T Y V
Sbjct: 740 IKWRPLAQVDHNAPGLHYRVYWRRDIPGAEWNSADVRDWRQSSYTVEGLPT---FTRYSV 796
Query: 365 KVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIREN 420
KV A+ND G GP + +S ED P AP + TA ++WNP+ E+
Sbjct: 797 KVVALNDRGEANSGPWE--IMAYSGEDTPLDAPANFTLIQVTGPTAAILSWNPV--TPES 852
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+RG G++I+ W E + EE L AL+ PD Y +++AYN GP
Sbjct: 853 LRGHFKGYKIQTWTEADGEENLREILITADSKQALVTDFVPDATNYARILAYNGRYNGPA 912
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P+ P+ + P + R+ P + GY++ EV
Sbjct: 913 STTLSFDT----PEGVPNTIQALEAYPLGSSAFLLRWKKPLQPNGKLTGYRIYYEEVKGT 968
Query: 540 -----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
M R P L+A + L P +Y + V+A + G+G+
Sbjct: 969 TVGPRMEREPHISDPA--VLEAKLGRLKPAAKYRIHVVATTKAGEGQ 1013
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 69/187 (36%), Gaps = 17/187 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYS 59
A EG C PKP +W +G I G R+I + ++ IS + + D+G Y
Sbjct: 358 AAEGETAEFKCEAAGNPKPNIMWIHNGKQIDVSQGNARRIVGSSSIYISKLQKSDTGNYG 417
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G L VL P + RN+ + C V ++
Sbjct: 418 CNATNSLGYVYKDVYLNVLALAPEITDPPKREFTVDQRNVTMTCRVFGAPKPQVKWLRND 477
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV------KSTVGKISTKTT 173
+ G + G L I + F DAGEY C KS G++ K
Sbjct: 478 RELTGGRYQ---------TMPSGDLFIRDVKFDDAGEYTCHAVNNLGSKSASGELIVKER 528
Query: 174 VIVEGPP 180
++ PP
Sbjct: 529 TVINDPP 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A +G + +FC P P+ VW K+G I + + G +L I VS +D+G Y+C
Sbjct: 266 ALKGKQIELFCIYGGTPLPETVWTKNGRAIVWNDKIQQDNYGKSLKIRRVSSEDAGTYTC 325
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S + ++ Y+ P + A + +C A ++ +W HN
Sbjct: 326 EVSNGVGQADSYSINLAVNAVPYFTVEPEIVNAAEGETAEFKCEAAGNPKPNI--MWIHN 383
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
G +I D+++ I + + I+ +D G Y C +++G +
Sbjct: 384 GKQI---DVSQGNARRI-VGSSSIYISKLQKSDTGNYGCNATNSLGYV 427
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 200/540 (37%), Gaps = 94/540 (17%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGI 57
A G VT CN A + W G II + + + +L+IS D+G
Sbjct: 540 AEAGTTVTFRCNAIADSSLELTIEWLTKGEIIDFENQPRFIRTSDNSLMISKTIELDTGT 599
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y+C A + L V+ P+ PP +T ++ C ++ W
Sbjct: 600 YTCLARTDLDEVMANATLTVMDRPN-----PPTLT-------RVNCKGKVAQIE-----W 642
Query: 118 THNGVR---IGN--MDLNELETPNI------NIDGGLLEIT-NASFADAGEYECVVKSTV 165
NG I N ++ N TP+ ++ G T N + + + + + V
Sbjct: 643 ISNGDNRSPILNYIIEYNTSFTPDTYDVLSDDVPGTDFAWTVNTTPWNNYTFRVIAVNKV 702
Query: 166 GK---------ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT--NGRPITHYK 214
G+ +T+++V + P L G T+ I+W A + P HY+
Sbjct: 703 GRSLPSGHSDVCTTESSVPYKNPDNLEGE----GTTPTNLVIKWRPLAQVDHNAPGLHYR 758
Query: 215 IIARTN-----WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
+ R + WNS D R+ + L ++ Y KV+A N+ G
Sbjct: 759 VYWRRDIPGAEWNS-------------ADVRDWRQSSYTVEGLPTFTRYSVKVVALNDRG 805
Query: 270 YGEPSSPSPQYNTPADKPYQAPS-----RIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 324
+ D P AP+ ++ G I +SW P+ E YK
Sbjct: 806 EANSGPWEIMAYSGEDTPLDAPANFTLIQVTGPTAAI----LSWNPVTPESLRGHFKGYK 861
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--YTEYEVKVQAINDVGPGPESEVVT 382
I + D E E L+E + + ++F T Y ++ A N GP S ++
Sbjct: 862 IQTWTEADGE---ENLREILITADSKQALVTDFVPDATNY-ARILAYNGRYNGPASTTLS 917
Query: 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDN---- 437
+ E +P Q + + S+A + W P++ G+L G+RI Y +
Sbjct: 918 FDTPEGVPNTI-QALEAYPLGSSAFLLRWKKPLQ-----PNGKLTGYRIYYEEVKGTTVG 971
Query: 438 PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP 497
P ++S A + L+P KY + V+A AGEG + Y+ER PP
Sbjct: 972 PRMEREPHISDPAVLEAKLGRLKPAAKYRIHVVATTKAGEG--QDFYIERATSSGLGLPP 1029
>gi|410899607|ref|XP_003963288.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Takifugu rubripes]
Length = 1314
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 271/594 (45%), Gaps = 45/594 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G +V + C+ +P P W + GGR +NG+L I V ++D G Y C A
Sbjct: 485 QGADVVMNCSVFGSPPPTVSWSRGATQETIEGGRFFALQNGSLQIIGVEKEDGGKYVCVA 544
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY--IWTHN 120
N G L V P+ P + + QL C A ++ L ++ +W +
Sbjct: 545 LNAEGKSAVSAMLEV-KDPTRIISRPQDAEVVSGTTAQLNCLAEYDKSLQDSFELVWRKD 603
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G ++ L E +DG +L+I N +D G Y CV ++++ + + + V P
Sbjct: 604 G---EDIPLAVQENSRHGVDGAVLQIINVDLSDNGLYTCVARTSLDEENATALLTVLDVP 660
Query: 181 GLPGGVQVVEVHK-TSATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVD 238
P +++ E+ + ++ W G+ + +T + + + W + + V G +
Sbjct: 661 DAPLKLEISEIRSPRNISLSWVPGSDHNSSVTEFVVEYEESQWEPGRWRDFQRVPGNQ-- 718
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
A+ L Y+F+V A N +G G PS P+ ++ TP P + P I G
Sbjct: 719 -------ATAMLALQGDLDYKFRVYAVNAVGPGPPSDPTERHKTPPAAPEKNPQSIKIQG 771
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 357
+ + ISWEPL + N P + YK+ +R+ + E++ +K + VVR S F
Sbjct: 772 HRPHQMDISWEPLLPIEHNGPGLEYKVSYRRLGVEEEWKEHLVKRHS----FVVRNVSTF 827
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YEVK+Q+ N+ G GPE +VVT +S ED+P AP+ V FN+TA+ V+W P+ +
Sbjct: 828 --VPYEVKIQSKNNQGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTALRVSWTPV--L 883
Query: 418 RENIRGRLIGHRIKYWK--------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+RG L G++I + + + E ++ + R T+ A++ GL+P ++Y + V
Sbjct: 884 PATVRGHLGGYKIHWSRLRSLMNLNKTLDERQSLLFPGRRTQ--AIVPGLEPFSEYRLTV 941
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
YN G GP S+ + RT A Q P + N +V + W SP +IGY
Sbjct: 942 SVYNKKGNGPNSDPVIFRTPEGA-QVPILTAYKTQKN--SVLLEWG--SPLQTNGILIGY 996
Query: 530 KVRVWEVDQDMSRANDTI---IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ +++ D+ I V +T I L G Y + + G G
Sbjct: 997 LLQCHHINKTTMEVVDSREVNITVADTTQWQIQGLEEGSLYRFLLSGCTQAGCG 1050
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 125/604 (20%), Positives = 238/604 (39%), Gaps = 60/604 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V I C+ P P W+K+G + R++ ++ +++ +D+ +Y C A
Sbjct: 393 GSDVHIKCSVSGKPPPDITWRKNGELFTDDPQNNRRVLDD-TVVLHNAGPEDTAVYQCDA 451
Query: 63 TNVHGMDESKGRLIVLH-GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTH 119
+N HG + ++V++ P + + + ++ + CS V++ T
Sbjct: 452 SNSHGSLLANINIMVMNMAPRILTRDSQEYPVVQGADVVMNCSVFGSPPPTVSWSRGATQ 511
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G + G L+I D G+Y CV + GK + + V+ P
Sbjct: 512 ETIEGGRF---------FALQNGSLQIIGVEKEDGGKYVCVALNAEGKSAVSAMLEVKDP 562
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV-IGKEVD 238
+++ + + + T N + Y + ++ W E + + + +
Sbjct: 563 ------TRIISRPQDAEVVSGTTAQLNC--LAEYDKSLQDSFELVWRKDGEDIPLAVQEN 614
Query: 239 RYTGRKEASIENVLVPWSTYE-FKVIAGNELGYGEPSSPSPQYNTPADKPYQAP-SRIGG 296
G A ++ + V S + +A L ++ + P D P + S I
Sbjct: 615 SRHGVDGAVLQIINVDLSDNGLYTCVARTSLDEENATALLTVLDVP-DAPLKLEISEIRS 673
Query: 297 GGGKIGDLSISWEPLPREKQNAPNI---YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
++S+SW P + Y + W +FQ + GN A++ +
Sbjct: 674 PR----NISLSWVPGSDHNSSVTEFVVEYEESQWEPGRWRDFQ----RVPGNQATAMLAL 725
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +Y+ +V A+N VGPGP S+ + P+ PQ + +G ++++W
Sbjct: 726 QGDL---DYKFRVYAVNAVGPGPPSDPTERHKTPPAAPEKNPQSIKIQGHRPHQMDISWE 782
Query: 413 PIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
P+ I N G + +++ Y + E+ +E V S RN + V Y VK+
Sbjct: 783 PLLPIEHN--GPGLEYKVSYRRLGVEEEWKEHLVKRHSFVVRNVSTFV------PYEVKI 834
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ NN G GPE + + P P V ++ N T + V+W V P+ + GY
Sbjct: 835 QSKNNQGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTALRVSWTPVLPATVRGHLGGY 894
Query: 530 KVRVWEVDQDMSRANDTI------IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
K+ W + + N T+ + G A + L P Y + V ++ G+G S
Sbjct: 895 KIH-WSRLRSLMNLNKTLDERQSLLFPGRRTQAIVPGLEPFSEYRLTVSVYNKKGNGPNS 953
Query: 584 SPAI 587
P I
Sbjct: 954 DPVI 957
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 12/175 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
+G + + C P P PK W K G + S R F+N LL+S +D G Y C
Sbjct: 302 KGERLQLECIPGGYPIPKIKWMKMGEKLSS---RTQFDNFGKLLLLSDTEENDGGKYMCK 358
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G +IV P + + P ++ ++CS + D+ W NG
Sbjct: 359 AQNAAGEAVHYFDVIVEEPPKWLTEPPRDQLTVIGSDVHIKCSVSGKPPPDIT--WRKNG 416
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ N N + + + NA D Y+C ++ G + ++V
Sbjct: 417 ELFTDDPQN-----NRRVLDDTVVLHNAGPEDTAVYQCDASNSHGSLLANINIMV 466
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPE--AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSC 60
EG +T+ CNP A P+ F D +I R + +GNL + ++D+ Y C
Sbjct: 196 EGDPITLHCNPPKGAVPRQLFWMSLDLQLIQQDERVSMGTDGNLYFAHALKNDTRQDYCC 255
Query: 61 TAT--NVHGMDESKGRLIVLHGPSYYEQ------LPP-----KITIAAHRNLQLRCSAHT 107
A + M + G I + P LPP K+ + R LQL C
Sbjct: 256 NAKFPKLRTMVQKIGMAISVRIPEAPPMRMPSMLLPPGVQTEKVVLKGER-LQLECIPGG 314
Query: 108 EELLDVAYIWTHNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGEYECVVKSTV 165
+ + + M + E + D G LL +++ D G+Y C ++
Sbjct: 315 YPIPKIKW-----------MKMGEKLSSRTQFDNFGKLLLLSDTEENDGGKYMCKAQNAA 363
Query: 166 GKISTKTTVIVEGPP 180
G+ VIVE PP
Sbjct: 364 GEAVHYFDVIVEEPP 378
>gi|327272948|ref|XP_003221246.1| PREDICTED: neuronal cell adhesion molecule-like [Anolis carolinensis]
Length = 1270
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 165/601 (27%), Positives = 263/601 (43%), Gaps = 52/601 (8%)
Query: 12 CNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P+ W K G+I+ G + +NG L I ++ G Y+C A N G
Sbjct: 455 CAFFGSPVPEIEWFKGVKGSIL-QGNQYIFHKNGTLEIPVAKKNSGGTYTCVARNKLGKV 513
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
++ +L + P+ + P + + C + L W + N +
Sbjct: 514 QNDVQLQIKE-PTVIIKEPEYKVVQRTGQVSFECIIKHDTTLIPTVTWLKENNELPNDE- 571
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV--- 186
+ L I N + D G Y C+ +T+ +S + V PP P V
Sbjct: 572 ------RFMVGKNNLTIMNVTDKDGGAYTCIANTTLDSVSASAVLTVVAPPTAPPVVYDR 625
Query: 187 -------QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVD 238
++ + + S + W G N PIT + I +N V G +
Sbjct: 626 PDPPFDLELTDHLERSVQLTWIPGNDNNSPITKFIIEYEDAMREPGIWNYQTEVNG--IL 683
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
T K L P+ Y F+VIA N++G +PS S QY T A KP P+ + G G
Sbjct: 684 TTTQLK-------LSPYVNYSFRVIAINDIGRSQPSEASEQYFTKAAKPDDNPTDVQGIG 736
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 357
+ +L I WEPL + + N P + YK+ WR+K+ D E+ S + NV +V F
Sbjct: 737 SEPDNLVIMWEPLKQFQSNGPGLQYKVSWRQKDGDDEWTSVIV---ANVSRYIVSGTPTF 793
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
T YE+KVQ +ND+GP PE V S ED+P VAP + + NST V W+P+
Sbjct: 794 --TPYEIKVQGLNDLGPAPEPTTVIGHSGEDLPMVAPGNLQVQVVNSTLAKVQWDPVA-- 849
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA------LIVGLQPDTKYYVKVMA 471
++ IRG L G++I YWK + ++ + T ++ ++ GL+P + Y + V
Sbjct: 850 QKYIRGHLQGYKIYYWKVKSLSGRIKKHIEKKTLTFSGNKTHGMVPGLEPYSSYKLNVRV 909
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N GEGP S +T P P +K NP +T + PS ++GY +
Sbjct: 910 LNGKGEGPPSPDEAFKTPEGVPSAP---SFLKITNPNLDSLTLEWGPPSHPNGVLVGYTL 966
Query: 532 RVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
+ ++ D+ R + IP T A + +L+ RY + A ++ G G +++ A+T
Sbjct: 967 KFQPINSTHDLGRLEEISIPANETSLA-LSNLNYSTRYKFYLYAQTSVGSGNQITEEAVT 1025
Query: 589 F 589
Sbjct: 1026 I 1026
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G + + C E P P W K+G + RK FEN N L I+ +S DSG Y C A
Sbjct: 264 GNTLLLECIAEGLPTPTIRWIKEGGELPVN--RKFFENFNKTLKITDISEADSGKYKCMA 321
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N+ G + + P Y+ + P + + + L C A+ + ++ W NGV
Sbjct: 322 SNLLGSAHHVITVTIKAAP-YWIREPTNLVFSPGEDGSLICRANGKPKPSIS--WLANGV 378
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I E P+ +DG + T+ + Y+C + G + V V P
Sbjct: 379 PIAIAP----EDPSRKVDGDTIIFTDVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 432
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 133/334 (39%), Gaps = 45/334 (13%)
Query: 183 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
PG +QV V+ T A +QW G G I ++K+ + + + +H I K
Sbjct: 828 PGNLQVQVVNSTLAKVQWDPVAQKYIRGHLQGYKIYYWKVKSLSG------RIKKH-IEK 880
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ ++G K + L P+S+Y+ V N G G P SP + TP P APS +
Sbjct: 881 KTLTFSGNKTHGMVPGLEPYSSYKLNVRVLNGKGEG-PPSPDEAFKTPEGVP-SAPSFLK 938
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV----V 351
+ L++ W P N + Y + ++ N T L + I +
Sbjct: 939 ITNPNLDSLTLEWGP--PSHPNGVLVGYTLKFQPINSTH----DLGRLEEISIPANETSL 992
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPE--SEVVTIFSAEDMPQVAPQ-GVFSRGFNSTAIN 408
+ + Y T Y+ + A VG G + E VTI +++ P+ + T+ N
Sbjct: 993 ALSNLNYSTRYKFYLYAQTSVGSGNQITEEAVTIM--DEVLHAYPRIKNVTAAAAETSAN 1050
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+TW + E + + WK+++ +RN+ ++ GL P T Y V+
Sbjct: 1051 LTWEYEGPVHEIYIEYGVSSSKEEWKKEH---------VNGSRNFFMLKGLTPGTSYKVR 1101
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
V A EG + E + P K V I
Sbjct: 1102 VGA-----EGLSGFKSSETVFETGPAKASRQVDI 1130
>gi|410925447|ref|XP_003976192.1| PREDICTED: neurofascin-like [Takifugu rubripes]
Length = 1510
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 168/617 (27%), Positives = 269/617 (43%), Gaps = 52/617 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E + + C +P P W K+G G GG + NG L I +D G Y+C A
Sbjct: 603 ENTHTFLDCPFFGSPLPDLRWFKNGQGSGVDGGHYTVHNNGTLEIKRARAEDEGTYTCVA 662
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG- 121
N+ G E++ RL V +P + + +C ++ L V WT +
Sbjct: 663 NNLLGKAENQVRLEVKEATRII-GVPQHQSAVRGSTARFKCQVKSDPSLPVTVTWTKDDK 721
Query: 122 -VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ +G + D LL I+ + D G Y C VKS + S + V G P
Sbjct: 722 PLNVGW---------RLRKDEDLLSISAVNEGDEGMYTCTVKSEIDADSASARLTVLGCP 772
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEVD 238
P + + + S + W G + P+TH+ + W W N+S
Sbjct: 773 DPPVELDLSDPAARSVRLTWIPGNEHRSPVTHFLVQFEEDRWEPGQWRNMSS-------- 824
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
Y G + I L P+ Y+F+VIA N +G EPS+PSPQY T P P + G G
Sbjct: 825 -YPGHLNSVILQ-LAPFVNYQFRVIAINSVGQSEPSTPSPQYKTSGAAPDVIPRGLRGWG 882
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSE 356
++ I+WEPL ++N N+ Y ++WR+K+ +E ++ NV A + + S
Sbjct: 883 SMKDNMEITWEPLLDLERNGANLIYSLWWRRKDMSE-------DWNNVTTAGNKHMVHST 935
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y YE+K+QA N+ G GP S VV +S ED P AP + +ST + W P++L
Sbjct: 936 ETYVPYEIKIQAGNEFGSGPVSNVVVGYSGEDTPTTAPTDLRVSKVDSTKAYIHWKPVDL 995
Query: 417 IRENIRGRLIGHRIKYWK--------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
++++G +R+ YW+ E + E+ + S + +L+ L P +KY +
Sbjct: 996 --KSVQGEFKEYRLYYWRDASLVPGLEVSKEKQIKGFYSTVSEPSSLLSELLPFSKYKMF 1053
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
++ N EGP S +E T ++ P I N T+ + W P +IG
Sbjct: 1054 MVVANTRYEGPASN-TVEFTTKEGVPDIPRLFTINWKNLDTIQLKWG--KPLEPNGILIG 1110
Query: 529 YKVRVWEVD-QDMSRAN-DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
Y+++ V+ + RA +T +P N D + RY + A + G G + +
Sbjct: 1111 YQLKYQTVNGSRVGRAQFETFLP--NVTDFTLRLPDRFTRYKFFLSAVTQVGSGEVFAEE 1168
Query: 587 ITFQMGEEKEFKSGSPA 603
+ + E EF S A
Sbjct: 1169 MP-RSANEVEFTESSVA 1184
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 115/593 (19%), Positives = 208/593 (35%), Gaps = 129/593 (21%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGN--LLISPVSRDDSGIYSCT 61
G + + C P P W + G G RK+ FEN N L++ VS +D+G Y C
Sbjct: 420 GQELLLECIAAGLPTPSIKWYRKG---GDLPERKVKFENFNKTLVVMGVSEEDAGEYVCM 476
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N H L+ + Y+ P + +A + +L C A+ ++ W NG
Sbjct: 477 ANN-HLGSVRHSILVQVKAAPYWLDKPTNLVLAPDEHGRLVCRANGNPKPNIQ--WLING 533
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
I N P + G + + + Y+C + G + + +++ PP
Sbjct: 534 QPIETSPPN----PGRQVLGDTIIFRSVQMGSSAVYQCNASNQYGYLLANAFISVLDMPP 589
Query: 181 GLPG-GVQVVEVHKTSAT-------------IQW-TDGATNGRPITHYKI---------I 216
+ G Q+++V + + T ++W +G +G HY +
Sbjct: 590 RMLGPKNQLIKVIENTHTFLDCPFFGSPLPDLRWFKNGQGSGVDGGHYTVHNNGTLEIKR 649
Query: 217 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW-------STYEFKVIAGNELG 269
AR T+ V+ +++GK ++ + + + VP ST FK +
Sbjct: 650 ARAEDEGTYTCVANNLLGKAENQVRLEVKEATRIIGVPQHQSAVRGSTARFKCQVKS--- 706
Query: 270 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK 329
+PS P T DKP + WR
Sbjct: 707 --DPSLPVTVTWTKDDKPLN-----------------------------------VGWRL 729
Query: 330 KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM 389
+ D + S + G+ G+ + SE ++ + P P E+ D+
Sbjct: 730 RKDEDLLSISAVNEGDEGMYTCTVKSEIDADSASARLTVLG--CPDPPVEL-------DL 780
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY--YLS 447
A + ++ +TW P R + L+ W+ + Y +L+
Sbjct: 781 SDPA----------ARSVRLTWIPGNEHRSPVTHFLVQFEEDRWEPGQWRNMSSYPGHLN 830
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
++I+ L P Y +V+A N+ G+ P + +T AP P + G
Sbjct: 831 ------SVILQLAPFVNYQFRVIAINSVGQSEPSTPSPQYKTSGAAPDVIPRGLRGWGSM 884
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYK-------VRVWEVDQDMSRANDTIIPVGN 552
+ +TW EP++ + +W +DMS + + GN
Sbjct: 885 KDNMEITW---------EPLLDLERNGANLIYSLWWRRKDMSEDWNNVTTAGN 928
>gi|148707722|gb|EDL39669.1| neurofascin, isoform CRA_a [Mus musculus]
Length = 1195
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 479 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 536
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 537 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 595
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 596 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 646
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 647 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 700
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + R+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 701 -VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 758
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 759 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 811
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED P+ AP V R NSTAI++
Sbjct: 812 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISL 871
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 872 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYS 929
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 930 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 986
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 987 GILIGYILR 995
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 136/644 (21%), Positives = 232/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 378 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 435
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 436 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 486
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 487 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 541
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 542 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 591
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 592 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 644
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 645 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 694
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 695 DQFQPGVWHDHSRFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 751
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 752 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 803
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 804 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRV 863
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 864 LNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPR 919
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 920 GVVARLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 954
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 402
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 182 L 182
+
Sbjct: 459 M 459
>gi|1532035|emb|CAA63972.1| CHL1-like protein [Mus musculus]
Length = 1209
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 237/522 (45%), Gaps = 35/522 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D G R ENG L I + +D+G YSC
Sbjct: 438 GYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVD 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAMGKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++++ S KT V V G G
Sbjct: 557 EA---FEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSKKTQVTVLGV-G 612
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--EVDR 239
P + K + + + + I+ F + GK E+ R
Sbjct: 613 DPPETFTCQKDKNRSVRLLREAGDDHNSKSASTIVE--------FEGNREEPGKWEELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 665 VQG-EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I WEPL +QN P + YK+ W+ + E E + V +R+ + Y
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVY 778
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y+VKVQAIN +G P+ + VT++S ED P AP NST + VTW+ I +E
Sbjct: 779 APYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIP--KE 836
Query: 420 NIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G L G++I +WK +P+E + S RN ++ L P +++++ V+AY
Sbjct: 837 TVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDPFSEFHLTVLAY 895
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
N+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 896 NSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 936
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP----QGVFSRGFNSTAINVTWNPI 414
Y Y+ +V A+N+VG S + P AP Q + + + + W P+
Sbjct: 679 YVRYQFRVTAVNEVG---RSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 735
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + +N G + +++ + + PEE ++ T P Y VKV A N
Sbjct: 736 KSMEQN--GPGLEYKVSWKPQGAPEEWEEEIVTNHTLRVMTPTVYAP---YDVKVQAINQ 790
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P+ + + P P + +N T V VTW + + GY++ W
Sbjct: 791 LGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 850
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 851 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYI-F 909
Query: 590 QMGE 593
Q E
Sbjct: 910 QTPE 913
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 314 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 370
Query: 124 I 124
I
Sbjct: 371 I 371
>gi|348578149|ref|XP_003474846.1| PREDICTED: neurofascin isoform 1 [Cavia porcellus]
Length = 1190
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 247/552 (44%), Gaps = 66/552 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNR 631
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 632 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG-- 685
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 686 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 743
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 744 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 796
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI +
Sbjct: 797 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAIGL 856
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDN---------PEETAVYYLSRTTRNWALIVGLQ 460
WN + + ++G+L +R YW+E + + A + RT ++ L
Sbjct: 857 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFSSDRTR---GVVGRLF 911
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 912 PYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PE 968
Query: 521 FEEEPIIGYKVR 532
+ GY +R
Sbjct: 969 HPNGILTGYTLR 980
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 119/572 (20%), Positives = 207/572 (36%), Gaps = 96/572 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 527 RLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSW---LKDDEPLYIGNRMK 583
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 584 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLT---VLADQATPTNRLAA---LPK 637
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 638 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYIVQFE-- 678
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 679 -EDQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 734
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 735 SGAP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRE 786
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE + + + P+ P+ V +
Sbjct: 787 TWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKV 846
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+ +N T + + W V + + Y+ W
Sbjct: 847 RVLNSTAIGLQWNRVYSDTVQGQLREYRAYYW 878
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|253314410|ref|NP_001156578.1| neural cell adhesion molecule L1-like protein precursor [Danio rerio]
gi|189313742|gb|ACD88870.1| camel [Danio rerio]
Length = 1154
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 269/593 (45%), Gaps = 46/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKD---GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G +V + CN ++P W+++ G++ G R + +NG+L I V +D G Y C
Sbjct: 442 GKSVIMDCNVFSSPPATLNWRREDPEGSV--DGERYSLLKNGSLQIHKVEMEDMGQYKCL 499
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTH 119
A N G L + E P + + +L C + L ++ ++W
Sbjct: 500 ANNSEGSASITTELFIKDSTRIVEA-PQDMKVIRGSVAELECQVECDPSLRRELEFVWLK 558
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G+ I + T D G+L+I N S +D G Y C+V++++ + + + V
Sbjct: 559 DGINILSNSSERYFT-----DEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLDV 613
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKEV 237
P P + + ++ S + W + + + PIT + I ++W W K++
Sbjct: 614 PDPPVELLLSDLKDRSVKLHWVNTSDHNSPITEFIIQYEESHWEPEKW---------KDL 664
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R + RK S L Y+F+VIA NE+G PS PS +Y TP P + P I
Sbjct: 665 LRVSSRK-FSAPLALYCHINYQFRVIAVNEIGRSHPSMPSGRYKTPPCAPDRNPENIKIE 723
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + ISWEPL + N P + YK+ +R + ++ + +K + V V P+
Sbjct: 724 GHLPHQMDISWEPLLPVEHNGPGLEYKLSYRLLGVEDSWKEQMVKRHSFV---VRDTPT- 779
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+ YEVK+QA N G P +VVT +S ED+P VAP V + NST + V+W+P+
Sbjct: 780 --FVPYEVKIQAFNRHGWAPGPKVVTGYSGEDLPLVAPDNVSAEVLNSTLLKVSWSPVP- 836
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVM 470
+ +RG L G+ + YW+ + + R + R+ ++ GL+P ++Y + V
Sbjct: 837 -QTTLRGHLGGYTVNYWQTQSLLTSKKIPSERQSLTIPGNRSHTMVPGLKPFSEYSLTVN 895
Query: 471 AYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+N G GP++ L + ++ P++P ++K N +T + P + GY
Sbjct: 896 VFNRRGNGPQAAVPSLSQLHKGVPEQPH---NLKATNFQKDAITLVWAPPHETNGHLTGY 952
Query: 530 KVRVWEV--DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ V ++ + N I +T + DL Y + A + G G
Sbjct: 953 LLQYQTVVDNETLGELNSVNISGADTTQWVLRDLQEDNSYKFYLSACTQVGCG 1005
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 110/538 (20%), Positives = 197/538 (36%), Gaps = 48/538 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISP-VSRDDSGIY 58
+ +G + + C E P P+ W K I G +R +N G LL P + +D G Y
Sbjct: 255 FLKKGEELELECIAEGLPTPEVEWIK---IWGDLPKRTQIKNFGKLLTIPNIREEDEGKY 311
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIW 117
C A N HG D ++ V PS+ ++ P K +A ++ + CSA + + W
Sbjct: 312 MCKAKNQHGEDVHHFQVEVEEPPSWQKE-PLKSQLAWIGSDIHINCSATGKPQPTIT--W 368
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
NG L++ + + + + I A D Y+C + G + V+V
Sbjct: 369 KRNG-----KPLDDFPSTHHKMLDDRIIILKAEQKDTAVYQCEASNKHGSLLANANVLVM 423
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P L +E D P A NW + V G
Sbjct: 424 NHPPLILTRNYLEYATMLGKSVIMDCNVFSSP------PATLNWRRE--DPEGSVDG--- 472
Query: 238 DRYTGRKEASIENVLVPWSTY-EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+RY+ K S++ V ++K +A N G S + + + + +AP +
Sbjct: 473 ERYSLLKNGSLQIHKVEMEDMGQYKCLANN--SEGSASITTELFIKDSTRIVEAPQDMKV 530
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
G + +L E P ++ + W K + + + + + GI + S
Sbjct: 531 IRGSVAELECQVECDPSLRRE-----LEFVWLKDGINILSNSSERYFTDEGILQIFNVSH 585
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y V+ D S +T+ D P + ++ + W
Sbjct: 586 SDQGNYTCIVRTSLDQDTA--SAYITVLDVPD----PPVELLLSDLKDRSVKLHWVNTSD 639
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
I +I + +W+ + ++ L ++R ++ + L Y +V+A N G
Sbjct: 640 HNSPITEFIIQYEESHWEPEKWKD----LLRVSSRKFSAPLALYCHINYQFRVIAVNEIG 695
Query: 477 EGPESE---RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S RY +T AP + P + I+G P + ++W + P P + YK+
Sbjct: 696 RSHPSMPSGRY--KTPPCAPDRNPENIKIEGHLPHQMDISWEPLLPVEHNGPGLEYKL 751
>gi|344277014|ref|XP_003410300.1| PREDICTED: neurofascin-like isoform 1 [Loxodonta africana]
Length = 1189
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 247/551 (44%), Gaps = 64/551 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ L V P+ Q+P + +QL C + L + W + + +GN
Sbjct: 521 AENQVHLEV-KDPTRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LALLPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + NV +
Sbjct: 743 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKED--------NPEETAVYYLSRTTRNWALIVGLQP 461
WN + + ++G+L +R YW+E + + +L TR ++ L P
Sbjct: 856 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTR--GVVARLFP 911
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 912 YSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLQTINLEWDH--PEH 968
Query: 522 EEEPIIGYKVR 532
+IGY ++
Sbjct: 969 PNGILIGYTLK 979
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 136/642 (21%), Positives = 232/642 (36%), Gaps = 110/642 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLMRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDKGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P + Q+ E V K T+Q K +W E
Sbjct: 526 HLEVKDPTRI---YQMPEDQVVKRGTTVQLP---------CRVKHDPSLKLTVSWLKDDE 573
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSS 275
+ Y G + ++ L + E + IA EL + ++
Sbjct: 574 PL-------YVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQAT 626
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKK 330
P+ N A P P R ++ DL+ ++W +P + N+P Y + +
Sbjct: 627 PT---NRLALLPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE-- 677
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 678 -EDQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 733
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 734 SGA--APESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRD 785
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I
Sbjct: 786 TWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKI 845
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDAD 557
+ +N T + + W V + + Y+ W + S+ +G+
Sbjct: 846 RVLNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFLGDRTRGV 905
Query: 558 IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 906 VARLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|213982987|ref|NP_001135654.1| neuronal cell adhesion molecule precursor [Xenopus (Silurana)
tropicalis]
gi|197246560|gb|AAI68554.1| Unknown (protein for MGC:184780) [Xenopus (Silurana) tropicalis]
Length = 1294
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 176/638 (27%), Positives = 280/638 (43%), Gaps = 70/638 (10%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGM 68
+ C +PKP+ W K + G +F +NG L I +D SG Y+C ATN G
Sbjct: 449 LHCPFFGSPKPEIKWFKGAHGSVLHGNGYVFHDNGTLEIPVAQKDSSGNYTCVATNSFG- 507
Query: 69 DESKGRLIVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
S +I L P+ + P I + + C + L IW + + N
Sbjct: 508 --SVKDMIGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVIWLKDDTELPN 565
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS----------TKTTVIV 176
+ + G L I N + D G Y CV + + +S T T I
Sbjct: 566 DE-------RFKVTKGHLTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEATPTPAIF 618
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIG 234
P P +++ + + S + W G N PIT++ I + TW H +
Sbjct: 619 YDRPDHPFDLELTDHLERSVQLSWVPGDDNNSPITNFIIEYEDTMHDPGTW-----HFLT 673
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
K +G + + N L P+ Y F+VIA NE G EPS S QY T +P + PS +
Sbjct: 674 K----VSGTQTTARLN-LSPFVNYSFRVIAVNEFGRSEPSESSEQYMTKPAEPDKNPSGV 728
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 353
G G + +L I+WE + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 729 KGVGTEPDNLVIAWESIKGFDSNGPGLQYKVSWRQKDFDDEWTSIIV---ANVSKYIVSG 785
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
F YE+KVQA+ND+G P+ VV +S ED+P AP V N+T V W+
Sbjct: 786 TPTF--EPYEIKVQALNDIGYAPDPSVVIGYSGEDLPMTAPSNVELEVINNTLAKVQWDS 843
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
+ +IRG L G+R+ YWK +N + ++ + + ++ GL+P T Y +
Sbjct: 844 VP--STSIRGHLQGYRVYYWKAENHTKRNKRHMEKRMLTFHGNKTHGMLPGLEPYTSYIL 901
Query: 468 KVMAYNNAGEGPES-ERYLERTYRKAPQKPPSA-VHIKGINPTTVHVTWRYVSPSFEEEP 525
V +N GEGP S ++Y E P+ PSA + + + T +T + P+
Sbjct: 902 NVRVFNGKGEGPPSTDKYFE-----TPEGVPSAPLKLDVVERTIESLTLMWKPPAHPNGV 956
Query: 526 IIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RM 582
+ Y + ++ ++S + +P T + +L+ RY + A + G G ++
Sbjct: 957 LTHYTLIFQSINATHELSPPVEITVPTNET-SLVLRNLNQSTRYKFYLYAHTVVGPGIQI 1015
Query: 583 SSPAITF---------QMGEEKE-FKSGSPALYSASTT 610
+ AIT +G KE + SPA+++ S T
Sbjct: 1016 TQEAITVLDQAGIPPPAVGTGKEPLSATSPAMHTVSPT 1053
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMD 69
C E P P+ W+K+ + + R +EN N L I V+ D+G Y C N+ G
Sbjct: 268 CIAEGLPTPEIHWRKESADLPAN--RVFYENFNKTLKIIDVTEADAGKYKCIGRNILGTT 325
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
+ V P Y+ P I ++ + L C A + W NGV I
Sbjct: 326 HHIITVTVKAAP-YWITPPRNIVLSPGEDGSLTCRASGSPTPSIT--WLINGVSI----- 377
Query: 130 NELETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGGV 186
EL + + +DG + + Y+C + G + V ++ PP +
Sbjct: 378 -ELAPTDASRRVDGDTIMFSKVQDGATAVYQCNASNKYGYLLANAFVNVIAEPPRIMMSK 436
Query: 187 QVVEV 191
V +V
Sbjct: 437 HVYKV 441
>gi|149058629|gb|EDM09786.1| neurofascin, isoform CRA_b [Rattus norvegicus]
Length = 1200
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 479 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 536
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 537 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 595
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 596 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 646
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 647 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 700
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 701 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 758
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 759 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 811
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 812 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISL 871
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 872 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYS 929
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 930 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 986
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 987 GILIGYTLR 995
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 120/570 (21%), Positives = 208/570 (36%), Gaps = 92/570 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 378 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 435
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 436 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 486
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 487 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 541
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 542 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 591
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 592 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 644
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 645 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 694
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 695 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 751
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 752 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 803
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 804 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 863
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+N T + + W V + + Y+ W
Sbjct: 864 LNSTAISLQWNRVYSDTVQGQLREYRAYYW 893
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 402
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 182 L 182
+
Sbjct: 459 M 459
>gi|237858630|ref|NP_001153788.1| neurofascin isoform 2 precursor [Mus musculus]
Length = 1189
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + R+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 856 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 971 GILIGYILR 979
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 136/644 (21%), Positives = 232/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 679 DQFQPGVWHDHSRFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 788 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 848 LNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPR 903
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 904 GVVARLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|149058633|gb|EDM09790.1| neurofascin, isoform CRA_f [Rattus norvegicus]
Length = 1336
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 563 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 613
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 614 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 667
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 668 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 725
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 726 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 778
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 779 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISL 838
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 839 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYS 896
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 897 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 953
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 954 GILIGYTLR 962
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 136/644 (21%), Positives = 233/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 509 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 558
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 559 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 611
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 612 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 661
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 662 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 718
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 719 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 770
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 771 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 830
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 831 LNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPR 886
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 887 GVVGRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 921
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|327271271|ref|XP_003220411.1| PREDICTED: neurofascin-like [Anolis carolinensis]
Length = 1164
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 251/542 (46%), Gaps = 59/542 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG K ENG L I ++D G Y+C ATN+ G
Sbjct: 447 CPFFGSPIPTLRWFKNGQ--GSTLHGGNYKAHENGTLEIIRARKEDQGTYTCVATNLLGK 504
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN------GV 122
+++ RL + P+ P + L C + L + W + G
Sbjct: 505 AQNQVRLEI-KDPTRIIDGPKDAVPKKGSTVYLVCRTIHDPTLRLTVSWLKDDVPLYLGT 563
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
RI D DG L I S D G Y CV + + K + + + + P
Sbjct: 564 RIKKED-----------DG--LTIYGVSEKDQGYYTCVASTELDKDTARAHLTILARPDR 610
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRY 240
P +++ ++ + S + W G N PIT Y + + W N S RY
Sbjct: 611 PRDLELTDLSERSVRLTWIPGDDNNSPITDYIVEFEEDRYEPGRWQNHS---------RY 661
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G +++ L P+ Y+F+VIA NE+G PS PS +Y+T +P P+ + G G
Sbjct: 662 PGSVNSAVLR-LAPYVNYQFRVIAVNEVGSSYPSLPSERYHTNGARPEYNPTGVQGAGTA 720
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVG-IAVVRIPSEFY 358
++ ISW PL + PN+ Y + WR+++ E + + T+K G+V V + P
Sbjct: 721 KNNMVISWTPLSATQVYGPNLRYIVKWRRRDTRESWSNRTVK--GDVSQYTVTQTP---I 775
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
YT YE+KVQA+ND G PE++ V +S ED P+ AP V + NSTA+++ W+ ++
Sbjct: 776 YTPYEIKVQAVNDYGMAPEADTVIGYSGEDYPKAAPTDVRLKVVNSTAVSLQWS--KVYP 833
Query: 419 ENIRGRLIGHRIKYWKED--------NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
E ++G+L +R YW+E + ++ ++ + TR ++ L P + Y ++++
Sbjct: 834 ETVQGQLKEYRAYYWRESSLLKNLWVSKKKQSMSFSGDRTR--GIVSRLFPYSNYKLEMV 891
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N G+GP S+ LE T + P I+ N T+ + W + P +IGY
Sbjct: 892 VANGRGDGPRSDT-LEFTTPEGVPSTPRYFRIRQPNLETITLEWEH--PEHPNGNLIGYT 948
Query: 531 VR 532
+R
Sbjct: 949 LR 950
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 133/617 (21%), Positives = 236/617 (38%), Gaps = 96/617 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G I S E ++ + S +Y C
Sbjct: 346 GEDGR--LVCQANGNPKPSIQWLVNGEPIESSAPNPSREVTGDTIMFRDIQSGSSAVYQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
A+N HG + + VL + +P I A RN ++ + LL+ +
Sbjct: 404 NASNEHGYLLANAFVSVL------DVIP---RILAPRNQLIKVILNNRTLLNCPFFGSPI 454
Query: 117 ----WTHNG----VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + GN +E G LEI A D G Y CV + +GK
Sbjct: 455 PTLRWFKNGQGSTLHGGNYKAHE---------NGTLEIIRARKEDQGTYTCVATNLLGKA 505
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ + ++ P + G + V K +T+ ++ RT + T +
Sbjct: 506 QNQVRLEIKDPTRIIDGPKDA-VPKKGSTVY---------------LVCRTIHDPT-LRL 548
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTP 283
+ + +V Y G + ++ L + E + +A EL + P
Sbjct: 549 TVSWLKDDVPLYLGTRIKKEDDGLTIYGVSEKDQGYYTCVASTELDKDTARAHLTILARP 608
Query: 284 ADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
D+P ++ DLS ++W +P + N+P Y + + + + +
Sbjct: 609 -DRPRDL---------ELTDLSERSVRLTW--IPGDDNNSPITDYIVEFEEDRYEPGRWQ 656
Query: 339 TLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAP 394
Y G+V AV+R+ Y Y+ +V A+N+VG P SE A P+ P
Sbjct: 657 NHSRYPGSVNSAVLRLAP---YVNYQFRVIAVNEVGSSYPSLPSERYHTNGAR--PEYNP 711
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--- 451
GV G + ++W P+ + + G + + +K+ + D E + +RT +
Sbjct: 712 TGVQGAGTAKNNMVISWTPLSATQ--VYGPNLRYIVKWRRRDTRES----WSNRTVKGDV 765
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+ + T Y +KV A N+ G PE++ + + P+ P+ V +K +N T V
Sbjct: 766 SQYTVTQTPIYTPYEIKVQAVNDYGMAPEADTVIGYSGEDYPKAAPTDVRLKVVNSTAVS 825
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDADIVDLSPGKR 566
+ W V P + + Y+ W + S+ ++ G+ + L P
Sbjct: 826 LQWSKVYPETVQGQLKEYRAYYWRESSLLKNLWVSKKKQSMSFSGDRTRGIVSRLFPYSN 885
Query: 567 YHMRVLAFSNGGDGRMS 583
Y + ++ + GDG S
Sbjct: 886 YKLEMVVANGRGDGPRS 902
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P +W K G + +G R EN + L I+ VS +DSG Y C A
Sbjct: 256 GEDLLLECIASGVPTPGIMWHKKGGDLPAG--RTKLENFDKALHIANVSEEDSGEYFCLA 313
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G +IV P + ++ P + +A + +L C A+ + W NG
Sbjct: 314 SNKVGTSRHVISVIVKAAPFWLDE-PQNLILAPGEDGRLVCQANGNPKPSIQ--WLVNGE 370
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I + N P+ + G + + + Y+C + G + V V
Sbjct: 371 PIESSAPN----PSREVTGDTIMFRDIQSGSSAVYQCNASNEHGYLLANAFVSV 420
>gi|291402557|ref|XP_002717617.1| PREDICTED: neurofascin isoform 2 [Oryctolagus cuniculus]
Length = 1157
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 239/534 (44%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG + ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + I N
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDEEPLYISN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 563 RMKKEDDS---------LTIFGVAEKDQGSYTCVASTELDQDLAKAYLTVMGRPDRPRDL 613
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 614 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGNVNS 666
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 667 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 725
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + N + R + Y YE+
Sbjct: 726 TWTPMNATSAFGPNLRYIVKWRRR-------ETRDAWNNATVWGSRYVVGQTPVYVPYEI 778
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G PE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 779 RVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTAISLQWN--RVYSDTVQGQ 836
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 837 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPYSNYKLEMVVVNGRGDG 896
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P ++GY ++
Sbjct: 897 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILVGYTLK 947
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 131/630 (20%), Positives = 226/630 (35%), Gaps = 101/630 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTK 171
W NG + L+ N ++ + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG------QGSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQ 507
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ V+ P + + +V K T+Q K +W E
Sbjct: 508 VRLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDEEP 557
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADK 286
+ Y + ++ L + E + +A EL + Y T +
Sbjct: 558 L-------YISNRMKKEDDSLTIFGVAEKDQGSYTCVASTELD----QDLAKAYLTVMGR 606
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY--- 343
P P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 607 P-DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---EDQFQPGVWHDHSKF 660
Query: 344 -GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFS 399
GNV AV+++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 661 PGNVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKG 715
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 716 EGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRDAWNNATVWGSRYVVGQ 769
Query: 460 QPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P Y ++V A N+ G+ PE E + + P+ P+ V ++ +N T + + W V
Sbjct: 770 TPVYVPYEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTAISLQWNRVY 829
Query: 519 PSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 830 SDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVSQLFPYSNYKL 885
Query: 570 RVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 886 EMVVVNGRGDGPRS---------ETKEFTT 906
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ--WMVNGE 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|354478079|ref|XP_003501243.1| PREDICTED: neurofascin isoform 1 [Cricetulus griseus]
Length = 1189
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 248/549 (45%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y I + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 856 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 971 GILIGYTLK 979
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 138/644 (21%), Positives = 236/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 526 RLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWL---KDDEPLYIGNRMK 582
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ + + T F V+E G YT ++ L + V+A + ++P+
Sbjct: 583 KEDDSLTIFGVAERDQGS----YTCMASTELDQDL---AKAYLTVLA-------DQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y I + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVIQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 679 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 788 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 848 MNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPR 903
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 904 GVVARLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|149058631|gb|EDM09788.1| neurofascin, isoform CRA_d [Rattus norvegicus]
Length = 1189
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 856 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 971 GILIGYTLR 979
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 120/570 (21%), Positives = 208/570 (36%), Gaps = 92/570 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 679 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 788 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+N T + + W V + + Y+ W
Sbjct: 848 LNSTAISLQWNRVYSDTVQGQLREYRAYYW 877
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|348521534|ref|XP_003448281.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
niloticus]
Length = 1283
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 160/604 (26%), Positives = 273/604 (45%), Gaps = 64/604 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
EG + C +PKPK +W++ D + + + R NG L I+ V+ D GIY+CT
Sbjct: 459 EGQKALLECETFGSPKPKVIWERNNDSSFLLADRRVNPLSNGWLEIANVTHSDDGIYTCT 518
Query: 62 ATN----VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI- 116
N + E R ++L P + + A C + + LD +I
Sbjct: 519 VPNSNLSISAELEIFNRTVILSPPQ-------ALKVQAGERAIFTCLSLADPRLDPPFIQ 571
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
W N ++ + + ++ T +DG L+I + D G Y C + + + + T+ +
Sbjct: 572 WRKNNQKLADSNNDKKYT----MDGPDLKIADVQPDDEGVYTCEIITKLDVAEARGTLTL 627
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVI 233
P P +Q+ + + T+ WT G + P+T Y + R+N S W
Sbjct: 628 WDRPDPPILLQISDPKDRTVTLSWTPGDDHNGPVTEYVVEFEDQRSN-ESVW-------- 678
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
K + R KE ++ + L P+ +Y F+VIA N++G +PS PS +NTPA+ P P
Sbjct: 679 -KMLARVRENKERAVLS-LWPFMSYRFRVIAINDVGKSDPSKPSGIHNTPAEAPDNNPED 736
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--NDTEFQSETLKEYGNVGIAVV 351
+ + L I+W+ + + + + P Y + WR+ ++ + NV
Sbjct: 737 VKSESIEPNTLVITWKKMDKTEVHGPGFKYCVQWRQAVGGGPDWHEK------NVTEPPF 790
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
R+ + ++ YE+KVQA+N++G GPE + V +S ED+P AP V NST I VTW
Sbjct: 791 RVDNVGNFSAYEIKVQALNEIGRGPEPDPVIGYSGEDVPLEAPMDVGVEIINSTTIKVTW 850
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPE----------ETAVYYLSRTTRNWALIVGLQP 461
PI+ +E +RG L+G++I Y ++ + E+ V + +I L+P
Sbjct: 851 APID--KETVRGHLLGYKIHYTRKVHRSHHRGRRAQELESTVVVKTEPNEKKKVISDLRP 908
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y +KV YN GEGP SE T P PP + + +P+ +T + P
Sbjct: 909 FSNYTLKVTVYNIKGEGPFSEALPFETPEGVP-GPPLTLTLD--SPSETEMTLHWTPPGQ 965
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV-----DLSPGKRYHMRVLAFSN 576
+IGY ++ Q ++ ++D+ + V D + +L Y + +
Sbjct: 966 PNGVLIGYLLQY----QQITESDDSPMQVETIDDPTVTHITLKNLDHKSDYRFYLRGRTA 1021
Query: 577 GGDG 580
GDG
Sbjct: 1022 AGDG 1025
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
+A G + + C E P P+ W ++DG + + + +F+ L + +S D G Y
Sbjct: 271 HALRGQTLELECIVEGLPTPEVSWMRRDGELSETRTTKDMFDR-RLRFTNISESDGGEYQ 329
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V P Y+ + P A ++L C A + + WT
Sbjct: 330 CIAENSQGNTKHIYMLTVEAAP-YWIKEPVSQLYAPGETVRLDCQA--DGIPSPIISWTI 386
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV I +D + T + G L+ + + +F D Y+C + G I T T V ++E
Sbjct: 387 NGVPISGVDKDPRRT--LTASGSLI-LEDVNFGDTAIYQCRASNKHGTILTNTNVYVIEL 443
Query: 179 PPGL 182
PP +
Sbjct: 444 PPQI 447
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 78/195 (40%), Gaps = 31/195 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G V + C + P P W +G + + RR + +G+L++ V+ D+ IY C
Sbjct: 365 GETVRLDCQADGIPSPIISWTINGVPISGVDKDPRRTLTASGSLILEDVNFGDTAIYQCR 424
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAY 115
A+N HG I+ + Y +LPP+I T A + T
Sbjct: 425 ASNKHGT-------ILTNTNVYVIELPPQILTDDGNTYAYTEGQKALLECETFGSPKPKV 477
Query: 116 IWTHN---GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
IW N + + +N L G LEI N + +D G Y C V ++ IS +
Sbjct: 478 IWERNNDSSFLLADRRVNPLS-------NGWLEIANVTHSDDGIYTCTVPNSNLSISAEL 530
Query: 173 -----TVIVEGPPGL 182
TVI+ P L
Sbjct: 531 EIFNRTVILSPPQAL 545
>gi|149058628|gb|EDM09785.1| neurofascin, isoform CRA_a [Rattus norvegicus]
Length = 1205
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 479 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 536
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 537 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 595
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 596 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 646
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 647 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 700
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 701 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 758
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 759 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 811
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 812 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISL 871
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 872 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYS 929
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 930 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 986
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 987 GILIGYTLR 995
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 120/570 (21%), Positives = 208/570 (36%), Gaps = 92/570 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 378 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 435
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 436 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 486
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 487 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 541
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 542 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 591
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 592 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 644
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 645 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 694
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 695 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 751
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 752 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 803
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 804 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 863
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+N T + + W V + + Y+ W
Sbjct: 864 LNSTAISLQWNRVYSDTVQGQLREYRAYYW 893
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 288 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 345
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 346 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 402
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 403 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 458
Query: 182 L 182
+
Sbjct: 459 M 459
>gi|38372283|sp|O42414.1|NFASC_CHICK RecName: Full=Neurofascin; Flags: Precursor
gi|2467122|emb|CAA74726.1| neurofascin [Gallus gallus]
Length = 1369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 171/610 (28%), Positives = 273/610 (44%), Gaps = 66/610 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 587
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 588 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 638
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 639 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 694
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 748
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 749 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 805
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED P+ AP V R NSTAI +TW
Sbjct: 806 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWT 862
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYY 466
+ L + I+G+L +R +W++ + + R RN ++ L P + Y
Sbjct: 863 RVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYK 920
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++++ N G+GP SE T P P + I+ N ++++ W + P +
Sbjct: 921 LEMVVTNGRGDGPRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVL 977
Query: 527 IGYKVR----VWEVDQDMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY +R + S+ T++ N + P RY + A + GDG
Sbjct: 978 TGYNLRYQASCLSSPVNGSKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1037
Query: 581 RM---SSPAI 587
+ SPA+
Sbjct: 1038 EVIVEESPAL 1047
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>gi|354471626|ref|XP_003498042.1| PREDICTED: neuronal cell adhesion molecule [Cricetulus griseus]
Length = 1258
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 472 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 529
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 530 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDE 588
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+ID L +T+ D G Y C +T+ ++S + V P
Sbjct: 589 -------RFSIDKDHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRVVAPTPTPAPIYD 641
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I W + +E
Sbjct: 642 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAE------ 695
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 696 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 751
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 752 LGTEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 808
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST V W+P+
Sbjct: 809 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVP 866
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L +++RG L G+RI YWK + ++ + ++ ++ GLQP + Y + V
Sbjct: 867 L--KSVRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYELNV 924
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 925 RVVNGKGEGPASTDKGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 981
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 982 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1040
Query: 587 IT 588
IT
Sbjct: 1041 IT 1042
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 133/614 (21%), Positives = 230/614 (37%), Gaps = 81/614 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 371 GENGTLICRANGNPKPRIGWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQCN 429
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 430 ASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 480
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 481 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 536
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P ++++ A +Q + + H + +I W N
Sbjct: 537 EIKDP------TRIIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDER 589
Query: 226 FNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTP 283
F++ +H++ +V G N + +V A L P+ +P+P Y+ P
Sbjct: 590 FSIDKDHLVVTDVGDDDGGVYTCAANTTLD------RVSASAVLRVVAPTPTPAPIYDVP 643
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSET 339
P + + ++W P + N+P I Y+ R+ Q+E
Sbjct: 644 -----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMREAGIWHHQAEV 696
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG 396
G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 697 ---SGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPTA 748
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 749 VEGLGTEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIV 804
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
G Y +KV A N+ G PE + + P P VH+ +N T V W
Sbjct: 805 SGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDP 864
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMR 570
V + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 865 VPLKSVRGHLQGYRIYYWKA-QGSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYELN 923
Query: 571 VLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 924 VRVVNGKGEGPAST 937
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I+ VS DSG Y C A
Sbjct: 281 GSVLSLECIAEGLPTPIIYWIKEDGTLPVNRTFYRNFKK-TLQITQVSEADSGNYQCIAK 339
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ + W NGV
Sbjct: 340 NTLGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIG--WLTNGVP 396
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 397 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 449
>gi|149051181|gb|EDM03354.1| rCG62174, isoform CRA_c [Rattus norvegicus]
Length = 880
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 257/592 (43%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 59 CAFFGSPMPTIEWFK--GTKGSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 116
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 117 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 175
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
++D L +++ D G Y C +T+ +S + V P P +++
Sbjct: 176 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVDVPNPPFDLEL 228
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I + W + +E +
Sbjct: 229 TNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQT 278
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I
Sbjct: 279 TAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVI 338
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 339 TWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 393
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE V S ED+P VAP V NST W+P+ +++RG L
Sbjct: 394 VQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP--PKSVRGHL 451
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GLQP + Y + V N GEGP
Sbjct: 452 QGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGP 511
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 512 ASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYILKYQPINST 568
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ AIT
Sbjct: 569 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEAIT 619
>gi|149051180|gb|EDM03353.1| rCG62174, isoform CRA_b [Rattus norvegicus]
Length = 1250
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 257/592 (43%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 429 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 486
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 487 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 545
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
++D L +++ D G Y C +T+ +S + V P P +++
Sbjct: 546 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVDVPNPPFDLEL 598
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I + W + +E +
Sbjct: 599 TNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE----------VSGTQT 648
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I
Sbjct: 649 TAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVI 708
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 709 TWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 763
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE V S ED+P VAP V NST W+P+ +++RG L
Sbjct: 764 VQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP--PKSVRGHL 821
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + ++ ++ GLQP + Y + V N GEGP
Sbjct: 822 QGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNVRVVNGKGEGP 881
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 882 ASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYILKYQPINST 938
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ AIT
Sbjct: 939 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEAIT 989
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 328 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 386
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 387 ASNKYGYLLANAFVNVL-------AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 437
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 438 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 493
Query: 175 IVEGP 179
++ P
Sbjct: 494 EIKDP 498
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 238 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 296
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 297 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 353
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 354 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 406
>gi|291402555|ref|XP_002717616.1| PREDICTED: neurofascin isoform 1 [Oryctolagus cuniculus]
Length = 1174
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 239/534 (44%), Gaps = 45/534 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG + ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + I N
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDEEPLYISN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
E ++ L I + D G Y CV + + + K + V G P P +
Sbjct: 580 RMKKEDDS---------LTIFGVAEKDQGSYTCVASTELDQDLAKAYLTVMGRPDRPRDL 630
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
++ ++ + S + W G N PIT Y + + F + + ++ G +
Sbjct: 631 ELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG---VWHDHSKFPGNVNS 683
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L P+ Y+F+VIA NE+G PS PS +Y T P P + G G + ++ I
Sbjct: 684 AVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPGDVKGEGTRKNNMEI 742
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEV 364
+W P+ PN+ Y + WR++ ET + N + R + Y YE+
Sbjct: 743 TWTPMNATSAFGPNLRYIVKWRRR-------ETRDAWNNATVWGSRYVVGQTPVYVPYEI 795
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+VQA ND G PE E V +S ED P+ AP V R NSTAI++ WN + + ++G+
Sbjct: 796 RVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTAISLQWN--RVYSDTVQGQ 853
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEG 478
L +R YW+E + + R R ++ L P + Y ++++ N G+G
Sbjct: 854 LREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSQLFPYSNYKLEMVVVNGRGDG 913
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
P SE T P P ++ N T+++ W + P ++GY ++
Sbjct: 914 PRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNGILVGYTLK 964
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 131/630 (20%), Positives = 226/630 (35%), Gaps = 101/630 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTK 171
W NG + L+ N ++ + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG------QGSNLDGGNYHVHENGSLEIKMIRKEDQGIYTCVATNILGKAENQ 524
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ V+ P + + +V K T+Q K +W E
Sbjct: 525 VRLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDEEP 574
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADK 286
+ Y + ++ L + E + +A EL + Y T +
Sbjct: 575 L-------YISNRMKKEDDSLTIFGVAEKDQGSYTCVASTELD----QDLAKAYLTVMGR 623
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY--- 343
P P + + ++W +P + N+P Y + + + +FQ ++
Sbjct: 624 P-DRPRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---EDQFQPGVWHDHSKF 677
Query: 344 -GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFS 399
GNV AV+++ Y Y+ +V AIN+VG P SE A P+ P V
Sbjct: 678 PGNVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESNPGDVKG 732
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +TW P+ G ++Y + ET + + T +VG
Sbjct: 733 EGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRDAWNNATVWGSRYVVGQ 786
Query: 460 QPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P Y ++V A N+ G+ PE E + + P+ P+ V ++ +N T + + W V
Sbjct: 787 TPVYVPYEIRVQAENDFGKAPEPETVIGYSGEDYPRAAPTDVKVRVMNSTAISLQWNRVY 846
Query: 519 PSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+ + Y+ W V Q +A+ P G+ + L P Y +
Sbjct: 847 SDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPRGVVSQLFPYSNYKL 902
Query: 570 RVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
++ + GDG S E KEF +
Sbjct: 903 EMVVVNGRGDGPRS---------ETKEFTT 923
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLVLAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|237858625|ref|NP_001153785.1| neurofascin isoform 2 precursor [Rattus norvegicus]
Length = 1189
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 856 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY +R
Sbjct: 971 GILIGYTLR 979
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 121/570 (21%), Positives = 209/570 (36%), Gaps = 92/570 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 679 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 788 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+N T + + W V P + + Y+ W
Sbjct: 848 LNSTAISLQWNRVYPDTVQGQLREYRAYYW 877
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|157118545|ref|XP_001659157.1| cell adhesion molecule [Aedes aegypti]
gi|108875668|gb|EAT39893.1| AAEL008340-PA, partial [Aedes aegypti]
Length = 1182
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 262/598 (43%), Gaps = 51/598 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
Y + NVT+ C APKP+ W ++G + +GG+ K+ NG+L I V D+G Y+C
Sbjct: 373 YTVDRRNVTMTCRVFGAPKPEVKWIRNGREL-TGGKFKVEANGDLFIRGVEFSDAGEYTC 431
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + G L+V ++ P + A RC+A + L++ W N
Sbjct: 432 NAVNKLGEKSASGELVVKEHTKIIDE-PQDYEVVAGTPATFRCNAVADSSLELTIEWLTN 490
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G I D E + + + L I+ D G Y C ++ + ++ T+ V P
Sbjct: 491 GETI---DF-ESQPRFVMTNDYSLTISKTIELDTGVYTCFARTDLDEVMANATLTVYDRP 546
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDR 239
P ++ +E H+T AT+ W N PI HY I T++ TW S+ V +
Sbjct: 547 NAPS-LESIECHQTVATLSWKPNGDNRSPILHYTIEFNTSFTPDTWEISSKDVPATDF-- 603
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
S++ + PWS Y F+VIA N++G PS S T P++ P + G G
Sbjct: 604 -----TYSVD--MSPWSNYTFRVIAINKVGPSLPSGHSDVCTTQPSVPFKNPDNVEGQGT 656
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFY 358
+ +L I W P+ + NAP Y+++W+ + + +E + ++ + VVR F
Sbjct: 657 EPNNLVIRWTPMSEIEHNAPRFQYRVYWQLDTGVDHWNTEDIFDWRQSEL-VVRDQETF- 714
Query: 359 YTEYEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQGVFSRGFNSTAINVT------- 410
Y +KV AIN++G + I +S ED P AP N T I VT
Sbjct: 715 -RRYRIKVVAINELGEANVAPKEVIGYSGEDKPLDAPT-------NFTLIQVTAPTSAIL 766
Query: 411 -WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
WNP+ E+IRG G++I+ W + + EE L AL+ PD+ Y ++
Sbjct: 767 SWNPVS--EESIRGHFKGYKIQTWTDADGEENLREILVTADSKQALVTDFVPDSTNYARI 824
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIG 528
+AYN GP S T P+ P+ + + I + ++ P + G
Sbjct: 825 LAYNGRFNGPPSTTLSFDT----PEGVPNTIQTLDAIPLGSSAFLLKWKKPLQPNGKLTG 880
Query: 529 YKVRVWEVDQD-----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
YK+ EV M R P +A + L P +Y + V+ + G+G+
Sbjct: 881 YKIYYEEVKGTSFGPRMEREPHIHDP--KITEAKLGKLKPNTKYRVHVVGTTKAGEGQ 936
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 148/629 (23%), Positives = 243/629 (38%), Gaps = 114/629 (18%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E C PKP +W +G + RR++ N + + + + D+G Y
Sbjct: 281 AAEDETAEFTCEASGVPKPNIIWIHNGKPLDQSKPNPRRQVSSN-RIYFTKLEKGDTGNY 339
Query: 59 SCTATNVHGMDESKGRLIVLH-GPSYYEQLPPKITIAA-HRNLQLRCSAHTEELLDVAYI 116
C ATN G L VL P E PPK+ RN+ + C +V
Sbjct: 340 GCNATNSLGYVYKDVYLNVLALAPEITE--PPKLEYTVDRRNVTMTCRVFGAPKPEVK-- 395
Query: 117 WTHNGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVV------KSTVGKIS 169
W NG EL ++ G L I F+DAGEY C KS G++
Sbjct: 396 WIRNG--------RELTGGKFKVEANGDLFIRGVEFSDAGEYTCNAVNKLGEKSASGELV 447
Query: 170 TKT-TVIVEGP------PGLPGGVQVVEVHKTS--ATIQWTDGATNGRPI---THYKIIA 217
K T I++ P G P + V +S TI+W TNG I + + +
Sbjct: 448 VKEHTKIIDEPQDYEVVAGTPATFRCNAVADSSLELTIEW---LTNGETIDFESQPRFVM 504
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE--LGYGEPSS 275
+++ T I K ++ TG V ++ + + N Y P++
Sbjct: 505 TNDYSLT--------ISKTIELDTG--------VYTCFARTDLDEVMANATLTVYDRPNA 548
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 335
PS + + + +Q + ++SW+ P +P ++Y I + +T F
Sbjct: 549 PSLE----SIECHQTVA------------TLSWK--PNGDNRSPILHYTIEF----NTSF 586
Query: 336 QSETLKEYGNVGIAVVRIP-SEFYY-------TEYEVKVQAINDVGPG-PESEVVTIFSA 386
+T + I+ +P ++F Y + Y +V AIN VGP P +
Sbjct: 587 TPDTWE------ISSKDVPATDFTYSVDMSPWSNYTFRVIAINKVGPSLPSGHSDVCTTQ 640
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV-YY 445
+P P V +G + + W P+ I N +R+ YW+ D T V ++
Sbjct: 641 PSVPFKNPDNVEGQGTEPNNLVIRWTPMSEIEHN--APRFQYRV-YWQLD----TGVDHW 693
Query: 446 LSRTTRNW---ALIVGLQPD-TKYYVKVMAYNNAGEGPESERYL--ERTYRKAPQKPPSA 499
+ +W L+V Q +Y +KV+A N GE + + + K P +
Sbjct: 694 NTEDIFDWRQSELVVRDQETFRRYRIKVVAINELGEANVAPKEVIGYSGEDKPLDAPTNF 753
Query: 500 VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV 559
I+ PT+ ++W VS GYK++ W D D I+ ++ A +
Sbjct: 754 TLIQVTAPTSAILSWNPVSEESIRGHFKGYKIQTW-TDADGEENLREILVTADSKQALVT 812
Query: 560 DLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D P + R+LA+ +GR + P T
Sbjct: 813 DFVPDSTNYARILAY----NGRFNGPPST 837
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 68/170 (40%), Gaps = 11/170 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIY 58
A G + IFC P P+ VW KDG I KI +N +L+I S +D G Y
Sbjct: 189 ALRGKKIEIFCIYGGTPLPQVVWTKDGRPIQWSD--KIQQNNYGKSLVIKHASFEDQGTY 246
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C ++N G ES + + Y+ + P A + C A ++ IW
Sbjct: 247 TCESSNGVGSAESYSIRLEVQAVPYFTKEPEIYNAAEDETAEFTCEASGVPKPNI--IWI 304
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
HNG + N P + + T D G Y C +++G +
Sbjct: 305 HNGKPLDQSKPN----PRRQVSSNRIYFTKLEKGDTGNYGCNATNSLGYV 350
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 24/256 (9%)
Query: 380 VVTIFSAEDMPQV---APQGVFSR---------GFNSTAINVTWNPIELIRENIRGRLIG 427
V T F+ D+ +V A V+ R + T ++W P + R ++
Sbjct: 522 VYTCFARTDLDEVMANATLTVYDRPNAPSLESIECHQTVATLSWKP----NGDNRSPILH 577
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLE 486
+ I++ P+ + ++ V + P + Y +V+A N G P +
Sbjct: 578 YTIEFNTSFTPDTWEISSKDVPATDFTYSVDMSPWSNYTFRVIAINKVGPSLPSGHSDVC 637
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T P K P V +G P + + W +S P Y+V W++D + N
Sbjct: 638 TTQPSVPFKNPDNVEGQGTEPNNLVIRWTPMSEIEHNAPRFQYRV-YWQLDTGVDHWNTE 696
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
I + + D +RY ++V+A + G+ ++ + GE+K P
Sbjct: 697 DIFDWRQSELVVRDQETFRRYRIKVVAINELGEANVAPKEVIGYSGEDK------PLDAP 750
Query: 607 ASTTLLLVMSSTLYIF 622
+ TL+ V + T I
Sbjct: 751 TNFTLIQVTAPTSAIL 766
>gi|330864743|ref|NP_001193491.1| neuronal cell adhesion molecule [Bos taurus]
Length = 1180
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 259/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 457 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 514
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L +W + + N
Sbjct: 515 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-- 571
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + + D G Y CV +T+ +S + V P
Sbjct: 572 -----DGRFTVDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYD 626
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E V G +
Sbjct: 627 VPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQ 685
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G
Sbjct: 686 T---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEG 736
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 737 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 793
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 794 TF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 851
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 852 L--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 909
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 910 RVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTEY 966
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A + G G +++ A
Sbjct: 967 TLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNFSTRYKFYFYAQTAAGSGIQITEEA 1025
Query: 587 IT 588
IT
Sbjct: 1026 IT 1027
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 127/615 (20%), Positives = 227/615 (36%), Gaps = 74/615 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 360 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 418
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT------- 118
+G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 419 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEW 469
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + E + + G LEI A G Y CV ++ +G + ++
Sbjct: 470 FKGAKGSALR----EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKD 525
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNVS 229
P ++++ A +Q + + H + +I W N F V
Sbjct: 526 P------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDGRFTVD 578
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKP 287
+ ++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 579 KDRLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP---- 628
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 346
P + + +SW P + N+P + I + ++ + G
Sbjct: 629 -NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVPGTQ 685
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 686 TTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGSE 740
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 741 PDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFV 796
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A N+AG PE + + P P V + +N T V W V
Sbjct: 797 PYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR 856
Query: 524 EPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ ++R + G+ + L P Y + V + G
Sbjct: 857 GHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 916
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 917 EGP-ASPDKVFNTPE 930
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 266 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 324
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 325 NALGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 381
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 382 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 434
>gi|348513039|ref|XP_003444050.1| PREDICTED: neuronal cell adhesion molecule-like [Oreochromis
niloticus]
Length = 1268
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 245/537 (45%), Gaps = 41/537 (7%)
Query: 12 CNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70
C+ +P PK W KD + I + +NG L I +G Y+C ATN G+ E
Sbjct: 462 CSSFGSPMPKITWFKDTWSSILQEDPYILHDNGTLEIRIAQAQHNGKYTCVATNGLGIYE 521
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130
+ L V P+ + P + R++ C+ + L W + G + +
Sbjct: 522 NHVYLEVKE-PTRILKQPEYKEVQRGRSVVFECTVKHDPSLIPTMTWLKDD---GELPDD 577
Query: 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
E + +D L IT+ + DAG Y C++ +T+ S + V P P +++ +
Sbjct: 578 E----RLIVDSDSLTITDVTEDDAGVYTCIMNTTLDHDSATAKLTVVERPDPPTDLELTD 633
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASI 248
K S + WT G + P+ + I + + W N++E V G + +
Sbjct: 634 QKKRSVQLTWTPGDEHNSPVQKFLIQYEDSLHHRGHWHNLTE-VPGTKTTAHLK------ 686
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
L P Y F+V+A N +G+ PS PS Y T P + P+ + G G + +L ISW
Sbjct: 687 ---LSPHVHYTFRVLALNAVGFSNPSRPSRMYKTEPAAPDENPTGVQGFGTEHNNLVISW 743
Query: 309 EPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
+PL + N P ++YK+ WR KK ++E+ T+ N V P+ + YE+KVQ
Sbjct: 744 KPLTNLQSNGPGLHYKVMWRQKKVESEWNIVTVS--NNSKFVVSGTPT---FVPYEIKVQ 798
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A+ND G GP+ + +S ED+P AP+ V + NST + V W+P+ IRG L G
Sbjct: 799 AVNDHGLGPDPAIAHGYSGEDLPVAAPENVHAVVRNSTLVEVFWDPVP--SHLIRGNLKG 856
Query: 428 HRIKYWKE-------DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+++ YW++ D+ E+ + + T+ ++ GL P + Y V YN GEGP
Sbjct: 857 YKVSYWRKHHYKHNPDHMEQDILVFSGNHTQ--GMLPGLHPFSLYLFNVRVYNGKGEGPL 914
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
S +T P P S + + N ++ + W P I GY ++ V+
Sbjct: 915 SVTQQFKTPEGVPGSPTSLI-VTNSNLDSLTLEWS--PPHDHNGHITGYTLKYQPVN 968
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 34/277 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C E P P W K + S + N L I VS D G Y CTA N
Sbjct: 270 GDKLEMECIAEGLPTPHISWTKISGDLPSKRTSFLNYNKTLHIEDVSASDEGDYRCTAKN 329
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
G + V P Y+ +PPK + +A + +L C A + W NG+
Sbjct: 330 QLGSVHHTIHVTVKAAP-YWIDVPPKNLVLAPGESGRLSCLASGTPKPTIT--WAMNGIS 386
Query: 124 IGN--MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
I N DL+ ++ + T+ + Y+C + + G + + V ++ PP
Sbjct: 387 IENSPKDLSR------KVEDDTIIFTDVQPGSSAVYQCNISNEYGYLLSNAFVNVLSEPP 440
Query: 181 GL---PGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P V Q+++ H+ D ++ G P+ KI TWF + I +E
Sbjct: 441 RVLTPPNKVYQIIKNHQA-----LLDCSSFGSPMP--KI--------TWFKDTWSSILQE 485
Query: 237 VDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 272
D Y ++E + ++ +A N LG E
Sbjct: 486 -DPYILHDNGTLEIRIAQAQHNGKYTCVATNGLGIYE 521
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDD----SGIYS 59
N+ I C + P P F W ++G R + ++G L++ +SR+ G+Y
Sbjct: 49 NIIIHCEAKGKPHPSFSWTRNGTHFDVENDRNVDMKPDSGTLVVD-ISRERVEHYEGVYQ 107
Query: 60 CTATNVHG 67
CTA N HG
Sbjct: 108 CTARNKHG 115
>gi|296488521|tpg|DAA30634.1| TPA: neuronal cell adhesion molecule isoform 1 [Bos taurus]
Length = 1302
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 259/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L +W + + N
Sbjct: 534 AKNDVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPN-- 590
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + + D G Y CV +T+ +S + V P
Sbjct: 591 -----DGRFTVDKDRLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E V G +
Sbjct: 646 VPNPPFDLELTDQLDRSVQLSWTPGDDNNSPITKFIIEYEDAMHEPGLWHHQTE-VPGTQ 704
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + L P+ Y F+V+A N LG PS S QY T A +P + P+ + G
Sbjct: 705 T---------TAQLKLSPYVNYSFRVMAENNLGRSLPSEASEQYLTKAAEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND G PE V S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDKVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWEPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A + G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWILKNLNFSTRYKFYFYAQTAAGSGIQITEEA 1044
Query: 587 IT 588
IT
Sbjct: 1045 IT 1046
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 127/615 (20%), Positives = 227/615 (36%), Gaps = 74/615 (12%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C PKP+ W +G I RKI + ++ S V S +Y C A+N
Sbjct: 379 TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSKVQERSSAVYQCNASNE 437
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT------- 118
+G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 438 YGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPLPTIEW 488
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + E + + G LEI A G Y CV ++ +G + ++
Sbjct: 489 FKGAKGSALR----EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNDVHLEIKD 544
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTWFNVS 229
P ++++ A +Q + + H + +I W N F V
Sbjct: 545 P------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTVMWLKDHGELPNDGRFTVD 597
Query: 230 -EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKP 287
+ ++ +V+ G + N + V A L P+ +P+P Y+ P
Sbjct: 598 KDRLVVADVNDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDVP---- 647
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNV 346
P + + +SW P + N+P + I + ++ + G
Sbjct: 648 -NPPFDLELTDQLDRSVQLSW--TPGDDNNSPITKFIIEYEDAMHEPGLWHHQTEVPGTQ 704
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
A +++ Y Y +V A N++G P SE +AE P P V G
Sbjct: 705 TTAQLKLSP---YVNYSFRVMAENNLGRSLPSEASEQYLTKAAE--PDKNPTAVEGLGSE 759
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 760 PDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFV 815
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y +KV A N+AG PE + + P P V + +N T V W V
Sbjct: 816 PYLIKVQALNDAGFAPEPAAVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIR 875
Query: 524 EPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ GY++ W+ ++R + G+ + L P Y + V + G
Sbjct: 876 GHLQGYRIYYWKAQSSLTRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKG 935
Query: 579 DGRMSSPAITFQMGE 593
+G +SP F E
Sbjct: 936 EGP-ASPDKVFNTPE 949
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I V+ DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIVQVTEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NALGAIHHTISVTVKAAP-YWIIAPQNLVLSPEEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + + + Y+C + G + V V P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSKVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
>gi|390477462|ref|XP_002760747.2| PREDICTED: neurofascin isoform 2 [Callithrix jacchus]
Length = 1347
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAIN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVVNSTAINL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
++GY ++
Sbjct: 960 GIMLGYTLK 968
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 139/644 (21%), Positives = 236/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 668 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRV 836
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T +++ W V P + + Y+ W V Q +A+ P G+ L
Sbjct: 837 VNSTAINLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLR 892
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 893 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|440891914|gb|ELR45352.1| Neurofascin, partial [Bos grunniens mutus]
Length = 1272
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 246/548 (44%), Gaps = 59/548 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 451 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 508
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L +A W + + I N
Sbjct: 509 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISN 567
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 568 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLDQATPTNRL 618
Query: 177 ----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 619 AALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG--- 671
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P PS
Sbjct: 672 VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPS 730
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV + R
Sbjct: 731 DVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGSR 783
Query: 353 --IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 784 YVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQ 843
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTK 464
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 844 WN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSN 901
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 902 YKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPNG 958
Query: 525 PIIGYKVR 532
+IGY ++
Sbjct: 959 ILIGYTLK 966
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 141/636 (22%), Positives = 236/636 (37%), Gaps = 99/636 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 350 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 407
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 408 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 458
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 459 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 513
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q + P + +W E +
Sbjct: 514 RLEVKDPTRI-YRMPEDQVAKRGTTVQ-LECRVKHDPSLKLAV--------SWLKDDEPL 563
Query: 233 -----IGKEVDRYT--GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
+ KE D T G E + ST + +A L + ++P+ N A
Sbjct: 564 YISNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLDQATPT---NRLAA 620
Query: 286 KPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 340
P P R ++ DL+ ++W +P + N+P Y + + + +FQ
Sbjct: 621 LPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVW 673
Query: 341 KEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVA 393
++ G+V AV+R+ Y Y+ +V AIN+VG P SE A P+
Sbjct: 674 HDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP--PESN 728
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V G + +TW P+ G ++Y + ET + + T
Sbjct: 729 PSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETWNNVTVWGS 782
Query: 454 ALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N T + +
Sbjct: 783 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 842
Query: 513 TWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADIVDLSP 563
W V + + Y+ W V Q +A P G+ L + L P
Sbjct: 843 QWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAG---FP-GDRLRGVVSRLFP 898
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
Y + ++ + GDG S E KEF +
Sbjct: 899 YSNYKLEMVVVNGRGDGPRS---------ETKEFTT 925
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 260 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 317
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 318 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 374
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 375 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 430
Query: 182 L 182
+
Sbjct: 431 M 431
>gi|83304988|sp|O94856.4|NFASC_HUMAN RecName: Full=Neurofascin; Flags: Precursor
Length = 1347
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 960 GIMIGYTLK 968
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 233/646 (36%), Gaps = 118/646 (18%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 515 RLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWL---KDDEPLYIGNRMK 571
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPK 625
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 626 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDANNSPITDYVVQFE-- 666
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 667 -EDQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 722
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 723 SGAP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRE 774
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE E + + P+ P+ V +
Sbjct: 775 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKV 834
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNT 553
+ +N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 835 RVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDR 890
Query: 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
L + L P Y + ++ + GDG S E KEF +
Sbjct: 891 LRGVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|237858677|ref|NP_001153803.1| neurofascin isoform 2 precursor [Homo sapiens]
Length = 1189
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 856 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 971 GIMIGYTLK 979
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 233/646 (36%), Gaps = 118/646 (18%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 526 RLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWL---KDDEPLYIGNRMK 582
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 583 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPK 636
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 637 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDANNSPITDYVVQFE-- 677
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 678 -EDQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 733
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 734 SGAP--PESNPGDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRE 785
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE E + + P+ P+ V +
Sbjct: 786 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKV 845
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNT 553
+ +N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 846 RVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDR 901
Query: 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
L + L P Y + ++ + GDG S E KEF +
Sbjct: 902 LRGVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|410986305|ref|XP_003999451.1| PREDICTED: neurofascin isoform 3 [Felis catus]
Length = 1351
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 510
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 511 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 569
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 570 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 620
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 621 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 674
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 675 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 732
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 733 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 785
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 786 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 845
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + ++ R R ++ L P +
Sbjct: 846 QWN--RVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYS 903
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 904 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 960
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 961 GILIGYTLK 969
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 137/644 (21%), Positives = 234/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 352 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 409
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 410 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 460
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 461 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 515
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 516 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 565
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 566 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 618
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 619 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 668
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 669 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 725
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 726 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 777
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 778 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 837
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+
Sbjct: 838 LNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPR 893
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 894 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 928
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 262 GMDLVLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 319
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 320 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 376
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 377 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 432
Query: 182 L 182
+
Sbjct: 433 M 433
>gi|410986307|ref|XP_003999452.1| PREDICTED: neurofascin isoform 4 [Felis catus]
Length = 1190
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 247/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 464 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 521
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 522 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 580
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 581 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 631
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 632 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 685
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 686 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 743
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 744 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 796
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 797 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 856
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + ++ R R ++ L P +
Sbjct: 857 QWN--RVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYS 914
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 915 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 971
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 972 GILIGYTLK 980
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 137/644 (21%), Positives = 234/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 363 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 420
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 421 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 471
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 472 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 526
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 527 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 576
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 577 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 629
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 630 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 679
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 680 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 736
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 737 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 788
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 789 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 848
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+
Sbjct: 849 LNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPR 904
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 905 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 939
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 273 GMDLVLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 331 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 387
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 388 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 443
Query: 182 L 182
+
Sbjct: 444 M 444
>gi|427792699|gb|JAA61801.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1314
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/581 (25%), Positives = 262/581 (45%), Gaps = 32/581 (5%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
VT+ C AP+P+ W K+ + +GGR ++ ++G+L I + D G Y+C A+N G
Sbjct: 502 VTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFG 560
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+ G L V G + Q P +AA ++ RC+A + L++ W NG +
Sbjct: 561 DASASGSLEV-KGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP- 618
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
E + + L IT D+G Y CV ++ + + T+ V+ P P V+
Sbjct: 619 ---EADARMVQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVK 675
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEA 246
+ + A ++W PI Y I T+++ TW + ++ +
Sbjct: 676 I-DCDGLMALVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT--------- 725
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + PW+ Y F+V+A N++G PS S + TP D P++ P R+ G G + +L I
Sbjct: 726 KFKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLI 785
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
+W P+P + NAP +YK+ W++ + D + S ++++ P+ + Y +
Sbjct: 786 TWTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRI 842
Query: 365 KVQAINDVGPGPESEVVTI-FSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIELIRENIR 422
KV+A N G + I +S E++P APQ + ++ N TW+P+ E++R
Sbjct: 843 KVEAHNRRGQAHTAATEVIGYSGENVPLAAPQDFKLANVVDARTANFTWSPVS--PESVR 900
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
G G++I+ W D EE + A + +P ++ V V+ +N+ GP S+
Sbjct: 901 GHFRGYKIQTWTPDEGEEKLREVVVPANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSD 960
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-QDMS 541
T P P ++ + T +++ W+ P + GY + EV +
Sbjct: 961 SIEFSTPEGVP-GPVASFEGIPMGSTGIYLLWK--RPLETNGVLTGYHIYYEEVRGTQLG 1017
Query: 542 RANDTIIPVGNTLD--ADIVDLSPGKRYHMRVLAFSNGGDG 580
+ PV + L+ A + L P +Y + + A + G G
Sbjct: 1018 PKMERQPPVRDPLESRAKLAGLKPRTKYRITIHAATAQGQG 1058
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 109/555 (19%), Positives = 188/555 (33%), Gaps = 75/555 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYS 59
A G + ++C P P+ W K G RR + N L I VS +D G Y
Sbjct: 311 ALRGHELKLYCIYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYE 368
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G+ ++ + + Y+ ++P A ++ C+A + + W
Sbjct: 369 CQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFV 426
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + + N P ++G LL I + D Y+C + G + ++
Sbjct: 427 NGVPVEKAEPN----PRRKVEGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYLNVLAL 482
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP + T A Q T R ++ W ++ + G
Sbjct: 483 PPTI-----------TEAPEQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQELTGGRY- 530
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS------------SPSPQYNTPADK 286
R + I+++LV E+ A N+ G S P Y ADK
Sbjct: 531 RVLDSGDLQIDDLLVT-DQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENYEVAADK 589
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
A R +L I W +F + D E + ++ G+
Sbjct: 590 --SATFRCNAEADPSLELKIEW----------------LFNGQPVDPEADARMVQA-GDN 630
Query: 347 GIAVVR---IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ + R + S Y ++ + + +D+P P + +
Sbjct: 631 SLTITRTIELDSGIYTCVARTELDS---------DRAQATLTVQDVPN--PPQMVKIDCD 679
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
V W P + R ++ + I+Y +P+ +++ + V + P
Sbjct: 680 GLMALVEWKPT----GDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDTKFKVSMSPWA 735
Query: 464 KYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +V+A N G P T P K P V +G + +TW + P
Sbjct: 736 NYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEH 795
Query: 523 EEPIIGYKVRVWEVD 537
P YKV +W+ D
Sbjct: 796 NAPGFFYKV-LWKRD 809
>gi|119603834|gb|EAW83428.1| neuronal cell adhesion molecule, isoform CRA_b [Homo sapiens]
Length = 1305
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/609 (26%), Positives = 265/609 (43%), Gaps = 63/609 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 528 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 582 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 639
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 640 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 693
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 694 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 749
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 750 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 806
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 807 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 864
Query: 416 LIRENIRGRLIGHR-------IKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPD 462
L ++IRG L G+R I YWK + + ++ + ++ ++ GL+P
Sbjct: 865 L--KSIRGHLQGYRASERGPFIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPF 922
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ Y + V N GEGP S + T P P S +K +NPT +T + PS
Sbjct: 923 SHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHP 979
Query: 523 EEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ Y ++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 980 NGILTEYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSG 1038
Query: 581 -RMSSPAIT 588
+++ A+T
Sbjct: 1039 SQITEEAVT 1047
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 114/533 (21%), Positives = 196/533 (36%), Gaps = 62/533 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 483
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 484 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 534
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 535 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 586
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 587 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 641
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 642 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 694
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 695 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 751
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 752 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 807
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
Y +KV A N+ G PE + + P P V + +N T V W
Sbjct: 808 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHW 860
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 337 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 394 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|359073801|ref|XP_003587093.1| PREDICTED: neurofascin [Bos taurus]
gi|296479435|tpg|DAA21550.1| TPA: neurofascin homolog (chicken) isoform 3 [Bos taurus]
Length = 1188
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 462 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 519
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L +A W + + I N
Sbjct: 520 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISN 578
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 579 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 629
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 630 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 683
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 684 -VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 741
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 742 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 794
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 795 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 854
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 855 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYS 912
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 913 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 969
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 970 GILIGYTLK 978
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 137/644 (21%), Positives = 231/644 (35%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 361 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 418
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 419 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 469
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 470 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 524
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQW-------------TDGATNGRPITHYKIIART 219
+ V+ P + + +V K T+Q + P+ + +
Sbjct: 525 RLEVKDPTRI-YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKE 583
Query: 220 NWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
+ T F V+E V E+D+ + + VL +T ++ A L G
Sbjct: 584 EDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPKGR 637
Query: 273 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 332
P P T + + S+ +P + N+P Y + + +
Sbjct: 638 PDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYVVQFE---E 677
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 678 DQFQPGVWHDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 734
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 735 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 786
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 787 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 846
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V + + Y+ W V Q +A P G+ L
Sbjct: 847 LNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAG---FP-GDRLR 902
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 903 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 937
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 328
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 385
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 441
Query: 182 L 182
+
Sbjct: 442 M 442
>gi|281341481|gb|EFB17065.1| hypothetical protein PANDA_006672 [Ailuropoda melanoleuca]
Length = 1344
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + S Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI +
Sbjct: 785 RYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAITL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + ++ R R ++ L P +
Sbjct: 845 QWN--RVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 960 GILTGYTLK 968
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 141/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S R E ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K TW E +
Sbjct: 515 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVTWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + IA EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 668 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 777 NNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 836
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+
Sbjct: 837 LNSTAITLQWNRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPR 892
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 893 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|119603833|gb|EAW83427.1| neuronal cell adhesion molecule, isoform CRA_a [Homo sapiens]
Length = 1181
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/609 (26%), Positives = 265/609 (43%), Gaps = 63/609 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 451 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 508
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + ++ + P + + C + L + +W + N +
Sbjct: 509 AKNEVHLEIKDA-TWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 562
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 563 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 620
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 621 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 674
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 675 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 730
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 731 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 787
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 788 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 845
Query: 416 LIRENIRGRLIGHR-------IKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPD 462
L ++IRG L G+R I YWK + + ++ + ++ ++ GL+P
Sbjct: 846 L--KSIRGHLQGYRASERGPFIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPF 903
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ Y + V N GEGP S + T P P S +K +NPT +T + PS
Sbjct: 904 SHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHP 960
Query: 523 EEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ Y ++ ++ ++ D IP N + +L+ RY A ++ G G
Sbjct: 961 NGILTEYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSG 1019
Query: 581 -RMSSPAIT 588
+++ A+T
Sbjct: 1020 SQITEEAVT 1028
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 114/533 (21%), Positives = 196/533 (36%), Gaps = 62/533 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 350 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 406
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 407 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 464
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G K V +
Sbjct: 465 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGM--AKNEVHL 515
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E + +V+ A +Q + + H ++ T W + + E
Sbjct: 516 E----IKDATWIVK-QPEYAVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 567
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 568 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 622
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 623 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 675
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 676 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 732
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 733 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 788
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
Y +KV A N+ G PE + + P P V + +N T V W
Sbjct: 789 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHW 841
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 260 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 317
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 318 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 374
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 375 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 428
>gi|301765662|ref|XP_002918248.1| PREDICTED: neurofascin-like isoform 2 [Ailuropoda melanoleuca]
Length = 1189
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + S Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI +
Sbjct: 796 RYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAITL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + ++ R R ++ L P +
Sbjct: 856 QWN--RVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQASFPGDRPRGVVSRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 971 GILTGYTLK 979
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 141/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S R E ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K TW E +
Sbjct: 526 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVTWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + IA EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 679 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 788 NNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+
Sbjct: 848 LNSTAITLQWNRVYPDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FP-GDRPR 903
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 904 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|156396450|ref|XP_001637406.1| predicted protein [Nematostella vectensis]
gi|156224518|gb|EDO45343.1| predicted protein [Nematostella vectensis]
Length = 1349
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 46/500 (9%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
I C+ AAP VW KD ++ GR + +L+I+PV ++D G Y+C ATN+ G D
Sbjct: 523 IKCDSNAAPAANHVWSKDDQVLSISGRYSLGPGNSLVITPVQQNDEGKYTCKATNLLGTD 582
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDV-AYIWTHNGVRIGNM 127
V + + + + RC A + L+++ Y W +G
Sbjct: 583 TKSNDATVYERTKITVRPDASVELIKGKPTDFRCQATADPRLMNILKYKWLKDGT----- 637
Query: 128 DLNELE-TPNIN-IDGGL-LEITNASFADAGEYECVV----KSTVGKISTKTTVIVEGPP 180
EL+ T NIN I L L+++ A D Y CV K + + V+G P
Sbjct: 638 ---ELQYTENINWIPNQLRLKLSEADIDDGAVYTCVAYTDDKLKYSEDRASSIANVQGVP 694
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P + + + + I W G++ G+PITHY+I + F I K+VD
Sbjct: 695 FPPSNLTITNCYNLTTVITWVPGSSTGKPITHYQIEQESE-----FEAGVWQILKKVD-- 747
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKPYQAPSRIGGGG 298
K S++ L PW+ F++ A N +G S P+P T +P P G
Sbjct: 748 -DPKSTSLQLQLTPWAKLRFRMRAVNSVGPSRASLPTPVGACETKVSRPTMVPKNFRGVP 806
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
GK +L +W PL + +QNAP Y + +RK ++Q T+ N A I + Y
Sbjct: 807 GKANELDAAWTPLTKLEQNAPGCKYVLKYRKSGAKDWQKVTID---NPSTAKYSILNPGY 863
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y +E + A ND+G GP+S+++ S +D P+ P+ + + +++TW+ + + R
Sbjct: 864 YELWEFMIYATNDIGDGPQSDIIKSRSGQDAPKDKPKNLKKGVVTARTVSLTWDRVTVDR 923
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAV--------------YYLSRTTR--NWALIVGLQPD 462
++ G + H K + N +ET V Y L+ T++ + GL P
Sbjct: 924 GSVDGYISYHWFKTIETQNDQETPVRTRRRREIPVGAQTYKLNATSQPSQSGTVRGLTPF 983
Query: 463 TKYYVKVMAYNNAGEGPESE 482
+ Y + + A+N+ GEGPES+
Sbjct: 984 SSYTLVLKAFNSGGEGPESD 1003
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 44 NLLISPVSRDD-SGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQL 101
NL+IS VS++ G+Y C N G ES+ +L V P + + PPK+ I + L
Sbjct: 374 NLIISQVSKEQHEGVYQCIVENNQGKTESQLSQLKVFVPPGWIVKPPPKMNIPMYGGAVL 433
Query: 102 RCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
C A + AY W NG +I N L N + +E+ + AG Y+CV
Sbjct: 434 LCEAFGDPT--PAYGWYVNGSKIVNS--QHLIVTNNKLTFKAVEL----YEHAGIYQCVA 485
Query: 162 KSTVGKISTKTTVIVEG-PPGLPG 184
++ G + + T V ++ PG+ G
Sbjct: 486 ENDYGMVVSTTVVEIDARKPGIIG 509
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 36/262 (13%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE---DMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ + +++A+N VGP S + + E P + P+ + ++ W P+
Sbjct: 761 WAKLRFRMRAVNSVGPSRASLPTPVGACETKVSRPTMVPKNFRGVPGKANELDAAWTPLT 820
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY----VKVMA 471
+ +N G + +KY K + V + +T ++++ + YY + A
Sbjct: 821 KLEQNAPG--CKYVLKYRKSGAKDWQKVTIDNPSTAKYSIL-----NPGYYELWEFMIYA 873
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+ G+GP+S+ R+ + AP+ P + + TV +TW V+ + + GY
Sbjct: 874 TNDIGDGPQSDIIKSRSGQDAPKDKPKNLKKGVVTARTVSLTWDRVT--VDRGSVDGYIS 931
Query: 532 RVW----EVDQDMSRANDTI----IPVGN-----------TLDADIVDLSPGKRYHMRVL 572
W E D T IPVG + + L+P Y + +
Sbjct: 932 YHWFKTIETQNDQETPVRTRRRREIPVGAQTYKLNATSQPSQSGTVRGLTPFSSYTLVLK 991
Query: 573 AFSNGGDGRMSSPAITFQMGEE 594
AF++GG+G S AITF E+
Sbjct: 992 AFNSGGEGPESD-AITFDTNED 1012
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 35/286 (12%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
+ +EF + A N++G G P S + + D P P + G +S++W+ + +
Sbjct: 864 YELWEFMIYATNDIGDG-PQSDIIKSRSGQDAPKDKPKNLKKGVVTARTVSLTWDRVTVD 922
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSET-----LKEYGNVGIAVVRI-----PSE-------F 357
+ + + Y W K +T+ ET + VG ++ PS+
Sbjct: 923 RGSV-DGYISYHWFKTIETQNDQETPVRTRRRREIPVGAQTYKLNATSQPSQSGTVRGLT 981
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++ Y + ++A N G GPES+ +T + ED+P + V F + I W P +
Sbjct: 982 PFSSYTLVLKAFNSGGEGPESDAITFDTNEDVPGIVAD-VDVTPF-AKYIFAQWGPP--L 1037
Query: 418 RENIRGRLIGHRIKYWKE-----DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
N G L+G+ I K D P + + T + L ++ ++ Y + + A
Sbjct: 1038 ESN--GVLLGYAIAAVKHTQGQPDPPMNSVKFTELGTNKLEHLFEDVEQESHYIIYLKAK 1095
Query: 473 NNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWRY 516
G GP Y ER P P P A + G +V+VT+ +
Sbjct: 1096 TRIGYGP---VYTERVDTIKPSAPAKPRAPFVVGYETDSVNVTFLF 1138
>gi|1480094|emb|CAA99303.1| neuron-glia cell adhesion molecule (Ng-CAM) [Gallus gallus]
Length = 1280
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 255/611 (41%), Gaps = 63/611 (10%)
Query: 7 NVTIF--CNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
N T+F C AP P W R +F NG+L +S V D G+Y+C A
Sbjct: 437 NQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRLSAVRGGDGGVYTCMAQ 496
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGV 122
N H + S L+ + P+ P T + C A + + + W G
Sbjct: 497 NAHS-NGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQ 555
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
+ + P ++ L ++N + D G +C + + + + V G PG
Sbjct: 556 PLPD-------DPRYSVAAETLTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPGP 608
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT- 241
+QV+EV + + WT G + PI + + S G+ +R T
Sbjct: 609 IRDLQVMEVDEHRVRLSWTPGDDHNSPIEKFVVKEEEGIFSA---------GRFAERLTV 659
Query: 242 -GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G + + L P+ + F+V+A N G GE S+PS TP P + P + G G +
Sbjct: 660 PGGQPWTPPLPLSPYGRFRFRVVAVNAYGRGEHSAPSAPIETPPAAPERNPGGVHGEGNE 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRIPSEF 357
G+L I+WEPLP + NAP + Y++ WR + + V V +
Sbjct: 720 TGNLVITWEPLPPQAWNAPWVRYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLP 779
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN----P 413
++ ++++VQA+N G GPE+ S ED+P V P+ V NS+ + V W P
Sbjct: 780 PFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWTLGGGP 839
Query: 414 IELIRENIRGRLIGHRIKYWK------------------------EDNPEETAVYYLSRT 449
EL RGRL G R+ YW+ ED P V
Sbjct: 840 KEL-----RGRLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVALTVGG 894
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
AL+ GL+P ++Y ++V+ +N G+GP SE T P PP + ++ ++ T
Sbjct: 895 DARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEGVP-GPPEELRVERLDDTA 953
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+ V W+ P + GY +R +V+ + + P G TL+A + L+ RY +
Sbjct: 954 LSVHWK--RPRHLNGVLTGYVLRYQQVEPALGLPQEAPYPPG-TLNATLRGLNARSRYRL 1010
Query: 570 RVLAFSNGGDG 580
+ A + G G
Sbjct: 1011 ALRASTRVGSG 1021
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 135/644 (20%), Positives = 233/644 (36%), Gaps = 102/644 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSC 60
G G + C P+P+ W +G I + G R+ G L++ + +DS + C
Sbjct: 341 GPGETARLDCEVGGKPRPQIQWSINGVPIDALPGAERRWLRGGALVLPELRPNDSAVLQC 400
Query: 61 TATNVHGMDESKGRLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
A N HG + L V+ P + EQ + + ++ + L C +V ++
Sbjct: 401 EARNRHGRLLANAFLHVVELPVRMLTADEQ---RYEVVENQTVFLHCRTFGAPAPNVEWL 457
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ + + G L ++ D G Y C+ ++ S + V
Sbjct: 458 -------TPTLEPALQDDRSFVFTNGSLRLSAVRGGDGGVYTCMAQNAHSNGSLTALLEV 510
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P + + K T+ + GAT +T ++ W + + +
Sbjct: 511 RAPTRISAPPRSATAKK-GETVTFHCGATFDPAVTPGEL--------RWLRGGQPL--PD 559
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP-YQAPSRIG 295
RY+ + E + V + + YG+ + + +TP D +A R+
Sbjct: 560 DPRYS----VAAETLTV------------SNVDYGDEGTIQCRASTPLDSAEAEAQLRVV 603
Query: 296 GGGGKIGDLSI----------SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
G G I DL + SW P + N+P + F K+ + F + E
Sbjct: 604 GRPGPIRDLQVMEVDEHRVRLSW--TPGDDHNSP---IEKFVVKEEEGIFSAGRFAERLT 658
Query: 346 VGIAVVRIPSEFY--YTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGF 402
V P Y + +V A+N G G S I + P+ P GV G
Sbjct: 659 VPGGQPWTPPLPLSPYGRFRFRVVAVNAYGRGEHSAPSAPIETPPAAPERNPGGVHGEGN 718
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA-------- 454
+ + +TW P+ N + +R+++ P E WA
Sbjct: 719 ETGNLVITWEPLPPQAWN--APWVRYRVQW----RPLEEPGGGGPSGGFPWAESTVDAPP 772
Query: 455 -LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
++ GL P + + ++V A N AG+GPE+ + + P P V ++ +N +TV V
Sbjct: 773 VVVGGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVR 832
Query: 514 WRYVS-PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---------------------- 550
W P + G++V W + R+ P
Sbjct: 833 WTLGGGPKELRGRLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVALTV 892
Query: 551 -GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
G+ A + L P RY +RVL F+ GDG S P I F+ E
Sbjct: 893 GGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEP-IAFETPE 935
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 12/169 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A GG+V + C E P P W++ + G R EN N L + V+ D G Y
Sbjct: 251 ALRGGSVVLECIAEGLPTPWVRWRR---LNGPLPTRAALENFNKTLRLWGVTESDDGEYE 307
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ + P +L C + + W+
Sbjct: 308 CVAENGRGTARGTHSVTVEAAP-YWVRRPQSGVFGPGETARLDCEVGGKPRPQIQ--WSI 364
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
NGV I + E + GG L + D+ +C ++ G++
Sbjct: 365 NGVPIDALPGAERRW----LRGGALVLPELRPNDSAVLQCEARNRHGRL 409
>gi|148704862|gb|EDL36809.1| mCG125252 [Mus musculus]
Length = 1254
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/601 (27%), Positives = 259/601 (43%), Gaps = 55/601 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 424 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 481
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 482 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 540
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ D L +++ D G Y C +T+ S + V P P +++
Sbjct: 541 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLEL 593
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN-VSEHVIGKEVDRYTG---RK 244
S + WT G N PIT + W WF V+E +I E + R
Sbjct: 594 TNQLDKSVQLTWTPGDDNNSPIT-------SMW---WFGFVAEFIIEYEDAMHDAGLWRH 643
Query: 245 EASIENV-------LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+A + L P+ Y F+V+A N +G PS S QY T A +P Q P + G
Sbjct: 644 QAEVSGTQTTAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGL 703
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 704 GTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPT 760
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
F Y +KVQA+NDVG PE V S ED+P VAP V NST V W+P+
Sbjct: 761 F--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP- 817
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVM 470
+++RG L G+RI YWK + + ++ + T+ ++ GLQP + Y + V
Sbjct: 818 -PKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVR 876
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 877 VVNGKGEGPASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYI 933
Query: 531 VRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAI 587
++ ++ ++ D IP N + +L+ RY A ++ G G +++ AI
Sbjct: 934 LQYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEAI 992
Query: 588 T 588
T
Sbjct: 993 T 993
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 233 GNVLSLECIAEGLPTPIIYWIKEDGMLPA--NRTFYRNFKKTLQITHVSEADSGNYQCIA 290
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 291 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 347
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 348 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 401
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 323 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 381
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 382 ASNKYGYLLANAFVNVL-------AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 432
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 433 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 488
Query: 175 IVEGP 179
++ P
Sbjct: 489 EIKDP 493
>gi|301755691|ref|XP_002913689.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule-like
[Ailuropoda melanoleuca]
Length = 1304
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K G+ R + +NG+L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GNALREDSYVFHKNGSLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + +Q P + + C + + L W + + N
Sbjct: 534 AKNEVHLEIKDATRIIKQ-PEYAVVQRGGTVSFECRVNHDHTLIPTITWLKDNGELPN-- 590
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + D G Y CV +T+ +S + V P
Sbjct: 591 -----DGRFTVDKDHLVVADVRDDDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGNDNNSPITKFIIEYEDAMHEAGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N LG PS S QY T A +P P+ + G
Sbjct: 700 ----VSGMQTTAQLKLSPYVNYSFRVMAVNSLGRSLPSEASEQYLTKAAEPDTNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + +L + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKAQSSSKRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A + G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 132/620 (21%), Positives = 224/620 (36%), Gaps = 74/620 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G + C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDGR--LICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSSVQERSSVVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I AA N + A LLD A+ +
Sbjct: 432 CNASNEYGYLLANAFVNVLAE-------PPRILTAA--NTLYQVIADRPALLDCAFFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + GN E + G LEI A G Y CV ++ +G K
Sbjct: 483 LPTIEWFKGAK-GNA---LREDSYVFHKNGSLEIPVAQKDSTGTYTCVARNKLGM--AKN 536
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NST 224
V +E + ++++ + + + + R + +I W N
Sbjct: 537 EVHLE----IKDATRIIKQPEYAVVQRGGTVSFECRVNHDHTLIPTITWLKDNGELPNDG 592
Query: 225 WFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNT 282
F V +H++ +V G + N + V A L P+ +P+P Y+
Sbjct: 593 RFTVDKDHLVVADVRDDDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYDV 646
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLK 341
P P + + +SW P N+P + I + ++ +
Sbjct: 647 P-----NPPFDLELTDQLDKSVQLSW--TPGNDNNSPITKFIIEYEDAMHEAGLWHHQTE 699
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
G A +++ Y Y +V A+N +G P SE +AE P P V
Sbjct: 700 VSGMQTTAQLKLSP---YVNYSFRVMAVNSLGRSLPSEASEQYLTKAAE--PDTNPTAVE 754
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 755 GLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 810
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 811 TPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W+ R + G+ + L P Y + V
Sbjct: 871 LKSIRGHLQGYRIYYWKAQSSSKRNRRHLEKKILTFQGSKTHGMLPGLEPFSHYTLNVRV 930
Query: 574 FSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 931 VNGKGEGP-ASPDRVFNTPE 949
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 25/272 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + K F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYKNFKK-TLQIIQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + +L C A+ ++ W NGV
Sbjct: 344 NSLGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGRLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPPG 181
I + P+ IDG + ++ + Y+C + G + V+ E P
Sbjct: 401 IEIAP----DDPSRKIDGDTIIFSSVQERSSVVYQCNASNEYGYLLANAFVNVLAEPPRI 456
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
L + +V + D A G P+ + WF ++ +E D Y
Sbjct: 457 LTAANTLYQVIADRPAL--LDCAFFGSPLPTIE----------WFKGAKGNALRE-DSYV 503
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 272
K S+E V ST + +A N+LG +
Sbjct: 504 FHKNGSLEIPVAQKDSTGTYTCVARNKLGMAK 535
>gi|1621283|gb|AAC50765.1| hBRAVO/Nr-CAM precursor [Homo sapiens]
Length = 1299
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 168/612 (27%), Positives = 265/612 (43%), Gaps = 76/612 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLIS---------PVSRDDS-GIY 58
C +P P W K GS I+ ENG L I PV++ DS G Y
Sbjct: 471 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIKDATWIVKEIPVAQKDSTGTY 528
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C A N GM +++ L P Y + + C + L + +W
Sbjct: 529 TCVARNKLGMAKNEVHL----QPEY-------AVVQRGSMVSFECKVKHDHTLSLTVLWL 577
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ N +L E +D L + + S D+G Y CV +T+ +S + V
Sbjct: 578 KD-----NRELPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVA 630
Query: 179 P----------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWF 226
P P P +++ + S + WT G N PIT + I + W
Sbjct: 631 PTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWH 690
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+ +E + + + L P+ Y F+V+A N +G PS S QY T A +
Sbjct: 691 HQTE----------VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 740
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 345
P + P+ + G G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + N
Sbjct: 741 PDKNPTAVEGLGSEPDNLEITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---AN 797
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
V +V F Y +KVQA+ND+G PE VV S ED+P VAP V NST
Sbjct: 798 VSKYIVSGTPTF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNST 855
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGL 459
V W+P+ L ++IRG L G+RI YWK + + ++ + ++ ++ GL
Sbjct: 856 LAEVHWDPVPL--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGL 913
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+P + Y + V N GEGP S + T P P S +K +NPT +T + P
Sbjct: 914 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPP 970
Query: 520 SFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
S + Y ++ ++ ++ D IP N + +L+ RY A ++
Sbjct: 971 SHPNGILTEYTLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSA 1029
Query: 578 GDG-RMSSPAIT 588
G G +++ A+T
Sbjct: 1030 GSGSQITEEAVT 1041
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 133/625 (21%), Positives = 226/625 (36%), Gaps = 84/625 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 370 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 426
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 427 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 484
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA----------DAGEYECVVKSTVG 166
G + + D+ L + G LEI +A++ G Y CV ++ +G
Sbjct: 485 KGAKGSAL-HEDIYVLH------ENGTLEIKDATWIVKEIPVAQKDSTGTYTCVARNKLG 537
Query: 167 KISTKTTV-----IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
+ + +V+ + +V H S T+ W R
Sbjct: 538 MAKNEVHLQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-------------NRELP 584
Query: 222 NSTWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQ 279
+ F V +H++ +V + N + V A L P+ +P+P
Sbjct: 585 SDERFTVDKDHLVVADVSDDDSGTYTCVANTTLD------SVSASAVLSVVAPTPTPAPV 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEF 335
Y+ P P + + +SW P + N+P I Y+ K
Sbjct: 639 YDVP-----NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHH 691
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAP 394
Q+E G A +++ Y Y +V A+N +G SE + + P P
Sbjct: 692 QTEV---SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNP 745
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
V G + +TW P+ N G + +++ + ++D +E ++ ++
Sbjct: 746 TAVEGLGSEPDNLEITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--Y 801
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++ G Y +KV A N+ G PE + + P P V + +N T V W
Sbjct: 802 IVSGTPTFVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHW 861
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYH 568
V + GY++ W+ Q S+ N I G+ + L P Y
Sbjct: 862 DPVPLKSIRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYT 920
Query: 569 MRVLAFSNGGDGRMSSPAITFQMGE 593
+ V + G+G +SP F E
Sbjct: 921 LNVRVVNGKGEGP-ASPDRVFNTPE 944
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 337
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 394
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 448
>gi|444706383|gb|ELW47725.1| Neurofascin [Tupaia chinensis]
Length = 1333
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 244/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L ++ W + + I N
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLSISWLKDDGPLYISN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 563 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 613
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 614 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 667
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G ++I L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 668 -VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 725
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + N +
Sbjct: 726 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNATVWGS 778
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 779 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKVRVLNSTAISL 838
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 839 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYS 896
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 897 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLQTINLEWDH--PEHPN 953
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 954 GILIGYTLK 962
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 46/313 (14%)
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GNVGIAVVRIPSEFYY 359
+ ++W +P + N+P Y + + + +FQ ++ G+V A++++ Y
Sbjct: 638 VRLTW--IPGDDNNSPITDYVVQFE---EDQFQPGVWHDHSKFPGSVNSAILQLSP---Y 689
Query: 360 TEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y+ +V A+N+VG P SE A P+ P V G + +TW P+
Sbjct: 690 VNYQFRVIAVNEVGSSHPSLPSERYRTSGAP--PESNPSDVKGEGTRKNNMEITWTPMNA 747
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNA 475
G ++Y + ET + + T +VG P Y ++V A N+
Sbjct: 748 TS------AFGPNLRYIVKWRRRETRDTWNNATVWGSRYVVGQTPVYVPYEIRVQAENDF 801
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G+GPE E + + P+ P+ V ++ +N T + + W V + + Y+ W
Sbjct: 802 GKGPEPETVIGYSGEDYPRAAPTEVKVRVLNSTAISLQWNRVYSDTVQGQLREYRAYYWR 861
Query: 536 ---------VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
V Q +A+ P G+ + L P Y + ++ + GDG S
Sbjct: 862 ESSLLKNLWVSQKRQQAS---FP-GDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPRS--- 914
Query: 587 ITFQMGEEKEFKS 599
E KEF +
Sbjct: 915 ------ETKEFTT 921
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSTRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|1842427|gb|AAB47753.1| ankyrin binding cell adhesion molecule neurofascin, partial [Rattus
norvegicus]
Length = 1166
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 248/550 (45%), Gaps = 61/550 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG +++NG+L I + ++D GIY+C ATN+ G
Sbjct: 439 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYQNGSLEIKMIRKEDQGIYTCVATNILGK 496
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 497 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 555
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 556 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 606
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 607 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 660
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 661 -VLHDHSKFPGSVNSAVLH-LSPYVNYDFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 718
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNI-YYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
S + G G + ++ I+W P+ PN+ YY + WR++ ET + + NV +
Sbjct: 719 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYYIVKWRRR-------ETRETWNNVTVWG 771
Query: 351 VR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI+
Sbjct: 772 SRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRVLNSTAIS 831
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPD 462
+ WN + + ++G+L +R YW+E + + R R ++ L P
Sbjct: 832 LQWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVGRLFPY 889
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 890 SNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHP 946
Query: 523 EEPIIGYKVR 532
+IGY +R
Sbjct: 947 NGILIGYTLR 956
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 123/570 (21%), Positives = 211/570 (37%), Gaps = 91/570 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 338 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 395
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 396 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 446
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D G LEI D G Y CV + +GK +
Sbjct: 447 PTLRWFKNG-QGSNLDGGNYHV----YQNGSLEIKMIRKEDQGIYTCVATNILGKAENQV 501
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 502 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 551
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 552 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 604
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 605 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 654
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ L ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 655 DQFQPGVLHDHSKFPGSVNSAVLHLSP---YVNYDFRVIAVNEVGSSHPSLPSERYRTSG 711
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ + G + + I W+ ET +
Sbjct: 712 AP--PESNPSDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYYIVKWRRRETRET---W 764
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V I+
Sbjct: 765 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDYPRAAPTEVKIRV 824
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+N T + + W V P + + Y+ W
Sbjct: 825 LNSTAISLQWNRVYPDTVQGQLREYRAYYW 854
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 248 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 305
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 306 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 362
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 363 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 418
Query: 182 L 182
+
Sbjct: 419 M 419
>gi|328705404|ref|XP_003242788.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
Length = 1128
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 156/591 (26%), Positives = 258/591 (43%), Gaps = 46/591 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG I C PKP W K+ NI +GGR +NG+L I +S D+GIY C AT
Sbjct: 444 EGSTTVIKCKSSGVPKPHTKWTKN-NIEITGGRYTTLDNGDLQIRGISFTDAGIYICIAT 502
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N +G + L V + P + + + +C+A + L++ +W N
Sbjct: 503 NNYGTANASVTLTVKEHTKIITE-PEDNVVVSGSMVTFQCTAIADHSLNLKIVWLAN--- 558
Query: 124 IGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
N +N P + + + IT D+G Y C+ K+ + ++S T+IV+ P
Sbjct: 559 --NEPINYYTQPRYVKNNDHSMTITKTIELDSGIYTCLAKTELDQVSANATLIVQDKPNP 616
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYT 241
P ++++ + +A ++W N I Y + T+++ TW S++V ++
Sbjct: 617 PTVLEII-CNNRNAVVKWKSMGDNRARIIRYTVEYNTSFDPGTWLVASDNVPASNLELIV 675
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
+ PW+ + F+VIA N +G PS S T D PY+ P I +
Sbjct: 676 P---------MTPWANFTFRVIAKNNVGKSNPSLHSSVCTTQPDVPYKNPENIEAYSVEP 726
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
L ISW P+P+ NAP + Y+++W++ E + KE N I + IP++
Sbjct: 727 SKLVISWTPMPKICHNAPGLRYRVYWKQNILGEVWN--FKEITNYTINKLSIPNQPIDKH 784
Query: 362 YEVKVQAINDVGP--GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT--------W 411
Y+VK+ A N+ G G + EV+ +S E++P APQ N T INVT W
Sbjct: 785 YKVKIVAFNEKGESIGLQKEVIG-YSEENVPVDAPQ-------NLTVINVTGSKSAILSW 836
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ E+++G G++I++W + + + + R I P+ K +V + A
Sbjct: 837 EPVS--PESVKGTFKGYKIQFWTDRDGKNNKIEEKVSLDRTTVEIKTFFPNAKNFVLIFA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ GP SE T P P V + + ++W+ P + GY++
Sbjct: 895 YNSRFNGPRSELISFDTPEGVP-GPVHGVETDQWGSSAILLSWQ--PPDEPNGVLTGYEI 951
Query: 532 RVWEVDQD--MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ Q RA I A + L P Y + + A + G G
Sbjct: 952 SYESMTQRGVGERAKLPSITNPKQTTAKLASLKPSTNYRIYIQATTKAGVG 1002
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 71/184 (38%), Gaps = 25/184 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYS 59
GEG I C P+P W +G + RR + N + I+ ++++D+G Y
Sbjct: 350 GEGETAVIKCEASGNPQPSIKWIHNGRPLNEASPNPRRSVTSNC-ITITSLTKNDTGNYG 408
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA------HTEELLDV 113
C ATN G + VL +L + ++C + HT+
Sbjct: 409 CNATNSIGYVYKDVYINVLALAPEIVELSQNVKTFEGSTTVIKCKSSGVPKPHTK----- 463
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
WT N + I L D G L+I SF DAG Y C+ + G + T
Sbjct: 464 ---WTKNNIEITGGRYTTL-------DNGDLQIRGISFTDAGIYICIATNNYGTANASVT 513
Query: 174 VIVE 177
+ V+
Sbjct: 514 LTVK 517
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 9/163 (5%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNV 65
V +FC +P P+ +W KDG I R I +N + +I V+ +D G Y+C +N
Sbjct: 263 VELFCIYGGSPLPQTIWLKDGRAI-QFNERIILKNYGKSFIIRKVNFEDRGKYTCEVSNG 321
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G+ ES ++ + + +P + ++C A + W HNG +
Sbjct: 322 VGLPESYNIVLDVMAVPSFTIIPQIVEGGEGETAVIKCEASGNPQPSIK--WIHNGRPLN 379
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
N P ++ + IT+ + D G Y C +++G +
Sbjct: 380 EASPN----PRRSVTSNCITITSLTKNDTGNYGCNATNSIGYV 418
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 10/162 (6%)
Query: 10 IFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNV 65
I C E P PK+ W K+G N +I + +G+L++ +D G Y C A N
Sbjct: 60 IDCEAEGEPVPKYRWMKNGKNFDWQAYDDRIAQKPGSGSLVVIKPRDEDLGQYQCFAENS 119
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G+ SK ++V + + P + I A + S H + N ++
Sbjct: 120 WGIATSKSVMVVKAELNLFSN-EPNLYIDAQEGEPFKLSCHPPTAWPKPVV---NWLKKN 175
Query: 126 NMDLNELETPNINID-GGLLEITNASFADA-GEYECVVKSTV 165
N +++ I +D G L + + DA EY C KS +
Sbjct: 176 ENGTNAVDSSRITVDPEGNLWFSYVTQHDANSEYHCYAKSLI 217
>gi|395539191|ref|XP_003771556.1| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
[Sarcophilus harrisii]
Length = 1306
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 164/602 (27%), Positives = 261/602 (43%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKK--DGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P F W K G+++ IF +NG L I +D +G Y+C N GM
Sbjct: 478 CAFFGSPIPTFKWFKGTKGSVLQENTY--IFHDNGTLEIPVAQKDSAGTYTCVVRNKLGM 535
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
++ L + P+ + P + + C + L W + + N
Sbjct: 536 AKNDVHLEI-KDPTRIIKHPEYKVVQRGGKVSFECKVKHDPTLIATLTWLKDNGELPN-- 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+ID L I N S D Y CV +++ +S + V P
Sbjct: 593 -----DGRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVSASAVLRVVAPSPTPAPVYD 647
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + + S + W G N PIT + I + + W + S+ V G +
Sbjct: 648 RPNPPFDLELTSLLERSVQLSWIPGDENNSPITDFIIEYEDSLHEPGIWHHHSD-VPGTQ 706
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ E L P+ Y F+VIA N +G PS S Y T A +P + P+ + G
Sbjct: 707 ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTKAAEPEENPTAVEG 757
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 758 IGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 814
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y VKVQA+NDVG PE ++ S ED+P VAP V NST V W P+
Sbjct: 815 TF--VPYLVKVQALNDVGFAPEPVIIIGHSGEDLPMVAPSNVHVNVVNSTLAEVHWEPVP 872
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
++IRG L G+RI YWK N + ++ + + ++ GL+P + Y + V
Sbjct: 873 --PKSIRGHLKGYRIYYWKVKNSSKRNKRHVEKKILTFNGNKTHGMLPGLEPFSHYMLNV 930
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S ++R + P + + +K +NPT +T + PS + Y
Sbjct: 931 RVVNGKGEGPAS---VDRVFNTPEGVPSAPLFLKIVNPTLDSLTLEWDPPSHPNGILTAY 987
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +LS RY A ++ G G +++ A
Sbjct: 988 TLKFQPINSTHELGPLVDIKIP-ANMTSLILRNLSYNTRYKFYFYAQTSAGSGSQITEEA 1046
Query: 587 IT 588
+T
Sbjct: 1047 VT 1048
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 140/614 (22%), Positives = 237/614 (38%), Gaps = 81/614 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKPK W +G + RKI + +L S V S +Y
Sbjct: 377 GEDG--TLICRANGNPKPKISWLTNGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 433
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A NL + +LD A+ +
Sbjct: 434 CNASNEYGYLLANAFVNVL-------AEPPRILTDA--NLHYQVITDRPAMLDCAFFGSP 484
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + N I D G LEI A AG Y CVV++ +G
Sbjct: 485 IPTFKWFKGTKGSVLQENTY----IFHDNGTLEIPVAQKDSAGTYTCVVRNKLGMAKNDV 540
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY-KIIARTNW--------NS 223
+ ++ P ++++ H +Q + + H +IA W N
Sbjct: 541 HLEIKDP------TRIIK-HPEYKVVQRGGKVSFECKVKHDPTLIATLTWLKDNGELPND 593
Query: 224 TWFNV-SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SP 276
F++ ++H+ I E D YT S++ V ++ +V+A PS +P
Sbjct: 594 GRFSIDNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAVLRVVA--------PSPTP 642
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
+P Y+ P P + + +SW +P ++ N+P + I + D+ +
Sbjct: 643 APVYDRP-----NPPFDLELTSLLERSVQLSW--IPGDENNSPITDFIIEYE---DSLHE 692
Query: 337 SETLKEYGNV-GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDM-PQVAP 394
+ +V G Y +Y +V A+N +G SEV + + P+ P
Sbjct: 693 PGIWHHHSDVPGTQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEVSEYYMTKAAEPEENP 752
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
V G + +TW P++ N G + +++ + ++D +E ++ ++
Sbjct: 753 TAVEGIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--Y 808
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++ G Y VKV A N+ G PE + + P PS VH+ +N T V W
Sbjct: 809 IVSGTPTFVPYLVKVQALNDVGFAPEPVIIIGHSGEDLPMVAPSNVHVNVVNSTLAEVHW 868
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+V R + GN + L P Y +
Sbjct: 869 EPVPPKSIRGHLKGYRIYYWKVKNSSKRNKRHVEKKILTFNGNKTHGMLPGLEPFSHYML 928
Query: 570 RVLAFSNGGDGRMS 583
V + G+G S
Sbjct: 929 NVRVVNGKGEGPAS 942
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 210/555 (37%), Gaps = 73/555 (13%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + F L I+ VS DSG Y CTA N
Sbjct: 290 LSLECIAEGLPTPSITWTKEDGELPINRTSYTNFRK-TLNINLVSEADSGKYKCTARNPL 348
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ ++ W NGV I
Sbjct: 349 GFVEHTISVTVKAAP-YWITAPKNLVLSPGEDGTLICRANGNPKPKIS--WLTNGVPIEM 405
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 406 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 459
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
+H T + D A G PI +K WF ++ + +E + Y
Sbjct: 460 TDANLHYQVITDRPAMLDCAFFGSPIPTFK----------WFKGTKGSVLQE-NTYIFHD 508
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P ++ GGK
Sbjct: 509 NGTLEIPVAQKDSAGTYTCVVRNKLGMAK-NDVHLEIKDPTRIIKHPEYKVVQRGGK--- 564
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
+S+E + ++ P + + W K N E ++ N + ++ I E T
Sbjct: 565 --VSFE---CKVKHDPTLIATLTWLKDNG-ELPNDGRFSIDNDHLVIMNISDEDDATYTC 618
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR----------GFNSTAINVTWNP 413
V +++ V VV P P V+ R ++ ++W P
Sbjct: 619 VANTSLDIVSASAVLRVVA-------PSPTPAPVYDRPNPPFDLELTSLLERSVQLSWIP 671
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYL------SRTTRNWALIVGLQPDTKYYV 467
+ I +I + ED+ E +++ ++TT + L P KY
Sbjct: 672 GDENNSPITDFIIEY------EDSLHEPGIWHHHSDVPGTQTTAE----LKLSPYVKYSF 721
Query: 468 KVMAYNNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
+V+A N+ G SE Y+ T P++ P+AV G P + +TW+ +
Sbjct: 722 RVIAVNSIGRSLPSEVSEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNG 779
Query: 525 PIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 780 PGLQYKVSWRQKDGD 794
>gi|345797906|ref|XP_545682.3| PREDICTED: neurofascin isoform 1 [Canis lupus familiaris]
Length = 1189
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 245/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 630
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G ++I L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + N +
Sbjct: 743 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R R ++ L P +
Sbjct: 856 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 971 GILIGYTLK 979
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 136/644 (21%), Positives = 234/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V A++++ Y Y+ +V AIN+VG P SE
Sbjct: 679 DQFQPGVWHDHSKFPGSVNSAILQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 788 NNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+
Sbjct: 848 LNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRPR 903
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 904 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GTDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|355782631|gb|EHH64552.1| hypothetical protein EGM_17797 [Macaca fascicularis]
Length = 1345
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 245/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 960 GIMTGYTLK 968
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 138/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRV 836
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+ L
Sbjct: 837 MNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLR 892
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 893 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|355558859|gb|EHH15639.1| hypothetical protein EGK_01754 [Macaca mulatta]
Length = 1345
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 245/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 960 GIMTGYTLK 968
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 138/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRV 836
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+ L
Sbjct: 837 MNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLR 892
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 893 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|402857487|ref|XP_003893285.1| PREDICTED: neurofascin [Papio anubis]
Length = 1446
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 245/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 554 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 611
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 612 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 670
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 671 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 721
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 722 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 775
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 776 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 833
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 834 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 886
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 887 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 946
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 947 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 1004
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 1005 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 1061
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 1062 GIMTGYTLK 1070
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 138/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 453 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 510
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 511 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 561
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 562 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 616
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 617 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 666
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 667 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 719
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 720 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQF---EE 769
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V A+N+VG P SE
Sbjct: 770 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 826
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 827 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 878
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V ++
Sbjct: 879 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRV 938
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+ L
Sbjct: 939 MNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLR 994
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 995 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 1029
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 363 GMDLLLECIASGXPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 421 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 477
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 478 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 533
Query: 182 L 182
+
Sbjct: 534 M 534
>gi|47221108|emb|CAG12802.1| unnamed protein product [Tetraodon nigroviridis]
Length = 793
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 205/448 (45%), Gaps = 27/448 (6%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
+ N L I SR D G Y C A N G E L V E P ++ + +
Sbjct: 363 LLRNNTLRIVNSSRADEGSYVCRADNQFGSAEMTAVLWV-KDAMRVELSPHRVEVTVGES 421
Query: 99 LQLRCSAHTEELLDVAYIWTHNGVRI------GNMD----LNELETPNINIDGGLLEITN 148
+ L C A + LDV + W N I G+ + + E+ ++ L I N
Sbjct: 422 VVLSCKATHDSSLDVTFQWFFNQRPITFQQDGGHFEYIQTVRSKESSTVD-----LMIRN 476
Query: 149 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGR 208
AG Y C +++ + + ++V GPPG PG V V E+ T+AT+ WT G N
Sbjct: 477 ILLKHAGRYGCRAQTSADTVIAEAELLVRGPPGPPGVVIVEEITDTTATLSWTRGLDNHS 536
Query: 209 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 268
PI+ Y + AR+ ++ W + + D TG E+++ L PW YEF+V+A N +
Sbjct: 537 PISTYNLQARSPFSLGW-----QTVKTDPDPVTGDLESAMAVRLNPWVEYEFRVVATNAI 591
Query: 269 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 328
G G+PS PS T P AP+ + GG G+ +L I WEP+ E QN Y + +R
Sbjct: 592 GTGDPSVPSRGVRTKEAVPSVAPANVSGGNGRRHELVILWEPVSEEFQNGEGFGYIVAFR 651
Query: 329 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
N T E + + + R + T +EVKV N+ G GP S+VV I SAE
Sbjct: 652 -ANGTRGWKEKMVTSADSTMYKYRDETFPPLTPFEVKVGVYNNRGDGPFSKVVIIHSAEG 710
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
P+ AP V + +++ I +TW P GR G+ + YWK+ +E +
Sbjct: 711 EPKEAPSDVKAYSISASEIRLTWKP-----SPGPGRPKGYEVCYWKDMEQQEAGKKQRTV 765
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAG 476
++ GL+ +T Y V +N+ G
Sbjct: 766 KNETTTILTGLEGNTLYQFTVKGFNSVG 793
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 148/618 (23%), Positives = 226/618 (36%), Gaps = 100/618 (16%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P W+K +GNI RK L I + +DSG Y C
Sbjct: 235 AARGATVRLECFALGNPVPTITWRKINGNIPKKARLRK--SQAVLEIPNIQLEDSGTYEC 292
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL----LDVAYI 116
A N G KG L V + I++ + L + T+ + + +
Sbjct: 293 KAENPRGGTAFKGHLQVYSESEHALIYSCFISLCHNGVCSLLAFSGTKFIGASQVSIPRS 352
Query: 117 WT-HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
WT V I + + L I N+S AD G Y C + G +
Sbjct: 353 WTVLQSVWI------------LLLRNNTLRIVNSSRADEGSYVCRADNQFGSAEMTAVLW 400
Query: 176 VEGPPGLPGGVQVVEV-------------HKTS--ATIQWTDGATNGRPIT------HYK 214
V+ + VEV H +S T QW N RPIT H++
Sbjct: 401 VKDAMRVELSPHRVEVTVGESVVLSCKATHDSSLDVTFQW---FFNQRPITFQQDGGHFE 457
Query: 215 II--ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
I R+ +ST + +++ K RY R + S + V IA EL
Sbjct: 458 YIQTVRSKESSTVDLMIRNILLKHAGRYGCRAQTSADTV-----------IAEAELLVRG 506
Query: 273 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-KN 331
P P P ++ + + G IS L + +P + + W+ K
Sbjct: 507 P--PGPPGVVIVEEITDTTATLSWTRGLDNHSPISTYNL---QARSP---FSLGWQTVKT 558
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMP 390
D + + L+ +AV P + EYE +V A N +G G P + + E +P
Sbjct: 559 DPDPVTGDLES----AMAVRLNP----WVEYEFRVVATNAIGTGDPSVPSRGVRTKEAVP 610
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-------WKED---NPEE 440
VAP V + + W P+ +N G G+ + + WKE + +
Sbjct: 611 SVAPANVSGGNGRRHELVILWEPVSEEFQN--GEGFGYIVAFRANGTRGWKEKMVTSADS 668
Query: 441 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV 500
T Y T P T + VKV YNN G+GP S+ + + P++ PS V
Sbjct: 669 TMYKYRDET---------FPPLTPFEVKVGVYNNRGDGPFSKVVIIHSAEGEPKEAPSDV 719
Query: 501 HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD 560
I+ + + +TW+ PS GY+V W+ D + A V N +
Sbjct: 720 KAYSISASEIRLTWK---PSPGPGRPKGYEVCYWK-DMEQQEAGKKQRTVKNETTTILTG 775
Query: 561 LSPGKRYHMRVLAFSNGG 578
L Y V F++ G
Sbjct: 776 LEGNTLYQFTVKGFNSVG 793
>gi|351711148|gb|EHB14067.1| Neurofascin [Heterocephalus glaber]
Length = 1343
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 241/549 (43%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 510
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 511 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLRLTVTWLKDDEPLYIGN 569
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 570 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLDDQATPTNR 620
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 621 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGEDNNSPITEYVV----QFEEDQFQPG-- 674
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 675 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 732
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ E + + NV +
Sbjct: 733 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------EARETWNNVTVWGS 785
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE V +S ED P+ AP V R NSTAI +
Sbjct: 786 RYVVGQTPVYVPYEIRVQAENDFGKGPEPNTVIGYSGEDYPRAAPTDVKVRVMNSTAIGL 845
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
WN + + ++G+L +R YW+E + ++ R + R ++ L P +
Sbjct: 846 QWN--RVYSDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQASFPSDRTRGVVGHLFPYS 903
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P + PT VT + P
Sbjct: 904 NYRLEMVVVNGRGDGPRSETKEFTTPEGVPSAP---RRFRVRQPTLETVTLEWDHPEHPN 960
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 961 GILTGYTLK 969
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 139/647 (21%), Positives = 232/647 (35%), Gaps = 120/647 (18%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 352 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQVSSRAVYQC 409
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 410 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 460
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 461 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 515
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K TW E +
Sbjct: 516 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLRLTVTWLKDDEPL 565
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 566 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLDDQATPT 618
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P E N+P Y + + +
Sbjct: 619 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGEDNNSPITEYVVQFE---E 668
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 669 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 725
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETA 442
A P+ P V G + +TW P+ G ++Y W+ ET
Sbjct: 726 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRREARET- 776
Query: 443 VYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 501
+ + T +VG P Y ++V A N+ G+GPE + + P+ P+ V
Sbjct: 777 --WNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPNTVIGYSGEDYPRAAPTDVK 834
Query: 502 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGN 552
++ +N T + + W V + + Y+ W V Q +A+ P
Sbjct: 835 VRVMNSTAIGLQWNRVYSDTVQGQLREYRAYYWRESSLLKSLWVSQKRQQAS---FPSDR 891
Query: 553 TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
T + L P Y + ++ + GDG S E KEF +
Sbjct: 892 TRGV-VGHLFPYSNYRLEMVVVNGRGDGPRS---------ETKEFTT 928
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 262 GMDLLLECIASGVPTPGIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 319
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 320 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 376
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 377 PLQSAPPN----PNREVAGDTIIFRDTQVSSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 432
Query: 182 L 182
+
Sbjct: 433 M 433
>gi|410920619|ref|XP_003973781.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Takifugu rubripes]
Length = 1151
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 157/601 (26%), Positives = 261/601 (43%), Gaps = 40/601 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG V + C ++P W KD G R + +NG L I ++DSG Y+C
Sbjct: 436 AVEGKGVMMHCKVFSSPPSAITWSKDDTSDSVEGPRFSVHDNGTLEIYSAEKEDSGPYTC 495
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 118
A N G + ++ + P+ + P + I Q C A ++ D +W
Sbjct: 496 FAKNTEG-SSAINVMLSVKDPTRIMEPPEDLRILKGTTAQFSCLAEYDKSFSDDFEILWE 554
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ I N E I+ G+L+I N S D G Y C+ ++ + ++V
Sbjct: 555 KDDKEIA---FNYTENSRYFIEDGILQIVNVSHRDQGVYTCLARTPMDGDKAAALLLVLD 611
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWFNVSEHVIGKE 236
P P + + E S ++W G + T + I + W W KE
Sbjct: 612 VPDAPQYLVLSEHKSQSVKLKWIPGDDHNSSTTEFIIQYEESQWEPGNW---------KE 662
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R G ++I L Y F+V N +G G PS P+ +Y TP P + P I
Sbjct: 663 LLRVPGNHNSAILK-LHGHVDYCFRVSGVNAVGRGPPSQPTERYRTPPAAPDKNPENIKI 721
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
+++I+WEPL + N P + YK+ +R+++ + ++Q +K + V V P+
Sbjct: 722 ESHMPQEMNINWEPLLPIEHNGPGLEYKVSYRRQDVEEDWQEHIVKRHSFV---VKNTPT 778
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ YE+K+QA N G GPE + T +S ED P AP V NS+ + V+W +
Sbjct: 779 ---FVPYEIKIQARNHQGWGPEPRIKTGYSGEDFPSAAPDDVAVEVINSSVVKVSW--MR 833
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKV 469
+ ++ + G L G+RI +W+ + ++ + ++ T RN AL+ L P ++Y + V
Sbjct: 834 VHKDKLHGHLGGYRISWWRLRSLVDSKKNHGNKETLTFPGDRNHALVPELTPFSEYSLIV 893
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
M +N G GP S +T P++ P A I + TV V W +P E I+
Sbjct: 894 MTFNGRGNGPGSHPVNFKTPEGVPERNP-AFRITDVQRHTVSVAW---APPLEPNGILTG 949
Query: 530 KVRVWEVDQDMSRANDTIIPVGN--TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ +++ D + + N T DL P +Y + + + G G + S
Sbjct: 950 YLLEYQLINDTEAGPVQTVDISNPSTTKWIFRDLEPVSKYQFDLRSCTTVGCGAIVSVEC 1009
Query: 588 T 588
T
Sbjct: 1010 T 1010
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTA 62
+G + + C P P+ W K G + + + K+ +G LLI P V ++D G Y C A
Sbjct: 256 KGEELILECIAAGFPTPQVEWVKMGQHLPT--KAKMESHGKLLIVPDVEQEDGGKYMCKA 313
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G +IV P + + ++++ ++ ++CSA A W NG
Sbjct: 314 KNTVGEAVHYFTVIVEEPPEWVSEPESQLSMIG-SDVLIKCSASGTP--QPAVTWRVNGA 370
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
L + +PN + G + + N +D+ Y+C + G + + +++ P +
Sbjct: 371 -----PLQDSPSPNRRVLGDTIVLHNTKASDSAVYQCEASNRHGTLLSNANIMIMNLPPM 425
>gi|449481128|ref|XP_002195594.2| PREDICTED: neuronal cell adhesion molecule [Taeniopygia guttata]
Length = 1284
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 245/547 (44%), Gaps = 50/547 (9%)
Query: 12 CNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +PKP+ W K G+I+ G +NG L I ++ +G Y+C A N G
Sbjct: 452 CAYFGSPKPEIEWFKGVKGSIL-RGNEYVFHDNGTLEIPVAQKNSAGTYTCVARNELGKI 510
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
+++ +L + P+ + P I + + C + L W N N +L
Sbjct: 511 QNEVQLEI-KDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVTWLKN-----NDEL 564
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVEGP 179
+ E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 565 PDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIYAR 622
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEV 237
P P +++ + S + W G N PI ++ I + W +E V G +
Sbjct: 623 PNPPFDLELTGQLERSIDLSWIPGDENNSPIINFVIEYEDALHEPGVWHYQTE-VPGTQ- 680
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ + L P+ Y F+VIA N++G +PS PS QY T + P + P+ + G
Sbjct: 681 --------TTAQLKLSPYVNYSFRVIAVNKIGRSQPSEPSEQYLTKSASPDENPANVQGI 732
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + +L I+WEPL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 733 GSEPDNLVITWEPLKGFQSNGPGLQYKVSWRQKDVDDEWTSVIV---ANVSKYIVSGTPT 789
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
F YEVKVQA+ND+G PE V S ED+P VAP V NST V W+P+ L
Sbjct: 790 F--VPYEVKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPVPL 847
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVKVM 470
+ +RG L G+++ YWK + + ++ R + + ++ GL+P + Y + V
Sbjct: 848 --KTVRGHLQGYKVYYWKVQSLSRRSRRHIEKKILTFRGNKTFGMLPGLEPYSSYKLNVR 905
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N GEGP S + T P P +K NPT +T + SP+ + Y
Sbjct: 906 VVNGKGEGPASPDKVFNTPEGVPSSP---SFLKITNPTLDSLTLEWGSPTHPNGVLTSYT 962
Query: 531 VRVWEVD 537
++ ++
Sbjct: 963 LKFQPIN 969
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 147/629 (23%), Positives = 245/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 351 GEDG--TLICRANGNPKPSISWLANGVPIAIAPEDPSRKV-DGDTIIFSQVQERSSAVYQ 407
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A++ Q+ A + LLD AY +
Sbjct: 408 CNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IADSPALLDCAYFGSP 458
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE + D G LEI A AG Y CV ++ +GKI +
Sbjct: 459 KPEIEWFKGVKGSILRGNEY----VFHDNGTLEIPVAQKNSAGTYTCVARNELGKIQNEV 514
Query: 173 TVIVEGPPGLPG-------------GVQVVEVHKTS--ATIQWTDGATNGRPITHYKIIA 217
+ ++ P + + + H ++ T+ W + P ++
Sbjct: 515 QLEIKDPTMIIKQPEYKVIQRYGQVSFECIIKHDSTLLPTVTWLKN-NDELPDDERFLVG 573
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 574 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---- 333
Y P P + G + +SW +P ++ N+P I + I +
Sbjct: 618 IIYARP-----NPPFDLELTGQLERSIDLSW--IPGDENNSPIINFVIEYEDALHEPGVW 670
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E G A +++ Y Y +V A+N +G P SE SA P
Sbjct: 671 HYQTEVP---GTQTTAQLKLSP---YVNYSFRVIAVNKIGRSQPSEPSEQYLTKSAS--P 722
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW P++ + N G + +++ + ++D +E ++ +
Sbjct: 723 DENPANVQGIGSEPDNLVITWEPLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVIVANVS 780
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y VKV A N+ G PE + + P P V + IN T
Sbjct: 781 K--YIVSGTPTFVPYEVKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 838
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + I GN + L P
Sbjct: 839 KVHWDPVPLKTVRGHLQGYKVYYWKV-QSLSRRSRRHIEKKILTFRGNKTFGMLPGLEPY 897
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F E
Sbjct: 898 SSYKLNVRVVNGKGEGP-ASPDKVFNTPE 925
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 127/561 (22%), Positives = 208/561 (37%), Gaps = 80/561 (14%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y C A
Sbjct: 261 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCIA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 319 RNTLGSVHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLANGV 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 376 PIAIAP----EDPSRKVDGDTIIFSQVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 431
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 432 ILTPANKLYQVIADSPAL--LDCAYFGSPKPEIE----------WFKGVKGSILRG-NEY 478
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNTPADKPYQAPSR 293
++E V S + +A NELG E P+ P Y+ R
Sbjct: 479 VFHDNGTLEIPVAQKNSAGTYTCVARNELGKIQNEVQLEIKDPTMIIKQPE---YKVIQR 535
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G +S+E + + + + W K ND E + G + ++ +
Sbjct: 536 YG---------QVSFECIIKHDS---TLLPTVTWLKNND-ELPDDERFLVGKDNLTIMNV 582
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 583 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPFDLELTGQLERSI 639
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL------SRTTRNWALIVGLQP 461
+++W P + EN +I I+Y ED E V++ ++TT + L P
Sbjct: 640 DLSWIPGD---EN-NSPIINFVIEY--EDALHEPGVWHYQTEVPGTQTTAQ----LKLSP 689
Query: 462 DTKYYVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y +V+A N G SE+YL ++ +P + P+ V G P + +TW +
Sbjct: 690 YVNYSFRVIAVNKIGRSQPSEPSEQYLTKS--ASPDENPANVQGIGSEPDNLVITWEPLK 747
Query: 519 PSFEEEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 748 GFQSNGPGLQYKVSWRQKDVD 768
>gi|47229254|emb|CAG04006.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1238
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 240/517 (46%), Gaps = 61/517 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG + C +P P+ W K G G R + NG L I + D G Y C +
Sbjct: 446 EGSRAFLDCRYFGSPVPELRWSKYGQGSLEGNRFRTHSNGTLEIKNIQVVDQGAYLCVVS 505
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G DE++ R I + P+ P + + +++ C+ T+ V W G +
Sbjct: 506 NVAGRDENQVR-IEVKEPTLIVTRPTDMKVIRGADVRFECAVKTDATTPVTTTWM-KGTK 563
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ I++D L I+N + AD G Y C+VKS + + S ++V P P
Sbjct: 564 PVTLGWR------ISMDESNLVISNINTADGGNYTCLVKSELEQKSASARLMVMDRPDPP 617
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART------NWNSTW-FNVSEHVIG-- 234
+++ + H+ S + W G ++ PIT + ++ ++ T+ V+++++
Sbjct: 618 TDLELSDPHERSVRLSWVPGNSHHNPITGERCPGKSVSSIFPTFSITYTCAVADNLVQYD 677
Query: 235 ---------KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
K + Y G + I + L+P++ YEF+VIA NE+G PS PS ++ +
Sbjct: 678 DDDWLPGKWKNLSLYPGNLNSVILH-LLPFTYYEFRVIAINEIGMSRPSRPSSRFQSSGA 736
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
P P + G G ++ ISWEPL + N P++ Y ++W++K+ E E+ N
Sbjct: 737 PPDVIPKNLKGVGTWRNNMEISWEPLAYKDWNGPHLKYLVWWKRKDSRE-------EWKN 789
Query: 346 VGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDM-------PQV 392
A R S++Y +T Y++KVQA+ND G GPES +VT FS ED+ P
Sbjct: 790 ---ATTRW-SKYYIYGADTFTPYDLKVQAVNDFGMGPESPIVTGFSGEDLSDAFSPGPLT 845
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--------NPEETAVY 444
AP + S + V W+P+ ++I G L +++ YW++ N +
Sbjct: 846 APLNLRVSDIESNQVTVHWDPVS--HDSIMGELKEYKVYYWRDSSQLRWLRVNRALKSQA 903
Query: 445 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
+ +R ++ GL P + Y + ++ NN EGP S
Sbjct: 904 FANRNGEPSGVVTGLHPYSNYKMYIVVVNNRFEGPSS 940
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNVHG 67
+ C + AP+P W +G I + E +++ V+ ++ +Y C A+N +G
Sbjct: 358 LVCRSDGAPRPTVTWFINGEPIDPSTLQPNVEVSGETVVLRTVTTLNNAVYQCNASNPYG 417
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WTH 119
+ + VLH P+I RN L+ + LD Y W+
Sbjct: 418 YLLANAFVNVLHA-------TPRIL--GSRNEYLKVIEGSRAFLDCRYFGSPVPELRWSK 468
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G G+++ N T + G LEI N D G Y CVV + G+ + + V+ P
Sbjct: 469 YGQ--GSLEGNRFRTHS----NGTLEIKNIQVVDQGAYLCVVSNVAGRDENQVRIEVKEP 522
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 11/177 (6%)
Query: 12 CNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C P P W+KDG ++ S + K F N + I S +D+G Y CTATN
Sbjct: 269 CIAAGVPTPHITWRKDGEDLVVRSPVKAKNF-NKMIQIPRASFEDAGEYVCTATNKLDYI 327
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
+ + V P + E+ P + +A + +L C + V W NG I L
Sbjct: 328 QHTITVQVKAAPFWLEK-PADLVLAPEEDGRLVCRSDGAPRPTVT--WFINGEPIDPSTL 384
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG 185
PN+ + G + + + + Y+C + G + V ++ P + G
Sbjct: 385 Q----PNVEVSGETVVLRTVTTLNNAVYQCNASNPYGYLLANAFVNVLHATPRILGS 437
>gi|47058952|ref|NP_037282.1| neuronal cell adhesion molecule precursor [Rattus norvegicus]
gi|46369979|gb|AAS89825.1| neuronal cell adhesion molecule long isoform Nc17 [Rattus norvegicus]
Length = 1299
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVL-------AEPPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 536 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 588
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 589 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 639 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 691
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 692 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 746
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 747 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 802
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 803 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 862
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 863 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 921
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 922 NVRVVNGKGEGPASA 936
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|20455467|sp|Q05695.3|L1CAM_RAT RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: Full=Nerve-growth
factor-inducible large external glycoprotein; Short=NILE;
AltName: CD_antigen=CD171; Flags: Precursor
Length = 1259
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 154/593 (25%), Positives = 269/593 (45%), Gaps = 42/593 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG+L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 497 QAANDQNNVTILANLQVKEATQITQG--PRSTIEKKGARVTFTCQASFDPSLQASITWRG 554
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL E ++ I+ G L I + ++D G+Y CV + + ++ ++ ++V G
Sbjct: 555 DG-----RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVG 609
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVI 233
PG +++ + H ++ + W+ + PI Y I + WF++ + V
Sbjct: 610 SPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VP 668
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + S L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 669 GNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVD 719
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ G G + ++ I+W+PL NAP I Y++ WR + ET KE V + +
Sbjct: 720 VRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQETWKEQ-TVSDPFLVV 774
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 775 SNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A+N G GP SE + T P P A+H++ + T++ + W+ P +
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLT 948
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D + + ++ +L+P +Y ++ A ++ G G
Sbjct: 949 GYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTHQGPG 1001
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 234/599 (39%), Gaps = 54/599 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G I + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRST-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L ++ +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYN 848
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G ++ + C E P P W + + + R I++N N L + V +D G Y+
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPMPTD--RVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ Q P +L C +V W
Sbjct: 311 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVT--WRI 367
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ I ++ ++ I+ G L ++N +D +C ++ G + + V
Sbjct: 368 NGMSIEKVNKDQ----KYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV 420
>gi|149051179|gb|EDM03352.1| rCG62174, isoform CRA_a [Rattus norvegicus]
Length = 1205
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 587 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 639
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 640 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 693
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 694 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 749
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 750 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 806
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 807 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 864
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 865 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 922
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 923 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 979
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 980 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1038
Query: 587 IT 588
IT
Sbjct: 1039 IT 1040
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 369 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 427
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 428 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 478
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 479 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 534
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 535 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 587
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 588 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 637
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 638 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 690
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 691 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 745
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 746 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 801
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 802 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 861
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 862 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 920
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 921 NVRVVNGKGEGPASA 935
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 338 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 395 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 447
>gi|46369973|gb|AAS89822.1| neuronal cell adhesion molecule long isoform Nc3 [Rattus norvegicus]
Length = 1198
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 536 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 588
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 589 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 639 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 691
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 692 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 746
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 747 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 802
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 803 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 862
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 863 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 921
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 922 NVRVVNGKGEGPASA 936
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|296236723|ref|XP_002807966.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
[Callithrix jacchus]
Length = 1248
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L++ ++G L G+ + YW+E + + + + R ++ GL+P
Sbjct: 830 LVKWRPVDLVQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHVECQSNTSLRLHWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYRPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 135/605 (22%), Positives = 230/605 (38%), Gaps = 58/605 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + G L+++ D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEITWRINGIPVEELAMDPNYRIQRGALILNNXQTSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N +G L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EAGNRNG-------LLLANAYIYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ ++ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLQIKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P A S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLVVGSPGSVPRLALS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ K + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--KQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N G+GPE + + + PQ P I+ +N + V V WR V + + GY
Sbjct: 789 QAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITF 589
PA F
Sbjct: 905 PASEF 909
>gi|46369975|gb|AAS89823.1| neuronal cell adhesion molecule long isoform Nc6 [Rattus norvegicus]
Length = 1206
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 536 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 588
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 589 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 639 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 691
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 692 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 746
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 747 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 802
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 803 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 862
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 863 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 921
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 922 NVRVVNGKGEGPASA 936
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|46369971|gb|AAS89821.1| neuronal cell adhesion molecule long isoform Nc14 [Rattus norvegicus]
Length = 1197
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 127/614 (20%), Positives = 228/614 (37%), Gaps = 81/614 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWF 226
++ P + V + S + + + +I W N F
Sbjct: 536 EIKDPTRFIKQPEYAVVQRGSKV------SFECKVKHDHTLIPTILWLKDNGELPNDERF 589
Query: 227 NVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 280
+V +H++ +V YT ++++V ++ +V+A +P+P Y
Sbjct: 590 SVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPIY 639
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSET 339
+ P P + + ++W P + N+P + I + ++
Sbjct: 640 DVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRHQ 692
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG 396
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 693 AEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPTA 747
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V G + +TW P+ + N G + +++ + ++D +E ++ ++ ++
Sbjct: 748 VEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIV 803
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 804 SGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDP 863
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMR 570
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 864 VPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLN 922
Query: 571 VLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 923 VRVVNGKGEGPASA 936
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|380810882|gb|AFE77316.1| neurofascin isoform 2 precursor [Macaca mulatta]
Length = 1189
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 463 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 520
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 521 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 579
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVE------- 177
E ++ L I + D G Y CV + + + K TV+ +
Sbjct: 580 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 630
Query: 178 ------GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 631 LAALPIGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 684
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 685 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 742
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 743 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 795
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 796 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 855
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 856 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 913
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 914 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 970
Query: 524 EPIIGYKVR 532
+ GY ++
Sbjct: 971 GIMTGYTLK 979
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 138/644 (21%), Positives = 235/644 (36%), Gaps = 114/644 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 362 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 419
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 420 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 470
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 471 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 525
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 526 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 575
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 576 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 628
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 629 ---NRLAALPIGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V A+N+VG P SE
Sbjct: 679 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 735
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 736 AP--PESNPGDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAW 787
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P+ P+ V ++
Sbjct: 788 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRV 847
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLD 555
+N T + + W V P + + Y+ W V Q +A+ P G+ L
Sbjct: 848 MNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDRLR 903
Query: 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
+ L P Y + ++ + GDG S E KEF +
Sbjct: 904 GVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 938
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 272 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 329
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 330 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 386
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 387 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 442
Query: 182 L 182
+
Sbjct: 443 M 443
>gi|46369977|gb|AAS89824.1| neuronal cell adhesion molecule long isoform Nc7 [Rattus norvegicus]
Length = 1194
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 536 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 588
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 589 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 639 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 691
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 692 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 746
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 747 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 802
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 803 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 862
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 863 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 921
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 922 NVRVVNGKGEGPASA 936
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|165993291|emb|CAP71957.1| nadl1.2 [Danio rerio]
Length = 1145
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 159/589 (26%), Positives = 267/589 (45%), Gaps = 38/589 (6%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
EG + C +P+P W+ + + + R +G+L IS S +DSG Y+CT
Sbjct: 453 AEGQTTELACETFGSPRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCT 512
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHN 120
N L VL+ + + P + I + L C + D+ + W N
Sbjct: 513 VNN--SKITITAELDVLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKN 569
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ ++ ID L I D G Y C V +T+ ++ + P
Sbjct: 570 TQKLTESS----DSDKYMIDESTLIIPEVEEEDEGTYTCEVITTLDMAKASGSITIVDRP 625
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +Q+ E + T+ WT GA + P+ Y I + T + E +E+ R
Sbjct: 626 DPPSLIQMTEPKERRVTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRV 678
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+G + + L P+ +Y F+VIA NE+G +PS + Y+TPA P P + +
Sbjct: 679 SGSSQRATLP-LKPFISYHFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDE 737
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G L I+W+ + R N P+ +YK+ WRK + T K+ + V + + ++
Sbjct: 738 PGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FS 793
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+++KVQA+N++G GPE + + +S ED P AP V NSTAI VTW + RE
Sbjct: 794 AFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAAVN--RET 851
Query: 421 IRGRLIGHRIKYWKEDNP-------EETAVYYLSRTTRNWALIVG-LQPDTKYYVKVMAY 472
+RGRL G++I Y P E + ++ + ++G LQP + Y + V +
Sbjct: 852 VRGRLQGYKI-YLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDLQPFSHYNLAVSVF 910
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N GEGP+SE L T P PPS++ + +P+ +T + P+ +IGY ++
Sbjct: 911 NYKGEGPQSESILFFTPEGVP-GPPSSLMLD--SPSETEMTVHWTPPNQPNGNLIGYILQ 967
Query: 533 VWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++D D S ++ + + T + L P RY + ++ G+G
Sbjct: 968 HQQLDNDASLMQ--VVKISDPTASHYKLKLDPHSRYRFYLRGYTAIGEG 1014
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 141/621 (22%), Positives = 251/621 (40%), Gaps = 92/621 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G V + C + PKP+ W +G ++ R+ ++G L + V D+ ++ C A
Sbjct: 361 GETVKLECKADGIPKPEVTWSINGILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
+ HG ++++ Y +LPP+I ++A + +L C +V
Sbjct: 421 ASKHGS-------VLINAYVYVIELPPQILTEDGLMYSVAEGQTTELACETFGSPRPNVT 473
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK--- 171
+ G + N + I + G L+I+NAS D+G+Y C V ++ I+ +
Sbjct: 474 WEGESWGALVANQRM-------IQLSDGSLQISNASLNDSGQYTCTVNNSKITITAELDV 526
Query: 172 --TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT---HYKIIARTNWNSTWF 226
TVIV+ P L IQ G+P T Y++ +R + +
Sbjct: 527 LNKTVIVKPPLAL--------------RIQ------RGKPATLTCEYQVDSRQDLPQVQW 566
Query: 227 --NVSEHVIGKEVDRYTGRKEASIENVLVPW------STYEFKVIAGNELGYGEPSSPSP 278
N + + D+Y + +++P TY +VI ++ S
Sbjct: 567 RKNTQKLTESSDSDKYMIDEST----LIIPEVEEEDEGTYTCEVITTLDMAKASGSI--- 619
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQS 337
T D+P PS I K +++SW P N+P + Y I F +D +
Sbjct: 620 ---TIVDRP-DPPSLIQMTEPKERRVTLSW--TPGADHNSPVLEYLIEFEETGSDRKEWE 673
Query: 338 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA-PQG 396
E + G+ A + + + Y +V AIN++G S V +S P + P+G
Sbjct: 674 ELSRVSGSSQRATLPLKP---FISYHFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEG 730
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V S + +TW E+ R + G +++ + K + ++ T ++
Sbjct: 731 VRSDSDEPGTLVITWK--EMDRRSFNGPDFHYKVMWRKVLGSGPS--WHTKDITSPPFVV 786
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
+ + + +KV A N GEGPE + + + P + P V + IN T + VTW
Sbjct: 787 TDVGNFSAFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAA 846
Query: 517 VSPSFEEEPIIGYKVRVWEVD---QDMSRANDTIIPVGNTLDAD-----IVDLSPGKRYH 568
V+ + GYK+ + + Q + R T V T D++ + DL P Y+
Sbjct: 847 VNRETVRGRLQGYKIYLTYLGPKGQHLRREPKTTFVV--TTDSNEEKKVLGDLQPFSHYN 904
Query: 569 MRVLAFSNGGDGRMSSPAITF 589
+ V F+ G+G S + F
Sbjct: 905 LAVSVFNYKGEGPQSESILFF 925
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C + P P W + ++ K + L +S D G Y CTATN
Sbjct: 271 GQNLELECIVQGLPSPSIQWIRKDGVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATN 330
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
GM R+ V P Y+ + P A ++L C A +V W+ NG+ +
Sbjct: 331 PQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGETVKLECKADGIPKPEVT--WSINGILL 387
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
++D + P ++ G+L + N +D ++C S G + V ++E PP +
Sbjct: 388 SDIDPD----PRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQI 442
>gi|8393820|ref|NP_059041.1| neural cell adhesion molecule L1 precursor [Rattus norvegicus]
gi|56741|emb|CAA41860.1| neural cell adhesion molecule L1 [Rattus norvegicus]
Length = 1255
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 154/593 (25%), Positives = 269/593 (45%), Gaps = 42/593 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG+L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 497 QAANDQNNVTILANLQVKEATQITQG--PRSTIEKKGARVTFTCQASFDPSLQASITWRG 554
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL E ++ I+ G L I + ++D G+Y CV + + ++ ++ ++V G
Sbjct: 555 DG-----RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVG 609
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVI 233
PG +++ + H ++ + W+ + PI Y I + WF++ + V
Sbjct: 610 SPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VP 668
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + S L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 669 GNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVD 719
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ G G + ++ I+W+PL NAP I Y++ WR + ET KE V + +
Sbjct: 720 VRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQETWKEQ-TVSDPFLVV 774
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 775 SNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A+N G GP SE + T P P A+H++ + T++ + W+ P +
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLT 948
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D + + ++ +L+P +Y ++ A ++ G G
Sbjct: 949 GYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTHQGPG 1001
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 234/599 (39%), Gaps = 54/599 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G I + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRST-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L ++ +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYN 848
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G ++ + C E P P W + + + R I++N N L + V +D G Y+
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPMPTD--RVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ Q P +L C +V W
Sbjct: 311 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVT--WRI 367
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ I ++ ++ I+ G L ++N +D +C ++ G + + V
Sbjct: 368 NGMSIEKVNKDQ----KYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV 420
>gi|167045807|gb|ABZ10475.1| L1 cell adhesion molecule isoform 1 precursor (predicted) [Callithrix
jacchus]
Length = 1252
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 152/599 (25%), Positives = 260/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L++ ++G L G+ + YW+E + + + + R ++ GL+P
Sbjct: 830 LVKWRPVDLVQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHVECQSNTSLRLHWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYRPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 233/605 (38%), Gaps = 58/605 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EAGNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ ++ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLQIKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P A S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMVESRAQLLVVGSPGSVPRLALS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ K + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--KQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N G+GPE + + + PQ P I+ +N + V V WR V + + GY
Sbjct: 789 QAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITF 589
PA F
Sbjct: 905 PASEF 909
>gi|345782838|ref|XP_848767.2| PREDICTED: LOW QUALITY PROTEIN: neuronal cell adhesion molecule
isoform 2 [Canis lupus familiaris]
Length = 1303
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 254/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N G+
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGV 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L V +Q P + + C + L W + + N
Sbjct: 534 AKNEVHLEVKDATRIIKQ-PEYAVVQRGSTVSFECKVKHDHTLIPTITWLKDNGELPN-- 590
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+D L + + D G Y CV +T+ +S + V P
Sbjct: 591 -----DGRFTVDKDHLVVADVRDNDGGTYTCVANTTLDNVSASAVLSVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ + S + WT G N PI + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPIIKFIIEYEDAMHEAGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N LG PS S QY T A +P P+ + G
Sbjct: 700 ----VSGMQTTAQLKLSPYVNYSFRVMAINNLGRSLPSEASEQYLTKAAEPDTNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGMLPGLEPYSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSRPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A + G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 135/622 (21%), Positives = 231/622 (37%), Gaps = 78/622 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLSNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A LLD A+ +
Sbjct: 432 CNASNEYGYLLANTFVNVLAE-------PPRILTSA--NTLYQVIADRPALLDCAFFGSP 482
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E + + G LEI A G Y CV ++ +G +
Sbjct: 483 LPTIEWFKGAKGSALH----EDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGVAKNEV 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NS 223
+ V+ ++++ A +Q + + H + +I W N
Sbjct: 539 HLEVK------DATRIIK-QPEYAVVQRGSTVSFECKVKHDHTLIPTITWLKDNGELPND 591
Query: 224 TWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYN 281
F V +H++ +V G + N + V A L P+ +P+P Y+
Sbjct: 592 GRFTVDKDHLVVADVRDNDGGTYTCVANTTLD------NVSASAVLSVVAPTPTPAPIYD 645
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETL 340
P P + + +SW P + N+P I + I + ++
Sbjct: 646 VP-----NPPFDLELTDQLDKSVQLSW--TPGDDNNSPIIKFIIEYEDAMHEAGLWHHQT 698
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGV 397
+ G A +++ Y Y +V AIN++G P SE +AE P P V
Sbjct: 699 EVSGMQTTAQLKLSP---YVNYSFRVMAINNLGRSLPSEASEQYLTKAAE--PDTNPTAV 753
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + +TW P+ N G + +++ + ++D +E ++ ++ ++
Sbjct: 754 EGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVS 809
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
G Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 810 GTPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPV 869
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRV 571
+ GY++ W+ Q S+ N I G+ + L P Y + V
Sbjct: 870 PLKSIRGHLQGYRIYYWKA-QGSSKRNRRHIEKKILTFQGSKTHGMLPGLEPYSHYTLNV 928
Query: 572 LAFSNGGDGRMSSPAITFQMGE 593
+ G+G +SP F E
Sbjct: 929 RVVNGKGEGP-ASPDRVFNTPE 949
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 13/179 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFKK-TLQIIQVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NALGAIHHTITVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLSNGVP 400
Query: 124 IGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I E+ + P+ IDG + +N + Y+C + G + T V V P
Sbjct: 401 I------EIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANTFVNVLAEP 453
>gi|213626374|gb|AAI71560.1| Si:dkey-240a12.1 protein [Danio rerio]
Length = 1291
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 164/589 (27%), Positives = 258/589 (43%), Gaps = 47/589 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C +P PK W KD I + I +NG L I+ +SG Y+C A+N G E+
Sbjct: 449 CASFGSPLPKITWFKDSQNILNSDLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKEN 508
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V P+ + P + + C + L + IW D E
Sbjct: 509 HVHLQVKE-PTRIIRQPEYKEVQRNSIAVFECKVKHDPTLIPSMIWLK--------DNGE 559
Query: 132 L-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
L + P + L I + + D G Y C+ +T+ + S T+ V P P +++ +
Sbjct: 560 LPDDPRFEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTD 619
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASI 248
+ S + WT G + PI + I + + W N++E V G A +
Sbjct: 620 QRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTE-VSGTST-------TAQL 671
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
E L P+ Y F+V+A N +G E S PS QY T KP PS + G ++ISW
Sbjct: 672 E--LSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISW 729
Query: 309 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
L + N P + YK+ WR K+ ++ + TL NV VV F T YEV VQA
Sbjct: 730 RELSGLESNGPGLQYKVSWRMKDAEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQA 784
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
+ND G GP EVV +S E+ P VAP+ V + T V W + L ++RGRL G+
Sbjct: 785 VNDYGEGPRPEVVLGYSGENSPTVAPENVKVSVQSETEAEVHWEAVPL--SSVRGRLKGY 842
Query: 429 RIKYW------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
++ Y K+D E + + L P + Y + + A+N G+GP S
Sbjct: 843 KVTYQKMRSLHKQDYDRENPQVLIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSST 902
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE-PIIGYKVRVWEVD--QD 539
+T P PP+ V+I+ +N ++ V W +P E+ + GY ++ ++ ++
Sbjct: 903 DQQFQTPEGVP-GPPTNVNIRNLNLDSLLVEW---TPPLEDNGHLTGYLLKYQPINTTEE 958
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ + ++P N + L+ Y + A + G G PA+T
Sbjct: 959 VGLLKEVLLP-ANETSYTLDKLTHSTHYKFFLNAMTETGSG----PAVT 1002
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 206/546 (37%), Gaps = 58/546 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C + P P W K + SG L I V+ D G YSC A
Sbjct: 257 KGDTLELECIADGLPTPNISWTKVNGELPSGRFSFYSFQKTLKIKEVTEADGGDYSCLAK 316
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + ++V P ++ P + +A L C + + N +
Sbjct: 317 NRMGSSQHTITVVVRAAP-FWISAPQNLILAPKETGNLTCDVDGNPKPTITWSVNGNPIE 375
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
+ D P+ + G++ +++ + Y+C + G + V ++ PP +
Sbjct: 376 SSHND------PSRKVSDGVITLSDVQTGSSAVYQCNASNDYGYLLANAFVSVLAEPPRV 429
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ E S + D A+ G P+ KI TWF S++++ D Y
Sbjct: 430 LTSLN-HEYSVISNSRALLDCASFGSPLP--KI--------TWFKDSQNILNS--DLYHI 476
Query: 243 RKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
K ++E NV P ++ ++ IA N LG E + P+RI
Sbjct: 477 HKNGTLEINVAQPQNSGKYTCIASNNLGNKE---------NHVHLQVKEPTRIIRQPEYK 527
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
S + ++ P + + W K N E + E G+ + + + + T
Sbjct: 528 EVQRNSIAVFECKVKHDPTLIPSMIWLKDNG-ELPDDPRFEVGSDSLTIHDVTEDDEGTY 586
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
++ ++ S +T+ D P + ++ +TW P + I
Sbjct: 587 TCIRNTTLDQ---DSASATLTVVEQPD----PPTDLELTDQRERSVRLTWTPGDEHNSPI 639
Query: 422 RGRLIGHRIKYWKEDNPEETAVYY----LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+ LI + ED+ E V+ +S T+ L L P Y +V+A N G
Sbjct: 640 KLFLIQY------EDSLHEPGVWLNMTEVSGTSTTAQL--ELSPYVYYSFRVLALNGVGL 691
Query: 478 GPESERYLERTYRKAPQKP---PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV--R 532
S+ R YR P KP PS V + G +P T+ ++WR +S P + YKV R
Sbjct: 692 SESSDP--SRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQYKVSWR 749
Query: 533 VWEVDQ 538
+ + +Q
Sbjct: 750 MKDAEQ 755
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDS----GIYS 59
N+ IFC + P P F W ++G K+ GNL+I +S + + G+Y
Sbjct: 56 NINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGTGNLVID-ISGEKAEVYEGVYQ 114
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRC 103
C A N HG S +I P + ++ IT+ +L L+C
Sbjct: 115 CIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQC 159
>gi|260791166|ref|XP_002590611.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
gi|229275806|gb|EEN46622.1| hypothetical protein BRAFLDRAFT_123608 [Branchiostoma floridae]
Length = 2280
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 223/499 (44%), Gaps = 33/499 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG V P P WKK+G + GGR + + G+L I+ V D G+Y+C
Sbjct: 972 ASAGGTVVFNMRRRGVPVPTVTWKKNGANVQLGGRYSMLDGGSLRITGVQLSDGGMYTCQ 1031
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
TN G S L V G S P ++T+ ++ L CS DV W HNG
Sbjct: 1032 LTNRMGAATSTATLTVQDGSSRSSGNPSRVTVDYQQDGTLPCSTGGSSSSDVIKTWFHNG 1091
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
R+ DL+ + G L+I + G Y C V++ G + + V P
Sbjct: 1092 HRV---DLSSDHY--VKDSDGSLKILQTTKVMEGTYVCSVETRTGSREQRAVLTVRASPD 1146
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV---SEHVIGKEVD 238
P V+ +V + + WT G+ N P+T Y + RT + +W + S V+ +
Sbjct: 1147 APLHVRASDVSSRTGRVAWTAGSDNHSPVTGYIVQGRTQTDRSWTTLESGSAEVLADD-- 1204
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R + ++ +L P + YEF+V+ N +G GEPS PSP Y+T +D P +GGGG
Sbjct: 1205 ----RMQTTVSELL-PGNDYEFRVLGMNAIGLGEPSLPSPIYSTHSDAPVAKVGGVGGGG 1259
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF 357
G IGDL I W L + + P YKIF++K T+ S N+ V P
Sbjct: 1260 GDIGDLVIRWNALAEKYRGGPGFGYKIFFKKLGSTDDFSVVQVTDPNMDHYVHSPDPPLG 1319
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +E KVQA N G GP S+ +FS E P+ N AI+ T + + L
Sbjct: 1320 VFVAHEAKVQAFNQYGTGPMSDRAVVFSGEGPPKQVK--------NLKAIDATDSSVSL- 1370
Query: 418 RENI---RGRLIGHRIKYWKEDNPEETA-----VYYLSRTTRNWALIVGLQPDTKYYVKV 469
R +I G++IG+R+ Y+ ++ +E + L ++ L Y +V
Sbjct: 1371 RWDIPEHNGQVIGYRVLYFLTNDDDENGANSAEMKQLDVGPETTTVVGNLTAGESYTFQV 1430
Query: 470 MAYNNAGEGPESERYLERT 488
+G GP S+ + +T
Sbjct: 1431 KGRTASGYGPYSDAVVAKT 1449
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 131/592 (22%), Positives = 233/592 (39%), Gaps = 68/592 (11%)
Query: 22 FVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78
+ W +G ++ GGR + +G +L IS + +DSG+Y C A N G S L
Sbjct: 897 YTWLHNGQVLNGGGRVALASSGSTASLSISGLRAEDSGVYQCVAFNQWGRANSAAELRAQ 956
Query: 79 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 137
PS+ +L P+I +A + + V W NG + +L
Sbjct: 957 DEPPSFGLRLLPEIIASAGGTVVFNMRRRGVPVPTVT--WKKNGANV------QLGGRYS 1008
Query: 138 NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG--VQVVEVHKTS 195
+DGG L IT +D G Y C + + +G ++ T+ V+ G +V ++
Sbjct: 1009 MLDGGSLRITGVQLSDGGMYTCQLTNRMGAATSTATLTVQDGSSRSSGNPSRVTVDYQQD 1068
Query: 196 ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 255
T+ + G ++ + TWF+ + H + D Y + S++ +L
Sbjct: 1069 GTLPCSTGGSSSSDVI-----------KTWFH-NGHRVDLSSDHYVKDSDGSLK-ILQTT 1115
Query: 256 STYEFKVIAGNELGYG--EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313
E + E G E + +P + S + G+ ++W
Sbjct: 1116 KVMEGTYVCSVETRTGSREQRAVLTVRASPDAPLHVRASDVSSRTGR-----VAWT--AG 1168
Query: 314 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV-----VRIPSEFYYTEYEVKVQA 368
++P Y + R + D +S T E G+ + + +YE +V
Sbjct: 1169 SDNHSPVTGYIVQGRTQTD---RSWTTLESGSAEVLADDRMQTTVSELLPGNDYEFRVLG 1225
Query: 369 INDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL-I 426
+N +G G S I+S D P GV G + + + WN + E RG
Sbjct: 1226 MNAIGLGEPSLPSPIYSTHSDAPVAKVGGVGGGGGDIGDLVIRWNALA---EKYRGGPGF 1282
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD------TKYYVKVMAYNNAGEGPE 480
G++I + K + ++ +V ++ + + PD + KV A+N G GP
Sbjct: 1283 GYKIFFKKLGSTDDFSVVQVTDPNMDHYV---HSPDPPLGVFVAHEAKVQAFNQYGTGPM 1339
Query: 481 SERYLERTYRKAPQKPPSAV-HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQ 538
S+R + + + PP V ++K I+ T V+ R+ P + +IGY+V + D
Sbjct: 1340 SDRAVVFS----GEGPPKQVKNLKAIDATDSSVSLRWDIPEHNGQ-VIGYRVLYFLTNDD 1394
Query: 539 DMSRANDT---IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D + AN + VG + +L+ G+ Y +V + G G S +
Sbjct: 1395 DENGANSAEMKQLDVGPETTTVVGNLTAGESYTFQVKGRTASGYGPYSDAVV 1446
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTAT 63
VT+ C E P P++ W+K+G N++ R GNL+I +D D+G+Y C A
Sbjct: 584 VTLNCKGEGIPAPQYRWRKNGQELNVLSD--ERLTLIGGNLVIDNPQKDRDAGLYECLAF 641
Query: 64 NVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G+ S+ L + P +T+ +L C E + + W
Sbjct: 642 NDLGIVVSRPSNLTFAFVERFSTDARPGMTVLEGHGARLVCDP-PEGHPGLVFHWVKTQF 700
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+++ + ++ G L +DAGEY+C+V+S+ S + + +EG
Sbjct: 701 ---PSFVDQDDRVFVSETSGDLYFAQVRESDAGEYQCLVQSSTDH-SPLSEISIEG 752
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 114/570 (20%), Positives = 199/570 (34%), Gaps = 72/570 (12%)
Query: 42 NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL 101
N L+I+ + D+G Y C A + G +LIV P + + L + ++++L
Sbjct: 827 NQALIITKLDLQDAGFYECRAASSSGSASGSTQLIVQGVPQFLQGL-------SSQHVEL 879
Query: 102 RCSAHTEELLD----VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157
AH E D V+Y W HNG + L + L I+ D+G Y
Sbjct: 880 GGRAHWEVRTDGDYTVSYTWLHNGQVLNGGGRVALASSGSTAS---LSISGLRAEDSGVY 936
Query: 158 ECVVKSTVGKISTKTTVIVEGPP---GL---------PGGVQVVEVHKTSA---TIQWTD 202
+CV + G+ ++ + + P GL GG V + + T+ W
Sbjct: 937 QCVAFNQWGRANSAAELRAQDEPPSFGLRLLPEIIASAGGTVVFNMRRRGVPVPTVTWKK 996
Query: 203 GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKV 262
N + Y ++ + T +S+ G + T R A+ ST V
Sbjct: 997 NGANVQLGGRYSMLDGGSLRITGVQLSDG--GMYTCQLTNRMGAAT-------STATLTV 1047
Query: 263 IAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIY 322
G+ G PS + Y P GG D+ +W + + Y
Sbjct: 1048 QDGSSRSSGNPSRVTVDYQQDGTLPCST------GGSSSSDVIKTWFHNGHRVDLSSDHY 1101
Query: 323 YKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 382
K D++ + L+ ++ Y E + G + V+T
Sbjct: 1102 VK-------DSDGSLKILQ--------TTKVMEGTYVCSVETR------TGSREQRAVLT 1140
Query: 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA 442
+ ++ D AP V + +S V W + G ++ R + + E+
Sbjct: 1141 VRASPD----APLHVRASDVSSRTGRVAWTAGSDNHSPVTGYIVQGRTQTDRSWTTLESG 1196
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVH 501
+ R + L P Y +V+ N G G P + T+ AP V
Sbjct: 1197 SAEVLADDRMQTTVSELLPGNDYEFRVLGMNAIGLGEPSLPSPIYSTHSDAPVAKVGGVG 1256
Query: 502 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV--DQDMSRANDTIIPVGNTLDADIV 559
G + + + W ++ + P GYK+ ++ D S T + + + +
Sbjct: 1257 GGGGDIGDLVIRWNALAEKYRGGPGFGYKIFFKKLGSTDDFSVVQVTDPNMDHYVHSPDP 1316
Query: 560 DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
L + +V AF+ G G MS A+ F
Sbjct: 1317 PLGVFVAHEAKVQAFNQYGTGPMSDRAVVF 1346
>gi|46369969|gb|AAS89820.1| neuronal cell adhesion molecule long isoform Nc1 [Rattus norvegicus]
Length = 1209
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 471 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 529 AKNEVHLEI-KDPTRFIKQPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 588 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 640
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 641 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 695 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 751 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 807
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 808 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 866 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 923
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 924 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 980
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 981 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1039
Query: 587 IT 588
IT
Sbjct: 1040 IT 1041
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 128/615 (20%), Positives = 231/615 (37%), Gaps = 83/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 370 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 428
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 429 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 479
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 480 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 535
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------NSTW 225
++ P + ++ A +Q + + H + +I W N
Sbjct: 536 EIKDP------TRFIK-QPEYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDER 588
Query: 226 FNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+V +H++ +V YT ++++V ++ +V+A +P+P
Sbjct: 589 FSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTPAPI 638
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSE 338
Y+ P P + + ++W P + N+P + I + ++
Sbjct: 639 YDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGLWRH 691
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQ 395
+ G A +++ Y Y +V A N +G P SE +AE P P
Sbjct: 692 QAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQNPT 746
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + +TW P+ + N G + +++ + ++D +E ++ ++ +
Sbjct: 747 AVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YI 802
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ G Y +KV A N+ G PE + + P P V + +N T W
Sbjct: 803 VSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWD 862
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHM 569
V P + GY++ W+ Q S+ N I G+ + L P Y +
Sbjct: 863 PVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVL 921
Query: 570 RVLAFSNGGDGRMSS 584
V + G+G S+
Sbjct: 922 NVRVVNGKGEGPASA 936
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 280 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 338
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 339 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 395
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 396 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 448
>gi|113679606|ref|NP_001038270.1| neuronal cell adhesion molecule precursor [Danio rerio]
Length = 1285
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 164/589 (27%), Positives = 257/589 (43%), Gaps = 47/589 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C +P PK W KD I + I +NG L I+ +SG Y+C A+N G E+
Sbjct: 470 CASFGSPLPKITWFKDSQSILNSDLYHIHKNGTLEINVAQPQNSGKYTCIASNNLGNKEN 529
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V P+ + P + + C + L + IW D E
Sbjct: 530 HVHLQVKE-PTRIIRQPEYKEVQRNSIAVFECKVKHDPTLIPSMIWLK--------DNGE 580
Query: 132 L-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
L + P + L I + + D G Y C+ +T+ + S T+ V P P +++ +
Sbjct: 581 LPDDPRFEVGSDSLTIHDVTEDDEGTYTCIRNTTLDQDSASATLTVVEQPDPPTDLELTD 640
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASI 248
+ S + WT G + PI + I + + W N++E V G A +
Sbjct: 641 QRERSVRLTWTPGDEHNSPIKLFLIQYEDSLHEPGVWLNMTE-VSGTST-------TAQL 692
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
E L P+ Y F+V+A N +G E S PS QY T KP PS + G ++ISW
Sbjct: 693 E--LSPYVYYSFRVLALNGVGLSESSDPSRQYRTNPAKPDVNPSDVEVSGTSPDTMTISW 750
Query: 309 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
L + N P + YK+ WR K+ ++ + TL NV VV F T YEV VQA
Sbjct: 751 RELSGLESNGPGLQYKVSWRMKDAEQWTTVTL---ANVSQHVVTGTPTF--TLYEVTVQA 805
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
+ND G GP EVV +S E+ P VAP+ V + T V W + L ++RGRL G+
Sbjct: 806 VNDYGEGPRPEVVLGYSGENSPTVAPENVKVSVQSGTEAEVHWEAVPL--SSVRGRLKGY 863
Query: 429 RIKYW------KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
++ Y K+D E + + L P + Y + + A+N G+GP S
Sbjct: 864 KVTYQKMRSLHKQDYDRENPQVLIFSGEETVGRLPDLHPYSHYRLNIRAFNGHGDGPSST 923
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE-PIIGYKVRVWEVD--QD 539
+T P PP+ V+I+ +N ++ V W +P E+ + GY ++ ++ ++
Sbjct: 924 DQQFQTPEGVP-GPPTNVNIRNLNLDSLLVEW---TPPLEDNGHLTGYLLKYQPINTTEE 979
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ ++P N + L+ Y + A + G G PA+T
Sbjct: 980 AGLLKEVLLP-ANETSYTLDKLTHSTHYKFFLNAMTETGSG----PAVT 1023
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 206/552 (37%), Gaps = 70/552 (12%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C + P P W K + SG L I V+ D G Y C A
Sbjct: 278 KGDTLELECIADGLPTPNISWTKVNGELPSGRFSFYSFQKTLKIKEVTEADGGDYRCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + ++V P ++ P + +A L C + + N +
Sbjct: 338 NRMGSSQHTITVVVRAAP-FWISAPQNLILAPKETGNLTCDVDGNPKPTITWSVNGNPIE 396
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
+ D P+ + G++ +++ + Y+C + G + V ++ PP +
Sbjct: 397 SSHND------PSRKVSDGVITLSDVQTGSSAVYQCNASNDYGYLLANAFVSVLAEPPRV 450
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ E S + D A+ G P+ KI TWF S+ ++ D Y
Sbjct: 451 LTSLN-HEYSVISNSRALLDCASFGSPLP--KI--------TWFKDSQSILNS--DLYHI 497
Query: 243 RKEASIE-NVLVPWSTYEFKVIAGNELGYGEP------SSPSPQYNTPADKPYQAPSRIG 295
K ++E NV P ++ ++ IA N LG E P+ P K Q S I
Sbjct: 498 HKNGTLEINVAQPQNSGKYTCIASNNLGNKENHVHLQVKEPTRIIRQPEYKEVQRNS-IA 556
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
K+ ++ P + + W K N E + E G+ + + +
Sbjct: 557 VFECKV--------------KHDPTLIPSMIWLKDNG-ELPDDPRFEVGSDSLTIHDVTE 601
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ T ++ ++ S +T+ D P + ++ +TW P +
Sbjct: 602 DDEGTYTCIRNTTLDQ---DSASATLTVVEQPD----PPTDLELTDQRERSVRLTWTPGD 654
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYY----LSRTTRNWALIVGLQPDTKYYVKVMA 471
I+ LI + ED+ E V+ +S T+ L L P Y +V+A
Sbjct: 655 EHNSPIKLFLIQY------EDSLHEPGVWLNMTEVSGTSTTAQL--ELSPYVYYSFRVLA 706
Query: 472 YNNAGEGPESERYLERTYRKAPQKP---PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
N G S+ R YR P KP PS V + G +P T+ ++WR +S P +
Sbjct: 707 LNGVGLSESSDP--SRQYRTNPAKPDVNPSDVEVSGTSPDTMTISWRELSGLESNGPGLQ 764
Query: 529 YKV--RVWEVDQ 538
YKV R+ + +Q
Sbjct: 765 YKVSWRMKDAEQ 776
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDS----GIYS 59
N+ IFC + P P F W ++G K+ GNL+I +S + + G+Y
Sbjct: 57 NINIFCEAKGKPHPSFSWTRNGTHFDVEKDPKVVMMPGTGNLVID-ISGEKAEVYEGVYQ 115
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRC 103
C A N HG S +I P + ++ IT+ +L L+C
Sbjct: 116 CIARNEHGSAVSNNIVIRQSRSPLWSKEKNEPITVQRGTSLILQC 160
>gi|1842431|gb|AAB47755.1| ankyrin binding cell adhesion molecule NrCAM [Rattus norvegicus]
Length = 1215
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 477 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 534
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 535 AKNEVHLEI-KDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 593
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 594 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 646
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 647 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 700
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 701 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 756
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 757 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 813
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 814 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 871
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 872 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 929
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 930 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 986
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 987 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1045
Query: 587 IT 588
IT
Sbjct: 1046 IT 1047
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 131/618 (21%), Positives = 230/618 (37%), Gaps = 89/618 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 376 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 434
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 435 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 485
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 486 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 541
Query: 175 IVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------N 222
++ P PG V K S + + H + +I W N
Sbjct: 542 EIKDPTRFIKQPGYAVVQRGSKVSFECK----------VKHDHTLIPTILWLKDNGELPN 591
Query: 223 STWFNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
F+V +H++ +V YT ++++V ++ +V+A +P
Sbjct: 592 DERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTP 641
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEF 335
+P Y+ P P + + ++W P + N+P + I + ++
Sbjct: 642 APIYDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGL 694
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQV 392
+ G A +++ Y Y +V A N +G P SE +AE P
Sbjct: 695 WRHQAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQ 749
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P V G + +TW P+ + N G + +++ + ++D +E ++ ++
Sbjct: 750 NPTAVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK- 806
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 807 -YIVSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEA 865
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKR 566
W V P + GY++ W+ Q S+ N I G+ + L P
Sbjct: 866 HWDPVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSH 924
Query: 567 YHMRVLAFSNGGDGRMSS 584
Y + V + G+G S+
Sbjct: 925 YVLNVRVVNGKGEGPASA 942
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 286 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 344
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 345 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 401
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 402 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 454
>gi|38372401|sp|P97686.2|NRCAM_RAT RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM; AltName:
Full=Ankyrin-binding cell adhesion molecule NrCAM;
AltName: Full=Neuronal surface protein Bravo;
Short=rBravo; AltName: Full=NgCAM-related cell adhesion
molecule; Short=Ng-CAM-related; Flags: Precursor
Length = 1214
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 534 AKNEVHLEI-KDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 593 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 871 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1044
Query: 587 IT 588
IT
Sbjct: 1045 IT 1046
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 131/618 (21%), Positives = 230/618 (37%), Gaps = 89/618 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 375 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 433
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 434 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 484
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 485 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 540
Query: 175 IVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------N 222
++ P PG V K S + + H + +I W N
Sbjct: 541 EIKDPTRFIKQPGYAVVQRGSKVSFECK----------VKHDHTLIPTILWLKDNGELPN 590
Query: 223 STWFNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
F+V +H++ +V YT ++++V ++ +V+A +P
Sbjct: 591 DERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTP 640
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEF 335
+P Y+ P P + + ++W P + N+P + I + ++
Sbjct: 641 APIYDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGL 693
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQV 392
+ G A +++ Y Y +V A N +G P SE +AE P
Sbjct: 694 WRHQAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQ 748
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P V G + +TW P+ + N G + +++ + ++D +E ++ ++
Sbjct: 749 NPTAVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK- 805
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 806 -YIVSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEA 864
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKR 566
W V P + GY++ W+ Q S+ N I G+ + L P
Sbjct: 865 HWDPVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSH 923
Query: 567 YHMRVLAFSNGGDGRMSS 584
Y + V + G+G S+
Sbjct: 924 YVLNVRVVNGKGEGPASA 941
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 344 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 401 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 453
>gi|47228829|emb|CAG07561.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1197
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 233/491 (47%), Gaps = 33/491 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTA 62
+G +V + C+ ++P P W + N G R +NG+L I ++DSG Y C A
Sbjct: 372 QGVDVIMNCSAFSSPLPTISWFRGANQEAVKGERFFTLQNGSLQIIGAEKNDSGKYVCVA 431
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTHN 120
N G L V P+ P + + QL C A ++ L +++ W +
Sbjct: 432 LNTEGKAAVTAVLDV-KDPTRIVSGPRDAEVMSGATAQLICQAEYDKSLQDSFVLVWRKD 490
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G ++ L+ E + +L I N + D+G Y C+ ++++ +++ + V P
Sbjct: 491 G---DDIPLSVEENSRYAVADSMLRIMNVALNDSGTYMCIARTSLDEMNATALLTVLDVP 547
Query: 181 GLPGGVQVVEVHK-TSATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVD 238
P V++ E+ + ++ W G+ + +T + + + W S + + V G +
Sbjct: 548 DAPLKVEISEIRSPRNISLSWVPGSDHNSSVTEFVVEFQESQWESGVWKKLQKVPGNQ-- 605
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
A+ + VL +Y+F+V A N +G G P P+ + TP P + P I G
Sbjct: 606 -------ATADLVLHGDLSYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQG 658
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 357
+ ISWE LP +QN P YK+ +R+ + +++ +K+ VVR S F
Sbjct: 659 HLPHQMDISWESLPVTEQNGPGFEYKVSYRRLGVEDQWREHMVKQSS----FVVRNTSTF 714
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YEVK+Q+ ND+G GPE +VVT +S ED+P AP+ V FN+T + V+W P+
Sbjct: 715 --VPYEVKIQSRNDIGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTVLRVSWTPVP-- 770
Query: 418 RENIRGRLIGHRIKYWKED---NPEETAVYYLSRT---TRNWALIVGLQPDTKYYVKVMA 471
+RG L G+++ + + NP T S + R A++ GL+P ++Y + V
Sbjct: 771 PATVRGHLGGYKLHWSRLRSLLNPNRTLDQRQSLSFPGRRAQAMVPGLEPFSEYRLTVSV 830
Query: 472 YNNAGEGPESE 482
YN G GP S+
Sbjct: 831 YNKKGNGPNSD 841
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 139/616 (22%), Positives = 249/616 (40%), Gaps = 65/616 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V I C+ P +W+K+G + R++ ++ +++ +D+ +Y C A
Sbjct: 272 GSDVHIKCSVSGKPSSDIIWRKNGELFIDDPENNRRVLDD-TVVLHNAGPEDTAVYQCDA 330
Query: 63 TNVHG----------MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
+N HG M ES+G L+ + P + + ++ + CSA + L
Sbjct: 331 SNGHGGLLANINIMVMSESQGSLLDM-TPRILTSDSQEYPVVQGVDVIMNCSAFSSPLPT 389
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+++ N + L+ G L+I A D+G+Y CV +T GK +
Sbjct: 390 ISWFRGANQEAVKGERFFTLQN-------GSLQIIGAEKNDSGKYVCVALNTEGKAAVTA 442
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNWNSTWFNVSEH 231
+ V+ P + G + EV + AT Q A + + + ++ R + + +V E+
Sbjct: 443 VLDVKDPTRIVSGPRDAEV-MSGATAQLICQAEYDKSLQDSFVLVWRKDGDDIPLSVEEN 501
Query: 232 VIGKEVDRYT-GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
RY I NV + + + IA L ++ + P D P +
Sbjct: 502 ------SRYAVADSMLRIMNVALN-DSGTYMCIARTSLDEMNATALLTVLDVP-DAPLKV 553
Query: 291 P-SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGI 348
S I ++S+SW +P N+ + + F + ++ + K GN
Sbjct: 554 EISEIRSPR----NISLSW--VPGSDHNSSVTEFVVEFQESQWESGVWKKLQKVPGNQAT 607
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
A + + + Y+ +V AIN VGPGP + T + P PQ + +G +
Sbjct: 608 ADLVLHGDL---SYKFRVYAINAVGPGPPGDPTETHKTPPAAPDRNPQDIKIQGHLPHQM 664
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+++W + + +N G +++ Y + ED E V S RN + V
Sbjct: 665 DISWESLPVTEQN--GPGFEYKVSYRRLGVEDQWREHMVKQSSFVVRNTSTFV------P 716
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y VK+ + N+ G GPE + + P P V ++ N T + V+W V P+
Sbjct: 717 YEVKIQSRNDIGWGPEPKVVTGYSGEDVPAAAPRDVAVEVFNTTVLRVSWTPVPPATVRG 776
Query: 525 PIIGYKVRVWEVDQDMSRANDTI-------IPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GYK+ W + + N T+ P G A + L P Y + V ++
Sbjct: 777 HLGGYKLH-WSRLRSLLNPNRTLDQRQSLSFP-GRRAQAMVPGLEPFSEYRLTVSVYNKK 834
Query: 578 GDGRMSSPAITFQMGE 593
G+G S P +TF E
Sbjct: 835 GNGPNSDP-VTFSTPE 849
>gi|149029901|gb|EDL85013.1| rCG43874 [Rattus norvegicus]
Length = 1133
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/593 (25%), Positives = 266/593 (44%), Gaps = 42/593 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 315 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 374
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 375 QAANDQNNVTILANLQVKEATQITQG--PRSTIEKKGARVTFTCQASFDPSLQASITWRG 432
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 433 DG-----RDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVG 487
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVI 233
PG +++ + H ++ + W+ + PI Y I + WF++ + V
Sbjct: 488 SPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VP 546
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + S L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 547 GNQT---------STTLKLSPYVHYTFRVTAINKYGSGEPSPVSETVVTPEAAPEKNPVD 597
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ G G + ++ I+W+PL NAP I Y++ WR + ET KE V + +
Sbjct: 598 VRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQETWKEQ-TVSDPFLVV 652
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 653 SNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 712
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 713 VDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHV 770
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A+N G GP SE + T P P A+H++ + T++ + W+ P +
Sbjct: 771 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLT 826
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D + + ++ +L+P +Y ++ A + G G
Sbjct: 827 GYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPG 879
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 231/599 (38%), Gaps = 54/599 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G I + + + E G+L++S V D+ + C
Sbjct: 222 GPGETARLDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 281
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 282 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 328
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 329 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILAN 388
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 389 LQVKEATQITQGPRST-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 440
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 441 -GDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 498
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR 352
K + +SW P E N+P Y I F K+ E K GN ++
Sbjct: 499 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 555
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN G G S V T+ + E P+ P V G + + +TW
Sbjct: 556 LSP---YVHYTFRVTAINKYGSGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 612
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 613 KPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQTVSDPFLVVSNTSTFVPYEIKVQ 666
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 667 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYN 726
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 727 VTYWWKGSQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 784
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G ++ + C E P P W + + + R I++N N L + V +D G Y+
Sbjct: 131 ALQGQSLILECIAEGFPTPTIKWLHPSDPMPTD--RVIYQNHNKTLQLLNVGEEDDGEYT 188
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ Q P +L C +V W
Sbjct: 189 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVT--WRI 245
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ I ++ ++ I+ G L ++N +D +C ++ G + + V
Sbjct: 246 NGMSIEKVNKDQ----KYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV 298
>gi|326679087|ref|XP_001921978.2| PREDICTED: neurofascin-like [Danio rerio]
Length = 1150
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 230/529 (43%), Gaps = 47/529 (8%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GN+T+ C +PKP W K G GGR + NG L I D G Y C A+N
Sbjct: 433 GNLTLLDCPYFGSPKPVLRWSKGGVGTLEGGRYRTLPNGTLEIRNTKLQDQGAYVCVASN 492
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR-------CSAHTEELLDVAYIW 117
V G DE + +L V + P KI A H + +R C + LDV W
Sbjct: 493 VIGRDEKEVQLEV--------KEPIKIIRAPHNTVVIRGSLARFDCKIKFDTSLDVTVTW 544
Query: 118 THNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+ + +G + E+ L I + D G Y C VKS + +++T +
Sbjct: 545 LKDKKFLILGRRMTKDEES---------LSIADVYRRDEGVYTCRVKSELEEVTTSAKLT 595
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V P P +++ + + S + WT G +N PI Y I N + ++ + K
Sbjct: 596 VMDRPDPPTDLEISDPSERSVRLTWTPGLSNHSPIKEYLIQYTENLLADYWLLPSG--WK 653
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+ Y G + I L P+ Y F+VIA N +G +PS S Y T P P I
Sbjct: 654 NLTSYPGSLNSVILQ-LTPFVEYTFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNIQ 712
Query: 296 GGGGKI--GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G G + ++ ISWEPL + N P + Y ++WR+++ E K Y I
Sbjct: 713 GLGYGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRD----SREEWKNYTTYWWCSTII 768
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE+KVQAIN G GPES VV +S ED P AP + ST + V W P
Sbjct: 769 YDTDTFTPYEIKVQAINFFGYGPESPVVIGYSGEDRPVAAPSELSVSDIESTTLTVHWEP 828
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW--------ALIVGLQPDTKY 465
+ R +I G + +++ YW+E + V T+++ + GL P + Y
Sbjct: 829 VA--RADIMGEIKEYKVYYWRESSRLPWHVVTRRIKTKSFKANGPRLSGTLTGLVPFSNY 886
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ ++ NN EGP S +T P P S I + T+++ W
Sbjct: 887 KMYIVVANNRYEGPPSHNIEFQTPEGVPTIPRS-FRIMHRHYDTLYLDW 934
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 7/172 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C P P W KD + G++ N L I ++ DD G Y CTA+N
Sbjct: 249 GEELILECFAAGVPTPSIKWTKDYEEMTMTGKKLENFNKTLRIKKIAMDDGGDYICTASN 308
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + + V P + E+ P + ++ + C A + W NG I
Sbjct: 309 RMGSLDHIITVRVKSVPFWLEK-PESLVLSRDDGGSMVCRADGIPRPQIQ--WLVNGEPI 365
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ +P + G L A ++C + G I T + V
Sbjct: 366 SDAP----RSPGRQVSGDTLTFRGVVPDSAAVFQCNASNPYGYIMTNAFLAV 413
>gi|145652526|gb|ABP88252.1| non-neural L1CAM [Homo sapiens]
Length = 1248
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 260/593 (43%), Gaps = 42/593 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 493 LAANDQNNVTIMANLKVTDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 550
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 551 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 605
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
PG + + ++H ++ + W+ + PI Y I F E GK
Sbjct: 606 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIE---------FEDKEMAPGK 656
Query: 236 --EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ + G + ++ L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 657 WYSLGKVPGNQTSTTLK-LSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVD 715
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ G G + ++ I+W+PL NAP + Y++ WR + E + V + +
Sbjct: 716 VKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDPFLVV 770
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V W P
Sbjct: 771 SNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRP 830
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW+E + + + ++ + ++ GL+P + Y++
Sbjct: 831 VDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHL 888
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A+N G GP SE + T P P A+H++ + T++ + W+ P +
Sbjct: 889 EVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHNGVLT 944
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 945 GYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 147/639 (23%), Positives = 246/639 (38%), Gaps = 75/639 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS--- 169
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 505
Query: 170 ----TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225
T T I +GP + K + + +T A+ + W
Sbjct: 506 NLKVTDATQITQGPRST--------IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDG 552
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
++ E +G + D+Y + + L + +A EL E + +P
Sbjct: 553 RDLQE--LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGP 609
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYG 344
P S + + +SW P E NAP Y I + K + +L K G
Sbjct: 610 VPRLVLSDLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPGKWYSLGKVPG 665
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFN 403
N +++ Y Y +V AIN GPG S V T+ + E P+ P V G
Sbjct: 666 NQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNE 722
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPD 462
+T + +TW P+ + N +++Y + P+ T + + + L+V
Sbjct: 723 TTNMVITWKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTF 776
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G+GPE + + + PQ P I+ +N + V V WR V +
Sbjct: 777 VPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQV 836
Query: 523 EEPIIGYKVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ + GY V W + D ++ NT + L P YH+ V AF
Sbjct: 837 KGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF--- 893
Query: 578 GDGRMSSPAITFQMGEEKEFKSGSPALY---SASTTLLL 613
+GR S PA F + AL+ ++T+LLL
Sbjct: 894 -NGRGSGPASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|225637535|ref|NP_001139503.1| neuronal cell adhesion molecule isoform 2 precursor [Mus musculus]
Length = 1186
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 254/592 (42%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ D L +++ D G Y C +T+ S + V P P +++
Sbjct: 587 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I + W + +E +
Sbjct: 640 TNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQT 689
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I
Sbjct: 690 TAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVI 749
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 750 TWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 804
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE V S ED+P VAP V NST V W+P+ +++RG L
Sbjct: 805 VQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP--PKSVRGHL 862
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + T+ ++ GLQP + Y + V N GEGP
Sbjct: 863 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGP 922
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 923 ASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYILQYQPINST 979
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ AIT
Sbjct: 980 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEAIT 1030
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 337 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 394 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 447
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 369 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 427
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 428 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 478
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 479 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 534
Query: 175 IVEGP 179
++ P
Sbjct: 535 EIKDP 539
>gi|28972161|dbj|BAC65534.1| mKIAA0343 protein [Mus musculus]
Length = 1202
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 254/592 (42%), Gaps = 46/592 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 486 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 543
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 544 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 602
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ D L +++ D G Y C +T+ S + V P P +++
Sbjct: 603 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVDVPNPPFDLEL 655
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I + W + +E +
Sbjct: 656 TNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE----------VSGTQT 705
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P Q P + G G + +L I
Sbjct: 706 TAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEGLGTEPDNLVI 765
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 766 TWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 820
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE V S ED+P VAP V NST V W+P+ +++RG L
Sbjct: 821 VQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP--PKSVRGHL 878
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + + ++ + T+ ++ GLQP + Y + V N GEGP
Sbjct: 879 QGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVRVVNGKGEGP 938
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-- 537
S T P P S +K +NPT +T + PS + Y ++ ++
Sbjct: 939 ASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYILQYQPINST 995
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
++ D IP N + +L+ RY A ++ G G +++ AIT
Sbjct: 996 HELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEAIT 1046
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 295 GNVLSLECIAEGLPTPIIYWIKEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 352
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 353 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 409
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 410 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 463
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 385 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 443
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 444 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 494
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 495 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 550
Query: 175 IVEGP 179
++ P
Sbjct: 551 EIKDP 555
>gi|317418927|emb|CBN80965.1| Neural cell adhesion molecule L1-like protein [Dicentrarchus labrax]
Length = 1395
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 159/613 (25%), Positives = 267/613 (43%), Gaps = 60/613 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG V + C ++P W KD + G R + +NG+L I V + D+G Y+C
Sbjct: 448 AVEGKGVMMHCKVFSSPPSTVTWSKDDSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTC 507
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 118
A N G + ++ + P+ P + I QL C A +E D+ +W
Sbjct: 508 LAKNTEG-SSAIDTMLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWE 566
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ + I LN E ++ G+L+I N S D G Y CV ++ V + + +IV G
Sbjct: 567 KDDMEIA---LNYTENSRYFVEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLG 623
Query: 179 P-------------------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IAR 218
P P + + E S ++W G + T + I
Sbjct: 624 ELTYQQYFCSQAKGSDTPNVPDAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEE 683
Query: 219 TNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ W W KE+ R G +++ L Y F+V N +G G S P+
Sbjct: 684 SQWEPGNW---------KELLRVPGNHNSAVLK-LHGNVDYCFRVSGVNSVGRGPSSEPT 733
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQ 336
+Y PA P + P I G ++ I+WEPL + N P + YK+ +R+++ + ++Q
Sbjct: 734 ERYKPPAAAPDKNPENIKIEGHLAHEMDINWEPLLPIEHNGPGLEYKVSYRRQDLEEDWQ 793
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQG 396
+K + V V P+ + YE+K+QA N+ G GP+ ++VT +S ED P AP
Sbjct: 794 EHMVKRHSFV---VKNTPT---FVPYEIKIQAKNNQGWGPDPKIVTGYSGEDFPSAAPDD 847
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------ 450
V NS+ + V+W + ++ + G L G+RI +W+ + ++ + + T
Sbjct: 848 VAVEVMNSSVVKVSWTRVH--KDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHTLTIPGD 905
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
RN A + GL P ++Y + VM +N G GP S +T P+K P + + TV
Sbjct: 906 RNHAAVPGLTPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNP-VFRVTDVQKHTV 964
Query: 511 HVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGN--TLDADIVDLSPGKRY 567
+ W +P E I+ GY + ++ + + N T + DL P +Y
Sbjct: 965 SLVW---APPLEPNGILTGYLLEYQLINDTEEVGPLQTVDISNPDTTKWTLRDLEPVSKY 1021
Query: 568 HMRVLAFSNGGDG 580
+ + + + G G
Sbjct: 1022 KLYLRSCTTVGCG 1034
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 134/620 (21%), Positives = 242/620 (39%), Gaps = 63/620 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V I C+ P+P W+ +G + RK+ + +L+ DS +Y C A
Sbjct: 358 GSDVLIKCSASGTPQPTITWRVNGVPLQEAPAANRKVLGD-TILLRNAKASDSAVYQCEA 416
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
+N H S +++++ LPP I + + + + C + V
Sbjct: 417 SNRHRTLLSNANIMIMN-------LPPMILTKEGEDYSAVEGKGVMMHCKVFSSPPSTVT 469
Query: 115 YIWTHNGVRIGNMDLNE-LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W+ + D +E +E P + D G LEI + D G+Y C+ K+T G + T
Sbjct: 470 --WSKD-------DSSESVEGPRFAVHDNGSLEIYSVEKGDTGQYTCLAKNTEGSSAIDT 520
Query: 173 TVIVEGPPGL---PGGVQVV--EVHKTSATIQWTDGATNGRPITHYK----IIARTNWNS 223
+ V+ P + P +Q++ + S ++ + N + K I NS
Sbjct: 521 MLYVKDPTRIVVPPEHLQILIGTTAQLSCLAEYDESFKNDIELLWEKDDMEIALNYTENS 580
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+F + V + + V T +I EL Y + + +
Sbjct: 581 RYFVEDGILQIINVSHWDQGVYTCVARTPVDQDTASAWLIVLGELTYQQYFCSQAKGSDT 640
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI---YYKIFWRKKNDTEFQSETL 340
+ P AP + K + + W P + Y + W N E L
Sbjct: 641 PNVP-DAPEYLVLSERKSKSVKLKWNPGDNHNSSTTEFIIEYEESQWEPGN----WKELL 695
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS-AEDMPQVAPQGVFS 399
+ GN AV+++ +Y +V +N VG GP SE + P P+ +
Sbjct: 696 RVPGNHNSAVLKLHGN---VDYCFRVSGVNSVGRGPSSEPTERYKPPAAAPDKNPENIKI 752
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +++ W P+ I N G + +++ Y ++D E+ + + R + +V
Sbjct: 753 EGHLAHEMDINWEPLLPIEHN--GPGLEYKVSYRRQDLEEDWQEHMVKRHS----FVVKN 806
Query: 460 QPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P Y +K+ A NN G GP+ + + P P V ++ +N + V V+W V
Sbjct: 807 TPTFVPYEIKIQAKNNQGWGPDPKIVTGYSGEDFPSAAPDDVAVEVMNSSVVKVSWTRVH 866
Query: 519 PSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W VD S + + + G+ A + L+P Y + V+
Sbjct: 867 KDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHTLTIPGDRNHAAVPGLTPFSEYSLIVMT 926
Query: 574 FSNGGDGRMSSPAITFQMGE 593
F+ G+G S P + F+ E
Sbjct: 927 FNGRGNGPGSHP-VNFKTPE 945
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 11/154 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNV 65
++ + C E P P+ W K G+ + + K+ +G LLI P V ++DSG Y C A N
Sbjct: 271 DLKLECIAEGFPTPQVEWVKVGHRLPI--KAKLENHGKLLIVPRVEQEDSGKYMCKAKNA 328
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G + + P + + ++++ ++ ++CSA + W NGV
Sbjct: 329 LGEAVHYFTVTIEEPPEWVSEPESQLSMIG-SDVLIKCSASGTPQPTIT--WRVNGV--- 382
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
L E N + G + + NA +D+ Y+C
Sbjct: 383 --PLQEAPAANRKVLGDTILLRNAKASDSAVYQC 414
>gi|317418903|emb|CBN80941.1| Neurofascin, partial [Dicentrarchus labrax]
Length = 1241
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 237/539 (43%), Gaps = 56/539 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E + C +P P+ W K+G G GG+ +++ NG L I +D G Y+C A
Sbjct: 369 ENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQYRVYINGTLEIKRARAEDEGTYTCLA 428
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
++ G E++ RL V P+ + P + + C ++ L + WT +
Sbjct: 429 NSILGSAENQVRLEVKE-PTRIVRAPEHQSAIRGSTARFNCKVKSDPTLPITVTWTKDDK 487
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
+ NM + D L I N + D G Y C VKS + + S + V L
Sbjct: 488 PL-NMGWR------LRKDEESLTIPNVNEGDEGTYSCTVKSEIDQDSASARLTVLEEASL 540
Query: 183 PGGVQ---------------VVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WN-STW 225
V + + S + W G + P+T + + N W W
Sbjct: 541 NPSVSSALPPDRPDPPIDLDLSDPAARSIRLTWIPGNDHRSPVTQFLVQFEENRWEPGRW 600
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
N+S Y G + I L P+ Y+F+VIA N +G +PS PS +Y T
Sbjct: 601 QNLST---------YPGDLNSVILQ-LAPFVNYQFRVIAINSVGQSKPSRPSLRYKTSGA 650
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
P P + G G K ++ ISWEPL ++N PN+ Y ++WR+K E +E+ N
Sbjct: 651 APDAIPKGLRGWGSKKDNMEISWEPLLDLERNGPNLRYNVWWRRK-------ELEEEWNN 703
Query: 346 VGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + Y YE+K+QA+N+ GPGPES VVT +S ED P AP + +
Sbjct: 704 VTTMESKYVVQNTETYVPYEIKIQAMNEFGPGPESNVVTGYSGEDKPTDAPTDLQMSKVD 763
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW--------AL 455
T ++ W P++L +++G +R+ YW+E + V + T+ + +
Sbjct: 764 DTTAHIHWKPVDL--NSVQGEFKEYRLYYWRESSLVPGLVVSKEKKTKGFYSTVAGPSGI 821
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ L P +KY + ++ NN EGP S +E T ++ P I + T+H+ W
Sbjct: 822 LSDLVPYSKYKMFMVVANNRFEGPPSNT-VEFTTKEGVPDAPRFFRINRRSFDTIHLQW 879
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 12/180 (6%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ Y+ +V AIN VG P + ++ P P+G+ G + ++W P+ +
Sbjct: 620 FVNYQFRVIAINSVGQSKPSRPSLRYKTSGAAPDAIPKGLRGWGSKKDNMEISWEPLLDL 679
Query: 418 RENIRGRLIGHRIKY---WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
N G ++Y W+ EE + T + ++ + Y +K+ A N
Sbjct: 680 ERN------GPNLRYNVWWRRKELEEE--WNNVTTMESKYVVQNTETYVPYEIKIQAMNE 731
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GPES + P P+ + + ++ TT H+ W+ V + + Y++ W
Sbjct: 732 FGPGPESNVVTGYSGEDKPTDAPTDLQMSKVDDTTAHIHWKPVDLNSVQGEFKEYRLYYW 791
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 62
N + C PKP W +G + S R+++ ++ V S +Y C A
Sbjct: 278 NGRLVCRANGNPKPNIQWLINGQPVESSPPNPSRQEL--GDTIIFRSVQMGSSAVYQCNA 335
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI------ 116
+N HG + + VL +PP+ + +N ++ + LD +
Sbjct: 336 SNQHGYLLANAFVSVL-------DMPPR--MLGPKNQLIKVIENNRTFLDCPFFGSPLPE 386
Query: 117 --WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W NG G +D + IN G LEI A D G Y C+ S +G + +
Sbjct: 387 LRWFKNGQGSG-LDGGQYRV-YIN---GTLEIKRARAEDEGTYTCLANSILGSAENQVRL 441
Query: 175 IVEGP 179
V+ P
Sbjct: 442 EVKEP 446
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 16/185 (8%)
Query: 17 APKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGR 74
+P P W K G + + R+ FEN N L I VS +D+G Y C A N G
Sbjct: 198 SPTPTVKWFKKGGDLPA--RKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIF 255
Query: 75 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 134
+ V P Y+ P + +A N +L C A+ ++ W NG + + N
Sbjct: 256 VQVKAAP-YWLDKPTNLVLAPDENGRLVCRANGNPKPNIQ--WLINGQPVESSPPN---- 308
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLPGG----VQVV 189
P+ G + + + Y+C + G + V +++ PP + G ++V+
Sbjct: 309 PSRQELGDTIIFRSVQMGSSAVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVI 368
Query: 190 EVHKT 194
E ++T
Sbjct: 369 ENNRT 373
>gi|4467833|emb|CAB37831.1| cell adhesion molecule L1 [Homo sapiens]
Length = 824
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 86 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 145
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 146 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 203
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 204 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 258
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 259 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 312
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 313 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 364
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 365 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 419
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 420 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 479
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 480 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 537
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ V W+ P
Sbjct: 538 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLVRWQ--PPLSHN 593
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 594 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 650
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 143/623 (22%), Positives = 241/623 (38%), Gaps = 60/623 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C + P+P+ W+ +G + + + + + G L++S V D+ + C A N HG
Sbjct: 2 CQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEARNRHG-- 59
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLDVAYIWTHNG 121
L++ + Y QLP KI A ++ L C A + V ++ +G
Sbjct: 60 -----LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL-DEDG 113
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ +E P N G L I + D G Y C+ + ++ + V+
Sbjct: 114 TTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMANLKVKDATQ 167
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
+ G + + K + + +T A+ + W ++ E +G + D+Y
Sbjct: 168 ITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE--LG-DSDKYF 218
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
+ + L + +A EL E + +P P S +
Sbjct: 219 IEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLSDLHLL--TQ 276
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYT 360
+ +SW P E NAP Y I + K + +L K GN +++ Y
Sbjct: 277 SQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSP---YV 331
Query: 361 EYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y +V AIN GPG S V T+ + E P+ P V G +T + +TW P+ +
Sbjct: 332 HYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMDW 391
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVMAYNNAGEG 478
N +++Y + P+ T + + + L+V Y +KV A N+ G+G
Sbjct: 392 N------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKVQAVNSQGKG 445
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
PE + + + PQ P I+ +N + V V WR V + + + GY V W
Sbjct: 446 PEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGS 505
Query: 539 DMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
+ D ++ NT + L P YH+ V AF +GR S PA F
Sbjct: 506 QRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSGPASEFTFST 561
Query: 594 EKEFKSGSPALY--SASTTLLLV 614
+ AL+ S T LLV
Sbjct: 562 PEGVPGHPEALHLECQSNTSLLV 584
>gi|395838780|ref|XP_003792284.1| PREDICTED: neurofascin isoform 1 [Otolemur garnettii]
Length = 1347
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 245/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IG+
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGS 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQVTPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + N +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWSNATVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTEVKIRVMNSTAISL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA------LIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFSGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+ GY +R
Sbjct: 960 GILTGYTLR 968
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 136/641 (21%), Positives = 231/641 (36%), Gaps = 108/641 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--MSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 515 RLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSW---LKDDEPLYIGSRMK 571
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEPSS 275
+ + + T F V+E G YT ++ L + +V N L +
Sbjct: 572 KEDDSLTIFGVAERDQGS----YTCVASTELDQDLAKAYLTVLADQVTPTNRLA----AL 623
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 335
P + + P D + + S+ +P + N+P Y + + + +F
Sbjct: 624 PKGRPDRPRDLELT----------DLAERSVRLTWIPGDDNNSPITDYVVQFE---EDQF 670
Query: 336 QSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAED 388
Q ++ G+V AV+R+ Y Y+ +V AIN+VG P SE A
Sbjct: 671 QPGVWHDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP- 726
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
P+ P V G + +TW P+ G ++Y + ET + +
Sbjct: 727 -PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAWSNA 779
Query: 449 TTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507
T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+ +N
Sbjct: 780 TVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTEVKIRVMNS 839
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNTLDADI 558
T + + W V P + + Y+ W V Q +A + G+ L +
Sbjct: 840 TAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFS----GDRLRGVV 895
Query: 559 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
L P Y + ++ + GDG S E KEF +
Sbjct: 896 SRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|395860585|ref|XP_003802591.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Otolemur
garnettii]
Length = 1253
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 271/605 (44%), Gaps = 66/605 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 438 AVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K ++ GP S E+ ++T C A + L
Sbjct: 498 QAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--------CQASFDPSLQP 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL+EL ++ I+ G L I + ++D G Y C+ + + + +K
Sbjct: 550 SITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PGL +++ ++H ++ + W+ + PI Y I +A W S
Sbjct: 605 QLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGTRGIWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + + YE+KVQA+N G GPE +V +S ED PQ +P+ + N
Sbjct: 768 --VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W P++L + ++G L G+ + YW E + + + ++ + ++
Sbjct: 826 SSTVLVRWWPVDLAQ--VKGHLRGYSVTYWWERSQRKHSKRHVHKGHVIVPANTTSVILG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWR 515
GL+P + Y+++V A+N G GP LE T+ P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSSYHLEVKAFNGRGPGPA----LELTFSTPEGVPGHPEALHLECQSNTSLLLHWQ 939
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + GY + +D+ +P ++ +LSP RY ++ A +
Sbjct: 940 --PPLSHNGVLTGYVLSYHPLDEGGKEQLSFDLPDPELRTHNLTNLSPYLRYRFQLQATT 997
Query: 576 NGGDG 580
G G
Sbjct: 998 KEGPG 1002
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 243/634 (38%), Gaps = 65/634 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + ++ G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG +++ + Y QLP KI + + T LL A+
Sbjct: 405 EARNRHG-------VLLANAYIYVVQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVP 456
Query: 121 GVR-IGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVK------STVGKISTK- 171
V+ +G + L+ G L I + D G Y C + V + K
Sbjct: 457 SVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKD 516
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
T IV+GP + K + + +T A+ P I R + H
Sbjct: 517 ATRIVQGPRS--------AIEKKGSRVTFTCQASFD-PSLQPSITWRGDGGDL------H 561
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+G + D+Y + + L + +A EL E + +P P
Sbjct: 562 ELG-DSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKL 620
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAV 350
S + K + +SW P E NAP Y I + K + +L K GN A
Sbjct: 621 SDL--HLLKQSQVRLSWS--PAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSAT 676
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V AIN GPG P T+ + E P+ P V G + + +
Sbjct: 677 LKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVI 733
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVK 468
TW P+ I N +++Y + P+ T + + + L+V Y +K
Sbjct: 734 TWKPLRWIDWN------APQVQYRVQWRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYEIK 787
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A N+ G+GPE + + + PQ P I+ +N +TV V W V + + + G
Sbjct: 788 VQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRG 847
Query: 529 YKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
Y V W + + I+P NT + L P YH+ V AF +GR
Sbjct: 848 YSVTYWWERSQRKHSKRHVHKGHVIVP-ANTTSVILGGLRPYSSYHLEVKAF----NGRG 902
Query: 583 SSPAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA+ + AL+ ++T+LLL
Sbjct: 903 PGPALELTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|395860583|ref|XP_003802590.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Otolemur
garnettii]
Length = 1257
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 271/605 (44%), Gaps = 66/605 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 438 AVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K ++ GP S E+ ++T C A + L
Sbjct: 498 QAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--------CQASFDPSLQP 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL+EL ++ I+ G L I + ++D G Y C+ + + + +K
Sbjct: 550 SITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PGL +++ ++H ++ + W+ + PI Y I +A W S
Sbjct: 605 QLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGTRGIWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + + YE+KVQA+N G GPE +V +S ED PQ +P+ + N
Sbjct: 768 --VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W P++L + ++G L G+ + YW E + + + ++ + ++
Sbjct: 826 SSTVLVRWWPVDLAQ--VKGHLRGYSVTYWWERSQRKHSKRHVHKGHVIVPANTTSVILG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWR 515
GL+P + Y+++V A+N G GP LE T+ P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSSYHLEVKAFNGRGPGPA----LELTFSTPEGVPGHPEALHLECQSNTSLLLHWQ 939
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + GY + +D+ +P ++ +LSP RY ++ A +
Sbjct: 940 --PPLSHNGVLTGYVLSYHPLDEGGKEQLSFDLPDPELRTHNLTNLSPYLRYRFQLQATT 997
Query: 576 NGGDG 580
G G
Sbjct: 998 KEGPG 1002
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 243/634 (38%), Gaps = 65/634 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + ++ G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG +++ + Y QLP KI + + T LL A+
Sbjct: 405 EARNRHG-------VLLANAYIYVVQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVP 456
Query: 121 GVR-IGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVK------STVGKISTK- 171
V+ +G + L+ G L I + D G Y C + V + K
Sbjct: 457 SVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKD 516
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
T IV+GP + K + + +T A+ P I R + H
Sbjct: 517 ATRIVQGPRS--------AIEKKGSRVTFTCQASFD-PSLQPSITWRGDGGDL------H 561
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+G + D+Y + + L + +A EL E + +P P
Sbjct: 562 ELG-DSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKL 620
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAV 350
S + K + +SW P E NAP Y I + K + +L K GN A
Sbjct: 621 SDL--HLLKQSQVRLSWS--PAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSAT 676
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V AIN GPG P T+ + E P+ P V G + + +
Sbjct: 677 LKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVI 733
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVK 468
TW P+ I N +++Y + P+ T + + + L+V Y +K
Sbjct: 734 TWKPLRWIDWN------APQVQYRVQWRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYEIK 787
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A N+ G+GPE + + + PQ P I+ +N +TV V W V + + + G
Sbjct: 788 VQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRG 847
Query: 529 YKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
Y V W + + I+P NT + L P YH+ V AF +GR
Sbjct: 848 YSVTYWWERSQRKHSKRHVHKGHVIVP-ANTTSVILGGLRPYSSYHLEVKAF----NGRG 902
Query: 583 SSPAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA+ + AL+ ++T+LLL
Sbjct: 903 PGPALELTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|112293279|ref|NP_032504.3| neural cell adhesion molecule L1 precursor [Mus musculus]
gi|34785231|gb|AAH56988.1| L1 cell adhesion molecule [Mus musculus]
Length = 1259
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/599 (25%), Positives = 271/599 (45%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFC 496
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ ++T C A + L
Sbjct: 497 QAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFT--------CQASFDPSLQA 548
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL E ++ I+ G L I + ++D G Y CV + + ++ ++
Sbjct: 549 SITWRGDG-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRA 603
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFN 227
++V G PG +++ + H ++ + W+ + PI Y I + WF+
Sbjct: 604 QLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFS 663
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+ + V G + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 664 LGK-VPGNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 713
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP I Y++ WR + + ET +E V
Sbjct: 714 EKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQG----KQETWREQ-TVS 768
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ +
Sbjct: 769 DPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTV 828
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQP 461
V W P++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P
Sbjct: 829 LVRWRPVDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRP 886
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+V+V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 887 YSSYHVEVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLS 942
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + V+ + + ++ +L+P +Y ++ A + G G
Sbjct: 943 HNGVLTGYLLSYHPVEGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPG 1001
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 139/598 (23%), Positives = 231/598 (38%), Gaps = 52/598 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPQGKQET---WREQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLKGYN 848
Query: 531 VRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + I+ NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
>gi|395860587|ref|XP_003802592.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Otolemur
garnettii]
Length = 1248
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 271/605 (44%), Gaps = 66/605 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 433 AVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K ++ GP S E+ ++T C A + L
Sbjct: 493 QAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--------CQASFDPSLQP 544
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL+EL ++ I+ G L I + ++D G Y C+ + + + +K
Sbjct: 545 SITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKA 599
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PGL +++ ++H ++ + W+ + PI Y I +A W S
Sbjct: 600 QLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 659
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 660 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 705
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 706 EAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGTRGIWQEQI--- 762
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + + YE+KVQA+N G GPE +V +S ED PQ +P+ + N
Sbjct: 763 --VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILN 820
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W P++L + ++G L G+ + YW E + + + ++ + ++
Sbjct: 821 SSTVLVRWWPVDLAQ--VKGHLRGYSVTYWWERSQRKHSKRHVHKGHVIVPANTTSVILG 878
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWR 515
GL+P + Y+++V A+N G GP LE T+ P P A+H++ + T++ + W+
Sbjct: 879 GLRPYSSYHLEVKAFNGRGPGPA----LELTFSTPEGVPGHPEALHLECQSNTSLLLHWQ 934
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + GY + +D+ +P ++ +LSP RY ++ A +
Sbjct: 935 --PPLSHNGVLTGYVLSYHPLDEGGKEQLSFDLPDPELRTHNLTNLSPYLRYRFQLQATT 992
Query: 576 NGGDG 580
G G
Sbjct: 993 KEGPG 997
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 243/634 (38%), Gaps = 65/634 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + ++ G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG +++ + Y QLP KI + + T LL A+
Sbjct: 400 EARNRHG-------VLLANAYIYVVQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVP 451
Query: 121 GVR-IGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVK------STVGKISTK- 171
V+ +G + L+ G L I + D G Y C + V + K
Sbjct: 452 SVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKD 511
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
T IV+GP + K + + +T A+ P I R + H
Sbjct: 512 ATRIVQGPRS--------AIEKKGSRVTFTCQASFD-PSLQPSITWRGDGGDL------H 556
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+G + D+Y + + L + +A EL E + +P P
Sbjct: 557 ELG-DSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKL 615
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAV 350
S + K + +SW P E NAP Y I + K + +L K GN A
Sbjct: 616 SDL--HLLKQSQVRLSWS--PAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSAT 671
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V AIN GPG P T+ + E P+ P V G + + +
Sbjct: 672 LKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVI 728
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVK 468
TW P+ I N +++Y + P+ T + + + L+V Y +K
Sbjct: 729 TWKPLRWIDWN------APQVQYRVQWRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYEIK 782
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A N+ G+GPE + + + PQ P I+ +N +TV V W V + + + G
Sbjct: 783 VQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRG 842
Query: 529 YKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
Y V W + + I+P NT + L P YH+ V AF +GR
Sbjct: 843 YSVTYWWERSQRKHSKRHVHKGHVIVP-ANTTSVILGGLRPYSSYHLEVKAF----NGRG 897
Query: 583 SSPAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA+ + AL+ ++T+LLL
Sbjct: 898 PGPALELTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|403306865|ref|XP_003943940.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1248
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 259/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + V ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + + R ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHVECQSNTSLRLHWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYRPLDEGGKVPLSFNLRDPELRAHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 235/605 (38%), Gaps = 58/605 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EAGNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ ++ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLQIKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P+ A S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ K + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--KQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITF 589
PA F
Sbjct: 905 PASEF 909
>gi|4557707|ref|NP_000416.1| neural cell adhesion molecule L1 isoform 1 precursor [Homo sapiens]
gi|1705571|sp|P32004.2|L1CAM_HUMAN RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
Precursor
gi|472989|emb|CAA82564.1| neural cell adhesion molecule L1 [Homo sapiens]
gi|3068548|gb|AAC14352.1| L1 cell adhesion molecule [Homo sapiens]
gi|116496991|gb|AAI26230.1| L1 cell adhesion molecule [Homo sapiens]
gi|119593194|gb|EAW72788.1| L1 cell adhesion molecule, isoform CRA_b [Homo sapiens]
gi|168270912|dbj|BAG10249.1| neural cell adhesion molecule L1 precursor [synthetic construct]
gi|187951475|gb|AAI36448.1| L1 cell adhesion molecule [Homo sapiens]
Length = 1257
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|119593195|gb|EAW72789.1| L1 cell adhesion molecule, isoform CRA_c [Homo sapiens]
Length = 1255
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLLTQ--SQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|197215678|gb|ACH53067.1| L1 cell adhesion molecule isoform 2 precursor (predicted) [Otolemur
garnettii]
Length = 1226
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 271/605 (44%), Gaps = 66/605 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 407 AVEGSTAYLLCKAFGAPVPSVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFC 466
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K ++ GP S E+ ++T C A + L
Sbjct: 467 QAANDQNNVTIVANLQVKDATRIVQGPRSAIEKKGSRVTFT--------CQASFDPSLQP 518
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL+EL ++ I+ G L I + ++D G Y C+ + + + +K
Sbjct: 519 SITWRGDG-----GDLHELGDSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKA 573
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PGL +++ ++H ++ + W+ + PI Y I +A W S
Sbjct: 574 QLLVVGSPGLVPQLKLSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 633
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 634 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 679
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 680 EAAPEKNPVDVKGEGNETNNMVITWKPLRWIDWNAPQVQYRVQWRPQGTRGIWQEQI--- 736
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + + YE+KVQA+N G GPE +V +S ED PQ +P+ + N
Sbjct: 737 --VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILN 794
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W P++L + ++G L G+ + YW E + + + ++ + ++
Sbjct: 795 SSTVLVRWWPVDLAQ--VKGHLRGYSVTYWWERSQRKHSKRHVHKGHVIVPANTTSVILG 852
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTTVHVTWR 515
GL+P + Y+++V A+N G GP LE T+ P P A+H++ + T++ + W+
Sbjct: 853 GLRPYSSYHLEVKAFNGRGPGPA----LELTFSTPEGVPGHPEALHLECQSNTSLLLHWQ 908
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + GY + +D+ +P ++ +LSP RY ++ A +
Sbjct: 909 --PPLSHNGVLTGYVLSYHPLDEGGKEQLSFDLPDPELRTHNLTNLSPYLRYRFQLQATT 966
Query: 576 NGGDG 580
G G
Sbjct: 967 KEGPG 971
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 243/634 (38%), Gaps = 65/634 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + ++ G L++S V D+ + C
Sbjct: 314 GPGETARLDCQVQGRPQPEVTWRINGIPVEELPKDQKYQIQRGALILSNVQPSDTMVTQC 373
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG +++ + Y QLP KI + + T LL A+
Sbjct: 374 EARNRHG-------VLLANAYIYVVQLPAKI-LTGDNQTYMAVEGSTAYLLCKAFGAPVP 425
Query: 121 GVR-IGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVK------STVGKISTK- 171
V+ +G + L+ G L I + D G Y C + V + K
Sbjct: 426 SVQWLGEEGMTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTIVANLQVKD 485
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
T IV+GP + K + + +T A+ P I R + H
Sbjct: 486 ATRIVQGPRS--------AIEKKGSRVTFTCQASFD-PSLQPSITWRGDGGDL------H 530
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+G + D+Y + + L + +A EL E + +P P
Sbjct: 531 ELG-DSDKYFIEDGRLVIHSLDYSDQGNYSCLASTELDMVESKAQLLVVGSPGLVPQLKL 589
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAV 350
S + K + +SW P E NAP Y I + K + +L K GN A
Sbjct: 590 SDL--HLLKQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSAT 645
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+++ Y Y +V AIN GPG P T+ + E P+ P V G + + +
Sbjct: 646 LKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVI 702
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVK 468
TW P+ I N +++Y + P+ T + + + L+V Y +K
Sbjct: 703 TWKPLRWIDWN------APQVQYRVQWRPQGTRGIWQEQIVSDPFLVVSNTSTFVPYEIK 756
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A N+ G+GPE + + + PQ P I+ +N +TV V W V + + + G
Sbjct: 757 VQAVNSQGKGPEPQVTIGYSGEDYPQASPELEGIQILNSSTVLVRWWPVDLAQVKGHLRG 816
Query: 529 YKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
Y V W + + I+P NT + L P YH+ V AF +GR
Sbjct: 817 YSVTYWWERSQRKHSKRHVHKGHVIVP-ANTTSVILGGLRPYSSYHLEVKAF----NGRG 871
Query: 583 SSPAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA+ + AL+ ++T+LLL
Sbjct: 872 PGPALELTFSTPEGVPGHPEALHLECQSNTSLLL 905
>gi|158260531|dbj|BAF82443.1| unnamed protein product [Homo sapiens]
Length = 1257
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|403306869|ref|XP_003943942.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1243
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 259/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 493 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 548
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + V ++H ++ + W+ + PI Y I +A W S
Sbjct: 604 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 710 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAV 824
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + + R ++ GL+P
Sbjct: 825 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRP 882
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 883 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHVECQSNTSLRLHWQ--PPLS 938
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 939 HNGVLTGYVLSYRPLDEGGKVPLSFNLRDPELRAHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 235/605 (38%), Gaps = 58/605 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EAGNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ ++ + G + + K + + +T A+ + W ++ E
Sbjct: 506 NLQIKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P+ A S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ K + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--KQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 844 NVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 899
Query: 585 PAITF 589
PA F
Sbjct: 900 PASEF 904
>gi|403306867|ref|XP_003943941.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1252
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 259/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + V ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGSVPWLAVSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + + R ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHVECQSNTSLRLHWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYRPLDEGGKVPLSFNLRDPELRAHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 235/605 (38%), Gaps = 58/605 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EAGNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ ++ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLQIKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P+ A S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGSVPWLAVS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ K + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--KQSQVRLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITF 589
PA F
Sbjct: 905 PASEF 909
>gi|345307130|ref|XP_001507406.2| PREDICTED: neurofascin [Ornithorhynchus anatinus]
Length = 1371
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 148/538 (27%), Positives = 253/538 (47%), Gaps = 64/538 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++FENG+L I+ ++D GIY+C ATN+ G
Sbjct: 645 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYRVFENGSLEITMTRKEDQGIYTCVATNILGK 702
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ Q+P ++L C + L ++ W + + IGN
Sbjct: 703 AENQVRLEV-KDPTRIVQVPEDQMAKKGATVRLECHVKHDPSLKLSIKWLKDNEPLYIGN 761
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---------VVKSTVGKISTKT----- 172
E E L I + D G Y C V K+ + ++T++
Sbjct: 762 RLKKEDEA---------LTILGVAERDEGLYACEASTELDRAVAKAYLTVLATQSVPTNR 812
Query: 173 -TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVS 229
V+ + P P +++ ++ + S + W G N PIT Y + + W N+S
Sbjct: 813 MAVLPKERPERPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDQFQPGRWHNLS 872
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+++G +++ L P+ Y+F+VIA NE+G PS PS +Y T P
Sbjct: 873 ---------KFSGSINSAVLK-LSPYVNYQFRVIAINEVGSSLPSLPSERYRTSGAPPEA 922
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGI 348
PS + G G + ++ ISW P+ + PN+ Y + WR+++ E + + T+K GN +
Sbjct: 923 NPSDVQGVGSRKNNMEISWTPMNATQAYGPNLRYIVKWRRRDTRESWSNATVK--GNRYV 980
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
V + P Y Y+++VQ+ ND G GP+ + + +S ED P+ P V R NSTA++
Sbjct: 981 -VWQTP---VYVPYDIRVQSENDFGKGPDPDTILGYSGEDYPKAPPTEVKVRVLNSTAVS 1036
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKED--------NPEETAVYYLSRTTRNWALIVGLQ 460
+ WN + + ++G+L +R +W+E +P++ + R ++ GL
Sbjct: 1037 LQWN--RVYPDTVQGQLKEYRAYFWRESSLLKHLRVSPKKQWTSFPGDRLR--GVVSGLY 1092
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P + Y ++++ N G+GP SE E T + P ++ N T+ + W + S
Sbjct: 1093 PYSNYQLEMVVVNGRGDGPRSE-VREFTTPEGVPSAPRNFRVRQPNLQTIILKWDHRS 1149
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 136/621 (21%), Positives = 233/621 (37%), Gaps = 91/621 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSC 60
GE G V C PKP W +G + S + ++ S +Y C
Sbjct: 544 GEDGRVV--CRANGNPKPTVQWLVNGEPLEAASPNPSREVAGDTVIFRDTQIGSSAVYQC 601
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
A+N HG + + VL +PP++ RN ++ LD +
Sbjct: 602 NASNEHGYLLANAFVSVL-------DVPPRMLFP--RNQLIKVIHLNRTRLDCPFFGSPI 652
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEIT D G Y CV + +GK +
Sbjct: 653 PTLRWFKNG-QGSNLDGGNYRV----FENGSLEITMTRKEDQGIYTCVATNILGKAENQV 707
Query: 173 TVIVEGPPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P + VQV E + K AT+ R H K + W +E
Sbjct: 708 RLEVKDPTRI---VQVPEDQMAKKGATV---------RLECHVKHDPSLKLSIKWLKDNE 755
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEP-------SSPSP 278
+ Y G + + L E + A EL ++ S
Sbjct: 756 PL-------YIGNRLKKEDEALTILGVAERDEGLYACEASTELDRAVAKAYLTVLATQSV 808
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
N A P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 809 PTNRMAVLPKERPER--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYIVQFEEDQFQ 864
Query: 334 EFQSETLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDM 389
+ L ++ G++ AV+++ Y Y+ +V AIN+VG P SE A
Sbjct: 865 PGRWHNLSKFSGSINSAVLKLSP---YVNYQFRVIAINEVGSSLPSLPSERYRTSGAP-- 919
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P+ P V G + ++W P+ + G + + +K+ + D E + + T
Sbjct: 920 PEANPSDVQGVGSRKNNMEISWTPMNATQ--AYGPNLRYIVKWRRRDTRES----WSNAT 973
Query: 450 TRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
+ +V P Y ++V + N+ G+GP+ + L + P+ PP+ V ++ +N T
Sbjct: 974 VKGNRYVVWQTPVYVPYDIRVQSENDFGKGPDPDTILGYSGEDYPKAPPTEVKVRVLNST 1033
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS------RANDTIIPVGNTLDADIVDLS 562
V + W V P + + Y+ W + + T P G+ L + L
Sbjct: 1034 AVSLQWNRVYPDTVQGQLKEYRAYFWRESSLLKHLRVSPKKQWTSFP-GDRLRGVVSGLY 1092
Query: 563 PGKRYHMRVLAFSNGGDGRMS 583
P Y + ++ + GDG S
Sbjct: 1093 PYSNYQLEMVVVNGRGDGPRS 1113
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + +G + FEN N L I VS +DSG Y C A
Sbjct: 454 GTDLLLECIASGVPAPDIAWHKKGGDLPAGKVK--FENFNKALRIINVSEEDSGEYFCLA 511
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + ++ C A+ V W NG
Sbjct: 512 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRVVCRANGNPKPTVQ--WLVNGE 568
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 569 PLEAASPN----PSREVAGDTVIFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPR 624
Query: 182 L 182
+
Sbjct: 625 M 625
>gi|148697923|gb|EDL29870.1| L1 cell adhesion molecule [Mus musculus]
Length = 1255
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 152/592 (25%), Positives = 265/592 (44%), Gaps = 40/592 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 432 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFC 491
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V + Q P + C A + L + W +
Sbjct: 492 QAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQASFDPSLQASITWRGD 550
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 551 G-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 605
Query: 180 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIG 234
PG +++ + H ++ + W+ + PI Y I + WF++ + V G
Sbjct: 606 PGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPG 664
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ S L P+ Y F+V A N+ G GEPS S TP P + P +
Sbjct: 665 NQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV 715
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
G G + ++ I+W+PL NAP I Y++ WR + + ET +E V + +
Sbjct: 716 RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQG----KQETWREQ-TVSDPFLVVS 770
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P+
Sbjct: 771 NTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPV 830
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVK 468
+L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V+
Sbjct: 831 DLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVE 888
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP SE + T P P A+H++ + T++ + W+ P + G
Sbjct: 889 VQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLTG 944
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
Y + V+ + + ++ +L+P +Y ++ A + G G
Sbjct: 945 YLLSYHPVEGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPG 996
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 140/598 (23%), Positives = 230/598 (38%), Gaps = 52/598 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + E G+L++S V D+ + C
Sbjct: 339 GPGETARLDCQVQGRPQPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQC 398
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 399 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 445
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 446 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 505
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 506 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 557
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 558 -GDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 615
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR 352
K + +SW P E N+P Y I F K+ E K GN ++
Sbjct: 616 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 672
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 673 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 729
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 730 KPLRWMDWN--APQIQYRVQ-WRPQGKQET---WREQTVSDPFLVVSNTSTFVPYEIKVQ 783
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 784 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLKGYN 843
Query: 531 VRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + I+ NT A + L P YH+ V AF+ G G S
Sbjct: 844 VTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 901
>gi|35010|emb|CAA42508.1| Neural cell adhesion molecule L1 [Homo sapiens]
Length = 1257
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLVTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 145/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C E P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVEGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLV--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|221316760|ref|NP_001137435.1| neural cell adhesion molecule L1 isoform 3 precursor [Homo sapiens]
gi|119593193|gb|EAW72787.1| L1 cell adhesion molecule, isoform CRA_a [Homo sapiens]
Length = 1248
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 493 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 550
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 551 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 605
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 606 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 659
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 660 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 711
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 712 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 766
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 767 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 826
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 827 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 884
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 885 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 940
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 941 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 506 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 844 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 899
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 900 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|431839377|gb|ELK01303.1| Neuronal cell adhesion molecule [Pteropus alecto]
Length = 1210
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 164/597 (27%), Positives = 251/597 (42%), Gaps = 62/597 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPLPTIEWFKGAK--GSALREDIYVLHENGTLEIPVAQKDSTGSYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ RL + P+ + P + + C + L W + + N
Sbjct: 528 AKNEVRLEI-KDPTRIIKQPEYAIVQRGSTVSFECRVKHDHTLIPTVTWLKDNGELPN-- 584
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+D L I + S D G Y CV +T+ +S + V P P +++
Sbjct: 585 -----DGRFTVDKDHLVIADVSDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLEL 639
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ S + WT G N PIT+ A W + +E V G + +
Sbjct: 640 TDQLDKSVQLSWTPGDDNNSPITNAMHEA-----GLWHHQTE-VPGTQT---------TA 684
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308
+ L P+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W
Sbjct: 685 QLKLSPYVNYSFRVMAENSLGRSLPSEVSEQYLTKAAEPDKNPTTVEGLGSEPDNLVITW 744
Query: 309 EPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +KVQ
Sbjct: 745 KPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIKVQ 799
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A+NDVG PE VV S ED+P VAP V NST V W+P
Sbjct: 800 ALNDVGFAPEPPVVMGHSGEDLPMVAPGNVHVNVVNSTLAEVRWDP-------------- 845
Query: 428 HRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
I YWK N + ++ + ++ ++ GL+P + Y + V N GEGP S
Sbjct: 846 --IYYWKAQNSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 903
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QD 539
+ T P P S +K +NPT +T + PS + Y ++ ++ +
Sbjct: 904 PDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHE 960
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
+ D IP N + +L+ RY + A ++ G G + + E KE
Sbjct: 961 LGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYLYAQTSAGSGSQITEEAVTTVNEGKE 1016
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 26/187 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G + C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 369 GEDG--ALICRANGIPKPRISWLLNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 426 CNASNEYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSP 476
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + + E + + G LEI A G Y CV ++ +G +
Sbjct: 477 LPTIEWFKGAKGSALR----EDIYVLHENGTLEIPVAQKDSTGSYTCVARNKLGMAKNEV 532
Query: 173 TVIVEGP 179
+ ++ P
Sbjct: 533 RLEIKDP 539
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGTLPINRTFYRNFQK-TLQIIQVSEADSGNYQCIAK 337
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 338 NALGAIYHTISVTVKAAP-YWIMAPQNLVLSPGEDGALICRANGIPKPRIS--WLLNGVP 394
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 395 IEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 447
>gi|302565106|ref|NP_001180609.1| neural cell adhesion molecule L1 precursor [Pan troglodytes]
Length = 1257
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|449280044|gb|EMC87436.1| Neurofascin [Columba livia]
Length = 1372
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 249/546 (45%), Gaps = 57/546 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N + GG K ENG+L ++ ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNTL-DGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKA 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDEAPLYIGNR 587
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------EG 178
E D GL I + D G+Y CV + + K K + V E
Sbjct: 588 MKKE--------DDGLT-IFGVAEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRSREL 638
Query: 179 P---PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
P P P +++ ++ + S + W G N PIT Y + + W N S
Sbjct: 639 PKERPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHS---- 694
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 -----RYPGSVNSAVLS-LSPYVNYQFRVIAVNDVGSSLPSVPSERYQTNGARPEINPTG 748
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 749 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDIRGSWYNETVKTARHV---VWN 805
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE + +S ED P+ AP V R NSTA+ +TW
Sbjct: 806 TP---IYVPYEIKVQAENDFGRAPEPDTFIGYSGEDYPKAAPTDVRIRVLNSTAVALTWT 862
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYY 466
+ L + I+G+L +R +W++ + + R RN ++ L P + Y
Sbjct: 863 RVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYK 920
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++++ N G+GP SE T P P + I+ N ++++ W + P +
Sbjct: 921 LEMVVTNGRGDGPRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVL 977
Query: 527 IGYKVR 532
GY +R
Sbjct: 978 TGYSLR 983
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 139/627 (22%), Positives = 232/627 (37%), Gaps = 106/627 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I + E I V RD S +Y
Sbjct: 369 GEDGR--LVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTI--VFRDTQIGSSAVY 424
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 425 QCNASNEHGYLLANAFVSVL-------DVPPRI--LAPRNQLIKVIQNNRTRLDCPFFGS 475
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG N L+ N + G LE+ A D G Y CV + +GK
Sbjct: 476 PIPTLRWFKNG------QGNTLDGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAE 529
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFN 227
+ + V+ P + G + V + S P H ++ TW
Sbjct: 530 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVKHDPTLKLTVTW-- 575
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNT 282
+ E Y G + ++ L + E + +A EL +
Sbjct: 576 -----LKDEAPLYIGNRMKKEDDGLTIFGVAEKDQGDYTCVASTELDKDLAKAYLTVLAI 630
Query: 283 PADK----PYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
PA++ P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 631 PANRSRELPKERPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYIVQFE---ED 683
Query: 334 EFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSA 386
FQ + G+V AV+ + Y Y+ +V A+NDVG P SE A
Sbjct: 684 RFQPGMWHNHSRYPGSVNSAVLSLSP---YVNYQFRVIAVNDVGSSLPSVPSERYQTNGA 740
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAV 443
P++ P GV G + +TW P+ + G ++Y W+ + +
Sbjct: 741 R--PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDIRGSWY 792
Query: 444 YYLSRTTRN--WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 501
+T R+ W + + Y +KV A N+ G PE + ++ + P+ P+ V
Sbjct: 793 NETVKTARHVVWNTPIYV----PYEIKVQAENDFGRAPEPDTFIGYSGEDYPKAAPTDVR 848
Query: 502 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDA 556
I+ +N T V +TW V + + Y+ W + S+ + G+
Sbjct: 849 IRVLNSTAVALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRG 908
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ L P Y + ++ + GDG S
Sbjct: 909 IVSRLFPYSNYKLEMVVTNGRGDGPRS 935
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ A W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNP--KPAIQWLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 396 EASPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 448
>gi|13435353|ref|NP_076493.1| neural cell adhesion molecule L1 isoform 2 precursor [Homo sapiens]
gi|347807|gb|AAA59476.1| cell adhesion molecule L1 [Homo sapiens]
Length = 1253
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|33354077|dbj|BAC81122.1| L1 cell adhesion molecule [Homo sapiens]
Length = 1255
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 496 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 553
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 554 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 608
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 662
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 663 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 714
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 769
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 770 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 829
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 830 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 887
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 943
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1000
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 343 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 403 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 455
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 456 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 509 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 560
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 561 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 619
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 620 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 675
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 676 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 732
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 733 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 786
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 787 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 846
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 847 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 902
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 903 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 934
>gi|397466242|ref|XP_003804874.1| PREDICTED: neural cell adhesion molecule L1 [Pan paniscus]
Length = 1257
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGSGPTSE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 143/632 (22%), Positives = 245/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
P F + AL+ ++T+LLL
Sbjct: 905 PTSEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|190336629|gb|AAI62464.1| Neural adhesion molecule L1.2 [Danio rerio]
Length = 1271
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 267/589 (45%), Gaps = 38/589 (6%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
EG + C +P+P W+ + + + R +G+L IS S +DSG Y+CT
Sbjct: 453 AEGQTTELACETFGSPRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCT 512
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHN 120
N L VL+ + + P + I + L C + D+ + W N
Sbjct: 513 VNNSKIT--ITAELDVLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKN 569
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ ++ ID L I D G Y C V +T+ ++ + P
Sbjct: 570 MQKLTESS----DSDKYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKASGSITIVDRP 625
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +Q+ E + T+ WT GA + P+ Y I + T + E +E+ R
Sbjct: 626 DPPSLIQMTEPKERRVTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRV 678
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+G + + L P+ +Y F+VI+ NE+G +PS + Y+TPA P P + +
Sbjct: 679 SGSSQRATLP-LKPFISYRFRVISINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDE 737
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G L I+W+ + R N P+ +YK+ WRK + T K+ + V + + ++
Sbjct: 738 PGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FS 793
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+++KVQA+N++G GPE + + +S ED P AP V NSTAI VTW + RE
Sbjct: 794 AFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAAVN--RET 851
Query: 421 IRGRLIGHRIKYWKEDNP-------EETAVYYLSRTTRNWALIVG-LQPDTKYYVKVMAY 472
+RGRL G++I Y P E + ++ + ++G LQP + Y + V +
Sbjct: 852 VRGRLQGYKI-YLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDLQPFSHYNLAVSVF 910
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N GEGP+SE L T P PPS++ + +P+ +T + P+ +IGY ++
Sbjct: 911 NYKGEGPQSESILFFTPEGVP-GPPSSLMLD--SPSETEMTVHWTPPNQPNGNLIGYILQ 967
Query: 533 VWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++D D S ++ + + T + L P RY + ++ G+G
Sbjct: 968 HQQLDNDASLMQ--VVKISDPTASHYKLKLDPHSRYRFYLRGYTAIGEG 1014
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 138/615 (22%), Positives = 251/615 (40%), Gaps = 80/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G V + C + PKP+ W +G ++ R+ ++G L + V D+ ++ C A
Sbjct: 361 GETVKLECKADGIPKPEVTWSINGILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
+ HG ++++ Y +LPP+I ++A + +L C +V
Sbjct: 421 ASKHGS-------VLINAYVYVIELPPQILTEDGLMYSVAEGQTTELACETFGSPRPNVT 473
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK--- 171
+ G + N + I + G L+I+NAS D+G+Y C V ++ I+ +
Sbjct: 474 WEGESWGALVANQRM-------IQLSDGSLQISNASLNDSGQYTCTVNNSKITITAELDV 526
Query: 172 --TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT---HYKIIARTNWNSTWF 226
TVIV+ P L IQ G+P T Y++ +R + +
Sbjct: 527 LNKTVIVKPPLAL--------------RIQ------RGKPATLTCEYQVDSRQDLPQVQW 566
Query: 227 --NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
N+ + + D+Y + +++P E + I E+ + + T
Sbjct: 567 RKNMQKLTESSDSDKYMIDEST----LIIPEVEEEDEGIYTCEVITTLDMAKASGSITIV 622
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEY 343
D+P PS I K +++SW P N+P + Y I F +D + E +
Sbjct: 623 DRP-DPPSLIQMTEPKERRVTLSW--TPGADHNSPVLEYLIEFEETGSDRKEWEELSRVS 679
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA-PQGVFSRGF 402
G+ A + + + Y +V +IN++G S V +S P + P+GV S
Sbjct: 680 GSSQRATLPLKP---FISYRFRVISINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSD 736
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW E+ R + G +++ + K + ++ T ++ +
Sbjct: 737 EPGTLVITWK--EMDRRSFNGPDFHYKVMWRKVLGSGPS--WHTKDITSPPFVVTDVGNF 792
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ + +KV A N GEGPE + + + P + P V + IN T + VTW V+
Sbjct: 793 SAFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAAVNRETV 852
Query: 523 EEPIIGYKVRVWEVD---QDMSRANDTIIPVGNTLDAD-----IVDLSPGKRYHMRVLAF 574
+ GYK+ + + Q + R T V T D++ + DL P Y++ V F
Sbjct: 853 RGRLQGYKIYLTYLGPKGQHLRREPKTTFVV--TTDSNEEKKVLGDLQPFSHYNLAVSVF 910
Query: 575 SNGGDGRMSSPAITF 589
+ G+G S + F
Sbjct: 911 NYKGEGPQSESILFF 925
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C + P P W + ++ K + L +S D G Y CTATN
Sbjct: 271 GQNLELECIVQGLPSPSIQWIRKDGVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATN 330
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
GM R+ V P Y+ + P A ++L C A +V W+ NG+ +
Sbjct: 331 PQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGETVKLECKADGIPKPEVT--WSINGILL 387
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
++D + P ++ G+L + N +D ++C S G + V ++E PP +
Sbjct: 388 SDIDPD----PRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQI 442
>gi|427796129|gb|JAA63516.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 808
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 258/572 (45%), Gaps = 32/572 (5%)
Query: 17 APKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76
AP+P+ W K+ + +GGR ++ ++G+L I + D G Y+C A+N G + G L
Sbjct: 5 APRPEVKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFGDASASGSLE 63
Query: 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN 136
V G + Q P +AA ++ RC+A + L++ W NG + E +
Sbjct: 64 V-KGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP----EADARM 118
Query: 137 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 196
+ L IT D+G Y CV ++ + + T+ V+ P P V++ + A
Sbjct: 119 VQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI-DCDGLMA 177
Query: 197 TIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPW 255
++W PI Y I T+++ TW + ++ + + + PW
Sbjct: 178 LVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------KFKVSMSPW 228
Query: 256 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315
+ Y F+V+A N++G PS S + TP D P++ P R+ G G + +L I+W P+P +
Sbjct: 229 ANYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIE 288
Query: 316 QNAPNIYYKIFWRKKN--DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
NAP +YK+ W++ + D + S ++++ P+ + Y +KV+A N G
Sbjct: 289 HNAPGFFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPT---FKPYRIKVEAHNRRG 345
Query: 374 PGPESEVVTI-FSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
+ I +S E++P APQ + ++ N TW+P+ E++RG G++I+
Sbjct: 346 QAHTAATEVIGYSGENVPLAAPQDFKLANVVDARTANFTWSPVS--PESVRGHFRGYKIQ 403
Query: 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
W D EE + A + +P ++ V V+ +N+ GP S+ T
Sbjct: 404 TWTPDEGEEKLREVVVPANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEG 463
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPV 550
P P ++ + T +++ W+ P + GY + EV + + PV
Sbjct: 464 VP-GPVASFEGIPMGSTGIYLLWK--RPLESNGVLTGYHIYYEEVRGTQLGPKMERQPPV 520
Query: 551 GNTLD--ADIVDLSPGKRYHMRVLAFSNGGDG 580
+ L+ A + L P +Y + + A + G G
Sbjct: 521 RDPLESRAKLAGLKPRTKYRITIHAATAQGQG 552
>gi|410335591|gb|JAA36742.1| L1 cell adhesion molecule [Pan troglodytes]
Length = 1248
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 710 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 824
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 825 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 882
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 883 YSSYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 938
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 939 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 506 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 844 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 899
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 900 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|33354079|dbj|BAC81123.1| L1 cell adhesion molecule [Pan troglodytes]
Length = 1255
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 496 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 551
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 552 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 607 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 662
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 663 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 712
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 713 EKNPMDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 767
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 768 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 827
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 828 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 885
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 886 YSSYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 941
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 942 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1000
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 343 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 403 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 455
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 456 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 509 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 560
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 561 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 619
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 620 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 675
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 676 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPMDVKGEGNETTNMVIT 732
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 733 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 786
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 787 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 846
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 847 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 902
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 903 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 934
>gi|297711417|ref|XP_002832333.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Pongo abelii]
Length = 1257
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 143/632 (22%), Positives = 245/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|395754608|ref|XP_003779805.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Pongo abelii]
Length = 1253
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 143/632 (22%), Positives = 245/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|387849148|ref|NP_001248708.1| L1 cell adhesion molecule precursor [Macaca mulatta]
gi|380812680|gb|AFE78214.1| neural cell adhesion molecule L1 isoform 1 precursor [Macaca mulatta]
Length = 1257
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 715 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 769
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 770 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 830 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 943
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 944 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 142/632 (22%), Positives = 244/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL--------QLRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
>gi|395754610|ref|XP_003779806.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Pongo
abelii]
Length = 1248
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 710 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 765 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 824
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 825 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 882
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 883 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 938
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 939 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 143/632 (22%), Positives = 245/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 506 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 844 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 899
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 900 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|33354081|dbj|BAC81124.1| L1 cell adhesion molecule [Pongo pygmaeus]
Length = 1255
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 436 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 495
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 496 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 551
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 552 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 606
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 607 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 662
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 663 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 712
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 713 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 767
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 768 DPFLMVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 827
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 828 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 885
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 886 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 941
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 942 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1000
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 143/632 (22%), Positives = 245/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 343 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 403 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 455
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 456 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 509 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 560
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 561 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 619
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 620 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 675
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 676 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 732
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 733 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLMVSNTSTFVPYEIKV 786
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 787 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 846
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 847 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 902
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 903 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 934
>gi|4732113|gb|AAD28610.1|AF129167_1 neural cell adhesion molecule L1 [Chlorocebus aethiops]
Length = 1248
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/600 (25%), Positives = 259/600 (43%), Gaps = 56/600 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLRANDTGRYLC 492
Query: 61 TATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
A N + IV H + Q P + C A + L +
Sbjct: 493 LAAN-----DQNNVTIVAHLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSIT 547
Query: 117 WTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W +G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++
Sbjct: 548 WRGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLL 602
Query: 176 VEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWF 226
V G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 603 VVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS--- 659
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 660 ------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAA 708
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
P + P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 709 PEKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----V 763
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A
Sbjct: 764 SDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSA 823
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+
Sbjct: 824 VLVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLR 881
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 882 PYSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPL 937
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 938 SHNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/632 (22%), Positives = 244/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLRANDTGRYLCLAANDQNNVTIVA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 506 HLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 844 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 899
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 900 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|281183300|ref|NP_001162516.1| neural cell adhesion molecule L1 [Papio anubis]
gi|160213446|gb|ABX10974.1| L1 cell adhesion molecule, isoform 1 (predicted) [Papio anubis]
Length = 1324
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 505 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 564
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 565 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 620
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 621 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 675
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 676 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 731
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 732 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 781
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 782 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 836
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 837 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 896
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 897 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 954
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 955 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 1010
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 1011 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1069
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 142/632 (22%), Positives = 244/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S D+ + C
Sbjct: 412 GPGETARLDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQC 471
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 472 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 524
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 525 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 577
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 578 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 629
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 630 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 688
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 689 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 744
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 745 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 801
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 802 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 855
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 856 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 915
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 916 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 971
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 972 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 1003
>gi|226133|prf||1411301A neural adhesion mol L1
Length = 1260
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 243/528 (46%), Gaps = 40/528 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V + Q P + C A + L + W +
Sbjct: 497 QAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQASFDPSLQASITWRGD 555
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 556 G-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 610
Query: 180 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIG 234
PG +++ + H ++ + W+ + PI Y I + WF++ + V G
Sbjct: 611 PGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPG 669
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ S L P+ Y F+V A N+ G GEPS S TP P + P +
Sbjct: 670 NQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV 720
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRI 353
G G + ++ I+W+PL NAP I Y++ WR + E ++ +T+ + VV
Sbjct: 721 RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWRKQTVSD----PFLVVSN 776
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
S F YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 777 TSTF--VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+V A+N G GP SE + T P P A+H++ + T++ + W+
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ 938
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 139/598 (23%), Positives = 231/598 (38%), Gaps = 52/598 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPQGKQET---WRKQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLKGYN 848
Query: 531 VRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + I+ NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
>gi|45383103|ref|NP_989869.1| protein sidekick-2 [Gallus gallus]
gi|23194256|gb|AAN15076.1| sidekick-2 [Gallus gallus]
Length = 2217
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 259/596 (43%), Gaps = 36/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 460 DGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYT 519
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + P ++ + C + +DV YIW
Sbjct: 520 CLATNSRGVDEASADLVVW-ARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEK 578
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P + +D G L I+ D G Y C V S G S + V
Sbjct: 579 DGAPLGTES-----GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQ 633
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V + K + + W P+ Y + N N+ W V + E
Sbjct: 634 LPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEISEN-NAPW-TVLLASVDPE 691
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R LVP +Y+F++ A N++G + S + + + P + P+ P +
Sbjct: 692 LTWVVVRG-------LVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIA 744
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P P QN Y I + +Q K N + + +
Sbjct: 745 SGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQ---FKNITNADVNNLLLED 801
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T YE++V A N G G S VT ++ + +P V P V + NST I TWNP
Sbjct: 802 LIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIRFTWNPPS 861
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAY 472
+ I G G+++ W+ ++ EE V + + + + +VGL+ T+Y V+ +
Sbjct: 862 --PQFINGINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKFTEYLTSVLCF 919
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT+ P P + I T++ V+W+ P + + GY++
Sbjct: 920 TTPGDGPRSPPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPLEKNGILTGYRIS 976
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
E ++ +R + V TL+ + L+ Y + V A ++ G G++SS I+
Sbjct: 977 WEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSSSTIS 1030
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 186/432 (43%), Gaps = 53/432 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1447 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1505
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1506 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1553
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 347
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1554 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1613
Query: 348 -IAVVRIPSEFYYTEYE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
+ V SE T+YE +++ N VG GP S +F E MP APQ
Sbjct: 1614 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPSPPQEVFVGEAMPTGAPQ 1673
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYYLSRTTRN 452
V + +T ++VTW P +N G + G++I +W+ E+A +L T
Sbjct: 1674 NVAVKAATATQLDVTWEPPPTESQN--GDIQGYKIHFWEAQRQNESARVKTLFLPETGVK 1731
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y+V + A+N AG+GP S RT + AP P ++ + T+V+V
Sbjct: 1732 LKNLTGY---TSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSA-PGSIRFSELTTTSVNV 1787
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W P + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1788 SWE--PPPLPNGILEGYRL-VYEPCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRF 1844
Query: 570 RVLA--FSNGGD 579
R+ A F+ G D
Sbjct: 1845 RIRAKTFAYGPD 1856
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 177/426 (41%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 937 EDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 995
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ SS + P + P AP+ +G
Sbjct: 996 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELP-GAPTNLG 1045
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W+ + QN + + + N+ + +S
Sbjct: 1046 ISNIGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQLANEPDARS----- 1100
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
+ +P+ YT Y +++ +N VG P S I + + P VAP V R
Sbjct: 1101 --------LEVPNLNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRT 1152
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ N +G+RI+Y + D V+ + I L+
Sbjct: 1153 ASETSLWLRWMPLLEQEYNGNPDSVGYRIRYLRSDGQGRAVVHVIHDRVEREYTIEDLEE 1212
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S L RT P PS V + + + + V W + +
Sbjct: 1213 WTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEAD 1272
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
I+GYKV E D + +RA + + A + L Y +RVLAF+ GDG
Sbjct: 1273 CNGLILGYKVMFKEKDSE-ARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDGV 1331
Query: 582 MSSPAI 587
S P I
Sbjct: 1332 PSRPPI 1337
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 37/461 (8%)
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 186
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1097 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1148
Query: 187 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1149 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1203
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1204 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1259
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1260 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRSA-QLTGLGKFMLY 1317
Query: 363 EVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
E++V A +G G P + + +D+P P G+ +T++ + W P I
Sbjct: 1318 EIRVLAFTRIGDGVPSRPPILERTLDDVPG-PPVGMLFPEVRTTSVRLIWQPPTAPNGII 1376
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
+ HR+ L +TR + GLQP+ Y + A G G +
Sbjct: 1377 LAYQLTHRLN---TTTANAAVSEVLGPSTRQYT-ATGLQPEATYLFSITAQTRKGWGEAA 1432
Query: 482 ERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1433 EALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGL--SPVRFYTVQTRELPSG 1490
Query: 540 MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
+ I + A +VD L P Y RV A ++ GD
Sbjct: 1491 EWALHPASI--SHNATAFVVDRLKPFTSYKFRVKATNDIGD 1529
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 136/350 (38%), Gaps = 28/350 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1640 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1698
Query: 318 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1699 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1752
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S VT + + P AP + +T++NV+W P L G L G+R+ Y
Sbjct: 1753 DGPRSTPVTARTQQAAPS-APGSIRFSELTTTSVNVSWEPPPLPN----GILEGYRLVYE 1807
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A A GP+ E +
Sbjct: 1808 PCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRFRIRAKTFA-YGPDVEANITTGPG 1866
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I + + + W P + PI Y + D+ + IP
Sbjct: 1867 EGAPGPPGEPFISRYG-SAITIHWTSGDPG--QGPITRYVIEARPSDEGLWDILIKDIPK 1923
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
T DI L G Y RV+A ++ G G S+P+ + + F
Sbjct: 1924 EVTSYTFSMDI--LKQGVSYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1971
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++I R ++ +G+L IS + DD+G++ C A N
Sbjct: 371 VAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNA 430
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 431 AGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-QKGERI- 486
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 487 -LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 537
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1878 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1936
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1937 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1971
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 137/633 (21%), Positives = 230/633 (36%), Gaps = 109/633 (17%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 172 GEAAVIRAPRIASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAV 231
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ +PP+ T +A + + C A+ L+
Sbjct: 232 NDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIK 291
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV I + I+ L I N + D+G YEC + S+V ++
Sbjct: 292 LHIIWKKDGVPISS---------GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVA 342
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + + + + W+ +
Sbjct: 343 EGAYLSVLEPPQF---VKEPERHITAEMEKVVAIPCQAKGVPPPDM--------AWYKDA 391
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT 282
+ +++ R+ + S++ + L+P T F+ A N G Y +S +P
Sbjct: 392 SLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNITR 451
Query: 283 -PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDTEF 335
P D S + G I + S P P I W+K +
Sbjct: 452 GPQD------STVIDGMSVILNCETSGAPRP-----------AITWQKGERILASGSVQL 494
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS---AEDMPQV 392
TL E G++ ++ + YT A N G S + +++ D PQ
Sbjct: 495 PRFTLLESGSLLVSPAHLTDAGTYT-----CLATNSRGVDEASADLVVWARTRITDPPQ- 548
Query: 393 APQGVFSRGFNSTAINVTWNP---IELIRENIRGRL---IGHRIKYWKEDNPEETAVYYL 446
Q V S + VT +P + I E L G R++ +ET ++
Sbjct: 549 -DQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTESGPRLRL------DETGTLHI 601
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG-I 505
S+T W+ +G Y KV++ G R R+ P P S V + +
Sbjct: 602 SQT---WSGDIG-----TYTCKVLS-----AGGNDSRSAHLRVRQLPHAPESPVAVLSPL 648
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 564
+++TW P P++ Y V E+ ++ + + V L +V L P
Sbjct: 649 EKRAINLTW--AKPFDGNSPLLRYLV---EISENNAPWTVLLASVDPELTWVVVRGLVPA 703
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+ Y R+ A ++ G + S + EE F
Sbjct: 704 RSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPF 736
>gi|115558|sp|P11627.1|L1CAM_MOUSE RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: CD_antigen=CD171; Flags:
Precursor
gi|53337|emb|CAA31368.1| unnamed protein product [Mus musculus]
Length = 1260
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 243/528 (46%), Gaps = 40/528 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V + Q P + C A + L + W +
Sbjct: 497 QAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQASFDPSLQASITWRGD 555
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 556 G-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 610
Query: 180 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIG 234
PG +++ + H ++ + W+ + PI Y I + WF++ + V G
Sbjct: 611 PGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPG 669
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ S L P+ Y F+V A N+ G GEPS S TP P + P +
Sbjct: 670 NQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDV 720
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRI 353
G G + ++ I+W+PL NAP I Y++ WR + E ++ +T+ + VV
Sbjct: 721 RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWRKQTVSD----PFLVVSN 776
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
S F YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 777 TSTF--VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+V A+N G GP SE + T P P A+H++ + T++ + W+
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ 938
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 231/598 (38%), Gaps = 52/598 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V ++ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPQGKQET---WRKQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLKGYN 848
Query: 531 VRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + I+ NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
>gi|90183174|sp|Q8AV57.2|SDK2_CHICK RecName: Full=Protein sidekick-2; Flags: Precursor
Length = 2177
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 259/596 (43%), Gaps = 36/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 420 DGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYT 479
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + P ++ + C + +DV YIW
Sbjct: 480 CLATNSRGVDEASADLVVW-ARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEK 538
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P + +D G L I+ D G Y C V S G S + V
Sbjct: 539 DGAPLGTES-----GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQ 593
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V + K + + W P+ Y + N N+ W V + E
Sbjct: 594 LPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEISEN-NAPW-TVLLASVDPE 651
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R LVP +Y+F++ A N++G + S + + + P + P+ P +
Sbjct: 652 LTWVVVRG-------LVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIA 704
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P P QN Y I + +Q K N + + +
Sbjct: 705 SGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQ---FKNITNADVNNLLLED 761
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T YE++V A N G G S VT ++ + +P V P V + NST I TWNP
Sbjct: 762 LIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIRFTWNPPS 821
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAY 472
+ I G G+++ W+ ++ EE V + + + + +VGL+ T+Y V+ +
Sbjct: 822 --PQFINGINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKFTEYLTSVLCF 879
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT+ P P + I T++ V+W+ P + + GY++
Sbjct: 880 TTPGDGPRSPPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPLEKNGILTGYRIS 936
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
E ++ +R + V TL+ + L+ Y + V A ++ G G++SS I+
Sbjct: 937 WEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSSSTIS 990
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 186/432 (43%), Gaps = 53/432 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1407 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1465
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1466 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1513
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 347
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1514 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1573
Query: 348 -IAVVRIPSEFYYTEYE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
+ V SE T+YE +++ N VG GP S +F E MP APQ
Sbjct: 1574 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPSPPQEVFVGEAMPTGAPQ 1633
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYYLSRTTRN 452
V + +T ++VTW P +N G + G++I +W+ E+A +L T
Sbjct: 1634 NVAVKAATATQLDVTWEPPPTESQN--GDIQGYKIHFWEAQRQNESARVKTLFLPETGVK 1691
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y+V + A+N AG+GP S RT + AP P ++ + T+V+V
Sbjct: 1692 LKNLTGY---TSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSA-PGSIRFSELTTTSVNV 1747
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W P + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1748 SWE--PPPLPNGILEGYRL-VYEPCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRF 1804
Query: 570 RVLA--FSNGGD 579
R+ A F+ G D
Sbjct: 1805 RIRAKTFAYGPD 1816
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 177/426 (41%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 897 EDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 955
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ SS + P + P AP+ +G
Sbjct: 956 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELP-GAPTNLG 1005
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W+ + QN + + + N+ + +S
Sbjct: 1006 ISNIGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQLANEPDARS----- 1060
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
+ +P+ YT Y +++ +N VG P S I + + P VAP V R
Sbjct: 1061 --------LEVPNLNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRT 1112
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ N +G+RI+Y + D V+ + I L+
Sbjct: 1113 ASETSLWLRWMPLLEQEYNGNPDSVGYRIRYLRSDGQGRAVVHVIHDRVEREYTIEDLEE 1172
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S L RT P PS V + + + + V W + +
Sbjct: 1173 WTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEAD 1232
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
I+GYKV E D + +RA + + A + L Y +RVLAF+ GDG
Sbjct: 1233 CNGLILGYKVMFKEKDSE-ARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDGV 1291
Query: 582 MSSPAI 587
S P I
Sbjct: 1292 PSRPPI 1297
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 37/461 (8%)
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 186
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1057 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1108
Query: 187 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1109 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1163
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1164 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1219
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1220 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRSA-QLTGLGKFMLY 1277
Query: 363 EVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
E++V A +G G P + + +D+P P G+ +T++ + W P I
Sbjct: 1278 EIRVLAFTRIGDGVPSRPPILERTLDDVPG-PPVGMLFPEVRTTSVRLIWQPPTAPNGII 1336
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
+ HR+ L +TR + GLQP+ Y + A G G +
Sbjct: 1337 LAYQLTHRLN---TTTANAAVSEVLGPSTRQYT-ATGLQPEATYLFSITAQTRKGWGEAA 1392
Query: 482 ERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1393 EALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGL--SPVRFYTVQTRELPSG 1450
Query: 540 MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
+ I + A +VD L P Y RV A ++ GD
Sbjct: 1451 EWALHPASI--SHNATAFVVDRLKPFTSYKFRVKATNDIGD 1489
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 136/350 (38%), Gaps = 28/350 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1600 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1658
Query: 318 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1659 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1712
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S VT + + P AP + +T++NV+W P L G L G+R+ Y
Sbjct: 1713 DGPRSTPVTARTQQAAPS-APGSIRFSELTTTSVNVSWEPPPLPN----GILEGYRLVYE 1767
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A A GP+ E +
Sbjct: 1768 PCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRFRIRAKTFA-YGPDVEANITTGPG 1826
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I + + + W P + PI Y + D+ + IP
Sbjct: 1827 EGAPGPPGEPFISRYG-SAITIHWTSGDPG--QGPITRYVIEARPSDEGLWDILIKDIPK 1883
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
T DI L G Y RV+A ++ G G S+P+ + + F
Sbjct: 1884 EVTSYTFSMDI--LKQGVSYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++I R ++ +G+L IS + DD+G++ C A N
Sbjct: 331 VAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNA 390
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 391 AGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-QKGERI- 446
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 447 -LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 497
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1838 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1896
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1897 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 137/633 (21%), Positives = 230/633 (36%), Gaps = 109/633 (17%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 132 GEAAVIRAPRIASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAV 191
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ +PP+ T +A + + C A+ L+
Sbjct: 192 NDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIK 251
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV I + I+ L I N + D+G YEC + S+V ++
Sbjct: 252 LHIIWKKDGVPISS---------GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVA 302
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + + + + W+ +
Sbjct: 303 EGAYLSVLEPPQF---VKEPERHITAEMEKVVAIPCQAKGVPPPDM--------AWYKDA 351
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT 282
+ +++ R+ + S++ + L+P T F+ A N G Y +S +P
Sbjct: 352 SLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNITR 411
Query: 283 -PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDTEF 335
P D S + G I + S P P I W+K +
Sbjct: 412 GPQD------STVIDGMSVILNCETSGAPRP-----------AITWQKGERILASGSVQL 454
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS---AEDMPQV 392
TL E G++ ++ + YT A N G S + +++ D PQ
Sbjct: 455 PRFTLLESGSLLVSPAHLTDAGTYT-----CLATNSRGVDEASADLVVWARTRITDPPQ- 508
Query: 393 APQGVFSRGFNSTAINVTWNP---IELIRENIRGRL---IGHRIKYWKEDNPEETAVYYL 446
Q V S + VT +P + I E L G R++ +ET ++
Sbjct: 509 -DQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTESGPRLRL------DETGTLHI 561
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG-I 505
S+T W+ +G Y KV++ G R R+ P P S V + +
Sbjct: 562 SQT---WSGDIG-----TYTCKVLS-----AGGNDSRSAHLRVRQLPHAPESPVAVLSPL 608
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 564
+++TW P P++ Y V E+ ++ + + V L +V L P
Sbjct: 609 EKRAINLTW--AKPFDGNSPLLRYLV---EISENNAPWTVLLASVDPELTWVVVRGLVPA 663
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+ Y R+ A ++ G + S + EE F
Sbjct: 664 RSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPF 696
>gi|384942430|gb|AFI34820.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
mulatta]
gi|387540646|gb|AFJ70950.1| neural cell adhesion molecule L1 isoform 3 precursor [Macaca
mulatta]
Length = 1248
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 261/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 492
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 493 LAAN----DQNNVTIVANLKVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLQPSITW 548
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 549 RGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLV 603
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 604 VGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS---- 659
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 710 EKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VS 764
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+
Sbjct: 765 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAV 824
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P
Sbjct: 825 LVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRP 882
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 883 YSSYHLEVQAFNGRGLGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLS 938
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 939 HNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 997
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/632 (22%), Positives = 244/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPMEELAKDQKYRIQRGALILSNAQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL--------QLRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYVAVQGSTAYLLCKAFGAPVPS 452
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 453 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIVA 505
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 506 NLKVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 557
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 558 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 616
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 617 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 672
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 673 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 729
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 730 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 784 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 843
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR
Sbjct: 844 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGLG 899
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 900 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 931
>gi|348517086|ref|XP_003446066.1| PREDICTED: neural cell adhesion molecule L1-like [Oreochromis
niloticus]
Length = 1548
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 277/624 (44%), Gaps = 82/624 (13%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKD--GNIIGSG---GRRKIFENGNLLISPVSRDDSGIY 58
+G +V + C +P+P+ W ++ G ++ R I NG L +S VS +DSG Y
Sbjct: 702 KGRDVALHCESFGSPRPRVTWDREDTGALLSDPLLYPRISILTNGTLKLSDVSHNDSGEY 761
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIW 117
C+ N + +K + + PS P + + + L C T+ L D +W
Sbjct: 762 ICSVQNTNISITAK---LDVFRPSEILTGPQAVRVVQGESAFLDCDVDTDPRLRDYQVVW 818
Query: 118 THNGVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+ GN L E + + L++T+ D+ EY C V + V + + ++
Sbjct: 819 -----KKGNRKLEETSVDDKYTFLKNNTLKVTDVQLNDSTEYSCEVITKVDNVIAQGSIT 873
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-----TWFNVSE 230
V P P G+ + S T+ W+ G ++ PIT + I AR +++ TW
Sbjct: 874 VVAKPDPPSGLTLSNAEGVSVTLSWSPGLSHNSPITEFIIQAREEYHTEERKWTW----- 928
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
+E+ + G +E L P+STY F+VIA NE+G S+PS ++TP P
Sbjct: 929 ----EELKKVPGDFN-HVELTLHPFSTYRFRVIAINEVGRSRHSNPSDHHSTPPAAPSIN 983
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
P+ + + G L I+W+ + + N + Y++ WR+ + + + G V
Sbjct: 984 PTGVRSNSAEPGTLIITWDEIDKRFHNGQDFQYEVLWREADGSNVNWNS----GRVRSPP 1039
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ + YT +E+KV+++N +G GP+ E S ED P+ AP GV + NST + V+
Sbjct: 1040 FIVNNTGTYTPFEIKVRSVNALGGGPDPEPEIGHSGEDKPEEAPTGVSTTVMNST-VRVS 1098
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT--------------------- 449
W E +RGRL+G+RI Y + E + L ++
Sbjct: 1099 WKEAE----RVRGRLLGYRIYYKRLGPKAERSRRSLRQSQHEEDRGERSKQSSETDEHSW 1154
Query: 450 -------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
++ A + GL+ ++Y + V A+N+ GE P+S + T P PP+++
Sbjct: 1155 QVEEVDHSKTSAEVTGLRLFSEYELMVTAFNSKGESPQSPPHRFHTPEGVP-GPPASLEF 1213
Query: 503 KGINPTTVHVTWRYVSPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIV-- 559
+ ++ ++W SP E ++ GY V+ Q + ++ + + N D +
Sbjct: 1214 ESPTEKSLILSW---SPPAETNGVLQGYIVQY----QQEVESKNSPVEILNVNDPKVKHI 1266
Query: 560 ---DLSPGKRYHMRVLAFSNGGDG 580
+L P Y +V+A + G G
Sbjct: 1267 TLDNLDPNSHYVFKVIARTKTGQG 1290
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 120/559 (21%), Positives = 210/559 (37%), Gaps = 73/559 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G +VT+ C P+ P PK WKK ++ + I + L ++ DD G Y C
Sbjct: 516 ALKGNSVTLECLPKGLPTPKVEWKKKDGVLADTTGQVINFDRWLHFDSITLDDDGEYECK 575
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A+N HG ++ + + Y+ + P + ++L C A + + + W NG
Sbjct: 576 ASNAHG-SITRSFTVTVEAAPYWVKEPQNLMYTPGETVRLDCQA--DGVPRPSITWRING 632
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ +D E P + GG L + + + D Y+C K+ G I T + +VE PP
Sbjct: 633 QLLTEVD----EEPRRTVTGGTLIMKDVNIGDTAVYQCEAKNGHGSILLNTYLYVVELPP 688
Query: 181 GL--PGGV-------QVVEVHKTS-----ATIQW---TDGATNGRPITHYKIIARTNWNS 223
+ P G + V +H S + W GA P+ + +I TN
Sbjct: 689 QILSPDGFIYNVTKGRDVALHCESFGSPRPRVTWDREDTGALLSDPLLYPRISILTNGTL 748
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+VS + G+ + S++N + T + V +E+ G PQ
Sbjct: 749 KLSDVSHNDSGEYI--------CSVQNTNISI-TAKLDVFRPSEILTG------PQ---- 789
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
R+ G D + +P R+ Y++ W+K N ++ +Y
Sbjct: 790 -------AVRVVQGESAFLDCDVDTDPRLRD--------YQVVWKKGNRKLEETSVDDKY 834
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ +++ E + I V +T+ + D P G+
Sbjct: 835 TFLKNNTLKVTDVQLNDSTEYSCEVITKVDNVIAQGSITVVAKPD----PPSGLTLSNAE 890
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP---EETAVYYLSRTTRNWALI-VGL 459
++ ++W+P I +I R +Y E+ EE L + ++ + + L
Sbjct: 891 GVSVTLSWSPGLSHNSPITEFIIQAREEYHTEERKWTWEE-----LKKVPGDFNHVELTL 945
Query: 460 QPDTKYYVKVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
P + Y +V+A N G S T AP P+ V P T+ +TW +
Sbjct: 946 HPFSTYRFRVIAINEVGRSRHSNPSDHHSTPPAAPSINPTGVRSNSAEPGTLIITWDEID 1005
Query: 519 PSFEEEPIIGYKVRVWEVD 537
F Y+V E D
Sbjct: 1006 KRFHNGQDFQYEVLWREAD 1024
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 136/349 (38%), Gaps = 52/349 (14%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313
++ +E KV + N LG G P P+ ++ DKP +AP+ + + +SW+ R
Sbjct: 1048 YTPFEIKVRSVNALGGG--PDPEPEIGHSGEDKPEEAPTGVSTTVMN-STVRVSWKEAER 1104
Query: 314 EKQN--APNIYYKIF----------WRKKNDTEFQSETLKEYGNVG--------IAVVRI 353
+ IYYK R+ E + E K+ + +
Sbjct: 1105 VRGRLLGYRIYYKRLGPKAERSRRSLRQSQHEEDRGERSKQSSETDEHSWQVEEVDHSKT 1164
Query: 354 PSEF----YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+E ++EYE+ V A N G P+S + E +P P + ++ +
Sbjct: 1165 SAEVTGLRLFSEYELMVTAFNSKGESPQSPPHRFHTPEGVPG-PPASLEFESPTEKSLIL 1223
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV--GLQPDTKYYV 467
+W+P G L G+ ++Y +E + + V L+ I L P++ Y
Sbjct: 1224 SWSPPA----ETNGVLQGYIVQYQQEVESKNSPVEILNVNDPKVKHITLDNLDPNSHYVF 1279
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW----RYVSPSFEE 523
KV+A G+GP R R +PP + + N T+V+++W R + F
Sbjct: 1280 KVIARTKTGQGPPITR---RGATLLDGEPPKNITVTSGN-TSVNLSWVPGERNRNHGFHI 1335
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ + WE + ++ G L PG +YH++V+
Sbjct: 1336 QYLKKSGGGGWEKSEQVNTTQGFYTLTG---------LQPGAQYHLKVV 1375
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 89/228 (39%), Gaps = 30/228 (13%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
+S YE V A N G P SP +++TP P P+ + L +SW P P E
Sbjct: 1174 FSEYELMVTAFNSKGES-PQSPPHRFHTPEGVP-GPPASLEFESPTEKSLILSWSP-PAE 1230
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT--------EYEVKV 366
Y ++Q E + V I V P + T Y KV
Sbjct: 1231 TNGVLQGYI---------VQYQQEVESKNSPVEILNVNDPKVKHITLDNLDPNSHYVFKV 1281
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
A G GP +T A + P+ + N T++N++W P E R R
Sbjct: 1282 IARTKTGQGPP---ITRRGATLLDGEPPKNITVTSGN-TSVNLSWVPGE------RNRNH 1331
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
G I+Y K+ TT+ + + GLQP +Y++KV+ N+
Sbjct: 1332 GFHIQYLKKSGGGGWEKSEQVNTTQGFYTLTGLQPGAQYHLKVVHGNS 1379
>gi|170649623|gb|ACB21210.1| L1 cell adhesion molecule isoform 1 precursor (predicted) [Callicebus
moloch]
Length = 1252
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/603 (25%), Positives = 260/603 (43%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K ++ GP S E+ ++T C A + L
Sbjct: 498 QAANDQNNVTIVANLQIKDATQIVQGPRSTIEKKGSRVTFT--------CQASFDPSLQP 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL EL ++ I+ G L I + ++D G Y CV + + + ++
Sbjct: 550 SITWRGDG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG + + ++H + + W+ + PI Y I +A W S
Sbjct: 605 QLLVVGSPGSVPRLALSDLHLLKQNQVHLSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVNVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + + YE+KVQA+N G GPE +V +S ED PQ P+ N
Sbjct: 768 --VSDPFLVVSNTSTFVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+A+ V W P++L + ++G L G+ + YW+E + + + + R ++
Sbjct: 826 SSAVLVKWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILS 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y ++V A+N G GP SE T P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSSYQLEVQAFNGRGLGPASELTF-NTPEGVPGH-PEALHVECQSNTSLRLHWQ-- 939
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D+ + ++ DLSP RY ++ A +
Sbjct: 940 PPLSHNGVLTGYVLSYRPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKE 999
Query: 578 GDG 580
G G
Sbjct: 1000 GPG 1002
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 143/616 (23%), Positives = 235/616 (38%), Gaps = 70/616 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEITWRINGIPVEELAKDQKYRIQRGALILSNAQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK------STVG 166
V ++ +G + +E P N G L I + D G Y C + V
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCQAANDQNNVTIVA 510
Query: 167 KISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225
+ K T IV+GP + K + + +T A+ + W
Sbjct: 511 NLQIKDATQIVQGPRST--------IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDG 557
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
++ E +G + D+Y + + L + +A EL E + +P
Sbjct: 558 RDLQE--LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGS 614
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYG 344
P A S + K + +SW P E NAP Y I + K + +L K G
Sbjct: 615 VPRLALSDLHLL--KQNQVHLSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPG 670
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFN 403
N +++ Y Y +V AIN GPG S V T+ + E P+ P V G
Sbjct: 671 NQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVNVKGEGNE 727
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPD 462
+T + +TW P+ + N +++Y + P+ T + + + L+V
Sbjct: 728 TTNMVITWKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTF 781
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N G+GPE + + + PQ P I+ +N + V V WR V +
Sbjct: 782 VPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLAQV 841
Query: 523 EEPIIGYKVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ + GY V W + D ++ NT + L P Y + V AF+
Sbjct: 842 KGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYQLEVQAFNGR 901
Query: 578 GDGRMSSPAITFQMGE 593
G G S +TF E
Sbjct: 902 GLGPASE--LTFNTPE 915
>gi|66393077|ref|NP_571436.1| neural cell adhesion molecule L1.2 precursor [Danio rerio]
gi|36143027|gb|AAQ85080.1| neural adhesion molecule L1.2 [Danio rerio]
Length = 1271
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/589 (26%), Positives = 266/589 (45%), Gaps = 38/589 (6%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
EG + C +P+P W+ + + + R +G+L IS S +DSG Y+CT
Sbjct: 453 AEGQTTELACETFGSPRPNVTWEGESWGALVANQRMIQLSDGSLQISNASLNDSGQYTCT 512
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHN 120
N L VL+ + + P + I + L C + D+ + W N
Sbjct: 513 VNNSKIT--ITAELDVLNK-TVIVKPPLALRIQRGKPATLTCEYQVDSRQDLPQVQWRKN 569
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ ++ ID L I D G Y C V +T+ ++ + P
Sbjct: 570 MQKLTESS----DSDKYMIDESTLIIPEVEEEDEGIYTCEVITTLDMAKASGSITIVDRP 625
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +Q+ E + T+ WT GA + P+ Y I + T + E +E+ R
Sbjct: 626 DPPSLIQMTEPKERRVTLSWTPGADHNSPVLEYLI----EFEETGSDRKEW---EELSRV 678
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+ + + L P+ +Y F+VIA NE+G +PS + Y+TPA P P + +
Sbjct: 679 SCSSQRATLP-LKPFISYRFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSDE 737
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G L I+W+ + R N P+ +YK+ WRK + T K+ + V + + ++
Sbjct: 738 PGTLVITWKEMDRRSFNGPDFHYKVMWRKVLGSGPSWHT-KDITSPPFVVTDVGN---FS 793
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+++KVQA+N++G GPE + + +S ED P AP V NSTAI VTW + RE
Sbjct: 794 AFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAAVN--RET 851
Query: 421 IRGRLIGHRIKYWKEDNP-------EETAVYYLSRTTRNWALIVG-LQPDTKYYVKVMAY 472
+RGRL G++I Y P E + ++ + ++G LQP + Y + V +
Sbjct: 852 VRGRLQGYKI-YLTYLGPKGQHLRREPKTTFVVTTDSNEEKKVLGDLQPFSHYNLAVSVF 910
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N GEGP+SE L T P PPS++ + +P+ +T + P+ +IGY ++
Sbjct: 911 NYKGEGPQSESILFFTPEGVP-GPPSSLMLD--SPSETEMTVHWTPPNQPNGNLIGYILQ 967
Query: 533 VWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++D D S ++ + + T + L P RY + ++ G+G
Sbjct: 968 HQQLDNDASLMQ--VVKISDPTASHYKLKLDPHSRYRFYLRGYTAIGEG 1014
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 138/615 (22%), Positives = 249/615 (40%), Gaps = 80/615 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G V + C + PKP+ W +G ++ R+ ++G L + V D+ ++ C A
Sbjct: 361 GETVKLECKADGIPKPEVTWSINGILLSDIDPDPRRSVKHGVLTLKNVELSDTAVFQCKA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
+ HG ++++ Y +LPP+I ++A + +L C +V
Sbjct: 421 ASKHGS-------VLINAYVYVIELPPQILTEDGLMYSVAEGQTTELACETFGSPRPNVT 473
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK--- 171
+ G + N + I + G L+I+NAS D+G+Y C V ++ I+ +
Sbjct: 474 WEGESWGALVANQRM-------IQLSDGSLQISNASLNDSGQYTCTVNNSKITITAELDV 526
Query: 172 --TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT---HYKIIARTNWNSTWF 226
TVIV+ P L IQ G+P T Y++ +R + +
Sbjct: 527 LNKTVIVKPPLAL--------------RIQ------RGKPATLTCEYQVDSRQDLPQVQW 566
Query: 227 --NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
N+ + + D+Y + +++P E + I E+ + + T
Sbjct: 567 RKNMQKLTESSDSDKYMIDEST----LIIPEVEEEDEGIYTCEVITTLDMAKASGSITIV 622
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
D+P PS I K +++SW P N+P + Y I + +T + +E
Sbjct: 623 DRP-DPPSLIQMTEPKERRVTLSW--TPGADHNSPVLEYLIEFE---ETGSDRKEWEELS 676
Query: 345 NVGIAVVRIPSEFY-YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA-PQGVFSRGF 402
V + R + Y +V AIN++G S V +S P + P+GV S
Sbjct: 677 RVSCSSQRATLPLKPFISYRFRVIAINEIGKSDPSMVTEAYSTPAAPPDSNPEGVRSDSD 736
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW E+ R + G +++ + K + ++ T ++ +
Sbjct: 737 EPGTLVITWK--EMDRRSFNGPDFHYKVMWRKVLGSGPS--WHTKDITSPPFVVTDVGNF 792
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+ + +KV A N GEGPE + + + P + P V + IN T + VTW V+
Sbjct: 793 SAFDIKVQAVNEMGEGPEPKSIIGYSGEDYPLEAPLDVGLILINSTAIKVTWAAVNRETV 852
Query: 523 EEPIIGYKVRVWEVD---QDMSRANDTIIPVGNTLDAD-----IVDLSPGKRYHMRVLAF 574
+ GYK+ + + Q + R T V T D++ + DL P Y++ V F
Sbjct: 853 RGRLQGYKIYLTYLGPKGQHLRREPKTTFVV--TTDSNEEKKVLGDLQPFSHYNLAVSVF 910
Query: 575 SNGGDGRMSSPAITF 589
+ G+G S + F
Sbjct: 911 NYKGEGPQSESILFF 925
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ + C + P P W + ++ K + L +S D G Y CTATN
Sbjct: 271 GQNLELECIVQGLPSPSIQWIRKDGVLSESRTTKDSNDRVLRFQNISETDGGEYQCTATN 330
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
GM R+ V P Y+ + P A ++L C A + + W+ NG+ +
Sbjct: 331 PQGMSTHTYRVTVEAAP-YWIKEPKSQLYAPGETVKLECKA--DGIPKPEVTWSINGILL 387
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
++D + P ++ G+L + N +D ++C S G + V ++E PP +
Sbjct: 388 SDIDPD----PRRSVKHGVLTLKNVELSDTAVFQCKAASKHGSVLINAYVYVIELPPQI 442
>gi|350529383|ref|NP_001129635.2| L1 cell adhesion molecule precursor [Xenopus laevis]
Length = 1246
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 228/516 (44%), Gaps = 30/516 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E NV++ C AP PK W +D N++ + NG L I+ V ++ GIY CT
Sbjct: 438 EKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCT 496
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WT 118
A+N G L V + + P + A + + +C+ + + I W
Sbjct: 497 ASNNQGNVNISAYLDVRNATKI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWK 553
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG+ I N+ I+ L I+N D G Y C+ +S + + ++V
Sbjct: 554 KNGLEINEDPDND----KYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVID 609
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P P +++ +TS T+ WT G N PI + I + E + E+
Sbjct: 610 LPESPSDLELSNAQETSITLTWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELT 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R G + N L P+ Y+F+VIA NE+G S+PS +Y TP P + P + G G
Sbjct: 663 RVDGDMVTTDLN-LSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEG 721
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
++ ISW+PL N P+ Y + WR+ +++ E + V +
Sbjct: 722 TVPENMKISWKPLKGIDWNGPDFKYLVKWRRLGKDDWREEVAES------PPVIVTETST 775
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+ VQ++ND+G E + + S ED P ++P+ V N +AI V W P++ +
Sbjct: 776 FEPYEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGLEAMNESAIKVAWLPVQ--K 833
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+ + G L G + Y + ALI GL+P + Y V+V N G G
Sbjct: 834 QGLNGHLKGFMVYYISHSSRHRQTKELRVHGNTTHALITGLKPFSNYSVEVAIMNGKGPG 893
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
SE + RT P PPS +H++ + T++ + W
Sbjct: 894 DRSESRMIRTDEGVP-SPPSFLHLERQSDTSLTLIW 928
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 122/606 (20%), Positives = 219/606 (36%), Gaps = 81/606 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYS 59
G ++ + C PKPK WK +G S ++ N G+L+++ + +D+ +
Sbjct: 345 GEDIILHCEVGGKPKPKVTWKING---ASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQ 401
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELL 111
C A N HG ++ + Y +LPP+I ++ N+ + C +
Sbjct: 402 CEARNKHGN-------LLANAFVYVVELPPQILTKNDEQYSVVEKTNVSMDCKTFGAPMP 454
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+ + R +L L+ + + +G L IT G Y C + G ++
Sbjct: 455 KIQWD------RDQEDNLLALDQFSFHTNG-TLTITGVVKEHEGIYWCTASNNQGNVNIS 507
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ V + K I P KII +W ++E
Sbjct: 508 AYLDVRNATKIISPPMEQRARKGGKAI--FQCTVEFDPKMSSKII---DWKKNGLEINED 562
Query: 232 VIGKE--VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+ ++ YT SI NV + +A +EL E ++ + P +
Sbjct: 563 PDNDKYFIEDYT----LSISNVQ-EGDQGMYTCLARSELDSVEQTAELVVIDLP-----E 612
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
+PS + + ++++W P + N+P + + + F+ E V
Sbjct: 613 SPSDLELSNAQETSITLTW--TPGNENNSPIEEFI---IEFEEDSFEPGVWHELTRVDGD 667
Query: 350 VVRIPSEFY-YTEYEVKVQAINDVGPG----PESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
+V Y Y+ +V A+N+VGP P T SA P P+ V G
Sbjct: 668 MVTTDLNLSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSA---PTKNPEEVKGEGTVP 724
Query: 405 TAINVTWNPIELIREN-------IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
+ ++W P++ I N ++ R +G W+E+ E V +T
Sbjct: 725 ENMKISWKPLKGIDWNGPDFKYLVKWRRLGK--DDWREEVAESPPVIVTETST------- 775
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
+P Y + V + N+ G E + + + P P V ++ +N + + V W V
Sbjct: 776 -FEP---YEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGLEAMNESAIKVAWLPV 831
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ G+ V + R + GNT A I L P Y + V +
Sbjct: 832 QKQGLNGHLKGFMV-YYISHSSRHRQTKELRVHGNTTHALITGLKPFSNYSVEVAIMNGK 890
Query: 578 GDGRMS 583
G G S
Sbjct: 891 GPGDRS 896
>gi|225637533|ref|NP_795904.3| neuronal cell adhesion molecule isoform 1 precursor [Mus musculus]
gi|38372441|sp|Q810U4.2|NRCAM_MOUSE RecName: Full=Neuronal cell adhesion molecule; Short=Nr-CAM; AltName:
Full=Neuronal surface protein Bravo; Short=mBravo;
AltName: Full=NgCAM-related cell adhesion molecule;
Short=Ng-CAM-related; Flags: Precursor
Length = 1256
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 255/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+ D L +++ D G Y C +T+ S + V P
Sbjct: 587 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYD 639
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 640 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE------ 693
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P + G
Sbjct: 694 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEG 749
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 750 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 806
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST V W+P+
Sbjct: 807 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP 864
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + T+ ++ GLQP + Y + V
Sbjct: 865 --PKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNV 922
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 923 RVVNGKGEGPASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 979
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 980 ILQYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEA 1038
Query: 587 IT 588
IT
Sbjct: 1039 IT 1040
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 126/611 (20%), Positives = 227/611 (37%), Gaps = 75/611 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 369 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 427
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 428 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 478
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 479 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 534
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWF 226
++ P ++++ + + + + + R + +I W N F
Sbjct: 535 EIKDP------TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERF 588
Query: 227 NVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYE--FKVIAGNELGYGEPSSPSPQYNTP 283
+ +H++ +V G N + ++ +V+A +P+P Y+ P
Sbjct: 589 STDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPT-------PTPAPIYDVP 641
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKE 342
P + + ++W P + N+P + I + +D +
Sbjct: 642 -----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEV 694
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFS 399
G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 695 SGTQTTAQLKLSP---YVNYSFRVMAENSIGRSMPSEASEQYLTKAAE--PDQNPMAVEG 749
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +TW P+ + N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 750 LGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGT 805
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Y +KV A N+ G PE + + P P V + +N T V W V P
Sbjct: 806 PTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVPP 865
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W+ Q S+ N I G + L P Y + V
Sbjct: 866 KSVRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVRV 924
Query: 574 FSNGGDGRMSS 584
+ G+G S+
Sbjct: 925 VNGKGEGPAST 935
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 337 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 394 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 447
>gi|354488859|ref|XP_003506583.1| PREDICTED: neural cell adhesion molecule L1-like [Cricetulus griseus]
Length = 1259
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 152/596 (25%), Positives = 264/596 (44%), Gaps = 48/596 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V E I R + C A + L + W +
Sbjct: 497 QAANDQNNVTILANLQVKEATQITEGPRSAIEKKGAR-VTFTCQASFDPSLQASITWRGD 555
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 556 G-----RDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 610
Query: 180 PGLPGGVQVVE---VHKTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 230
PG +++ + + ++ + W+ + PI Y I +A W S
Sbjct: 611 PGPVSHLELSDRYLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWYS------- 663
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 664 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKN 716
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
P + G G + ++ I+W+PL NAP + Y++ WR + + ET KE V
Sbjct: 717 PVDVRGEGNETNNMVITWKPLWWMDWNAPQVQYRVQWRPQG----KQETWKEQ-TVSDPF 771
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ + + + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V
Sbjct: 772 LVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVR 831
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTK 464
W P++L + ++G L G+ + +W + + + + ++ ++ A++ GL+P +
Sbjct: 832 WRPVDLAQ--VKGHLRGYNVTFWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSS 889
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y+V+V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 YHVEVGAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNG 945
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D + + ++ +L+P +Y ++ A + G G
Sbjct: 946 VLTGYLLSYHPLDGESKEQLFLNLSDPELRTHNLTNLNPNLQYRFQLQATTQQGPG 1001
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 142/613 (23%), Positives = 231/613 (37%), Gaps = 82/613 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W +G + + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEVTWSINGMSMEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKIS---- 169
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 170 ---TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ T I EGP + K A + +T A+ + A W
Sbjct: 511 LQVKEATQITEGPRS--------AIEKKGARVTFTCQASFDPSLQ-----ASITWRGDGR 557
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP-------SSPSPQ 279
++ E + D+Y + L + +A EL E SP P
Sbjct: 558 DLQER---GDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPV 614
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+ Y K + +SW P E N+P Y I + K + +
Sbjct: 615 SHLELSDRYLL---------KQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWYS 663
Query: 340 L-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGV 397
L K GN +++ Y Y +V AIN GPG S V T+ + E P+ P V
Sbjct: 664 LGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV 720
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
G + + +TW P+ + N + +R++ W+ +ET + +T + L+V
Sbjct: 721 RGEGNETNNMVITWKPLWWMDWN--APQVQYRVQ-WRPQGKQET---WKEQTVSDPFLVV 774
Query: 458 G-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
Y +KV A NN G+GPE + + + PQ P I N +TV V WR
Sbjct: 775 SNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 517 VSPSFEEEPIIGYKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
V + + + GY V W + + + ++P NT A + L P YH+
Sbjct: 835 VDLAQVKGHLRGYNVTFWWKGSQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVE 893
Query: 571 VLAFSNGGDGRMS 583
V AF+ G G S
Sbjct: 894 VGAFNGRGLGPAS 906
>gi|29466306|emb|CAD65848.1| NrCAM protein [Mus musculus]
gi|162318336|gb|AAI57008.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic construct]
gi|162319098|gb|AAI56236.1| Neuron-glia-CAM-related cell adhesion molecule [synthetic construct]
Length = 1251
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 255/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 465 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 522
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 523 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 581
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+ D L +++ D G Y C +T+ S + V P
Sbjct: 582 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYD 634
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 635 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE------ 688
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P + G
Sbjct: 689 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEG 744
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 745 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 801
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST V W+P+
Sbjct: 802 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP 859
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + T+ ++ GLQP + Y + V
Sbjct: 860 --PKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNV 917
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 918 RVVNGKGEGPASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 974
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 975 ILQYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEA 1033
Query: 587 IT 588
IT
Sbjct: 1034 IT 1035
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 126/611 (20%), Positives = 227/611 (37%), Gaps = 75/611 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 364 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 422
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 423 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 473
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 474 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 529
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWF 226
++ P ++++ + + + + + R + +I W N F
Sbjct: 530 EIKDP------TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERF 583
Query: 227 NVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYE--FKVIAGNELGYGEPSSPSPQYNTP 283
+ +H++ +V G N + ++ +V+A +P+P Y+ P
Sbjct: 584 STDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPT-------PTPAPIYDVP 636
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKE 342
P + + ++W P + N+P + I + +D +
Sbjct: 637 -----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEV 689
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFS 399
G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 690 SGTQTTAQLKLSP---YVNYSFRVMAENSIGRSMPSEASEQYLTKAAE--PDQNPMAVEG 744
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +TW P+ + N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 745 LGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGT 800
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Y +KV A N+ G PE + + P P V + +N T V W V P
Sbjct: 801 PTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVPP 860
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W+ Q S+ N I G + L P Y + V
Sbjct: 861 KSVRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVRV 919
Query: 574 FSNGGDGRMSS 584
+ G+G S+
Sbjct: 920 VNGKGEGPAST 930
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 274 GNVLSLECIAEGLPTPIIYWIKEDGMLPA--NRTFYRNFKKTLQITHVSEADSGNYQCIA 331
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 332 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 388
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 389 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 442
>gi|49119255|gb|AAH73282.1| L1cam-a protein [Xenopus laevis]
Length = 1225
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 228/516 (44%), Gaps = 30/516 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E NV++ C AP PK W +D N++ + NG L I+ V ++ GIY CT
Sbjct: 417 EKTNVSMDCKTFGAPMPKIQWDRDQEDNLLALD-QFSFHTNGTLTITGVVKEHEGIYWCT 475
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEELLDVAYI-WT 118
A+N G L V + + P + A + + +C+ + + I W
Sbjct: 476 ASNNQGNVNISAYLDVRNATKI---ISPPMEQRARKGGKAIFQCTVEFDPKMSSKIIDWK 532
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG+ I N+ I+ L I+N D G Y C+ +S + + ++V
Sbjct: 533 KNGLEINEDPDND----KYFIEDYTLSISNVQEGDQGMYTCLARSELDSVEQTAELVVID 588
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P P +++ +TS T+ WT G N PI + I + E + E+
Sbjct: 589 LPESPSDLELSNAQETSITLTWTPGNENNSPIEEFIIEFEED-------SFEPGVWHELT 641
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
R G + N L P+ Y+F+VIA NE+G S+PS +Y TP P + P + G G
Sbjct: 642 RVDGDMVTTDLN-LSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSAPTKNPEEVKGEG 700
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
++ ISW+PL N P+ Y + WR+ +++ E + V +
Sbjct: 701 TVPENMKISWKPLKGIDWNGPDFKYLVKWRRLGKDDWREEVAES------PPVIVTETST 754
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+ YE+ VQ++ND+G E + + S ED P ++P+ V N +AI V W P++ +
Sbjct: 755 FEPYEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGLEAMNESAIKVAWLPVQ--K 812
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+ + G L G + Y + ALI GL+P + Y V+V N G G
Sbjct: 813 QGLNGHLKGFMVYYISHSSRHRQTKELRVHGNTTHALITGLKPFSNYSVEVAIMNGKGPG 872
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
SE + RT P PPS +H++ + T++ + W
Sbjct: 873 DRSESRMIRTDEGVP-SPPSFLHLERQSDTSLTLIW 907
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 125/616 (20%), Positives = 226/616 (36%), Gaps = 101/616 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYS 59
G ++ + C PKPK WK +G S ++ N G+L+++ + +D+ +
Sbjct: 324 GEDIILHCEVGGKPKPKVTWKING---ASLKDSDLYHNWKLSEGSLVLNNMQLNDTSVVQ 380
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELL 111
C A N HG ++ + Y +LPP+I ++ N+ + C +
Sbjct: 381 CEARNKHGN-------LLANAFVYVVELPPQILTKNDEQYSVVEKTNVSMDCKTFGAPMP 433
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+ + R +L L+ + + +G L IT G Y C + G ++
Sbjct: 434 KIQWD------RDQEDNLLALDQFSFHTNG-TLTITGVVKEHEGIYWCTASNNQGNVNIS 486
Query: 172 TTVIVE------GPP----GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
+ V PP GG + + T+++ P KII +W
Sbjct: 487 AYLDVRNATKIISPPMEQRARKGGKAIFQ-----CTVEFD-------PKMSSKII---DW 531
Query: 222 NSTWFNVSEHVIGKE--VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
++E + ++ YT SI NV + +A +EL E ++
Sbjct: 532 KKNGLEINEDPDNDKYFIEDYT----LSISNVQ-EGDQGMYTCLARSELDSVEQTAELVV 586
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+ P ++PS + + ++++W P + N+P + + + F+
Sbjct: 587 IDLP-----ESPSDLELSNAQETSITLTW--TPGNENNSPIEEFI---IEFEEDSFEPGV 636
Query: 340 LKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVGPG----PESEVVTIFSAEDMPQVAP 394
E V +V Y Y+ +V A+N+VGP P T SA P P
Sbjct: 637 WHELTRVDGDMVTTDLNLSPYVNYQFRVIAVNEVGPSNGSNPSDRYRTPPSA---PTKNP 693
Query: 395 QGVFSRGFNSTAINVTWNPIELIREN-------IRGRLIGHRIKYWKEDNPEETAVYYLS 447
+ V G + ++W P++ I N ++ R +G W+E+ E V
Sbjct: 694 EEVKGEGTVPENMKISWKPLKGIDWNGPDFKYLVKWRRLGK--DDWREEVAESPPVIVTE 751
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507
+T +P Y + V + N+ G E + + + P P V ++ +N
Sbjct: 752 TST--------FEP---YEIIVQSVNDLGRASEPKPIIGHSGEDFPDISPENVGLEAMNE 800
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567
+ + V W V + G+ V + R + GNT A I L P Y
Sbjct: 801 SAIKVAWLPVQKQGLNGHLKGFMV-YYISHSSRHRQTKELRVHGNTTHALITGLKPFSNY 859
Query: 568 HMRVLAFSNGGDGRMS 583
+ V + G G S
Sbjct: 860 SVEVAIMNGKGPGDRS 875
>gi|348543836|ref|XP_003459388.1| PREDICTED: neurofascin-like [Oreochromis niloticus]
Length = 1342
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 238/539 (44%), Gaps = 70/539 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70
C +P P+ W K+G G GG+ +++ NG L I +D G Y+C A+++ G E
Sbjct: 453 CPFFGSPLPELRWFKNGQGSGLDGGQYRVYINGTLEIKRAQAEDEGTYTCVASSILGKAE 512
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN------GVRI 124
++ RL V P+ Q P + + C ++ L V+ W + G R+
Sbjct: 513 NQVRLEVKE-PTRIIQAPEHQSAIRGSTARFTCRVTSDPSLPVSVAWMKDDKPLYLGWRL 571
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST--KTTVIV------ 176
D L PN+N D G Y C VKS + ++S + TV+V
Sbjct: 572 KKDD-ESLSIPNVNE------------GDEGTYTCTVKSEIDQLSASARLTVLVCFCVSD 618
Query: 177 ---------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STW 225
P P + + + S + W G + PIT + + W W
Sbjct: 619 TSKAMSCLSSARPDPPIDLDLSDPAARSVRLTWIPGKDHRSPITEFLVQFEEDRWEPGRW 678
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
N+S Y G + I L P+ Y+F+VIA N +G +PS PSP+Y T
Sbjct: 679 QNLSS---------YPGDLNSVILQ-LAPFVNYQFRVIAINSVGQSDPSRPSPRYKTTGA 728
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
P P + G G + ++ I+WEPL ++N PN++Y ++WR+K+ E E+ N
Sbjct: 729 APDAIPKGLRGWGSRKDNMEITWEPLLDLERNGPNLHYIVWWRRKDVEE-------EWNN 781
Query: 346 VGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V + + + Y YE+K+QA N+ G GPES +V +S ED P AP + +
Sbjct: 782 VTTLGAKHVVHNTEIYVPYEIKIQARNEFGAGPESNMVIGYSGEDKPTDAPTDLRVSKVD 841
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY--------YLSRTTRNWAL 455
ST + + WNP++L +++G +R+ YW+E + V + S T + +
Sbjct: 842 STKVIIHWNPVDL--NSVQGEFKEYRLYYWRESSQVPGLVVIKDKKIKGFYSTTVKPSGM 899
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ L P + Y + ++ NN E S +E T ++ P I + T+H+ W
Sbjct: 900 LSDLVPYSNYKMFMVVANNRFESQPSNT-VEFTTKEGVPDAPRFFKINRRSLDTIHLEW 957
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 106/553 (19%), Positives = 202/553 (36%), Gaps = 68/553 (12%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+ C PKP W +G I S R++ + ++ V S +Y C A+N H
Sbjct: 357 LICRANGNPKPHIEWLVNGQPIESSPTNPNRQVLGD-TIIFRSVQIGSSAVYQCNASNEH 415
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WT 118
G + + VL LPP+ + +N ++ + LD + W
Sbjct: 416 GYLLANAFVNVL-------DLPPR--MLGPKNQLIKVIKNNRTFLDCPFFGSPLPELRWF 466
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT------ 172
NG G +D + IN G LEI A D G Y CV S +GK +
Sbjct: 467 KNGQGSG-LDGGQYRV-YIN---GTLEIKRAQAEDEGTYTCVASSILGKAENQVRLEVKE 521
Query: 173 -TVIVEGP---PGLPGGVQVVEVHKTS-----ATIQWTDGATNGRPITHYKIIARTNWNS 223
T I++ P + G TS ++ W + +P+ + + + +
Sbjct: 522 PTRIIQAPEHQSAIRGSTARFTCRVTSDPSLPVSVAW---MKDDKPLYLGWRLKKDDESL 578
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+ NV+E G YT ++ I+ + ++ S + + P
Sbjct: 579 SIPNVNEGDEGT----YTCTVKSEIDQLSASARLTVLVCFCVSDTSKAMSCLSSARPDPP 634
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
D P+ + ++W +P + +P + + + + + + L Y
Sbjct: 635 IDLDLSDPA--------ARSVRLTW--IPGKDHRSPITEFLVQFEEDRWEPGRWQNLSSY 684
Query: 344 -GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRG 401
G++ ++++ Y + + ++ P P T +A D +G SR
Sbjct: 685 PGDLNSVILQLAPFVNYQFRVIAINSVGQSDPSRPSPRYKTTGAAPDAIPKGLRGWGSRK 744
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
N + +TW P+ + N H I +W+ + EE + ++ ++ +
Sbjct: 745 DN---MEITWEPLLDLERNGPNL---HYIVWWRRKDVEEEWNNVTTLGAKH--VVHNTEI 796
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +K+ A N G GPES + + P P+ + + ++ T V + W V +
Sbjct: 797 YVPYEIKIQARNEFGAGPESNMVIGYSGEDKPTDAPTDLRVSKVDSTKVIIHWNPVDLNS 856
Query: 522 EEEPIIGYKVRVW 534
+ Y++ W
Sbjct: 857 VQGEFKEYRLYYW 869
>gi|344236690|gb|EGV92793.1| Neurofascin [Cricetulus griseus]
Length = 1279
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 219/474 (46%), Gaps = 52/474 (10%)
Query: 34 GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI 93
GG ++ENG+L I + ++D GIY+C ATN+ G E++ RL V P+ ++P +
Sbjct: 508 GGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEV-KDPTRIYRMPEDQVV 566
Query: 94 AAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASF 151
+QL C + L + W + + IGN E ++ L I +
Sbjct: 567 KRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDS---------LTIFGVAE 617
Query: 152 ADAGEYECVVKSTVGKISTKTTVIV---------------EGPPGLPGGVQVVEVHKTSA 196
D G Y C+ + + + K + V +G P P +++ ++ + S
Sbjct: 618 RDQGSYTCMASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSV 677
Query: 197 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256
+ W G N PIT Y I + F + + ++ G +++ + L P+
Sbjct: 678 RLTWIPGDDNNSPITDYVI----QFEEDQFQPG---VWHDHSKFPGSVNSAVLH-LSPYV 729
Query: 257 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 316
Y+F+VIA NE+G PS PS +Y T P PS + G G + ++ I+W P+
Sbjct: 730 NYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSA 789
Query: 317 NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGP 374
PN+ Y + WR++ ET + + NV + R + Y YE++VQA ND G
Sbjct: 790 FGPNLRYIVKWRRR-------ETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGK 842
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK 434
GPE + + +S ED P+ AP V R NSTAI++ WN + + ++G+L +R YW+
Sbjct: 843 GPEPDTIIGYSGEDYPRAAPTEVKIRVMNSTAISLQWN--RVYSDTVQGQLREYRAYYWR 900
Query: 435 EDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
E + + R R ++ L P + Y ++++ N G+GP SE
Sbjct: 901 ESSLLKNLWVSQKRQQASFPGDRPRGVVARLFPYSNYKLEMVVVNGRGDGPRSE 954
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 138/652 (21%), Positives = 240/652 (36%), Gaps = 117/652 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 371 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 428
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT-- 118
+N HG + + VL +PP++ + RN +R + LD + +
Sbjct: 429 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 479
Query: 119 -------------HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKST 164
+ VR N + L+ N ++ + G LEI D G Y CV +
Sbjct: 480 PTLRCPFSVCCVRCSIVRFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNI 539
Query: 165 VGKISTKTTVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRP 209
+GK + + V+ P G ++ H S T+ W + P
Sbjct: 540 LGKAENQVRLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWL---KDDEP 596
Query: 210 ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
+ + + + + T F V+E G YT ++ L + V+A
Sbjct: 597 LYIGNRMKKEDDSLTIFGVAERDQGS----YTCMASTELDQDL---AKAYLTVLA----- 644
Query: 270 YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYK 324
+ ++P+ N A P P R ++ DL+ ++W +P + N+P Y
Sbjct: 645 --DQATPT---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYV 695
Query: 325 IFWRKKNDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPE 377
I + + +FQ ++ G+V AV+ + Y Y+ +V A+N+VG P
Sbjct: 696 IQFE---EDQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLP 749
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437
SE A P+ P V G + +TW P+ G ++Y +
Sbjct: 750 SERYRTSGAP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWR 801
Query: 438 PEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496
ET + + T +VG P Y ++V A N+ G+GPE + + + P+
Sbjct: 802 RRETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAA 861
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTI 547
P+ V I+ +N T + + W V + + Y+ W V Q +A+
Sbjct: 862 PTEVKIRVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS--- 918
Query: 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
P G+ + L P Y + ++ + GDG S E KEF +
Sbjct: 919 FP-GDRPRGVVARLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 960
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 22/194 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSC 60
G+ I C E +P P W K G + S + FEN N L I+ VS +DSG Y C
Sbjct: 267 GKAAGPIICCASEPSPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFC 324
Query: 61 TATNVHGMDESKGR-----------LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
A+N G L L Y+ P + +A + +L C A+
Sbjct: 325 LASNKMGSIRHTISVRVKACAIYICLPCLSAAPYWLDEPKNLILAPGEDGRLVCRANGNP 384
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
V W NG + + N PN + G + + + Y+C + G +
Sbjct: 385 KPTVQ--WMVNGEPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL 438
Query: 170 TKTTV-IVEGPPGL 182
V +++ PP +
Sbjct: 439 ANAFVSVLDVPPRM 452
>gi|335306706|ref|XP_003135542.2| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Sus scrofa]
Length = 1257
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 265/603 (43%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K +L GP S E+ ++ C A+ + L
Sbjct: 498 QAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQAYFDSSLQH 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL EL ++ I+ G L I + ++D G Y CV + + + ++
Sbjct: 550 SITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG ++V + H ++ + W+ + PI Y I +A W S
Sbjct: 605 ELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ ++W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 768 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W L ++G L G+ + YW E + + + ++ + A++
Sbjct: 826 SSTVLVRWR--HLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y+++V A+N G GP S R T P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSTYHLEVQAFNGRGPGPASSRSFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 939
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D + +P ++ +LSP RY ++ A +
Sbjct: 940 PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 999
Query: 578 GDG 580
G G
Sbjct: 1000 GPG 1002
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 138/620 (22%), Positives = 238/620 (38%), Gaps = 86/620 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + +G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVK------STVGK 167
G + ++ + E + D TN + D G Y C + V
Sbjct: 452 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVAN 511
Query: 168 ISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ K T I++GP + K + + +T A + H W
Sbjct: 512 LQVKDATQILQGPRS--------AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQ 558
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS---------PS 277
++ E +G + D+Y + + + L + +A +L E + P
Sbjct: 559 DLRE--LG-DSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPV 615
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 337
PQ +D+ S++ +SW P + NAP Y I + K +
Sbjct: 616 PQLEV-SDQHLLRQSQV----------RLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKW 662
Query: 338 ETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQ 395
+L K GN A +++ Y Y +V AIN GPG P T+ + E P+ P
Sbjct: 663 YSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPV 719
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + + VTW P+ + N +++Y + P+ T + + + L
Sbjct: 720 DVKGEGNETNNMVVTWKPLRWMDWN------APQVQYRVQWRPQGTQGAWQEQIVSDPLL 773
Query: 456 IVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+V Y +KV A N+ G+GPE + + + PQ P I+ +N +TV V W
Sbjct: 774 VVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRW 833
Query: 515 RYVSPSFEEEPIIGYKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
R++ P + + GY V W + + ++P N A + L P YH
Sbjct: 834 RHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVP-ANATSAILGGLRPYSTYH 892
Query: 569 MRVLAFSNGGDGRMSSPAIT 588
+ V AF+ G G SS + +
Sbjct: 893 LEVQAFNGRGPGPASSRSFS 912
>gi|334322024|ref|XP_001371400.2| PREDICTED: neurofascin-like [Monodelphis domestica]
Length = 1188
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 244/554 (44%), Gaps = 70/554 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ ENG+L ++ ++D GIY+C ATN+ G
Sbjct: 462 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYQVHENGSLEMAMARKEDQGIYTCVATNILGK 519
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + N+ L C + L + W + + IGN
Sbjct: 520 AENQVRLEV-KDPTRITRVPEDQVVKRGTNVVLECRVKHDPTLKLTVNWLKDDEPLYIGN 578
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------- 179
E ++ L I + D G Y C+ + + + K + V
Sbjct: 579 RMKKEEDS---------LTIFGVADRDQGSYTCMASTELDRDIAKAYLTVLAAQVVPTNR 629
Query: 180 --------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVS 229
P P +++ ++ + S + W G N PIT Y I + W + S
Sbjct: 630 MAPLPKERPDPPRDLELTDLEERSVRLTWIPGDDNNSPITEYIIQFEEDQFQPGVWHSHS 689
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+H G +++ L P+ Y+F+VIA N++G PS PS +Y T P
Sbjct: 690 KH---------PGSVNSAVLQ-LSPYVNYQFRVIAVNDVGSSHPSLPSERYRTSGAPPES 739
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI- 348
P + G G + ++ I+W P+ PN+ Y + WR++ E + + N +
Sbjct: 740 NPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------EGRESWNNATVW 792
Query: 349 ----AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
VV+ P Y YE++VQA ND G GPE + V +S ED P+ AP V R NS
Sbjct: 793 GSRYTVVQTP---VYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNS 849
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAVYYLSRTTRNWALIVG 458
TAI + WN + + ++G+L +R YW++ + + + + R ++
Sbjct: 850 TAIGLQWN--RVYPDTVQGQLREYRAYYWRDSSLLKGLWVSQKRQFASFSSDRIRGVVSS 907
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L P + Y ++++ N G+GP SE E T + P ++ N T+++ W +
Sbjct: 908 LFPYSNYKLEMVVVNGRGDGPRSE-VKEFTTPEGVPSAPRRFRVRQPNLETINLEWDH-- 964
Query: 519 PSFEEEPIIGYKVR 532
P + GY ++
Sbjct: 965 PEHPNGILTGYNLK 978
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + +G + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPAPDIAWYKKGGDLPAGKVK--FENFNKALRITNVSEEDSGEYFCLA 328
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNRMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 385
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLEAAPPN----PSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVPPR 441
Query: 182 L 182
+
Sbjct: 442 M 442
>gi|335306710|ref|XP_003360546.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Sus scrofa]
Length = 1248
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 265/603 (43%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 492
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K +L GP S E+ ++ C A+ + L
Sbjct: 493 QAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQAYFDSSLQH 544
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL EL ++ I+ G L I + ++D G Y CV + + + ++
Sbjct: 545 SITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRA 599
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG ++V + H ++ + W+ + PI Y I +A W S
Sbjct: 600 ELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS 659
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 660 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 705
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ ++W+PL NAP + Y++ WR + E +
Sbjct: 706 EAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI--- 762
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 763 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILN 820
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W L ++G L G+ + YW E + + + ++ + A++
Sbjct: 821 SSTVLVRWR--HLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILG 878
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y+++V A+N G GP S R T P P A+H++ + T++ + W+
Sbjct: 879 GLRPYSTYHLEVQAFNGRGPGPASSRSFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 934
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D + +P ++ +LSP RY ++ A +
Sbjct: 935 PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 994
Query: 578 GDG 580
G G
Sbjct: 995 GPG 997
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 138/620 (22%), Positives = 238/620 (38%), Gaps = 86/620 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + +G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 400 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 446
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVK------STVGK 167
G + ++ + E + D TN + D G Y C + V
Sbjct: 447 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVAN 506
Query: 168 ISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ K T I++GP + K + + +T A + H W
Sbjct: 507 LQVKDATQILQGPRS--------AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQ 553
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS---------PS 277
++ E +G + D+Y + + + L + +A +L E + P
Sbjct: 554 DLRE--LG-DSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPV 610
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 337
PQ +D+ S++ +SW P + NAP Y I + K +
Sbjct: 611 PQLEV-SDQHLLRQSQV----------RLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKW 657
Query: 338 ETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQ 395
+L K GN A +++ Y Y +V AIN GPG P T+ + E P+ P
Sbjct: 658 YSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPV 714
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + + VTW P+ + N +++Y + P+ T + + + L
Sbjct: 715 DVKGEGNETNNMVVTWKPLRWMDWN------APQVQYRVQWRPQGTQGAWQEQIVSDPLL 768
Query: 456 IVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+V Y +KV A N+ G+GPE + + + PQ P I+ +N +TV V W
Sbjct: 769 VVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRW 828
Query: 515 RYVSPSFEEEPIIGYKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
R++ P + + GY V W + + ++P N A + L P YH
Sbjct: 829 RHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVP-ANATSAILGGLRPYSTYH 887
Query: 569 MRVLAFSNGGDGRMSSPAIT 588
+ V AF+ G G SS + +
Sbjct: 888 LEVQAFNGRGPGPASSRSFS 907
>gi|335306708|ref|XP_003360545.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Sus scrofa]
Length = 1253
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 265/603 (43%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K +L GP S E+ ++ C A+ + L
Sbjct: 498 QAANDQNNMTIVANLQVKDATQILQGPRSAIEKKGSRVAFT--------CQAYFDSSLQH 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G DL EL ++ I+ G L I + ++D G Y CV + + + ++
Sbjct: 550 SITWRGDG-----QDLRELGDSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG ++V + H ++ + W+ + PI Y I +A W S
Sbjct: 605 ELLVVGSPGPVPQLEVSDQHLLRQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK T A+++ L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGKVPGNQTS---ATLK--LSPYVHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ ++W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETNNMVVTWKPLRWMDWNAPQVQYRVQWRPQGTQGAWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 768 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+ + V W L ++G L G+ + YW E + + + ++ + A++
Sbjct: 826 SSTVLVRWR--HLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANATSAILG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y+++V A+N G GP S R T P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSTYHLEVQAFNGRGPGPASSRSFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 939
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D + +P ++ +LSP RY ++ A +
Sbjct: 940 PPLSHNGVLTGYVLSYHPLDDEGKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 999
Query: 578 GDG 580
G G
Sbjct: 1000 GPG 1002
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 138/620 (22%), Positives = 238/620 (38%), Gaps = 86/620 (13%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + +G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIHHGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVK------STVGK 167
G + ++ + E + D TN + D G Y C + V
Sbjct: 452 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNMTIVAN 511
Query: 168 ISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ K T I++GP + K + + +T A + H W
Sbjct: 512 LQVKDATQILQGPRS--------AIEKKGSRVAFTCQAYFDSSLQH-----SITWRGDGQ 558
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS---------PS 277
++ E +G + D+Y + + + L + +A +L E + P
Sbjct: 559 DLRE--LG-DSDKYFIEEGRLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPV 615
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 337
PQ +D+ S++ +SW P + NAP Y I + K +
Sbjct: 616 PQLEV-SDQHLLRQSQV----------RLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKW 662
Query: 338 ETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQ 395
+L K GN A +++ Y Y +V AIN GPG P T+ + E P+ P
Sbjct: 663 YSLGKVPGNQTSATLKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPV 719
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G + + VTW P+ + N +++Y + P+ T + + + L
Sbjct: 720 DVKGEGNETNNMVVTWKPLRWMDWN------APQVQYRVQWRPQGTQGAWQEQIVSDPLL 773
Query: 456 IVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+V Y +KV A N+ G+GPE + + + PQ P I+ +N +TV V W
Sbjct: 774 VVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPELEEIQILNSSTVLVRW 833
Query: 515 RYVSPSFEEEPIIGYKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
R++ P + + GY V W + + ++P N A + L P YH
Sbjct: 834 RHLDPGQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVP-ANATSAILGGLRPYSTYH 892
Query: 569 MRVLAFSNGGDGRMSSPAIT 588
+ V AF+ G G SS + +
Sbjct: 893 LEVQAFNGRGPGPASSRSFS 912
>gi|395531224|ref|XP_003767682.1| PREDICTED: neurofascin [Sarcophilus harrisii]
Length = 1355
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 242/551 (43%), Gaps = 64/551 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ ENG+L ++ ++D GIY+C ATN+ G
Sbjct: 451 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYQVHENGSLEMTMARKEDQGIYTCVATNILGK 508
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + N+ L C + L + W + + IGN
Sbjct: 509 AENQVRLEV-KDPTRIIRVPEDQVVKRGSNVVLECRVKHDPTLKLTVNWLKDDEPLYIGN 567
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP------- 179
E +T L I + D G Y C+ + + + K + V
Sbjct: 568 RMKKEEDT---------LTIFGVADRDQGSYTCMASTELDRDIAKAYLTVLAAQVAPTNR 618
Query: 180 --------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVS 229
P P +++ ++ + S + W G N PIT Y + + W + S
Sbjct: 619 MAPLPKERPDPPRDLELTDLEERSVRLTWIPGDDNNSPITEYIVQFEEDQFQPGVWHSHS 678
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+H G +++ L P+ Y+F+VIA N++G PS PS +Y T P
Sbjct: 679 KH---------PGSVNSAVLQ-LSPYVNYQFRVIAVNDVGSSHPSIPSERYRTSGAPPES 728
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W P+ PN+ Y + WR++ E + + N +
Sbjct: 729 NPGDVKGAGSRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------EGRESWNNATVW 781
Query: 350 VVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI
Sbjct: 782 GSRYMVSPTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKVRVLNSTAI 841
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDN------PEETAVYYLSRTTRNWALIVGLQP 461
+ WN + L + ++G+L +R +W+E + + + + R ++ L P
Sbjct: 842 GLQWNRVYL--DTVQGQLREYRAYFWRESSLLKGLWVSQKRQFASFSSDRARGVVSSLFP 899
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 900 YSNYKLEMVVVNGRGDGPRSEVKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEH 956
Query: 522 EEEPIIGYKVR 532
+ GY ++
Sbjct: 957 PNGILTGYNLK 967
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 16/183 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + +G + FEN N L I+ VS +DSG Y C A
Sbjct: 260 GMDLLLECIASGVPAPDIAWYKKGGDLPAGKVK--FENFNKALRITNVSEEDSGEYFCLA 317
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 318 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNG- 373
Query: 123 RIGNMDLNELETPNIN--IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
D E+ PN + + G + + + Y+C + G + V +++ P
Sbjct: 374 -----DPLEVAPPNPSREVAGDTIIFRDTQIGSSAVYQCNASNDHGYLLANAFVSVLDVP 428
Query: 180 PGL 182
P +
Sbjct: 429 PRM 431
>gi|344248894|gb|EGW04998.1| Contactin-3 [Cricetulus griseus]
Length = 495
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 230/500 (46%), Gaps = 38/500 (7%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +G L I V++ D+G Y+CTA N G
Sbjct: 27 CRASGKPKPSYRWLKNGDALVLEVRISFLNDGGLKILNVTKADAGTYTCTAENQFGKANG 86
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLN 130
L+V P+ P + +A ++ L C + LLD+ + W NG D +
Sbjct: 87 TTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGS 145
Query: 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVE 190
E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P V+V E
Sbjct: 146 HFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDE 204
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 250
+ T+A + WT+G + P+ Y + ART ++ W V+ + + +D T R +E
Sbjct: 205 ITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQTVT--TVPEVIDGKT-RTATVVE- 260
Query: 251 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 310
L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +L I+W+
Sbjct: 261 -LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWDV 319
Query: 311 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPSEF-YYTEYEVKVQA 368
+W + E S+ +K GN V++ + S YYT V+A
Sbjct: 320 R--------------YWNNGGEEESSSK-MKVAGNQTSTVLQGLKSNLAYYT----AVRA 360
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
N G GP S V + + P P V +N+T V N ++ + G+
Sbjct: 361 YNSAGAGPFSATVNATTKKTPPSQPPGNVI---WNATDTKVLLNWEQVKAMENESEVTGY 417
Query: 429 RIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY-LER 487
++ Y + +V L+ + L++ ++ D Y ++V A + G+G SE+ + R
Sbjct: 418 KVFY---RTSSQNSVQVLNTNKTSAELLLPIKED--YIIEVKATTDGGDGTSSEQIRIPR 472
Query: 488 TYRKAPQKPPSAVHIKGINP 507
K + PS I I P
Sbjct: 473 ITSKLIELIPSFTCIGVIEP 492
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 29/240 (12%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + + E P+VAP V G + + + +TW+
Sbjct: 264 WVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVITWD----- 318
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
++YW EE++ + ++ GL+ + YY V AYN+AG
Sbjct: 319 ------------VRYWNNGGEEESSSKMKVAGNQTSTVLQGLKSNLAYYTAVRAYNSAGA 366
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP V I T V + W V E + GYKV
Sbjct: 367 GPFSATVNATTKKTPPSQPPGNV-IWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSS 425
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGE 593
Q+ + +T N A+++ L + Y + V A ++GGDG S P IT ++ E
Sbjct: 426 QNSVQVLNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSKLIE 479
>gi|156717286|ref|NP_001096185.1| neural cell adhesion molecule L1 precursor [Xenopus (Silurana)
tropicalis]
gi|134025431|gb|AAI35443.1| l1cam protein [Xenopus (Silurana) tropicalis]
Length = 1250
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 233/515 (45%), Gaps = 28/515 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E NV++ C P P W+ D + + + + + NG L I+ V+++D GIY CTA
Sbjct: 442 EKTNVSMDCRAFGTPFPTIQWESDLEDNLFALDQFSMHTNGTLTITGVAKEDEGIYRCTA 501
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTE-ELLDVAYIWTH 119
+N G L V + + P + A + + +C + ++ D W
Sbjct: 502 SNNQGNVSISAYLDVRNATKI---ITPPMEQHARKGGKAIFQCKVEFDPKMSDKIIQWRK 558
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
NG I + + I+ L I+N +D G Y C + + + ++V
Sbjct: 559 NGNEIKE----DADNDKYFIEDYTLSISNVQESDHGMYTCAAHTELDAVELTAELVVIDL 614
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P P +++ +TS T+ WT G N PI + I + E + E+ R
Sbjct: 615 PEAPFDLELSNAQETSITLTWTPGNDNNSPIEEFIIEYEED-------SFEPGVWHELTR 667
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +++ L P+ Y+F+VIA NE+G S+PS +Y TPA P + P + G G
Sbjct: 668 VDGDM-FNVDLDLSPYVNYQFRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPREVKGEGT 726
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ ISW+PL N P Y + WR+ E++ E + + V ++ I +
Sbjct: 727 EPQNMYISWKPLKGIDWNGPGFKYLVKWRQLGKEEWK-EVVADSPPVLVSGTSI-----F 780
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
YE+ VQ++ND+G E + V S EDMP + P+ V N +AI V W P++ +
Sbjct: 781 EPYEIIVQSVNDIGRATEPKPVIGHSGEDMPDITPENVGLEAMNESAIKVAWLPVQ--KN 838
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ G L G + Y + + L ALI GL+P + Y V+V N GEG
Sbjct: 839 GLNGHLKGFMVYYTRHNGHNRHPGKLLVHGNTTHALITGLKPYSNYSVEVAIINGKGEGE 898
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
SE + RT P PPS + ++ + T++ + W
Sbjct: 899 HSESRMIRTDEGVP-SPPSFLRLERQSDTSLTLIW 932
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 199/529 (37%), Gaps = 75/529 (14%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FEN--GNLLISPVSRDDSGIYSCTATN 64
+ + C E P P+ W ++GS +I F++ L I V +D G Y C A N
Sbjct: 262 LQLECIAEGLPTPEIEWIP---LLGSTYNERIQFDDFKKTLHIDKVQDEDDGDYQCIAKN 318
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++V P Y+ P A ++ L C + V W NG +
Sbjct: 319 TQGSSSHTFTVVVESAP-YWINKPEDGIYAPGEDIILHCEVGGKPKPKVT--WKINGKSL 375
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL- 182
+ DL N + G L + N D +C ++ G + V +VE PP +
Sbjct: 376 KDSDLYH----NWKLIDGSLVLNNMQLNDTSVVQCEARNKHGNLLANAFVYVVELPPQIL 431
Query: 183 -PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV---SEHVIGKEVD 238
Q + V KT+ ++ D G P I ++ F + S H G
Sbjct: 432 TRNDEQYIVVEKTNVSM---DCRAFGTPFP--TIQWESDLEDNLFALDQFSMHTNGTLTI 486
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA--DKPYQAPSRIGG 296
+++ I ++ A N G S+ N P + +R GG
Sbjct: 487 TGVAKEDEGI-----------YRCTASNNQGNVSISAYLDVRNATKIITPPMEQHARKGG 535
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-----KNDTEFQSETLKEYGNVGIAVV 351
I + ++P +K I WRK K D + +++Y + I+ V
Sbjct: 536 KA--IFQCKVEFDPKMSDK--------IIQWRKNGNEIKEDADNDKYFIEDY-TLSISNV 584
Query: 352 RIPSEFYYT-EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ YT ++ A+ +E+V I D+P+ AP + T+I +T
Sbjct: 585 QESDHGMYTCAAHTELDAVELT-----AELVVI----DLPE-APFDLELSNAQETSITLT 634
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDTKYYVKV 469
W P N I I ++ED+ E + L+R + + + + L P Y +V
Sbjct: 635 WTP-----GNDNNSPIEEFIIEYEEDSFEPGVWHELTRVDGDMFNVDLDLSPYVNYQFRV 689
Query: 470 MAYNNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+A N G S+RY T AP K P V +G P ++++W+
Sbjct: 690 IAVNEVGPSNGSNPSDRY--ETPAFAPAKNPREVKGEGTEPQNMYISWK 736
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 28/236 (11%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDM-PQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VGP S + P P+ V G + ++W P++ I
Sbjct: 682 YVNYQFRVIAVNEVGPSNGSNPSDRYETPAFAPAKNPREVKGEGTEPQNMYISWKPLKGI 741
Query: 418 REN-------IRGRLIGHRIKYWKE---DNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
N ++ R +G + WKE D+P L+ G Y +
Sbjct: 742 DWNGPGFKYLVKWRQLGK--EEWKEVVADSPP--------------VLVSGTSIFEPYEI 785
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V + N+ G E + + + P P V ++ +N + + V W V + +
Sbjct: 786 IVQSVNDIGRATEPKPVIGHSGEDMPDITPENVGLEAMNESAIKVAWLPVQKNGLNGHLK 845
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
G+ V + +R ++ GNT A I L P Y + V + G+G S
Sbjct: 846 GFMV-YYTRHNGHNRHPGKLLVHGNTTHALITGLKPYSNYSVEVAIINGKGEGEHS 900
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 26/176 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTA 62
G ++ + C PKPK WK +G + ++ +G+L+++ + +D+ + C A
Sbjct: 349 GEDIILHCEVGGKPKPKVTWKINGKSLKDSDLYHNWKLIDGSLVLNNMQLNDTSVVQCEA 408
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVA 114
N HG ++ + Y +LPP+I + N+ + C A +
Sbjct: 409 RNKHGN-------LLANAFVYVVELPPQILTRNDEQYIVVEKTNVSMDCRAFGTPFPTIQ 461
Query: 115 YIWTHN-GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
W + + +D + T G L IT + D G Y C + G +S
Sbjct: 462 --WESDLEDNLFALDQFSMHT------NGTLTITGVAKEDEGIYRCTASNNQGNVS 509
>gi|410918979|ref|XP_003972962.1| PREDICTED: neuronal cell adhesion molecule-like [Takifugu rubripes]
Length = 1211
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 239/549 (43%), Gaps = 50/549 (9%)
Query: 10 IFCNPEAAPKPKFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
+ C +P P W KD I G I ENG L I +SG Y+C ATN G+
Sbjct: 469 LHCASFGSPIPVITWFKDIQTSIKDGDPYVIHENGTLEIHVAQPLNSGKYTCIATNNLGI 528
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
E+ L V P+ + P + C+ + L W + G +
Sbjct: 529 KENHVFLEVKE-PTRILKQPEYKVVQRGMRAAFECTVKHDPTLIPTMTWLKDS---GELP 584
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS----------TKTTVIVEG 178
+E +D L I + + D G Y CV+ +T+ S T T IV
Sbjct: 585 DDE----RFVVDADTLTIMDVTDRDKGTYTCVMNTTLDHDSASAVLTVVEATPTPAIVYE 640
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + + + W G + P + I + W N++E
Sbjct: 641 RPDPPTDLEMTDQTERGVRLTWIPGDEHNSPTQKFLIQYEDLLHQPGVWTNLTE------ 694
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + +++ L P Y F+V+A N LGY +PS PS QY T P + P+ + G
Sbjct: 695 VDGTS----TTVQLSLSPHVYYSFRVLAMNRLGYSKPSQPSNQYRTNPAAPDENPADVKG 750
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR-IPS 355
G G+L ISW PL + N P + Y++ WR+ N S K NV VV P+
Sbjct: 751 IGTGPGNLVISWTPLTGFQSNGPGLEYRVQWRQLNAGGDWS--TKNVANVSQFVVSGTPT 808
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y YE++VQAIND G GPE E V +S ED+P AP+GV + NST V W P+
Sbjct: 809 ---YVSYEIRVQAINDYGSGPEPETVIGYSGEDLPLSAPKGVQVKVPNSTFAEVHWEPVP 865
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT-------TRNWALIVGLQPDTKYYVK 468
R ++RG+L G+++ Y ++ ET + R+ + GLQP + Y +
Sbjct: 866 --RSSVRGKLQGYKVYYRRQRGLHETEPEEEPQEQVLTFSGNRSEGRLPGLQPYSVYNLS 923
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ +NN GEGP S + + + P+ P + IN + +T P ++G
Sbjct: 924 IRVFNNKGEGPPS----QSSRFETPEGVPGPPFLNTINRSLDSLTLELGPPLQRNGRLLG 979
Query: 529 YKVRVWEVD 537
Y ++ V+
Sbjct: 980 YTLKYQPVN 988
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 113/275 (41%), Gaps = 31/275 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTA 62
G + + C E P P W+KDG + SG R F+ L IS V D+G Y CTA
Sbjct: 280 GETLELECIAEGLPTPDISWQKDGGELPSG--RVSFQTFQKTLKISDVVEADAGDYRCTA 337
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
TN G ++ V P ++ P + +A + L C E + W NGV
Sbjct: 338 TNRLGSTHHIIKVTVKAAP-FWISAPRNLILAPNETGVLMCRVGGEPKPKIT--WFVNGV 394
Query: 123 RIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEG 178
I N DL +DG + +++ + Y+C + G + V+ E
Sbjct: 395 SIENAPEDLRR------KVDGDTVTLSSVQSGSSAVYQCNASNEFGYLMANAFVNVLAEA 448
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P L +V +V + + A+ G PI +I TWF + I K+ D
Sbjct: 449 PRILTPPNRVYQVITNNPAL--LHCASFGSPI---PVI-------TWFKDIQTSI-KDGD 495
Query: 239 RYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGE 272
Y + ++E +V P ++ ++ IA N LG E
Sbjct: 496 PYVIHENGTLEIHVAQPLNSGKYTCIATNNLGIKE 530
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 15/228 (6%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDM-PQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y +V A+N +G S+ + P P V G + ++W P+ + N
Sbjct: 712 YSFRVLAMNRLGYSKPSQPSNQYRTNPAAPDENPADVKGIGTGPGNLVISWTPLTGFQSN 771
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV--GLQPDTKYYVKVMAYNNAGEG 478
G + +R++ W++ N + ++ N + V G Y ++V A N+ G G
Sbjct: 772 --GPGLEYRVQ-WRQLN---AGGDWSTKNVANVSQFVVSGTPTYVSYEIRVQAINDYGSG 825
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-----RV 533
PE E + + P P V +K N T V W V S + GYKV R
Sbjct: 826 PEPETVIGYSGEDLPLSAPKGVQVKVPNSTFAEVHWEPVPRSSVRGKLQGYKVYYRRQRG 885
Query: 534 WEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ + ++ GN + + L P Y++ + F+N G+G
Sbjct: 886 LHETEPEEEPQEQVLTFSGNRSEGRLPGLQPYSVYNLSIRVFNNKGEG 933
>gi|301616394|ref|XP_002937635.1| PREDICTED: protein sidekick-2-like [Xenopus (Silurana) tropicalis]
Length = 2174
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 150/596 (25%), Positives = 256/596 (42%), Gaps = 36/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 418 DGTAVVLQCETSGAPRPAITWQKGDRVLASGSIQLPRFTLLESGSLLISPAHISDTGTYT 477
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C+ATN G D++ +IV + P ++ + C + + + Y+W
Sbjct: 478 CSATNSRGADDASADIIVW-ARTRITNPPSDQSVIKGTKASMSCGVSHDSSVAIRYVWEK 536
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G + + +P I +D G L I+ D G Y C V S G S + V
Sbjct: 537 DGFPVSVEN-----SPRIQLDKNGTLHISQTWSGDIGTYTCRVLSVGGNDSRSAHLRVRQ 591
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + W P+ Y + N N+ W ++
Sbjct: 592 LPHAPENPVATLSLVESRAINLTWVKPFDGNSPLLRYIVEVSEN-NAPW-----TILLGS 645
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+D + A + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 646 LD---PEQTALVVRNLVPARSYQFRLCAANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMA 702
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P P QN Y + + +Q L N I + +
Sbjct: 703 SGRTNQSIMIQWQPAPENHQNGILKGYVVRYCLSGLPVGYQYRNL---SNPSINHLLLED 759
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T YE++V A N G G S VT ++ + +P V P+ V + NSTAI TWNP
Sbjct: 760 LIIWTNYEIEVAAFNSAGVGVFSGKVTEWTLQGVPTVPPENVKTEAVNSTAIRFTWNPPS 819
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAY 472
+ + G G+++ W+ +E V + + + +I GL+ T Y ++ +
Sbjct: 820 --PQFVNGINQGYKLMVWEPGQEDEIMVITVRPKFQENTHVGIISGLKKFTSYITSILCF 877
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S+ L T P P + I T++ VTW+ P+ + + GYK+
Sbjct: 878 TTPGDGPRSQPQLVWTQEDVP-GPVGHLSFDDILDTSLRVTWQ--EPAEKNGLLTGYKIS 934
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
E +Q +R + V TL+ + L+ Y ++V ++ G G +SS I+
Sbjct: 935 WEEFNQTNTRVTHYLPNV--TLEYRVTGLTSLTTYTIQVAGMTSKGQGVVSSSTIS 988
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 182/433 (42%), Gaps = 55/433 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIG 234
PP P +Q +V + + W G+ P+ +Y I + + W +S +
Sbjct: 1405 PPSKPTVLQE-DVKARTVLLSWDPGSDGLSPVRYYTIQTLELPKGKWVVHSATISHNSTS 1463
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1464 AVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESEALTTLQAAPGEAPTIL 1511
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+ ++ N + + I +R+ +S T++ N G +
Sbjct: 1512 SVNPHTTTSVLIRWQAPAEDRINGILLGFCIRFRELAYDGLRSFTMQSINNPGAKWAELT 1571
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
+ + + YE++V N G GP S +F E +P PQ
Sbjct: 1572 ASYMMRNLSEPTLTQYELDNLNKHKRYEIRVSMYNAAGEGPSSIPQEVFVGEAVPTAPPQ 1631
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
+ + ++VTW P L +N G + G++I YW +++ E+ +L T
Sbjct: 1632 NIAIASTTAVQLDVTWEPPPLEAQN--GDIQGYKIFYWEILRKNETEKVRTLFLPETGVK 1689
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y + V A+N AG+GP + +T + AP P S + + T+V+V
Sbjct: 1690 LKNLTGY---TTYLISVAAFNAAGDGPRGQPIRGQTQQAAPSAPAS-IRFSELTTTSVNV 1745
Query: 513 TWRYVSPSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
+W +P + + GY++ V+E VD +S+ + + L + DL+ G Y
Sbjct: 1746 SWD--APIYPNGILEGYRL-VYEPCTPVD-GISKIVTVDVKGNSPLWMKVKDLAEGVTYR 1801
Query: 569 MRVLA--FSNGGD 579
R+ A F+ G D
Sbjct: 1802 FRIRAKTFTYGPD 1814
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ ++ A NDVG G S+ S E+ P PQ V + G + +I + W P +N
Sbjct: 664 YQFRLCAANDVGKGQFSKDTQRVSLPEEPPSAPPQNVMASGRTNQSIMIQWQPAPENHQN 723
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P LS + N L+ L T Y ++V A+N+AG G
Sbjct: 724 --GILKGYVVRYCLSGLPVGYQYRNLSNPSINHLLLEDLIIWTNYEIEVAAFNSAGVGVF 781
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S + E T + P PP V + +N T + TW SP F GYK+ VWE Q+
Sbjct: 782 SGKVTEWTLQGVPTVPPENVKTEAVNSTAIRFTWNPPSPQFVNGINQGYKLMVWEPGQED 841
Query: 541 SRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
T+ P NT I L Y +L F+ GDG S P + +
Sbjct: 842 EIMVITVRPKFQENTHVGIISGLKKFTSYITSILCFTTPGDGPRSQPQLVW 892
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 174/420 (41%), Gaps = 28/420 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + A +T YKI + +N T V+ ++
Sbjct: 895 EDVPGPVGHLSFDDILDTSLRVTWQEPAEKNGLLTGYKI-SWEEFNQTNTRVTHYLPNVT 953
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V G G SS + P + P APS +G
Sbjct: 954 LEYRVTG---------LTSLTTYTIQVAGMTSKGQGVVSSSTISSGVPPELP-GAPSNLG 1003
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-------FQSETLKEYGNVGI 348
IG S++ + P + + + N TE +Q ++G+
Sbjct: 1004 IS--NIGSRSVTLQFRPGFDGKTSISKWLVEAQVGNPTESDDWVLIYQLANEPNARSLGV 1061
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ +R Y Y +++ +N VG P S I + + P + P R + T++
Sbjct: 1062 SGLRP-----YNYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPSMFPANETLRTASQTSL 1116
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
V W P+ + N +G++I+Y + D + + + I L+ T+Y V
Sbjct: 1117 WVRWVPLPEMEYNGNPDSVGYKIRYARLDKKGKPFTHVIYDRIEREYTIEDLEEWTEYAV 1176
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
++ A+N G GP S RT P P+ V +++ V W + I+
Sbjct: 1177 QIQAFNAIGAGPWSPVITARTRESVPSSGPTNVSALATTSSSILVRWSEIPEPERNGLIL 1236
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GYKV E D D S + ++ ++ A + L Y ++VLAF+ GDG S+PAI
Sbjct: 1237 GYKVLYKEKDSDTS-THFWLVEGNSSRSAQLSGLGKYVLYEIQVLAFTRIGDGAASTPAI 1295
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 177/432 (40%), Gaps = 27/432 (6%)
Query: 160 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 214
+V ++ + ++ ++ PP + P + +TS ++W + NG P + YK
Sbjct: 1079 IVGTSPPSLPSRRIQTLQAPPSMFPANETLRTASQTSLWVRWVPLPEMEYNGNPDSVGYK 1138
Query: 215 I-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273
I AR + F HVI ++R E +IE+ L W+ Y ++ A N +G G P
Sbjct: 1139 IRYARLDKKGKPFT---HVIYDRIER-----EYTIED-LEEWTEYAVQIQAFNAIGAG-P 1188
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT 333
SP T P P+ + + + W +P ++N + YK+ +++K D+
Sbjct: 1189 WSPVITARTRESVPSSGPTNVSALATTSSSILVRWSEIPEPERNGLILGYKVLYKEK-DS 1247
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ + GN + ++ Y YE++V A +G G S + D
Sbjct: 1248 DTSTHFWLVEGNSSRSA-QLSGLGKYVLYEIQVLAFTRIGDGAASTPAILERTLDDVPGP 1306
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P G+ +T++ + W P I I HR+ N V L+ + R +
Sbjct: 1307 PVGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRL---NATNANTATVEVLNPSVRQY 1363
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVH 511
L+P++ Y ++ A G G +E + T ++ +PPS V + + TV
Sbjct: 1364 T-ATALRPESIYLFRITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPTVLQEDVKARTVL 1422
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
++W S P+ Y ++ E+ + + I N+ A + L P Y RV
Sbjct: 1423 LSWDPGSDGL--SPVRYYTIQTLELPKGKWVVHSATI-SHNSTSAVVDRLKPFTSYKFRV 1479
Query: 572 LAFSNGGDGRMS 583
A ++ GD S
Sbjct: 1480 KATNDIGDSEYS 1491
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 137/351 (39%), Gaps = 30/351 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V N G G S P + A P P I L ++WEP P E QN
Sbjct: 1598 YEIRVSMYNAAGEGPSSIPQEVFVGEA-VPTAPPQNIAIASTTAVQLDVTWEPPPLEAQN 1656
Query: 318 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKIF+ +KN+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1657 GDIQGYKIFYWEILRKNETEKVRTLFLPETG------VKLKNLTGYTTYLISVAAFNAAG 1710
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKY 432
GP + + + + P AP + +T++NV+W+ PI G L G+R+ Y
Sbjct: 1711 DGPRGQPIRGQTQQAAPS-APASIRFSELTTTSVNVSWDAPIY-----PNGILEGYRLVY 1764
Query: 433 ---WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489
D + + + W + L Y ++ A GP+ E +
Sbjct: 1765 EPCTPVDGISKIVTVDVKGNSPLWMKVKDLAEGVTYRFRIRA-KTFTYGPDIEANVTTGP 1823
Query: 490 RKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP 549
+ PP I + + + + W P + PI Y + D+ + IP
Sbjct: 1824 GEGAPGPPGEPFISRYS-SAITIHWSSGDPG--KSPITRYIIEARPSDEGLWDILIKDIP 1880
Query: 550 ---VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
T DI L G Y RV+A ++ G G S+P+ + + F
Sbjct: 1881 KEATSYTFSIDI--LKQGVSYDFRVIAVNDYGYGTPSAPSPSVSAQKANPF 1929
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P+P W KD +I R ++ +G+L IS + DD+G++ C A N
Sbjct: 329 VEIPCQAKGVPQPIISWYKDAVLIDIRRDARFRLVSSGSLRISGLIPDDTGMFQCFARNE 388
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ + L+C T A W G R+
Sbjct: 389 AGEVQTSTYLAVTSIAPNITRAPQDTTVIDGTAVVLQC--ETSGAPRPAITW-QKGDRV- 444
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ A +D G Y C ++ G +IV
Sbjct: 445 -LASGSIQLPRFTLLESGSLLISPAHISDTGTYTCSATNSRGADDASADIIV 495
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + ++ TI W+ G PIT Y I AR + W ++ I KE YT +
Sbjct: 1836 ISRYSSAITIHWSSGDPGKSPITRYIIEARPSDEGLW-DILIKDIPKEATSYTFSIDILK 1894
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1895 QGV-----SYDFRVIAVNDYGYGTPSAPSPSVSAQKANPF 1929
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 68/191 (35%), Gaps = 25/191 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G+ + P A P+P+ W +DG I R I +N L+I D+G Y A
Sbjct: 130 GDAAVINAPNIASFPQPQVTWFRDGRKIPPTNRIAITKNNTLVILSSVAPDTGRYYVQAV 189
Query: 64 NVHGMDESKGRLIVL-----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
N D + I L P + + + C A+ L
Sbjct: 190 NDKNGDNKTSQPITLTVENVGGPADPIAPIIIIPPQNTSVVTGTSEVSMECVANARPLTK 249
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ +W NGV + N + G L I N +DAG Y C + S+V +S
Sbjct: 250 LNIVWKKNGVPLSN---------GVTEFGRFLTILNPVLSDAGYYSCEATLRSSSVPPVS 300
Query: 170 TKTTVIVEGPP 180
+ V PP
Sbjct: 301 AGAYLTVLEPP 311
>gi|224809606|ref|NP_001139239.1| neurofascin precursor [Danio rerio]
gi|224383688|gb|ACN42744.1| neurofascin neuronal isoform [Danio rerio]
Length = 1369
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 233/540 (43%), Gaps = 58/540 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSC 60
E + C +P P W K+G +GSG G +++ NG L I +D G Y+C
Sbjct: 443 ENNRTFLECPFFGSPLPLLRWFKNG--LGSGLDGGHYRLYHNGTLEIKQARTEDQGTYTC 500
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+++ G E++ RL V P+ + P T ++ C + L W +
Sbjct: 501 VASSILGKMENQVRLEVKE-PTRIVRAPEHKTEPRGTTVRFDCRVKHDPSLPATVTWLKD 559
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---- 176
+ + L+ D L I N + D G Y C K+ + + + + V
Sbjct: 560 EKPLSFSWIGRLKK-----DDESLTIYNVNPDDGGTYTCTAKTEIDEDTASARLTVTEND 614
Query: 177 ----------EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-ST 224
G P P +++ + S + W G N P+TH+ + W
Sbjct: 615 SSSASNRSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPVTHFLVQFEEDRWEPGK 674
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
W N+S + S+ L P+ Y+F+VIA N +G +PS PS +Y T
Sbjct: 675 WQNLSIYDWNLN----------SVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARYQTSG 724
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
P PS + G G K ++ I+W+ + ++N PN+ Y + WR+K DTE +E+
Sbjct: 725 APPDVVPSGLKGWGSKKNNMEITWQAMQNTERNGPNLRYVLSWRRK-DTE------EEWN 777
Query: 345 NVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
N+ A + + + Y YE+K+QA+ND G GPES +V +S ED P AP +
Sbjct: 778 NITTAKTKHVVHNTDTYVPYEIKIQAVNDFGHGPESNMVIGYSGEDKPSAAPTDLRVSKI 837
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKED--------NPEETAVYYLSRTTRNWA 454
NST +N+ W P+E + ++ G +++ YW+E N + + +
Sbjct: 838 NSTKVNIHWEPVE--QSSVNGEFKEYKLYYWREASLIKGLKVNRTKLHKGFFTTAENPSG 895
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++ L P +KY + ++ N EGP+S T P P ++ + VH+ W
Sbjct: 896 ILTELYPYSKYKMYMVVANREHEGPQSNTVEFYTKEGEPGAPKYFRILRHTD--VVHLKW 953
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+ C +PKP W +G I S R++ ++ ++ V + S +Y C A+N H
Sbjct: 355 LVCRANGSPKPTIQWLVNGEPIESSLPNPNRRVLDD-TIIFETVQFESSAVYQCNASNEH 413
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--------WT 118
G + + VL + P+ + +N ++ + L+ + W
Sbjct: 414 GYLLANAFVSVL-------DMAPR--MLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWF 464
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG+ G +D G LEI A D G Y CV S +GK+ + + V+
Sbjct: 465 KNGLGSG-LDGGHYRL----YHNGTLEIKQARTEDQGTYTCVASSILGKMENQVRLEVKE 519
Query: 179 P 179
P
Sbjct: 520 P 520
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 32/256 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG + + C P P W K G + + R + L I VS +D G Y+C A+N
Sbjct: 260 GGELLLECIAAGVPTPTITWSKRGGDLPTKKVRIGNFDKTLRILNVSEEDIGSYTCMASN 319
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P + E+ P + +A + +L C A+ + W NG I
Sbjct: 320 RIGSIRHTVEVQVKAAPFWLEK-PINLVLAPDESGRLVCRANGSPKPTIQ--WLVNGEPI 376
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
+ L PN + + F + Y+C + G + V +++ P +
Sbjct: 377 E----SSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANAFVSVLDMAPRML 432
Query: 184 GG----VQVVEVHKTSA----------TIQW-TDGATNGRPITHYKII---------ART 219
G ++V+E ++T ++W +G +G HY++ ART
Sbjct: 433 GPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGTLEIKQART 492
Query: 220 NWNSTWFNVSEHVIGK 235
T+ V+ ++GK
Sbjct: 493 EDQGTYTCVASSILGK 508
>gi|126340549|ref|XP_001362992.1| PREDICTED: neuronal cell adhesion molecule isoform 3 [Monodelphis
domestica]
Length = 1183
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 239/554 (43%), Gaps = 46/554 (8%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 500 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 558
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 559 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 608
Query: 158 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 217
CV +++ +S + V P P +++ + S + W G N PIT + I
Sbjct: 609 TCVANTSLDIVSASAMLRVVDRPNPPFDLELTSFLERSVQLSWIPGEENNSPITEFIIEY 668
Query: 218 RTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 275
++ W + ++ V G + + E L P+ Y F+VIA N +G PS
Sbjct: 669 EDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAVNSIGRSLPSE 718
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTE 334
S Y T A +P + P+ + G G + +L I+W+PL N P + YK+ WR+K+ D E
Sbjct: 719 ASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSWRQKDGDDE 778
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
+ S + NV +V F Y VKVQA+N+VG PE ++ S ED+P VAP
Sbjct: 779 WTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAP 833
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT----- 449
V NST V W P+ ++IRG L G+RI YWK N + ++ +
Sbjct: 834 SNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFN 891
Query: 450 -TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
+ ++ GL+P + Y + V N GEGP S + T P P + +K +NPT
Sbjct: 892 GNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP---LFLKIVNPT 948
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKR 566
+T + PS + Y ++ ++ ++ D IP N + +LS R
Sbjct: 949 LDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSLILRNLSYSTR 1007
Query: 567 YHMRVLAFSNGGDG 580
Y A + G G
Sbjct: 1008 YKFYFYAQTAAGTG 1021
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 123/546 (22%), Positives = 206/546 (37%), Gaps = 65/546 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 282 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 340
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 341 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 397
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 398 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 451
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 452 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 500
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 501 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 556
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E + P + + W K ND F + N + ++ I E
Sbjct: 557 --VSFECTVKHD---PTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 605
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
T V +++ V VV D P P + F ++ ++W P E
Sbjct: 606 ATYTCVANTSLDIVSASAMLRVV------DRPN-PPFDLELTSFLERSVQLSWIPGEENN 658
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI--VGLQPDTKYYVKVMAYNNAG 476
I +I + ED E +++ + L P KY +V+A N+ G
Sbjct: 659 SPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAVNSIG 712
Query: 477 E---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
SE Y+ T P++ P+AV G P + +TW+ + P + YKV
Sbjct: 713 RSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKVSW 770
Query: 534 WEVDQD 539
+ D D
Sbjct: 771 RQKDGD 776
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 14/181 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 485
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 486 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 538
Query: 179 P 179
P
Sbjct: 539 P 539
>gi|339238857|ref|XP_003380983.1| putative fibronectin type III domain protein [Trichinella spiralis]
gi|316976074|gb|EFV59418.1| putative fibronectin type III domain protein [Trichinella spiralis]
Length = 1127
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 251/553 (45%), Gaps = 79/553 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V + C+ EAAPKP+ W K+ I S R I N L IS V+ D+G+Y C
Sbjct: 375 GQDVDLDCSVEAAPKPEVKWMDNKEREIKDSRPRFHILSNHTLRISAVTAKDAGLYFCHV 434
Query: 63 TNVHGMDESKGRLIVLHG----PSYY----------------EQLPPKITIAAHRNLQLR 102
N +G++ +K +L V P+++ E P K I A+ L
Sbjct: 435 NNKYGLNRAKRKLEVYSMFQPFPTFHKFKAILSLIEATQFLVELKPAKAIIDANSKFNLF 494
Query: 103 CSAHTEELLDVAYIWTHNGVRIGNMDLN--ELETPNINIDGGLLEITNASFADAGEYECV 160
C A ++ L++ Y+W + + + N N ++ PN LEI +G Y CV
Sbjct: 495 CEAKADDRLEIEYLWYRDQILLNNASDNAYRIDIPN------KLEIVKPRGRHSGIYTCV 548
Query: 161 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 220
K+ V + +K +IV+ P P + + + ++ A ++W N PIT Y + T
Sbjct: 549 SKTKVDTLKSKMQLIVKDVPESPKLLSI-DCNERRALVRWAAAYDNHEPITKYTVEYETA 607
Query: 221 WN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
++ + W + ++ D+ T EA I L PW Y F+VIA N+ G G P
Sbjct: 608 FHKNVWIPA---LTEEQTDQKTF--EAVIN--LSPWVNYTFRVIASNKRGAGTPGYLKAT 660
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND----TEF 335
TP PY P + G + +L P+ +E+ N Y I +R EF
Sbjct: 661 CQTPPSYPYTNPKNVSAAGTEKDNL-----PMSKEECNGERFRYLIRYRLDEPGTSWEEF 715
Query: 336 QSET-LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVA 393
+ E L+++ V I + + +Y V+VQA+N +G + E+ +S +D+P A
Sbjct: 716 EVEDPLQDH-------VVIRDQPTFRKYVVQVQAVNAIGRSLMTPEMYIGYSGQDIPVAA 768
Query: 394 PQGV-FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK--------EDNPEETAVY 444
P+ V + NST+I + W+ ++ +++RG G++I W D P+ T
Sbjct: 769 PENVKVTEVINSTSIVLEWDHVD--PDSVRGHFYGYKILCWLVNDAGKRVTDKPKVT--- 823
Query: 445 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV---H 501
L+ T A++ LQP + Y V+AYN+ +GP S Y P+ PSAV H
Sbjct: 824 -LAPPTERTAVLKDLQPMSTYQTAVLAYNSMHDGPTS----SWIYITTPEGTPSAVRNLH 878
Query: 502 IKGINPTTVHVTW 514
K + T+ +W
Sbjct: 879 AKALGANTILTSW 891
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 9/201 (4%)
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
Q P ++ N +A + + + +E G + I+Y + D P + +
Sbjct: 662 QTPPSYPYTNPKNVSAAGTEKDNLPMSKEECNGERFRYLIRY-RLDEPGTSWEEFEVEDP 720
Query: 451 RNWALIVGLQPD-TKYYVKVMAYNNAGEGPES-ERYLERTYRKAPQKPPSAVHI-KGINP 507
+++ QP KY V+V A N G + E Y+ + + P P V + + IN
Sbjct: 721 LQDHVVIRDQPTFRKYVVQVQAVNAIGRSLMTPEMYIGYSGQDIPVAAPENVKVTEVINS 780
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND----TIIPVGNTLDADIVDLSP 563
T++ + W +V P GYK+ W V+ R D T+ P A + DL P
Sbjct: 781 TSIVLEWDHVDPDSVRGHFYGYKILCWLVNDAGKRVTDKPKVTLAP-PTERTAVLKDLQP 839
Query: 564 GKRYHMRVLAFSNGGDGRMSS 584
Y VLA+++ DG SS
Sbjct: 840 MSTYQTAVLAYNSMHDGPTSS 860
>gi|301786901|ref|XP_002928861.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule
L1-like [Ailuropoda melanoleuca]
Length = 1229
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 154/604 (25%), Positives = 264/604 (43%), Gaps = 63/604 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 407 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 466
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N V + K + GP S E+ K+T C A + L
Sbjct: 467 QAANDQNNVTVVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CEASFDPSLQH 518
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G +L E ++ I+ G L I + ++D G Y CV + + + ++
Sbjct: 519 SITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSLDYSDQGNYSCVAGTELDVVESRA 573
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 574 ELLVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPQEWYS 633
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 634 ---------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTP 679
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 680 EAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGTWQEQI--- 736
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQ++N G GPE ++ +S ED PQ +P+ + N
Sbjct: 737 --VSDPLLVVSNTSTFVPYEIKVQSVNSQGKGPEPQITIGYSGEDYPQASPELEGVKILN 794
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIV 457
S+A+ V W P++ + ++G L G+ + YW E + + + + ++ A++
Sbjct: 795 SSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHAHKSHVLVPANTTSAVLG 852
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y ++V A+N G GP SE RT P P A+H++ + T++ + W+
Sbjct: 853 GLRPYSSYRLEVQAFNGRGLGPASEMTF-RTPEGVPGH-PEALHLECQSDTSLLLHWQ-- 908
Query: 518 SPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
P ++ GY + +D +P ++ +LSP RY ++ A +
Sbjct: 909 PPQLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTK 968
Query: 577 GGDG 580
G G
Sbjct: 969 EGPG 972
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 140/630 (22%), Positives = 242/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 314 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 373
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + T LL A+
Sbjct: 374 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 420
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 421 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTVVAN 480
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G Q + K + + +T A+ + H W N+ E
Sbjct: 481 LQVKDATQITQGPQSA-IEKKGSKVTFTCEASFDPSLQH-----SITWRGDGRNLQEF-- 532
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + + L + +AG EL E + +P P S
Sbjct: 533 -GDSDKYFIEDGRLVIHSLDYSDQGNYSCVAGTELDVVESRAELLVVGSPGPVPQLELS- 590
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 591 -DRHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPQEWYSLGKVPGNQTSTTLK 647
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G ++ + +TW
Sbjct: 648 LSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITW 704
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 705 KPLRWMDWN------APQVQYRVQWRPQGTRGTWQEQIVSDPLLVVSNTSTFVPYEIKVQ 758
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ N+ G+GPE + + + PQ P +K +N + V V W V P+ + + GY
Sbjct: 759 SVNSQGKGPEPQITIGYSGEDYPQASPELEGVKILNSSAVLVRWWPVDPAQVKGHLRGYN 818
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + + + + ++P NT A + L P Y + V AF+ G G S
Sbjct: 819 VTYWWEGSQRKHSKRHAHKSHVLVP-ANTTSAVLGGLRPYSSYRLEVQAFNGRGLGPASE 877
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF+ E + L S T LL+
Sbjct: 878 --MTFRTPEGVPGHPEALHLECQSDTSLLL 905
>gi|193697717|ref|XP_001944384.1| PREDICTED: neuroglian-like [Acyrthosiphon pisum]
Length = 1247
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 158/600 (26%), Positives = 264/600 (44%), Gaps = 63/600 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G +TI C PKP W ++ NI +GGR + G+L IS V D+G Y+C AT
Sbjct: 445 DGRAITIGCKNFGVPKPHVKWTRN-NIELTGGRYTTLDTGDLQISEVGFTDAGNYTCIAT 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N +G + G L + + P + A C+A ++ L + W
Sbjct: 504 NNYGSANASGTLTIKEH-TRITAAPEDYEVVAGSVATFHCTATSDRSLHLNMEWLARDEP 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I N D E + + + IT D+G Y C+ ++ + + + +IV+ P P
Sbjct: 563 I-NFDT---EPRFVKTNDYSMTITKTIELDSGMYTCLARTELDQATASAMLIVQDKPNPP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + +K A ++W N PI Y I T++ TW S++V
Sbjct: 619 QLLGIT-CNKRDAAVKWQPKGDNRAPILRYTIEYNTSFAPDTWSVASDNV---------- 667
Query: 243 RKEASIENVLVP---WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
AS + +VP W+ + F+VIA N++G PS S T D PY+ P + G
Sbjct: 668 --PASGQTYIVPMTPWANFTFRVIAMNKIGRSNPSLHSSVCTTQPDVPYKNPENVEAAGT 725
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L ISW P+P+ + NAP + Y+++W K D Q +E + + + I ++ Y
Sbjct: 726 TPSNLVISWTPMPKIEHNAPGLRYRVYW--KQDIPGQVWNSEEITDYTVKELVIDNQPTY 783
Query: 360 TEYEVKVQAINDVGPGPESEV----VTIFSAEDMPQVAPQGVFSRGFNSTAINVT----- 410
Y+VKV A N+ G ES V V +S ED+P PQ N T +NVT
Sbjct: 784 QRYKVKVVASNEKG---ESNVQQKEVIGYSGEDIPVETPQ-------NLTVLNVTGSRSA 833
Query: 411 ---WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
W+P+ E+I+G G++I++W E + E + + A I P+ K++V
Sbjct: 834 ILSWDPVS--PESIKGNFKGYKIQFWTERDGENNMIEEQVSSDTTTAEIKKFLPNAKHFV 891
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP-----TTVHVTWRYVSPSFE 522
+++A+N+ GP S + P+ P VH G++ + + ++W+ P
Sbjct: 892 RILAHNSRFNGPPSHPPV---VFDTPEGVPGPVH--GVDAEQWGSSAILLSWQ--PPEEA 944
Query: 523 EEPIIGYKVRVWEVDQD--MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY++ + Q+ ++ I A + L P Y + + A + G G
Sbjct: 945 NGVLTGYEISYEAMTQEGVGEKSQRPSITDPKQTTAKLASLKPATNYRIYIKATTKAGVG 1004
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 141/617 (22%), Positives = 247/617 (40%), Gaps = 78/617 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYS 59
EG I C P+P W +G + RR + N + I+ + ++D+G Y
Sbjct: 351 AEGETAVIKCEASGNPEPTIKWIHNGRPLSEAPINPRRSVTSN-TITITSLIKNDTGNYG 409
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G + VL + P K+ R + + C V WT
Sbjct: 410 CNATNSIGYVYKDVYINVLALAPEITEPPNKVETVDGRAITIGCKNFGVPKPHVK--WTR 467
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
N + + L+T G L+I+ F DAG Y C+ + G + T+ ++
Sbjct: 468 NNIELTGGRYTTLDT-------GDLQISEVGFTDAGNYTCIATNNYGSANASGTLTIKEH 520
Query: 180 PGLPGGVQVVEVHKTS-ATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ + EV S AT T AT+ R + + N W E +
Sbjct: 521 TRITAAPEDYEVVAGSVATFHCT--ATSDRSL---------HLNMEWLARDEPINFDTEP 569
Query: 239 RYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R+ + S+ + + + +A EL S+ DKP P ++ G
Sbjct: 570 RFVKTNDYSMTITKTIELDSGMYTCLARTELDQATASA----MLIVQDKP--NPPQLLGI 623
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS-- 355
D ++ W+ P+ AP + Y I + +T F +T +A +P+
Sbjct: 624 TCNKRDAAVKWQ--PKGDNRAPILRYTIEY----NTSFAPDTW------SVASDNVPASG 671
Query: 356 EFY------YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ Y + + +V A+N +G P S V T + D+P P+ V + G +
Sbjct: 672 QTYIVPMTPWANFTFRVIAMNKIGRSNPSLHSSVCT--TQPDVPYKNPENVEAAGTTPSN 729
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKED------NPEETAVYYLSRTTRNWALIVGLQ 460
+ ++W P+ I N G + +R+ YWK+D N EE Y + L++ Q
Sbjct: 730 LVISWTPMPKIEHNAPG--LRYRV-YWKQDIPGQVWNSEEITDYTVKE------LVIDNQ 780
Query: 461 PD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYV 517
P +Y VKV+A N GE + + + + P + P + + + + + ++W V
Sbjct: 781 PTYQRYKVKVVASNEKGESNVQQKEVIGYSGEDIPVETPQNLTVLNVTGSRSAILSWDPV 840
Query: 518 SPSFEEEPIIGYKVRVW-EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
SP + GYK++ W E D + + + + +T A+I P ++ +R+LA ++
Sbjct: 841 SPESIKGNFKGYKIQFWTERDGENNMIEEQV--SSDTTTAEIKKFLPNAKHFVRILAHNS 898
Query: 577 GGDGRMSSPAITFQMGE 593
+G S P + F E
Sbjct: 899 RFNGPPSHPPVVFDTPE 915
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 7/162 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVH 66
V +FC P P+ VW KDG I S R G +L+I V +D G Y+C +N
Sbjct: 264 VELFCIYGGTPLPETVWLKDGLPIQSNERVSQGNYGKSLIIKKVKFEDKGKYTCEVSNGV 323
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G +S + + ++ +P + A ++C A + W HNG +
Sbjct: 324 GSPQSYNIELDVMAMPFFTVVPQIVEGAEGETAVIKCEASGNPEPTIK--WIHNGRPLSE 381
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+N P ++ + IT+ D G Y C +++G +
Sbjct: 382 APIN----PRRSVTSNTITITSLIKNDTGNYGCNATNSIGYV 419
>gi|34922043|sp|Q98902.1|L1CAM_TAKRU RecName: Full=Neural cell adhesion molecule L1; Short=N-CAM-L1;
Short=NCAM-L1; AltName: Full=L1-CAM; Flags: Precursor
gi|1495413|emb|CAA96469.1| neural cell adhesion molecule L1 [Takifugu rubripes]
gi|3098264|gb|AAC15580.1| neural cell adhesion molecule L1 homolog [Takifugu rubripes]
Length = 1277
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 252/595 (42%), Gaps = 52/595 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-- 60
EG + C +PKPK W+ +++ + R + NG L I+ VS DD GIY+C
Sbjct: 457 EGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLV 516
Query: 61 --TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-W 117
+ +V+ E R ++L P P K I C T+ L + W
Sbjct: 517 QGSNISVNAEVEVLNRTVILSPPQALRLQPGKTAI-------FTCLYVTDPKLSSPLLQW 569
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
N +I ++ T DG L I+N D G Y C + + + + +T+ +
Sbjct: 570 RKNDQKIFESHSDKKYT----FDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLC 625
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEH 231
P P +QV T+ WT G N PI Y + + W
Sbjct: 626 DRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGW---------- 675
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+E+ R K+ + L P+ +Y F+VIA N+ G +PS S Y TPAD P P
Sbjct: 676 ---EELKRVAADKK-HVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ L I+WE + + N P+ Y + WR+ + + +EY +V
Sbjct: 732 EDVRSESTDPDTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIV 789
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
F + +E+KVQA+N G GPE + + +S ED+P AP + NST I VTW
Sbjct: 790 TDVQNF--SAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTW 847
Query: 412 NPIELIRENIRGRLIGHRI----KYWKEDNPEETAVYYLSRTTRN--WALIVGLQPDTKY 465
+ ++ +E +RG L+G++I + + +E + +T N I L+P Y
Sbjct: 848 SAVD--KETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRPYCHY 905
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+ + A+N+ GEGP SE+ T P P S ++ +P+ +T + PS
Sbjct: 906 DLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMS---MQMTSPSESEITLHWTPPSKPNGI 962
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY ++ ++ D + I + L Y ++A + G G
Sbjct: 963 LLGYSLQYRKMQSDDNPLQVVDIASPEITHLTLKGLDRHSHYQFLLMARTAAGKG 1017
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 142/620 (22%), Positives = 242/620 (39%), Gaps = 102/620 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCT 61
G V + C + P P W +G + + RR + E+G+L++ V D+ IY C
Sbjct: 363 GETVKLDCQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQ 422
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDV 113
A+N HG I+ + Y +LPP+I T + L C V
Sbjct: 423 ASNKHGT-------ILANTNVYVIELPPQILTENGNTYTFVEGQKALLECETFGSPKPKV 475
Query: 114 AYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W + + + L P +N+ G LEI N S D G Y C+V+ + ++ +
Sbjct: 476 T--WESSSISL------LLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEV 527
Query: 173 -----TVIVEGPPGL---PG------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218
TVI+ P L PG + V + +S +QW N + I +
Sbjct: 528 EVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSPLLQWRK---NDQKIFESHSDKK 584
Query: 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
++ +S G E Y ++I +L E SS
Sbjct: 585 YTFDGPGLIISNVEPGDE-------------------GVYTCQIIT--KLDMVEASSTL- 622
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
T D+P P + K ++++W P + N+P + Y + EF+ +
Sbjct: 623 ---TLCDRP-DPPVHLQVTNAKHRVVTLNW--TPGDDNNSPILEYVV--------EFEDQ 668
Query: 339 TLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQ 391
+KE G + V + Y Y +V AIND G S++ ++ + D P
Sbjct: 669 DMKENGWEELKRVAADKKHVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPD 728
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAVYYLSR 448
P+ V S + + +TW E+ + N G + + W+ P+ Y ++
Sbjct: 729 SNPEDVRSESTDPDTLVITWE--EMDKRNFNGPDFKYLV-MWRRVVGSGPDWHEEYTIAP 785
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
++ +Q + + +KV A N G GPE + + + P + P + + N T
Sbjct: 786 P----FIVTDVQNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENST 841
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA----NDTIIPVG-NTLDADIVDLSP 563
T+ VTW V ++GYK+ + SRA N ++ G N I +L P
Sbjct: 842 TIRVTWSAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRP 901
Query: 564 GKRYHMRVLAFSNGGDGRMS 583
Y + + AF++ G+G +S
Sbjct: 902 YCHYDLAISAFNSKGEGPLS 921
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
+A G + + C + P PK W +KDG + S + +F+ L + +S D G Y
Sbjct: 269 HALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNISESDGGEYQ 327
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CTA NV G + V P Y+ P A ++L C A + + WT
Sbjct: 328 CTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGIPSPTITWTV 384
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + LE + G L + + F D Y+C + G I T V ++E
Sbjct: 385 NGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIEL 441
Query: 179 PPGL 182
PP +
Sbjct: 442 PPQI 445
>gi|344252851|gb|EGW08955.1| Contactin-1 [Cricetulus griseus]
Length = 461
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 203/391 (51%), Gaps = 17/391 (4%)
Query: 142 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT 201
G L I NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W+
Sbjct: 11 GELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWS 70
Query: 202 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFK 261
G+ N PI+ Y I +T + W + E G EA+ L+PW YEF+
Sbjct: 71 RGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-----GNMEAAKAVDLIPWMEYEFR 125
Query: 262 VIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 321
V+A N LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N
Sbjct: 126 VVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGSNRELTITWAPLSREYHYGNNF 185
Query: 322 YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 381
Y + ++ + E++ T+ + G V + + T ++VKV+A N+ G GP S +
Sbjct: 186 GYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLIA 244
Query: 382 TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI-ELIRENIRGRLIGHRIKYWKEDNPEE 440
I SA+D P AP V + +S+ I+V W + E I E+ ++I+YW + +E
Sbjct: 245 VINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVES-------YQIRYWAAHD-KE 296
Query: 441 TAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA 499
A + + T++ + A + L PDT+Y+++V A N+AG GP S+ +E RKAP P
Sbjct: 297 AAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD-VIEAFTRKAPPSQPPR 355
Query: 500 VHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ + + +TW +V E + GYK
Sbjct: 356 IISSVRSGSRYIITWDHVVALSNESTVTGYK 386
>gi|126308803|ref|XP_001378472.1| PREDICTED: protein sidekick-2 [Monodelphis domestica]
Length = 2258
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/598 (26%), Positives = 259/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 501 DGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLESGSLLISPTRISDAGSYT 560
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + P ++ + C + + V Y+W
Sbjct: 561 CLATNSRGVDEASADLVVW-ARTRITMAPQDQSVIKGTKAFMTCGVTHDPSVSVRYVWEK 619
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G +D TP + +D G L I+ D G Y C V S G S + V
Sbjct: 620 DGAILG-VD----STPRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAYLRVRQ 674
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + S + W P+ HY + N N+ W V+
Sbjct: 675 LPHAPEHPVATLSTAERRSINLTWAKPFDGNSPLIHYVLEMSEN-NAPW-----TVLLPN 728
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 729 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 783
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I F +Q + N + + +
Sbjct: 784 IASGRTNQSIMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQ---FRNITNADVNNLLL 840
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE+ V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 841 EELIIWTNYEISVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVRAEAINSTTIRFTWNA 900
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 901 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 958
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + GY+
Sbjct: 959 CFTTPGDGPRSLPQLVRTHEDVP-GPVGHLSFNEILDTSLKVSWQ--EPGERNGILTGYR 1015
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 1016 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 1071
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 171/405 (42%), Gaps = 36/405 (8%)
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 250
V S + W G+ P+ +Y I R + W S V T + + +
Sbjct: 1499 VKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGKWALHSSSV--------THNATSFVVD 1550
Query: 251 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 310
L P+++Y+F+V + N++G E S S T P +AP+ + + ISW+P
Sbjct: 1551 RLKPFTSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQP 1610
Query: 311 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------------ 358
+K N + ++I +R+ + T++ N + S +
Sbjct: 1611 PAEDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQY 1670
Query: 359 -------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YE+++ N VG GP S +F E +P PQ V G +T ++VTW
Sbjct: 1671 ELDNLSKHKRYEIRMSVYNAVGEGPSSSPQEVFVGEAVPTAPPQNVAVHGATATQLDVTW 1730
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P L +N G + G++I +W+ T N + L T Y V V A
Sbjct: 1731 EPPPLEAQN--GDIQGYKIYFWEAQRRNSTERLKTLFLPENGVKLKNLTGYTAYLVSVAA 1788
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N AG+GP S RT + AP PS V + T+V+V+W P F + GYK+
Sbjct: 1789 FNAAGDGPRSAPSQGRTQQAAPSA-PSTVKFSELTTTSVNVSWE--PPLFPNGVLEGYKL 1845
Query: 532 RVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHMRVLA 573
+ E D + + + T+ GN+ L + DLS G Y R+ A
Sbjct: 1846 -IREPDTETTGVSKIVTVDVKGNSPLWLKVKDLSEGMTYRFRIRA 1889
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 197/472 (41%), Gaps = 60/472 (12%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 1033 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1089
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W V H + E D +
Sbjct: 1090 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLANEPDA----RSME 1143
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ N L P++ Y F++ N +G PS PS + T P AP + L +
Sbjct: 1144 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVTLRTASETSLWLR 1202
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K ++ +TL + RI E+ +
Sbjct: 1203 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1254
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S++V + E +P P V + S+++ V WN I
Sbjct: 1255 TEYRVQVQAFNAIGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADR 1314
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
N G ++G+++ Y ++D+ + + + + A + GL Y ++V+A+ G+G
Sbjct: 1315 N--GLVLGYKVVYKEKDSDTQPQFWLVEGNSSLSAQLTGLGRYVLYEIQVLAFTRIGDGT 1372
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S LERT P PP + + PT+V + W+ P+ I+ Y++
Sbjct: 1373 PSSPPILERTLDDVP-GPPMGILFPEVRPTSVRLIWQ--PPAAPNGIILAYQI------- 1422
Query: 539 DMSRANDTIIPVGNTLDADIVD----------LSPGKRYHMRVLAFSNGGDG 580
R N T NT +++ L P Y R++A + G G
Sbjct: 1423 -THRLNTT---TANTASVEVLTPSARQYTATGLKPESIYLFRIMAQTRKGWG 1470
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 175/433 (40%), Gaps = 44/433 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P G+ EV TS + W A I Y+I R N +T S V+ +
Sbjct: 1387 PGPPMGILFPEVRPTSVRLIWQPPAAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1445
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 297
YT L P S Y F+++A G+GE + D+P Q PS+ I
Sbjct: 1446 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1497
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
K + +SWEP +P YY I R+ ++ + N VV F
Sbjct: 1498 NVKARSVLLSWEP--GSDGLSPVRYYTIQTRELPSGKWALHSSSVTHNATSFVVDRLKPF 1555
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
T Y+ +V++ ND+G SE + + P+ AP + +T++ ++W P
Sbjct: 1556 --TSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQPPA- 1612
Query: 417 IRENIRGRLIGHRIKYWKE-------------DNP-----EETAVYY---LSRTTRNWAL 455
+ I G L+G RI+Y + +NP E T++Y LSR +
Sbjct: 1613 -EDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQYE 1671
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L +Y +++ YN GEGP S P PP V + G T + VTW
Sbjct: 1672 LDNLSKHKRYEIRMSVYNAVGEGPSSSPQEVFVGEAVPTAPPQNVAVHGATATQLDVTWE 1731
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMS--RANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ I GYK+ WE + S R +P + +L+ Y + V A
Sbjct: 1732 PPPLEAQNGDIQGYKIYFWEAQRRNSTERLKTLFLPENG---VKLKNLTGYTAYLVSVAA 1788
Query: 574 FSNGGDGRMSSPA 586
F+ GDG S+P+
Sbjct: 1789 FNAAGDGPRSAPS 1801
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P+ YT Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1142 MEVPNLNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPGNVTLRTASETSLWL 1201
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1202 RWMPLPEMEYNGNPESVGYKIKYTRSDGHGKTLSHVVHDRIEREYTIEDLEEWTEYRVQV 1261
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W + + ++GY
Sbjct: 1262 QAFNAIGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGY 1321
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++L A + L Y ++VLAF+ GDG SSP I
Sbjct: 1322 KVVYKEKDSD-TQPQFWLVEGNSSLSAQLTGLGRYVLYEIQVLAFTRIGDGTPSSPPI 1378
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 135/341 (39%), Gaps = 32/341 (9%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G SSP + A P P + G L ++WEP P E QN
Sbjct: 1681 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1739
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1740 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1793
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S + + P AP V +T++NV+W P G L G+++
Sbjct: 1794 DGPRSAPSQGRTQQAAPS-APSTVKFSELTTTSVNVSWEPPLFPN----GVLEGYKLI-- 1846
Query: 434 KEDNPEETAVYYLSRTTRN-----WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
+E + E T V + W + L Y ++ A GPE E + T
Sbjct: 1847 REPDTETTGVSKIVTVDVKGNSPLWLKVKDLSEGMTYRFRIRA-KTFTYGPEIEANIT-T 1904
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
P + I + + + W P + PI Y + D+ + I
Sbjct: 1905 GPGEGAPGPPGIPIIIRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDI 1962
Query: 549 P---VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
P T DI L G Y RV+A ++ G G SSP+
Sbjct: 1963 PKEVTSYTFSMDI--LKHGVSYDFRVIAVNDYGYGTPSSPS 2001
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD +I R ++ +G+L IS + DD+G++ C A N
Sbjct: 412 VDIPCQAKGVPSPITTWYKDAAVIDVKKLSRFRLHGDGSLQISGLVPDDTGMFQCFARNS 471
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 472 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 527
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 528 -LASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLATNSRGVDEASADLVV 578
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
+ ++ I W+ G PIT Y I AR + W ++ I KEV YT + +
Sbjct: 1922 YSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-----I 1975
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
L +Y+F+VIA N+ GYG PSSPS + PA K
Sbjct: 1976 LKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 2008
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 47/273 (17%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I + L+I D+G Y A N D + I
Sbjct: 227 PQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 286
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 124
L GP+ I +A + + C A+ L+ + IW +GV +
Sbjct: 287 LTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPVSG 346
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L I N ++ G YEC + S+V + + V PP
Sbjct: 347 GVSDHNR-----------RLTILNPKGSNTGYYECEAVLRSSSVPSVVRGAVLSVLEPPQ 395
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGR----PITHYKIIARTNWNSTWFNVSEHVIGKEV 237
++ E H T+ + D + PIT TW+ + + K++
Sbjct: 396 F---IKEPERHITAEMEKVVDIPCQAKGVPSPIT------------TWYKDAAVIDVKKL 440
Query: 238 DRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
R+ + S++ + LVP T F+ A N G
Sbjct: 441 SRFRLHGDGSLQISGLVPDDTGMFQCFARNSAG 473
>gi|338711348|ref|XP_001916955.2| PREDICTED: protein sidekick-2 [Equus caballus]
Length = 2162
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 263/600 (43%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 405 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 464
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ LIV + + P ++ + C + + V Y+W
Sbjct: 465 CLATNSRGVDEASADLIVW-ARTRITKSPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 523
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 524 DGAALG-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 578
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 579 LPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLAS 632
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 633 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 687
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 688 IASGRTNQSIMIQWQPPPESHQNGLLKGYVIRYCLAGLPVGYQFKNITDADVNNLLLEDL 747
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 748 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 802
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + T + + GL+ T Y+
Sbjct: 803 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDTVHVGFVSGLKKFTDYFTS 860
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 861 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILSG 917
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 918 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 975
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 187/424 (44%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y + R + W +VS +
Sbjct: 1392 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNAST 1450
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ I
Sbjct: 1451 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTII 1498
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 353
+ I W+P P +K N + ++I +R+ + TL+ N G +
Sbjct: 1499 SVTPHTTTSVLIRWQPPPEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1558
Query: 354 ----------PSEFYY--------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
PS +Y YE+++ N VG GP S +F E +P AP+
Sbjct: 1559 SMYSMRNLSRPSLTHYELDNLNKHRRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPR 1618
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W +++ E +L+ +
Sbjct: 1619 NVAVHGATATQLDVTWEPPPLESQN--GDIQGYKIYFWEAQRQNVTERVKTLFLAESGVK 1676
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1677 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTRAQTQQAAPSA-PSSVKFSELTTTSVNV 1732
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1733 SWE--APRFPNGVLEGYRL-VYEPCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRF 1789
Query: 570 RVLA 573
R+ A
Sbjct: 1790 RIRA 1793
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 201/486 (41%), Gaps = 52/486 (10%)
Query: 120 NGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGKIST 170
+G RI + N T PN+ ++ GL +T + E + G++S
Sbjct: 916 SGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSA 971
Query: 171 KTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NS 223
T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 972 ST--ISSGVPPELPGAPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGE 1029
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
W + H + E D + + + L P++ Y F++ N +G PS PS + T
Sbjct: 1030 EWLLI--HQLTNEPDA----RSLEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTL 1082
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLK 341
P AP+ + L + W PLP + N ++ YKI K + + +TL
Sbjct: 1083 QAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLS 1139
Query: 342 EYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
+ R+ E+ +TEY V+VQA N +G GP S V + E +P P
Sbjct: 1140 H-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSHTVMGRTRESVPSSGPT 1194
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V + S+++ V WN I N G ++G+++ Y ++D+ + + + + A
Sbjct: 1195 NVSALATTSSSMLVRWNEIPEADRN--GLVLGYKVMYKEKDSDSQPRFWLVEGNSSRSAQ 1252
Query: 456 IVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL Y V+V+A+ G+G P LERT P PP + + T+V + W
Sbjct: 1253 LTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIW 1311
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ P+ I+ Y++ ++ + A + + L P Y R+ A
Sbjct: 1312 Q--PPAAPNGIILAYQI-THRLNATTANAATVEVLAPSARQYTATGLKPESVYLFRITAQ 1368
Query: 575 SNGGDG 580
+ G G
Sbjct: 1369 TRKGWG 1374
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1046 LEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWL 1105
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1106 RWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1165
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S + RT P P+ V +++ V W + + ++GY
Sbjct: 1166 QAFNAIGSGPWSHTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGY 1225
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1226 KVMYKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1282
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 192/480 (40%), Gaps = 40/480 (8%)
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
D LE P++N T SF + V S + S K + P P V
Sbjct: 1042 DARSLEVPDLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1094
Query: 188 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ +TS ++W + NG P + YKI +R + + + HV+ V+R
Sbjct: 1095 LRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS---HVVQDRVER--- 1148
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E +IE+ L W+ Y +V A N +G G P S + T P P+ +
Sbjct: 1149 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHTVMGRTRESVPSSGPTNVSALATTSS 1204
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ + W +P +N + YK+ +++K D++ Q GN + ++ Y Y
Sbjct: 1205 SMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRSA-QLTGLGKYVLY 1262
Query: 363 EVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
EV+V A +G G P + + +D+P P G+ +T++ + W P I
Sbjct: 1263 EVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAPNGII 1321
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
I HR+ V L+ + R + GL+P++ Y ++ A G G +
Sbjct: 1322 LAYQITHRLN---ATTANAATVEVLAPSARQYT-ATGLKPESVYLFRITAQTRKGWGEAA 1377
Query: 482 ERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1378 EALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPVRYYTVQTRELPS- 1434
Query: 540 MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRM---SSPAITFQMGEEK 595
R V + +VD L P Y RV A ++ GD S P T Q ++
Sbjct: 1435 -GRWALHSASVSHNASTFVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDE 1493
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 131/339 (38%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + G L ++WEP P E QN
Sbjct: 1585 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1643
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1644 GDIQGYKIYFWEAQRQNVTERVKTLFLAESG------VKLKNLTGYTAYMVSVAAFNAAG 1697
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP V +T++NV+W G L G+R+ Y
Sbjct: 1698 DGPRSTPTRAQTQQAAPS-APSSVKFSELTTTSVNVSWEAPRFPN----GVLEGYRLVYE 1752
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A GPE E + T
Sbjct: 1753 PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANVT-TGP 1810
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + V W P PI Y + D+ + IP
Sbjct: 1811 GEGAPGPPGVPIIVRYSSAIAVHWSSGDPG--RGPITRYVIEARPSDEGLWDILIKDIPK 1868
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G S P+
Sbjct: 1869 EVTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSGPS 1905
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD + R + +G L IS + DD+G++ C A N
Sbjct: 316 VDIPCRAKGVPPPSITWYKDAAAVEVERLSRFRQRADGGLQISALVPDDTGMFQCFARNA 375
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 376 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 431
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G +IV
Sbjct: 432 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLIV 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 108/289 (37%), Gaps = 41/289 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W ++G I R I L+I D+G Y A
Sbjct: 117 GEAAVIRAPRIASFPRPQVTWFREGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 176
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 177 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIR 236
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ IW +G+ + G D N L I N + +D+G YEC + S+V
Sbjct: 237 LHIIWRKDGLLLSGGISDYNR-----------RLTIPNPTGSDSGYYECEAVLRSSSVPS 285
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 286 VIRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYK 334
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
+ V + + R+ R + ++ + LVP T F+ A N G + S+
Sbjct: 335 DAAAVEVERLSRFRQRADGGLQISALVPDDTGMFQCFARNAAGEAQTST 383
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ + W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1822 IIVRYSSAIAVHWSSGDPGRGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1878
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PS PS + PA K
Sbjct: 1879 ---ILKPGVSYDFRVIAVNDYGFGTPSGPS--QSVPAQK 1912
>gi|332019316|gb|EGI59823.1| Neuroglian [Acromyrmex echinatior]
Length = 1291
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 268/588 (45%), Gaps = 46/588 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
+ I C APKP+ W ++G + +GGR KI + G+L I V D+G Y+C A N G
Sbjct: 483 IRITCRVFGAPKPEVKWIRNGQEL-TGGRYKILDVGDLEIENVIFLDAGTYTCYAKNKLG 541
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+ L+V + +P +AA RC+A T+ L + W NG I
Sbjct: 542 EVNASAILMVKEH-TRITDVPEDYEVAAGSTATFRCNAVTDPTLPLTIDWLSNGQPI--- 597
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
D E+E + L IT + D+G Y CV ++ + + S + T+IV+ P P +
Sbjct: 598 DF-EMEPRFVRSSDYSLLITKTTELDSGIYTCVARTDLDETSAQATLIVQDVPNAPRLIS 656
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEA 246
+ + SA +QW N PI Y I T + TW + V +
Sbjct: 657 I-KCQSNSAIVQWIPMGDNRSPILRYTIQYNTTFTPDTWEIAHDQVPATD---------Q 706
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ E + PW+ Y F+V+A N++G PSS S T D P + P + G G +L I
Sbjct: 707 TYEVPMSPWANYTFRVLAWNKIGTSLPSSHSDVCTTLPDLPNKNPDNVVGKGTTPQNLVI 766
Query: 307 SWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
SW + + + N Y+IF+R+ ++ + + ++ + V P+ Y Y +K
Sbjct: 767 SWTVMSQIEHNGAKFEYRIFYRRDIRGEDWITNNIHDWRKNTLVVENQPT---YQRYRIK 823
Query: 366 VQAINDVGPG--PESEVVTIFSAEDMPQVAPQGVFS--RGFNSTAINVTWNPIELIRENI 421
V AIN+ G P EV+ +S ED+P AP G F+ + + T+ V W+P+ +++
Sbjct: 824 VVAINEKGECRVPAKEVIG-YSGEDVPLQAP-GNFTVDKPISGTSAYVRWSPVP--EDSV 879
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSR-TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
RG L+G++I+ W E + E+ R + AL+ P +K YV+++ YN GP
Sbjct: 880 RGELVGYKIQTWTERDGEKGMREIDIRGGNKTEALVEKFVPYSKNYVRMLVYNGRYNGPT 939
Query: 481 SERYLERTYRKAPQKPPSAV---HIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
SE T P+ P V + + +++ W+ P+ + GY++ V+
Sbjct: 940 SETLNFNT----PEGVPGTVLGLEAFPMGSSALYLAWQ--PPAEPNGILTGYRIYYQVVN 993
Query: 538 QD-----MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ R D P + A + L+P Y + + A ++ G+G
Sbjct: 994 GTKLGTLLERKPDVTDPKAKS--AKLATLAPDTIYRVHIRATTSVGEG 1039
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 28/267 (10%)
Query: 359 YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+ Y +V A N +G P S+V T D+P P V +G + ++W +
Sbjct: 715 WANYTFRVLAWNKIGTSLPSSHSDVCTTLP--DLPNKNPDNVVGKGTTPQNLVISWTVMS 772
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---ALIVGLQPD-TKYYVKVMA 471
I N G +RI Y ++ E+ +++ +W L+V QP +Y +KV+A
Sbjct: 773 QIEHN--GAKFEYRIFYRRDIRGED----WITNNIHDWRKNTLVVENQPTYQRYRIKVVA 826
Query: 472 YNNAGEG--PESERYLERTYRKAPQKPPSAVHI-KGINPTTVHVTWRYVSPSFEEEPIIG 528
N GE P E + + P + P + K I+ T+ +V W V ++G
Sbjct: 827 INEKGECRVPAKE-VIGYSGEDVPLQAPGNFTVDKPISGTSAYVRWSPVPEDSVRGELVG 885
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
YK++ W + I GN +A + P + ++R+L + NG +S +
Sbjct: 886 YKIQTWTERDGEKGMREIDIRGGNKTEALVEKFVPYSKNYVRMLVY-NGRYNGPTSETLN 944
Query: 589 FQMGEE--------KEFKSGSPALYSA 607
F E + F GS ALY A
Sbjct: 945 FNTPEGVPGTVLGLEAFPMGSSALYLA 971
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G V ++C P P+ VW K+G +I R G +L+I V+ +D G Y+C
Sbjct: 292 AMRGKKVELYCIFGGTPLPQMVWSKNGQMIKPSDRIIQGNYGKSLIIKHVNFEDQGQYTC 351
Query: 61 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A+N G+D+++ L V+ P Y+ P + A ++RC A + ++ W
Sbjct: 352 EASN--GVDQAQSYSINLQVMASP-YFIVEPEFVNAAEDETAEIRCEASGVPVPEIK--W 406
Query: 118 THNG 121
NG
Sbjct: 407 IRNG 410
>gi|344291041|ref|XP_003417245.1| PREDICTED: protein sidekick-1 [Loxodonta africana]
Length = 2262
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 266/600 (44%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 615 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTHISDAGTYA 674
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 675 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 733
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G + M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 734 DGATLA-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 788
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + K + + W P+ Y + N N+ W V+
Sbjct: 789 LPHAPEHPVAILSTMEKRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLAS 842
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 843 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 897
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 898 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 957
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NSTAI TW
Sbjct: 958 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTAIRFTW 1012
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 1013 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 1070
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 1071 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 1127
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 1128 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 1185
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 1092 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 1150
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 1151 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 1200
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + + +P
Sbjct: 1201 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQMGVIGEGEEWQLVYQLHNEPDARSMEVPD 1260
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1261 LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPL 1320
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D+ +T + + I L+ T+Y V+V A+N
Sbjct: 1321 PEMEYNGNPESVGYKIKYSRSDSHGKTLSHVVHDRVEREYTIEDLEEWTEYRVQVQAFNA 1380
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W + + ++GYKV
Sbjct: 1381 IGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYK 1440
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D + ++ + A + L Y ++VLAF+ GDG S P I
Sbjct: 1441 EKDSD-AHPRFWLVEGNASRSAQLTGLGKYVLYEVQVLAFTRIGDGSRSHPPI 1492
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 169/412 (41%), Gaps = 27/412 (6%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSE 230
++ PP + P V + +TS ++W + NG P + YKI + + + +
Sbjct: 1292 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKI--KYSRSDSHGKTLS 1349
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1350 HVVHDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSSG 1402
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
P+ + + + W +P +N + YK+ +++K+ L E GN +
Sbjct: 1403 PTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYKEKDSDAHPRFWLVE-GNASRSA 1461
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y YEV+V A +G G S + D P G+ +T++ +
Sbjct: 1462 -QLTGLGKYVLYEVQVLAFTRIGDGSRSHPPILERTLDDVPGPPVGILFPEVRTTSVRLI 1520
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
W P I I HR+ + V L+ + R + GL+P+ Y ++
Sbjct: 1521 WQPPTAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQYT-ATGLKPEAVYLFRIT 1576
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
A G G +E + T R+ +PPS V + + +V ++W S P+
Sbjct: 1577 AQTRKGWGEAAEALVVTTERRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPVRY 1634
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y V++ E+ R V + + +VD L P Y RV A ++ GD
Sbjct: 1635 YTVQMRELPS--GRWALHSASVSHNASSFMVDRLKPFTSYKFRVKATNDIGD 1684
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 161/438 (36%), Gaps = 64/438 (14%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y + R + W +VS +
Sbjct: 1602 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQMRELPSGRWALHSASVSHNASS 1660
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ I
Sbjct: 1661 FMVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTII 1708
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKI-------------FWRKKN-------DTE 334
+ I W+ L R+ Q P + FW + T
Sbjct: 1709 SVTPHTTTSVLIRWQMLMRQVQAEPETPFLTSSQGMLKLLALIYFWEAQRWNLTERVKTL 1768
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
F +ET V++ + YT Y V V A N G GP S + + P AP
Sbjct: 1769 FLAET----------SVKLKNLTGYTAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPS-AP 1817
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAVYYLSRTTR 451
V +T++NV+W + G L G+R+ Y D + + +
Sbjct: 1818 SSVKFSELTTTSVNVSWEAPQF----PNGILEGYRLVYEPCTPVDGVSKIVTVDVKGNSP 1873
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
W + L Y ++ A GPE E + T P V I + +
Sbjct: 1874 LWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANIT-TGPGEGAPGPPGVPIIVRYSSAIA 1931
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP---VGNTLDADIVDLSPGKRYH 568
+ W P + PI Y + D+ + IP T DI L PG Y
Sbjct: 1932 IHWSSGDPG--KGPITRYVLEARPSDEGLWDILIKDIPKEVTSYTFSMDI--LKPGVSYD 1987
Query: 569 MRVLAFSNGGDGRMSSPA 586
RV+A ++ G G SSP+
Sbjct: 1988 FRVIAVNDYGFGTPSSPS 2005
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y + AR + W ++ I KEV YT +
Sbjct: 1922 IIVRYSSAIAIHWSSGDPGKGPITRYVLEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1978
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1979 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 2012
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R ++ +G L IS + DD+G++ C A N
Sbjct: 526 VDIPCRAKGVPPPSITWYKDAAVVEVERLSRFRLHGDGGLQISGLLPDDTGMFQCFARNA 585
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 586 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 641
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L ++ +DAG Y C+ ++ G ++V
Sbjct: 642 -LASGSVQLPRFTLLESGSLLVSPTHISDAGTYACLATNSRGVDEASADLVV 692
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 103/281 (36%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 327 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 386
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + + L GP+ I + + L C A+ L+
Sbjct: 387 NDKNGDNKTSQPVTLAVENVGGPADPIAPTIIIPPKNTSVVVGTSEVTLECVANARPLIK 446
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + ++ L I N + +DAG YEC + S+V +
Sbjct: 447 LHIIWKKDGV---------LLSGGVSDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPAVV 497
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 498 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 546
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V + + R+ + ++ + L+P T F+ A N G
Sbjct: 547 AVVEVERLSRFRLHGDGGLQISGLLPDDTGMFQCFARNAAG 587
>gi|444727882|gb|ELW68360.1| Protein sidekick-2 [Tupaia chinensis]
Length = 2167
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 266/600 (44%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 413 DGMSVVLVCETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTHISDAGTYT 472
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P + + C A + + V Y+W
Sbjct: 473 CLATNSRGVDEASADLVVW-ARTRITRPPQDQNVIKGTQASMVCGATHDPRVTVRYVWEK 531
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G +D N P I +D G L I+ D G Y C V S G S + V
Sbjct: 532 DGATLG-VDSN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 586
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y I+ + N+ W V+
Sbjct: 587 LPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 640
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 641 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 695
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 696 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 755
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 756 II-----WTNYEIEVAAYNGAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 810
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 811 NAPS--PQFINGINQGYKLIAWEPELEEEVTMVTARPNFQDSVHVGFVSGLKKFTEYFTS 868
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 869 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILTG 925
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 926 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 983
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 175/417 (41%), Gaps = 47/417 (11%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP P VQ +V S + W G+ P+ +Y + R E G+
Sbjct: 1408 PPSKPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTVQTR-----------ELPSGR--- 1452
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
GR AS L P+++Y+F+V A N++G E S S T P AP +
Sbjct: 1453 --GGRHPAS--GRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDDAPIILSVTP 1508
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ I W+P +K N + ++I +R+ + TL+ N G + S +
Sbjct: 1509 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYS 1568
Query: 359 -------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
+ YE+++ N VG GP S +F E +P AP+ V
Sbjct: 1569 IRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAV 1628
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G +T ++VTW P L +N G + G++I +W+ T N + L
Sbjct: 1629 HGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRRNLTERVKTLFLAENGVKLKNL 1686
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
T Y V V A+N AG+GP S +T + AP P S V + T+V+V+W +P
Sbjct: 1687 TGYTAYMVSVAAFNAAGDGPRSPPTRGQTQQAAPSAPGS-VKFSELTTTSVNVSWE--AP 1743
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHMRVLA 573
F + GY++ V+E + + T+ GN+ L + DL+ G Y R+ A
Sbjct: 1744 QFPNGVLEGYRL-VYEPCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIRA 1799
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 172/397 (43%), Gaps = 37/397 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 945 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1001
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1002 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLI--HQLANEPDA----RSME 1055
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1056 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1114
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1115 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1166
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1167 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWS--EVPEA 1224
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1225 DHNGLVLGYKVMYREKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1284
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
P LERT P PP + + T+V + W+
Sbjct: 1285 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ 1320
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1054 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWL 1113
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1114 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1173
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1174 QAFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWSEVPEADHNGLVLGY 1233
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1234 KVMYREKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1290
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 173/437 (39%), Gaps = 56/437 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTD-GATNGRPITHYKIIART--NWNSTWFNVSEHVIGKE 236
PG P G+ EV TS + W A NG + + A + ++ T + +H +G
Sbjct: 1299 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAPPPLSAHSVPDYTPTQHHHGQHRLGG- 1357
Query: 237 VDRYTGRKEASIENV---LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
GR A + L P S Y F++ A G+GE + +P Q PS+
Sbjct: 1358 -----GRPPAPRQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRARP-QPPSK 1411
Query: 294 --IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + + +SWE P +P YY + R E G A
Sbjct: 1412 PVVQQEDVRARSVLLSWE--PGSDGLSPVRYYTVQTR---------ELPSGRGGRHPASG 1460
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVT 410
R+ +T Y+ +V+A ND+G SE + + P AP + +T++ +
Sbjct: 1461 RLKP---FTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDDAPIILSVTPHTTTSVLIR 1517
Query: 411 WNPIELIRENIRGRLIGHRIKYWKE-------------DNP-----EETAVYY---LSRT 449
W P + I G L+G RI+Y + +NP E T++Y LSR
Sbjct: 1518 WQPPA--EDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELTSMYSIRNLSRP 1575
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
+ + L +Y +++ YN GEGP S P P V + G T
Sbjct: 1576 SLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPRNVAVHGATATQ 1635
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVD-QDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
+ VTW + I GYK+ WE ++++ T+ N + + +L+ Y
Sbjct: 1636 LDVTWEPPPLDSQNGDIQGYKIYFWEAQRRNLTERVKTLFLAENGV--KLKNLTGYTAYM 1693
Query: 569 MRVLAFSNGGDGRMSSP 585
+ V AF+ GDG S P
Sbjct: 1694 VSVAAFNAAGDGPRSPP 1710
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 136/339 (40%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1591 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1649
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1650 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1703
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1704 DGPRSPPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWEAPQFPN----GVLEGYRLVYE 1758
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A A GPE E + T
Sbjct: 1759 PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIRAKTFA-YGPEIEANVT-TGP 1816
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1817 GEGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPK 1874
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1875 EVSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1911
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 149/365 (40%), Gaps = 52/365 (14%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1090 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1147
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1148 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1199
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P N + YK+ +R+K D++ Q GN +
Sbjct: 1200 GPANVSALATTSSSMLVRWSEVPEADHNGLVLGYKVMYREK-DSDSQPRFWLVEGNSSRS 1258
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1259 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1316
Query: 409 VTWNP------IELIRENIRGRLI-----------GHRIKYWKEDNPEETAVYYLSRTTR 451
+ W P I L + + HR+ + P +
Sbjct: 1317 LIWQPPAAPNGIILAPPPLSAHSVPDYTPTQHHHGQHRLGGGRPPAPRQYTA-------- 1368
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTT 509
GL+P++ Y ++ A G G +E + T ++A +PPS V + + +
Sbjct: 1369 -----TGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRARPQPPSKPVVQQEDVRARS 1423
Query: 510 VHVTW 514
V ++W
Sbjct: 1424 VLLSW 1428
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1884
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 105/283 (37%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W ++G I R I L+I D+G Y A
Sbjct: 125 GEAAVIRAPRIASFPRPQVTWFREGRKIPPSSRIAITLENPLVILSTVAPDAGRYYVQAV 184
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + + C A+ L+
Sbjct: 185 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 244
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ +W +G + G D N L I N + +DAG YEC + S+V
Sbjct: 245 LHIVWKKDGALVSGGMSDFNR-----------RLTIPNPTSSDAGYYECEAVLRSSSVAP 293
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 294 VVRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYK 342
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 343 DAAVVEVEKLTRFRQRGDGGLQISGLVPDDTGMFQCFARNTAG 385
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K VWKKDG ++ SGG N L I + D+G Y C A
Sbjct: 231 VTMECVANARPLIKLHIVWKKDGALV-SGGMSDF--NRRLTIPNPTSSDAGYYECEAVLR 287
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
R L VL P + ++ IT + + + C A + + + W +
Sbjct: 288 SSSVAPVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRA--KGVPPPSITWYKDAA 345
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-------- 174
+ ++ +L DGGL +I+ D G ++C ++T G++ T T +
Sbjct: 346 VV---EVEKLTRFRQRGDGGL-QISGLVPDDTGMFQCFARNTAGEVQTSTYLAVTSIAPN 401
Query: 175 IVEGP--PGLPGGVQVVEVHKTSA----TIQWTDG 203
I GP + G+ VV V +TS I W G
Sbjct: 402 ITRGPLDSTVIDGMSVVLVCETSGAPRPAITWQKG 436
>gi|390340332|ref|XP_003725218.1| PREDICTED: neurofascin-like isoform 3 [Strongylocentrotus purpuratus]
Length = 1269
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 271/614 (44%), Gaps = 56/614 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTA 62
E + C+ E P P W G+++ +G + I E G+++I+ DSG Y CTA
Sbjct: 445 EDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELAGSIVINNALEVDSGAYECTA 504
Query: 63 TN-VHGMD-ESKGR-LIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWT 118
N + G D E+ G + + G + P +T+ +C + EL W
Sbjct: 505 ENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQCEITYDHELDKPETYWM 564
Query: 119 HNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST-------VGKIST 170
+G R+ N D L I NA F+++G Y C V++T V ++
Sbjct: 565 KDGQRLEANQD-------------NSLRIDNAMFSNSGTYTCFVETTLDESTDTVHSVNA 611
Query: 171 KTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNV 228
++V+G PG P +Q+ + + + + W G N PI +Y I T W + W
Sbjct: 612 SAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQ 671
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKP 287
+ + RY RK ++ P+ Y+F+VIA NE+G EPS+ +P + P
Sbjct: 672 ANETADDDTSRY--RKVLHLQ----PFVDYQFRVIAVNEIGRSEPSAGVAPTVDPQVAPP 725
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNV 346
+ P + G G + + I W+ + + +Y++ +R + +E F +T+ N
Sbjct: 726 SKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYRPRMSSEPFVKDTVYPE-NT 784
Query: 347 GIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
I F Y EYE V+++N GPGPE E+ FS E P +P GV
Sbjct: 785 DANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGPGPEPEIHYGFSGEAAPGASPSGVTVE 844
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
++ +NVTW PI+ E+ G+L G+ + Y N + + ++ ++ LQ
Sbjct: 845 AISANEVNVTWEPID--PEDANGKLGGYNVYY----NVKIASGQDKQMCVKSPCVVGNLQ 898
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
T Y + V A+ NAGEGP S+ +E A PP V+ ++ + + + P
Sbjct: 899 AATTYEITVKAFTNAGEGPASD-VVEVVTDSA---PPGPVYKLKVDVYSYRLVLNWQEPI 954
Query: 521 FEEEPIIGYKVRVWE-VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ GY V + VD+ + + + V + L I + SP +Y + VLA + GD
Sbjct: 955 LTNGDLTGYNVIITPVVDETLGDEENFPLAVDDDLTL-IYEASPETKYRVEVLALNTIGD 1013
Query: 580 G-RMSSPAITFQMG 592
G + + TF G
Sbjct: 1014 GEKTTEEPTTFLQG 1027
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 131/320 (40%), Gaps = 47/320 (14%)
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 270
HY++ R +S F V + V + D TG + I N P+ YEF V + N G
Sbjct: 760 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 818
Query: 271 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 323
G P P+ + + P +PS + +++++WEP+ E N N+YY
Sbjct: 819 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 874
Query: 324 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383
+ D + ++ GN+ A T YE+ V+A + G GP S+VV +
Sbjct: 875 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDVVEV 924
Query: 384 FSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI--------KYWK 434
+ AP G V+ + + + N E I N G L G+ +
Sbjct: 925 VT-----DSAPPGPVYKLKVDVYSYRLVLNWQEPILTN--GDLTGYNVIITPVVDETLGD 977
Query: 435 EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494
E+N + + LI P+TKY V+V+A N G+G ++ + P
Sbjct: 978 EEN-------FPLAVDDDLTLIYEASPETKYRVEVLALNTIGDGEKTTEEPTTFLQGRPS 1030
Query: 495 KPPSAVHIKGINPTTVHVTW 514
K PS + GI P + TW
Sbjct: 1031 K-PSGPDVDGIAPDHANFTW 1049
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 21/195 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+T+ C P+P + W KDG + R + GNL+I ++ D G Y C A N
Sbjct: 53 LTLTCRATGIPEPSYYWYKDGALFDVDNNDRASLDGGNLVIESLTTADDGQYQCFANNRL 112
Query: 67 GMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRC-------SAHTEELLDVAYIWT 118
G S+ + L +E P+ I + R L+LRC + + L+ WT
Sbjct: 113 GTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLKLRCGGSPGVPNGNPAPLI----YWT 168
Query: 119 HNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYEC-VVKSTVG--KISTKTTV 174
+ + N IN D G L +N +DA Y C + + VG + + K T+
Sbjct: 169 DAAAKPTPITYNA----RINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTPKVTL 224
Query: 175 IVEGPPGLPGGVQVV 189
+V P + G ++
Sbjct: 225 MVSDLPPVESGASLI 239
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTATNVHGMDE 70
C P P WK+ + SGGR I E+G L+IS V D G Y+C A+N G DE
Sbjct: 258 CIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDDE 317
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG----N 126
+ V P Y+ P T ++ + C +E + A W NG N
Sbjct: 318 FSTVVTVESAP-YFPAPPSDETKGPGESVDIEC--RSEGVPAPAVDWLVNGQPWADFESN 374
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+D N + I+N D+ ++C+
Sbjct: 375 IDTERWTVVTGNPQLATISISNLQTTDSNVFQCIA 409
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 26/179 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-----GGRRKIFENGN-----LLISPVSR 52
G G +V I C E P P W +G R GN + IS +
Sbjct: 340 GPGESVDIECRSEGVPAPAVDWLVNGQPWADFESNIDTERWTVVTGNPQLATISISNLQT 399
Query: 53 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEE 109
DS ++ C ATN + + + L V+ P+ P K+++ + C H E
Sbjct: 400 TDSNVFQCIATNKYKEELTSVVLNVVSIPARIPSFTPVTRKLSVVEDSSAAFTC--HVEG 457
Query: 110 LLDVAYIWTHNGVRIGNMD---LNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
WT G + N D ++EL G + I NA D+G YEC ++++
Sbjct: 458 RPTPTITWTFKGSVLTNGDKYTIDEL--------AGSIVINNALEVDSGAYECTAENSI 508
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 47/188 (25%)
Query: 85 EQLPPKI-----TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 139
+ +PP I +I L L + + + +Y W +G + ++D N+ ++
Sbjct: 32 DDVPPSIVEQPESINGDTRLPLTLTCRATGIPEPSYYWYKDGA-LFDVDNND----RASL 86
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVE----------------- 177
DGG L I + + AD G+Y+C + +G KI T + +
Sbjct: 87 DGGNLVIESLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPL 146
Query: 178 -----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
G PG+P G + I WTD A PIT+ AR N + V +V
Sbjct: 147 KLRCGGSPGVPNG-------NPAPLIYWTDAAAKPTPITYN---ARINQDPEGNLVFSNV 196
Query: 233 IGKEVDRY 240
I + Y
Sbjct: 197 IASDAKGY 204
>gi|390340326|ref|XP_784933.3| PREDICTED: neurofascin-like isoform 4 [Strongylocentrotus purpuratus]
gi|390340328|ref|XP_003725216.1| PREDICTED: neurofascin-like isoform 1 [Strongylocentrotus purpuratus]
gi|390340330|ref|XP_003725217.1| PREDICTED: neurofascin-like isoform 2 [Strongylocentrotus purpuratus]
Length = 1257
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 271/614 (44%), Gaps = 56/614 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTA 62
E + C+ E P P W G+++ +G + I E G+++I+ DSG Y CTA
Sbjct: 433 EDSSAAFTCHVEGRPTPTITWTFKGSVLTNGDKYTIDELAGSIVINNALEVDSGAYECTA 492
Query: 63 TN-VHGMD-ESKGR-LIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWT 118
N + G D E+ G + + G + P +T+ +C + EL W
Sbjct: 493 ENSIDGQDYEATGSATLTVLGKTIITLPPADLTVREDTTATFQCEITYDHELDKPETYWM 552
Query: 119 HNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST-------VGKIST 170
+G R+ N D L I NA F+++G Y C V++T V ++
Sbjct: 553 KDGQRLEANQD-------------NSLRIDNAMFSNSGTYTCFVETTLDESTDTVHSVNA 599
Query: 171 KTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNV 228
++V+G PG P +Q+ + + + + W G N PI +Y I T W + W
Sbjct: 600 SAQLVVKGHPGPPQNLQLRAKEQEFAMDLFWEPGNDNNAPIQYYIIQYDTKWADMHWQFQ 659
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-SPQYNTPADKP 287
+ + RY RK ++ P+ Y+F+VIA NE+G EPS+ +P + P
Sbjct: 660 ANETADDDTSRY--RKVLHLQ----PFVDYQFRVIAVNEIGRSEPSAGVAPTVDPQVAPP 713
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNV 346
+ P + G G + + I W+ + + +Y++ +R + +E F +T+ N
Sbjct: 714 SKNPIEVSGSGTRPESMVIRWQSIHPFYYGGDDFHYEVAYRPRMSSEPFVKDTVYPE-NT 772
Query: 347 GIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
I F Y EYE V+++N GPGPE E+ FS E P +P GV
Sbjct: 773 DANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGPGPEPEIHYGFSGEAAPGASPSGVTVE 832
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
++ +NVTW PI+ E+ G+L G+ + Y N + + ++ ++ LQ
Sbjct: 833 AISANEVNVTWEPID--PEDANGKLGGYNVYY----NVKIASGQDKQMCVKSPCVVGNLQ 886
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
T Y + V A+ NAGEGP S+ +E A PP V+ ++ + + + P
Sbjct: 887 AATTYEITVKAFTNAGEGPASD-VVEVVTDSA---PPGPVYKLKVDVYSYRLVLNWQEPI 942
Query: 521 FEEEPIIGYKVRVWE-VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ GY V + VD+ + + + V + L I + SP +Y + VLA + GD
Sbjct: 943 LTNGDLTGYNVIITPVVDETLGDEENFPLAVDDDLTL-IYEASPETKYRVEVLALNTIGD 1001
Query: 580 G-RMSSPAITFQMG 592
G + + TF G
Sbjct: 1002 GEKTTEEPTTFLQG 1015
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 131/320 (40%), Gaps = 47/320 (14%)
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGY 270
HY++ R +S F V + V + D TG + I N P+ YEF V + N G
Sbjct: 748 HYEVAYRPRMSSEPF-VKDTVYPENTDANPTGIIQNFIVNARKPYEEYEFSVRSMNSGGP 806
Query: 271 GEPSSPSPQYN---TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYY 323
G P P+ + + P +PS + +++++WEP+ E N N+YY
Sbjct: 807 G----PEPEIHYGFSGEAAPGASPSGVTVEAISANEVNVTWEPIDPEDANGKLGGYNVYY 862
Query: 324 KIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383
+ D + ++ GN+ A T YE+ V+A + G GP S+VV +
Sbjct: 863 NVKIASGQDKQMCVKSPCVVGNLQAA----------TTYEITVKAFTNAGEGPASDVVEV 912
Query: 384 FSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI--------KYWK 434
+ AP G V+ + + + N E I N G L G+ +
Sbjct: 913 VT-----DSAPPGPVYKLKVDVYSYRLVLNWQEPILTN--GDLTGYNVIITPVVDETLGD 965
Query: 435 EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494
E+N + + LI P+TKY V+V+A N G+G ++ + P
Sbjct: 966 EEN-------FPLAVDDDLTLIYEASPETKYRVEVLALNTIGDGEKTTEEPTTFLQGRPS 1018
Query: 495 KPPSAVHIKGINPTTVHVTW 514
K PS + GI P + TW
Sbjct: 1019 K-PSGPDVDGIAPDHANFTW 1037
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 21/195 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+T+ C P+P + W KDG + R + GNL+I ++ D G Y C A N
Sbjct: 41 LTLTCRATGIPEPSYYWYKDGALFDVDNNDRASLDGGNLVIESLTTADDGQYQCFANNRL 100
Query: 67 GMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRC-------SAHTEELLDVAYIWT 118
G S+ + L +E P+ I + R L+LRC + + L+ WT
Sbjct: 101 GTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLKLRCGGSPGVPNGNPAPLI----YWT 156
Query: 119 HNGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYEC-VVKSTVG--KISTKTTV 174
+ + N IN D G L +N +DA Y C + + VG + + K T+
Sbjct: 157 DAAAKPTPITYNA----RINQDPEGNLVFSNVIASDAKGYYCQAINNVVGSSQRTPKVTL 212
Query: 175 IVEGPPGLPGGVQVV 189
+V P + G ++
Sbjct: 213 MVSDLPPVESGASLI 227
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTATNVHGMDE 70
C P P WK+ + SGGR I E+G L+IS V D G Y+C A+N G DE
Sbjct: 246 CIAYGYPTPVITWKRGEEQLQSGGRVSIEESGQELVISTVENSDKGTYTCVASNTGGDDE 305
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG----N 126
+ V P Y+ P T ++ + C +E + A W NG N
Sbjct: 306 FSTVVTVESAP-YFPAPPSDETKGPGESVDIEC--RSEGVPAPAVDWLVNGQPWADFESN 362
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+D N + I+N D+ ++C+
Sbjct: 363 IDTERWTVVTGNPQLATISISNLQTTDSNVFQCIA 397
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 26/179 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-----GGRRKIFENGN-----LLISPVSR 52
G G +V I C E P P W +G R GN + IS +
Sbjct: 328 GPGESVDIECRSEGVPAPAVDWLVNGQPWADFESNIDTERWTVVTGNPQLATISISNLQT 387
Query: 53 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---KITIAAHRNLQLRCSAHTEE 109
DS ++ C ATN + + + L V+ P+ P K+++ + C H E
Sbjct: 388 TDSNVFQCIATNKYKEELTSVVLNVVSIPARIPSFTPVTRKLSVVEDSSAAFTC--HVEG 445
Query: 110 LLDVAYIWTHNGVRIGNMD---LNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
WT G + N D ++EL G + I NA D+G YEC ++++
Sbjct: 446 RPTPTITWTFKGSVLTNGDKYTIDEL--------AGSIVINNALEVDSGAYECTAENSI 496
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 45/187 (24%)
Query: 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID 140
PS EQ P I L L C A + + +Y W +G + ++D N+ ++D
Sbjct: 24 PSIVEQ-PESINGDTRLPLTLTCRATG--IPEPSYYWYKDGA-LFDVDNND----RASLD 75
Query: 141 GGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVE------------------ 177
GG L I + + AD G+Y+C + +G KI T + +
Sbjct: 76 GGNLVIESLTTADDGQYQCFANNRLGTAMSQKIMTSLAFMDQFENTAPETIQVDQGRPLK 135
Query: 178 ----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
G PG+P G + I WTD A PIT+ AR N + V +VI
Sbjct: 136 LRCGGSPGVPNG-------NPAPLIYWTDAAAKPTPITYN---ARINQDPEGNLVFSNVI 185
Query: 234 GKEVDRY 240
+ Y
Sbjct: 186 ASDAKGY 192
>gi|432092484|gb|ELK25099.1| Neural cell adhesion molecule L1-like protein [Myotis davidii]
Length = 1190
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/585 (24%), Positives = 254/585 (43%), Gaps = 46/585 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K D G R + NG L I + +D+G YSC
Sbjct: 438 GSSAFLLCEFFASPQAMVSWQKADAARPLEGPRYHVHTNGTLQIREATVEDAGAYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + + P + L+L C + + L + W+ G
Sbjct: 498 NAQGKTAVTASLDIRNA-TRLQVSPRDPRVPRSHTLELHCESECDPHLKPSLRLTWSKGG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ N E I IDG L I+N + D G Y C + + + +T V V P
Sbjct: 557 ---AAFETNGTEDGRILIDGAHLTISNLTLEDQGVYTCSAHTALDSAANETHVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P +++ E S + W G ++ I+ Y + N W ++ G
Sbjct: 614 PPENLRLSERQNRSVRLTWDAGDSHNSNISGYVVEFEGNREEPGRWEQLAAVPGG----- 668
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
E ++ L P+ Y+F+VIA NE+G PS PS + TP P + P +
Sbjct: 669 -----ETTVLLTLAPYVRYQFRVIAANEVGRSRPSRPSEHHETPPAAPDKNPQNVRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ E++ ET++E+ +R+ +
Sbjct: 724 QPKEMVIRWEPLKSTEQNGPGLEYRVAWKPLGALGEWEEETVREHS------LRVMTPAI 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y YEV+VQA+N +G GP+ + V + S ED P AP NST + W + +
Sbjct: 778 YAPYEVQVQALNHLGAGPQPQSVVLHSGEDYPDAAPVIHGVDVVNSTLAKINWWKTKSLA 837
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+ GR + P+E ++ R+ ++ L +++++ V+A+N G G
Sbjct: 838 D---GRSL-----------PKEVSILRFP-GQRSSGMLPALDAFSEFHLTVLAFNAKGAG 882
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD- 537
PESE Y+ +T P++ P+ + + ++ T + W P + GY ++ ++
Sbjct: 883 PESEPYVFQTPEGVPEQ-PTFLKVIKVDKDTATLAWG--PPRKLNGNLTGYLLQYQIIND 939
Query: 538 -QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++ ND I + + +L+ +Y V A ++ G G+
Sbjct: 940 TDEIGELNDVSITAPSKPSWRLSNLNATTKYKFYVRACTSRGCGK 984
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 29/240 (12%)
Query: 359 YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
Y Y+ +V A N+VG P SE A P PQ V + + + W P++
Sbjct: 679 YVRYQFRVIAANEVGRSRPSRPSEHHETPPA--APDKNPQNVRVQASQPKEMVIRWEPLK 736
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYN 473
+N G + +R+ WK P + T R +L V + P Y V+V A N
Sbjct: 737 STEQNGPG--LEYRVA-WK---PLGALGEWEEETVREHSLRV-MTPAIYAPYEVQVQALN 789
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
+ G GP+ + + + P P + +N T + W +K +
Sbjct: 790 HLGAGPQPQSVVLHSGEDYPDAAPVIHGVDVVNSTLAKINW--------------WKTKS 835
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
+ + + + G + L +H+ VLAF+ G G S P + FQ E
Sbjct: 836 LADGRSLPKEVSILRFPGQRSSGMLPALDAFSEFHLTVLAFNAKGAGPESEPYV-FQTPE 894
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 67/178 (37%), Gaps = 20/178 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C E P P+ W+K G + G K L I VS +D G Y CTA N
Sbjct: 255 GDTLVLECFAEGLPTPQVGWEKVGGDLPKGRETKENYGKMLKIENVSYEDKGNYRCTANN 314
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVR 123
G+ + V P + ++ P+ + + R+ L C A E + W NG+
Sbjct: 315 FLGVATHDFHVTVEEPPRWTKK--PQSGVYSTRSSGILLCEAEGEP--EPVIRWRVNGIP 370
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFAD-----AGEYECVVKSTVGKISTKTTVIV 176
I E P G ++ SF D Y+C + G I V V
Sbjct: 371 IE-------ENP---FAGDVVSPGEVSFTDLQPNHTAVYQCEASNAHGTILANANVDV 418
>gi|222352127|ref|NP_001138424.1| protein sidekick-2 precursor [Homo sapiens]
gi|296452966|sp|Q58EX2.3|SDK2_HUMAN RecName: Full=Protein sidekick-2; Flags: Precursor
Length = 2172
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1168
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1226
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1227 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1286
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1287 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1336
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 1174
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1175 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1234
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1235 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCQAKGVPPPSI--------TWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAG 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 326 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|344237574|gb|EGV93677.1| Neuronal cell adhesion molecule [Cricetulus griseus]
Length = 1048
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 211/482 (43%), Gaps = 48/482 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 351 CAFFGSPMPTIEWFK--GTKGSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 408
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 409 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECKVKHDHTLIPTIMWLKDNGELPNDE 467
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ID L +T+ D G Y C +T+ ++S + V V++
Sbjct: 468 -------RFSIDKDHLVVTDVGDDDGGVYTCAANTTLDRVSASAVLRV---------VEL 511
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I W + +E +
Sbjct: 512 TNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMREAGIWHHQAE----------VSGTQT 561
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G G + +L I
Sbjct: 562 TAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEGLGTEPDNLVI 621
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 622 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 676
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE V S ED+P VAP V NST V W+P+ L +++RG L
Sbjct: 677 VQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVHVNVVNSTLAEVHWDPVPL--KSVRGHL 734
Query: 426 IGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
G+RI YWK + ++ + ++ ++ GLQP + Y + V N GEGP
Sbjct: 735 QGYRIYYWKAQGSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYELNVRVVNGKGEGP 794
Query: 480 ES 481
S
Sbjct: 795 AS 796
>gi|225000048|gb|AAI72275.1| SDK2 protein [synthetic construct]
gi|225000918|gb|AAI72562.1| SDK2 protein [synthetic construct]
Length = 1851
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 94 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 153
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 154 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 212
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 213 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 267
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 268 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 321
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 322 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 378
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 379 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 438
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 439 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 493
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 494 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 551
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 552 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 608
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 609 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 664
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1081 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1139
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1247
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1248 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1307
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1308 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1365
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1366 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1421
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1422 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1478
Query: 570 RVLA 573
R+ A
Sbjct: 1479 RIRA 1482
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 181/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 626 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGPPTNLG 679
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 680 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----R 733
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 734 SMEVPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSL 792
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + ++ +TL + R+ ++
Sbjct: 793 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDL 844
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 845 EEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EV 902
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 903 PEADRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 962
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 963 DGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1015
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 735 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 794
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 795 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 853
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 854 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 913
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 914 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 971
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 771 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 828
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 880
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 939
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 940 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 997
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 998 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1053
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1054 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1111
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1112 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1163
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1274 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1332
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1333 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1387
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1388 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1442
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1443 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1500
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1501 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1558
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1559 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1511 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1567
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1568 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1601
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 5 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 64
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 121
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 122 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
>gi|332848956|ref|XP_511658.3| PREDICTED: protein sidekick-2 [Pan troglodytes]
Length = 2172
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1168
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1226
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1227 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1286
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1287 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1336
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1175
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1176 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGY 1235
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1236 KVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNAAG 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 326 VDIPCRAKGVPPPSITWYKDAAVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|119609532|gb|EAW89126.1| sidekick homolog 2 (chicken), isoform CRA_a [Homo sapiens]
Length = 2086
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 284 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 343
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 344 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 402
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 403 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 457
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 458 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 511
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 512 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 568
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 569 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 628
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 629 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 684 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 741
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 742 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 798
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 799 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 854
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1497
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1498 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1555
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1556 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1611
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1612 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1668
Query: 570 RVLA 573
R+ A
Sbjct: 1669 RIRA 1672
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1095
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1096 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1155
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1156 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1205
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 925 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 984
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 985 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 1043
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1044 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1103
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1104 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1161
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1130 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1187
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1188 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1243
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1244 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1301
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1302 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1353
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1464 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1522
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1523 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1577
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1578 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1632
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1633 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1690
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1691 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1748
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1749 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1784
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1701 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1757
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1758 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1791
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 195 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 254
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 255 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 311
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 312 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K +WKKDG ++ SGG N L I + D+G Y C A
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLL-SGGISD--HNRRLTIPNPTGSDAGYYECEAVLR 158
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S R L VL P + ++ IT + + + C A + + + W +
Sbjct: 159 SSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQA--KGVPPPSITWYKDAA 216
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ L N DGG L+I+ D G ++C ++ G++ T T + V
Sbjct: 217 VVEVEKLTRFRQRN---DGG-LQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 33 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 87
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 88 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 142 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 198
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 199 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 257
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 258 YEFKVIAGNELG 269
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|410899487|ref|XP_003963228.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu rubripes]
Length = 1269
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 251/595 (42%), Gaps = 52/595 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-- 60
EG + C +PKPK W+ +++ + R + NG L I+ VS DD GIY+C
Sbjct: 452 EGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLV 511
Query: 61 --TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-W 117
+ +V+ E R ++L P P K I C T+ L + W
Sbjct: 512 QGSNISVNAEVEVLNRTVILSPPQALRLQPGKTAI-------FTCLYVTDPKLSSPLLQW 564
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
N +I ++ T DG L I+N D G Y C + + + + +T+ +
Sbjct: 565 RKNDQKIFESHSDKKYT----FDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLC 620
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEH 231
P P +QV T+ WT G N PI Y + + W
Sbjct: 621 DRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGW---------- 670
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+E+ R K+ + L P+ +Y F+VIA N+ G +PS S Y TPAD P P
Sbjct: 671 ---EELKRVAADKK-HVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNP 726
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ L I+WE + + N P+ Y + WR+ + + +EY +V
Sbjct: 727 EDVRSESTDPDTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIV 784
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
F + +E+KVQA+N G GPE + + +S ED+P AP + NST I VTW
Sbjct: 785 TDVQNF--SAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTW 842
Query: 412 NPIELIRENIRGRLIGHRI----KYWKEDNPEETAVYYLSRTTRN--WALIVGLQPDTKY 465
++ +E +RG L+G++I + + +E + +T N I L+P Y
Sbjct: 843 AAVD--KETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRPYCHY 900
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+ + A+N+ GEGP SE+ T P P S ++ +P+ +T + PS
Sbjct: 901 DLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMS---MQMTSPSESEITLHWTPPSKPNGI 957
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY ++ ++ D + I + L Y ++A + G G
Sbjct: 958 LLGYSLQYRKMQSDDNPLQVVDIASPEITHLTLKGLDRHSHYQFLLMARTAAGKG 1012
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 142/620 (22%), Positives = 242/620 (39%), Gaps = 102/620 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCT 61
G V + C + P P W +G + + RR + E+G+L++ V D+ IY C
Sbjct: 358 GETVKLDCQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQ 417
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDV 113
A+N HG I+ + Y +LPP+I T + L C V
Sbjct: 418 ASNKHGT-------ILANTNVYVIELPPQILTENGNTYTFVEGQKALLECETFGSPKPKV 470
Query: 114 AYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W + + + L P +N+ G LEI N S D G Y C+V+ + ++ +
Sbjct: 471 T--WESSSISL------LLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEV 522
Query: 173 -----TVIVEGPPGL---PG------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218
TVI+ P L PG + V + +S +QW N + I +
Sbjct: 523 EVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSPLLQWRK---NDQKIFESHSDKK 579
Query: 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
++ +S G E Y ++I +L E SS
Sbjct: 580 YTFDGPGLIISNVEPGDE-------------------GVYTCQIIT--KLDMVEASSTL- 617
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
T D+P P + K ++++W P + N+P + Y + EF+ +
Sbjct: 618 ---TLCDRP-DPPVHLQVTNAKHRVVTLNW--TPGDDNNSPILEYVV--------EFEDQ 663
Query: 339 TLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQ 391
+KE G + V + Y Y +V AIND G S++ ++ + D P
Sbjct: 664 DMKENGWEELKRVAADKKHVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPD 723
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAVYYLSR 448
P+ V S + + +TW E+ + N G + + W+ P+ Y ++
Sbjct: 724 SNPEDVRSESTDPDTLVITWE--EMDKRNFNGPDFKYLV-MWRRVVGSGPDWHEEYTIAP 780
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
++ +Q + + +KV A N G GPE + + + P + P + + N T
Sbjct: 781 P----FIVTDVQNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENST 836
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA----NDTIIPVG-NTLDADIVDLSP 563
T+ VTW V ++GYK+ + SRA N ++ G N I +L P
Sbjct: 837 TIRVTWAAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRP 896
Query: 564 GKRYHMRVLAFSNGGDGRMS 583
Y + + AF++ G+G +S
Sbjct: 897 YCHYDLAISAFNSKGEGPLS 916
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
+A G + + C + P PK W +KDG + S + +F+ L + +S D G Y
Sbjct: 264 HALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNISESDGGEYQ 322
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CTA NV G + V P Y+ P A ++L C A + + WT
Sbjct: 323 CTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGIPSPTITWTV 379
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + LE + G L + + F D Y+C + G I T V ++E
Sbjct: 380 NGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIEL 436
Query: 179 PPGL 182
PP +
Sbjct: 437 PPQI 440
>gi|426346933|ref|XP_004041123.1| PREDICTED: protein sidekick-2 [Gorilla gorilla gorilla]
Length = 2172
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 182/424 (42%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYVVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 178/414 (42%), Gaps = 41/414 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 358
W PLP + N ++ YKI + R + S +++ R+ E+
Sbjct: 1117 WMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLSHVVQD---------RVEREYTIEDLEE 1167
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1168 WTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPE 1225
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1226 ADRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDG 1285
Query: 479 -PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1286 SPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPATPNGIILAYQI 1336
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D + + + I L+ T+Y V+V
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLSHVVQDRVEREYTIEDLEEWTEYRVQV 1175
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1176 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGY 1235
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1236 KVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKMLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + L+P++ Y +
Sbjct: 1319 LIWQPPATPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATSLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + +VD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPG--GRWALHSASVSHNASSFVVDRLKPFTSYKFRVKATNDIGD 1484
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYVVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLTRFRQRSDGGLQVSGLVPDDTGMFQCFARNAAG 387
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L +S + DD+G++ C A N
Sbjct: 326 VDIPCRAKGVPPPSITWYKDAAVVEVEKLTRFRQRSDGGLQVSGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|119609534|gb|EAW89128.1| sidekick homolog 2 (chicken), isoform CRA_c [Homo sapiens]
Length = 2041
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 284 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 343
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 344 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 402
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 403 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 457
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 458 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 511
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 512 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 568
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 569 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 628
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 629 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 684 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 741
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 742 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 798
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 799 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 854
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1497
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1498 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1555
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1556 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1611
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1612 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1668
Query: 570 RVLA 573
R+ A
Sbjct: 1669 RIRA 1672
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1095
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1096 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1155
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1156 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1205
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 925 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 984
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 985 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 1043
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1044 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1103
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1104 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1161
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1130 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1187
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1188 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1243
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1244 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1301
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1302 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1353
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1464 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1522
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1523 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1577
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1578 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1632
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1633 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1690
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1691 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1748
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1749 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1784
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1701 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1757
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1758 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1791
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 195 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 254
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 255 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 311
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 312 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K +WKKDG ++ SGG N L I + D+G Y C A
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLL-SGGISD--HNRRLTIPNPTGSDAGYYECEAVLR 158
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S R L VL P + ++ IT + + + C A + + + W +
Sbjct: 159 SSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQA--KGVPPPSITWYKDAA 216
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ L N DGG L+I+ D G ++C ++ G++ T T + V
Sbjct: 217 VVEVEKLTRFRQRN---DGG-LQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 33 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 87
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 88 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 142 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 198
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 199 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 257
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 258 YEFKVIAGNELG 269
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|397484478|ref|XP_003813403.1| PREDICTED: protein sidekick-2 [Pan paniscus]
Length = 2172
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 181/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ + +TL + + R+ E+ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGRGKTLSQ-----VVQDRVEREYTIEDLEEW 1168
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1226
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1227 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1286
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1287 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1336
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + I L+ T+Y V+V
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGRGKTLSQVVQDRVEREYTIEDLEEWTEYRVQV 1175
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1176 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGY 1235
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1236 KVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGRGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
V+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -QVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTSSDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNAAG 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 326 VDIPCRAKGVPPPSITWYKDAAVVEVEKLTRFRQRSDGGLQISGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|395533097|ref|XP_003768600.1| PREDICTED: protein sidekick-2 [Sarcophilus harrisii]
Length = 2153
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 255/598 (42%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 397 DGMSVVLACETSGAPRPAITWQKGERILASGSIQLPRFTLLESGSLLISPTRISDAGSYT 456
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ LIV + P ++ + C + + + YIW
Sbjct: 457 CLATNSRGVDEASADLIVW-ARTRITMAPQDQSVIKGTKAFMTCGVTHDPSVSIRYIWEK 515
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I + P + +D G L I+ D G Y C V S G S + V
Sbjct: 516 DGAVISVDSI-----PRMRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSKSAYLRVRQ 570
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + S + W P+ HY + N N+ W V+
Sbjct: 571 LPHAPEHPMATLSTAERRSINLTWAKPFDGNSPLIHYVLEMSEN-NAPW-----TVLLPS 624
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 625 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 679
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I F +Q + N + + +
Sbjct: 680 IASGRTNQSIMIQWQPPPESHQNGILKGYIIRFCLAGLPVGYQ---FRNITNADVNNLLL 736
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE+ V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 737 EELIIWTNYEISVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVRAEAINSTTIRFTWNA 796
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T Y+ V+
Sbjct: 797 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTDYFTSVL 854
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + GY+
Sbjct: 855 CFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNEILDTSLKVSWQ--EPGERNGILTGYR 911
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 912 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 967
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 198/472 (41%), Gaps = 60/472 (12%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 929 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 985
Query: 191 VHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + +A W + H + E D +
Sbjct: 986 IGPRSVTLQFRPGYDGKTSISRWLVEAQVAVVGEGEEWLLI--HQLTNEPDA----RSME 1039
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ N L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1040 VPN-LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1098
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K ++ +TL + RI E+ +
Sbjct: 1099 WMPLPEMEYNGNPESVGYKI---KYTRSDGHGKTLSH-----VVHDRIEREYTIEDLEEW 1150
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S++V + E +P P V + S+++ V WN I
Sbjct: 1151 TEYRVQVQAFNAIGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADR 1210
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
N G ++G+++ Y ++D+ + + + + A + GL Y ++V+A+ G+G
Sbjct: 1211 N--GLVLGYKVVYKEKDSDTQPQFWLVEGNSSLSAQLTGLGRYVLYEIQVLAFTRIGDGT 1268
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S LERT P PP + + PT+V + W+ PS I+ Y++
Sbjct: 1269 PSSPPILERTLDDVP-GPPMGILFPEVRPTSVRLIWQ--PPSAPNGIILAYQI------- 1318
Query: 539 DMSRANDTIIPVGNTLDADIVD----------LSPGKRYHMRVLAFSNGGDG 580
R N T NT +++ L P Y R++A + G G
Sbjct: 1319 -THRLNTT---TANTASVEVLTPSARQYTATGLKPESIYLFRIMAQTRKGWG 1366
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 184/455 (40%), Gaps = 48/455 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P G+ EV TS + W + I Y+I R N +T S V+ +
Sbjct: 1283 PGPPMGILFPEVRPTSVRLIWQPPSAPNGIILAYQITHRLN-TTTANTASVEVLTPSARQ 1341
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 297
YT L P S Y F+++A G+GE + D+P Q PS+ I
Sbjct: 1342 YTATG-------LKPESIYLFRIMAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVINQE 1393
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
K + +SWEP +P YY I R+ + ++ + N VV F
Sbjct: 1394 NVKARSVLLSWEP--GSDGLSPVRYYTIQSRELPNGKWALHSSSVTHNATSFVVDRLKPF 1451
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
T Y+ +V++ ND+G SE + + P+ AP + +T++ ++W P
Sbjct: 1452 --TSYKFRVKSTNDIGDSEYSEESESLTTLQAAPEEAPTILSVTPHTTTSVLISWQPPA- 1508
Query: 417 IRENIRGRLIGHRIKYWKE-------------DNP-----EETAVYY---LSRTTRNWAL 455
+ I G L+G RI+Y + +NP E T++Y LSR +
Sbjct: 1509 -EDKINGILLGFRIRYRELLYEGLRGFTMRNINNPSTKWAELTSMYAVRNLSRPSLTQYE 1567
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L +Y +++ YN GEGP S P PP V + G T + VTW
Sbjct: 1568 LDNLSKHKRYEIRMSVYNAVGEGPSSSPQEVFVGEAVPTAPPQNVAVHGATATQLDVTWE 1627
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMS--RANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ I GYK+ WE + S R +P + +L+ Y + V A
Sbjct: 1628 PPPLEAQNGDIQGYKIYFWEAQRRNSTERLKTLFLPENG---VKLKNLTGYTAYLVSVAA 1684
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSAS 608
F+ GDG S+P+ G ++ +P++ S
Sbjct: 1685 FNAAGDGPRSAPS----QGRTQQAAPSAPSMVKFS 1715
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 874 EDVPGPVGHLSFNEILDTSLKVSWQEPGERNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 932
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 933 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 982
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + +P+
Sbjct: 983 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVAVVGEGEEWLLIHQLTNEPDARSMEVPN 1042
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
YT Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1043 LNPYTFYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPL 1102
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D +T + + I L+ T+Y V+V A+N
Sbjct: 1103 PEMEYNGNPESVGYKIKYTRSDGHGKTLSHVVHDRIEREYTIEDLEEWTEYRVQVQAFNA 1162
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W + + ++GYKV
Sbjct: 1163 IGTGPWSQIVVGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVVYK 1222
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D ++ ++ ++L A + L Y ++VLAF+ GDG SSP I
Sbjct: 1223 EKDSD-TQPQFWLVEGNSSLSAQLTGLGRYVLYEIQVLAFTRIGDGTPSSPPI 1274
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 133/339 (39%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G SSP + A P P + G L ++WEP P E QN
Sbjct: 1577 YEIRMSVYNAVGEGPSSSPQEVFVGEA-VPTAPPQNVAVHGATATQLDVTWEPPPLEAQN 1635
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1636 GDIQGYKIYFWEAQRRNSTERLKTLFLPENG------VKLKNLTGYTAYLVSVAAFNAAG 1689
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP V +T++NV+W P G L G+R+ Y
Sbjct: 1690 DGPRSAPSQGRTQQAAPS-APSMVKFSELTTTSVNVSWEPPLFPN----GVLEGYRLIYE 1744
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A GPE E + T
Sbjct: 1745 PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANIT-TGP 1802
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1803 GEGAPGPPGVPIIIRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPK 1860
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L G Y RV+A ++ G G SSP+
Sbjct: 1861 EVTSYTFSMDI--LKHGVSYDFRVIAVNDYGYGTPSSPS 1897
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD +I R ++ +G+L IS + DD+G++ C A N
Sbjct: 308 VDIPCQAKGVPSPITTWYKDAAVIDVKKLSRFRLHGDGSLQISGLVPDDTGMFQCFARNS 367
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 368 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 423
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G +IV
Sbjct: 424 -LASGSIQLPRFTLLESGSLLISPTRISDAGSYTCLATNSRGVDEASADLIV 474
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
+ ++ I W+ G PIT Y I AR + W ++ I KEV YT + +
Sbjct: 1818 YSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-----I 1871
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
L +Y+F+VIA N+ GYG PSSPS + PA K
Sbjct: 1872 LKHGVSYDFRVIAVNDYGYGTPSSPS--QSVPAQK 1904
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 131/615 (21%), Positives = 218/615 (35%), Gaps = 105/615 (17%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I + L+I D+G Y A N D + I
Sbjct: 123 PQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 182
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I +A + + C A+ L+ + IW +GV +
Sbjct: 183 LTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWKKDGVPVSG 242
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 183
I+ L I N ++ G YEC + S+V + + V PP
Sbjct: 243 ---------GISDHNRRLTILNPKGSNTGYYECEAVLRSSSVPSVVRGAVLSVLEPPQF- 292
Query: 184 GGVQVVEVHKTSATIQWTDGATNGR----PITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
++ E H T+ + D + PIT TW+ + + K++ R
Sbjct: 293 --IKEPERHITAEMEKVVDIPCQAKGVPSPIT------------TWYKDAAVIDVKKLSR 338
Query: 240 YTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT-PADKPYQAP 291
+ + S++ + LVP T F+ A N G Y +S +P P D
Sbjct: 339 FRLHGDGSLQISGLVPDDTGMFQCFARNSAGEVQTSTYLAVTSIAPNITRGPLD------ 392
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDTEFQSETLKEYGN 345
S + G + S P P I W+K + TL E G+
Sbjct: 393 STVIDGMSVVLACETSGAPRP-----------AITWQKGERILASGSIQLPRFTLLESGS 441
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP--QGVFSRGFN 403
+ I+ RI YT + ++ E+ I A +AP Q V
Sbjct: 442 LLISPTRISDAGSYTCLATNSRGVD------EASADLIVWARTRITMAPQDQSVIKGTKA 495
Query: 404 STAINVTWNP---IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
VT +P I I E + I + D + ++S+T W+ +G
Sbjct: 496 FMTCGVTHDPSVSIRYIWEKDGAVISVDSIPRMRLD---KNGSLHISQT---WSGDIG-- 547
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLE-RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Y +V++ AG YL R AP+ P + ++++TW P
Sbjct: 548 ---TYTCRVLS---AGGNDSKSAYLRVRQLPHAPEHP--MATLSTAERRSINLTW--AKP 597
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
P+I Y + + E + + ++ P ++ + L P + Y R+ A ++ G
Sbjct: 598 FDGNSPLIHYVLEMSENNAPWTVLLPSVDPEATSV--MVKGLVPARSYQFRLCAVNDVGK 655
Query: 580 GRMSSPAITFQMGEE 594
G+ S + EE
Sbjct: 656 GQFSKDTERVSLPEE 670
>gi|443700552|gb|ELT99433.1| hypothetical protein CAPTEDRAFT_120325, partial [Capitella teleta]
Length = 1186
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 174/612 (28%), Positives = 268/612 (43%), Gaps = 42/612 (6%)
Query: 7 NVTIFCNPEAAPKPKFVWKK---DGN-------IIGSGGRRKIFENGNLLISPVSRDDSG 56
++T+ C AP P+ WK+ D + + G RK +N +L I VS DD G
Sbjct: 358 DITLICEAFGAPDPEITWKRWREDDSGQKYLELVPGPPKFRKNQKN-HLTIIGVSSDDQG 416
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--VA 114
Y C A+N G ++ G LIV + +E+ P T+ A ++ +C+A T+EL D +
Sbjct: 417 TYECYASNKFGDVDASGDLIVRERTTIHER-PHDATVNASTDVIFKCNATTDELEDHNLK 475
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
Y W NG I D ++N++ L IT A D+ EY CV + + S T+
Sbjct: 476 YEWRKNGRLI---DFQREGRLSMNMNDHSLIITGAQVEDSAEYTCVAGNGLDNDSISATL 532
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
V+ P P V + +A I WT G+ N PI+ Y + +N+++ E+ G
Sbjct: 533 KVKDVPDPPTDVNMRSCGSNTAEITWTPGSDNNVPISEYIVF----YNTSFDAAGEYTEG 588
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS-PSPQYNTPADKPYQAPSR 293
VD T + S + L PW+ Y F V A + +G S+ S TP PY P+
Sbjct: 589 ARVDAST---QLSAKVKLSPWAEYTFHVQAVSAMGKSPRSAFTSSTCITPQKIPYTNPTG 645
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ L I WEP+P+ + N Y + +R+KN Q E E + + +
Sbjct: 646 VCTESRAPDQLVIVWEPMPQMEHNGEGFAYFVSYRRKNYPGAQ-EISTEVTDWRQTELVV 704
Query: 354 PSEFYYTEYEVKVQAINDVGPGPES--EVVTIFSAEDMPQVAPQ--GVFSRGFNSTAINV 409
++ ++EYE+ V+A N G P E T +S ED+P V+ Q V NST+
Sbjct: 705 GNQEIFSEYEISVRAKNSKGFSPPGTVEYKTGYSGEDVPLVSAQNFAVDESSINSTSARF 764
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG---LQPDTKYY 466
W+P+ IRG G+ E NP V + R R + L P ++
Sbjct: 765 VWDPVTEDPAMIRGFFKGYESVIINEWNPCPALVGSMRRRRRASQVSAHTNELWPYSRIT 824
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT-TVHVTWRYVSPSFEEEP 525
V+ N GP S+ T P+ PS V + T + H+ + P F
Sbjct: 825 AGVLVANGGKTGPLSDTITFDT----PEGLPSIVRNFRVTETGSHHLKMEWDPPLFANGV 880
Query: 526 IIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
++GY V R E D+ + N+ + L ++L P RY + + AF+ G GR
Sbjct: 881 LLGYVVGFRTGEGDEPLGDMNELDVSNPLQLYKKALNLEPETRYLVYIWAFT--GKGRGP 938
Query: 584 SPAITFQMGEEK 595
+ Q G EK
Sbjct: 939 RESDEAQTGPEK 950
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 179/488 (36%), Gaps = 27/488 (5%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR--RKIFENGNLLISPVSRDDSGIY 58
++ E N C +P+P+ +W +G + + R R+I ++ ++ D+ +
Sbjct: 258 HSSEEENAEFLCKAGGSPQPEILWSINGIAVENLPRDSRRIVTQNSITYRNLTSSDAQVI 317
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA-HRNLQLRCSAHTEELLDVAYI- 116
C ATN HG + L VL + + P +T AA +++ L C A ++ +
Sbjct: 318 QCNATNKHGYIFANAYLNVLAEAPSFIRAPDAVTKAAVSQDITLICEAFGAPDPEITWKR 377
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
W + ++L L I S D G YEC + G + +IV
Sbjct: 378 WREDDSGQKYLELVPGPPKFRKNQKNHLTIIGVSSDDQGTYECYASNKFGDVDASGDLIV 437
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ V+ ++ I + T+ + K R N F +
Sbjct: 438 RERTTIHERPHDATVNASTDVIFKCNATTDELEDHNLKYEWRKNGRLIDFQREGRLSMNM 497
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
D A +E+ + E+ +AGN L S+ + P D P R G
Sbjct: 498 NDHSLIITGAQVED------SAEYTCVAGNGLDNDSISATLKVKDVP-DPPTDVNMRSCG 550
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT--EFQSETLKEYGNVGIAVVRIP 354
I+W P N P Y +F+ D E+ + A V++
Sbjct: 551 S----NTAEITW--TPGSDNNVPISEYIVFYNTSFDAAGEYTEGARVDASTQLSAKVKLS 604
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVV--TIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ EY VQA++ +G P S T + + +P P GV + + + W
Sbjct: 605 P---WAEYTFHVQAVSAMGKSPRSAFTSSTCITPQKIPYTNPTGVCTESRAPDQLVIVWE 661
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP-DTKYYVKVMA 471
P+ + N G + + Y +++ P + R L+VG Q ++Y + V A
Sbjct: 662 PMPQMEHN--GEGFAYFVSYRRKNYPGAQEISTEVTDWRQTELVVGNQEIFSEYEISVRA 719
Query: 472 YNNAGEGP 479
N+ G P
Sbjct: 720 KNSKGFSP 727
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 20/185 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-----ENGNLLISPVSRDDSGIYS 59
GG + + C P P+ W++ G+ R F N L+I+ V +D G Y
Sbjct: 167 GGMLRMKCIFSGYPTPRVTWRRLPQ--GTEMPRSHFFPEESANKELVINNVQFEDQGTYE 224
Query: 60 CTATNVHGMDESKGRLIV-LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C+A+N+ G + V + ++ + P + + N + C A ++ +W+
Sbjct: 225 CSASNMDGGSTVSRKFSVRVQSMPFFIEKPMNVHSSEEENAEFLCKAGGSPQPEI--LWS 282
Query: 119 HNGVRIGNM--DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TV 174
NG+ + N+ D + T N + N + +DA +C + G I V
Sbjct: 283 INGIAVENLPRDSRRIVTQN------SITYRNLTSSDAQVIQCNATNKHGYIFANAYLNV 336
Query: 175 IVEGP 179
+ E P
Sbjct: 337 LAEAP 341
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 101/258 (39%), Gaps = 32/258 (12%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA-----INVTWNP 413
Y+ V N GP S+ +T + E +P + R F T + + W+P
Sbjct: 820 YSRITAGVLVANGGKTGPLSDTITFDTPEGLPSIV------RNFRVTETGSHHLKMEWDP 873
Query: 414 IELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G ++G R + D P + +S + + + L+P+T+Y V + A+
Sbjct: 874 PLFANGVLLGYVVGFRTG--EGDEPLGDMNELDVSNPLQLYKKALNLEPETRYLVYIWAF 931
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS--PSFEEE----PI 526
G GP + KAP P G P V + VS P+ + E P
Sbjct: 932 TGKGRGPRESDEAQTGPEKAPDAP-------GFGPFDVGDDFVNVSFVPTADGEDVDNPG 984
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
+ + +D ++ D P ++ L PG++Y R++A NG S +
Sbjct: 985 SEFYIEYRPSGEDEWQSTD---PEKEHNWVNVTGLEPGQQYEFRIVA-RNGAKQETRSKS 1040
Query: 587 ITFQMG-EEKEFKSGSPA 603
T +G + KE + S A
Sbjct: 1041 KTILVGPDTKEVREASVA 1058
>gi|62024162|gb|AAH66363.1| SDK2 protein, partial [Homo sapiens]
Length = 1805
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 48 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 107
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 108 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 166
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 167 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 221
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 222 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 275
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 276 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 332
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 333 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 392
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 393 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 447
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 448 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 505
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 506 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 562
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 563 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 618
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 182/424 (42%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1035 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1093
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1094 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1141
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + L+ N G +
Sbjct: 1142 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFMLRGINNPGATWAELT 1201
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1202 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1261
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1262 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1319
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1320 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1375
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1376 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1432
Query: 570 RVLA 573
R+ A
Sbjct: 1433 RIRA 1436
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 580 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 636
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 637 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 690
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 691 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 749
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 750 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 801
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 802 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 859
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 860 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 919
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 920 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 969
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 689 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 748
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 749 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 807
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 808 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 867
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 868 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 925
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 725 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 782
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 783 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 834
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 835 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 893
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 894 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 951
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 952 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1007
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1008 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1065
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1066 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1117
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1228 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1286
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1287 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1341
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1342 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1396
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1397 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1454
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1455 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1512
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1513 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1548
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1465 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1521
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1522 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1555
>gi|403280637|ref|XP_003931822.1| PREDICTED: protein sidekick-2 [Saimiri boliviensis boliviensis]
Length = 2172
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 263/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLG-MESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + W P+ Y + N N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLPS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYVIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSDILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 184/425 (43%), Gaps = 53/425 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P Q +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPVAQQE-DVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W +++ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRQNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSSPTQGQTQQAAPSA-PSSVQFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
+W +P F + GY++ V+E VD +S+ + + L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVD-GVSKIVTVDVKGTSPLWLKVKDLAEGVTYR 1798
Query: 569 MRVLA 573
R+ A
Sbjct: 1799 FRIRA 1803
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 178/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W V H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYNGKTSISRWLVEAQVGVVGEGEEWLLV--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1168
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ +
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADR 1228
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
N G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1229 N--GLVLGYKVMYKEKDSDAQPRFWLVEGNSSRSAQLTGLGKYVLYEVRVLAFTRIGDGR 1286
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1287 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1336
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1175
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1176 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGY 1235
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y +RVLAF+ GDGR S P I
Sbjct: 1236 KVMYKEKDSD-AQPRFWLVEGNSSRSAQLTGLGKYVLYEVRVLAFTRIGDGRPSHPPI 1292
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVRVLAFTRIGDGRPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPVAQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 136/338 (40%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSSPTQGQTQQAAPS-APSSVQFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + T+ W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGTSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 110/281 (39%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GP----SYYEQLPPKIT--IAAHRNLQLRCSAHTEELLD 112
N D + I L GP + +PPK T +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLAVENVGGPADPIAATIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I +W+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------SWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAG 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 326 VDIPCRAKGVPPPSISWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNS 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|119609533|gb|EAW89127.1| sidekick homolog 2 (chicken), isoform CRA_b [Homo sapiens]
Length = 1801
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 39 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 98
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 99 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 157
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 158 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 212
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 213 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 266
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 267 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 323
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 324 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 383
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 384 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 438
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 439 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 496
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 497 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 553
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 554 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 609
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1026 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1084
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1085 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1132
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1133 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1192
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1193 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1252
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1253 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1310
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1311 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1366
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1367 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1423
Query: 570 RVLA 573
R+ A
Sbjct: 1424 RIRA 1427
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 571 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 627
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 628 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 681
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 682 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 740
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 741 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 792
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 793 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 850
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 851 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 910
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 911 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 960
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 680 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 739
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 740 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 798
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 799 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 858
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 859 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 916
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 716 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 773
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 774 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 825
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 826 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 884
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 885 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 942
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 943 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 998
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 999 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1056
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1057 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1108
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1219 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1277
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1278 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1332
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1333 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1387
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1388 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1445
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1446 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1503
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1504 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1539
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1456 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1512
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1513 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1546
>gi|348525294|ref|XP_003450157.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
Length = 2209
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 149/599 (24%), Positives = 254/599 (42%), Gaps = 42/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 427 DGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYT 486
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + + P ++ + C + + V ++W
Sbjct: 487 CMASNSRGIDEASADLLVW-ARTRITKPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEK 545
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I D+N +P + +D G L I+ D G Y C V S G S + V
Sbjct: 546 SGTVI---DVNT--SPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 600
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTN---WNSTWFNVSEHVI 233
P P V K + + W P+ Y + N W N+
Sbjct: 601 LPHAPENPIAVLSTTEKRAINLTWAQAFDGNSPLIRYILEVSENNAPWTVLLANIEPEST 660
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V L+P +Y+F++ A N++G G+ S + + P + P P
Sbjct: 661 GVTV------------GGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 708
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ G + I W+P P QN P Y I + + Q +K N +
Sbjct: 709 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQ---MKNITNPDQTSLL 765
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T YE++V A N G G S VT ++ + +P V P V + NST + TW
Sbjct: 766 LEDLIIWTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVQAEAVNSTTVRFTWT 825
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKV 469
+ I G G+++ W+ P E AV + + + + I GL+ T+YY V
Sbjct: 826 APS--PQFINGINQGYKLLAWEPSRPNEVAVVMVRPNFQDSVHIGYIAGLKRFTEYYTSV 883
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ + G+GP S RT+ P + I T++ V+W+ P + + GY
Sbjct: 884 LCFTTPGDGPRSPPQRLRTHEDTPGA-VGHLSFTDILDTSLKVSWK--EPQEKNGILTGY 940
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
++ E ++ +R + + T + + L+P Y ++V A ++ G G++S+ I+
Sbjct: 941 RISWEEFNRTNTRVTHYLPNL--TQEYKVTGLTPLTTYTIQVAAMTSKGQGQLSASTIS 997
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 154/347 (44%), Gaps = 36/347 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
EV + W G+ P+ +Y + R +S W V + E + Y I
Sbjct: 1424 EVQARRVLLSWEPGSDGLSPVRYYTVQYRELPDSNW-TVHSASVSHETNSY-------IV 1475
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1476 DRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTILSVTPHTTTSVLVRWQ 1535
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 361
P P + N + +++ +R+ + +S T++ + VR SE T+
Sbjct: 1536 PPPEDHINGVLLGFRVRYRELHYDRVRSFTVRTVNSPSTNWADLTAPYSVRNLSESSLTQ 1595
Query: 362 YE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
YE +++ N VG GP S +F E +P PQ V + +T ++VT
Sbjct: 1596 YELDNLSKHKRYEIRLSVYNAVGEGPSSAPQEVFVGEAVPTAPPQNVVVQSSTATQLDVT 1655
Query: 411 WNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
W+P L +N G + G++I +W+ ++ E +L + G T Y +
Sbjct: 1656 WDPPPLDAQN--GDIQGYKIYFWEFQLQNETERLRTLFLPELGVKLKNLTGY---TTYMI 1710
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
V A+N AG+GP S RT + AP PS VH + T+V+V+W
Sbjct: 1711 SVAAFNAAGDGPRSLPTRGRTQQAAPSA-PSYVHFSELTTTSVNVSW 1756
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 188/435 (43%), Gaps = 47/435 (10%)
Query: 166 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
G++S T I G PP LPG + + + S T+Q+ G I+ +++ A+
Sbjct: 989 GQLSAST--ISSGVPPELPGPPTNLAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQIGI 1046
Query: 222 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENV-LVPWSTYEFKVIAGNELGYGEPSSPS 277
N W V + + E D S+E + L P++ Y F++ N +G PS PS
Sbjct: 1047 IGENEEWLMVQQ--LANEPD------ARSLEVLDLNPYTYYRFRMRQVNIVGTSPPSQPS 1098
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNIY-YKIFWRKKNDTEF 335
+ T P AP+ + L + W PLP + N P++ Y+I + K
Sbjct: 1099 RKIQTLQAPPDIAPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRIQYAKAGTK-- 1156
Query: 336 QSETLKEYGNVGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAE 387
G V V+ R+ EF +TEYEV+VQAIN +G GP S+ V + E
Sbjct: 1157 --------GGVLSHVIMDRLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPVHCRTRE 1208
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P P V + S++I V W ++ N G ++G+++ Y ++D+ + +
Sbjct: 1209 SVPSSGPTNVSAFATTSSSILVRWGEVQETDRN--GLILGYKVVYKEKDSDTAPDFWTVE 1266
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
T + + GL Y ++V+A+ G+G S LERT P PP + +
Sbjct: 1267 GNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRCSSPSILERTLDDVP-GPPVGILFPEVR 1325
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN-DTIIPVGNTLDADIVDLSPGK 565
T+V + W+ P+ I+ Y++ + + A D + P A L P
Sbjct: 1326 TTSVRLIWQ--PPAQPNGIILAYQITFRRNSSNSNAATVDVLSPSARQYTA--AGLKPEM 1381
Query: 566 RYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1382 VYVFRLTAQTRKGWG 1396
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 172/425 (40%), Gaps = 38/425 (8%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I +W FN + +
Sbjct: 904 EDTPGAVGHLSFTDILDTSLKVSWKEPQEKNGILTGYRI----SWEE--FNRTNTRVTHY 957
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP----YQAPS 292
+ T + + L P +TY +V A G G+ S+ + P + P A S
Sbjct: 958 LPNLTQEYKVT---GLTPLTTYTIQVAAMTSKGQGQLSASTISSGVPPELPGPPTNLAIS 1014
Query: 293 RIGGGG-------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
IG G G SIS W+ + N + + + N+ + +S + +
Sbjct: 1015 NIGPRSVTLQFKPGYDGKTSISRWQVEAQIGIIGENEEWLMVQQLANEPDARSLEVLDLN 1074
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFN 403
YT Y +++ +N VG P S+ I + + P +AP V R +
Sbjct: 1075 P-------------YTYYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTAS 1121
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
T++ + W P+ N L+G+RI+Y K + + I L+ T
Sbjct: 1122 ETSLWLRWVPLPEWEYNGNPDLVGYRIQYAKAGTKGGVLSHVIMDRLEREFTIEDLEEWT 1181
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
+Y V+V A N G GP S+ RT P P+ V +++ V W V +
Sbjct: 1182 EYEVRVQAINGIGSGPWSQPVHCRTRESVPSSGPTNVSAFATTSSSILVRWGEVQETDRN 1241
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRM 582
I+GYKV E D D A D GNT + + L Y ++VLAF+ GDGR
Sbjct: 1242 GLILGYKVVYKEKDSDT--APDFWTVEGNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRC 1299
Query: 583 SSPAI 587
SSP+I
Sbjct: 1300 SSPSI 1304
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P+ VW KD I R ++ G+L I+ + DD+G++ C A N+
Sbjct: 338 VDIPCQARGTPQPEIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNL 397
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P + ++ L C T A W G R+
Sbjct: 398 AGEIQTNTYLAVTSIAPNITAGPSDSAVIDGMSVILHC--ETSGAPRPAITW-QKGERV- 453
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVG 166
+ ++ P ++ G L I+ + +DAG Y C+ ++ G
Sbjct: 454 -LASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRG 494
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 12 CNPEAAP--KPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
C A P K W+KDG ++ +G GRR L+IS + DSG Y C A+
Sbjct: 249 CVANARPLVKMSITWRKDGAVVNTGIRDFGRR-------LVISLPAVSDSGYYECEASLR 301
Query: 66 HGMDES---KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S L VL P + ++ P I+ + + + C A ++ +W + V
Sbjct: 302 SSSVPSVTAGAYLHVLEYPLFVKEPPSHISAEMEKVVDIPCQARGTPQPEI--VWYKDAV 359
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
I + + + GG L+I D G ++C ++ G+I T T + V
Sbjct: 360 PISPVKIPRYRV----LVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYLAV 409
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 130/333 (39%), Gaps = 28/333 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G S+P + A P P + L ++W+P P + QN
Sbjct: 1607 YEIRLSVYNAVGEGPSSAPQEVFVGEA-VPTAPPQNVVVQSSTATQLDVTWDPPPLDAQN 1665
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1666 GDIQGYKIYFWEFQLQNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1719
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP V +T++NV+W E + N G + G+R+ Y
Sbjct: 1720 DGPRSLPTRGRTQQAAPS-APSYVHFSELTTTSVNVSWG--EPKQAN--GIIEGYRLVYE 1774
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W I L Y ++ A GPE E +
Sbjct: 1775 PCTPVDGVSKIVTVDVKGSAPQWMKIKDLADGVTYNFRIRA-KTLTYGPEVEANITTGPG 1833
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I +T + S PI Y + D+ + IP
Sbjct: 1834 EGAPGPPGEPFISRYG---TALTLHWTSGDQGRAPITRYVIEARPSDEGLWDILIKDIPR 1890
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
TL+ D+ L G Y RV+A ++ G G
Sbjct: 1891 EVTSYTLNMDM--LREGVTYDFRVIAVNDYGYG 1921
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + T+ T+ WT G PIT Y I AR + W ++ I +EV YT +
Sbjct: 1845 ISRYGTALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPREVTSYTLNMDMLR 1903
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPS 274
E V TY+F+VIA N+ GYG PS
Sbjct: 1904 EGV-----TYDFRVIAVNDYGYGSPS 1924
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I S R I + L+I D+G Y A N + + I
Sbjct: 153 PRPQITWFRDGRKIPSSSRIAIALDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPIT 212
Query: 78 LH-----GPS-----YYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ P ++ RN + C A+ L+ ++ W +G + N
Sbjct: 213 LTVENVGGPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRKDGAVV-N 271
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
+ + G L I+ + +D+G YEC
Sbjct: 272 TGIRDF--------GRRLVISLPAVSDSGYYEC 296
>gi|432865237|ref|XP_004070484.1| PREDICTED: neural cell adhesion molecule L1-like [Oryzias latipes]
Length = 1276
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 248/568 (43%), Gaps = 64/568 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG + C +PKPK W+++G+++ + R + +G L I+ V+ DD G+Y+C
Sbjct: 457 EGQRALLQCETFGSPKPKVTWEREGSLLLAEPRVNLLTSGALEIANVTLDDKGLYNCNVQ 516
Query: 64 N----VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
N + E R ++L P + P + C A L+D +
Sbjct: 517 NSNLSITAELEVFNRTVILSMPQDLKAQPGTSAV-------FTCKA----LVDPHFRDPQ 565
Query: 120 NGVRIGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
R N L E + D L I + + D G Y C V +++ T+ +
Sbjct: 566 IQWRKDNQKLQESISDEKYTFDESDLIIADVNADDEGVYTCEVITSLDMAKADGTLTLID 625
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P P + + + T++WT G + P+ Y I N+ E K
Sbjct: 626 RPDPPSRLLLADPDSRVVTLRWTPGDDHNSPVKDYVIEFEDQ------NLKERGWQKLKK 679
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
+ + A + L P+ +Y+F++ A NE+G PS PS YNT A+ P + P +
Sbjct: 680 VKSNKDHAVLS--LRPYMSYKFRISAINEVGNSGPSQPSDIYNTSAEAPDKNPENVRSES 737
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRK---------KNDTEFQSETLKEYGNVGIA 349
L I+W+ + + + N P+ +YK+ WR+ +N T+ L ++G+VG
Sbjct: 738 VHPNTLVIAWKEMEKHEFNGPDFHYKVMWRRAVGSGPIWHENITKV---PLVDFGDVG-- 792
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +EVKVQA N+ G GPE + V ++S ED+P P V NST +
Sbjct: 793 --------SFAAFEVKVQAANEKGDGPEPDPVIVYSGEDVPLEGPLVVGIDLKNSTTVEA 844
Query: 410 TWNPIELIRENIRGRLIGHRIKY-WK--------EDNPEETAVYYLSRTTRNWALIVGLQ 460
W PI+ +E +RG L+G++I WK E + + +I L+
Sbjct: 845 RWAPID--KEKVRGHLLGYKIHLTWKGYRFHHGHGSTDSENTIVEKTEPNEERKVISNLR 902
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P +KY + V +NN GEGP SE T P PP+ + ++ +P+ +T + P
Sbjct: 903 PFSKYDLAVTVFNNKGEGPYSETVPFMTEEGVP-GPPAFLSLR--SPSETEMTMEWKPPV 959
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTII 548
+ GY ++ Q ++ +D++I
Sbjct: 960 HPNGNLTGYVLQY----QQITENDDSLI 983
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 142/616 (23%), Positives = 236/616 (38%), Gaps = 101/616 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C + P P W +G + +R E+G+L++ V +D+ +Y C A+N
Sbjct: 366 GETVRLDCQADGTPSPTIRWTVNGARLPENSKRIRVESGSLILEHVVFEDTAVYQCLASN 425
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKIT---------IAAHRNLQLRCSAHTEELLDVAY 115
HG I + Y LPP+I I R L L+C V
Sbjct: 426 KHGT-------IFTNTHVYVINLPPQILTKDGEIYSHIEGQRAL-LQCETFGSPKPKVT- 476
Query: 116 IWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT-- 172
W G + L P +N+ G LEI N + D G Y C V+++ I+ +
Sbjct: 477 -WEREGSLL-------LAEPRVNLLTSGALEIANVTLDDKGLYNCNVQNSNLSITAELEV 528
Query: 173 ---TVIVEGPPGL---PGGVQV------VEVHKTSATIQW-TDGATNGRPITHYKIIART 219
TVI+ P L PG V V+ H IQW D I+ K
Sbjct: 529 FNRTVILSMPQDLKAQPGTSAVFTCKALVDPHFRDPQIQWRKDNQKLQESISDEKYT--- 585
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
F+ S+ +I A E V Y +VI ++ + +
Sbjct: 586 ------FDESDLIIAD--------VNADDEGV------YTCEVITSLDMAKADGTL---- 621
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
T D+P PSR+ +++ W P + N+P Y I EF+ +
Sbjct: 622 --TLIDRP-DPPSRLLLADPDSRVVTLRW--TPGDDHNSPVKDYVI--------EFEDQN 668
Query: 340 LKEYGNVGIAVVR------IPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQV 392
LKE G + V+ + S Y Y+ ++ AIN+VG S+ I+ ++ + P
Sbjct: 669 LKERGWQKLKKVKSNKDHAVLSLRPYMSYKFRISAINEVGNSGPSQPSDIYNTSAEAPDK 728
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P+ V S + + + W +E + G +++ + + +++ + T
Sbjct: 729 NPENVRSESVHPNTLVIAWKEME--KHEFNGPDFHYKVMWRRAVG--SGPIWHENITKVP 784
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ + VKV A N G+GPE + + + P + P V I N TTV
Sbjct: 785 LVDFGDVGSFAAFEVKVQAANEKGDGPEPDPVIVYSGEDVPLEGPLVVGIDLKNSTTVEA 844
Query: 513 TWRYVSPSFEEEPIIGYKVRV------WEVDQDMSRANDTIIPVG--NTLDADIVDLSPG 564
W + ++GYK+ + + + + +TI+ N I +L P
Sbjct: 845 RWAPIDKEKVRGHLLGYKIHLTWKGYRFHHGHGSTDSENTIVEKTEPNEERKVISNLRPF 904
Query: 565 KRYHMRVLAFSNGGDG 580
+Y + V F+N G+G
Sbjct: 905 SKYDLAVTVFNNKGEG 920
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 12/183 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G + + C + P P+ W +KDG + S ++ F N L VS D G Y C
Sbjct: 273 ALRGQTLDLECIAQGLPTPRVTWLRKDGELSESRTVKESF-NHRLRFLNVSESDGGEYQC 331
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + L V P Y+ + P AA ++L C A + WT N
Sbjct: 332 IADNTQGKAKHTFMLTVEAAP-YWIKEPVSQLYAAGETVRLDCQADGTPSPTIR--WTVN 388
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
G R+ + I ++ G L + + F D Y+C+ + G I T T V ++ P
Sbjct: 389 GARLPE------NSKRIRVESGSLILEHVVFEDTAVYQCLASNKHGTIFTNTHVYVINLP 442
Query: 180 PGL 182
P +
Sbjct: 443 PQI 445
>gi|119609535|gb|EAW89129.1| sidekick homolog 2 (chicken), isoform CRA_d [Homo sapiens]
Length = 1790
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 284 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 343
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 344 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 402
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 403 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 457
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 458 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 511
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 512 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 568
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 569 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 628
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 629 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 683
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 684 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 741
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 742 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 798
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 799 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 854
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1271 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1329
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1330 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1377
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1378 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1437
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1438 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1497
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1498 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1555
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1556 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1611
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1612 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1668
Query: 570 RVLA 573
R+ A
Sbjct: 1669 RIRA 1672
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 816 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 872
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 873 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 926
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 927 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 985
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 986 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1037
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1038 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1095
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1096 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1155
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1156 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1205
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 925 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 984
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 985 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 1043
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1044 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1103
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1104 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1161
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 961 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1018
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1019 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1070
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1071 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1129
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1130 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1187
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1188 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1243
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1244 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1301
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ + V + + IVD L P Y RV A ++ GD
Sbjct: 1302 RYYTIQTRELPSGRWALHSA--SVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1353
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 195 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 254
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 255 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 311
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 312 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 361
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K +WKKDG ++ SGG N L I + D+G Y C A
Sbjct: 102 VTLECVANARPLIKLHIIWKKDGVLL-SGGISD--HNRRLTIPNPTGSDAGYYECEAVLR 158
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S R L VL P + ++ IT + + + C A + + + W +
Sbjct: 159 SSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCQA--KGVPPPSITWYKDAA 216
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ L N DGG L+I+ D G ++C ++ G++ T T + V
Sbjct: 217 VVEVEKLTRFRQRN---DGG-LQISGLVPDDTGMFQCFARNAAGEVQTSTYLAV 266
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 35/252 (13%)
Query: 33 SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-----GPSYYEQL 87
+G R+ I L+I D+G Y A N D + I L GP+
Sbjct: 25 AGCRQAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLTVENVGGPADPIAP 84
Query: 88 PPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141
I +A + L C A+ L+ + IW +GV L + I+
Sbjct: 85 TIIIPPKNTSVVAGTSEVTLECVANARPLIKLHIIWKKDGV---------LLSGGISDHN 135
Query: 142 GLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 198
L I N + +DAG YEC + S+V + + V PP V+ E H T+
Sbjct: 136 RRLTIPNPTGSDAGYYECEAVLRSSSVPSVVRGAYLSVLEPPQF---VKEPERHITAEME 192
Query: 199 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWST 257
+ D + + I TW+ + V +++ R+ R + ++ + LVP T
Sbjct: 193 KVVDIPCQAKGVPPPSI--------TWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDT 244
Query: 258 YEFKVIAGNELG 269
F+ A N G
Sbjct: 245 GMFQCFARNAAG 256
>gi|157819517|ref|NP_001101773.1| protein sidekick-2 [Rattus norvegicus]
gi|149054713|gb|EDM06530.1| sidekick homolog 2 (chicken) (predicted) [Rattus norvegicus]
Length = 2053
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 266/601 (44%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 319 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 378
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 379 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 437
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 438 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 491
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + + + + + W P+ Y I+ + N+ W ++
Sbjct: 492 QLPHAPEHPVATLSTMERRAINLTWAKPFDGNSPLMRY-ILEMSENNAPW-----TILLA 545
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 546 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 600
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 601 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 660
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NSTAI T
Sbjct: 661 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTAIRFT 715
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 716 WNAPS--PQFINGINQGYKLIAWEPTQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 773
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 774 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 830
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 831 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 888
Query: 588 T 588
+
Sbjct: 889 S 889
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 181/425 (42%), Gaps = 39/425 (9%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1306 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1364
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1365 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1412
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1413 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1472
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ YE+++ N VG GP S +F E +P APQ V +T ++VTW P
Sbjct: 1473 YLTKHRRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPP 1532
Query: 415 ELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L +N G + G++I +W + + E +L+ + + G T Y V V A
Sbjct: 1533 PLDNQN--GDIQGYKIYFWEVQRRNLTERVKTLFLAENSVKLKNLTGY---TAYMVSVAA 1587
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N AG+GP S +T + AP P S V + T+V+V+W +P F P+ GY++
Sbjct: 1588 FNAAGDGPRSTPTQGQTQQAAPSAPGS-VKFSELTTTSVNVSWD--APQFPNGPLEGYRL 1644
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
V+E PV VD+ ++V + G R A TF
Sbjct: 1645 -VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKAKTFTY 1693
Query: 592 GEEKE 596
G E E
Sbjct: 1694 GPEIE 1698
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 194/455 (42%), Gaps = 60/455 (13%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 851 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGAPTNLG 904
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + + + E D +
Sbjct: 905 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGMIGEGEEWLLI--YQLSNEPDA----R 958
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 959 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1017
Query: 305 SISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 358
+ W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1018 WLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHTVQD---------RVEREYTIED 1068
Query: 359 ---YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 1069 LEEWTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIP 1128
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 1129 EADRN--GLVLGYKVRYKEKDSDSQARFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRI 1186
Query: 476 GEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1187 GDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPATPNGIILAYQI--- 1240
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1241 -----THRLNAT---TANTATVEV--LAPSARQYM 1265
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 180/426 (42%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 796 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 854
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 855 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 904
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W + + + ++ N+ + +S
Sbjct: 905 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGMIGEGEEWLLIYQLSNEPDARS----- 959
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRG 401
+ +P +T Y +++ +N VG P S+ I + + P +AP V R
Sbjct: 960 --------MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRT 1011
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ + N +G++IKY + D +T + + I L+
Sbjct: 1012 ASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHTVQDRVEREYTIEDLEE 1071
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S+ + RT P P+ V +++ V W + +
Sbjct: 1072 WTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1131
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GYKVR E D D S+A ++ ++ A + L Y ++VLAF+ GDG
Sbjct: 1132 RNGLVLGYKVRYKEKDSD-SQARFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1190
Query: 582 MSSPAI 587
S P I
Sbjct: 1191 PSHPPI 1196
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 176/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 996 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1053
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1054 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1105
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q+ GN +
Sbjct: 1106 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQARFWLVEGNSSRS 1164
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1165 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1222
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1223 LIWQPPATPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1278
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1279 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1336
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1337 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1388
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1480 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1538
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1539 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1593
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W+ + G L G+R+ Y
Sbjct: 1594 GPRSTPTQGQTQQAAPS-APGSVKFSELTTTSVNVSWDAPQFPN----GPLEGYRLVYEP 1648
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1649 CTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1706
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1707 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1764
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1765 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1800
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ G R K +G L IS + DD+G+ C A N
Sbjct: 230 VDIPCRAKGVPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMVQCFAHNA 289
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 290 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 345
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 346 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 396
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1717 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1773
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1774 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1807
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 35/273 (12%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 45 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 104
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I +A + + C A+ L+ + +W +G + N
Sbjct: 105 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALLSN 164
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 183
I+ L ITN +DAG YEC + S+V ++ + V PP
Sbjct: 165 ---------GISDYNRRLTITNPMVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQF- 214
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+ E H T+ + D + + I TW+ + V ++ R+ R
Sbjct: 215 --VREPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFKQR 264
Query: 244 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
+ ++ + L+P T + A N G + S+
Sbjct: 265 SDGGLQISGLLPDDTGMVQCFAHNAAGEAQTST 297
>gi|7959295|dbj|BAA96038.1| KIAA1514 protein [Homo sapiens]
Length = 1598
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 92 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 151
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 152 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 210
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 211 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 265
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 266 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 319
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 320 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 376
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 377 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 436
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 437 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 491
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 492 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 549
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 550 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 606
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 607 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 662
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1079 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1137
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1138 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1185
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1186 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1245
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1246 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1305
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1306 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1363
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1364 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1419
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1420 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1476
Query: 570 RVLA 573
R+ A
Sbjct: 1477 RIRA 1480
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 624 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 680
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 681 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 734
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 735 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 793
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 794 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 845
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 846 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 903
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 904 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 963
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 964 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1013
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 733 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 792
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 793 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 851
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 852 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 911
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 912 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 969
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 769 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 826
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 827 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 878
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 879 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 937
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 938 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 995
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 996 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1051
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1052 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1109
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1110 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1161
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 3 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 62
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 63 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 118
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 119 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 169
>gi|345804803|ref|XP_540402.3| PREDICTED: protein sidekick-2 [Canis lupus familiaris]
Length = 2180
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 264/600 (44%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 423 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 482
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 483 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 541
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 542 DGTALG-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 596
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 597 LPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLLRYLLEMSEN-NAPW-----TVLLAS 650
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 651 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 705
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 706 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 765
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 766 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 820
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 821 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 878
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 879 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 935
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 936 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 993
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 183/425 (43%), Gaps = 53/425 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y + R W +VS +
Sbjct: 1410 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASA 1468
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1469 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1516
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1517 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1576
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1577 SMYAVRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1636
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V G +T ++VTW P L EN G + G++I +W + + E +L+ +
Sbjct: 1637 NVAVHGATATQLDVTWEPPPL--ENQNGDIQGYKIYFWEAQRRNVTERVKTLFLAENSVK 1694
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1695 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSA-PSSVRFSELTTTSVNV 1750
Query: 513 TWRYVSPSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
+W +P F + GY++ V+E VD +S+ + + L + DL+ G Y
Sbjct: 1751 SWE--APQFPNGVLEGYRL-VYEPCTPVD-GVSKIVTVDVKGSSPLWLKVKDLAEGMTYR 1806
Query: 569 MRVLA 573
R+ A
Sbjct: 1807 FRIRA 1811
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 194/465 (41%), Gaps = 46/465 (9%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 955 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1008
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W V H + E D R
Sbjct: 1009 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1063
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
E L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1064 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1121
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1122 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1173
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V WN I
Sbjct: 1174 EEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPE 1233
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
N G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 1234 ADRN--GLVLGYKVMYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 1291
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
+G P LERT P PP + + T+V + W+ P+ I+ Y+V
Sbjct: 1292 DGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQV-THR 1347
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ + A + + L P Y R+ A + G G
Sbjct: 1348 LNASTANAATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWG 1392
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 900 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 958
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 959 LEYRVTG---------LTALTTYTIEVAAMTAKGQGQVSASTISSGVPPELP-GAPTNLG 1008
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + +P
Sbjct: 1009 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPE 1068
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1069 LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPL 1128
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D +T + + I L+ T+Y V+V A+N
Sbjct: 1129 PEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1188
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W + + ++GYKV
Sbjct: 1189 IGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYK 1248
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1249 EKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1300
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 180/433 (41%), Gaps = 34/433 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1100 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1157
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1158 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1209
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1210 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1268
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1269 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1326
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I + HR+ V L+ + R + GL+P++ Y +
Sbjct: 1327 LIWQPPAAPNGIILAYQVTHRLN---ASTANAATVEVLAPSARQYT-ATGLKPESVYLFR 1382
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1383 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1440
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRM--- 582
Y V+ E+ R V + A +VD L P Y RV A ++ GD
Sbjct: 1441 RYYTVQTRELPG--GRWALHSASVSHNASAFVVDRLKPFTSYKFRVKATNDIGDSEFSEE 1498
Query: 583 SSPAITFQMGEEK 595
S P T Q ++
Sbjct: 1499 SEPLTTLQAAPDE 1511
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 136/338 (40%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1603 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLENQN 1661
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1662 GDIQGYKIYFWEAQRRNVTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1716
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1717 GPRSTPTRGQTQQAAPS-APSSVRFSELTTTSVNVSWEAPQFPN----GVLEGYRLVYEP 1771
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + ++ W + L Y ++ A GPE E + T
Sbjct: 1772 CTPVDGVSKIVTVDVKGSSPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANVT-TGPG 1829
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1830 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1887
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1888 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1923
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1840 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1896
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1897 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1930
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ + + G+ L IS + DD+G++ C A N
Sbjct: 334 VDIPCRAKGVPPPSITWYKDAAVVEVERLNRFRQRGDGGLQISGLVPDDTGMFQCFARNA 393
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 394 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 449
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 450 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 500
>gi|348510471|ref|XP_003442769.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Oreochromis niloticus]
Length = 1348
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 159/604 (26%), Positives = 263/604 (43%), Gaps = 53/604 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E VT+ C ++P W KD + G R + ENG+L I V R D+G Y+C A
Sbjct: 446 ERKGVTMHCKVFSSPPSTITWSKDDSPESVHGPRFTVHENGSLKIYNVERGDTGQYTCLA 505
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHN 120
N G L V P+ P I QL C A ++ D +W +
Sbjct: 506 KNTEGSSAINAMLYV-KDPTRIVVAPEDQRILIGTTAQLSCLAEYDKSFSNDFELLWEKD 564
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS------------TVGKI 168
+ I LN ++ G+ I N S +D G Y CV K+ +G++
Sbjct: 565 DMEIA---LNYTVNSRYFVENGVFHIMNVSHSDQGVYRCVAKTPADQDVASALLMVLGEL 621
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI-IARTNWN-STWF 226
+ + P P + + + + T++W G + T + I ++W S W
Sbjct: 622 TCERCFCFGDVPDAPENLVLSDRKGRNVTLKWVPGDDHNSSTTEFIIEYEESHWEPSNW- 680
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
KE+ R G + S E L Y F+V A N +G G PS + +Y TP +
Sbjct: 681 --------KELLRVPGNRN-SAELRLNGNVDYCFRVSAVNAVGTGRPSEATERYKTPPEA 731
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 345
P + P I G ++ I WEPL + N P++ YK+ +R+++ + +++ T+K +
Sbjct: 732 PDRNPENIRIEGHLPHEMDIKWEPLLPIEHNGPSLEYKVSYRRQDVEEDWKEHTVKRHSF 791
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
V V P+ + YE+K+QA N G GPE ++VT +S ED P AP V + NS+
Sbjct: 792 V---VRNTPT---FVPYEIKIQAKNRQGFGPEPKLVTGYSGEDFPSAAPDNVAVKVMNSS 845
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT------RNWALIVGL 459
+ V+W + ++ + G L G+RI +W+ + ++ + T +N A + L
Sbjct: 846 VVKVSWTRVH--KDKLHGHLGGYRISWWRLRSLVDSKKSPGDKHTLTVPGDKNHATVPSL 903
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P ++Y + VM +N G GP S +T P+K + + TV + W+ P
Sbjct: 904 TPFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEK-NHDFRVTDVQRHTVSLAWK---P 959
Query: 520 SFEEEPI-IGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
E I IGY ++ ++ +++ I T + DL P +Y + + +
Sbjct: 960 PLEPNGILIGYLLKYQLINDTEEVGPLQTVDISKPETTTWILRDLEPLSKYKFYLCSCTA 1019
Query: 577 GGDG 580
G G
Sbjct: 1020 VGCG 1023
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 20/312 (6%)
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGI 348
AP + K ++++ W +P + N+ + I + + + + E L+ GN
Sbjct: 635 APENLVLSDRKGRNVTLKW--VPGDDHNSSTTEFIIEYEESHWEPSNWKELLRVPGNRNS 692
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAI 407
A +R+ +Y +V A+N VG G SE + + + P P+ + G +
Sbjct: 693 AELRLNGN---VDYCFRVSAVNAVGTGRPSEATERYKTPPEAPDRNPENIRIEGHLPHEM 749
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYY 466
++ W P+ I N G + +++ Y ++D E+ + T + + +V P Y
Sbjct: 750 DIKWEPLLPIEHN--GPSLEYKVSYRRQDVEED----WKEHTVKRHSFVVRNTPTFVPYE 803
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+K+ A N G GPE + + P P V +K +N + V V+W V +
Sbjct: 804 IKIQAKNRQGFGPEPKLVTGYSGEDFPSAAPDNVAVKVMNSSVVKVSWTRVHKDKLHGHL 863
Query: 527 IGYKVRVWE----VDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
GY++ W VD S + + V G+ A + L+P Y + V+ F+ G+G
Sbjct: 864 GGYRISWWRLRSLVDSKKSPGDKHTLTVPGDKNHATVPSLTPFSEYSLIVMTFNGRGNGP 923
Query: 582 MSSPAITFQMGE 593
S P + F+ E
Sbjct: 924 GSHP-VNFKTPE 934
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISP-VSRDDSGIYSCT 61
+G ++ + C E P P+ WKK G+ S R FEN G L+I P ++DSG Y C
Sbjct: 264 KGEDLNLECIAEGFPTPQVEWKKMGHKFPSKVR---FENHGKLVIVPRAEQEDSGNYMCK 320
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + + V P + + ++++ ++ ++CSA + W
Sbjct: 321 AKNPLGEVQHTFTVTVEEPPEWVFEPESQLSMIG-SDVHIKCSASG--IPQPTTTW---- 373
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R+ L E N + G + I NA +D+ Y+C + G I + +++
Sbjct: 374 -RVNGGPLQESPARNRRVIGDTIVIHNAQVSDSAVYQCEASNRHGTILSNANIMI 427
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +V I C+ P+P W+ +G + S R + ++I DS +Y C A+
Sbjct: 354 GSDVHIKCSASGIPQPTTTWRVNGGPLQESPARNRRVIGDTIVIHNAQVSDSAVYQCEAS 413
Query: 64 NVHGMDESKGRLIVLH-GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N HG S +++++ P + ++ + + + C + + W+ +
Sbjct: 414 NRHGTILSNANIMIMNLQPMILTSEGEEYSVVERKGVTMHCKVFSSPPSTIT--WSKDD- 470
Query: 123 RIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ P + + G L+I N D G+Y C+ K+T G + + V+ P
Sbjct: 471 -----SPESVHGPRFTVHENGSLKIYNVERGDTGQYTCLAKNTEGSSAINAMLYVKDP 523
>gi|351701670|gb|EHB04589.1| Protein sidekick-2, partial [Heterocephalus glaber]
Length = 2137
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 155/600 (25%), Positives = 262/600 (43%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 397 DGTSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGSYT 456
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + Y+W
Sbjct: 457 CLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMVCGVAHDPRVTIRYVWEK 515
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G + M+ N P I +D G L IT D G Y C V S G S + V
Sbjct: 516 DGATL-TMESN----PRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 570
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W + V
Sbjct: 571 LPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPWTTLLASV---- 625
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 626 ------DPEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 679
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 680 IASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 739
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NSTAI TW
Sbjct: 740 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTAIRFTW 794
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 795 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 852
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 853 VLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFSDILDTSLKVSWQ--EPGEKNGILTG 909
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 910 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 967
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 179/441 (40%), Gaps = 52/441 (11%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1384 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNASS 1442
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1443 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEDSESLTTLQAAPDEAPTVL 1490
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL++ N G +
Sbjct: 1491 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRDINNPGAKWAELT 1550
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1551 SLYSMRNLSRPSLTQYELENLNKHRRYEIRMSVYNAVGEGPLSSPQEVFVGEAVPTAAPR 1610
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G +T ++VTW P L +N G + G++I +W+ T N
Sbjct: 1611 NVAVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRKNLTERVKTLFLAENGVK 1668
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L T Y V V A+N AG+GP S +T + AP PS+V + T+V+V+W
Sbjct: 1669 LKNLTGYTAYMVSVAAFNAAGDGPRSTPVRGQTQQAAPSA-PSSVKFSELTTTSVNVSWE 1727
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P F + GY++ V+E PV VD+ ++V +
Sbjct: 1728 --DPQFPNGILEGYRL-VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVKDLA 1774
Query: 576 NGGDGRMSSPAITFQMGEEKE 596
G R A TF G E E
Sbjct: 1775 EGMTYRFRIKAKTFTYGPEIE 1795
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 193/466 (41%), Gaps = 48/466 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 929 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 982
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 983 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLL--HQLSNEPDA----R 1036
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1037 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1095
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1096 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVPDRVEREYTIEDL 1147
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S V + E +P P V + S+++ V WN I
Sbjct: 1148 EEWTEYRVQVQAFNAIGSGPWSPAVLGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPE 1207
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
N G ++G++++Y ++D+ + + + A I GL Y V+V+A+ G
Sbjct: 1208 ADRN--GLILGYKVRYKEKDSDSQPRFWLVEGNASRSAQITGLGKYVLYEVQVLAFTRIG 1265
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-RVW 534
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1266 AASPSQPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPASPNGIILAYQITHRL 1322
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ A + + P A L P Y R+ A + G G
Sbjct: 1323 NATTANTAAVEVLAPSARQFTAS--GLKPESVYLFRITAQTRKGWG 1366
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 173/419 (41%), Gaps = 26/419 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 874 EDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 932
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 933 LEYRVTG---------LTALTTYTIEVAAMTAKGQGQVSASTISSGVPPELP-GAPTNLG 982
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE-----TLKEYGNVGIA- 349
+++ + P K + W + E L + N A
Sbjct: 983 ISNIGPRSVTLQFRPGYDGKTSISR------WLVEAQVGVVGEGEEWLLLHQLSNEPDAR 1036
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++
Sbjct: 1037 SMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLW 1096
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G++IKY + D +T + + I L+ T+Y V+
Sbjct: 1097 LRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVPDRVEREYTIEDLEEWTEYRVQ 1156
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S L RT P P+ V +++ V W + + I+G
Sbjct: 1157 VQAFNAIGSGPWSPAVLGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLILG 1216
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKVR E D D S+ ++ + A I L Y ++VLAF+ G S P I
Sbjct: 1217 YKVRYKEKDSD-SQPRFWLVEGNASRSAQITGLGKYVLYEVQVLAFTRIGAASPSQPPI 1274
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 177/418 (42%), Gaps = 31/418 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1074 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1131
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P SP+ T P
Sbjct: 1132 -HVVPDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSPAVLGRTRESVPSS 1183
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1184 GPTNVSALATTSSSMLVRWNEIPEADRNGLILGYKVRYKEK-DSDSQPRFWLVEGNASRS 1242
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+I Y YEV+V A +G P + + +D+P P G+ +T++
Sbjct: 1243 A-QITGLGKYVLYEVQVLAFTRIGAASPSQPPILERTLDDVPG-PPMGILFPEVRTTSVR 1300
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + AV L+ + R + GL+P++ Y +
Sbjct: 1301 LIWQPPASPNGIILAYQITHRLNATTANT---AAVEVLAPSARQFT-ASGLKPESVYLFR 1356
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1357 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1414
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMS 583
Y ++ E+ R V + + VD L P Y RV A ++ GD S
Sbjct: 1415 RYYTIQTRELPG--GRWALHSASVSHNASSFTVDRLKPFTSYKFRVKATNDIGDSEFS 1470
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 136/339 (40%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G SSP + A P AP + G L ++WEP P + QN
Sbjct: 1577 YEIRMSVYNAVGEGPLSSPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1635
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW ++KN TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1636 GDIQGYKIYFWEAQRKNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1689
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S V + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1690 DGPRSTPVRGQTQQAAPS-APSSVKFSELTTTSVNVSWEDPQFPN----GILEGYRLVYE 1744
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A GPE E + T
Sbjct: 1745 PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANVT-TGP 1802
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1803 GEGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPK 1860
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1861 EVSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1897
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 109 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 168
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ +PPK T +A + + C A+ L
Sbjct: 169 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIVPPKNTSVVAGTSEVTMECVANARPLTK 228
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ IW G ++ G D N L I N + DAG Y+C + S+V
Sbjct: 229 LHIIWKKGGAQVSSGLSDYNR-----------RLTIPNPTVGDAGYYQCEAVLRSSSVAP 277
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ V PP V+ E H T+ + D + + I TW+
Sbjct: 278 AVRGAHLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPAPSI--------TWYK 326
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 327 DAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNSAG 369
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1814 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1870
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1871 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1904
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 308 VDIPCRAKGVPAPSITWYKDAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNS 367
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 368 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGTSVVLAC--ETSGAPRPAITW-QKGERI- 423
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 424 -LASGSVQLPRFTLLESGSLLISPTHISDAGSYTCLATNSRGVDEASADLVV 474
>gi|345807363|ref|XP_003435600.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Canis lupus
familiaris]
Length = 1247
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 259/603 (42%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 433 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 492
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ K+T C A + L
Sbjct: 493 QAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQASFDPSLQH 544
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G +L E ++ I+ G L I + ++D G Y CV + + + +
Sbjct: 545 SITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRA 599
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG +++ + H ++ + W + PI Y I +A W S
Sbjct: 600 ELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS 659
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 660 ---------LGK-----VPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTP 705
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 706 EAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI--- 762
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 763 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILN 820
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+A+ V W P++ + ++G L G+ + YW E + + ++ R A++
Sbjct: 821 SSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLG 878
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y +++ A+N G GP SE T P P A+H++ + T++ + W+
Sbjct: 879 GLRPYSSYRLELRAFNGRGLGPASEMTFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 934
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D +P ++ +LSP RY ++ A +
Sbjct: 935 PPLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 994
Query: 578 GDG 580
G G
Sbjct: 995 GPG 997
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 141/631 (22%), Positives = 241/631 (38%), Gaps = 58/631 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + T LL A+
Sbjct: 400 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 446
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 447 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVAN 506
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G Q + K + + +T A+ + H W N+ E
Sbjct: 507 LQVKDATQITQGPQSA-IEKKGSKVTFTCQASFDPSLQH-----SITWRGDGRNLQEF-- 558
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + + + + +AG EL E + +P P+ S
Sbjct: 559 -GDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS- 616
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E NAP Y I + K + +L K GN ++
Sbjct: 617 -DRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 673
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G ++ + +TW
Sbjct: 674 LSP---YIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITW 730
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 731 KPLRWMDWN------APQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQ 784
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A N+ G+GPE + + + PQ P IK +N + V V W V P+ + + GY
Sbjct: 785 AVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYN 844
Query: 531 VRVW-------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + R + ++ NT A + L P Y + + AF+ G G S
Sbjct: 845 VTYWWEGSQRRHSKRHVHRGH--VVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPAS 902
Query: 584 SPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 903 E--MTFSTPEGVPGHPEALHLECQSDTSLLL 931
>gi|449490686|ref|XP_004174215.1| PREDICTED: LOW QUALITY PROTEIN: neurofascin-like, partial
[Taeniopygia guttata]
Length = 1044
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 243/547 (44%), Gaps = 59/547 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N + GG K ENG+L + ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNTL-DGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKA 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GN 126
E++ RL V P+ + P + +L C + L + W + +
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSR 587
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
M E DG L I + D G+Y CV + + K K + V
Sbjct: 588 MKKEE--------DG--LTIYGVTEKDQGDYTCVASTELDKDLAKAYLTVLAIPANRLRD 637
Query: 177 --EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHV 232
+ P P +++ ++ + S + W G N PIT Y + + W N S
Sbjct: 638 LPKERPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHS--- 694
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 ------RYPGSVNSAVLS-LSPYVNYQFRVIAVNDVGSSVPSLPSERYQTNGARPEINPT 747
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET++ +V V
Sbjct: 748 GVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVRGARHV---VW 804
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
P Y YE+KVQA ND G PE + +S ED P+ AP V R NSTAI +TW
Sbjct: 805 NTP---IYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVRIRVLNSTAIALTW 861
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKY 465
+ L + I+G+L +R +W++ + + R RN + L P + Y
Sbjct: 862 TRVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGTVSRLFPYSNY 919
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++++ N G+GP SE T P P + I+ N +++ W + P
Sbjct: 920 KLEMVVTNGRGDGPRSEMKEFPTPEGVPSS-PRYLRIRQPNLEIINLEWDH--PEHPNGI 976
Query: 526 IIGYKVR 532
I GY +R
Sbjct: 977 ITGYTLR 983
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 138/616 (22%), Positives = 226/616 (36%), Gaps = 92/616 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIYSC 60
G + + C PKP W +G I S E I V RD S +Y C
Sbjct: 369 GKDGRLVCRANGNPKPSIQWLVNGEPIESSPPNPSREVAGDTI--VFRDTQIGSSAVYQC 426
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
A+N HG + + VL +PP+I RN +R + LD +
Sbjct: 427 NASNEHGYLLANAFVSVL-------DVPPRIL--GPRNQLIRVIQNNRTRLDCPFFGSPI 477
Query: 117 ----WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTK 171
W NG N L+ N + G LE+ A D G Y CV + +GK +
Sbjct: 478 PTLRWFKNG------QGNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQ 531
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ V+ P + G + V + T+ P + TW
Sbjct: 532 VRLEVKDPTRIVRGPEDQVVKR--GTMPRLHCRVKHDPTLRLMV--------TW------ 575
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA-- 284
+ + Y G + E+ L + E + +A EL + PA
Sbjct: 576 -LKDDAPLYLGSRMKKEEDGLTIYGVTEKDQGDYTCVASTELDKDLAKAYLTVLAIPANR 634
Query: 285 --DKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS 337
D P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 635 LRDLPKERPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYIVQFEEDRFQPGMW 690
Query: 338 ETLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVA 393
Y G+V AV+ + Y Y+ +V A+NDVG P SE A P++
Sbjct: 691 HNHSRYPGSVNSAVLSLSP---YVNYQFRVIAVNDVGSSVPSLPSERYQTNGAR--PEIN 745
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAVYYLSRTT 450
P GV G + +TW P+ + G ++Y W+ +P + + + T
Sbjct: 746 PTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS---WYNETV 796
Query: 451 RNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
R +V P Y +KV A N+ G PE + Y+ + P+ P+ V I+ +N T
Sbjct: 797 RGARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTDVRIRVLNSTA 856
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM-----SRANDTIIPVGNTLDADIVDLSPG 564
+ +TW V + + Y+ W + S+ + G+ + L P
Sbjct: 857 IALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRNRGTVSRLFPY 916
Query: 565 KRYHMRVLAFSNGGDG 580
Y + ++ + GDG
Sbjct: 917 SNYKLEMVVTNGRGDG 932
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 12/195 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A ++ +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWMNEPENLILAPGKDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
+ N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 ESSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRIL 451
Query: 184 GG----VQVVEVHKT 194
G ++V++ ++T
Sbjct: 452 GPRNQLIRVIQNNRT 466
>gi|74009165|ref|XP_549364.2| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Canis lupus
familiaris]
Length = 1256
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 259/603 (42%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 438 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ K+T C A + L
Sbjct: 498 QAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQASFDPSLQH 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G +L E ++ I+ G L I + ++D G Y CV + + + +
Sbjct: 550 SITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG +++ + H ++ + W + PI Y I +A W S
Sbjct: 605 ELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGK-----VPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 768 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+A+ V W P++ + ++G L G+ + YW E + + ++ R A++
Sbjct: 826 SSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y +++ A+N G GP SE T P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSSYRLELRAFNGRGLGPASEMTFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 939
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D +P ++ +LSP RY ++ A +
Sbjct: 940 PPLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 999
Query: 578 GDG 580
G G
Sbjct: 1000 GPG 1002
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 141/631 (22%), Positives = 241/631 (38%), Gaps = 58/631 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVAN 511
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G Q + K + + +T A+ + H W N+ E
Sbjct: 512 LQVKDATQITQGPQSA-IEKKGSKVTFTCQASFDPSLQH-----SITWRGDGRNLQEF-- 563
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + + + + +AG EL E + +P P+ S
Sbjct: 564 -GDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS- 621
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E NAP Y I + K + +L K GN ++
Sbjct: 622 -DRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 678
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G ++ + +TW
Sbjct: 679 LSP---YIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITW 735
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 736 KPLRWMDWN------APQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQ 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A N+ G+GPE + + + PQ P IK +N + V V W V P+ + + GY
Sbjct: 790 AVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYN 849
Query: 531 VRVW-------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + R + ++ NT A + L P Y + + AF+ G G S
Sbjct: 850 VTYWWEGSQRRHSKRHVHRGH--VVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPAS 907
Query: 584 SPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 908 E--MTFSTPEGVPGHPEALHLECQSDTSLLL 936
>gi|332261219|ref|XP_003279672.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Nomascus
leucogenys]
Length = 2172
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 155/598 (25%), Positives = 264/598 (44%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G ++ N P I +D G L I+ D G Y C V S G S + V+
Sbjct: 534 DGATLG-IESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVKQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVLPGNVHTEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 TS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGYLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTWKGQGQVSASTIS 985
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 182/424 (42%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNTSS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 353
+ I W+P +K N + ++I +R+ + T++ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTIRGINNPGATWAELT 1568
Query: 354 ----------PSEFYY--------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
PS Y YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 PMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VT P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGTTATQLDVTSEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 166/377 (44%), Gaps = 28/377 (7%)
Query: 166 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 977 GQVSAST--ISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGV 1034
Query: 222 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
W + H + E D + + + L P++ Y F++ N +G PS PS
Sbjct: 1035 VGEGEEWLLI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMHQVNIVGTSPPSQPSR 1087
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEF 335
+ T P AP+ + L + W PLP + N ++ YKI + R +
Sbjct: 1088 KIQTLQAPPDMAPANVSLCTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKT 1147
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S +++ G A+ + +TEY ++VQA N P S++V + E +P P
Sbjct: 1148 LSHVVQDRVERGYAIKDLEE---WTEYRIQVQAFNASRSWPWSQMVVGRTRESVPSSGPT 1204
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V + S+++ V W+ E+ + G ++G+++ Y ++D+ + + + A
Sbjct: 1205 NVSALATTSSSMLVRWS--EVPEADRNGLVLGYKVMYKEKDSDAQPXFWLGEGNSSRSAQ 1262
Query: 456 IVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL Y V+V+A+ G+G P LERT P PP + + T+V + W
Sbjct: 1263 LTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIW 1321
Query: 515 RYVSPSFEEEPIIGYKV 531
+ P+ I+ Y++
Sbjct: 1322 Q--PPAAPNGIILAYQI 1336
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y ++ +N VG P S+ I + + P +AP V + T++ +
Sbjct: 1056 MEVPDLNPFTYYSFRMHQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLCTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R +A I L+ T+Y ++
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERGYA-IKDLEEWTEYRIQ 1174
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N + P S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1175 VQAFNASRSWPWSQMVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1234
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ + ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1235 YKVMYKEKDSD-AQPXFWLGEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 168/414 (40%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLCTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R K+ L W+ Y +V A N P S T P
Sbjct: 1150 -HVVQDRVERGYAIKD------LEEWTEYRIQVQAFNA-SRSWPWSQMVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDAQPXFWLGEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRVRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNTSSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++ EP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTSEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W D ++ R + + L IS + DD+G++ C A N
Sbjct: 326 VDIPCQAKGVPPPSITWYNDAAVVEVEKLARFRHRSDEGLQISGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 441
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 442 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|242019922|ref|XP_002430407.1| Neuroglian precursor, putative [Pediculus humanus corporis]
gi|212515537|gb|EEB17669.1| Neuroglian precursor, putative [Pediculus humanus corporis]
Length = 1253
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 154/586 (26%), Positives = 253/586 (43%), Gaps = 35/586 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V + C APKP+ W ++ + +GGR +G+L I V+ D+G Y+C A
Sbjct: 440 DGRTVILTCRVFGAPKPEVKWIRNSMEL-TGGRYNTLSSGDLEIKDVNFLDAGQYTCYAQ 498
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G E+ G L V + P I RC+A T+ L + W +G
Sbjct: 499 NKFGHIEASGSLSVKEH-TKITDAPEDYEIPIGTTATFRCNAVTDSTLALTIDWLKDGEV 557
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D + E + L IT + D+G Y C+ K+ + K + T+ V+ P P
Sbjct: 558 I---DFDS-EPRFVKSADYSLTITKTTELDSGVYTCLAKTDLDKAEAQATLTVQDVPNAP 613
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
++V + ++ A+I+W N PI Y I T++ + V+ + Y+
Sbjct: 614 RLIKV-QCNRMDASIRWEPLGDNRAPILSYTIQYNTSFAPDIWEVAYDNVPSIDQTYSV- 671
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ PW Y F+V+A N++G PS S T D PY+ P + G G +
Sbjct: 672 -------AMSPWVNYTFRVLARNKIGISLPSGHSEVCQTQPDVPYKNPDNVEGKGTHPNN 724
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEY 362
L ISW P+P + N +Y ++W+K + + SE + ++ + + P+ + EY
Sbjct: 725 LVISWTPMPEIEHNDEGFHYVVYWKKNIPGQNWNSEDVMDWQRSSLVISDQPT---FQEY 781
Query: 363 EVKVQAINDVGPGPESEV----VTIFSAEDMPQVAPQG-VFSRGFNSTAINVTWNPIELI 417
++KV AIN G E+ V V +S ED+P +APQ + ST ++W P+
Sbjct: 782 KIKVIAINRRG---EANVGAKEVIGYSGEDVPLMAPQNFTLVQVTTSTDALLSWLPVP-- 836
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
E++RG G++I+ W E EE + L+ P +K Y +V+ YN
Sbjct: 837 PESVRGHFKGYKIQTWSEAEGEEGMRETHVKNDATRTLVTKFIPHSKNYARVLVYNGRYN 896
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S+ T P SA + + + + W+ P I GYKV+ V
Sbjct: 897 GPPSDTLSFDTPEGVPGT-VSAFEAFPMGSSALFLVWK--KPEQPNGIITGYKVQYQTVK 953
Query: 538 QDMS---RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ I + A + L P +Y + + + G+G
Sbjct: 954 GTKVGPLVEREPFITDPSQTRAKLAGLEPNTKYRIHIRGLTRAGEG 999
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 144/636 (22%), Positives = 241/636 (37%), Gaps = 72/636 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG---SGGRRKIFENGNLLISPVSRDDSGIY 58
A EG V C P+P+ W +G I RRK+ N +++I + + D+G Y
Sbjct: 345 AAEGETVEFRCEANGVPEPQIKWIHNGLPIALAPPNPRRKVTPN-SIVIEKLDKLDTGNY 403
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G + VL P P R + L C +V W
Sbjct: 404 GCNATNSLGYVYKDVYVNVLALPPEILTSPTDKETVDGRTVILTCRVFGAPKPEVK--WI 461
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N + + N L + G LEI + +F DAG+Y C ++ G I ++ V+
Sbjct: 462 RNSMELTGGRYNTLSS-------GDLEIKDVNFLDAGQYTCYAQNKFGHIEASGSLSVKE 514
Query: 179 PPGLPGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ + E+ T+AT + + +T W E +
Sbjct: 515 HTKITDAPEDYEIPIGTTATFRCNAVTDSTLALT-----------IDWLKDGEVIDFDSE 563
Query: 238 DRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
R+ + S+ + + +A +L E + + P AP I
Sbjct: 564 PRFVKSADYSLTITKTTELDSGVYTCLAKTDLDKAEAQATLTVQDVP-----NAPRLIKV 618
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNV-GIAVVRIP 354
++ D SI WEPL + AP + Y I + +T F + + Y NV I
Sbjct: 619 QCNRM-DASIRWEPLGDNR--APILSYTIQY----NTSFAPDIWEVAYDNVPSIDQTYSV 671
Query: 355 SEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ + Y +V A N +G P SEV + D+P P V +G + + ++W
Sbjct: 672 AMSPWVNYTFRVLARNKIGISLPSGHSEVCQ--TQPDVPYKNPDNVEGKGTHPNNLVISW 729
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---ALIVGLQPD-TKYYV 467
P+ I N G H + YWK++ P + + S +W +L++ QP +Y +
Sbjct: 730 TPMPEIEHNDEGF---HYVVYWKKNIPGQN---WNSEDVMDWQRSSLVISDQPTFQEYKI 783
Query: 468 KVMAYNNAGEGPESERYL-----ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
KV+A N GE + + E APQ + ++ T ++W V P
Sbjct: 784 KVIAINRRGEANVGAKEVIGYSGEDVPLMAPQ---NFTLVQVTTSTDALLSWLPVPPESV 840
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
GYK++ W + +T + + + P + + RVL + +GR
Sbjct: 841 RGHFKGYKIQTWSEAEGEEGMRETHVK-NDATRTLVTKFIPHSKNYARVLVY----NGRY 895
Query: 583 SSPAITFQMGEEKEFKSGSPALYSA----STTLLLV 614
+ P + E G+ + + A S+ L LV
Sbjct: 896 NGPPSDTLSFDTPEGVPGTVSAFEAFPMGSSALFLV 931
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G V +FC P P+ VW KDG I R G +L+I V+ +D+G Y C
Sbjct: 253 ALRGKRVELFCIFGGTPLPQIVWSKDGQPIRLNDRMTQGHYGKSLIIKHVTFEDAGSYVC 312
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G +S + + Y+ P I A ++ RC A+ + + W HN
Sbjct: 313 EASNGVGQAKSYSIGLTVLAVPYFTVQPEIINAAEGETVEFRCEANG--VPEPQIKWIHN 370
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+ I N P + + I D G Y C +++G + V V P
Sbjct: 371 GLPIALAPPN----PRRKVTPNSIVIEKLDKLDTGNYGCNATNSLGYVYKDVYVNVLALP 426
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 129/587 (21%), Positives = 220/587 (37%), Gaps = 82/587 (13%)
Query: 24 WKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81
W KDG +I + ++ + L I+ + DSG+Y+C A E++ L V P
Sbjct: 551 WLKDGEVIDFDSEPRFVKSADYSLTITKTTELDSGVYTCLAKTDLDKAEAQATLTVQDVP 610
Query: 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLD-----VAYIWTHNGVRIGNMDLNELETPN 136
+ P I + +R + S E L D ++Y +N D+ E+ N
Sbjct: 611 N----APRLIKVQCNR---MDASIRWEPLGDNRAPILSYTIQYNTSFAP--DIWEVAYDN 661
Query: 137 INIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGPPGLP----GGVQVVEV 191
+ + + + + + + ++ +G + + + + + P +P V+
Sbjct: 662 VPSIDQTYSVAMSPWVNY-TFRVLARNKIGISLPSGHSEVCQTQPDVPYKNPDNVEGKGT 720
Query: 192 HKTSATIQWTDGAT--NGRPITHY-----KIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
H + I WT + HY K I NWNS D ++
Sbjct: 721 HPNNLVISWTPMPEIEHNDEGFHYVVYWKKNIPGQNWNSE-------------DVMDWQR 767
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG-D 303
+ + + + Y+ KVIA N G + + D P AP D
Sbjct: 768 SSLVISDQPTFQEYKIKVIAINRRGEANVGAKEVIGYSGEDVPLMAPQNFTLVQVTTSTD 827
Query: 304 LSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSET-LKEYGNVGIAVVRIPSEFYYTE 361
+SW P+P E YKI W + E ET +K + IP Y
Sbjct: 828 ALLSWLPVPPESVRGHFKGYKIQTWSEAEGEEGMRETHVKNDATRTLVTKFIPHSKNY-- 885
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMP-QVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+V N GP S+ ++ + E +P V+ F G S+A+ + W E
Sbjct: 886 --ARVLVYNGRYNGPPSDTLSFDTPEGVPGTVSAFEAFPMG--SSALFLVWKKPEQPNGI 941
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I G + ++ + P +++ ++ A + GL+P+TKY + + AGEG
Sbjct: 942 ITGYKVQYQTVKGTKVGPLVEREPFITDPSQTRAKLAGLEPNTKYRIHIRGLTRAGEG-- 999
Query: 481 SERYLERTYRKAPQKPPSAVHI--------KGINPTTVHVTWRYVSPSFEEEP----IIG 528
E ++E+ R + PP G+ TV V W P+ E +P +
Sbjct: 1000 EEYFIEQRTRGSHASPPDVPKFVWQRLPSENGL--ATVKVIWL---PNIEGKPGSHFFVK 1054
Query: 529 YKVRVWEVDQDMSRA--NDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
YK+R + + S D II G L PG+ Y +V+A
Sbjct: 1055 YKLRGEPIYLESSSELNEDYIIVRG---------LLPGEVYEFKVVA 1092
>gi|345807361|ref|XP_003435599.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Canis lupus
familiaris]
Length = 1252
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 259/603 (42%), Gaps = 62/603 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 438 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 497
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ K+T C A + L
Sbjct: 498 QAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQASFDPSLQH 549
Query: 114 AYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W +G +L E ++ I+ G L I + ++D G Y CV + + + +
Sbjct: 550 SITWRGDG-----RNLQEFGDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRA 604
Query: 173 TVIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNS 223
++V G PG +++ + H ++ + W + PI Y I +A W S
Sbjct: 605 ELLVVGSPGPVPHLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS 664
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 ---------LGK-----VPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTP 710
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 711 EAAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI--- 767
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
V ++ + + + YE+KVQA+N G GPE ++ +S ED PQ +P+ + N
Sbjct: 768 --VSDPLLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILN 825
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIV 457
S+A+ V W P++ + ++G L G+ + YW E + + ++ R A++
Sbjct: 826 SSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRRHSKRHVHRGHVVVAANTTSAVLG 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
GL+P + Y +++ A+N G GP SE T P P A+H++ + T++ + W+
Sbjct: 884 GLRPYSSYRLELRAFNGRGLGPASEMTFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ-- 939
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + GY + +D +P ++ +LSP RY ++ A +
Sbjct: 940 PPLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRTHNLTNLSPHLRYRFQLQATTKE 999
Query: 578 GDG 580
G G
Sbjct: 1000 GPG 1002
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 141/631 (22%), Positives = 241/631 (38%), Gaps = 58/631 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVAN 511
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G Q + K + + +T A+ + H W N+ E
Sbjct: 512 LQVKDATQITQGPQSA-IEKKGSKVTFTCQASFDPSLQH-----SITWRGDGRNLQEF-- 563
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + + + + +AG EL E + +P P+ S
Sbjct: 564 -GDSDKYFIEDGRLVIHSVDYSDQGNYSCVAGTELDMVEGRAELLVVGSPGPVPHLELS- 621
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E NAP Y I + K + +L K GN ++
Sbjct: 622 -DRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 678
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G ++ + +TW
Sbjct: 679 LSP---YIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETSNMVITW 735
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 736 KPLRWMDWN------APQVQYRVQWRPQGTRGAWQEQIVSDPLLVVSNTSTFVPYEIKVQ 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A N+ G+GPE + + + PQ P IK +N + V V W V P+ + + GY
Sbjct: 790 AVNSQGKGPEPQITIGYSGEDYPQASPEMEGIKILNSSAVLVRWWPVDPAQVKGHLRGYN 849
Query: 531 VRVW-------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + R + ++ NT A + L P Y + + AF+ G G S
Sbjct: 850 VTYWWEGSQRRHSKRHVHRGH--VVVAANTTSAVLGGLRPYSSYRLELRAFNGRGLGPAS 907
Query: 584 SPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 908 E--MTFSTPEGVPGHPEALHLECQSDTSLLL 936
>gi|26345264|dbj|BAC36282.1| unnamed protein product [Mus musculus]
Length = 447
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 222/445 (49%), Gaps = 29/445 (6%)
Query: 148 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG 207
NA AG Y C ++ V S ++V GPPG PGG+++ ++ TS + W+ G+ N
Sbjct: 1 NAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGLRIEDIRATSVALTWSRGSDNH 60
Query: 208 RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE 267
PI+ Y I +T + W + + G E++ L+PW YEF+V+A N
Sbjct: 61 SPISKYTIQTKTILSDDWKDAK-----TDPPIIEGNMESAKAVDLIPWMEYEFRVVATNT 115
Query: 268 LGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFW 327
LG GEPS PS + T P APS +GGGGG +L+I+W PL RE N Y + +
Sbjct: 116 LGTGEPSIPSNRIKTDGAAPNVAPSDVGGGGGTNRELTITWAPLSREYHYGNNFGYIVAF 175
Query: 328 RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ + E++ T+ + G V + + T ++VKV+A N+ G GP S V I SA+
Sbjct: 176 KPFDGEEWKKVTVTN-PDTGRYVHKDETMTPSTAFQVKVKAFNNKGDGPYSLVAVINSAQ 234
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPI-ELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446
D P AP V + +S+ I+V W + E I E+ ++I+YW + +E A + +
Sbjct: 235 DAPSEAPTEVGVKVLSSSEISVHWKHVLEKIVES-------YQIRYWAGHD-KEAAAHRV 286
Query: 447 SRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 505
T++ + A + L PDT+Y+++V A N+AG GP S+ +E RKAP P +
Sbjct: 287 QVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPSSD-VIETFTRKAPPSQPPRIISSVR 345
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVW---EVDQDMSRANDTIIPVGNTLDADIVDLS 562
+ + +TW +V E + GYK+ + D + + I V D +
Sbjct: 346 SGSRYIITWDHVVALSNESTVTGYKILYRPDGQHDGKLFSTHKHSIEVPIPRDGE----- 400
Query: 563 PGKRYHMRVLAFSNGGDGRMSSPAI 587
Y + V A S+GGDG +S I
Sbjct: 401 ----YVVEVRAHSDGGDGVVSQVKI 421
>gi|427797289|gb|JAA64096.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 1331
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 228/528 (43%), Gaps = 71/528 (13%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
VT+ C AP+P+ W K+ + +GGR ++ ++G+L I + D G Y+C A+N G
Sbjct: 422 VTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFG 480
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+ G L V G + Q P +AA ++ RC+A + L++ W NG +
Sbjct: 481 DASASGSLEV-KGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP- 538
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
E + + L IT D+G Y CV ++ + + T+ V+ P P V+
Sbjct: 539 ---EADARMVQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVK 595
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEA 246
+ + A ++W PI Y I T+++ TW + ++ +
Sbjct: 596 I-DCDGLMALVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT--------- 645
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + PW+ Y F+V+A N++G PS S + TP D P++ P R+ G G + +L I
Sbjct: 646 KFKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLI 705
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLK--------EYGNVGIAVVRI--- 353
+W P+P + NAP +YK+ W++ + D + S ++ EYG RI
Sbjct: 706 TWTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVE 765
Query: 354 ---------------------------PSEF----------YYTEYEVKVQAINDVGPGP 376
P +F + Y +KV+A N G
Sbjct: 766 AHNRRGQAHTAATEVIGYSGENVPLAAPQDFKLANVVDARXXFKPYRIKVEAHNRRGQAH 825
Query: 377 ESEVVTI-FSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK 434
+ I +S E++P APQ + ++ N TW+P+ E++RG G++I+ W
Sbjct: 826 TAATEVIGYSGENVPLAAPQDFKLANVVDARTANFTWSPVS--PESVRGHFRGYKIQTWT 883
Query: 435 EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
D EE + A + +P ++ V V+ +N+ GP S+
Sbjct: 884 PDEGEEKLREVVVPANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSD 931
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 109/555 (19%), Positives = 188/555 (33%), Gaps = 75/555 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYS 59
A G + ++C P P+ W K G RR + N L I VS +D G Y
Sbjct: 231 ALRGHELKLYCIYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYE 288
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G+ ++ + + Y+ ++P A ++ C+A + + W
Sbjct: 289 CQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFV 346
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + + N P ++G LL I + D Y+C + G + ++
Sbjct: 347 NGVPVEKAEPN----PRRKVEGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYLNVLAL 402
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP + T A Q T R ++ W ++ + G
Sbjct: 403 PPTI-----------TEAPEQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQELTGGRY- 450
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS------------SPSPQYNTPADK 286
R + I+++LV E+ A N+ G S P Y ADK
Sbjct: 451 RVLDSGDLQIDDLLVT-DQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENYEVAADK 509
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
A R +L I W +F + D E + ++ G+
Sbjct: 510 --SATFRCNAEADPSLELKIEW----------------LFNGQPVDPEADARMVQA-GDN 550
Query: 347 GIAVVR---IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ + R + S Y ++ + + +D+P P + +
Sbjct: 551 SLTITRTIELDSGIYTCVARTELDS---------DRAQATLTVQDVPN--PPQMVKIDCD 599
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
V W P + R ++ + I+Y +P+ +++ + V + P
Sbjct: 600 GLMALVEWKPT----GDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDTKFKVSMSPWA 655
Query: 464 KYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +V+A N G P T P K P V +G + +TW + P
Sbjct: 656 NYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEH 715
Query: 523 EEPIIGYKVRVWEVD 537
P YKV +W+ D
Sbjct: 716 NAPGFFYKV-LWKRD 729
>gi|301781638|ref|XP_002926235.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2-like [Ailuropoda
melanoleuca]
Length = 2167
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 154/600 (25%), Positives = 262/600 (43%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 418 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTHISDAGTYT 477
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 478 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 536
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G + P I +D G L I+ D G Y C V S G S + V
Sbjct: 537 DGATLGTEN-----NPRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 591
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 592 LPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-NAPW-----TVLLAS 645
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 646 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 700
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 701 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 760
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 761 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 815
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 816 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 873
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 874 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 930
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 931 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 988
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 177/418 (42%), Gaps = 46/418 (11%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PPG P VQ +V S + W G+ P+ +Y + R W +VS +
Sbjct: 1405 PPGKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPGGRWALHSASVSHNASA 1463
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1464 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1511
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1512 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1571
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1572 SLYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1631
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G +T ++VTW P L +N G + G++I +W+ T N
Sbjct: 1632 NVAVHGATATQLDVTWEPPPLESQN--GDIQGYKIYFWEAQRRNLTERVKTLFLAENGVK 1689
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L T Y V V A+N AG+GP S +T + AP PS+V + T+V+V+W
Sbjct: 1690 LKNLTGYTAYMVSVAAFNAAGDGPRSLPTRGQTQQAAPSA-PSSVKFSELTTTSVNVSWE 1748
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+P F + GY++ V+E + D + + L + DL+ G Y R+ A
Sbjct: 1749 --APQFPNGVLEGYRL-VYEPCTPV----DAPVKGNSPLWLKVKDLAEGMTYRFRIRA 1799
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 179/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 950 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1003
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W V H + E D R
Sbjct: 1004 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1058
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
E L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1059 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1116
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1117 WLRWVPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1168
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 1169 EEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPE 1228
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
N G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 1229 ADRN--GLVLGYKVIYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 1286
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y+V
Sbjct: 1287 DGSPSHPPILERTLDDVP-GPPVGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQV 1339
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 895 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 953
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 954 LEYRVTG---------LTALTTYTIEVAAMTAKGQGQVSASTISSGVPPELP-GAPTNLG 1003
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + +P
Sbjct: 1004 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPE 1063
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1064 LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWVPL 1123
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D +T + + I L+ T+Y V+V A+N
Sbjct: 1124 PEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1183
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W + + ++GYKV
Sbjct: 1184 IGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVIYK 1243
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1244 EKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1295
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 136/336 (40%), Gaps = 29/336 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1598 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1656
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1657 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKLKNLTGYTAYMVSVAAFNAAG 1710
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S + T + AP V +T++NV+W + G L G+R+ Y
Sbjct: 1711 DGPRS-LPTRGQTQQAAPSAPSSVKFSELTTTSVNVSWEAPQFPN----GVLEGYRLVY- 1764
Query: 434 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493
+ P + V + W + L Y ++ A GPE E + T
Sbjct: 1765 EPCTPVDAPV---KGNSPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANVT-TGPGEG 1819
Query: 494 QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP---V 550
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1820 APGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKEVT 1877
Query: 551 GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1878 SYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1911
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1828 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1884
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1885 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1918
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ + ++ +G L IS + DD+G++ C A N
Sbjct: 329 VDIPCRAKGVPPPSISWYKDAAVVEVDKLSRFWQRSDGGLQISGLVPDDTGMFQCFARNA 388
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 389 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 444
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L ++ +DAG Y C+ ++ G ++V
Sbjct: 445 -LASGSVQLPRFTLLESGSLLVSPTHISDAGTYTCLATNSRGVDEASADLVV 495
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 104/283 (36%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 130 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 189
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + + L GP+ I +A + + C A+ L+
Sbjct: 190 NDKNGDNKTSQPVTLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 249
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ IW +GV + G D N L I + +DAG YEC + S+V
Sbjct: 250 LHIIWKKDGVPLSGGLSDYNR-----------RLTIPSPMGSDAGYYECEAVLRSSSVPS 298
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I +W+
Sbjct: 299 VIRGAFLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------SWYK 347
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V ++ R+ R + ++ + LVP T F+ A N G
Sbjct: 348 DAAVVEVDKLSRFWQRSDGGLQISGLVPDDTGMFQCFARNAAG 390
>gi|148702480|gb|EDL34427.1| mCG16114 [Mus musculus]
Length = 1828
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 264/601 (43%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 94 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 153
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 154 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 212
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 213 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 266
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + V + + + W P+ Y + N N+ W ++
Sbjct: 267 QLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLMRYVLEMSEN-NAPW-----TILLA 320
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 321 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 375
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 376 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 435
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 436 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 490
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 491 WNAPS--PQFINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 548
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 549 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 605
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 606 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 663
Query: 588 T 588
+
Sbjct: 664 S 664
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 181/425 (42%), Gaps = 39/425 (9%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1081 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1139
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1247
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ YE+++ N VG GP S +F E +P APQ V +T ++VTW P
Sbjct: 1248 YLSKHRRYEIRMSIYNAVGEGPLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPP 1307
Query: 415 ELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L +N G + G++I +W + + E +L+ + + G T Y V V A
Sbjct: 1308 PL--DNQNGDIQGYKIYFWEVQRRNLTERVKTLFLAENSVKLKNLTGY---TAYMVSVAA 1362
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N AG+GP S +T + AP P S V + T+V+V+W +P F P+ GY++
Sbjct: 1363 FNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNVSWD--APQFPNGPLEGYRL 1419
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
V+E PV VD+ ++V + G R A TF
Sbjct: 1420 -VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKAKTFTY 1468
Query: 592 GEEKE 596
G E E
Sbjct: 1469 GPEIE 1473
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 195/455 (42%), Gaps = 60/455 (13%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 626 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGAPTNLG 679
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 680 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----R 733
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 734 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSL 792
Query: 305 SISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 358
+ W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 793 WLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIED 843
Query: 359 ---YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 844 LEEWTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIP 903
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 904 EADRN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRI 961
Query: 476 GEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 962 GDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI--- 1015
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1016 -----THRLNAT---TANTATVEV--LAPSARQYM 1040
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 571 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 629
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 630 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 679
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA-VVRI 353
IG S++ + P + + + E + L + GN A + +
Sbjct: 680 IS--NIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEV 737
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 738 PDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLRWM 797
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ + N +G++IKY + D +T + + I L+ T+Y V+V A+
Sbjct: 798 PLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAF 857
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N G GP S+ + RT P P+ V +++ V W + + ++GYKVR
Sbjct: 858 NAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVR 917
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 918 YKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 971
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 771 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 828
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 880
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 939
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 940 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 997
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 998 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1053
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1054 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1111
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1112 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1163
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1255 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1313
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1314 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1368
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W+ + G L G+R+ Y
Sbjct: 1369 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWDAPQFPN----GPLEGYRLVYEP 1423
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1424 CTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1481
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1482 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1539
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1540 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1575
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ G R K +G L IS + DD+G+ C A N
Sbjct: 5 VDIPCRAKGIPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNA 64
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 120
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 121 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1492 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1548
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1549 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1582
>gi|40254254|ref|NP_766388.2| protein sidekick-2 precursor [Mus musculus]
gi|81893041|sp|Q6V4S5.1|SDK2_MOUSE RecName: Full=Protein sidekick-2; Flags: Precursor
gi|34101308|gb|AAQ57661.1| sidekick 2 [Mus musculus]
Length = 2176
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 264/601 (43%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 419 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 478
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 479 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 537
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 538 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 591
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + V + + + W P+ Y + N N+ W ++
Sbjct: 592 QLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLMRYVLEMSEN-NAPW-----TILLA 645
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 646 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 700
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 701 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 760
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 761 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 815
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 816 WNAPS--PQFINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 873
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 874 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 930
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 931 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 988
Query: 588 T 588
+
Sbjct: 989 S 989
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1406 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1464
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1465 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1512
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1513 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1572
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P APQ
Sbjct: 1573 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQEVFVGEAVPTAAPQ 1632
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V +T ++VTW P L +N G + G++I +W + + E +L+ +
Sbjct: 1633 NVAIHSATATQLDVTWEPPPL--DNQNGDIQGYKIYFWEVQRRNLTERVKTLFLAENSVK 1690
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP P S V + T+V+V
Sbjct: 1691 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNV 1746
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F P+ GY++ V+E PV VD+ ++V
Sbjct: 1747 SWD--APQFPNGPLEGYRL-VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVK 1793
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1794 DLAEGMTYRFRIKAKTFTYGPEIE 1817
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 193/452 (42%), Gaps = 54/452 (11%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 951 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1007
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----RSME 1061
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1062 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 1120
Query: 308 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 358
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1121 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1171
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 1172 WTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1231
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1232 RN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDG 1289
Query: 479 -PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1290 SPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI------ 1340
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1341 --THRLNAT---TANTATVEV--LAPSARQYM 1365
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 896 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 954
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 955 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 1004
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA-VVRI 353
IG S++ + P + + + E + L + GN A + +
Sbjct: 1005 IS--NIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEV 1062
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 1063 PDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLRWM 1122
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ + N +G++IKY + D +T + + I L+ T+Y V+V A+
Sbjct: 1123 PLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAF 1182
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N G GP S+ + RT P P+ V +++ V W + + ++GYKVR
Sbjct: 1183 NAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVR 1242
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1243 YKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1296
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 1096 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 1153
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1154 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1205
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1206 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1264
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1265 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1322
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1323 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1378
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1379 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1436
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1437 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1488
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1599 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1657
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1658 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1712
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W+ + G L G+R+ Y
Sbjct: 1713 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWDAPQFPN----GPLEGYRLVYEP 1767
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1768 CTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1825
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1826 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1883
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1884 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1919
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ G R K +G L IS + DD+G+ C A N
Sbjct: 330 VDIPCRAKGVPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNA 389
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 390 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 445
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 446 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 496
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1836 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1892
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1893 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1926
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 39/275 (14%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 145 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 204
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 124
L GP+ I +A + + C A+ L+ + +W +G +
Sbjct: 205 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPLSS 264
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L I N + +DAG YEC + S+V ++ + V PP
Sbjct: 265 GISDYNR-----------RLTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQ 313
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
V+ E H T+ + D + + I TW+ + V ++ R+
Sbjct: 314 F---VREPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFK 362
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
R + ++ + L+P T + A N G + S+
Sbjct: 363 QRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 397
>gi|348558216|ref|XP_003464914.1| PREDICTED: protein sidekick-2 [Cavia porcellus]
Length = 2159
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 152/600 (25%), Positives = 259/600 (43%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 402 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 461
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + Y+W
Sbjct: 462 CLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMVCGVTHDPRVTIRYVWEK 520
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G + P I +D G L IT D G Y C V S G S + V
Sbjct: 521 DGATLATES-----NPRIRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 575
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W + V
Sbjct: 576 LPHAPEHPVATLSTTERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPWTTLLASV---- 630
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 631 ------DPEATSVMVKGLVPARSYQFRLCAVNDVGRGQFSKDTERVSLPEEPPTAPPQNV 684
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 685 IASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 744
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 745 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 799
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 800 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 857
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 858 VLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFSDILDTSLKVSWQ--EPGEKNGILTG 914
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 915 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 972
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 184/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +V+ +
Sbjct: 1389 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVNHNTSS 1447
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1448 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTVL 1495
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1496 SVTPHTTTSVLIRWQPPAEDKVNGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1555
Query: 355 SEFYYTE-------------------YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + YE+++ N VG GP S +F E +P AP+
Sbjct: 1556 SLYSMRNLSRPSLTQYELDNLNKHRWYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPR 1615
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W +++ E +L+ N
Sbjct: 1616 NVVVHGTTATQLDVTWEPPPLDSQN--GNIQGYKIYFWEAQRQNLTERVKTLFLA---EN 1670
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L T Y V V A+N AG+GP S RT + AP PS+V + T+V+V
Sbjct: 1671 GVKLKNLTGYTAYMVTVAAFNAAGDGPRSTPVQGRTQQAAPSA-PSSVKFSELTTTSVNV 1729
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F + GY++ V+E PV VD+ ++V
Sbjct: 1730 SWE--APQFPNGILEGYRL-VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVK 1776
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1777 DLAEGMTYRFRIKAKTFTYGPEIE 1800
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 178/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 934 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 990
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 991 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGMVGEGEEWLLI--HQLSNEPDA----RSME 1044
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1045 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLR 1103
Query: 308 WEPLPREKQNAP--NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + + R+ E+ +
Sbjct: 1104 WMPLPEMEYNGSPESVGYKI---KYSRSDGHGKTLSH-----VVLDRVEREYTIEDLEEW 1155
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
EY V+VQA N +G GP S VV + E +P P V + S+++ V W+ E+
Sbjct: 1156 MEYRVQVQAFNAIGSGPWSPVVLGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1213
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G++++Y ++D+ + + + + GL Y V+V+A+ G+G
Sbjct: 1214 DRNGLVLGYKVRYKEKDSDSQPHFWLVEGNASRSVQLTGLGKYVLYEVQVLAFTRIGDGS 1273
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1274 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1323
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 179/416 (43%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 879 EDVPGPVGHLSFSDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 937
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 938 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 987
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA-VVRI 353
IG S++ + P + + + E + L + N A + +
Sbjct: 988 IS--NIGPRSVTLQFRPGYDGKTSISRWLVEAQVGMVGEGEEWLLIHQLSNEPDARSMEV 1045
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 1046 PDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWM 1105
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVY-YLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G++IKY + D +T + L R R + I L+ +Y V+V A
Sbjct: 1106 PLPEMEYNGSPESVGYKIKYSRSDGHGKTLSHVVLDRVEREYT-IEDLEEWMEYRVQVQA 1164
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP S L RT P P+ V +++ V W V + ++GYKV
Sbjct: 1165 FNAIGSGPWSPVVLGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKV 1224
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
R E D D S+ + ++ + + L Y ++VLAF+ GDG S P I
Sbjct: 1225 RYKEKDSD-SQPHFWLVEGNASRSVQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1279
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 29/413 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1079 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGSPESVGYKIKYSRSDGHGKTLS-- 1136
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W Y +V A N +G G P SP T P
Sbjct: 1137 -HVVLDRVER-----EYTIED-LEEWMEYRVQVQAFNAIGSG-PWSPVVLGRTRESVPSS 1188
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1189 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVRYKEK-DSDSQPHFWLVEGNASRS 1247
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
V ++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1248 V-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1305
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ AV L+ + R + GL+P++ Y +
Sbjct: 1306 LIWQPPAAPNGIILAYQITHRL---NATAANTAAVEVLAPSARQYT-ATGLKPESVYLFR 1361
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1362 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1419
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
Y ++ E+ + + NT + L P Y RV A ++ GD
Sbjct: 1420 RYYTIQTRELPSGRWALHSASVN-HNTSSFTVDRLKPFTSYKFRVKATNDIGD 1471
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 135/339 (39%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + G L ++WEP P + QN
Sbjct: 1582 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPRNVVVHGTTATQLDVTWEPPPLDSQN 1640
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V++ + YT Y V V A N G
Sbjct: 1641 GNIQGYKIYFWEAQRQNLTERVKTLFLAENG------VKLKNLTGYTAYMVTVAAFNAAG 1694
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S V + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1695 DGPRSTPVQGRTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYE 1749
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A GPE E + T
Sbjct: 1750 PCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGP 1807
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1808 GEGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPK 1865
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1866 EVSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1902
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1819 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1875
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1876 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1909
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 107/283 (37%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 114 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 173
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + + C A+ L+
Sbjct: 174 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVIMECVANARPLIK 233
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ IW +GV++ G D N L I + + +DAG YEC + S+V
Sbjct: 234 LHIIWKKDGVQVSSGLSDYNR-----------RLTIPSPTVSDAGYYECEAVLRSSSVAP 282
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 283 VVRGAHLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYK 331
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 332 DAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNAAG 374
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 313 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRGDGGLQISGLVPDDTGMFQCFARNA 372
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 373 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 428
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 429 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 479
>gi|344236284|gb|EGV92387.1| Protein sidekick-2 [Cricetulus griseus]
Length = 2103
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/601 (25%), Positives = 265/601 (44%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 346 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 405
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 406 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 464
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 465 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 518
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + + + + + W P+ Y I+ + N+ W ++
Sbjct: 519 QLPHAPEHPVATLSTMERRAINLTWAKPFDGNSPLMRY-ILEMSENNAPW-----TILLA 572
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 573 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 627
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 628 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 687
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 688 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 742
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 743 WNAPS--PQFINGINQGYKLIAWEPTQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 800
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 801 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 857
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 858 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 915
Query: 588 T 588
+
Sbjct: 916 S 916
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1333 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1391
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1392 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1439
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1440 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1499
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P APQ
Sbjct: 1500 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPQ 1559
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V +T ++VTW P L +N G + G++I +W + + E +L+ +
Sbjct: 1560 NVAIHSATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEVQRRNLTERVKTLFLAENSVK 1617
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V + A+N AG+GP S +T + AP P S V + T+V+V
Sbjct: 1618 LKNLTGY---TAYMVSIAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNV 1673
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F P+ GY++ V+E PV VD+ ++V
Sbjct: 1674 SWE--APQFPNGPLEGYRL-VYE----------PCTPVDGVSKIVTVDVKGTGPLWLKVK 1720
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1721 DLAEGMTYRFRIKAKTFTYGPEIE 1744
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 195/458 (42%), Gaps = 66/458 (14%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 878 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGAPTNLG 931
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-----EVDRYTG 242
+ + S T+Q+ G I+ + + A+ VIG+ + + +
Sbjct: 932 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSN 980
Query: 243 RKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 981 EPDARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTAS 1040
Query: 301 IGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1041 ETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYT 1092
Query: 359 ------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+
Sbjct: 1093 IEDLEEWTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWS 1152
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
I N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 1153 EIPEADRN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAF 1210
Query: 473 NNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1211 TRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1267
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1268 --------THRLNAT---TANTATVEV--LAPSARQYM 1292
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 179/426 (42%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 823 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 881
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 882 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 931
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W + + + ++ N+ + +S
Sbjct: 932 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARS----- 986
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRG 401
+ +P +T Y +++ +N VG P S+ I + + P +AP V R
Sbjct: 987 --------MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRT 1038
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ + N +G++IKY + D +T + + I L+
Sbjct: 1039 ASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEE 1098
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S+ + RT P P+ V +++ V W + +
Sbjct: 1099 WTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1158
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GYKVR E D D S+ ++ ++ A + L Y ++VLAF+ GDG
Sbjct: 1159 RNGLVLGYKVRYKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1217
Query: 582 MSSPAI 587
S P I
Sbjct: 1218 PSHPPI 1223
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 176/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1023 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1080
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1081 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1132
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1133 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1191
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1192 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1249
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1250 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1305
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1306 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1363
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1364 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1415
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1526 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1584
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1585 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSIAAFNAAGD 1639
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1640 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWEAPQFPN----GPLEGYRLVYEP 1694
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + T W + L Y ++ A GPE E + T
Sbjct: 1695 CTPVDGVSKIVTVDVKGTGPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1752
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1753 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1810
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1811 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1846
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 72 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 131
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I +A + + C A+ L+ + IW +G + N
Sbjct: 132 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN 191
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 183
I+ L ITN + +DAG YEC + S+V ++ + V PP
Sbjct: 192 ---------GISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF- 241
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+ E H T+ + D + + I TW+ + V +++ R+ R
Sbjct: 242 --VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQR 291
Query: 244 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
+ ++ + L+P T + A N G + S+
Sbjct: 292 NDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1763 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1819
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1820 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1853
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R K +G L IS + DD+G+ C A N
Sbjct: 257 VDIPCRAKGVPPPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNA 316
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 317 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 372
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 373 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 423
>gi|37360422|dbj|BAC98189.1| mKIAA1514 protein [Mus musculus]
Length = 1994
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 264/601 (43%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 237 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 297 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 355
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 356 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 409
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + V + + + W P+ Y + N N+ W ++
Sbjct: 410 QLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLMRYVLEMSEN-NAPW-----TILLA 463
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 464 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 518
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 519 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 578
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 579 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 633
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 634 WNAPS--PQFINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 691
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 692 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 748
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 749 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 806
Query: 588 T 588
+
Sbjct: 807 S 807
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1224 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1282
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1283 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1330
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1331 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1390
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P APQ
Sbjct: 1391 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQEVFVGEAVPTAAPQ 1450
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V +T ++VTW P L +N G + G++I +W + + E +L+ +
Sbjct: 1451 NVAIHSATATQLDVTWEPPPL--DNQNGDIQGYKIYFWEVQRRNLTERVKTLFLAENSVK 1508
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP P S V + T+V+V
Sbjct: 1509 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNV 1564
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F P+ GY++ V+E PV VD+ ++V
Sbjct: 1565 SWD--APQFPNGPLEGYRL-VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVK 1611
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1612 DLAEGMTYRFRIKAKTFTYGPEIE 1635
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 195/455 (42%), Gaps = 60/455 (13%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 769 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGAPTNLG 822
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 823 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----R 876
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 877 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSL 935
Query: 305 SISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 358
+ W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 936 WLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIED 986
Query: 359 ---YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 987 LEEWTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIP 1046
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 1047 EADRN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRI 1104
Query: 476 GEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1105 GDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI--- 1158
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1159 -----THRLNAT---TANTATVEV--LAPSARQYM 1183
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 714 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 772
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 773 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 822
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA-VVRI 353
IG S++ + P + + + E + L + GN A + +
Sbjct: 823 IS--NIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEV 880
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 881 PDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLRWM 940
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ + N +G++IKY + D +T + + I L+ T+Y V+V A+
Sbjct: 941 PLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAF 1000
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N G GP S+ + RT P P+ V +++ V W + + ++GYKVR
Sbjct: 1001 NAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVR 1060
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1061 YKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1114
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 914 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 971
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 972 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1023
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1024 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1082
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1083 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1140
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1141 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1196
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1197 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1254
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1255 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1306
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1417 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1475
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1476 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1530
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W+ + G L G+R+ Y
Sbjct: 1531 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWDAPQFPN----GPLEGYRLVYEP 1585
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1586 CTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1643
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1644 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1701
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1702 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1737
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ G R K +G L IS + DD+G+ C A N
Sbjct: 148 VDIPCRAKGVPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNA 207
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 208 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 263
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 264 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 314
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1654 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1710
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1711 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1744
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K VWKKDG + SG N L I+ + D+G Y C A
Sbjct: 55 VTMECVANARPLIKLHIVWKKDGAPLSSGISDY---NRRLTIANPTVSDAGYYECEAMLR 111
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
R L VL P + + IT + + + C A + + V
Sbjct: 112 SSSVAPVTRGAYLSVLEPPQFVREPERHITAEMEKVVDIPCRAKGVPPPSITWYKDAALV 171
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G + + + DGG L+I+ D G +C + G+ T T + V
Sbjct: 172 EVGKLTRFKQRS-----DGG-LQISGLLPDDTGMLQCFAHNAAGEAQTSTYLAV 219
>gi|354466537|ref|XP_003495730.1| PREDICTED: protein sidekick-2 isoform 1 [Cricetulus griseus]
Length = 2172
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/601 (25%), Positives = 265/601 (44%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 533
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 587
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + + + + + W P+ Y I+ + N+ W ++
Sbjct: 588 QLPHAPEHPVATLSTMERRAINLTWAKPFDGNSPLMRY-ILEMSENNAPW-----TILLA 641
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 642 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 696
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 697 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 756
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 757 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 811
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 812 WNAPS--PQFINGINQGYKLIAWEPTQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 869
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 870 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 926
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 927 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 984
Query: 588 T 588
+
Sbjct: 985 S 985
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P APQ
Sbjct: 1569 SLYSMRNLTRPSLTQYELDNLSKHKRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPQ 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V +T ++VTW P L +N G + G++I +W + + E +L+ +
Sbjct: 1629 NVAIHSATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEVQRRNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V + A+N AG+GP S +T + AP P S V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSIAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F P+ GY++ V+E PV VD+ ++V
Sbjct: 1743 SWE--APQFPNGPLEGYRL-VYE----------PCTPVDGVSKIVTVDVKGTGPLWLKVK 1789
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1790 DLAEGMTYRFRIKAKTFTYGPEIE 1813
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 193/455 (42%), Gaps = 60/455 (13%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK-----EVDRYTGRKE 245
+ S T+Q+ G I+ + + A+ VIG+ + + + +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSNEPD 1052
Query: 246 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 1053 ARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETS 1112
Query: 304 LSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY--- 358
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1113 LWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIED 1164
Query: 359 ---YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 1165 LEEWTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIP 1224
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 1225 EADRN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRI 1282
Query: 476 GEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1283 GDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI--- 1336
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1337 -----THRLNAT---TANTATVEV--LAPSARQYM 1361
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 179/426 (42%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 892 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 950
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 951 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 1000
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W + + + ++ N+ + +S
Sbjct: 1001 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARS----- 1055
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRG 401
+ +P +T Y +++ +N VG P S+ I + + P +AP V R
Sbjct: 1056 --------MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRT 1107
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ + N +G++IKY + D +T + + I L+
Sbjct: 1108 ASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEE 1167
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S+ + RT P P+ V +++ V W + +
Sbjct: 1168 WTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1227
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GYKVR E D D S+ ++ ++ A + L Y ++VLAF+ GDG
Sbjct: 1228 RNGLVLGYKVRYKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1286
Query: 582 MSSPAI 587
S P I
Sbjct: 1287 PSHPPI 1292
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 176/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1484
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1654 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSIAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWEAPQFPN----GPLEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + T W + L Y ++ A GPE E + T
Sbjct: 1764 CTPVDGVSKIVTVDVKGTGPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 141 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 200
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I +A + + C A+ L+ + IW +G + N
Sbjct: 201 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN 260
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 183
I+ L ITN + +DAG YEC + S+V ++ + V PP
Sbjct: 261 ---------GISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF- 310
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+ E H T+ + D + + I TW+ + V +++ R+ R
Sbjct: 311 --VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQR 360
Query: 244 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
+ ++ + L+P T + A N G + S+
Sbjct: 361 NDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 393
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R K +G L IS + DD+G+ C A N
Sbjct: 326 VDIPCRAKGVPPPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 441
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 442 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>gi|354466539|ref|XP_003495731.1| PREDICTED: protein sidekick-2 isoform 2 [Cricetulus griseus]
Length = 2053
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/601 (25%), Positives = 265/601 (44%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 319 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 378
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 379 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 437
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 438 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 491
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + + + + + W P+ Y I+ + N+ W ++
Sbjct: 492 QLPHAPEHPVATLSTMERRAINLTWAKPFDGNSPLMRY-ILEMSENNAPW-----TILLA 545
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 546 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 600
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 601 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 660
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 661 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 715
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 716 WNAPS--PQFINGINQGYKLIAWEPTQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 773
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 774 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 830
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 831 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 888
Query: 588 T 588
+
Sbjct: 889 S 889
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 181/425 (42%), Gaps = 39/425 (9%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1306 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1364
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1365 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1412
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1413 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1472
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ YE+++ N VG GP S +F E +P APQ V +T ++VTW P
Sbjct: 1473 YLSKHKRYEIRMSVYNAVGEGPLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPP 1532
Query: 415 ELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L +N G + G++I +W + + E +L+ + + G T Y V + A
Sbjct: 1533 PLDSQN--GDIQGYKIYFWEVQRRNLTERVKTLFLAENSVKLKNLTGY---TAYMVSIAA 1587
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N AG+GP S +T + AP P S V + T+V+V+W +P F P+ GY++
Sbjct: 1588 FNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNVSWE--APQFPNGPLEGYRL 1644
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
V+E PV VD+ ++V + G R A TF
Sbjct: 1645 -VYE----------PCTPVDGVSKIVTVDVKGTGPLWLKVKDLAEGMTYRFRIKAKTFTY 1693
Query: 592 GEEKE 596
G E E
Sbjct: 1694 GPEIE 1698
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 195/458 (42%), Gaps = 66/458 (14%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 851 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGAPTNLG 904
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE-----VDRYTG 242
+ + S T+Q+ G I+ + + A+ VIG+ + + +
Sbjct: 905 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVG-----------VIGEGEEWLLIYQLSN 953
Query: 243 RKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
+A V L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 954 EPDARSMEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTAS 1013
Query: 301 IGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
L + W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 1014 ETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYT 1065
Query: 359 ------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+
Sbjct: 1066 IEDLEEWTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWS 1125
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
I N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+
Sbjct: 1126 EIPEADRN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAF 1183
Query: 473 NNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
G+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1184 TRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1240
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1241 --------THRLNAT---TANTATVEV--LAPSARQYM 1265
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 179/426 (42%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 796 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 854
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 855 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 904
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W + + + ++ N+ + +S
Sbjct: 905 ISNIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLSNEPDARS----- 959
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRG 401
+ +P +T Y +++ +N VG P S+ I + + P +AP V R
Sbjct: 960 --------MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRT 1011
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ + N +G++IKY + D +T + + I L+
Sbjct: 1012 ASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEE 1071
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S+ + RT P P+ V +++ V W + +
Sbjct: 1072 WTEYRVQVQAFNAIGSGPWSQAVMGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1131
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
++GYKVR E D D S+ ++ ++ A + L Y ++VLAF+ GDG
Sbjct: 1132 RNGLVLGYKVRYKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1190
Query: 582 MSSPAI 587
S P I
Sbjct: 1191 PSHPPI 1196
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 176/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 996 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1053
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1054 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVMGRTRESVPSS 1105
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1106 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1164
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1165 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1222
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1223 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1278
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1279 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1336
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1337 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1480 YEIRMSVYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDSQN 1538
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V + A N G
Sbjct: 1539 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSIAAFNAAGD 1593
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1594 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWEAPQFPN----GPLEGYRLVYEP 1648
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + T W + L Y ++ A GPE E + T
Sbjct: 1649 CTPVDGVSKIVTVDVKGTGPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1706
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1707 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1764
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1765 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1800
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 35/273 (12%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 45 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 104
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I +A + + C A+ L+ + IW +G + N
Sbjct: 105 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIIWRKDGALLSN 164
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGLP 183
I+ L ITN + +DAG YEC + S+V ++ + V PP
Sbjct: 165 ---------GISDYNRRLTITNPTLSDAGYYECEAVLRSSSVSPVTRGAYLSVLEPPQF- 214
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+ E H T+ + D + + I TW+ + V +++ R+ R
Sbjct: 215 --VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVEKLTRFKQR 264
Query: 244 KEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
+ ++ + L+P T + A N G + S+
Sbjct: 265 NDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 297
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1717 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1773
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1774 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1807
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R K +G L IS + DD+G+ C A N
Sbjct: 230 VDIPCRAKGVPPPSITWYKDAALVEVEKLTRFKQRNDGGLQISGLLPDDTGMLQCFAHNA 289
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 290 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 345
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 346 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 396
>gi|196016263|ref|XP_002117985.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
gi|190579458|gb|EDV19553.1| hypothetical protein TRIADDRAFT_62006 [Trichoplax adhaerens]
Length = 1318
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 239/543 (44%), Gaps = 46/543 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK--IFENGNLLISPVSRDDSGIYSCT 61
G + TI C P+P + KDG + K + NGNL+I V D+G Y CT
Sbjct: 464 RGQSSTIRCTVTGGPRPDMTYTKDGGFVDKLLYNKYTVKPNGNLVIHNVVDSDAGEYKCT 523
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
ATN +G ++ G +VL + + L I +N + C+ + L+V W G
Sbjct: 524 ATNRYGTTDATGTAVVLSATVFTKPLAATF-IRRPKNFTISCTVQKADSLNVVLYWQREG 582
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS-----TKTTVIV 176
I T N L N++ +D+G++ CV + V + + T+ V
Sbjct: 583 KNI----TTSRATVRTNGLTSTLSYYNSTLSDSGQFACVAATNVPYVGYVANPSLATLTV 638
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P E+ ++S W G N P+ + I R N ++W ++E I
Sbjct: 639 NDVPNPPFNFTYSELTRSSVLFSWLPGNPNNSPLLRFAIHYRVNNVNSW-RIAEDYIPVS 697
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RI 294
T R+ A L P++TY F+++A N +G + S+ ++T D PY AP R+
Sbjct: 698 A---TFRRIA-----LSPFNTYRFRIVAVNAVGASQDST-YQIFSTLGDVPYNAPGEFRV 748
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
G G G L I + PL RE+QN I Y++ +R++ T QS + G G R+
Sbjct: 749 SGVTGNSGALDIRFVPLSREEQNDAGINYRLSFRQQGPT--QSWSNVNTGTTG--TYRLA 804
Query: 355 SEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
T YE+++Q N+ G G +E++T + P AP+ V + + T++ + W+
Sbjct: 805 GLAQNTRYELRLQPFNNAGFGRAATEIITATTGSTAPTAAPKDVTAYLTSITSVKLRWSK 864
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-----ALIVGLQPDTKYYVK 468
I + ++ R +G+RI +W DN TTR + A I L+ Y +
Sbjct: 865 IA-VAKSARATAVGYRISFWTYDNSVA--------TTRTFGDVAEASINDLRRYMTYNFR 915
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+ G+GP S + + P + ++ P V ++++PS I
Sbjct: 916 INAFTEGGDGPFSPTVSKYIHLPVPDE---VTNLVASEPVRSQVVVQWIAPSASNGAITH 972
Query: 529 YKV 531
YKV
Sbjct: 973 YKV 975
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 137/581 (23%), Positives = 233/581 (40%), Gaps = 61/581 (10%)
Query: 22 FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL-IVLHG 80
+ W +G I + + NG+L I + R D+ +YSC A N H S G L + +
Sbjct: 390 YRWYMNGQRIVQSTKYILNANGSLTIRSLVRGDTKVYSCLAYNEHSNIVSSGWLNVTVAA 449
Query: 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET-PNINI 139
P + E + T+ ++ +RC+ D+ Y T +G + + N+ PN
Sbjct: 450 PKFVEVPYTQTTLFRGQSSTIRCTVTGGPRPDMTY--TKDGGFVDKLLYNKYTVKPN--- 504
Query: 140 DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHK-----T 194
G L I N +DAGEY+C + G T +V + + +
Sbjct: 505 --GNLVIHNVVDSDAGEYKCTATNRYGTTDATGTAVVLSATVFTKPLAATFIRRPKNFTI 562
Query: 195 SATIQWTDGAT-------NGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
S T+Q D G+ IT + RTN ++ + +
Sbjct: 563 SCTVQKADSLNVVLYWQREGKNITTSRATVRTNGLTSTLSYYNSTLSD------------ 610
Query: 248 IENVLVPWSTYEFKVIAGNELGY-GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ +F +A + Y G ++PS T D P P +
Sbjct: 611 ---------SGQFACVAATNVPYVGYVANPSLATLTVNDVP-NPPFNFTYSELTRSSVLF 660
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
SW LP N+P + + I +R N ++ ++Y V RI + T Y ++
Sbjct: 661 SW--LPGNPNNSPLLRFAIHYRVNNVNSWR--IAEDYIPVSATFRRIALSPFNT-YRFRI 715
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF--NSTAINVTWNPIELIRENIRGR 424
A+N VG +S + D+P AP G NS A+++ + P+ +N G
Sbjct: 716 VAVNAVGASQDSTYQIFSTLGDVPYNAPGEFRVSGVTGNSGALDIRFVPLSREEQNDAG- 774
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESER 483
I +R+ + ++ P ++ + TT + L GL +T+Y +++ +NNAG G +E
Sbjct: 775 -INYRLSF-RQQGPTQSWSNVNTGTTGTYRL-AGLAQNTRYELRLQPFNNAGFGRAATEI 831
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI-IGYKVRVWEVDQDMSR 542
T AP P V + T+V + W ++ + +GY++ W D ++
Sbjct: 832 ITATTGSTAPTAAPKDVTAYLTSITSVKLRWSKIAVAKSARATAVGYRISFWTYDNSVA- 890
Query: 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
T G+ +A I DL Y+ R+ AF+ GGDG S
Sbjct: 891 ---TTRTFGDVAEASINDLRRYMTYNFRINAFTEGGDGPFS 928
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
+ L P Y +++A N G +S + T P P + G+ + + R+
Sbjct: 703 IALSPFNTYRFRIVAVNAVGASQDSTYQIFSTLGDVPYNAPGEFRVSGVTGNSGALDIRF 762
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
V S EE+ G R+ Q +++ + G T + L+ RY +R+ F+N
Sbjct: 763 VPLSREEQNDAGINYRLSFRQQGPTQSWSN-VNTGTTGTYRLAGLAQNTRYELRLQPFNN 821
Query: 577 GGDGRMSSPAITFQMGE 593
G GR ++ IT G
Sbjct: 822 AGFGRAATEIITATTGS 838
>gi|324502734|gb|ADY41201.1| Neuroglian [Ascaris suum]
Length = 1047
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/585 (28%), Positives = 268/585 (45%), Gaps = 43/585 (7%)
Query: 8 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C+ +AAP+ W D +I G+ ++F N L I+ V+ D G+Y C +N
Sbjct: 310 VEMSCDVDAAPEAVVRWVDANDQSIAIIPGKIQLFPNHTLRITQVNSADEGLYYCNVSNK 369
Query: 66 HGMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
+G++ + +L V P+++ ++P K + AH + L C A T+ L+ Y WTHNGV
Sbjct: 370 YGINRAYNKLEVF-NPTHFVRVPSPKKSVVEAHESFNLFCEAVTDPRLNADYTWTHNGVP 428
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D T N L + + +G +CVV + V + +IV P P
Sbjct: 429 IN--DSEHFRTTNTT-----LHLEDVRGWHSGSIDCVVVTDVDVKVSGIELIVLDVPARP 481
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVDRYTG 242
+ V+ ++ A I+W + +G IT + + T++ W V E E + T
Sbjct: 482 -ILSEVDCNERRAMIRWQRSSDHGDKITSFLVQMHTDFEKGKWQTVLE-----EENTSTD 535
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGGKI 301
+A I L PW Y F+VIA N G +P T PY PS + G +
Sbjct: 536 FYQADI--TLSPWVNYTFRVIAKNSHGESDPGYKDGAICRTKESFPYGNPSNVTAEGNEP 593
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I W P+ + + NAP+++Y + +R ET E V+R F E
Sbjct: 594 NNLVIRWIPMDKYEWNAPDLHYIVRYRLNQQGAQWKETHIEDPLANHTVIRDQPTF--KE 651
Query: 362 YEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFS--RGFNSTAINVTWNPIELIR 418
Y V+V+A+N VG E VT FS ED+P +P FS FN T++ V W I R
Sbjct: 652 YIVQVEAVNRVGKSIIEPVSVTGFSGEDVPLESPSS-FSVIEFFNCTSVAVGWRHIN--R 708
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+ +RG G++I+YW+++ P L + RN A++ L+P T Y ++ NA
Sbjct: 709 DTVRGHFRGYQIEYWEDEKP-FVVEKVLIESDRNEAVLTDLRPITNYTARIHTV-NAHYR 766
Query: 479 PESERYLERTYRKAPQKPPSAVH---IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
ESE + + P+ PS VH ++ + TT+ +TW+ P I GY +
Sbjct: 767 SESESLISFS---TPEGIPSKVHDLRVRAVGATTLLITWQ--PPRQPNGNIRGYFL---T 818
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ S + + L ++ P Y + V A +NGG+G
Sbjct: 819 FENSTSGHVEETYVLNRQLHYLHEEVEPDTGYKVSVWAETNGGEG 863
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS---RGFNSTAINVTWNPIEL 416
T Y ++ +N ESE + FS P+ P V R +T + +TW P
Sbjct: 752 TNYTARIHTVN-AHYRSESESLISFST---PEGIPSKVHDLRVRAVGATTLLITWQPPRQ 807
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
NIRG + + + EET Y L+R L ++PDT Y V V A N G
Sbjct: 808 PNGNIRGYFLT--FENSTSGHVEET--YVLNRQLH--YLHEEVEPDTGYKVSVWAETNGG 861
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
EGP+ R + + P P + +P T V W
Sbjct: 862 EGPKVVRAIRTWPLRNPDTP--IFKVTPTSPWTAQVQW 897
>gi|395826906|ref|XP_003786654.1| PREDICTED: protein sidekick-2 [Otolemur garnettii]
Length = 2202
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 155/600 (25%), Positives = 264/600 (44%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 445 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 504
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + Y+W
Sbjct: 505 CLATNSRGVDEASADLVVW-ARTRITRPPQDQSVIKGTQASMVCGVTHDPRVTIRYVWEK 563
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L ++ D G Y C V S G S + V
Sbjct: 564 DGAALG-MENN----PRIRLDKNGSLHVSQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 618
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 619 LPHAPEHPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-NAPW-----TVLLAS 672
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 673 VD-----PEATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 727
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 728 IASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 787
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 788 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 842
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 843 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 900
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 901 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 957
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 958 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 1015
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 177/418 (42%), Gaps = 39/418 (9%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP P VQ +V S + W G+ P+ +Y + R + W S V
Sbjct: 1432 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWTLHSASV------ 1484
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
+ A I + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1485 --SHNASAFIVDRLKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTILSVTP 1542
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI----- 353
+ I W+P +K N + ++I +R+ + TL+ N +
Sbjct: 1543 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPAATWAELTPMYS 1602
Query: 354 ------PSEFYY--------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
PS Y YE+++ N VG GP S +F E +P AP+ V
Sbjct: 1603 VRNLSRPSLTQYELDNLNKHRRYEIRMSVYNTVGEGPPSPPQEVFVGEAVPTAAPRNVAV 1662
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G +T ++VTW P L +N G + G++I +W+ P T N + L
Sbjct: 1663 HGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRPNFTERVKTLFLAENSVKLKNL 1720
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
T Y V V A+N AG+GP S +T + AP P V + T+V+V+W +P
Sbjct: 1721 TGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSA-PRLVRFSELTTTSVNVSWE--AP 1777
Query: 520 SFEEEPIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
F + GY++ V+E VD +S+ + N L + DL+ G Y R+ A
Sbjct: 1778 QFPNGILEGYRL-VYEPCTPVD-GVSKIVTVDVKGSNPLWLKVKDLAEGMTYRFRIRA 1833
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 977 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1033
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1034 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLI--HQLSGEPDA----RSME 1087
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ N L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1088 VPN-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1146
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1147 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----MVQDRLEREYTIEDLEEW 1198
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S++V + E +P P V + S+++ V W+ +
Sbjct: 1199 TEYRVQVQAFNAIGSGPWSQMVMSRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADR 1258
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
N G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1259 N--GLVLGYKVMYKEKDSDAQPRSWLVEGNSSRSAQLTGLGKYVLYQVQVLAFTRVGDGT 1316
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1317 PSHPPVLERTLDDVP-GPPVGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1366
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 177/415 (42%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 922 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 980
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P P+ +G
Sbjct: 981 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GPPTNLG 1030
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL--KEYGNVGIAVVRI 353
IG S++ + P + + + E + L + G + +
Sbjct: 1031 IS--NIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVIGEGEEWLLIHQLSGEPDARSMEV 1088
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P+ +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 1089 PNLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWM 1148
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ + N +G++IKY + D +T + + I L+ T+Y V+V A+
Sbjct: 1149 PLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHMVQDRLEREYTIEDLEEWTEYRVQVQAF 1208
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N G GP S+ + RT P P+ V +++ V W V + ++GYKV
Sbjct: 1209 NAIGSGPWSQMVMSRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVM 1268
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P +
Sbjct: 1269 YKEKDSD-AQPRSWLVEGNSSRSAQLTGLGKYVLYQVQVLAFTRVGDGTPSHPPV 1322
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 189/464 (40%), Gaps = 37/464 (7%)
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
G D +E PN+N T SF + V S + S K + P P
Sbjct: 1079 GEPDARSMEVPNLN------PFTYYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPA 1131
Query: 185 GVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDR 239
V + +TS ++W + NG P + YKI +R++ + + H++ ++R
Sbjct: 1132 NVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS---HMVQDRLER 1188
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1189 -----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQMVMSRTRESVPSSGPTNVSALAT 1241
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ + W +P +N + YK+ +++K D++ Q + GN + ++ Y
Sbjct: 1242 TSSSMLVRWSDVPEADRNGLVLGYKVMYKEK-DSDAQPRSWLVEGNSSRSA-QLTGLGKY 1299
Query: 360 TEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y+V+V A VG G P V + +D+P P G+ +T++ + W P
Sbjct: 1300 VLYQVQVLAFTRVGDGTPSHPPVLERTLDDVPG-PPVGILFPEVRTTSVRLIWQPPAAPN 1358
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
I I HR+ V L+ + R + GL+P++ Y ++ A G G
Sbjct: 1359 GIILAYQITHRLN---TTTANTATVEVLAPSARQYT-ATGLKPESVYLFRITAQTRKGWG 1414
Query: 479 PESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1415 EAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPVRYYTVQTREL 1472
Query: 537 DQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
R V + A IVD L P Y RV A ++ GD
Sbjct: 1473 PS--GRWTLHSASVSHNASAFIVDRLKPFTSYKFRVKATNDIGD 1514
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 136/338 (40%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PS P + A P AP + G L ++WEP P + QN
Sbjct: 1625 YEIRMSVYNTVGEGPPSPPQEVFVGEA-VPTAAPRNVAVHGATATQLDVTWEPPPLDSQN 1683
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1684 GDIQGYKIYFWEAQRPNFTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1738
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP+ V +T++NV+W + G L G+R+ Y
Sbjct: 1739 GPRSTPTRGQTQQAAPS-APRLVRFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1793
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + +
Sbjct: 1794 CTPVDGVSKIVTVDVKGSNPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANVTTGPGE 1852
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
PP I + + + + W P + PI Y + D+ + IP
Sbjct: 1853 GAPGPPGVPVIVRYS-SAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1909
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1910 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1945
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
V+ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1862 VIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1918
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1919 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1952
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ + + +G+L IS + DD+G++ C A N
Sbjct: 356 VDIPCRAKGVPPPAITWYKDAAVVEVEKLPRFRQRGDGSLQISSLVPDDTGMFQCFARNA 415
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 416 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 472
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 473 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 522
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K +WKKDG + SG N L I + D+G Y C A
Sbjct: 263 VTMECVANARPLIKLHIMWKKDGAPLSSGISDY---NRRLTIPNPTGSDAGYYECEAILR 319
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S R L V P + ++ IT + + + C A + + A W +
Sbjct: 320 SSSVPSVVRGAYLSVWEPPQFVKEPERHITAEMEKVVDIPCRA--KGVPPPAITWYKDAA 377
Query: 123 RIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ L P G G L+I++ D G ++C ++ G++ T T + V
Sbjct: 378 VVEVEKL-----PRFRQRGDGSLQISSLVPDDTGMFQCFARNAAGEVQTSTYLAV 427
>gi|301613548|ref|XP_002936266.1| PREDICTED: neurofascin-like [Xenopus (Silurana) tropicalis]
Length = 1176
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 229/487 (47%), Gaps = 48/487 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ ENG L I+ V ++D G Y+C ATN+ G
Sbjct: 465 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYRVHENGTLEINTVRKEDQGKYTCVATNILGN 522
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---G 125
E+ RL V P+ + P ++ L C ++ L + W + ++
Sbjct: 523 AENTVRLEVKE-PTRIVKGPEDQIAKRGSSVHLDCRVRSDSSLRLTVTWIKDDTQLYINS 581
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
M +E DG L I + D G Y CV K+ + + S+K + ++ P P
Sbjct: 582 RMKKDE--------DG--LTIFGVAEKDQGAYTCVAKTELDQDSSKAYLTIQDKPDPPQD 631
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGR 243
+++ E S + W G N PIT + + + + TW N++ + V+
Sbjct: 632 LELTEPSVRSVRLTWVPGDDNNSPITGFIVQFEEDRHQPGTWHNLAS--VPANVN----- 684
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
S+ L P+ Y+F+V+A NELG PS S ++ T P P + G G +
Sbjct: 685 ---SVILQLSPYVNYQFRVLALNELGSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNN 741
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
+ I+W PL + PN+ Y + WR+++ E S + + N + V P YT+YE
Sbjct: 742 MEITWTPLNSTQAYGPNLRYNVKWRQRHTGEPWS-NITVWDNKHV-VWNTP---VYTQYE 796
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
++VQA N+ G PE + +S ED P+ AP + R NSTAI++ W + +I+G
Sbjct: 797 LRVQAENEFGKAPEPSTMIGYSGEDYPKAAPTDIKLRVMNSTAISLQWT--RVAPASIQG 854
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWA--------LIVGLQPDTKYYVKVMAYNNA 475
L+ +R +W+E + + ++SR + + ++ L P + Y + ++A N
Sbjct: 855 SLLEYRAYFWRESSLLKGV--WVSRKKQQQSFMGDRVRGIVSQLIPYSIYKLYLVAVNGR 912
Query: 476 GEGPESE 482
G+GP+S+
Sbjct: 913 GDGPKSD 919
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 121/598 (20%), Positives = 228/598 (38%), Gaps = 68/598 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSCTA 62
G N + C +PKP W +G+ G FE ++ V +S +Y C A
Sbjct: 364 GENGRLVCRASGSPKPTIQWFMNGDATEVGAPNPNFEIAGDTIIFREVQSGNSAVYQCNA 423
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
+N HG + + +L PS L P+ I + + QL C + + +
Sbjct: 424 SNEHGYLLANAFVSILDVPS--RMLGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNG 481
Query: 120 NGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
G + GN ++E G LEI D G+Y CV + +G + V+
Sbjct: 482 QGSNLDGGNYRVHE---------NGTLEINTVRKEDQGKYTCVATNILGNAENTVRLEVK 532
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P + G + ++ K +++ H R++ + ++ I +
Sbjct: 533 EPTRIVKGPED-QIAKRGSSV-------------HLDCRVRSD---SSLRLTVTWIKDDT 575
Query: 238 DRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
Y + E+ L + E + +A EL S Y T DKP P
Sbjct: 576 QLYINSRMKKDEDGLTIFGVAEKDQGAYTCVAKTELD----QDSSKAYLTIQDKP-DPPQ 630
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY-GNVGIAVV 351
+ + + ++W +P + N+P + + + + L NV ++
Sbjct: 631 DLELTEPSVRSVRLTW--VPGDDNNSPITGFIVQFEEDRHQPGTWHNLASVPANVNSVIL 688
Query: 352 RIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y Y+ +V A+N++G P P SE A P+ P V G + +
Sbjct: 689 QLSP---YVNYQFRVLALNELGSSMPSPSSERFQTAGAP--PETNPGDVKGAGTSKNNME 743
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYV 467
+TW P+ + G ++Y + T + + T + +V P T+Y +
Sbjct: 744 ITWTPLNSTQA------YGPNLRYNVKWRQRHTGEPWSNITVWDNKHVVWNTPVYTQYEL 797
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A N G+ PE + + P+ P+ + ++ +N T + + W V+P+ + ++
Sbjct: 798 RVQAENEFGKAPEPSTMIGYSGEDYPKAAPTDIKLRVMNSTAISLQWTRVAPASIQGSLL 857
Query: 528 GYKVRVWEVDQDM-----SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
Y+ W + SR +G+ + + L P Y + ++A + GDG
Sbjct: 858 EYRAYFWRESSLLKGVWVSRKKQQQSFMGDRVRGIVSQLIPYSIYKLYLVAVNGRGDG 915
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 209/543 (38%), Gaps = 71/543 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATN 64
++ + C P P +W K G + S R+ FEN N L I VS +DSG Y C A+N
Sbjct: 276 DLLLECIASGVPTPDIMWYKKGGELPS--RKLKFENFNKTLRIIGVSEEDSGEYFCQASN 333
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A N +L C A + + + +
Sbjct: 334 KMGSIRHTISVRVKAAP-YWLDEPKNLILAPGENGRLVCRASGSPKPTIQWFMNGDATEV 392
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
G PN I G + ++ Y+C + G + V I++ P +
Sbjct: 393 G------APNPNFEIAGDTIIFREVQSGNSAVYQCNASNEHGYLLANAFVSILDVPSRML 446
Query: 184 GG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD- 238
G ++V+E ++T D G PI + WF + G +D
Sbjct: 447 GPRNQLIRVIEYNRTQL-----DCPFFGSPIPTLR----------WFKNGQ---GSNLDG 488
Query: 239 -RYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI-G 295
Y + ++E N + ++ +A N LG E NT + P+RI
Sbjct: 489 GNYRVHENGTLEINTVRKEDQGKYTCVATNILGNAE--------NT-VRLEVKEPTRIVK 539
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRI 353
G +I S R + ++ ++ + W K+DT+ S K+ + I V
Sbjct: 540 GPEDQIAKRGSSVHLDCRVRSDS-SLRLTVTW-IKDDTQLYINSRMKKDEDGLTIFGVAE 597
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT A ++ +TI +D P PQ + + ++ +TW P
Sbjct: 598 KDQGAYT-----CVAKTELDQDSSKAYLTI---QDKPD-PPQDLELTEPSVRSVRLTWVP 648
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAY 472
+ I G ++ ++ED + + L+ N ++I+ L P Y +V+A
Sbjct: 649 GDDNNSPITGFIV-----QFEEDRHQPGTWHNLASVPANVNSVILQLSPYVNYQFRVLAL 703
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N G P SER+ +T P+ P V G + + +TW ++ + P + Y
Sbjct: 704 NELGSSMPSPSSERF--QTAGAPPETNPGDVKGAGTSKNNMEITWTPLNSTQAYGPNLRY 761
Query: 530 KVR 532
V+
Sbjct: 762 NVK 764
>gi|292619688|ref|XP_693332.4| PREDICTED: protein sidekick-2 [Danio rerio]
Length = 2181
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 258/601 (42%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 402 DGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYT 461
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + P ++ + C + + V ++W
Sbjct: 462 CMASNSRGIDEASADLVVW-ARTRITNPPQDQSVIKGTKATMTCGVTHDPSVSVRFVWEK 520
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I L P + +D G L I+ D G Y C V S G S + V
Sbjct: 521 DGQVIVTQGL-----PRLRLDVNGTLHISQTWSGDIGTYTCRVTSVGGNDSRNAHLRVRQ 575
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V K + + W P+ Y + N N+ W + ++ +
Sbjct: 576 LPHAPENPSAVLSSTEKRAINLTWAKPFDGNSPLIRYILEVSEN-NAPWTVLLANIEPES 634
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
A N L+P +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 635 T--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIA 686
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I +R D ++ K N + + +
Sbjct: 687 SGRTNQSIMIQWQPPPESHQNGILRGYIIRYRLTGLPVDIQY-----KNISNPDVTNLLL 741
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-- 411
+T YE++V A N G G VT ++ + +P +AP V + NST I TW
Sbjct: 742 EDLIIWTNYEIEVAAYNGAGLGVYCHKVTEWTLQGVPTIAPGNVKAEPVNSTTIRFTWTA 801
Query: 412 -NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
NP + I G G+++ W+ +ET V + + + + I GL+ ++YY
Sbjct: 802 PNP-----QFINGINQGYKLLAWEPGKEDETTVVTVRPNFQDSVHVGHIGGLKKFSEYYT 856
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S RT+ P + I T++ V+WR P+ + +
Sbjct: 857 SVLCFTTPGDGPRSSPRRLRTHEDTPGA-VGHLSFTEILDTSLKVSWR--EPNEKNGVLT 913
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++SS I
Sbjct: 914 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQLSSSTI 971
Query: 588 T 588
+
Sbjct: 972 S 972
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 173/409 (42%), Gaps = 44/409 (10%)
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V S + W G+ PI +Y + R NW +VS VDR
Sbjct: 1400 VQARSVLLSWEPGSDGLSPIRYYTVQVRELPEKNWTVHSASVSHESSSYIVDR------- 1452
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
L P+++Y+F+V A N++G + S S T D P ++P+ + + I
Sbjct: 1453 -----LKPFTSYQFRVKATNDIGDSDYSQESEAITTLQDAPDESPTILTVTPHTTTSVLI 1507
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-------- 358
W+P P EK N + ++I +R+ +S ++ + + + S +
Sbjct: 1508 CWQPPPEEKINGILLGFRIRYRELLYDRLRSFSVHTISSASASWAELTSPYSMRNLSEPS 1567
Query: 359 -----------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ YE+++ N VG GP S +F E +P PQ V + +T
Sbjct: 1568 LTQYELDNLLKHKRYEIRMSVYNAVGEGPTSSPQEVFVGEAVPTAPPQNVIIQSATATQF 1627
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+VTW+P L +N G + G++I +W+ ET + L T Y +
Sbjct: 1628 DVTWDPPPLETQN--GDIQGYKIFFWEYQRKNETEKLRTLFLPEGGVKLKNLTGYTTYMI 1685
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V A+N AG+GP S RT + AP PS +H + T+V+V+W P F I
Sbjct: 1686 SVAAFNAAGDGPRSPPTRGRTQQAAPSA-PSFIHFSELTTTSVNVSWG--EPVFPNGIIE 1742
Query: 528 GYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHMRVLA 573
GY++ ++E + + T+ GN L I DL+ G Y+ R+ A
Sbjct: 1743 GYRL-IYEPCMPVDGVSKIVTVDVKGNAPLWLKIKDLADGVTYNFRIRA 1790
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 169/437 (38%), Gaps = 54/437 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR---TNWNSTWFNVSEHVIGKE 236
PG P + EV TS + W + I Y+I R TN N+ F+ V+
Sbjct: 1288 PGPPVVILFPEVRTTSVRLIWQPPSQPNGIILAYQITYRLNSTNSNTATFD----VLNSS 1343
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--I 294
+YT L P S Y F++ A G+GE + +P Q SR +
Sbjct: 1344 ARQYTVTG-------LRPESVYVFRIRAQTRKGWGEAAEALVVTTEKRARP-QPTSRPTV 1395
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + +SWE P +P YY + R+ + + + +V
Sbjct: 1396 PQENVQARSVLLSWE--PGSDGLSPIRYYTVQVRELPEKNWTVHSASVSHESSSYIVDRL 1453
Query: 355 SEFYYTEYEVKVQAINDVGP---GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
F T Y+ +V+A ND+G ESE +T +D P +P + +T++ + W
Sbjct: 1454 KPF--TSYQFRVKATNDIGDSDYSQESEAITTL--QDAPDESPTILTVTPHTTTSVLICW 1509
Query: 412 NPIELIRENIRGRLIGHRIKYWK--EDNPEETAVYYLSRTTRNWALIVG----------- 458
P E I G L+G RI+Y + D +V+ +S + +WA +
Sbjct: 1510 QPPP--EEKINGILLGFRIRYRELLYDRLRSFSVHTISSASASWAELTSPYSMRNLSEPS 1567
Query: 459 --------LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
L +Y +++ YN GEGP S P PP V I+ T
Sbjct: 1568 LTQYELDNLLKHKRYEIRMSVYNAVGEGPTSSPQEVFVGEAVPTAPPQNVIIQSATATQF 1627
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
VTW + I GYK+ WE + + + +P G + +L+ Y
Sbjct: 1628 DVTWDPPPLETQNGDIQGYKIFFWEYQRKNETEKLRTLFLPEGG---VKLKNLTGYTTYM 1684
Query: 569 MRVLAFSNGGDGRMSSP 585
+ V AF+ GDG S P
Sbjct: 1685 ISVAAFNAAGDGPRSPP 1701
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 176/426 (41%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 879 EDTPGAVGHLSFTEILDTSLKVSWREPNEKNGVLTGYRI-SWEEYNRTNTRVTHYLPNVT 937
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP----YQAP 291
++ R TG L +TY +V A G G+ SS + P + P A
Sbjct: 938 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQLSSSTISSGVPPELPGPPTNLAI 988
Query: 292 SRIGG-------GGGKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
S IG G G SIS W+ + N + + ++ N+ + +S
Sbjct: 989 SNIGPRTVTLQFKPGYDGKTSISRWQVEAQVGVIGENEDWVMVHQRANEPDARS------ 1042
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGF 402
+ + YT Y +++ +N VG P S+ I + + P +AP V R
Sbjct: 1043 -------LEVSGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTA 1095
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ T++ + W P+ N +G+R++Y + P + ++ ++ I L+
Sbjct: 1096 SETSLWLRWVPLPEWEYNGNPDSVGYRVQYSRTGAPSKALLHVIADRLEREFTIEDLEEW 1155
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y V+V A N G GP S+ RT P P+ V +++ V W V
Sbjct: 1156 TEYEVRVQAINGIGAGPWSQPVRGRTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDR 1215
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
I+GYKV E D D T+ GN + + L Y ++VLAF+ GDGR
Sbjct: 1216 NGLILGYKVAYKEKDSDSPLQFWTV--EGNASHSVQLTGLGKYVLYEIQVLAFTRIGDGR 1273
Query: 582 MSSPAI 587
S+P+I
Sbjct: 1274 PSTPSI 1279
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 39/269 (14%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I + L+I D+G Y A N + G+ I
Sbjct: 128 PQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTGQHIT 187
Query: 78 LH-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRI 124
L GP+ +PP+ T I+ + + C A+ L+ ++ W +G VR
Sbjct: 188 LSVENVGGPADPIAPTIVIPPRNTSVISGTSEVTMECVANARPLIKLSISWKKDGVLVRS 247
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L + + + +D+G YEC + S+V +S + V PP
Sbjct: 248 GLSDFNR-----------RLTVLSPAVSDSGFYECEAVLRSSSVPAVSAGAYLHVLEPPQ 296
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
V+ E H T+ + D R + I+ W+ + + + RY
Sbjct: 297 F---VKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDAVPISPVKTPRYR 345
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELG 269
S++ N L+P T F+ A N+ G
Sbjct: 346 VLSGGSLQVNGLLPDDTGMFQCFARNQAG 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA--- 62
VT+ C A P K WKKDG ++ SG F ++SP + DSG Y C A
Sbjct: 220 VTMECVANARPLIKLSISWKKDGVLVRSG--LSDFNRRLTVLSP-AVSDSGFYECEAVLR 276
Query: 63 -TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
++V + + L VL P + ++ IT + + + C A D+ +W +
Sbjct: 277 SSSVPAVS-AGAYLHVLEPPQFVKEPEKHITAEMEKVVDIPCQARGVPQPDI--VWYKDA 333
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
V I + ++TP + GG L++ D G ++C ++ G++ T T + V
Sbjct: 334 VPI-----SPVKTPRYRVLSGGSLQVNGLLPDDTGMFQCFARNQAGEVQTNTYLAV 384
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 148/365 (40%), Gaps = 52/365 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V+A +G G PS+PS T D P P I + + + W+ P + N
Sbjct: 1259 YEIQVLAFTRIGDGRPSTPSILERTLDDVP-GPPVVILFPEVRTTSVRLIWQ--PPSQPN 1315
Query: 318 APNIYYKIFWR----KKNDTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
+ Y+I +R N F + + ++Y G+ P Y + ++ Q
Sbjct: 1316 GIILAYQITYRLNSTNSNTATFDVLNSSARQYTVTGLR----PESVYV--FRIRAQTRKG 1369
Query: 372 VGPGPESEVVTIFS-AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI 430
G E+ VVT A P P V + ++ ++W P IR + R
Sbjct: 1370 WGEAAEALVVTTEKRARPQPTSRPT-VPQENVQARSVLLSWEPGSDGLSPIRYYTVQVR- 1427
Query: 431 KYWKEDNPEET-AVYYLSRTTRNWALIVG-LQPDTKYYVKVMAYNNAGEGPES-ERYLER 487
+ PE+ V+ S + + + IV L+P T Y +V A N+ G+ S E
Sbjct: 1428 -----ELPEKNWTVHSASVSHESSSYIVDRLKPFTSYQFRVKATNDIGDSDYSQESEAIT 1482
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE---PIIGYKVRVWEVDQDMSRAN 544
T + AP + P+ + + T+V + W+ P EE+ ++G+++R E+ D R+
Sbjct: 1483 TLQDAPDESPTILTVTPHTTTSVLICWQ---PPPEEKINGILLGFRIRYRELLYDRLRSF 1539
Query: 545 DT-IIPVGNTLDADIV-------------------DLSPGKRYHMRVLAFSNGGDGRMSS 584
I + A++ +L KRY +R+ ++ G+G SS
Sbjct: 1540 SVHTISSASASWAELTSPYSMRNLSEPSLTQYELDNLLKHKRYEIRMSVYNAVGEGPTSS 1599
Query: 585 PAITF 589
P F
Sbjct: 1600 PQEVF 1604
>gi|334348522|ref|XP_001362906.2| PREDICTED: neuronal cell adhesion molecule isoform 2 [Monodelphis
domestica]
Length = 1256
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 240/564 (42%), Gaps = 56/564 (9%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 500 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 558
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 559 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 608
Query: 158 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 207
CV +++ +S + V G P P +++ + S + W G N
Sbjct: 609 TCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENN 668
Query: 208 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 265
PIT + I ++ W + ++ V G + + E L P+ Y F+VIA
Sbjct: 669 SPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAV 718
Query: 266 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
N +G PS S Y T A +P + P+ + G G + +L I+W+PL N P + YK+
Sbjct: 719 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 778
Query: 326 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
WR+K+ D E+ S + NV +V F Y VKVQA+N+VG PE ++
Sbjct: 779 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGH 833
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444
S ED+P VAP V NST V W P+ ++IRG L G+RI YWK N +
Sbjct: 834 SGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRR 891
Query: 445 YLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++ + + ++ GL+P + Y + V N GEGP S + T P P
Sbjct: 892 HVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP-- 949
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDA 556
+ +K +NPT +T + PS + Y ++ ++ ++ D IP N
Sbjct: 950 -LFLKIVNPTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSL 1007
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDG 580
+ +LS RY A + G G
Sbjct: 1008 ILRNLSYSTRYKFYFYAQTAAGTG 1031
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 234/631 (37%), Gaps = 77/631 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 485
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 486 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 538
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK--IIARTNW--------NSTWFNV 228
P + + + I G + + +IA W N F++
Sbjct: 539 PTRI--------IKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI 590
Query: 229 -SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++H+ I E D YT S++ V ++ +V+ G+ +P+P Y+
Sbjct: 591 DNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAMLRVV-------GKTPTPAPVYDR 640
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
P P + + +SW +P E+ N+P + I + D +
Sbjct: 641 P-----NPPFDLELTSFLERSVQLSW--IPGEENNSPITEFIIEYE---DAFHEPGIWHH 690
Query: 343 YGNV-GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
+V GI Y +Y +V A+N +G P SE +AE P+ P V
Sbjct: 691 QTDVPGIQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAE--PEENPTAVE 748
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P++ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 749 GIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 804
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y VKV A NN G PE + + P PS V + +N T V W V
Sbjct: 805 TPTFVPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP 864
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
P + GY++ W+V R + GN + L P Y + V
Sbjct: 865 PKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRV 924
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 604
+ G+G PA Q+ E G+P
Sbjct: 925 VNGKGEG----PASVDQVFNTPEGVPGAPLF 951
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 208/550 (37%), Gaps = 63/550 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 282 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 340
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 341 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 397
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 398 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 451
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 452 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 500
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 501 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 556
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E ++ P + + W K ND F + N + ++ I E
Sbjct: 557 --VSFE---CTVKHDPTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 605
Query: 359 YTEYEVKVQAINDVGPGPESEVV----TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T V +++ V VV T D P P + F ++ ++W P
Sbjct: 606 ATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN-PPFDLELTSFLERSVQLSWIPG 664
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVMAY 472
E I +I + ED E +++ L+ P KY +V+A
Sbjct: 665 EENNSPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAV 718
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SE Y+ T P++ P+AV G P + +TW+ + P + Y
Sbjct: 719 NSIGRSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQY 776
Query: 530 KVRVWEVDQD 539
KV + D D
Sbjct: 777 KVSWRQKDGD 786
>gi|334348524|ref|XP_003342070.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
Length = 1205
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 240/564 (42%), Gaps = 56/564 (9%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 500 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 558
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 559 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 608
Query: 158 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 207
CV +++ +S + V G P P +++ + S + W G N
Sbjct: 609 TCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENN 668
Query: 208 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 265
PIT + I ++ W + ++ V G + + E L P+ Y F+VIA
Sbjct: 669 SPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAV 718
Query: 266 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
N +G PS S Y T A +P + P+ + G G + +L I+W+PL N P + YK+
Sbjct: 719 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 778
Query: 326 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
WR+K+ D E+ S + NV +V F Y VKVQA+N+VG PE ++
Sbjct: 779 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGH 833
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444
S ED+P VAP V NST V W P+ ++IRG L G+RI YWK N +
Sbjct: 834 SGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRR 891
Query: 445 YLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++ + + ++ GL+P + Y + V N GEGP S + T P P
Sbjct: 892 HVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP-- 949
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDA 556
+ +K +NPT +T + PS + Y ++ ++ ++ D IP N
Sbjct: 950 -LFLKIVNPTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSL 1007
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDG 580
+ +LS RY A + G G
Sbjct: 1008 ILRNLSYSTRYKFYFYAQTAAGTG 1031
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 234/631 (37%), Gaps = 77/631 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 485
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 486 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 538
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK--IIARTNW--------NSTWFNV 228
P + + + I G + + +IA W N F++
Sbjct: 539 PTRI--------IKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI 590
Query: 229 -SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++H+ I E D YT S++ V ++ +V+ G+ +P+P Y+
Sbjct: 591 DNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAMLRVV-------GKTPTPAPVYDR 640
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
P P + + +SW +P E+ N+P + I + D +
Sbjct: 641 P-----NPPFDLELTSFLERSVQLSW--IPGEENNSPITEFIIEYE---DAFHEPGIWHH 690
Query: 343 YGNV-GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
+V GI Y +Y +V A+N +G P SE +AE P+ P V
Sbjct: 691 QTDVPGIQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAE--PEENPTAVE 748
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P++ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 749 GIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 804
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y VKV A NN G PE + + P PS V + +N T V W V
Sbjct: 805 TPTFVPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP 864
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
P + GY++ W+V R + GN + L P Y + V
Sbjct: 865 PKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRV 924
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 604
+ G+G PA Q+ E G+P
Sbjct: 925 VNGKGEG----PASVDQVFNTPEGVPGAPLF 951
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 208/550 (37%), Gaps = 63/550 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 282 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 340
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 341 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 397
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 398 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 451
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 452 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 500
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 501 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 556
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E ++ P + + W K ND F + N + ++ I E
Sbjct: 557 --VSFE---CTVKHDPTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 605
Query: 359 YTEYEVKVQAINDVGPGPESEVV----TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T V +++ V VV T D P P + F ++ ++W P
Sbjct: 606 ATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN-PPFDLELTSFLERSVQLSWIPG 664
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVMAY 472
E I +I + ED E +++ L+ P KY +V+A
Sbjct: 665 EENNSPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAV 718
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SE Y+ T P++ P+AV G P + +TW+ + P + Y
Sbjct: 719 NSIGRSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQY 776
Query: 530 KVRVWEVDQD 539
KV + D D
Sbjct: 777 KVSWRQKDGD 786
>gi|334348527|ref|XP_003342071.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
Length = 1174
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 240/564 (42%), Gaps = 56/564 (9%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 481 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 539
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 540 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 589
Query: 158 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 207
CV +++ +S + V G P P +++ + S + W G N
Sbjct: 590 TCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENN 649
Query: 208 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 265
PIT + I ++ W + ++ V G + + E L P+ Y F+VIA
Sbjct: 650 SPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAV 699
Query: 266 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
N +G PS S Y T A +P + P+ + G G + +L I+W+PL N P + YK+
Sbjct: 700 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 759
Query: 326 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
WR+K+ D E+ S + NV +V F Y VKVQA+N+VG PE ++
Sbjct: 760 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGH 814
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444
S ED+P VAP V NST V W P+ ++IRG L G+RI YWK N +
Sbjct: 815 SGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRR 872
Query: 445 YLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++ + + ++ GL+P + Y + V N GEGP S + T P P
Sbjct: 873 HVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP-- 930
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDA 556
+ +K +NPT +T + PS + Y ++ ++ ++ D IP N
Sbjct: 931 -LFLKIVNPTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSL 988
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDG 580
+ +LS RY A + G G
Sbjct: 989 ILRNLSYSTRYKFYFYAQTAAGTG 1012
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 234/631 (37%), Gaps = 77/631 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 350 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 406
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 407 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 466
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 467 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 519
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK--IIARTNW--------NSTWFNV 228
P + + + I G + + +IA W N F++
Sbjct: 520 PTRI--------IKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI 571
Query: 229 -SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++H+ I E D YT S++ V ++ +V+ G+ +P+P Y+
Sbjct: 572 DNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAMLRVV-------GKTPTPAPVYDR 621
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
P P + + +SW +P E+ N+P + I + D +
Sbjct: 622 P-----NPPFDLELTSFLERSVQLSW--IPGEENNSPITEFIIEYE---DAFHEPGIWHH 671
Query: 343 YGNV-GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
+V GI Y +Y +V A+N +G P SE +AE P+ P V
Sbjct: 672 QTDVPGIQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAE--PEENPTAVE 729
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P++ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 730 GIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 785
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y VKV A NN G PE + + P PS V + +N T V W V
Sbjct: 786 TPTFVPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP 845
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
P + GY++ W+V R + GN + L P Y + V
Sbjct: 846 PKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRV 905
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 604
+ G+G PA Q+ E G+P
Sbjct: 906 VNGKGEG----PASVDQVFNTPEGVPGAPLF 932
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 208/550 (37%), Gaps = 63/550 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 263 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 321
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 322 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 378
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 379 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 432
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 433 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 481
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 482 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 537
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E ++ P + + W K ND F + N + ++ I E
Sbjct: 538 --VSFE---CTVKHDPTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 586
Query: 359 YTEYEVKVQAINDVGPGPESEVV----TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T V +++ V VV T D P P + F ++ ++W P
Sbjct: 587 ATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN-PPFDLELTSFLERSVQLSWIPG 645
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVMAY 472
E I +I + ED E +++ L+ P KY +V+A
Sbjct: 646 EENNSPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAV 699
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SE Y+ T P++ P+AV G P + +TW+ + P + Y
Sbjct: 700 NSIGRSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQY 757
Query: 530 KVRVWEVDQD 539
KV + D D
Sbjct: 758 KVSWRQKDGD 767
>gi|432942191|ref|XP_004082977.1| PREDICTED: neuronal cell adhesion molecule-like [Oryzias latipes]
Length = 1264
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 243/540 (45%), Gaps = 58/540 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNI-IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70
C+ +P P W KDG I I +G + I ENG L I ++G Y+C ATN GM E
Sbjct: 438 CSSFGSPIPTISWFKDGRISIENGDQYVIHENGTLEIMVAQVLNTGKYTCVATNNLGMRE 497
Query: 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR--CSAHTEELLDVAYIWTHNGVRIGNMD 128
+ L V EQ PK + R + R C ++ L W + + D
Sbjct: 498 NSVNLEVKEPTRILEQ--PKYKVV-QRGMSARFDCKVKHDKSLIPIMTWLKDRGELP--D 552
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ P+ + + C+ + + +T + P P +++
Sbjct: 553 DERYKRPSQGVSQTMT--------------CLF------LHSHSTATLLRKPDPPTDLEL 592
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
+ + S + WT G N PI + + + + W N++E VD G K
Sbjct: 593 TDQAERSVQLTWTPGDENNSPILSFLVQYEDSLHHKGLWVNLTE------VD---GSK-T 642
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P+ Y F+V+A N +GY EPS+PS QY T P + PS + G G K ++ I
Sbjct: 643 TTQLELSPYVYYSFRVLARNNVGYSEPSNPSSQYRTNPAAPDENPSNVQGVGTKPDNMVI 702
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
SW PL + N P + YK+ W++++ D + S+ + + + V P+ Y YE+K
Sbjct: 703 SWMPLTGYQANGPGLKYKVHWKRRDMDESWSSQNVVDKSQ--LVVDGTPT---YVPYEIK 757
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+ND G GP+ E+ +S ED+P AP+ V R + T V W P+ ++RG+L
Sbjct: 758 VQALNDYGNGPDPEIAIGYSGEDVPLSAPEKVQVRVQDGTLAEVHWKPVNA--SSVRGQL 815
Query: 426 IGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
G+++ Y K E+ ++ + ++ I LQP + Y + + NN GEG
Sbjct: 816 QGYKVTYQKLRGLLGGEEEGQQREKVIVFSGDQSHGQIPDLQPFSIYRLSIKVLNNKGEG 875
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T P PPS +++ I+P ++ + P + GY +R V+Q
Sbjct: 876 PSSSNQTFETPEGVP-GPPSFLNV--ISPGLDSLSLEWGPPVNNNGRLTGYTLRYQPVNQ 932
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 23/257 (8%)
Query: 359 YTEYEVKVQAINDVG----PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
Y Y +V A N+VG P S+ T +A D QGV ++ N + ++W P+
Sbjct: 651 YVYYSFRVLARNNVGYSEPSNPSSQYRTNPAAPDENPSNVQGVGTKPDN---MVISWMPL 707
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYN 473
+ N G + +++ +WK + +E+ + L+V P Y +KV A N
Sbjct: 708 TGYQAN--GPGLKYKV-HWKRRDMDES--WSSQNVVDKSQLVVDGTPTYVPYEIKVQALN 762
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
+ G GP+ E + + P P V ++ + T V W+ V+ S + GYKV
Sbjct: 763 DYGNGPDPEIAIGYSGEDVPLSAPEKVQVRVQDGTLAEVHWKPVNASSVRGQLQGYKVTY 822
Query: 534 WEV------DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
++ +++ + I+ G+ I DL P Y + + +N G+G P+
Sbjct: 823 QKLRGLLGGEEEGQQREKVIVFSGDQSHGQIPDLQPFSIYRLSIKVLNNKGEG----PSS 878
Query: 588 TFQMGEEKEFKSGSPAL 604
+ Q E E G P+
Sbjct: 879 SNQTFETPEGVPGPPSF 895
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 12/174 (6%)
Query: 10 IFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
+ C +PKPK W +G I + R + + ++IS V S +Y C A+N G
Sbjct: 342 LTCRVNGSPKPKISWFVNGVPIENAAADRSRKVDEDTVIISNVQIGSSAVYQCNASNEFG 401
Query: 68 MDESKGRLIVLHGPSYYEQLPPKI-TIAAHRNLQLRCSAHTEELLDVAYIWTHNG-VRIG 125
+ + VL P P ++ + +R L CS+ + ++ W +G + I
Sbjct: 402 YVMANAFVSVLAEPPKMLTPPNQVYQVITNRPAFLDCSSFGSPIPTIS--WFKDGRISIE 459
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
N D + + G LEI A + G+Y CV + +G + V+ P
Sbjct: 460 NGDQYVIH------ENGTLEIMVAQVLNTGKYTCVATNNLGMRENSVNLEVKEP 507
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 29/195 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPV----SRDDSGI 57
+G + + C P A P ++ D N ++ + NG+L S V +RDD
Sbjct: 140 KGAPLVLRCQPPAGLPPPVIFWMDNNFQRLQLDERVSQALNGDLYFSNVLPEDARDD--- 196
Query: 58 YSCTATNVHGMDESKGR---LIVLHGPSYYEQLP-------PKITIAAHRN--LQLRCSA 105
Y C A H + + ++VL E+ P P T + LQL C A
Sbjct: 197 YICYARFPHTQTIQQKQPISVVVLDNNPQGERRPRILLPSEPTSTKMVLKGVLLQLECIA 256
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
DV+ W G G + N + N G +L+I++ S +DAG+Y C K+ +
Sbjct: 257 EGLPTPDVS--WQKVG---GELPNNRMALHNF---GKILQISDVSESDAGDYRCTAKNKL 308
Query: 166 GKISTKTTVIVEGPP 180
G + V V+ P
Sbjct: 309 GLVHHVIKVAVKAAP 323
>gi|334348520|ref|XP_001362822.2| PREDICTED: neuronal cell adhesion molecule isoform 1 [Monodelphis
domestica]
Length = 1298
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 240/564 (42%), Gaps = 56/564 (9%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 500 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 558
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 559 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 608
Query: 158 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 207
CV +++ +S + V G P P +++ + S + W G N
Sbjct: 609 TCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENN 668
Query: 208 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 265
PIT + I ++ W + ++ V G + + E L P+ Y F+VIA
Sbjct: 669 SPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAV 718
Query: 266 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
N +G PS S Y T A +P + P+ + G G + +L I+W+PL N P + YK+
Sbjct: 719 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 778
Query: 326 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
WR+K+ D E+ S + NV +V F Y VKVQA+N+VG PE ++
Sbjct: 779 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGH 833
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444
S ED+P VAP V NST V W P+ ++IRG L G+RI YWK N +
Sbjct: 834 SGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRR 891
Query: 445 YLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++ + + ++ GL+P + Y + V N GEGP S + T P P
Sbjct: 892 HVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP-- 949
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDA 556
+ +K +NPT +T + PS + Y ++ ++ ++ D IP N
Sbjct: 950 -LFLKIVNPTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSL 1007
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDG 580
+ +LS RY A + G G
Sbjct: 1008 ILRNLSYSTRYKFYFYAQTAAGTG 1031
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 137/633 (21%), Positives = 237/633 (37%), Gaps = 81/633 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 369 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 425
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 426 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 485
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 486 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 538
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK--IIARTNW--------NSTWFNV 228
P + + + I G + + +IA W N F++
Sbjct: 539 PTRI--------IKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI 590
Query: 229 -SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++H+ I E D YT S++ V ++ +V+ G+ +P+P Y+
Sbjct: 591 DNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAMLRVV-------GKTPTPAPVYDR 640
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
P P + + +SW +P E+ N+P + I + + F +
Sbjct: 641 P-----NPPFDLELTSFLERSVQLSW--IPGEENNSPITEFIIEY----EDAFHEPGIWH 689
Query: 343 YGNVGIAVVRIPSEFY---YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQG 396
+ + ++ +E Y +Y +V A+N +G P SE +AE P+ P
Sbjct: 690 H-QTDVPGIQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAE--PEENPTA 746
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V G + +TW P++ N G + +++ + ++D +E ++ ++ ++
Sbjct: 747 VEGIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIV 802
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
G Y VKV A NN G PE + + P PS V + +N T V W
Sbjct: 803 SGTPTFVPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEP 862
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
V P + GY++ W+V R + GN + L P Y + V
Sbjct: 863 VPPKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNV 922
Query: 572 LAFSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 604
+ G+G PA Q+ E G+P
Sbjct: 923 RVVNGKGEG----PASVDQVFNTPEGVPGAPLF 951
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 207/550 (37%), Gaps = 63/550 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 282 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 340
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 341 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 397
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 398 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 451
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 452 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 500
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 501 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 556
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E + P + + W K ND F + N + ++ I E
Sbjct: 557 --VSFECTVKHD---PTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 605
Query: 359 YTEYEVKVQAINDVGPGPESEVV----TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T V +++ V VV T D P P + F ++ ++W P
Sbjct: 606 ATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN-PPFDLELTSFLERSVQLSWIPG 664
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVMAY 472
E I +I + ED E +++ L+ P KY +V+A
Sbjct: 665 EENNSPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAV 718
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SE Y+ T P++ P+AV G P + +TW+ + P + Y
Sbjct: 719 NSIGRSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQY 776
Query: 530 KVRVWEVDQD 539
KV + D D
Sbjct: 777 KVSWRQKDGD 786
>gi|334348529|ref|XP_003342072.1| PREDICTED: neuronal cell adhesion molecule [Monodelphis domestica]
Length = 1186
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 240/564 (42%), Gaps = 56/564 (9%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ 100
+NG L I +D + Y+C N GM ++ L V +Q KI R +
Sbjct: 481 DNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKDPTRIIKQPEYKIVQRGGR-VS 539
Query: 101 LRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPN---INIDGGLLEITNASFADAGEY 157
C+ + L W D EL PN +ID L I N S D Y
Sbjct: 540 FECTVKHDPTLIATLTWLK--------DYGEL--PNDGRFSIDNDHLVIMNISDEDDATY 589
Query: 158 ECVVKSTVGKISTKTTVIVEGP----------PGLPGGVQVVEVHKTSATIQWTDGATNG 207
CV +++ +S + V G P P +++ + S + W G N
Sbjct: 590 TCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPNPPFDLELTSFLERSVQLSWIPGEENN 649
Query: 208 RPITHYKIIARTNWNS--TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAG 265
PIT + I ++ W + ++ V G + + E L P+ Y F+VIA
Sbjct: 650 SPITEFIIEYEDAFHEPGIWHHQTD-VPGIQ---------TTAELKLSPYVKYSFRVIAV 699
Query: 266 NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI 325
N +G PS S Y T A +P + P+ + G G + +L I+W+PL N P + YK+
Sbjct: 700 NSIGRSLPSEASEYYMTKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQYKV 759
Query: 326 FWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
WR+K+ D E+ S + NV +V F Y VKVQA+N+VG PE ++
Sbjct: 760 SWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNNVGFAPEPGIIIGH 814
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444
S ED+P VAP V NST V W P+ ++IRG L G+RI YWK N +
Sbjct: 815 SGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP--PKSIRGHLKGYRIYYWKVKNSSKRNRR 872
Query: 445 YLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPS 498
++ + + ++ GL+P + Y + V N GEGP S + T P P
Sbjct: 873 HVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASVDQVFNTPEGVPGAP-- 930
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDA 556
+ +K +NPT +T + PS + Y ++ ++ ++ D IP N
Sbjct: 931 -LFLKIVNPTLDSLTLEWDPPSHPNGILTAYTLKFQPINSTHELGPLVDLKIP-ANMTSL 988
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDG 580
+ +LS RY A + G G
Sbjct: 989 ILRNLSYSTRYKFYFYAQTAAGTG 1012
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 234/631 (37%), Gaps = 77/631 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G + RKI + +L S V S +Y
Sbjct: 350 GEDG--TLICRANGNPKPNISWLINGVPIEMAPDDPSRKI-DGDTILFSDVQESSSAVYQ 406
Query: 60 CTATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A+N +G + + VL P ++ + + R L C+ + + +
Sbjct: 407 CNASNEYGYLLANAFVNVLAEPPRILTEVDLRYQVITDRPAMLDCAFFGSPIPTIEWFKG 466
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + E + D G LEI A A Y CVV++ +G + V+
Sbjct: 467 TKGSVLQ-------ENTYVFHDNGTLEIPVAQKDSADTYTCVVRNKLGMAKNDVHLEVKD 519
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK--IIARTNW--------NSTWFNV 228
P + + + I G + + +IA W N F++
Sbjct: 520 PTRI--------IKQPEYKIVQRGGRVSFECTVKHDPTLIATLTWLKDYGELPNDGRFSI 571
Query: 229 -SEHV----IGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++H+ I E D YT S++ V ++ +V+ G+ +P+P Y+
Sbjct: 572 DNDHLVIMNISDEDDATYTCVANTSLDIVS---ASAMLRVV-------GKTPTPAPVYDR 621
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
P P + + +SW +P E+ N+P + I + D +
Sbjct: 622 P-----NPPFDLELTSFLERSVQLSW--IPGEENNSPITEFIIEYE---DAFHEPGIWHH 671
Query: 343 YGNV-GIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVF 398
+V GI Y +Y +V A+N +G P SE +AE P+ P V
Sbjct: 672 QTDVPGIQTTAELKLSPYVKYSFRVIAVNSIGRSLPSEASEYYMTKAAE--PEENPTAVE 729
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + +TW P++ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 730 GIGSEPDNLVITWQPLKGFDSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSG 785
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
Y VKV A NN G PE + + P PS V + +N T V W V
Sbjct: 786 TPTFVPYLVKVQALNNVGFAPEPGIIIGHSGEDLPMVAPSNVRVNVVNSTLAEVHWEPVP 845
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
P + GY++ W+V R + GN + L P Y + V
Sbjct: 846 PKSIRGHLKGYRIYYWKVKNSSKRNRRHVEKKILTFNGNKTHGMLPGLEPFSHYTLNVRV 905
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPAL 604
+ G+G PA Q+ E G+P
Sbjct: 906 VNGKGEG----PASVDQVFNTPEGVPGAPLF 932
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 208/550 (37%), Gaps = 63/550 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+++ C E P P W K+DG + + K F+ L I VS DSG Y CTA N
Sbjct: 263 LSLECIAEGLPTPSINWTKEDGELPINRTFYKNFKK-TLNIIHVSEADSGKYKCTARNSL 321
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G E + V P Y+ P + ++ + L C A+ +++ W NGV I
Sbjct: 322 GFVEHTISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPNIS--WLINGVPIEM 378
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ P+ IDG + ++ + + Y+C + G + V V P P +
Sbjct: 379 AP----DDPSRKIDGDTILFSDVQESSSAVYQCNASNEYGYLLANAFVNVLAEP--PRIL 432
Query: 187 QVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
V++ T + D A G PI + WF ++ + +E + Y
Sbjct: 433 TEVDLRYQVITDRPAMLDCAFFGSPIPTIE----------WFKGTKGSVLQE-NTYVFHD 481
Query: 245 EASIE-NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++E V S + + N+LG + + + P Q +I GG+
Sbjct: 482 NGTLEIPVAQKDSADTYTCVVRNKLGMAK-NDVHLEVKDPTRIIKQPEYKIVQRGGR--- 537
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKK-----NDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+S+E ++ P + + W K ND F + N + ++ I E
Sbjct: 538 --VSFE---CTVKHDPTLIATLTWLKDYGELPNDGRFSID------NDHLVIMNISDEDD 586
Query: 359 YTEYEVKVQAINDVGPGPESEVV----TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T V +++ V VV T D P P + F ++ ++W P
Sbjct: 587 ATYTCVANTSLDIVSASAMLRVVGKTPTPAPVYDRPN-PPFDLELTSFLERSVQLSWIPG 645
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVMAY 472
E I +I + ED E +++ L+ P KY +V+A
Sbjct: 646 EENNSPITEFIIEY------EDAFHEPGIWHHQTDVPGIQTTAELKLSPYVKYSFRVIAV 699
Query: 473 NNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N+ G SE Y+ T P++ P+AV G P + +TW+ + P + Y
Sbjct: 700 NSIGRSLPSEASEYYM--TKAAEPEENPTAVEGIGSEPDNLVITWQPLKGFDSNGPGLQY 757
Query: 530 KVRVWEVDQD 539
KV + D D
Sbjct: 758 KVSWRQKDGD 767
>gi|350590168|ref|XP_003131297.2| PREDICTED: protein sidekick-2, partial [Sus scrofa]
Length = 2201
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 154/600 (25%), Positives = 264/600 (44%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 444 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 503
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + Y+W
Sbjct: 504 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTTRYVWEK 562
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G + +++ N P + +D G L I+ D G Y C V S G S + V
Sbjct: 563 DGTTL-SLEGN----PRLRLDKSGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 617
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P++ Y + N N+ W V+
Sbjct: 618 LPHAPEHPVATLSTAERRAINLTWGKPFDGNSPLSRYILEVSEN-NAPW-----AVLLAS 671
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP TY+F++ A N++G G+ S + + + P + P P +
Sbjct: 672 VD-----PEATSVTVKGLVPARTYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 726
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 727 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 786
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 787 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 841
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 842 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 899
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 900 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 956
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 957 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 1014
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 180/441 (40%), Gaps = 52/441 (11%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1431 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPGGRWALHSASVSHNAST 1489
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1490 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPAIV 1537
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI- 353
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1538 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1597
Query: 354 ----------PSEFYY--------TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
PS Y YE+++ N VG GP S +F E +P AP+
Sbjct: 1598 PLYSVRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1657
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G +T ++VTW P L +N G + G++I +W+ T N
Sbjct: 1658 NVAVHGATATQLDVTWEPPPLESQN--GDIQGYKIYFWEAQRRNLTERVKTLFLAENGVK 1715
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
I L T Y V V A+N AG+GP S +T + AP PS+V + T+V+V+W
Sbjct: 1716 IKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSA-PSSVKFSELTTTSVNVSWE 1774
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
+P F + GY++ V+E PV VD+ G ++V +
Sbjct: 1775 --APQFPNGILEGYRL-VYE----------PCTPVDGVSKIVTVDVKGGSPLWLKVKDLA 1821
Query: 576 NGGDGRMSSPAITFQMGEEKE 596
G R A TF G E E
Sbjct: 1822 EGVTYRFRIRAKTFTYGPEIE 1842
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 181/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 976 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1029
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1030 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLTNEPDT----R 1083
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1084 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1142
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1143 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1194
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V WN E+
Sbjct: 1195 EEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWN--EV 1252
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 1253 PEADRNGLVLGYKVMYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 1312
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1313 DGVPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1365
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 921 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 979
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 980 LEYRVTG---------LTALTTYTIEVAAMTAKGQGQVSASTISSGVPPELP-GAPTNLG 1029
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + +P
Sbjct: 1030 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLTNEPDTRSMEVPD 1089
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1090 LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPL 1149
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D +T + + I L+ T+Y V+V A+N
Sbjct: 1150 PEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1209
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W V + ++GYKV
Sbjct: 1210 IGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYKVMYK 1269
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1270 EKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGVPSHPPI 1321
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 191/455 (41%), Gaps = 42/455 (9%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1121 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1178
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1179 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1230
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1231 GPTNVSALATTSSSMLVRWNEVPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1289
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1290 A-QLTGLGKYVLYEVQVLAFTRIGDGVPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1347
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + GL+P++ Y +
Sbjct: 1348 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQYT-ATGLKPESVYLFR 1403
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1404 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1461
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRM--- 582
Y ++ E+ R V + +VD L P Y RV A ++ GD
Sbjct: 1462 RYYTIQTRELPG--GRWALHSASVSHNASTFVVDRLKPFTSYKFRVKATNDIGDSEFSEE 1519
Query: 583 SSPAITFQMGEEKEFKSGSPALYSA---STTLLLV 614
S P T Q ++ +PA+ S +TT +L+
Sbjct: 1520 SEPLTTLQAAPDE-----APAIVSVTPHTTTSVLI 1549
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 135/339 (39%), Gaps = 28/339 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1624 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1682
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW +++N TE ++ L E G V+I + YT Y V V A N G
Sbjct: 1683 GDIQGYKIYFWEAQRRNLTERVKTLFLAENG------VKIKNLTGYTAYMVSVAAFNAAG 1736
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1737 DGPRSTPTRGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYE 1791
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A GPE E + T
Sbjct: 1792 PCTPVDGVSKIVTVDVKGGSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGP 1849
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1850 GEGAPGPPGVPIIARYSSAIAIHWASGDPG--KGPITRYVIEARPSDEGLWDILIKDIPK 1907
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1908 EVTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1944
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1861 IIARYSSAIAIHWASGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1917
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1918 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1951
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 104/283 (36%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 156 GEAAVIHAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 215
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + + C A+ L+
Sbjct: 216 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 275
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ IW +G + G D N L I N + +DAG YEC + S+V
Sbjct: 276 LHIIWKKDGALLSGGISDYNR-----------RLTIPNPTGSDAGYYECEAVLRSSSVPS 324
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 325 VVRGAYLSVLEPPQF---VKEPERHITAEMEKVVDVPCRAKGVPPPSI--------TWYK 373
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V + + R+ R + ++ + LVP T F+ A N G
Sbjct: 374 DAAVVEVERLSRFRQRGDGGLQISGLVPDDTGMFQCFARNAAG 416
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 355 VDVPCRAKGVPPPSITWYKDAAVVEVERLSRFRQRGDGGLQISGLVPDDTGMFQCFARNA 414
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 415 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 470
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 471 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 521
>gi|350588964|ref|XP_003482757.1| PREDICTED: neuronal cell adhesion molecule-like, partial [Sus
scrofa]
Length = 548
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 214/464 (46%), Gaps = 33/464 (7%)
Query: 137 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA 196
+D L + + + D G Y CV +T+ +S + V P P +++ + S
Sbjct: 1 FTVDKDHLVVADVNDDDGGTYTCVANTTLDNVSASAVLSVVDVPNPPFDLELTDQLDRSV 60
Query: 197 TIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVP 254
+ WT G N PIT + I + W + +E V G + + + L P
Sbjct: 61 QLSWTPGDDNNSPITKFIIEYEDVMHEAGLWHHQTE-VPGTQT---------TAQLKLSP 110
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
+ Y F+V+A N LG PS S QY T A +P + P+ + G G + +L I+W+PL
Sbjct: 111 YVNYAFRVMAVNSLGRSLPSEASEQYLTKAAEPDKNPTAVEGLGSEPDNLVITWKPLSGF 170
Query: 315 KQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
+ N P + YK+ WR+K+ D E+ S + NV +V F Y VKVQA+NDVG
Sbjct: 171 ESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLVKVQALNDVG 225
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
PE VV S ED+P VAP V NST V W+P+ L ++IRG L G+RI YW
Sbjct: 226 FAPEPAVVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVPL--KSIRGHLQGYRIYYW 283
Query: 434 KEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
K + ++ + ++ ++ GL+P + Y + V N GEGP S
Sbjct: 284 KAQSSSNRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRAFH 343
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRAND 545
T P P S +K +NPT +T + PS + Y ++ ++ ++ D
Sbjct: 344 TPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELGPLID 400
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPAIT 588
IP N + +L+ RY A + G G +++ A+T
Sbjct: 401 LKIP-ANKTRWTLKNLNFSTRYKFYFYAQTAAGSGSQITEEAVT 443
>gi|355568883|gb|EHH25164.1| hypothetical protein EGK_08937 [Macaca mulatta]
Length = 1851
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 156/603 (25%), Positives = 261/603 (43%), Gaps = 50/603 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 94 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 153
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V YIW
Sbjct: 154 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEK 212
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G ++ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 213 DGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 267
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W ++
Sbjct: 268 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPW-----TILLAS 321
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 322 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 378
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT----EFQSETLKEYGNVGIAVVR 352
G + I W+P P QN Y I W +F++ T + N+ + +
Sbjct: 379 SGRTNQSIMIQWQPPPESHQNGILKGYIIRWYCLAGLPVGYQFKNITDADVNNLLLEDLI 438
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
I +T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 439 I-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWN 493
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKV 469
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V
Sbjct: 494 APS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSV 551
Query: 470 MAYNNAGEGPESERYLERTYRKAPQK----PPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+ + G+GP S L RT+ AP P+ I + + R +SP
Sbjct: 552 LCFTTPGDGPRSAPQLVRTHEDAPTSLGPIAPNVDLIASLVEKGELMPTRGLSP------ 605
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+
Sbjct: 606 --GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAS 661
Query: 586 AIT 588
I+
Sbjct: 662 TIS 664
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 181/424 (42%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1081 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1139
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1140 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1187
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1188 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1247
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1248 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSTPQEVFVGEAVPTAAPR 1307
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L N G + G++I +W+ E +L+ +
Sbjct: 1308 NVVVHGATATQLDVTWEPPPLDSHN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1365
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1366 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1421
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1422 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1478
Query: 570 RVLA 573
R+ A
Sbjct: 1479 RIRA 1482
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 181/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 626 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGPPTNLG 679
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 680 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----R 733
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 734 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSL 792
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 793 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDL 844
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 845 EEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EV 902
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 903 PEADRNGLVLGYKVIYKEKDSDAQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 962
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 963 DGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1015
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 735 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 794
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 795 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 854
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 855 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGY 914
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 915 KVIYKEKDSD-AQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 971
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 771 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 828
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 829 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 880
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 881 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 939
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 940 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 997
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 998 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1053
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1054 ITAQTRKGWGDAAEALVVTTEKRDRPQPPSRPVVQQEDVRARSVLLSWEPGSDGL--SPV 1111
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1112 RYYTIQTRELPS--GRWTLHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1163
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G S+P + A P AP + G L ++WEP P + N
Sbjct: 1274 YEIRMSVYNAVGEGPSSTPQEVFVGEA-VPTAAPRNVVVHGATATQLDVTWEPPPLDSHN 1332
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1333 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1387
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1388 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1442
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1443 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1500
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1501 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1558
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1559 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1511 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1567
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1568 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1601
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 5 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNA 64
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 65 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 121
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 122 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 171
>gi|338729750|ref|XP_001491834.3| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
[Equus caballus]
Length = 1284
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 259/599 (43%), Gaps = 54/599 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + +G L I + +D+G Y C
Sbjct: 465 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTDGTLGIRDLQANDTGHYFC 524
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L+ + W
Sbjct: 525 QAAN----DQNNVTIVANLQVKDATQITQGPRSAIEKKGSRVTFTCQASFDPSLEHSITW 580
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G +L EL ++ I+ G L I + ++D G Y CV + + + ++ ++V
Sbjct: 581 RGDG-----HNLQELGDSDKYIIEDGRLVIHSLDYSDQGNYSCVAGTKLDVVESRAELLV 635
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 636 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 691
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 692 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEAAP 741
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ ++W+PL NAP + Y++ WR + E + V
Sbjct: 742 EKNPVDVKGEGNETNNMVVTWKPLKWMDWNAPQVQYRVQWRPQGTRGTWQEQI-----VS 796
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + YE+KVQA+N G GPE + +S ED PQ +P+ + NS+ +
Sbjct: 797 DPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPPITIGYSGEDYPQASPELEGIKILNSSTV 856
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W P++ ++G L G+ + YW E + + + ++ + A++ GL+P
Sbjct: 857 LVRWWPVDPAL--VKGHLRGYNVTYWWEGSQRKHSKRHVHKGHMVVPANATSAILGGLRP 914
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+++V A+N G GP SE T P P A+H++ + T++ + W+ P
Sbjct: 915 YSFYHLEVQAFNGRGLGPASEMTF-HTPEGVPGH-PEALHLECQSNTSLLLHWQ--PPLS 970
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D +P ++ +LSP RY ++ A + G G
Sbjct: 971 HNGVLTGYVLSYHPLDNGGKEQLSFDLPDPELRSHNLSNLSPQLRYRFQLQATTKEGPG 1029
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 143/630 (22%), Positives = 243/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G V + C + P+P+ W+ +G + + + + + G L++S + D+ + C
Sbjct: 372 GPGETVRLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNIQPSDTMVTQC 431
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG +++ + Y QLP KI + + T LL A+
Sbjct: 432 EARNRHG-------VLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 478
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 479 GAPVPSVQWLDKEGKTVLQDERFFPYTDGTLGIRDLQANDTGHYFCQAANDQNNVTIVAN 538
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H W N+ E +
Sbjct: 539 LQVKDATQITQGPRSA-IEKKGSRVTFTCQASFDPSLEH-----SITWRGDGHNLQE--L 590
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y + + L + +AG +L E + +P P S
Sbjct: 591 G-DSDKYIIEDGRLVIHSLDYSDQGNYSCVAGTKLDVVESRAELLVVGSPGPVPQLELS- 648
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 649 -DHHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 705
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P T+ + E P+ P V G + + VTW
Sbjct: 706 LSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVVTW 762
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P++ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 763 KPLKWMDWN------APQVQYRVQWRPQGTRGTWQEQIVSDPFLVVSNTSTFVPYEIKVQ 816
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A N+ G+GPE + + PQ P IK +N +TV V W V P+ + + GY
Sbjct: 817 AVNSQGKGPEPPITIGYSGEDYPQASPELEGIKILNSSTVLVRWWPVDPALVKGHLRGYN 876
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + + ++P N A + L P YH+ V AF+ G G S
Sbjct: 877 VTYWWEGSQRKHSKRHVHKGHMVVP-ANATSAILGGLRPYSFYHLEVQAFNGRGLGPASE 935
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 936 --MTFHTPEGVPGHPEALHLECQSNTSLLL 963
>gi|125813087|ref|XP_686686.2| PREDICTED: protein sidekick-1 [Danio rerio]
Length = 2126
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 160/596 (26%), Positives = 248/596 (41%), Gaps = 37/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G C APKP VW++D I+ SG R + E+G L I PV D+G Y+
Sbjct: 404 DGAVAAFTCRVSGAPKPAIVWRRDTQILASGSVQIPRFTLLESGGLQIQPVVLQDTGNYT 463
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V S + I + L C A + + V Y+W
Sbjct: 464 CYAANSEGAINASASLTVWSRTSISSPPTDRRVIKGTTAI-LECGATHDPRVGVRYVWKK 522
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ + + I++ G L I+ D G Y C V S G S + + V
Sbjct: 523 DEELVSHSRGGR-----ISLQEGSLHISQTWSGDIGNYTCDVISEAGNESKEARLEVIEL 577
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P +Q S + W P+ HY + N NS W V +V
Sbjct: 578 PHSPRNLQASLNANDSRSVDLSWMRPFDGNSPLLHYVVELSEN-NSPW-----RVYLSDV 631
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
D ++ L P +Y+F+V A N++G G+ S+ + + + P P I
Sbjct: 632 D---PSGTGAMVKGLTPARSYQFRVCAVNQVGRGQYSTETNRLMLREEPPSAPPKNIVAS 688
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q K + I I
Sbjct: 689 GRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEYQQ---KNISSPEINYCLITEL 745
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A G G S+ VT ++ + +P PQGV ++ NST I +WNP
Sbjct: 746 IIWTQYEIQVAAYTGAGLGVFSQPVTEYTLQGVPTAPPQGVEAKAVNSTTIEFSWNPPP- 804
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAYN 473
++ I G G+++ W E +PEE V ++ TR+ I GL+ + Y V+ +
Sbjct: 805 -QQFINGINQGYKLMAWPERSPEEVIVVTITPDYHGTRHLGYISGLRKFSWYLTSVLCFT 863
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP S L +T+ P P + I T++ V+W P + I GY V
Sbjct: 864 TPGNGPRSPPKLVQTFEDIP-GPVGRLSFTEILDTSLKVSWE--EPVDKNGIITGYLVS- 919
Query: 534 WEVD-QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV + SR + TLD + L+ Y + V A + G G ++S I+
Sbjct: 920 WEVQGNNQSRVARNL--ANTTLDYKVTGLTSLTTYTLEVAAMTEAGVGTVTSSTIS 973
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 184/428 (42%), Gaps = 59/428 (13%)
Query: 180 PGLPGGVQVVEVHKTS--ATIQWTDGATNGRPITHYKIIARTNWNSTWFN----VSEHVI 233
P P ++V + H S + W G P+ ++ + + + W +S +
Sbjct: 1388 PQPPRQLRVPQDHVQSRKLLLNWVPGGDGSSPVRYFTLQTQELPSGEWITHSSAISHNYS 1447
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
EVDR L P+++Y+ +++A N++G + S + T D P +AP
Sbjct: 1448 SWEVDR------------LKPFTSYKLRMMATNDVGDSKYSQETDAITTLQDVPDEAPMI 1495
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-------------NDTEFQSE-- 338
+ + W+ E N + Y++++R+ N ++ ++E
Sbjct: 1496 QSVKPSTTTSVLVQWQTPKEESVNGVLVGYRLYYRELQYDSTPQDSKRPVNSSQLRTELT 1555
Query: 339 ---TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
T+K N + + Y YE+ + A N +G P S V +F E P VAPQ
Sbjct: 1556 AKSTVKTVSNPSLTEFELTQLQKYRRYEIVMTAYNVIGESPPSAPVEVFVGEAAPSVAPQ 1615
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA-VYYLSRTTRNWA 454
+ +ST + V W P +N G + G++I YW+ D+ ET V L R N
Sbjct: 1616 NIQINTLSSTQLEVQWEPPPAETQN--GIIQGYKILYWEMDSQNETERVKILFRPETNMR 1673
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
L L T Y VK++A+N AG+GP SE RT + AP PS + + +T++V+W
Sbjct: 1674 L-KNLTSYTYYMVKLLAFNAAGDGPFSEPRRGRTLQAAPSA-PSFISFSEVTSSTLNVSW 1731
Query: 515 RY-VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD--------ADIVDLSPGK 565
+ +SP+ E GY+V V+E + + T+D + DL+ G
Sbjct: 1732 GFPLSPNGVVE---GYRV-VYEPTAPIQGVTKVV-----TVDIRGSWQRWLKVRDLTKGM 1782
Query: 566 RYHMRVLA 573
Y RV A
Sbjct: 1783 TYCFRVQA 1790
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 179/433 (41%), Gaps = 42/433 (9%)
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
K E PG G + E+ TS + W + IT Y + N+ V+
Sbjct: 874 KLVQTFEDIPGPVGRLSFTEILDTSLKVSWEEPVDKNGIITGYLVSWEVQGNNQ-SRVAR 932
Query: 231 HVIGKEVD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE-----------PSSPSP 278
++ +D + TG L +TY +V A E G G P P P
Sbjct: 933 NLANTTLDYKVTG---------LTSLTTYTLEVAAMTEAGVGTVTSSTISSGVPPELPGP 983
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQS 337
N K + + G G +IS W + + +K+ + K+ND E Q
Sbjct: 984 PSNLVISKISSRSATLKFRAGDDGKTAISKWIVEGQVGSIGEDEEWKVLYEKENDPEAQ- 1042
Query: 338 ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAP 394
++ +P+ +T Y +++ +N VGP S V+ A P VAP
Sbjct: 1043 ------------MLEVPNLTPFTHYRFRMRQVNIVGPSAVSVPSRVIQTLQAP--PDVAP 1088
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
V R + T++ + W P+ N +G+R++ + D E + L+
Sbjct: 1089 SSVTVRTASETSLWLRWVPLPESEYNGNPESVGYRVRVMRADLRGEASTRLLNDRLEREI 1148
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL+ T+Y +++ A+N+ G GP SE RT P P V + ++ + + VTW
Sbjct: 1149 TLEGLEEWTEYQLQIQAFNSIGPGPWSESVKGRTRESVPSGAPENVTAEAMSSSRILVTW 1208
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
V + I+GYKV E D D S A ++ T + +L +Y ++VLAF
Sbjct: 1209 GPVPEHEQNGNILGYKVLFKEKDSD-SEAQVNVVKGNLTQSVLLRNLRKYVQYEIQVLAF 1267
Query: 575 SNGGDGRMSSPAI 587
+ GDG++S+P +
Sbjct: 1268 TRIGDGQLSNPPV 1280
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 189/471 (40%), Gaps = 51/471 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN-WNSTWFNVSEHVIGKEVD 238
PG P + EV T + W I Y++ R + + F E +G +
Sbjct: 1289 PGPPMRLVFPEVRLTEVRVVWQPPVDPNGIIMGYQVAYRLDSGDPNQFITIE--VGPDTR 1346
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS--RIGG 296
++T L P S Y F++ A E G+G P+ ++P Q P R+
Sbjct: 1347 QFTASS-------LTPESAYIFRISAKTEQGWGSPAQAVVITTEIRERP-QPPRQLRVPQ 1398
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
+ L ++W +P ++P Y+ + ++ E+ + + N V
Sbjct: 1399 DHVQSRKLLLNW--VPGGDGSSPVRYFTLQTQELPSGEWITHSSAISHNYSSWEVDRLKP 1456
Query: 357 FYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PI 414
F T Y++++ A NDVG S E I + +D+P AP + +T++ V W P
Sbjct: 1457 F--TSYKLRMMATNDVGDSKYSQETDAITTLQDVPDEAPMIQSVKPSTTTSVLVQWQTPK 1514
Query: 415 ELIRENIRGRLIGHRIKYWK---EDNPE-------------ETAVYYLSRTTRNWAL--- 455
E E++ G L+G+R+ Y + + P+ E +T N +L
Sbjct: 1515 E---ESVNGVLVGYRLYYRELQYDSTPQDSKRPVNSSQLRTELTAKSTVKTVSNPSLTEF 1571
Query: 456 -IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ LQ +Y + + AYN GE P S AP P + I ++ T + V W
Sbjct: 1572 ELTQLQKYRRYEIVMTAYNVIGESPPSAPVEVFVGEAAPSVAPQNIQINTLSSTQLEVQW 1631
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ I GYK+ WE+D I+ T + + +L+ Y +++LAF
Sbjct: 1632 EPPPAETQNGIIQGYKILYWEMDSQNETERVKILFRPET-NMRLKNLTSYTYYMVKLLAF 1690
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAF 625
+ GDG S P + G + +P+ S S V SSTL + F
Sbjct: 1691 NAAGDGPFSEP----RRGRTLQAAPSAPSFISFSE----VTSSTLNVSWGF 1733
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 186/433 (42%), Gaps = 29/433 (6%)
Query: 160 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 214
+V + + ++ ++ PP + P V V +TS ++W + NG P + Y+
Sbjct: 1064 IVGPSAVSVPSRVIQTLQAPPDVAPSSVTVRTASETSLWLRWVPLPESEYNGNPESVGYR 1123
Query: 215 I-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273
+ + R + S ++ ++R E ++E L W+ Y+ ++ A N +G G P
Sbjct: 1124 VRVMRADLRG---EASTRLLNDRLER-----EITLEG-LEEWTEYQLQIQAFNSIGPG-P 1173
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-D 332
S S + T P AP + + ++W P+P +QN + YK+ +++K+ D
Sbjct: 1174 WSESVKGRTRESVPSGAPENVTAEAMSSSRILVTWGPVPEHEQNGNILGYKVLFKEKDSD 1233
Query: 333 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV 392
+E Q +K GN+ +V+ + + Y +YE++V A +G G S + +D
Sbjct: 1234 SEAQVNVVK--GNLTQSVL-LRNLRKYVQYEIQVLAFTRIGDGQLSNPPVLERTKDDVPG 1290
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTR 451
P + T + V W P + G ++G+++ Y + +P + + TR
Sbjct: 1291 PPMRLVFPEVRLTEVRVVWQP----PVDPNGIIMGYQVAYRLDSGDPNQFITIEVGPDTR 1346
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ L P++ Y ++ A G G P + R+ PQ PP + + + +
Sbjct: 1347 QFT-ASSLTPESAYIFRISAKTEQGWGSPAQAVVITTEIRERPQ-PPRQLRVPQDHVQSR 1404
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ +V P+ + ++ E+ + + I N ++ L P Y +R
Sbjct: 1405 KLLLNWVPGGDGSSPVRYFTLQTQELPSGEWITHSSAI-SHNYSSWEVDRLKPFTSYKLR 1463
Query: 571 VLAFSNGGDGRMS 583
++A ++ GD + S
Sbjct: 1464 MMATNDVGDSKYS 1476
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 140/358 (39%), Gaps = 32/358 (8%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L + YE + A N +G PS+P + A P AP I L + WEP
Sbjct: 1576 LQKYRRYEIVMTAYNVIGESPPSAPVEVFVGEA-APSVAPQNIQINTLSSTQLEVQWEPP 1634
Query: 312 PREKQNAPNIYYKI-FWR--KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
P E QN YKI +W +N+TE + N+ R+ + YT Y VK+ A
Sbjct: 1635 PAETQNGIIQGYKILYWEMDSQNETERVKILFRPETNM-----RLKNLTSYTYYMVKLLA 1689
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIG 427
N G GP SE + + P AP + S+ +NV+W P+ + G + G
Sbjct: 1690 FNAAGDGPFSEPRRGRTLQAAPS-APSFISFSEVTSSTLNVSWGFPL-----SPNGVVEG 1743
Query: 428 HRIKYWKEDNPEETAVYYLSRTTR----NWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
+R+ Y + P + ++ R W + L Y +V A A GPE+E
Sbjct: 1744 YRVVY-EPTAPIQGVTKVVTVDIRGSWQRWLKVRDLTKGMTYCFRVQAKTIA-YGPEAEA 1801
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
+ T P S V + I T + ++ + + GY + D+ +
Sbjct: 1802 NI--TAGPVKGSPGSPVEMS-ITKTGSMLNIQWTAGETGAGHVTGYVIEARPSDEGLW-- 1856
Query: 544 NDTII----PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
DT + P + + L G Y RVLA + G G S+P+ + F
Sbjct: 1857 -DTFVRHLPPTSTSHSVSLDRLRQGISYQFRVLAVNEFGYGEPSAPSAAMSAQVDTPF 1913
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V+G PG P + + + + IQWT G T +T Y I AR + W H+
Sbjct: 1808 VKGSPGSPVEMSITKT-GSMLNIQWTAGETGAGHVTGYVIEARPSDEGLWDTFVRHLPP- 1865
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
T + + L +Y+F+V+A NE GYGEPS+PS + D P+
Sbjct: 1866 -----TSTSHSVSLDRLRQGISYQFRVLAVNEFGYGEPSAPSAAMSAQVDTPF 1913
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 8/173 (4%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P PK W KD + + R KI + L + + D+GI+ C A N
Sbjct: 314 SVDIQCQARGVPMPKLEWYKDAVPLSKLNNPRYKIISSMGLQVRKLQPSDAGIFQCFARN 373
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + L V + P IT+ C A +W + +
Sbjct: 374 SAGEAQVHTYLDVTSMAPAFTAPPLDITVTDGAVAAFTCRVSGAP--KPAIVWRRDTQIL 431
Query: 125 GNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L+I D G Y C ++ G I+ ++ V
Sbjct: 432 AS---GSVQIPRFTLLESGGLQIQPVVLQDTGNYTCYAANSEGAINASASLTV 481
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 22/167 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G I +P + P+P+ W +DG I R I L++ + D+G Y A
Sbjct: 116 GRAAILNSPAVSCFPRPQVTWFRDGYKIIPSNRIAITLENQLVVLGTAASDAGRYYVQAV 175
Query: 64 NVHGMDESKGRLIVLHGPSYYEQ---------LPPKIT--IAAHRNLQLRCSAHTEELLD 112
N + I L+ +PP+ T +A L C A+ +
Sbjct: 176 NEKNGENKTSPSIYLNVADSEAPADPVAPVIVIPPRNTTVVAGISEATLECVANARPVEK 235
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
++ +W NGV + + + L I N + D G Y C
Sbjct: 236 LSLVWRRNGVEVAS---------GVGSFSRRLTIINPTSTDVGMYVC 273
>gi|432924655|ref|XP_004080662.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
Length = 2260
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 258/596 (43%), Gaps = 36/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 484 DGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYT 543
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ LIV + P +++ + C + + + ++W
Sbjct: 544 CMASNSRGIDEASADLIVW-ARTRITTPPQDLSVIKGTKAVMTCGVTHDPSVIIRHVWEK 602
Query: 120 NGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I N P + + G L I+ D G Y C V S G S + V
Sbjct: 603 DGSVI-----NVQSVPRMQLSADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 657
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V + K + + W P+ Y + N N+ W + ++ +
Sbjct: 658 LPHAPENPTAVLSKSEKRAIDLAWAKSFDGNSPLIRYILEVSEN-NAPWAILQANIEPES 716
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
A N L+P +Y+F++ A N++G G+ S + + + P + P +P +
Sbjct: 717 T--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETERVSLPEEPPSASPQNVIT 768
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P QN Y + +R ++Q +K + + + +
Sbjct: 769 SGRTNQSIMIQWQPPQESHQNGILRGYIVRYRLTGLPVDYQ---IKNISSPDVTTLLLED 825
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T YE++V A N G G S VT ++ + +P +AP V + NSTAI TWN
Sbjct: 826 LIIWTNYEIEVAAYNGAGLGVFSHKVTEWTLQGVPTIAPGNVKAEAVNSTAIRFTWNAPN 885
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAY 472
+ I G G+++ W+ EE A+ + + + + + GL+ T+YY V+ +
Sbjct: 886 --PQFINGINQGYKLLAWEPGKDEEVAMVTVRPNFQDSVHVGYVTGLKKFTEYYTSVLCF 943
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S RT+ P + I T++ V+W P+ + + GY++
Sbjct: 944 TTPGDGPRSPPRAVRTHEDTPGA-VGHLSFTEILDTSLKVSWS--EPNEKNGVLTGYRIS 1000
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
E ++ +R + V TL+ + L+ Y + V ++ G G +SS I+
Sbjct: 1001 WEEFNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAGMTSKGQGLLSSSTIS 1054
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 175/407 (42%), Gaps = 40/407 (9%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
V + W G+ P+ +Y + R + W V + E Y I
Sbjct: 1481 HVQARQVLLSWEPGSDGLSPVRYYTVQLRELPDKNW-TVHSASVNHEAASY-------IV 1532
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P+++Y+F++ A N++G E S S T D P +AP + + I W+
Sbjct: 1533 SRLKPFTSYQFRIKATNDIGDSEYSEESEAITTLQDAPDEAPVILSVTPHTTTSVLIRWK 1592
Query: 310 PLPREKQNAPNIYYKIFWRK------KN-----DTEFQSETL------KEYGNVGIAVVR 352
P EK N + ++I +R+ +N ++ F L + + +
Sbjct: 1593 PPSEEKINGILLGFRIHYRELLYDRLRNYIHTVNSAFTWADLTAPYSVRNLSDSTLTHYE 1652
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ + YE+++ N VG GP S +F E +P PQ V + +T ++VTW+
Sbjct: 1653 LDKLSKHKRYEIRMSVYNAVGEGPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWD 1712
Query: 413 PIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
P + +N G + G++I +W +++ E ++ + G T Y + V
Sbjct: 1713 PPPVNAQN--GDIQGYKIYFWEFQRKNGTERLRTLFMPEAGVKLKNLTGY---TNYMISV 1767
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N AG+GP S RT + AP PS +H + T+V+V+W P+F I GY
Sbjct: 1768 AAFNAAGDGPRSSPTRGRTQQAAPSA-PSFIHFSELTTTSVNVSWG--EPTFPNGIIEGY 1824
Query: 530 KVRVWEVDQDMSRANDTI---IPVGNTLDADIVDLSPGKRYHMRVLA 573
++ ++E + + T+ + L + DL+ G YH R+ A
Sbjct: 1825 RL-IYEPLTPVEGVSKTVTVDVKGSGPLWLKLRDLADGVTYHFRIRA 1870
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 165/432 (38%), Gaps = 46/432 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P G+ EV TS + W + I Y+I N +S + +V+ +
Sbjct: 1370 PGPPVGILFPEVRTTSVRLIWQSPSQPNGIILAYQITYYLN-SSNSNTATVNVLNPSARQ 1428
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 297
YT L P S Y F++ A G+GE + +P Q SR +
Sbjct: 1429 YT-------VTSLKPESVYVFRITAQTRKGWGEAAEALVVTTEKRARP-QPTSRPLVPQK 1480
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
+ + +SWE P +P YY + R+ D + + +V F
Sbjct: 1481 HVQARQVLLSWE--PGSDGLSPVRYYTVQLRELPDKNWTVHSASVNHEAASYIVSRLKPF 1538
Query: 358 YYTEYEVKVQAINDVGP---GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T Y+ +++A ND+G ESE +T +D P AP + +T++ + W P
Sbjct: 1539 --TSYQFRIKATNDIGDSEYSEESEAITTL--QDAPDEAPVILSVTPHTTTSVLIRWKPP 1594
Query: 415 ELIRENIRGRLIGHRIKYWK-------------------EDNPEETAVYYLSRTTRNWAL 455
E I G L+G RI Y + D +V LS +T
Sbjct: 1595 S--EEKINGILLGFRIHYRELLYDRLRNYIHTVNSAFTWADLTAPYSVRNLSDSTLTHYE 1652
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L +Y +++ YN GEGP S P PP V I+ T + VTW
Sbjct: 1653 LDKLSKHKRYEIRMSVYNAVGEGPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWD 1712
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQD--MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ + I GYK+ WE + R +P + +L+ Y + V A
Sbjct: 1713 PPPVNAQNGDIQGYKIYFWEFQRKNGTERLRTLFMPEAG---VKLKNLTGYTNYMISVAA 1769
Query: 574 FSNGGDGRMSSP 585
F+ GDG SSP
Sbjct: 1770 FNAAGDGPRSSP 1781
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P+ YT Y +++ +N VG P S+ I + P +AP V R + T++ +
Sbjct: 1125 LEVPNLNPYTLYRFRMRQVNIVGTSPPSQPSRKIQTLPAPPDIAPANVTLRTASETSLWL 1184
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ N +G+RI+Y++ + ++ ++ I L+ T+Y V+V
Sbjct: 1185 RWMPLPEWEYNGNAEQVGYRIQYYRVGSQGHGLIHVIADRLEREFTIEDLEEWTEYEVRV 1244
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G GP S+ RT P P+ V +++ V W V I+GY
Sbjct: 1245 QAVNHMGVGPWSQPVRGRTRESVPSSGPTNVSAFATTSSSILVRWMEVLEPDRNGLILGY 1304
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D + + A+ + T + L Y ++VLAF+ GDGR SSP I
Sbjct: 1305 KVVYKEKDSEKA-AHFWTVEGNATHSVQLSSLGKYVLYEIQVLAFTRIGDGRPSSPPI 1361
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 163/366 (44%), Gaps = 28/366 (7%)
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
HVI ++R E +IE+ L W+ YE +V A N +G G S P + T P
Sbjct: 1219 HVIADRLER-----EFTIED-LEEWTEYEVRVQAVNHMGVGPWSQPV-RGRTRESVPSSG 1271
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
P+ + + + W + +N + YK+ +++K D+E + GN
Sbjct: 1272 PTNVSAFATTSSSILVRWMEVLEPDRNGLILGYKVVYKEK-DSEKAAHFWTVEGN-ATHS 1329
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
V++ S Y YE++V A +G G P S + + +D+P P G+ +T++ +
Sbjct: 1330 VQLSSLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPG-PPVGILFPEVRTTSVRL 1388
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETA-VYYLSRTTRNWALIVGLQPDTKYYVK 468
W G ++ ++I Y+ + TA V L+ + R + + L+P++ Y +
Sbjct: 1389 IWQS----PSQPNGIILAYQITYYLNSSNSNTATVNVLNPSARQYT-VTSLKPESVYVFR 1443
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++A +P S V K + V ++W S P+
Sbjct: 1444 ITAQTRKGWGEAAEALVVTTEKRARPQPTSRPLVPQKHVQARQVLLSWEPGSDGL--SPV 1501
Query: 527 IGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMS- 583
Y V++ E+ D++ + + + V + + IV L P Y R+ A ++ GD S
Sbjct: 1502 RYYTVQLRELPDKNWTVHSAS---VNHEAASYIVSRLKPFTSYQFRIKATNDIGDSEYSE 1558
Query: 584 -SPAIT 588
S AIT
Sbjct: 1559 ESEAIT 1564
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P VW KD I R ++ G+L ++ + DD+G++ C A N+
Sbjct: 395 VDIPCQARGVPQPDIVWYKDALPIDPVKTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNM 454
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P T+ ++ L C T A W G R+
Sbjct: 455 AGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSVILHC--ETSGAPRPAITW-QKGERV- 510
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ + +DAG Y C+ ++ G +IV
Sbjct: 511 -LASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEASADLIV 561
>gi|410902571|ref|XP_003964767.1| PREDICTED: protein sidekick-2-like [Takifugu rubripes]
Length = 2173
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/599 (24%), Positives = 254/599 (42%), Gaps = 42/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 396 DGTSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYT 455
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + + P ++ + C + + V ++W
Sbjct: 456 CMASNSRGIDEASADLLVW-ARTRITKPPQDQSVIKGTKAVMTCGVTRDPSVTVRHVWEK 514
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I D+N +P + +D G L I+ D G Y C V S G S + V
Sbjct: 515 SGSAI---DVNT--SPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 569
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTN---WNSTWFNVSEHVI 233
P P V K + + W P+ Y + N W N+
Sbjct: 570 LPHAPENPIAVLSATEKRAINLTWAQAFDGNSPLIRYILEVSENNAPWTVLLANIEPEST 629
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V L+P +Y+F++ A N++G G+ S + + P + P P
Sbjct: 630 GVTV------------GGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 677
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ G + I W+P P QN P Y I + + Q +K N +
Sbjct: 678 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQ---MKNITNPDQTSLL 734
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T YE++V A N G G S VT ++ + +P V P V + NST + +TW+
Sbjct: 735 LEDLIIWTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVQAEAVNSTTVRLTWS 794
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKV 469
+ I G G+++ W+ P E ++ + + + + + GL+ T YY V
Sbjct: 795 APS--PQFINGINQGYKLLAWEPSRPSEVSMVTVRPNFQDSVHLGHVSGLKKFTDYYASV 852
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ + G+GP S RT+ P + I T++ V+W+ P + + GY
Sbjct: 853 LCFTTPGDGPRSPPQRFRTHEDTPGA-VGHLSFTDILDTSLKVSWK--EPQEKNGLLTGY 909
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
++ E ++ +R + +T + + L+ Y ++V A ++ G G++S+ I+
Sbjct: 910 RISWEEFNRTNTRVTHYL--PNSTQEYKVTGLTALTTYTIQVAAMTSKGQGQLSASTIS 966
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 176/410 (42%), Gaps = 44/410 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
EV + W G+ P+ +Y + +R ++ W V + E Y I
Sbjct: 1393 EVQARRVLLSWEPGSDGLSPVRYYTVQSRELPDNNW-TVHSASVSHETHSY-------IV 1444
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1445 TRLKPFTSYQFRVKATNDIGDSEYSQESETITTLQDAPDRAPTILSVTPHTTTSVLVRWQ 1504
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 361
P + N + +++ +R+ + ++ T++ + + VR SE T+
Sbjct: 1505 PPSEDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSSHWADLTALYSVRNLSESSLTQ 1564
Query: 362 YE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
YE +++ N VG GP S +F E +P P V + +T ++V
Sbjct: 1565 YELDNLSKHKRYEIRLSVYNAVGEGPISAPQEVFVGEAVPTSPPLNVMVQSSTATQLDVM 1624
Query: 411 WNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
W+P L +N G + G+++ +W+ + E +L + G T Y +
Sbjct: 1625 WDPPPLDAQN--GDIQGYKVYFWEYQLRNETERLRTLFLPELGVKLKNLTGY---TTYMI 1679
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V A+N AG+GP S RT + AP PS +H + T+V+V+W P I
Sbjct: 1680 SVAAFNAAGDGPRSLPTRGRTQQAAPSA-PSFIHFSELTTTSVNVSWG--EPKQANGIIE 1736
Query: 528 GYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
GY++ V+E VD +S+ + L I DL+ G Y+ R+ A
Sbjct: 1737 GYRL-VYEPCTPVD-GVSKVVTVDVKGSTPLWMKIKDLADGVTYNFRIRA 1784
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 170/385 (44%), Gaps = 44/385 (11%)
Query: 166 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 958 GQLSAST--ISSGVPPELPGPPTNLAISNIGPCSVTLQYKPGYDGKTSISRWVVEAQIGV 1015
Query: 222 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLV--PWSTYEFKVIAGNELGYGEPSSP 276
N W V H + E D A + VL P++ Y F++ N +G PS P
Sbjct: 1016 IGENEEWLLV--HQLSNEPD-------ARVLEVLDLNPYTFYRFRMRQVNIVGTSPPSQP 1066
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNI--YYKIFWRKKNDT 333
S + T P +P+ + L + W PLP + N P++ Y +W+ +
Sbjct: 1067 SRKIETLPAPPDVSPANVTLRTASETSLWLRWVPLPEWEYNGNPDLVGYRVQYWKAGSKG 1126
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAE 387
S + + R+ EF +TEYEV+VQAIN +G GP S+ V + E
Sbjct: 1127 GVLSHVIMD---------RLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPVQGRTRE 1177
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P P V + S++I V W E++ + G ++G+++ Y ++D+ + +
Sbjct: 1178 SVPTSGPANVSAFATTSSSILVRWG--EVLHTDRNGLILGYKVVYKEKDSDTAPGFWSVE 1235
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
T + + GL Y ++V+A+ G+G S LERT P PP + +
Sbjct: 1236 GNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSILERTLDDVP-GPPVGILFPEVR 1294
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKV 531
T+V + W+ P+ I+ Y++
Sbjct: 1295 TTSVRLIWQ--PPAQPNGIILAYQI 1317
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 359 YTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YT Y +++ +N VG P S+ I + P V+P V R + T++ + W P+
Sbjct: 1045 YTFYRFRMRQVNIVGTSPPSQPSRKIETLPAPPDVSPANVTLRTASETSLWLRWVPLPEW 1104
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
N L+G+R++YWK + + + I L+ T+Y V+V A N G
Sbjct: 1105 EYNGNPDLVGYRVQYWKAGSKGGVLSHVIMDRLEREFTIEDLEEWTEYEVRVQAINGIGS 1164
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S+ RT P P+ V +++ V W V + I+GYKV E D
Sbjct: 1165 GPWSQPVQGRTRESVPTSGPANVSAFATTSSSILVRWGEVLHTDRNGLILGYKVVYKEKD 1224
Query: 538 QDMSRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D + ++ GNT + + L Y ++VLAF+ GDGR SSP+I
Sbjct: 1225 SDTAPGFWSV--EGNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSI 1273
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 170/434 (39%), Gaps = 48/434 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P G+ EV TS + W A I Y+I R N +S + V+ +
Sbjct: 1282 PGPPVGILFPEVRTTSVRLIWQPPAQPNGIILAYQITYRRN-SSNINAATVDVLSPSARQ 1340
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 297
YT ++ LV Y F++ A G+GE + +P Q SR +
Sbjct: 1341 YTA---TGLKAELV----YVFRLTAQTRKGWGEAAEALVVTTEKRARP-QPTSRPVVPQE 1392
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIPS 355
+ + +SWE P +P YY + R+ D + S ++ + I P
Sbjct: 1393 EVQARRVLLSWE--PGSDGLSPVRYYTVQSRELPDNNWTVHSASVSHETHSYIVTRLKP- 1449
Query: 356 EFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+ +V+A ND+G S E TI + +D P AP + +T++ V W P
Sbjct: 1450 ---FTSYQFRVKATNDIGDSEYSQESETITTLQDAPDRAPTILSVTPHTTTSVLVRWQPP 1506
Query: 415 ELIRENIRGRLIGHRIKY--WKEDNPEETAVYYLSRTTRNWALIVG-------------- 458
++I G L+G R++Y D V ++ + +WA +
Sbjct: 1507 S--EDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSSHWADLTALYSVRNLSESSLTQ 1564
Query: 459 -----LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L +Y +++ YN GEGP S P PP V ++ T + V
Sbjct: 1565 YELDNLSKHKRYEIRLSVYNAVGEGPISAPQEVFVGEAVPTSPPLNVMVQSSTATQLDVM 1624
Query: 514 WRYVSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
W + I GYKV WE + + R +P L + +L+ Y + V
Sbjct: 1625 WDPPPLDAQNGDIQGYKVYFWEYQLRNETERLRTLFLP---ELGVKLKNLTGYTTYMISV 1681
Query: 572 LAFSNGGDGRMSSP 585
AF+ GDG S P
Sbjct: 1682 AAFNAAGDGPRSLP 1695
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 197 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256
T+ WT G PIT Y I AR + W ++ I KEV YT + E +
Sbjct: 1822 TLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDMLREGL----- 1875
Query: 257 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
TY+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1876 TYDFRVIAVNDYGYGTPSAPSPSISAQKVSPF 1907
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 5 GGNVTIF-CNPEAAP--KPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGI 57
G N I C A P K W+KDG ++ +G GRR L+IS DSG
Sbjct: 210 GRNEAIMECVANARPLVKMSITWRKDGVMVNTGIRDFGRR-------LVISLPMVSDSGY 262
Query: 58 YSCTAT--NVHGMDESKGRLI-VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
Y C A+ + S G + VL P + ++ P I+ + + + C A D+
Sbjct: 263 YECEASLRSSSAPPVSAGAFLHVLEYPLFVKEPPSHISAEMEKVVDIPCQARGTPQPDI- 321
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
+W + V I + + + GG L+I D G ++C ++ G+I T T +
Sbjct: 322 -VWYKDAVPISPVKIPRYRV----LVGGSLQINGLLPDDTGMFQCFARNLAGEIQTNTYL 376
Query: 175 IV 176
V
Sbjct: 377 AV 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 137/350 (39%), Gaps = 28/350 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G S+P + A P P + L + W+P P + QN
Sbjct: 1576 YEIRLSVYNAVGEGPISAPQEVFVGEA-VPTSPPLNVMVQSSTATQLDVMWDPPPLDAQN 1634
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YK+ FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1635 GDIQGYKVYFWEYQLRNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1688
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP + +T++NV+W E + N G + G+R+ Y
Sbjct: 1689 DGPRSLPTRGRTQQAAPS-APSFIHFSELTTTSVNVSWG--EPKQAN--GIIEGYRLVYE 1743
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + +T W I L Y ++ A GPE E +
Sbjct: 1744 PCTPVDGVSKVVTVDVKGSTPLWMKIKDLADGVTYNFRIRA-KTLTYGPEVEANITTGPG 1802
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I +T + S PI Y + D+ + IP
Sbjct: 1803 EGAPGPPGEPFISRYG---AALTLHWTSGDQGRAPITRYVIEARPSDEGLWDILIKDIPK 1859
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
TL+ D+ L G Y RV+A ++ G G S+P+ + + F
Sbjct: 1860 EVTSYTLNLDM--LREGLTYDFRVIAVNDYGYGTPSAPSPSISAQKVSPF 1907
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P VW KD I R ++ G+L I+ + DD+G++ C A N+
Sbjct: 307 VDIPCQARGTPQPDIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNL 366
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P + ++ L C T A W G R+
Sbjct: 367 AGEIQTNTYLAVTSIAPNITAGPADSAVIDGTSVILHC--ETSGAPRPAITW-QKGERV- 422
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVG 166
+ ++ P ++ G L I+ + +DAG Y C+ ++ G
Sbjct: 423 -LASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRG 463
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 24/155 (15%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I S R I + L+I D+G Y A N + + +V
Sbjct: 122 PRPQITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPVV 181
Query: 78 LH-----GPSYYEQLPPKITIAAH-------RNLQ-LRCSAHTEELLDVAYIWTHNGVRI 124
L GP+ + + P I I+ RN + C A+ L+ ++ W +GV +
Sbjct: 182 LTVENVGGPA--DPIAPSIIISPKNTSVTMGRNEAIMECVANARPLVKMSITWRKDGVMV 239
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I G L I+ +D+G YEC
Sbjct: 240 NT---------GIRDFGRRLVISLPMVSDSGYYEC 265
>gi|148707723|gb|EDL39670.1| neurofascin, isoform CRA_b [Mus musculus]
Length = 972
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 205/442 (46%), Gaps = 51/442 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 519 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 576
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 577 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 635
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 636 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 686
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 687 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 740
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + R+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 741 -VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 798
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 799 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 851
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED P+ AP V R NSTAI++
Sbjct: 852 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRVLNSTAISL 911
Query: 410 TWNPIELIRENIRGRLIGHRIK 431
WN + + ++G+L +R++
Sbjct: 912 QWN--RVYSDTVQGQLREYRVR 931
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 208/568 (36%), Gaps = 92/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 418 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 475
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 476 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 526
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 527 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 581
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 582 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 631
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 632 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 684
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 685 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQF---EE 734
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 735 DQFQPGVWHDHSRFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 791
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 792 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 843
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 844 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTEVKIRV 903
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+N T + + W V + + Y+VR
Sbjct: 904 LNSTAISLQWNRVYSDTVQGQLREYRVR 931
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 12/182 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCT 61
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C
Sbjct: 327 RGMDLLLECIASGVPTPDIAWYKKGGDLPSN--KAKFENFNKALRITNVSEEDSGEYFCL 384
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 385 ASNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNG 441
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 442 EPLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPP 497
Query: 181 GL 182
+
Sbjct: 498 RM 499
>gi|432092481|gb|ELK25096.1| Contactin-4 [Myotis davidii]
Length = 1118
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 141/274 (51%), Gaps = 7/274 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+V I C P+A+PKP + WKK ++ R I E+G+L I V++ D+G Y+C ATN
Sbjct: 393 GGDVVIECKPKASPKPIYTWKKGRAVLRESERITISEDGSLRIVNVTKADAGSYTCVATN 452
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG RI
Sbjct: 453 HFGTASSTGSLVV-KDPTRVTVPPASMDVTVGESIVLTCQVRQDHSLDIVFTWSFNGHRI 511
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
N D + E G L I N AG+Y C V+++V ++S +IV GPPG P
Sbjct: 512 DFNRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCTVQTSVDQLSAAADLIVRGPPGPP 571
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W+ G N P+T Y + ART ++ W VS D GR
Sbjct: 572 EAVTIDEITDTTAQLSWSPGPDNHSPVTLYVVQARTPFSVGWQAVS-----TVPDVIDGR 626
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ L PW YEF+ +A N +G GEPS PS
Sbjct: 627 TFTATVVGLNPWVEYEFRTVAANAIGIGEPSPPS 660
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 155/373 (41%), Gaps = 50/373 (13%)
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
D P P+ + GGGG +L I+WE +P E QN Y + +R + T T+
Sbjct: 752 DVPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR-PHGTVIWMLTVLASA 810
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED---------------- 388
+ V R S ++ +EV+V N+ G GP S + ++SAE+
Sbjct: 811 DACRYVFRNESVRPFSPFEVRVGVYNNKGEGPFSPITVVYSAEEGLCSHGFLAPCPPTRV 870
Query: 389 ------------------MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI 430
P P + +R ++T + V W E RGR+ G+ +
Sbjct: 871 WKPVPMQLMGNTSSHLLAEPTRPPASISARSLSATDVEVVWASPP---ERNRGRIQGYEV 927
Query: 431 KYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
KYW+ D+ EE A + + I LQ Y++ V AYN AG GP S T +
Sbjct: 928 KYWRHDDKEENARKIRTFGNQTSTKITNLQGSALYHLAVKAYNTAGTGPSSATVNVTTRK 987
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV 550
P + P V + + + + + W V E + GYK +V SR + T +
Sbjct: 988 PPPSQAPGNV-VWNSSDSKIVLNWDQVKALENESDVRGYK----QVLYRWSRQSRTSVIE 1042
Query: 551 GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAIT--FQMGEEKEFKSGSPAL 604
N ++ L G+ Y + + S+GGDG S P +T + G + +
Sbjct: 1043 TNQTSVEL-SLPLGEDYIIEIRPVSDGGDGSASQQIRIPKMTNAYARGGGAGPSTSNACT 1101
Query: 605 YSASTTLLLVMSS 617
SA +TL+L +++
Sbjct: 1102 LSALSTLMLSLTA 1114
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+GG + C P P VW++ DG I RR +G L I ++D+G+Y C
Sbjct: 209 AKGGTARLECFALGNPVPTIVWRRADGKPIARKARRH-QSDGILEIPNFQQEDAGLYECV 267
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A ++ C A Y W NG
Sbjct: 268 AENSRGKNVARGQLTFYAQPNWIQKIS-DIQVAIEDSVSWECRASGRP--RPTYRWLKNG 324
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D ++I+ G L IT S ADAG Y+CV ++ G + S + +VI GP
Sbjct: 325 EPLFAQD-------RVHIEQGSLNITGVSLADAGMYQCVAENRHGAVFSSAELSVIAAGP 377
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 49/244 (20%)
Query: 381 VTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPE 439
+T+ +D+P+V P V G + + + +TW E + E ++ GR G+ + + P
Sbjct: 745 LTLPHGQDVPEVTPANVSGGGGSKSELVITW---ETVPEELQNGRGFGYVVAF----RPH 797
Query: 440 ETAVYYLSRTTRNWALIV-----GLQPDTKYYVKVMAYNNAGEGP--------ESERYL- 485
T ++ L+ A ++P + + V+V YNN GEGP +E L
Sbjct: 798 GTVIWMLTVLASADACRYVFRNESVRPFSPFEVRVGVYNNKGEGPFSPITVVYSAEEGLC 857
Query: 486 ----------ERTYRKAPQ---------------KPPSAVHIKGINPTTVHVTWRYVSPS 520
R ++ P +PP+++ + ++ T V V W P
Sbjct: 858 SHGFLAPCPPTRVWKPVPMQLMGNTSSHLLAEPTRPPASISARSLSATDVEVVWAS-PPE 916
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
I GY+V+ W D A I GN I +L YH+ V A++ G G
Sbjct: 917 RNRGRIQGYEVKYWRHDDKEENARK-IRTFGNQTSTKITNLQGSALYHLAVKAYNTAGTG 975
Query: 581 RMSS 584
S+
Sbjct: 976 PSSA 979
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 86/224 (38%), Gaps = 24/224 (10%)
Query: 4 EGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCT 61
+G + + C P A + + + W + RR + E GNL I+ V + D G Y+C
Sbjct: 107 QGQGMVLLCGPPAHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCV 166
Query: 62 ATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
TN + G L + P Q P + A +L C A +
Sbjct: 167 VTNTVTNHKVLGPPTPLTLRNDGVMGEYEPKIEVQFPDTVPTAKGGTARLECFALGNPVP 226
Query: 112 DVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ +W +G I + G+LEI N DAG YECV +++ GK
Sbjct: 227 TI--VWRRADGKPIARKARR-------HQSDGILEIPNFQQEDAGLYECVAENSRGKNVA 277
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYK 214
+ + P + ++V ++ W A+ GRP Y+
Sbjct: 278 RGQLTFYAQPNWIQKISDIQV-AIEDSVSWECRAS-GRPRPTYR 319
>gi|41281630|ref|NP_571458.1| neural cell adhesion molecule L1.1 precursor [Danio rerio]
gi|36142988|gb|AAQ85079.1| neural adhesion molecule L1.1 [Danio rerio]
Length = 1269
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 261/614 (42%), Gaps = 69/614 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C +P PK W+ +I S + NG+L IS VS +DS Y+C
Sbjct: 443 ATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGSLKISNVSEEDSNRYTC 502
Query: 61 TATNVHGMDESKGRLIVLH-----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
+ + + L VL+ GP P + + + L C + L
Sbjct: 503 SVSETN--KSISAELEVLNRTKIVGP------PQNLHVIRGSDAILHCKYTVDHNLKSPT 554
Query: 116 I-WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ W +G +I N +E+E G L++ + D G Y C V +T+ +
Sbjct: 555 VQWKKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGIYSCGVSTTLDSDTA 606
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P P +++ E + S TI W N P+T Y I N E
Sbjct: 607 SGYITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI---------EMNEGE 657
Query: 231 HVIGKEVDRYTGRKE--ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ +Y + +E L P+S Y F++ A N +G PS S Y+TPA KP
Sbjct: 658 TPDEGQWQKYRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSAPSESSLSYSTPAAKPD 717
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-SETLKEYGNVG 347
+ P + + ISW+ + R + N P YK+FWR+ D+ +E+ +V
Sbjct: 718 RNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSGAHWTES-----SVS 772
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + +E+KVQA+ND+G PE V +S ED P AP + T++
Sbjct: 773 NPPLLVNNTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTELQKTSV 832
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI----------- 456
V W+P+ E++RG L+G++I Y + P S N +I
Sbjct: 833 MVRWSPVR--PESVRGHLLGYKI-YLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIV 889
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
LQ + Y + + A+N+ GEGP SE E ++ P + + +P+ +T R+
Sbjct: 890 SDLQYYSDYTLTITAFNSKGEGPHSE---ESSFSTPEGAPGPVLFLPFDSPSESEITLRW 946
Query: 517 VSPSFEEEPIIGYKVRVWEV---DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+P I GY ++ EV + +P + + +L+P RY + A
Sbjct: 947 EAPHKPNGEIRGYLLQYQEVVIGSESPQHVESIDLPA--VTEFTLKNLNPESRYTFHLSA 1004
Query: 574 FSNGGDGRMSSPAI 587
++ GDG +PAI
Sbjct: 1005 RNSAGDG---APAI 1015
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C PE P P+ W + + + +K++ N L I V D G Y CTA N
Sbjct: 262 GQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+ + V P Y+ + P + A ++L C A ++ W+ NGV +
Sbjct: 322 SENSVKHHYTVTVEAAP-YWTRRPEEHLYAPGETVRLDCQADGIPAPNIT--WSINGVPV 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
D++ P + G L ++N F+D Y+C + G I T V +VE LP
Sbjct: 379 SGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVE----LP 430
Query: 184 GGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 216
+ + AT T D T G P+ H++I+
Sbjct: 431 AQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 468
>gi|432869236|ref|XP_004071687.1| PREDICTED: protein sidekick-2-like [Oryzias latipes]
Length = 2301
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 147/601 (24%), Positives = 259/601 (43%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 522 DGMSVILHCETAGAPRPAITWQKGERVLASGSVQQPRFTLLESGSLLISPSHLSDAGTYT 581
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + + P ++ + C + + V ++W
Sbjct: 582 CMASNSRGIDEASADLVVW-ARTRITKPPQDQSVIKGTKAVMTCGVTHDPSVTVRHVWEK 640
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I D+N +P + +D G L I+ D G Y C V S G S + V
Sbjct: 641 SGSVI---DVNT--SPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 695
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTN---WNSTWFNVSEHVI 233
P P V + K + + W P+ HY + N W N+
Sbjct: 696 LPHAPENPIAVLSTIEKRAINLTWAQAFDGNSPLIHYILEVSENNAPWTVLLANIEPEST 755
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V + L+P +Y+F++ A N++G G+ S + + P + P P
Sbjct: 756 GVTV------------SGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 803
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN P Y I + D + ++ T + N+ +
Sbjct: 804 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQIKNITNPDQTNLLLED 863
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST + T
Sbjct: 864 LII-----WTNYEIEVGAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVKAEAVNSTTVRFT 918
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
W+ + I G G+++ W+ E V + + + + I GL+ T+Y+
Sbjct: 919 WSAPS--PQFINGINQGYKLLAWEPGRSNEVTVVTVRPNFQDSVHVGHISGLKKYTEYFT 976
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S RT+ P + I T++ V+W+ P + +
Sbjct: 977 SVLCFTTPGDGPRSPPQRLRTHEDTPGA-VGHLSFTDILDTSLKVSWK--EPQEKNGILT 1033
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
G+++ E ++ +R + V T + + L+ Y ++V A ++ G G++S+ I
Sbjct: 1034 GFRISWEEFNRTNTRVTHYLPNV--TQEYKVTGLTALTTYTIQVAAMTSKGQGQLSASTI 1091
Query: 588 T 588
+
Sbjct: 1092 S 1092
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 177/414 (42%), Gaps = 52/414 (12%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV + W G+ PI +Y + + NW +VS VDR
Sbjct: 1519 EVQARQVLLSWEPGSDGLSPIRYYTVQYKELPDGNWTVHSASVSHESHSYMVDR------ 1572
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+F+V A N++G E S S T D P +AP+ + +
Sbjct: 1573 ------LKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTVLSVTPHTTTSVL 1626
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA--------VVRIPSEF 357
+ W+ E N + +++ +R+ + +S +++ + +R SE
Sbjct: 1627 MRWQLPSEEHINGVLLGFRVRYRELHYDRLRSFSVRTVNSPAANWADLSAPYSIRNLSES 1686
Query: 358 YYTEYE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
T+YE +++ N VG GP S +F E +P PQ V + +T
Sbjct: 1687 TLTQYELDNLSKHKRYEIRLSVYNAVGEGPSSAPQEVFVGEAVPTAPPQNVVVQSSTATQ 1746
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDT 463
++VTW+P L +N G + G++I +W+ ++ E +L + G T
Sbjct: 1747 LDVTWDPPPLDAQN--GDIQGYKIYFWEFQLQNETERLRTLFLPELGVKLKNLTGY---T 1801
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y + V A+N AG+GP S RT + AP PS +H + T+V+V+W P
Sbjct: 1802 TYMISVAAFNAAGDGPRSLPTRGRTQQAAPSA-PSYIHFSELTTTSVNVSWG--EPKQAN 1858
Query: 524 EPIIGYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
I GY++ V+E VD +S+ + + L I DL+ G Y+ R+ A
Sbjct: 1859 GIIEGYRL-VYEPCTPVD-GVSKIVTVDVKGSSPLWMKIKDLADGVTYNFRIRA 1910
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 184/433 (42%), Gaps = 43/433 (9%)
Query: 166 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
G++S T I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 1084 GQLSAST--ISSGVPPELPGPPTNLGISNIGPRSITLQFKPGYDGKTSISRWLVEAQIGI 1141
Query: 222 ---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
N W V+ + V+ R ++ L P++ Y F++ N +G PS PS
Sbjct: 1142 IGENEEWL-----VVHQLVNEPDARSLEVLD--LNPYTFYRFRMRQVNIVGSSLPSQPSR 1194
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQ 336
+ T P +P+ + L + W PLP + N ++ Y+I + K
Sbjct: 1195 KIQTLQAPPDISPANVTLRTASETSLWLRWVPLPEWEYNGNPDHVGYRIQYCKAGSK--- 1251
Query: 337 SETLKEYGNVGIAVV--RIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAED 388
G V V+ R+ EF +TEYEV+VQA+N +G GP S+ V + E
Sbjct: 1252 -------GGVLFHVIMDRLEREFTIEDLEEWTEYEVRVQAVNGIGSGPWSQAVHGRTRES 1304
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P P V + S++I V W + N G ++G+++ Y ++D+ + + +
Sbjct: 1305 VPSSGPTNVSAFATTSSSILVRWGEVPAADRN--GLILGYKVVYKEKDSDSAPSFWAVEG 1362
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES-ERYLERTYRKAPQKPPSAVHIKGINP 507
T + + L Y ++V+A+ G+G S LERT P PP + +
Sbjct: 1363 NTSHSVQLTSLGKYILYEIQVLAFTRIGDGKTSLPPILERTLDDVP-GPPVGILFPEVRT 1421
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567
+V + W+ P+ I+ Y++ ++ + S A + +T L P Y
Sbjct: 1422 NSVRLIWQ--PPAQPNGIILAYQI-IFRRNSSNSNAATVDVLSPSTRQYTATGLKPEMVY 1478
Query: 568 HMRVLAFSNGGDG 580
R+ A + G G
Sbjct: 1479 VFRLTAQTRKGWG 1491
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P+ VW KD I R ++ G+L I+ + DD+G++ C A N+
Sbjct: 433 VDIPCQARGTPQPEIVWYKDAVPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQCFARNL 492
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P + ++ L C T A W G R+
Sbjct: 493 AGEIQTNTYLAVTSIAPNITAGPSDSAVIDGMSVILHC--ETAGAPRPAITW-QKGERV- 548
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ + +DAG Y C+ ++ G ++V
Sbjct: 549 -LASGSVQQPRFTLLESGSLLISPSHLSDAGTYTCMASNSRGIDEASADLVV 599
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 129/333 (38%), Gaps = 28/333 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G S+P + A P P + L ++W+P P + QN
Sbjct: 1702 YEIRLSVYNAVGEGPSSAPQEVFVGEA-VPTAPPQNVVVQSSTATQLDVTWDPPPLDAQN 1760
Query: 318 APNIYYKI-FW--RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW + +N+TE ++ L E G V++ + YT Y + V A N G
Sbjct: 1761 GDIQGYKIYFWEFQLQNETERLRTLFLPELG------VKLKNLTGYTTYMISVAAFNAAG 1814
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP + +T++NV+W + G + G+R+ Y
Sbjct: 1815 DGPRSLPTRGRTQQAAPS-APSYIHFSELTTTSVNVSWGE----PKQANGIIEGYRLVYE 1869
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + ++ W I L Y ++ A GPE E +
Sbjct: 1870 PCTPVDGVSKIVTVDVKGSSPLWMKIKDLADGVTYNFRIRA-KTLTYGPEVEANITTGPG 1928
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I +T + S PI Y + D+ + IP
Sbjct: 1929 EGAPGPPGEPFISRYG---AALTLHWTSGDQGRAPITRYVIEARPSDEGLWDILIKDIPK 1985
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
TL+ D+ L G Y RV+A ++ G G
Sbjct: 1986 EVTSYTLNLDM--LREGVTYDFRVIAVNDYGYG 2016
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 197 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256
T+ WT G PIT Y I AR + W ++ I KEV YT + E V
Sbjct: 1948 TLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDMLREGV----- 2001
Query: 257 TYEFKVIAGNELGYGEPS 274
TY+F+VIA N+ GYG PS
Sbjct: 2002 TYDFRVIAVNDYGYGSPS 2019
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
PKP+ W +DG I S R I + L+I D+G Y A N + + I
Sbjct: 248 PKPQITWFRDGRKIPSSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPIT 307
Query: 78 LH-----GPS-----YYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ P ++ RN + C A+ L+ ++ W +GV +
Sbjct: 308 LTVENVGGPADPIAPSIIIPPKNTSVTVGRNEAIMECVANARPLVKMSITWRKDGVAVST 367
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
I G L I+ + D+G YEC
Sbjct: 368 ---------GIRDFGRRLVISLPAVRDSGYYEC 391
>gi|317419599|emb|CBN81636.1| Protein sidekick-2 [Dicentrarchus labrax]
Length = 2147
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 258/599 (43%), Gaps = 42/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 367 DGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYT 426
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + P ++ + C + + V ++W
Sbjct: 427 CMASNSRGIDEASADLVVW-ARTRITTPPQDQSVIKGTKAIMTCGVTHDPSVTVRHVWEK 485
Query: 120 NGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I N P + +D G L I+ D G Y C V S G S + V
Sbjct: 486 EGSVI-----NVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 540
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + K + + W P+ Y + N N+ W + ++ +
Sbjct: 541 LPHAPENPTAMLSTSEKRAIDLAWAKPFDGNSPLIRYILEVSEN-NAPWAILLANIEPES 599
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
A N L+P +Y+F++ A N++G G+ S + + + P + P AP +
Sbjct: 600 T--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAAPQNVIA 651
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P P QN Y + +R ++Q +K + + + +
Sbjct: 652 SGRTNQSIMIQWQPPPESHQNGILRGYTVRYRLTGLPVDYQ---IKNISSPDVTNLLLED 708
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW---N 412
+T YE++V A N G G S VT ++ + +P +AP V + NST I TW N
Sbjct: 709 LIIWTNYEIEVAAYNGAGLGTFSHKVTEWTLQGVPTIAPGNVQAESVNSTTIRFTWTAPN 768
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKV 469
P + I G G+++ W+ EE ++ + + + + ++GL+ T+YY V
Sbjct: 769 P-----QFINGINQGYKLLAWEPGRDEEVSMVTVRPNFQDSVHVGYVMGLKKFTEYYTSV 823
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ + G+GP S RT+ P + I T++ V+W P + + GY
Sbjct: 824 LCFTTPGDGPRSPPKALRTHEDTPGA-VGHLSFTEILDTSLKVSWS--EPGEKNGVLTGY 880
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
++ E ++ +R + V TL+ + L+ Y + V ++ G G++SS I+
Sbjct: 881 RISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAGMTSKGQGQLSSSTIS 937
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 171/405 (42%), Gaps = 35/405 (8%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V + W G+ P+ +Y + R S W V + E Y I
Sbjct: 1364 DVQARQVLLLWEPGSDGLSPVRYYTVQHRELPESNW-TVHSASVNHEATSY-------IV 1415
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + I W+
Sbjct: 1416 SRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDEAPTILSVTPHTTTSVLIRWQ 1475
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSET------------------LKEYGNVGIAVV 351
P EK N + ++I +R+ +S + ++ + +
Sbjct: 1476 PPSEEKINGILLGFRIRYRELLYDRLRSYSVHTINSASTWAELNAPYSIRNLSDSTLIQY 1535
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ + YE+++ N VG GP S +F E +P PQ V + +T ++VTW
Sbjct: 1536 ELDKLSKHKRYEIRMSVYNAVGEGPASSPQEVFVGEAVPTAPPQNVAIQSATATQLDVTW 1595
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+P + +N G + G+++ +W+ ET + L T Y + V
Sbjct: 1596 DPPPVDAQN--GDIQGYKVYFWEFQRKNETERLRTLFMPEGGVKLKNLTGYTTYMISVAP 1653
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N AG+GP S RT + AP PS +H + T+V+V+W P+F I GY++
Sbjct: 1654 FNAAGDGPRSPPTRGRTQQAAPSA-PSFIHFSELTTTSVNVSWG--EPTFPNGIIEGYRL 1710
Query: 532 RVWEVDQDMSRANDTI---IPVGNTLDADIVDLSPGKRYHMRVLA 573
V+E + + T+ + L + DL+ G Y+ R+ A
Sbjct: 1711 -VYEPCTPVDGVSKTVTVDVKGSGPLWLKLRDLADGITYNFRIRA 1754
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 169/437 (38%), Gaps = 55/437 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVD 238
PG P G+ EV TS + W + I Y+I + NST N + V+
Sbjct: 1253 PGPPVGILFPEVRTTSVRLIWQSPSQPNGIILAYQITY--HLNSTNSNTATVDVLNPSAR 1310
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGG 296
+YT L P S Y F++ A G+GE + +P Q SR +
Sbjct: 1311 QYT-------VTSLKPESVYVFRITAQTRKGWGEAAEALVVTTEKRARP-QPTSRPMVPQ 1362
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIP 354
+ + + WEP +P YY + R+ ++ + S ++ I P
Sbjct: 1363 EDVQARQVLLLWEP--GSDGLSPVRYYTVQHRELPESNWTVHSASVNHEATSYIVSRLKP 1420
Query: 355 SEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+T Y+ +V+A ND+G ESE +T +D P AP + +T++ + W
Sbjct: 1421 ----FTSYQFRVKATNDIGDSEYSEESEAITTL--QDAPDEAPTILSVTPHTTTSVLIRW 1474
Query: 412 NPIELIRENIRGRLIGHRIKY---------------------WKEDNPEETAVYYLSRTT 450
P E I G L+G RI+Y W E N ++ LS +T
Sbjct: 1475 QPPS--EEKINGILLGFRIRYRELLYDRLRSYSVHTINSASTWAELN-APYSIRNLSDST 1531
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ L +Y +++ YN GEGP S P PP V I+ T +
Sbjct: 1532 LIQYELDKLSKHKRYEIRMSVYNAVGEGPASSPQEVFVGEAVPTAPPQNVAIQSATATQL 1591
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
VTW + I GYKV WE + + R +P G + +L+ Y
Sbjct: 1592 DVTWDPPPVDAQNGDIQGYKVYFWEFQRKNETERLRTLFMPEGG---VKLKNLTGYTTYM 1648
Query: 569 MRVLAFSNGGDGRMSSP 585
+ V F+ GDG S P
Sbjct: 1649 ISVAPFNAAGDGPRSPP 1665
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 171/425 (40%), Gaps = 38/425 (8%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W++ +T Y+I + +N T V+ ++
Sbjct: 844 EDTPGAVGHLSFTEILDTSLKVSWSEPGEKNGVLTGYRI-SWEEYNRTNTRVTHYLPNVT 902
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP----YQAP 291
++ R TG L +TY +V G G+ SS + P + P A
Sbjct: 903 LEYRVTG---------LTALTTYTIEVAGMTSKGQGQLSSSTISSGVPPELPGPPTNMAI 953
Query: 292 SRIGGGG-------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
S IG G G SIS W+ + N + + N+ E +S
Sbjct: 954 SNIGPRSVTLQFKPGYDGKTSISRWQVEAQVGVVGENEDWVTVHQVSNEPEARS------ 1007
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGF 402
+ +P YT Y +++ +N VG P S+ I + P +AP V R
Sbjct: 1008 -------LEVPGLNPYTFYRFRMRQVNIVGISPPSQPSRKIQTLPAPPDMAPANVTLRTA 1060
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ T++ + W P+ N +G+R++Y + + ++ ++ I L+
Sbjct: 1061 SETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGSQGRALIHIIADRQEREFTIEDLEEW 1120
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y V+V A N G GP S+ RT P P+ V +++ V W V
Sbjct: 1121 TEYEVRVQAVNGIGMGPWSQPVRGRTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDR 1180
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
I+GYKV E D D S + + T + L Y ++VLAF+ GDGR
Sbjct: 1181 NGLILGYKVVYKEKDSD-STVHFWTVEGNATHSVQLTGLGKYVLYEIQVLAFTRIGDGRP 1239
Query: 583 SSPAI 587
SSP I
Sbjct: 1240 SSPPI 1244
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 157/368 (42%), Gaps = 32/368 (8%)
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
H+I +R E +IE+ L W+ YE +V A N +G G S P + T P
Sbjct: 1102 HIIADRQER-----EFTIED-LEEWTEYEVRVQAVNGIGMGPWSQPV-RGRTRESVPSCG 1154
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K+ D+ T++ GN
Sbjct: 1155 PTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVVYKEKDSDSTVHFWTVE--GN-ATH 1211
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
V++ Y YE++V A +G G P S + + +D+P P G+ +T++
Sbjct: 1212 SVQLTGLGKYVLYEIQVLAFTRIGDGRPSSPPILERTLDDVPG-PPVGILFPEVRTTSVR 1270
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA-VYYLSRTTRNWALIVGLQPDTKYYV 467
+ W G ++ ++I Y TA V L+ + R + + L+P++ Y
Sbjct: 1271 LIWQS----PSQPNGIILAYQITYHLNSTNSNTATVDVLNPSARQYT-VTSLKPESVYVF 1325
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEP 525
++ A G G +E + T ++A +P S V + + V + W S P
Sbjct: 1326 RITAQTRKGWGEAAEALVVTTEKRARPQPTSRPMVPQEDVQARQVLLLWEPGSDGL--SP 1383
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD---IVDLSPGKRYHMRVLAFSNGGDGRM 582
+ Y V+ +++ +N T+ +A + L P Y RV A ++ GD
Sbjct: 1384 VRYYTVQ----HRELPESNWTVHSASVNHEATSYIVSRLKPFTSYQFRVKATNDIGDSEY 1439
Query: 583 S--SPAIT 588
S S AIT
Sbjct: 1440 SEESEAIT 1447
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 99/269 (36%), Gaps = 39/269 (14%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I + L+I D+G Y A N + + I
Sbjct: 93 PQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPIT 152
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 124
L GP+ I + + + C A+ L+ ++ W NGV +
Sbjct: 153 LSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVTS 212
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L I + +DAG YEC + S+V +S + V PP
Sbjct: 213 GLSDFNR-----------RLTILSPVVSDAGYYECEAILRSSSVPSVSAGAYLHVLEPPQ 261
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
++ E H T+ + D R + I+ W+ + + + RY
Sbjct: 262 F---IKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDALPIDPVKTPRYR 310
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELG 269
S++ N L+P T F+ A N G
Sbjct: 311 VLVGGSLQVNGLLPDDTGMFQCFARNRAG 339
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA--- 62
VT+ C A P K W+K+G ++ SG F ++SPV D+G Y C A
Sbjct: 185 VTMECVANARPLIKLSISWRKNGVLVTSG--LSDFNRRLTILSPVV-SDAGYYECEAILR 241
Query: 63 -TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
++V + + L VL P + ++ IT + + + C A D+ +W +
Sbjct: 242 SSSVPSVS-AGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDI--VWYKDA 298
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ ++TP + GG L++ D G ++C ++ G++ T T + V
Sbjct: 299 -----LPIDPVKTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNRAGEVQTNTYLAV 349
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 137/357 (38%), Gaps = 37/357 (10%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V+A +G G PSSP T D P P I + + + W+ + N
Sbjct: 1224 YEIQVLAFTRIGDGRPSSPPILERTLDDVP-GPPVGILFPEVRTTSVRLIWQ--SPSQPN 1280
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPG 375
+ Y+I + N T + T+ V + E Y + + Q G
Sbjct: 1281 GIILAYQITYH-LNSTNSNTATVDVLNPSARQYTVTSLKPESVYV-FRITAQTRKGWGEA 1338
Query: 376 PESEVVTIFS-AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK 434
E+ VVT A P P V + + + W P +R + HR
Sbjct: 1339 AEALVVTTEKRARPQPTSRPM-VPQEDVQARQVLLLWEPGSDGLSPVRYYTVQHR----- 1392
Query: 435 EDNPEET-AVYYLSRTTRNWALIVG-LQPDTKYYVKVMAYNNAGEGPESERYLE-RTYRK 491
+ PE V+ S + IV L+P T Y +V A N+ G+ SE T +
Sbjct: 1393 -ELPESNWTVHSASVNHEATSYIVSRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQD 1451
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN------- 544
AP + P+ + + T+V + W+ S ++G+++R E+ D R+
Sbjct: 1452 APDEAPTILSVTPHTTTSVLIRWQPPSEEKINGILLGFRIRYRELLYDRLRSYSVHTINS 1511
Query: 545 -------DTIIPVGNTLDADIVD-----LSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ + N D+ ++ LS KRY +R+ ++ G+G SSP F
Sbjct: 1512 ASTWAELNAPYSIRNLSDSTLIQYELDKLSKHKRYEIRMSVYNAVGEGPASSPQEVF 1568
>gi|282554945|gb|ADA82573.1| hypothetical protein [Ailuropoda melanoleuca]
Length = 348
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 171/348 (49%), Gaps = 14/348 (4%)
Query: 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLL 144
P K+ + ++ L C + ++V +IW+ NG I DL + I G G L
Sbjct: 10 PSKMDVTVGESIVLPCQVSHDPSIEVVFIWSFNGDVI---DLKKGVAHFERIGGESVGDL 66
Query: 145 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA 204
I N +G+Y C VK+T+ +S +IV GPPG P V+V + T++ + W G+
Sbjct: 67 MIRNIQLNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGS 126
Query: 205 TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 264
N PI + I ART ++ W VS + +G+ + L PW YEF+V+A
Sbjct: 127 DNNSPIQIFTIQARTPFSVGWQAVS-----TVPEILSGKTYNATVVGLSPWVEYEFRVVA 181
Query: 265 GNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK 324
GN +G GEPS S T A P AP+ I GGGG +L I+WE +P E QN Y
Sbjct: 182 GNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYI 241
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
I R T + E + + V R S + +EVKV N+ G G S + ++
Sbjct: 242 IMLRPVGSTAWTKERVPSVESSRF-VYRNESITPLSPFEVKVGVYNNEGEGSLSTMSIVY 300
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY 432
S ED PQ AP+G + F+++ + V+W I R GR++G+ + +
Sbjct: 301 SGEDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNT--GRVLGYEVIH 346
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWN--PIE 415
+ EYE +V A N +G G S+ + + +P VAP + G + + + +TW P E
Sbjct: 172 WVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEE 231
Query: 416 LIRENIRGRLIGHR----IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
L G +I R + KE P + ++ R + P + + VKV
Sbjct: 232 LQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRFVYRNE-------SITPLSPFEVKVGV 284
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YNN GEG S + + PQ+ P ++ + + + V+W+ ++ + ++GY+V
Sbjct: 285 YNNEGEGSLSTMSIVYSGEDEPQQAPRGTSVQSFSASEMEVSWKAIAWNRNTGRVLGYEV 344
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 16/215 (7%)
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P P+ V +ST ++W P I+ I R + T LS
Sbjct: 101 PPGPPEDVRVEHISSTTSQLSWRPGSDNNSPIQIFTIQARTPFSVGWQAVSTVPEILSGK 160
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPT 508
T N A +VGL P +Y +V+A N+ G G P L RT P P+ ++ G + +
Sbjct: 161 TYN-ATVVGLSPWVEYEFRVVAGNSIGIGEPSKASELLRTKASVPVVAPTNINGGGGSRS 219
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRV-------WEVDQDMSRANDTIIPVGNTLDADIVDL 561
+ +TW + + GY + + W ++ S + + + I L
Sbjct: 220 ELVITWESIPEELQNGEEFGYIIMLRPVGSTAWTKERVPSVESSRFV----YRNESITPL 275
Query: 562 SPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
SP + ++V ++N G+G +S+ +I + +E +
Sbjct: 276 SP---FEVKVGVYNNEGEGSLSTMSIVYSGEDEPQ 307
>gi|326663834|ref|XP_683194.5| PREDICTED: protein sidekick-1 [Danio rerio]
Length = 2183
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 255/599 (42%), Gaps = 43/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G + C+ APKP VW+K ++ SG R + E+G L I P+ D+G Y+
Sbjct: 460 DGTSAVFTCDTSGAPKPAIVWRKGSQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYT 519
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+ + L VL ++ P + L C+A + + V Y W
Sbjct: 520 CLASNTEGLVNATVALTVLSR-TFISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSW-- 576
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G L+ +++ G L+I+ D G+Y C V S G S + V
Sbjct: 577 ---KKGTKPLSVSTGGRVSMKEGSLQISQTWSGDIGDYTCRVISPAGNDSKSARLEVIEL 633
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P +QV E + + W P+ HY II + NS W
Sbjct: 634 PHSPRNLQVALNETDSRTVLLSWVRPFDGNSPLLHY-IIEFSENNSPW------------ 680
Query: 238 DRYTGRKEASIENVLV----PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
Y ++ ++LV P TY+F+V A N++G G+ S+ + + + P P
Sbjct: 681 KVYMDDVSPTLASLLVIGLTPARTYQFRVCAVNQVGRGQYSAETNRLMLREEPPSAPPKN 740
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 352
I G + + W+P P + N Y + +R EFQ LK + I
Sbjct: 741 IVASGRTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGEFQ---LKNITSAEINYCL 797
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
I +T+YE++V A G G S+ T ++ + +P PQ V + NST I TW
Sbjct: 798 IGELIIWTQYEIQVAAYTGAGLGVYSQSATEYTLQGVPTAPPQDVEAVALNSTTIKFTWT 857
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKV 469
P ++ I G G+++ W E P+ + ++ +R++ + L+ T Y V
Sbjct: 858 PPP--QQFINGINQGYKLLVWPEHCPDCITMVTIAPEFHGSRHYGYVSNLRKFTWYETAV 915
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+ + G+GP S L +T+ P P + + I T++ ++W+ P + I GY
Sbjct: 916 LCFTTPGDGPASTSQLIQTHVDKP-GPVTQLSFTEILDTSLRISWQ--EPEDKNGIITGY 972
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E Q+ + + T+ +TL + L+ Y ++V A + G G +S I+
Sbjct: 973 VLSWQEAGQNETLVSQTL--SNSTLAYKVTGLTSLTTYALQVAAVTQAGVGASTSSTIS 1029
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 153/633 (24%), Positives = 242/633 (38%), Gaps = 100/633 (15%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLL-ISPVSRDDSGIYSCTAT 63
NV + C+ + P PK W KD + + R K+ + +L + + DD+GI+ C A
Sbjct: 369 NVELQCHAKGVPTPKLEWFKDAIPLSTLNNSRYKLTTSSMVLQVRRIQPDDAGIFQCFAE 428
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ L++ + P IT+ + C T A +W R
Sbjct: 429 NTAGEIQAHTNLVITSMSPLFTTPPSDITVTDGTSAVFTCD--TSGAPKPAIVW-----R 481
Query: 124 IGNMDL--NELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---- 176
G+ L ++TP + + G L+I +DAG Y C+ +T G ++ + V
Sbjct: 482 KGSQVLASGSVQTPRFTLLESGGLQILPIMPSDAGNYTCLASNTEGLVNATVALTVLSRT 541
Query: 177 --EGPP-------GLPGGVQVVEVHKTSATIQ--WTDGATNGRPITHYKIIARTNWNSTW 225
PP G + H T++ W G +P++ R +
Sbjct: 542 FISTPPEDQRVIKGTTAVLHCAATHDPRVTVRYSWKKGT---KPLS-VSTGGRVSMKEGS 597
Query: 226 FNVSEHVIGKEVDRYTGR---------KEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
+S+ G ++ YT R K A +E + +P S +V A NE
Sbjct: 598 LQISQTWSG-DIGDYTCRVISPAGNDSKSARLEVIELPHSPRNLQV-ALNETD------- 648
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKND--- 332
SR + +SW P N+P ++Y I + + N
Sbjct: 649 ---------------SRT---------VLLSWVRPF---DGNSPLLHYIIEFSENNSPWK 681
Query: 333 --TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDM 389
+ S TL +G+ R Y+ +V A+N VG G S E + E+
Sbjct: 682 VYMDDVSPTLASLLVIGLTPART--------YQFRVCAVNQVGRGQYSAETNRLMLREEP 733
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P P+ + + G + +I V W P + G L G+ ++Y P E + ++
Sbjct: 734 PSAPPKNIVASGRTNQSIMVQWQPPP--EPQLNGVLRGYVLRYRLAGLPGEFQLKNITSA 791
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
N+ LI L T+Y ++V AY AG G S+ E T + P PP V +N TT
Sbjct: 792 EINYCLIGELIIWTQYEIQVAAYTGAGLGVYSQSATEYTLQGVPTAPPQDVEAVALNSTT 851
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV--GNTLDADIVDLSPGKRY 567
+ TW F GYK+ VW TI P G+ + +L Y
Sbjct: 852 IKFTWTPPPQQFINGINQGYKLLVWPEHCPDCITMVTIAPEFHGSRHYGYVSNLRKFTWY 911
Query: 568 HMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSG 600
VL F+ GDG PA T Q+ + K G
Sbjct: 912 ETAVLCFTTPGDG----PASTSQLIQTHVDKPG 940
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 36/338 (10%)
Query: 198 IQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLV 253
+ W G P+ ++ + + +W + ++ + EVDR L
Sbjct: 1467 LHWMAGGDGSSPVRYFTLQTLELPDGDWKTHTSSIPHNNSSWEVDR------------LK 1514
Query: 254 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313
P+++Y+F+++A N++G S + T D P +AP + + + W+P
Sbjct: 1515 PYTSYKFRMMATNDVGDSAFSKETEPVTTLQDVPGEAPVILLVKPSTTTSVIVQWQPPAE 1574
Query: 314 EKQNAPNIYYKIFWRK------------KNDT----EFQSE-TLKEYGNVGIAVVRIPSE 356
N + Y++++R+ N + EF+++ T K + + +
Sbjct: 1575 GTVNGILVGYRVYYRELPSESNPKVVQSTNQSTISLEFRAKSTFKTVSSPSLTEFELTQL 1634
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
Y Y + + A N VG P S V +F E P VAPQ + + +S ++V W P +
Sbjct: 1635 SKYRRYAIVMTAFNVVGESPSSAPVEVFVGEAAPSVAPQNIQVKSVSSNQLDVEWQPPPV 1694
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+N G + G++I YW++D ET + + L T Y V++ A+N AG
Sbjct: 1695 ETQN--GNIQGYKIHYWEKDRQNETEKELVLFVPETCVHLKNLTSYTSYLVQLSAFNAAG 1752
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+GP S RT + AP PS V + ++++V+W
Sbjct: 1753 DGPLSTARKGRTLQAAPGS-PSRVVFSEVTGSSLNVSW 1789
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 175/411 (42%), Gaps = 17/411 (4%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG + E+ TS I W + IT Y + +W N E ++ + +
Sbjct: 939 PGPVTQLSFTEILDTSLRISWQEPEDKNGIITGYVL----SWQEAGQN--ETLVSQTLSN 992
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
T + + L +TY +V A + G G +S + P + P APS +
Sbjct: 993 STLAYKVT---GLTSLTTYALQVAAVTQAGVGASTSSTISTGLPPELP-GAPSNLVISNI 1048
Query: 300 KIGDLSISWEPLPREKQNAPN--IYYKIFWRKKNDTEFQSETLKEYGNVGIA-VVRIPSE 356
++I + P K + ++ + + E + + L E + + + IP+
Sbjct: 1049 SPRSVTIQFSPGSDGKTEISKWIVEGQVVIVGEEEKEAEWKVLYERDSPPASDTLEIPNL 1108
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T+Y +++ +N VG P SE + + + P VAP + + T++ + W P+
Sbjct: 1109 IPFTQYRFRMKQVNIVGSSPFSESSRLMQTLQSSPDVAPTELVVFSASETSLRIRWEPLP 1168
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
N +G+R++ + D + + +S + GL+ T Y + + A+N+
Sbjct: 1169 EAAYNGNPESVGYRVRAQRADGFGQPRMETVSDRLSCEVTVEGLEEWTDYELSIQAFNSI 1228
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GP S L +T P P V + ++ T+V VTW V + I+GYKV E
Sbjct: 1229 GPGPWSSHVLGKTKESVPSGAPENVSAEAMSSTSVLVTWGSVPEHQKNGHILGYKVLYRE 1288
Query: 536 VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSP 585
D D RA + GN ++ +LS Y ++VLAF+ GDG S P
Sbjct: 1289 KDSD--RAPQAHLVNGNQTHMLLLRNLSKFTVYEIQVLAFTRVGDGPPSLP 1337
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 18/352 (5%)
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
E ++E L W+ YE + A N +G G P S T P AP + +
Sbjct: 1206 EVTVEG-LEEWTDYELSIQAFNSIGPG-PWSSHVLGKTKESVPSGAPENVSAEAMSSTSV 1263
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
++W +P ++N + YK+ +R+K+ L + ++R S+F T YE+
Sbjct: 1264 LVTWGSVPEHQKNGHILGYKVLYREKDSDRAPQAHLVNGNQTHMLLLRNLSKF--TVYEI 1321
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
+V A VG GP S T +D P + +++ V W P G
Sbjct: 1322 QVLAFTRVGDGPPSLPPTAERTKDDVPGPPVRLMFPEVRLSSVRVVWQP----PSEPNGI 1377
Query: 425 LIGHRIKYWKE-DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
++G++I Y + ++P + + R + + GL P++ Y ++ A G GP E
Sbjct: 1378 IMGYQISYRLDINDPNKFTTVEVGSNARQFT-VTGLMPESAYVFQITARTLQGWGPADEA 1436
Query: 484 YLERT-YRKAPQKPPS-AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
+ T R+ PQ P V KG+ + + W ++ P+ + ++ E+
Sbjct: 1437 IVITTEKRERPQAPRRLTVPQKGVESYKLRLHW--MAGGDGSSPVRYFTLQTLELPDGDW 1494
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS---PAITFQ 590
+ + + IP N+ ++ L P Y R++A ++ GD S P T Q
Sbjct: 1495 KTHTSSIPHNNS-SWEVDRLKPYTSYKFRMMATNDVGDSAFSKETEPVTTLQ 1545
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
VEG PG P V + ++ T+ WT G+ P+T Y I AR + W +H+
Sbjct: 1866 VEGSPGSPLQTSVTK-SASALTLHWTKGSEGAGPVTGYVIEARPSDEGLWDTFVKHLPAG 1924
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ YT + V YEF+VI+ N GYG+PS PS + ++ P+
Sbjct: 1925 SLS-YTISLDRLRSGV-----AYEFRVISVNRFGYGDPSPPSTAMSALSETPF 1971
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 9 TIFC--NPEAAPKPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 62
T+ C N + + + WK++G + +G GRR L+IS + D G+Y C A
Sbjct: 278 TLECVANARSLDRLQVFWKRNGVRLTAGVDSFGRR-------LVISNPTSADGGLYVCEA 330
Query: 63 T---NVHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWT 118
T + E+K L VL P ++ P + IA +N++L+C H + + W
Sbjct: 331 TLRNSSQKSTEAKAYLSVLESP-HFTSKPKRYMIAEVEKNVELQC--HAKGVPTPKLEWF 387
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ + + ++ + + + +L++ DAG ++C ++T G+I T +++
Sbjct: 388 KDAIPLSTLNNSRYK---LTTSSMVLQVRRIQPDDAGIFQCFAENTAGEIQAHTNLVI 442
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 13 NPEAA---PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
NP A P+P+ W +DG I R I + L++ + D+G Y A N +
Sbjct: 177 NPPAVTSFPRPQVTWFRDGVKIIPNHRVAITLDNQLVVLSTAAADAGRYYVQAVNERNGE 236
Query: 70 ESKGRLIVLH-----GPSYYEQLPPKITIAAHRN--------LQLRCSAHTEELLDVAYI 116
I L P+ E + P I IA L C A+ L +
Sbjct: 237 NKTSPSIYLSIANVIAPA--ELVAPVIVIAPKNTSVVAGASEATLECVANARSLDRLQVF 294
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
W NGVR+ T ++ G L I+N + AD G Y C ++T+ S K+T
Sbjct: 295 WKRNGVRL---------TAGVDSFGRRLVISNPTSADGGLYVC--EATLRNSSQKST 340
>gi|344306192|ref|XP_003421772.1| PREDICTED: LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like
[Loxodonta africana]
Length = 1205
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 259/597 (43%), Gaps = 49/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + AP P W ++G + R + NG L I + +D+ Y C
Sbjct: 438 AVEGSTAYLLFKAFGAPVPSIQWLDEEGATVLQDERFFPYANGTLGIRDLQANDTARYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
ATN D++ ++ + + Q P + C A + L + W
Sbjct: 498 QATN----DQNNVTIVANLQVKDATRITQGPQSAIEKKGSRVTFTCQASFDPSLKHSITW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+G DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 RRDG-----RDLQELGDSDKYFIEDSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQLLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFNVSEH 231
G PG +++ + H + + W+ + PI Y I + W+++ +
Sbjct: 609 VGSPGPVPQLELSDRHLLKQCQVRLSWSPAEDHNAPIEKYDIEFEDKKMEPEKWYSLGK- 667
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
V G + S L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 668 VPGNQT---------STTLKLSPYIHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNP 718
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--NDTEFQSETLKEYGNVGIA 349
+ G G + ++ I+W+PL NAP + Y++ WR + +Q + L +
Sbjct: 719 VDVRGEGNETNNMVITWKPLKWMDWNAPQVQYRVQWRPQGVRGAAWQEQILSK----PFL 774
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
VV S F YE++VQA+N G GPE V +S ED PQ +PQ + NS+A+ V
Sbjct: 775 VVTNTSTF--VPYEIRVQAVNSQGKGPEPHVTIGYSGEDFPQASPQLDGVKILNSSAVLV 832
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++ + ++G L G+ + YW E + + + ++ R A++ GL+P +
Sbjct: 833 KWWPVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHVHRGHVVVPANTTSAILSGLRPYS 890
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE T P P A+H++ + T++ + W+ P
Sbjct: 891 SYHLEVQAFNGRGAGPASEITFS-TPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHN 946
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ +L P RY ++ A + G G
Sbjct: 947 GVLTGYVLSYHPLDEGSKEQLSFDLRNPELRMHNLTNLDPHLRYRFQLQATTKKGPG 1003
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 145/638 (22%), Positives = 238/638 (37%), Gaps = 70/638 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
G G + C + P+P+ W+ +G + + + + L++S V D+ +
Sbjct: 344 GPGETARLDCQVQGRPQPEVTWRINGIPLTELSEDQKYRTQQGDALILSNVQPSDTMVTQ 403
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N HG L++ + Y QLP KI + L T LL A+
Sbjct: 404 CEARNRHG-------LLLANAYIYVVQLPTKI-LTPDNQTYLAVEGSTAYLLFKAF---- 451
Query: 120 NGVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKT 172
G + ++ + E + D G L I + D Y C + ++
Sbjct: 452 -GAPVPSIQWLDEEGATVLQDERFFPYANGTLGIRDLQANDTARYFCQATNDQNNVTIVA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G Q + K + + +T A+ + H W ++ E
Sbjct: 511 NLQVKDATRITQGPQSA-IEKKGSRVTFTCQASFDPSLKH-----SITWRRDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y I L + +A +L E + +P P S
Sbjct: 563 LG-DSDKYFIEDSRLIIQSLDYSDQGNYSCVASTKLDVVESRAQLLVVGSPGPVPQLELS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVV 351
K + +SW P E NAP Y I F KK + E K GN +
Sbjct: 622 --DRHLLKQCQVRLSWSPA--EDHNAPIEKYDIEFEDKKMEPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG P T+ + E P+ P V G + + +T
Sbjct: 678 KLSP---YIHYTFRVTAINKYGPGEPSPASETVLTPEAAPEKNPVDVRGEGNETNNMVIT 734
Query: 411 WNPIELIREN-------IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
W P++ + N ++ R G R W+E ++ + ++
Sbjct: 735 WKPLKWMDWNAPQVQYRVQWRPQGVRGAAWQE-----------QILSKPFLVVTNTSTFV 783
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++V A N+ G+GPE + + PQ P +K +N + V V W V P+ +
Sbjct: 784 PYEIRVQAVNSQGKGPEPHVTIGYSGEDFPQASPQLDGVKILNSSAVLVKWWPVDPAQVK 843
Query: 524 EPIIGYKVRVW-------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY V W + + R + ++P NT A + L P YH+ V AF+
Sbjct: 844 GHLRGYNVTYWWEGSQRKHSKRHVHRGH-VVVP-ANTTSAILSGLRPYSSYHLEVQAFNG 901
Query: 577 GGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
G G S ITF E + L S T LL+
Sbjct: 902 RGAGPASE--ITFSTPEGVPGHPEALHLECQSDTSLLL 937
>gi|426257394|ref|XP_004022312.1| PREDICTED: neural cell adhesion molecule L1 isoform 3 [Ovis aries]
Length = 1252
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 496
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 497 QAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTW 552
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 553 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLV 607
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 608 VGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 663
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 664 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 713
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 714 EKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 769
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ P + NS+
Sbjct: 770 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSST 827
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + + ++ + A++ GLQ
Sbjct: 828 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQ 885
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 886 PYSSYRVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 940
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 941 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 1000
Query: 580 G 580
G
Sbjct: 1001 G 1001
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 137/630 (21%), Positives = 243/630 (38%), Gaps = 57/630 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDT-VAQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N HG L++ + Y +LP KI + + T LL A+
Sbjct: 404 EPRNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQSNVTIVAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 511 LQVKDATRIMQGPRST-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 563 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGPVPQLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 735 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 789 TVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 848
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + + ++P NT A + L P Y + V AF+ G G S
Sbjct: 849 VTYWWEGSQRKHSKRHVHKGHVVVP-ANTTSAILGGLQPYSSYRVEVQAFNGRGLGPAS- 906
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 907 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 935
>gi|426257390|ref|XP_004022310.1| PREDICTED: neural cell adhesion molecule L1 isoform 1 [Ovis aries]
Length = 1256
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 496
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 497 QAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTW 552
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 553 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLV 607
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 608 VGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 663
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 664 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 713
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 714 EKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 769
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ P + NS+
Sbjct: 770 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSST 827
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + + ++ + A++ GLQ
Sbjct: 828 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQ 885
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 886 PYSSYRVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 940
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 941 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 1000
Query: 580 G 580
G
Sbjct: 1001 G 1001
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 137/630 (21%), Positives = 243/630 (38%), Gaps = 57/630 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDT-VAQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N HG L++ + Y +LP KI + + T LL A+
Sbjct: 404 EPRNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQSNVTIVAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 511 LQVKDATRIMQGPRST-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 563 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGPVPQLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 735 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 789 TVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 848
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + + ++P NT A + L P Y + V AF+ G G S
Sbjct: 849 VTYWWEGSQRKHSKRHVHKGHVVVP-ANTTSAILGGLQPYSSYRVEVQAFNGRGLGPAS- 906
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 907 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 935
>gi|410981644|ref|XP_003997176.1| PREDICTED: protein sidekick-2 [Felis catus]
Length = 2247
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 155/600 (25%), Positives = 262/600 (43%), Gaps = 44/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 488 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPTRISDAGTYT 547
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y
Sbjct: 548 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYXXXK 606
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 607 DGATLG-MESN----PRIRLDKNGSLHISQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 661
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 662 LPHAPERPVATLSTAERRAINLTWAKPFDGNSPLLRYVLEMSEN-NAPW-----TVLLAS 715
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 716 VD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNV 770
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVV 351
G + I W+P P QN Y I + +F++ T + N+ + +
Sbjct: 771 IASGRTNQSIMIQWQPPPESHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDL 830
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
I +T YE++V A N G G S VT ++ + +P V P V + NST I TW
Sbjct: 831 II-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTW 885
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVK 468
N + I G G+++ W+ + EE + + + + + GL+ T+Y+
Sbjct: 886 NAPS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTS 943
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V+ + G+GP S L RT+ P P + I T++ V+W+ P + + G
Sbjct: 944 VLCFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTG 1000
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ E ++ +R + V TL+ + L+ Y + V A + G G++S+ I+
Sbjct: 1001 YRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQVSASTIS 1058
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 184/426 (43%), Gaps = 53/426 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y + R + W +VS +
Sbjct: 1475 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTVQTRELPSGRWALHSASVSHNASA 1533
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1534 FVVDR------------LKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIV 1581
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1582 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGAKWAELT 1641
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1642 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1701
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW-----KEDNPEETAVYYLSRTT 450
V G +T ++VTW P L +N G + G++I +W + + E +L+
Sbjct: 1702 NVAVHGATATQLDVTWEPPPLESQN--GDIQGYKIYFWEAQAQRRNVTERVKTLFLA--- 1756
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
N + L T Y V V A+N AG+GP S +T + AP PS+V + T+V
Sbjct: 1757 ENGVRLKNLTGYTAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSA-PSSVKFSELTTTSV 1815
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRY 567
+V+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1816 NVSWE--APQFPNGILEGYRL-VYEPCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTY 1872
Query: 568 HMRVLA 573
R+ A
Sbjct: 1873 RFRIRA 1878
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 179/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQ 187
PN+ ++ GL +T + E + G++S T I G PP LPG +
Sbjct: 1020 PNVTLEYRVTGLTALTTYTI----EVAAMTAKGQGQVSAST--ISSGVPPELPGAPTNLG 1073
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W V H + E D R
Sbjct: 1074 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNEPD---ARS 1128
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
E L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 1129 MEVPE--LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSL 1186
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + + +TL + R+ E+
Sbjct: 1187 WLRWMPLPEMEYNGNPESVGYKI---KYSRADGHGKTLSH-----VVQDRVEREYTIEDL 1238
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V WN I
Sbjct: 1239 EEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPE 1298
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
N G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 1299 ADRN--GLVLGYKVMYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 1356
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y+V
Sbjct: 1357 DGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQV 1409
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 173/413 (41%), Gaps = 14/413 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 965 EDVPGPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 1023
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 1024 LEYRVTG---------LTALTTYTIEVAAMTAKGQGQVSASTISSGVPPELP-GAPTNLG 1073
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+++ + P K + + + E + + +P
Sbjct: 1074 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLVHQLTNEPDARSMEVPE 1133
Query: 356 EFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y +++ +N VG P S+ I + + P +AP V R + T++ + W P+
Sbjct: 1134 LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPL 1193
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ N +G++IKY + D +T + + I L+ T+Y V+V A+N
Sbjct: 1194 PEMEYNGNPESVGYKIKYSRADGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1253
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G GP S+ + RT P P+ V +++ V W + + ++GYKV
Sbjct: 1254 IGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYK 1313
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1314 EKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1365
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 181/433 (41%), Gaps = 34/433 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R + + +
Sbjct: 1165 LQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRADGHGKTLS-- 1222
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1223 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1274
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1275 GPTNVSALATTSSSMLVRWNEIPEADRNGLVLGYKVMYKEK-DSDSQPRFWLVEGNSSRS 1333
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1334 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1391
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I + HR+ + V L+ + R + GL+P++ Y +
Sbjct: 1392 LIWQPPAAPNGIILAYQVTHRLNATTANT---ATVEVLAPSARQYT-ATGLKPESVYLFR 1447
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1448 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1505
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRM--- 582
Y V+ E+ R V + A +VD L P Y RV A ++ GD
Sbjct: 1506 RYYTVQTRELPS--GRWALHSASVSHNASAFVVDRLKPFTSYKFRVKATNDIGDSEFSEE 1563
Query: 583 SSPAITFQMGEEK 595
S P T Q ++
Sbjct: 1564 SEPLTTLQAAPDE 1576
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 135/341 (39%), Gaps = 30/341 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P E QN
Sbjct: 1668 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVAVHGATATQLDVTWEPPPLESQN 1726
Query: 318 APNIYYKI-FW----RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
YKI FW +++N TE ++ L E G VR+ + YT Y V V A N
Sbjct: 1727 GDIQGYKIYFWEAQAQRRNVTERVKTLFLAENG------VRLKNLTGYTAYMVSVAAFNA 1780
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
G GP S + + P AP V +T++NV+W + G L G+R+
Sbjct: 1781 AGDGPRSTPTRGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLV 1835
Query: 432 Y---WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
Y D + + + W + L Y ++ A GPE E + T
Sbjct: 1836 YEPCTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIRA-KTFTYGPEIEANVT-T 1893
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
P V I + + + W P + PI Y + D+ + I
Sbjct: 1894 GPGEGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDI 1951
Query: 549 P---VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
P T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1952 PKEVTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1990
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTATNVHG 67
I C + P P +W KD ++ G + + G+ L IS + DD+G++ C A N G
Sbjct: 401 IPCRAKGVPPPSIIWYKDAAVVEVGRLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAG 460
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
++ L V + P T+ ++ L C T A W G RI +
Sbjct: 461 EVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI--L 515
Query: 128 DLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ P ++ G L ++ +DAG Y C+ ++ G ++V
Sbjct: 516 ASGSVQLPRFTLLESGSLLVSPTRISDAGTYTCLATNSRGVDEASADLVV 565
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1907 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1963
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1964 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1997
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 126/625 (20%), Positives = 217/625 (34%), Gaps = 99/625 (15%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 200 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 259
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + + C A+ L+
Sbjct: 260 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 319
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ W +GV + G D N L I + +DAG YEC + S++
Sbjct: 320 LHITWKKDGVPLSGGISDYNR-----------RLTIPGPTGSDAGYYECEAALRSSSIPS 368
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ + H T+ + D + + II W+
Sbjct: 369 VVRGAYLSVLEPPQF---VKEPDRHITAEMEKVMDIPCRAKGVPPPSII--------WYK 417
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQY 280
+ V ++R+ R + ++ + LVP T F+ A N G Y +S +P
Sbjct: 418 DAAVVEVGRLNRFRQRGDGGLQISGLVPDDTGMFQCFARNAAGEVQTSTYLAVTSIAPNI 477
Query: 281 NT-PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDT 333
P D S + G + S P P I W+K
Sbjct: 478 TRGPLD------STVIDGMSVVLACETSGAPRP-----------AITWQKGERILASGSV 520
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ TL E G++ ++ RI YT + +++ +++V
Sbjct: 521 QLPRFTLLESGSLLVSPTRISDAGTYTCLATNSRGVDEAS----ADLVVWARTRITKPPQ 576
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP----EETAVYYLSRT 449
Q V S VT +P R +R E NP ++ ++S+T
Sbjct: 577 DQSVIKGTQASMVCGVTHDP----RVTVRYXXXKDGATLGMESNPRIRLDKNGSLHISQT 632
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
W+ +G Y +V++ G S R AP++P +
Sbjct: 633 ---WSGDIG-----TYTCRVLS--AGGNDSRSAHLRVRQLPHAPERP--VATLSTAERRA 680
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+++TW P P++ Y + + E + + ++ P ++ + L P + Y
Sbjct: 681 INLTW--AKPFDGNSPLLRYVLEMSENNAPWTVLLASVDPEATSV--MVKGLVPARSYQF 736
Query: 570 RVLAFSNGGDGRMSSPAITFQMGEE 594
R+ A ++ G G+ S + EE
Sbjct: 737 RLCAVNDVGKGQFSKDTERVSLPEE 761
>gi|224070363|ref|XP_002190771.1| PREDICTED: protein sidekick-1 [Taeniopygia guttata]
Length = 2194
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 162/601 (26%), Positives = 250/601 (41%), Gaps = 47/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
EG + C AP+P WKK I+ SG R + E+G L I+PV D+G Y+
Sbjct: 468 EGMTAVLTCEVSGAPRPAISWKKGEQILASGSVQIPRFVLLESGGLQIAPVFLQDAGNYT 527
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P T+ LRC A + + + Y+W
Sbjct: 528 CCAANSEGALNAFVMLTVWNRTSIVHP-PEDSTVIKGTTATLRCEATHDPRISIRYLWKK 586
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG LL I+ D G+Y C V S+ G S + V
Sbjct: 587 DSAVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVVSSGGNDSRTARLEVIEL 642
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVI 233
P P + + S + W P+ +Y + N NS W N+ +
Sbjct: 643 PHSPQNLVATLNSSYSRSVVLSWVRPFDGNSPVLYYVVELSEN-NSPWKVHLSNLDPKMT 701
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V L P TY+F+V A N++G G S+ + + P + P P
Sbjct: 702 GVTVSG------------LTPARTYQFRVCAVNQVGKGRYSTETSRLMLPEEPPSAPPKN 749
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 352
I G + + W+P P + N Y + +R E+Q K + I
Sbjct: 750 IVASGRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCL 806
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T+YE++V + N G G S VT ++ + +P PQ V NST I WN
Sbjct: 807 VKDLIIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWN 866
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVM 470
P ++ I G G+++ W D PE V ++ + I L+ T YY V+
Sbjct: 867 PPP--QQFINGINQGYKLLAWPVDAPESVTVVTIAPDFHGVHSGCITNLRKFTSYYTSVL 924
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIG 528
+ G+GP S L RT KP + H+ I T++ V+W+ P + I G
Sbjct: 925 CFTTPGDGPRSPPQLLRTLE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIITG 979
Query: 529 YKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
Y++ WEV ++ SR T+ +TL+ I LS Y + V A + G G ++S I
Sbjct: 980 YQIS-WEVYGRNESRLARTL--SNSTLEYKITGLSSLTTYTIEVAAVTAQGSGWVTSSTI 1036
Query: 588 T 588
+
Sbjct: 1037 S 1037
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 177/410 (43%), Gaps = 43/410 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V S + W G+ PI ++ + R + W S + + + I
Sbjct: 1464 DVSSRSLVLTWLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSI--------SHEATSCII 1515
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1516 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1575
Query: 310 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------NVGIA 349
P E N + Y+I++R+ +N + ++E + + +
Sbjct: 1576 PPKAESVNGLLLGYRIYYRELDYDTGPGTESKTIQNPSALRAELTPQSSFKTVNSSSALT 1635
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ Y YEV + A N +G P S V +F E P +APQ + +++ + +
Sbjct: 1636 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPALAPQNIQVNSLSASQLEL 1695
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
TW+P +N G + G++I YW+ D + E+ V +L T+ + L T+Y
Sbjct: 1696 TWDPPPADSQN--GIIQGYKIYYWESDTLNDTEKVKVLFLPETS---VRLKNLTSHTRYL 1750
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
V + A+N AG+GP S RT++ AP PS + I TT++V+W P+ +
Sbjct: 1751 VCISAFNAAGDGPRSSPAQGRTHQAAPSA-PSFLAFSEITCTTLNVSWG--EPTAANGVL 1807
Query: 527 IGYKVRVWE---VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
GY+V V+E Q +S+ I + DL+ G Y RV A
Sbjct: 1808 QGYRV-VYEPLAPVQGVSKVVTVDIKGNWQRWLKVRDLTKGMTYLFRVQA 1856
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 5/253 (1%)
Query: 339 TLKEYGNVGIA-VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQG 396
TL E N A ++ +P+ YT Y +++ +N VGP P S+ + + + P VAP
Sbjct: 1095 TLHEVENEPDAQMLEVPNLTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAPPDVAPGS 1154
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V R + T++ + W P+ + N +G+RI+ W+ D P + L+ +
Sbjct: 1155 VTVRTASETSLWLRWVPLPDTQYNGNPESVGYRIRAWRADLPAPALLKVLADRLARECTL 1214
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
LQ T+Y +++ A+N G GP SE RT P PP V + ++ T + +TW
Sbjct: 1215 EELQEWTEYELQIQAFNAIGAGPWSEAVRGRTRESVPSAPPENVSAEAVSSTQILLTWAA 1274
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFS 575
V S + I+GYK+ D D + T+ GN + ++ L Y ++VLAF+
Sbjct: 1275 VPESEQNGLILGYKILYKAKDLDSEPKSQTV--RGNHTQSVLLSGLRKFVLYELQVLAFT 1332
Query: 576 NGGDGRMSSPAIT 588
GDG SSPA+T
Sbjct: 1333 RIGDGVPSSPAVT 1345
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 180/422 (42%), Gaps = 28/422 (6%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1032 TSSTISSGVPPELPGAPTNLVISNISPRSATLQFRPGYDGKTSISKWIVEGQVG---VLG 1088
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+ E V EV+ + + N L P++ Y F++ N +G S PS T
Sbjct: 1089 DEEEWVTLHEVENEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGPSPLSQPSRVIQTLQAP 1147
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEY 343
P AP + L + W PLP + N ++ Y+I WR + L +
Sbjct: 1148 PDVAPGSVTVRTASETSLWLRWVPLPDTQYNGNPESVGYRIRAWRADLPAPALLKVLADR 1207
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ + +TEYE+++QA N +G GP SE V + E +P P+ V + +
Sbjct: 1208 LARECTLEELQE---WTEYELQIQAFNAIGAGPWSEAVRGRTRESVPSAPPENVSAEAVS 1264
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
ST I +TW + +N G ++G++I Y +D E + L+ GL+
Sbjct: 1265 STQILLTWAAVPESEQN--GLILGYKILYKAKDLDSEPKSQTVRGNHTQSVLLSGLRKFV 1322
Query: 464 KYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y ++V+A+ G+G P S ERT AP PP + + T+V + W+
Sbjct: 1323 LYELQVLAFTRIGDGVPSSPAVTERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP-----P 1376
Query: 523 EEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGG 578
EEP I+GY+V ++ T + VG+T+ DLSP Y R A + G
Sbjct: 1377 EEPNGIILGYQVAYRLASSSPNKF--TTVEVGSTVRQFTATDLSPESAYIFRTSAKTRQG 1434
Query: 579 DG 580
G
Sbjct: 1435 WG 1436
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 177/437 (40%), Gaps = 51/437 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y++ R +S F E +G V
Sbjct: 1353 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQVAYRLASSSPNKFTTVE--VGSTVR 1410
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1411 QFTATD-------LSPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPRQVMTPQ 1462
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G + S+ LP ++P Y+ + R+ ++Q+ + ++ + F
Sbjct: 1463 GDVSSRSLVLTWLPGSDGSSPIRYFTVQVRELPHGDWQTYSSSISHEATSCIIESLNPF- 1521
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++V+A ND+G E+E VT +D+P P V ++++ V W P +
Sbjct: 1522 -TSYKLRVKATNDIGDSDFSAETEAVTTL--QDVPDEPPSSVLVTPHTTSSVLVQWQPPK 1578
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDT----------- 463
E++ G L+G+RI Y + D +T S+T +N AL L P +
Sbjct: 1579 A--ESVNGLLLGYRIYYRELDY--DTGPGTESKTIQNPSALRAELTPQSSFKTVNSSSAL 1634
Query: 464 ------------KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+Y V + AYN GE P S AP P + + ++ + +
Sbjct: 1635 TTYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPALAPQNIQVNSLSASQLE 1694
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+TW + I GYK+ WE D D + +P + +L+ RY +
Sbjct: 1695 LTWDPPPADSQNGIIQGYKIYYWESDTLNDTEKVKVLFLP---ETSVRLKNLTSHTRYLV 1751
Query: 570 RVLAFSNGGDGRMSSPA 586
+ AF+ GDG SSPA
Sbjct: 1752 CISAFNAAGDGPRSSPA 1768
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 175 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
I GP G PG Q + V K+++ T+QWT+G + +P T Y I AR + W
Sbjct: 1869 ITAGPAEGSPGSPQEILVTKSASGLTLQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1923
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ K++ R + L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1924 MFVKDIPRSATSYTVVGLDKLRQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1980
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 6/172 (3%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P P VW KD + R K+ +G L I + D+GI+ C A+N
Sbjct: 378 DVDILCQAMGVPIPTLVWYKDSVPLSRLENPRYKVLLSGGLRIHALRPQDAGIFQCFASN 437
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + L V + + Q P T+ L C +++ +
Sbjct: 438 QAGEIHTYTYLDVTNIKPAFIQPPEDTTVTEGMTAVLTCEVSGAPRPAISWKKGEQILAS 497
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ + + ++ G L+I DAG Y C ++ G ++ + V
Sbjct: 498 GSVQIPRF----VLLESGGLQIAPVFLQDAGNYTCCAANSEGALNAFVMLTV 545
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 53/366 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V+A +G G PSSP+ T D P P R+ ++ + I W+P E+ N
Sbjct: 1324 YELQVLAFTRIGDGVPSSPAVTERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP--PEEPN 1380
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE--YEVKVQAINDVGPG 375
+ Y++ +R + + + T++ VG V + + E Y + A G G
Sbjct: 1381 GIILGYQVAYRLASSSPNKFTTVE----VGSTVRQFTATDLSPESAYIFRTSAKTRQGWG 1436
Query: 376 PESEVVTIFSAEDMPQVAP--QGVFSRG-FNSTAINVTW-------NPIELIRENIRGRL 425
E T+ + E + AP Q + +G +S ++ +TW +PI +R
Sbjct: 1437 EPLEA-TVITTEKRERPAPPRQVMTPQGDVSSRSLVLTWLPGSDGSSPIRYFTVQVRELP 1495
Query: 426 IGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP-ESERY 484
G Y + E T+ +I L P T Y ++V A N+ G+ +E
Sbjct: 1496 HGDWQTYSSSISHEATS-----------CIIESLNPFTSYKLRVKATNDIGDSDFSAETE 1544
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS--- 541
T + P +PPS+V + ++V V W+ ++GY++ E+D D
Sbjct: 1545 AVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQPPKAESVNGLLLGYRIYYRELDYDTGPGT 1604
Query: 542 -----------RANDTIIPVGNTLDA-------DIVDLSPGKRYHMRVLAFSNGGDGRMS 583
RA T T+++ ++ L KRY + + A++ G+ S
Sbjct: 1605 ESKTIQNPSALRAELTPQSSFKTVNSSSALTTYELTQLKKYKRYEVLMTAYNVIGESPTS 1664
Query: 584 SPAITF 589
+P F
Sbjct: 1665 TPVEVF 1670
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 72/193 (37%), Gaps = 26/193 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG+ I R I L+I VS D+G Y A N + I
Sbjct: 194 PRPQVTWFRDGHKIIPSSRIAITLENQLVILGVSETDAGGYYVQAVNEKNGENKTSPFIH 253
Query: 78 LHGPSYYEQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L + P T +A L C A+ L ++ W NG++I
Sbjct: 254 LSVARASSPPASAAPAMVIRPHNTSVVAGSSEATLECVANARPLERLSVTWKRNGIKI-- 311
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL- 182
T I+ G L ITN + AD G Y C K ST K + + PP
Sbjct: 312 -------TSGISSFGRRLTITNPTSADVGMYFCEAKLRESTEEPARAKAFLSILEPPYFT 364
Query: 183 --PGGVQVVEVHK 193
P V + EV K
Sbjct: 365 AEPQNVILAEVEK 377
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 28/180 (15%)
Query: 9 TIFCNPEAAPKPKF--VWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 62
T+ C A P + WK++G I SG GRR L I+ + D G+Y C A
Sbjct: 287 TLECVANARPLERLSVTWKRNGIKITSGISSFGRR-------LTITNPTSADVGMYFCEA 339
Query: 63 TNVHGMDE---SKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWT 118
+E +K L +L P Y+ P + +A +++ + C A + + +W
Sbjct: 340 KLRESTEEPARAKAFLSILE-PPYFTAEPQNVILAEVEKDVDILCQAMGVPIPTL--VWY 396
Query: 119 HNGVRIGNMDLNELETP--NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ V L+ LE P + + GGL I DAG ++C + G+I T T + V
Sbjct: 397 KDSV-----PLSRLENPRYKVLLSGGL-RIHALRPQDAGIFQCFASNQAGEIHTYTYLDV 450
>gi|426257392|ref|XP_004022311.1| PREDICTED: neural cell adhesion molecule L1 isoform 2 [Ovis aries]
Length = 1247
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 432 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 491
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 492 QAAN----DQSNVTIVANLQVKDATRIMQGPRSTIEKRGSRVMFTCQASFDPSLQHSTTW 547
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 548 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLV 602
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 603 VGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 658
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 659 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 708
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 709 EKNPVDVKGEGNETNNMIITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 764
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ P + NS+
Sbjct: 765 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSST 822
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + + ++ + A++ GLQ
Sbjct: 823 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVPANTTSAILGGLQ 880
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 881 PYSSYRVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 935
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 936 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 995
Query: 580 G 580
G
Sbjct: 996 G 996
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 137/630 (21%), Positives = 243/630 (38%), Gaps = 57/630 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDT-VAQC 398
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N HG L++ + Y +LP KI + + T LL A+
Sbjct: 399 EPRNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 445
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 446 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQSNVTIVAN 505
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 506 LQVKDATRIMQGPRST-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 557
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 558 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDMVESQAELLVVGSPGPVPQLELS- 615
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 616 -DRHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 672
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 673 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMIITW 729
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 730 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 783
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 784 TVNSQGKGPEPQITIGYSGEDYPQAIPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 843
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + + ++P NT A + L P Y + V AF+ G G S
Sbjct: 844 VTYWWEGSQRKHSKRHVHKGHVVVP-ANTTSAILGGLQPYSSYRVEVQAFNGRGLGPAS- 901
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 902 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 930
>gi|47215393|emb|CAG01090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1958
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 144/601 (23%), Positives = 258/601 (42%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 133 DGTSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHLSDAGTYT 192
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + + P ++ + C + + V ++W
Sbjct: 193 CMASNSRGIDEASADLLVW-ARTRITKPPQDQSVIKGTKAVMACGVAHDPSVTVRHVWEK 251
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G I D+N +P + +D G L I+ D G Y C V S G S + V
Sbjct: 252 SGTAI---DVNA--SPRLRLDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 306
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN---WNSTWFNVSEHVI 233
P P + K + + W P+ Y + N W N+
Sbjct: 307 LPHAPENPVALLSTTEKRAINLTWAQAFDGNSPLIRYILEVSENNAPWTVLLANIEPEST 366
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V L+P +Y+F++ A N++G G+ S + + P + P P
Sbjct: 367 GVTV------------GGLIPARSYQFRLCAVNDVGRGQFSKETDRLTLPEEPPSAPPQT 414
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN P Y I + D + ++ T + ++ +
Sbjct: 415 VIASGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQNSLLLED 474
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST + +T
Sbjct: 475 LII-----WTNYEIEVAAYNGAGRGTYSHKVTEWTLQGVPTVPPGNVHAEAVNSTTVRLT 529
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
W+ + I G G+++ W+ E ++ + + + + I GL+ T+YY
Sbjct: 530 WSAPS--PQFINGINQGYKLLAWEPGRTNEASMVTVRPNFQDSIHVGHISGLKKFTEYYT 587
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S RT+ P + I T++ V+W+ P + +
Sbjct: 588 SVLCFTTPGDGPRSPPLRFRTHEDTPGA-VGHLSFTDILDTSLKVSWK--EPQEKNGLLT 644
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + +T + + L+ Y ++V A ++ G G++S+ I
Sbjct: 645 GYRISWEEFNRTNTRVTHYL--PNSTQEYKVTGLTALTTYTIQVAAMTSKGQGQLSASTI 702
Query: 588 T 588
+
Sbjct: 703 S 703
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 177/442 (40%), Gaps = 76/442 (17%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V + W G+ P+ +Y + +R +S W V + E Y I
Sbjct: 1159 DVQARRVLLSWEPGSDGLSPVRYYTVQSRELPDSNW-TVHSASVSHETHSY-------IV 1210
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+F+V + N++G E S S T D P +AP+ + + + W+
Sbjct: 1211 TRLKPFTSYQFRVKSTNDIGDSEYSQESEAITTLQDAPDRAPTILSVTPHTTTSVLVRWQ 1270
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN--------VGIAVVRIPSEFYYTE 361
P + N + +++ +R+ + ++ T++ + + +R SE T+
Sbjct: 1271 PPSEDHINGVLLGFRVRYRELHYDRLRTFTVRTVNSPSTNWADLTALYSIRNLSESSLTQ 1330
Query: 362 YE-----------VKVQAINDVGPGPESEVVTIFSAED---------------------- 388
YE V++ N VG GP S +F E
Sbjct: 1331 YELDKLSKHKRYEVRLSVYNAVGEGPISAPQEVFVGEAGMCLLTLTSRSVIIILTTCILV 1390
Query: 389 ----------MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK---E 435
+P P V + +T ++VTW+P L +N G + G+++ +W+
Sbjct: 1391 SCCFTCLPVLVPTSPPLNVMVQSSTATQLDVTWDPPPLDAQN--GDIQGYKVYFWEYQLR 1448
Query: 436 DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495
+ E +L + G T Y + V A+N AG+GP S RT + AP
Sbjct: 1449 NETERLRTLFLPELGVKLKNLTGY---TTYMISVAAFNAAGDGPRSLPTRGRTQQAAPSA 1505
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE----VDQDMSRANDTIIPVG 551
PS +H + T+V+V+W P I GY++ V+E +D +S+ +
Sbjct: 1506 -PSFIHFSELTTTSVNVSWG--EPKQANGIIEGYRL-VYEPCTPID-GVSKVVTVDVKGS 1560
Query: 552 NTLDADIVDLSPGKRYHMRVLA 573
L I DL+ G Y+ R+ A
Sbjct: 1561 TPLWMKIKDLADGITYNFRIRA 1582
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 167/382 (43%), Gaps = 32/382 (8%)
Query: 166 GKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
G++S T I G PP LPG + + + T+Q+ G I+ + + A+
Sbjct: 695 GQLSAST--ISSGVPPELPGPPTNLAISNIGPRFVTLQFKPGYDGKTSISCWVVEAQARC 752
Query: 222 NSTWFNVSEHVIGKEVDRYTGRKEA-SIENV-LVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
++ + E+ V + + +A S+E + L P++ Y F++ N +G P S +
Sbjct: 753 STAIGVIGENEEWLLVHQLSNEPDARSLEVLDLNPYTFYRFRMRQVNIVGNESPKSAFQK 812
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA-PNI--YYKIFWRKKNDTEFQ 336
A P + + W PLP + N P++ Y +W+ +
Sbjct: 813 DRNTAGLSRCLPRQRDAAYSQRDQPVARWVPLPEWEYNGNPDLVGYRVQYWKAGSKGGVL 872
Query: 337 SETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
S + + R+ EF +TEYEV+VQAIN +G GP S+ V + E +P
Sbjct: 873 SHVIMD---------RLEREFTIEDLEEWTEYEVRVQAINGIGSGPWSQPVHGRTRESVP 923
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V + S++I V W E+ + G ++G+++ Y ++D+ + + + T
Sbjct: 924 SSGPANVSAFATTSSSILVRWG--EVPHADRNGLILGYKVVYKEKDSDTAPSSWSVEGNT 981
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTT 509
+ + GL Y ++V+A+ G+G S LERT P PP + + T+
Sbjct: 982 SHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSILERTLDDVP-GPPVGILFPEVRTTS 1040
Query: 510 VHVTWRYVSPSFEEEPIIGYKV 531
V + W+ P+ I+ Y++
Sbjct: 1041 VRLIWQ--PPAQPNGIILAYQI 1060
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 359 YTEYEVKVQAINDVG-PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
YT Y +++ +N VG P+S + + + P+ + W P+
Sbjct: 788 YTFYRFRMRQVNIVGNESPKSAFQKDRNTAGLSRCLPRQRDAAYSQRDQPVARWVPLPEW 847
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
N L+G+R++YWK + + + I L+ T+Y V+V A N G
Sbjct: 848 EYNGNPDLVGYRVQYWKAGSKGGVLSHVIMDRLEREFTIEDLEEWTEYEVRVQAINGIGS 907
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S+ RT P P+ V +++ V W V + I+GYKV E D
Sbjct: 908 GPWSQPVHGRTRESVPSSGPANVSAFATTSSSILVRWGEVPHADRNGLILGYKVVYKEKD 967
Query: 538 QDMSRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D + ++ ++ GNT + + L Y ++VLAF+ GDGR SSP+I
Sbjct: 968 SDTAPSSWSV--EGNTSHSVQLTGLGKYVLYEIQVLAFTRIGDGRSSSPSI 1016
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + T+ T+ WT G PIT Y I AR + W ++ I KEV YT E
Sbjct: 1612 ISRYGTALTLHWTSGDQGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLEMLR 1670
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
E V TY+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1671 EGV-----TYDFRVIAVNDYGYGTPSAPSPSISAQKVSPF 1705
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 174/421 (41%), Gaps = 73/421 (17%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V+A +G G SSPS T D P P I + + + W+P + N
Sbjct: 996 YEIQVLAFTRIGDGRSSSPSILERTLDDVP-GPPVGILFPEVRTTSVRLIWQP--PAQPN 1052
Query: 318 APNIYYKIFWRKKND------TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
+ Y+I +R+ + + S + ++Y G+ + Y ++ A
Sbjct: 1053 GIILAYQITYRRNSSNINAATVDVLSPSARQYTATGLKAELV--------YVFRLTAQTR 1104
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGV--FSRGFNSTAINVTWNPIELIR-----ENIRGR 424
G G +E + + + + + Q V + GF T +++ P R E+++ R
Sbjct: 1105 KGWGEAAEALVVTTEKRGTRRGQQSVPATALGFKCTC-HLSARPQPTSRPVVPQEDVQAR 1163
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTR-----NWA-------------LIVGLQPDTKYY 466
+ + W+ + + V Y + +R NW ++ L+P T Y
Sbjct: 1164 RV---LLSWEPGSDGLSPVRYYTVQSRELPDSNWTVHSASVSHETHSYIVTRLKPFTSYQ 1220
Query: 467 VKVMAYNNAGEGPES-ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+V + N+ G+ S E T + AP + P+ + + T+V V W+ S
Sbjct: 1221 FRVKSTNDIGDSEYSQESEAITTLQDAPDRAPTILSVTPHTTTSVLVRWQPPSEDHINGV 1280
Query: 526 IIGYKVRVWEVDQDMSR--------------ANDTII-PVGNTLDADIVD-----LSPGK 565
++G++VR E+ D R A+ T + + N ++ + LS K
Sbjct: 1281 LLGFRVRYRELHYDRLRTFTVRTVNSPSTNWADLTALYSIRNLSESSLTQYELDKLSKHK 1340
Query: 566 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAF 625
RY +R+ ++ G+G +S+P F +GE +G L S ++++++++ + + F
Sbjct: 1341 RYEVRLSVYNAVGEGPISAPQEVF-VGE-----AGMCLLTLTSRSVIIILTTCILVSCCF 1394
Query: 626 S 626
+
Sbjct: 1395 T 1395
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 11/167 (6%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSC 60
GE N + C P+P VW KD I R ++ G+L I+ + DD+G++ C
Sbjct: 42 GENNN-PLLC--PGTPQPDIVWYKDAAPISPVKIPRYRVLVGGSLQINGLLPDDTGMFQC 98
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G ++ L V P + ++ L C T A W
Sbjct: 99 FARNLAGEIQTNTYLAVTSIAPNITAGPADSAVIDGTSVILHC--ETSGAPRPAITW-QK 155
Query: 121 GVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVG 166
G R+ + ++ P ++ G L I+ + +DAG Y C+ ++ G
Sbjct: 156 GERV--LASGSVQLPRFTLLESGSLLISPSHLSDAGTYTCMASNSRG 200
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 124/325 (38%), Gaps = 27/325 (8%)
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FW--RKKNDTE-FQSE 338
P P P + L ++W+P P + QN YK+ FW + +N+TE ++
Sbjct: 1398 PVLVPTSPPLNVMVQSSTATQLDVTWDPPPLDAQNGDIQGYKVYFWEYQLRNETERLRTL 1457
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
L E G V++ + YT Y + V A N G GP S + + P AP +
Sbjct: 1458 FLPELG------VKLKNLTGYTTYMISVAAFNAAGDGPRSLPTRGRTQQAAPS-APSFIH 1510
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAVYYLSRTTRNWAL 455
+T++NV+W + G + G+R+ Y D + + +T W
Sbjct: 1511 FSELTTTSVNVSWGE----PKQANGIIEGYRLVYEPCTPIDGVSKVVTVDVKGSTPLWMK 1566
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
I L Y ++ A GPE E + + PP I +T
Sbjct: 1567 IKDLADGITYNFRIRA-KTLTYGPEVEANITTGPGEGAPGPPGEPFISRYG---TALTLH 1622
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP---VGNTLDADIVDLSPGKRYHMRVL 572
+ S PI Y + D+ + IP TL+ ++ L G Y RV+
Sbjct: 1623 WTSGDQGRAPITRYVIEARPSDEGLWDILIKDIPKEVTSYTLNLEM--LREGVTYDFRVI 1680
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEF 597
A ++ G G S+P+ + + F
Sbjct: 1681 AVNDYGYGTPSAPSPSISAQKVSPF 1705
>gi|403287224|ref|XP_003934852.1| PREDICTED: protein sidekick-1 [Saimiri boliviensis boliviensis]
Length = 2227
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 256/599 (42%), Gaps = 43/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ I+ SG R + E+G L I+PV D+G Y+
Sbjct: 507 DGMTAILRCEVSGAPKPAITWKRENRILASGSVQIPRFMLLESGGLQITPVFIQDAGNYT 566
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + LRC A + + + Y+W
Sbjct: 567 CYAANTEGSLNASAMLTVWNRTSIIHP-PEDHVVIKGTTATLRCGAMHDPRVSLRYVWKK 625
Query: 120 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ N+ L L T I + DG LL I+ D G+Y C + S G S + V
Sbjct: 626 D-----NVVLTPLSTSRIVVEKDGSLL-ISQTWSGDIGDYTCDIVSEGGNDSRMARLEVI 679
Query: 178 GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + H + + W PI +Y I+ + NS W V +G
Sbjct: 680 ELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGP 737
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
E+ T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 738 EMTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIV 790
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 791 ASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVT 847
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 848 DLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPP 907
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAY 472
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 908 P--QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCF 965
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYK 530
G+GP S L T+ KP + H+ I T++ V+W+ P + IIGY+
Sbjct: 966 TTPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIIIGYQ 1020
Query: 531 VRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1021 IS-WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSSTIS 1076
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 41/366 (11%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S V+R
Sbjct: 1503 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSISHEATACVVER------ 1556
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1557 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1610
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 349
I W+P E N Y+I++R+ + + +++TLK + V +
Sbjct: 1611 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSS 1670
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ V ++
Sbjct: 1671 STSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTAS 1730
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G++I YW+ D+ ET + + L TKY
Sbjct: 1731 QLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTKY 1788
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1789 LVSISAFNAAGDGPRSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGI 1845
Query: 526 IIGYKV 531
+ GY+V
Sbjct: 1846 LQGYRV 1851
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + I Y+I +W N S H +
Sbjct: 983 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIIIGYQI----SWEVYGRNDSRLTHTLN 1038
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1039 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGAGLVTSSTISSGVPPDLP-GAPSNL 1090
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1091 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1150
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1151 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVP 1210
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1211 LPDSQYNGNPESVGYRIKYWRSDVQSSALAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1270
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1271 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1330
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D + ++ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1331 RAKDLD-AEPRSHVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1383
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 189/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1069 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1124
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1125 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1177
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1178 RVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1233
Query: 335 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
QS L + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1234 VQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRES 1288
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1289 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDAEPRSHVVRG 1346
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1347 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRL 1405
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1406 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAP 1458
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1459 ESAYIFRLSAKTRQGWG 1475
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N+VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 753 YQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 812
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 813 --GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVF 870
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TT+ W F GYK+ W D
Sbjct: 871 SRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPE 930
Query: 541 SRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ TI P I +L Y VL F+ GDG S+P + +
Sbjct: 931 AVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVW 980
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 192/487 (39%), Gaps = 49/487 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1364 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1423
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1424 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1475
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1476 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1534
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1535 RGEWQTFSSSISHEATACVVERLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1592
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-------------- 436
P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1593 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKTLKS 1650
Query: 437 ----NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1651 PIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFV 1710
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
AP P V + + + + VTW P + I GYK+ WE D ++
Sbjct: 1711 GEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVL 1770
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS-- 606
+ + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1771 FLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPRSDP----QQGRTHQAAPGAPSFLAFS 1825
Query: 607 --ASTTL 611
STTL
Sbjct: 1826 EITSTTL 1832
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P V V +TS ++W D NG P + Y+I W S
Sbjct: 1176 SSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRS 1232
Query: 224 TWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+V + + V DR +E +IE + YE ++ A N +G G P S + T
Sbjct: 1233 ---DVQSSALAQVVSDRL--EREFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1285
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1286 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDAEPRSHVVR 1345
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1346 --GNHTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1402
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1403 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1456
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1457 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1516
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A +V+ L P Y +R+ A ++ G
Sbjct: 1517 SDGASPIRYFTVQVRELPRGEWQTFSSSI--SHEATACVVERLRPFTSYKLRLKATNDIG 1574
Query: 579 DGRMSS 584
D SS
Sbjct: 1575 DSDFSS 1580
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1914 EGSPGSPRDVLVTK-SASELTLQWTEGYAGDTPTTGYVIEARPSDEGLW-----DMFVKD 1967
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1968 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPSMAVSAQVEAPF 2018
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 6/172 (3%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W K+ I R K+ +G L I + +DSGI+ C A+N
Sbjct: 417 TVDIGCRAMGVPLPTLQWYKNAISISKLQNPRYKVLASGGLRIQKLHPEDSGIFQCFASN 476
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ L V + + Q P T+ LRC + + + +
Sbjct: 477 EGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENRILAS 536
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ + + ++ G L+IT DAG Y C +T G ++ + V
Sbjct: 537 GSVQIPRF----MLLESGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTV 584
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 233 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFIH 292
Query: 78 LH-----GPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
L G S E + P I +A L C A + +++ W NGVRI
Sbjct: 293 LSIARDIGTS--ETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEELSVTWKRNGVRI 350
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 351 ---------TSGLHSFGRRLTISNPTSADTGLYVC 376
>gi|348531930|ref|XP_003453460.1| PREDICTED: protein sidekick-2-like [Oreochromis niloticus]
Length = 2174
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 254/598 (42%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 395 DGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYT 454
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + P ++ + C + + V ++W
Sbjct: 455 CMASNSRGIDEASADLVVW-ARTRITTPPQDQSVIKGTKAIMNCGVTHDPSVTVRHVWEK 513
Query: 120 NGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I N P + +D G L I+ D G Y C V S G S + V
Sbjct: 514 EGSVI-----NVQSIPRMRLDADGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVRQ 568
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V + K + + W P+ Y + N N+ W + ++ +
Sbjct: 569 LPHAPENPTAVLSKSEKRAIDLAWAKPFDGNSPLIRYILEVSEN-NAPWAILLANIEPES 627
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
A N L+P +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 628 T--------AVTVNGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIA 679
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
G + I W+P P QN Y + +R +K + + + +
Sbjct: 680 SGRTNQSIMIQWQPPPESHQNGILRGYIVRYRLTGLP--VDNQIKNISSPDVTTLLLEDL 737
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW---NP 413
+T YE++V A N G G S VT ++ + +P +AP V + NST I TW NP
Sbjct: 738 IIWTNYEIEVAAYNGAGLGTFSHKVTEWTLQGVPTIAPGNVQAEAVNSTTIRFTWTAPNP 797
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ +E A+ + + + + + GL+ T+YY V+
Sbjct: 798 -----QFINGINQGYKLLAWEPGKDDEVAMVTVRPNFQDSVHVGYVTGLKKFTEYYTSVL 852
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S RT+ P + I T++ V+W PS + + GY+
Sbjct: 853 CFTTPGDGPRSPPKALRTHEDTPGA-VGHLSFTEILDTSLKVSWS--EPSEKNGVLTGYR 909
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V ++ G G +SS I+
Sbjct: 910 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAGMTSKGQGMLSSSTIS 965
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 172/403 (42%), Gaps = 34/403 (8%)
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 250
V + W G+ P+ +Y + R S W V + E Y I +
Sbjct: 1393 VQARQVLLSWEPGSDGLSPVRYYTVQLRELPESNW-TVHSASVSHEATTY-------IVS 1444
Query: 251 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 310
L P+++Y+F++ A N++G E S S T D P +APS + + I W+P
Sbjct: 1445 RLKPFTSYQFRIKATNDIGDSEYSQESEAITTLQDVPDEAPSILSVTPHTTTSVLIRWQP 1504
Query: 311 LPREKQNAPNIYYKIFWRKKNDTEFQSE-----------------TLKEYGNVGIAVVRI 353
EK N + ++I +R+ +S +L+ + + +
Sbjct: 1505 PSEEKINGILLGFRIRYRELLYDRLRSYIHTVNSASAWAELSAPYSLRNLSDSTLTQYEL 1564
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YE+++ N VG GP S +F E +P PQ V + +T ++VTW+P
Sbjct: 1565 DKLSKHKRYEIRMSVYNAVGEGPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDP 1624
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ +N G + G++I +W+ ET + L T Y + V +N
Sbjct: 1625 PPVDAQN--GDIQGYKIYFWEFQRKNETERMRTLFMPEGGVKLKNLTGYTTYMISVAPFN 1682
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
AG+GP S RT + AP PS +H + T+V+V+W P+F I GY++ V
Sbjct: 1683 AAGDGPRSPPTRGRTQQAAPSA-PSFIHFSELTTTSVNVSWG--EPTFPNGIIEGYRL-V 1738
Query: 534 WEVDQDMSRANDTI-IPVGNT--LDADIVDLSPGKRYHMRVLA 573
+E + + T+ + V T L I DL+ G Y+ R+ A
Sbjct: 1739 YEPSTPVDGVSKTVTVDVKGTGPLWLKIRDLADGVTYNFRIRA 1781
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 173/436 (39%), Gaps = 54/436 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVD 238
PG P G+ EV TS + W A I Y+I + NST N + V+
Sbjct: 1281 PGPPVGILFPEVRTTSVRLIWQSPAQPNGIILAYQITY--HLNSTNSNTATVDVLNPSAR 1338
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGG 296
+YT + N L P + Y F++ A G+GE + +P Q SR +
Sbjct: 1339 QYT------VTN-LKPETVYVFRITAQTRKGWGEAAEALVVTTEKRARP-QPTSRPLVPQ 1390
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF--QSETLKEYGNVGIAVVRIP 354
+ + +SWE P +P YY + R+ ++ + S ++ I P
Sbjct: 1391 KHVQARQVLLSWE--PGSDGLSPVRYYTVQLRELPESNWTVHSASVSHEATTYIVSRLKP 1448
Query: 355 SEFYYTEYEVKVQAINDVGP---GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+T Y+ +++A ND+G ESE +T +D+P AP + +T++ + W
Sbjct: 1449 ----FTSYQFRIKATNDIGDSEYSQESEAITTL--QDVPDEAPSILSVTPHTTTSVLIRW 1502
Query: 412 NPIELIRENIRGRLIGHRIKY--------------------WKEDNPEETAVYYLSRTTR 451
P E I G L+G RI+Y W E + ++ LS +T
Sbjct: 1503 QPPS--EEKINGILLGFRIRYRELLYDRLRSYIHTVNSASAWAELS-APYSLRNLSDSTL 1559
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+ L +Y +++ YN GEGP S P PP V I+ T +
Sbjct: 1560 TQYELDKLSKHKRYEIRMSVYNAVGEGPTSPPQEVFVGEAVPTAPPQNVAIQSATATQLD 1619
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
VTW + I GYK+ WE + + R +P G + +L+ Y +
Sbjct: 1620 VTWDPPPVDAQNGDIQGYKIYFWEFQRKNETERMRTLFMPEGG---VKLKNLTGYTTYMI 1676
Query: 570 RVLAFSNGGDGRMSSP 585
V F+ GDG S P
Sbjct: 1677 SVAPFNAAGDGPRSPP 1692
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 170/425 (40%), Gaps = 38/425 (8%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W++ + +T Y+I + +N T V+ ++
Sbjct: 872 EDTPGAVGHLSFTEILDTSLKVSWSEPSEKNGVLTGYRI-SWEEYNRTNTRVTHYLPNVT 930
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP----YQAP 291
++ R TG L +TY +V G G SS + P + P A
Sbjct: 931 LEYRVTG---------LTALTTYTIEVAGMTSKGQGMLSSSTISSGVPPELPGPPTNMAI 981
Query: 292 SRIGGGG-------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
S IG G G SIS W + N + + + N+ E +S
Sbjct: 982 SNIGPRSINLQFKPGYDGKTSISRWLVEAQVGAVGENEDWLMVHQVFNEPEARS------ 1035
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGF 402
+ +P YT Y +++ +N VG P S+ I + P +AP V R
Sbjct: 1036 -------LEVPGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLPAPPDMAPANVTLRTA 1088
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ T++ + W P+ N +G+R++Y + + + ++ I L+
Sbjct: 1089 SETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGSQGHPLTHVITDRLEREFTIEDLEEW 1148
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y V+V A N G GP S+ RT P P+ V +++ V W V
Sbjct: 1149 TEYEVRVQAVNGIGVGPWSQPVRGRTRESVPSSGPTNVSAFATTSSSILVRWFEVPEPDR 1208
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
I+GYKV E D D S + + T + L Y ++VLAF+ GDGR
Sbjct: 1209 NGLILGYKVVYKEKDSD-SPVHFWTVEGNATHSVQLTGLGKYVLYEIQVLAFTRIGDGRP 1267
Query: 583 SSPAI 587
SSP I
Sbjct: 1268 SSPPI 1272
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 173/402 (43%), Gaps = 53/402 (13%)
Query: 198 IQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 257
+Q++ + G P+TH VI ++R E +IE+ L W+
Sbjct: 1116 VQYSRAGSQGHPLTH-------------------VITDRLER-----EFTIED-LEEWTE 1150
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V A N +G G S P + T P P+ + + + W +P +N
Sbjct: 1151 YEVRVQAVNGIGVGPWSQPV-RGRTRESVPSSGPTNVSAFATTSSSILVRWFEVPEPDRN 1209
Query: 318 APNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG- 375
+ YK+ +++K+ D+ T++ GN V++ Y YE++V A +G G
Sbjct: 1210 GLILGYKVVYKEKDSDSPVHFWTVE--GN-ATHSVQLTGLGKYVLYEIQVLAFTRIGDGR 1266
Query: 376 PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIRGRLIGHRIKYWK 434
P S + + +D+P P G+ +T++ + W +P + G ++ ++I Y
Sbjct: 1267 PSSPPILERTLDDVPG-PPVGILFPEVRTTSVRLIWQSPAQ-----PNGIILAYQITYHL 1320
Query: 435 EDNPEETA-VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493
TA V L+ + R + + L+P+T Y ++ A G G +E + T ++A
Sbjct: 1321 NSTNSNTATVDVLNPSARQYT-VTNLKPETVYVFRITAQTRKGWGEAAEALVVTTEKRAR 1379
Query: 494 QKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVG 551
+P S V K + V ++W S P+ Y V++ +++ +N T+
Sbjct: 1380 PQPTSRPLVPQKHVQARQVLLSWEPGSDGL--SPVRYYTVQL----RELPESNWTVHSAS 1433
Query: 552 NTLDAD---IVDLSPGKRYHMRVLAFSNGGDGRMS--SPAIT 588
+ +A + L P Y R+ A ++ GD S S AIT
Sbjct: 1434 VSHEATTYIVSRLKPFTSYQFRIKATNDIGDSEYSQESEAIT 1475
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA--- 62
VT+ C A P K W+K+G ++ SG F ++SPV D+G Y C A
Sbjct: 213 VTMECVANARPLIKLSISWRKNGVLVNSG--LSDFNRRLTILSPVV-SDAGYYECEAILR 269
Query: 63 -TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
++V + + L VL P + ++ IT + + + C A D+ +W +
Sbjct: 270 SSSVPSVS-AGAYLHVLEPPQFIKEPEKHITAEMEKVVDIPCQARGVPQPDI--VWYKDA 326
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I + + TP + GG L++ D G ++C +++ G++ T T + V
Sbjct: 327 LPI-----DPVRTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNSAGEVQTNTYLAV 377
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 98/269 (36%), Gaps = 39/269 (14%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I + L+I D+G Y A N + + I
Sbjct: 121 PQPQVTWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPIT 180
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 124
L GP+ I + + + C A+ L+ ++ W NGV +
Sbjct: 181 LSVENVGGPADPIAPTIIIPPRNTSVVTGTSEVTMECVANARPLIKLSISWRKNGVLVNS 240
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L I + +DAG YEC + S+V +S + V PP
Sbjct: 241 GLSDFNR-----------RLTILSPVVSDAGYYECEAILRSSSVPSVSAGAYLHVLEPPQ 289
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
++ E H T+ + D R + I+ W+ + + RY
Sbjct: 290 F---IKEPEKHITAEMEKVVDIPCQARGVPQPDIV--------WYKDALPIDPVRTPRYR 338
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELG 269
S++ N L+P T F+ A N G
Sbjct: 339 VLVGGSLQVNGLLPDDTGMFQCFARNSAG 367
>gi|431913512|gb|ELK15187.1| Neural cell adhesion molecule L1-like protein [Pteropus alecto]
Length = 1098
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 225/523 (43%), Gaps = 79/523 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +V++ C A+P+ W+K D GGR + NG L IS S DD+G YSC
Sbjct: 394 GASVSLHCKFFASPEATVSWQKADEAQPLEGGRYRTHRNGTLQISATSPDDAGAYSCWVE 453
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L V + + P + L+L C + + L + W+ G
Sbjct: 454 NAKGKTAVTASLDVRNA-TKLRISPTSPRVPKSHTLELYCESQCDSHLKHSLKLTWSKGG 512
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
+ N + + +DG L ++N + D G Y C ++ + ++ +T V V P
Sbjct: 513 ---EAFETNGTDDGRVTVDGANLTVSNVTVEDEGVYACSAQTALDSVTEETRVTVLDVPD 569
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG +++ E H S + W G + I+ Y I N W +E+ R
Sbjct: 570 PPGSLRLSERHNRSVRLTWEAGDAHNSDISEYIIEFEGNKVDPGRW---------EELAR 620
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G + ++ L P+ Y+F+V A NE
Sbjct: 621 VRGEETTALLP-LAPYVAYQFRVSAVNE-------------------------------- 647
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
PL +QN P + Y++ W+ + E + ET++ + +R+ +
Sbjct: 648 ----------PLKPMEQNGPGLEYRVTWKPQGAPVEREEETVRNH------TLRVMTSSV 691
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y YEV+VQA+N +G GP + V ++S ED P AP+ NST VTW+ + +
Sbjct: 692 YAPYEVQVQAVNHLGAGPAPQAVVLYSGEDYPDAAPEIRGVDVINSTLAKVTWSAVP--K 749
Query: 419 ENIRGRLIGHRIKYWKEDN-------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+++RG L G+ I +WK + P+ V S R+ ++ L+ ++++V V A
Sbjct: 750 DSVRGHLRGYEINWWKTRSLLDGRTLPKRVNVLRFS-GPRSSGMLPALEAFSEFHVTVAA 808
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
YN+ G GPESE + RT P + P+ + + I+ T V+W
Sbjct: 809 YNSRGAGPESEPHAFRTPEGVPGQ-PAFLKVVQIDKDTATVSW 850
>gi|348514834|ref|XP_003444945.1| PREDICTED: neural cell adhesion molecule L1-like protein
[Oreochromis niloticus]
Length = 1331
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 230/491 (46%), Gaps = 36/491 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTAT 63
G +T+ C+ ++P W KD N I G R FE+G +L I + DSG Y+C A+
Sbjct: 512 GKEITMNCSVFSSPPSSISWTKDENAI-EGERFLAFESGQSLRIINAEKGDSGKYTCVAS 570
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAY--IWTHN 120
N+ G L V PP+ T + + + +L C + L + +W +
Sbjct: 571 NMEGSSTVTAVLDVKDATKIVS--PPQNTQVDSGKLAKLMCETEYDASLQDTFELVWRKD 628
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ + ++ G +LEI N + +D G Y C ++++ + S + V P
Sbjct: 629 NKEI---PLSSDKHSRYSVKGAMLEIMNVNLSDQGRYTCTARTSLDEDSATAVLTVRDVP 685
Query: 181 GLPGGVQVVEVHK-TSATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEV 237
P +++ E+ + + W G+ + +T + + N W W KE+
Sbjct: 686 DAPIKLELSELDSPRNVVLSWIPGSDHNSTVTEFVVEYEENRWEPGRW---------KEL 736
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R TG +A+ E L Y+F+V A N +G G PS P+ ++ TP P + P I
Sbjct: 737 QRVTG-NQATAELKLYGNLNYQFRVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENIKIQ 795
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
G + ISWEPL ++N P YK+ +R+ + +E + V +V + +
Sbjct: 796 GHHPHQMEISWEPLSPLERNGPGFEYKVKYRQLGVEDNFTEHM-----VNRSVFLVNNTP 850
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ YE+K+ + N G GPE + VT +S ED+P AP+ + N+T + V+W P+
Sbjct: 851 TFVPYEIKILSRNSYGWGPEPKPVTGYSGEDVPTAAPRDIAVEVINTTVLRVSWTPVP-- 908
Query: 418 RENIRGRLIGHRIKYWKED---NPEETAVYYLSRT---TRNWALIVGLQPDTKYYVKVMA 471
+RGRL G+ + + + NP++ S + R+ ++ GL+P ++Y + V
Sbjct: 909 PATVRGRLGGYNVHWVRRRSLLNPDKILDLSHSMSFSGNRSHVIVPGLEPFSEYKLTVYV 968
Query: 472 YNNAGEGPESE 482
+N G GP+S+
Sbjct: 969 FNKKGNGPKSD 979
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 46/270 (17%)
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVF 398
LK YGN+ Y+ +V A+N +GPGP SE + P P+ +
Sbjct: 748 LKLYGNLN--------------YQFRVYAVNAIGPGPPSEPTERHKTPPAAPDRNPENIK 793
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWAL 455
+G + + ++W P+ + N G +++KY + EDN E V R+ L
Sbjct: 794 IQGHHPHQMEISWEPLSPLERN--GPGFEYKVKYRQLGVEDNFTEHMV------NRSVFL 845
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ Y +K+++ N+ G GPE + + P P + ++ IN T + V+W
Sbjct: 846 VNNTPTFVPYEIKILSRNSYGWGPEPKPVTGYSGEDVPTAAPRDIAVEVINTTVLRVSWT 905
Query: 516 YVSPSFEEEPIIGYKV------------RVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 563
V P+ + GY V ++ ++ MS + GN + L P
Sbjct: 906 PVPPATVRGRLGGYNVHWVRRRSLLNPDKILDLSHSMSFS-------GNRSHVIVPGLEP 958
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V F+ G+G S P +TF E
Sbjct: 959 FSEYKLTVYVFNKKGNGPKSDP-VTFNTPE 987
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 12/175 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS--PVSRDDSGIYSCT 61
+G ++ + C PE P P W K G ++ R F N N L+S V D G Y CT
Sbjct: 328 KGEDLQLECIPEGFPTPSVKWIKMGEVMSP---RVKFNNYNKLLSLSAVEESDEGKYMCT 384
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G +IV P + + P ++ ++CS + A W NG
Sbjct: 385 AENSVGKAVHYFDVIVEEPPKWLTEPPQSQLTVIGSDVHIKCSVSGKP--QPAITWRRNG 442
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
V + N ++ + + + NA D+G Y+C + G I +++
Sbjct: 443 VMFRDDPDNRMQ-----VFDDTVTLLNAKAEDSGVYQCEASNRHGTILANVNIMI 492
>gi|440894049|gb|ELR46614.1| Neural cell adhesion molecule L1 [Bos grunniens mutus]
Length = 1257
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 149/600 (24%), Positives = 258/600 (43%), Gaps = 56/600 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ P + G G + ++ I+W+PL NAP + Y++ WR + E Q ++ +
Sbjct: 715 EKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQ---EMQGAWQEQIVSDP 771
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
VV S F YE+KVQ +N G GPE ++ +S ED PQ +P + NS+ +
Sbjct: 772 FLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTV 829
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQP 461
V W ++ + ++G L G+ + YW E + + ++ + ++ GL+P
Sbjct: 830 LVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSTILGGLRP 887
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
+ Y+V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 888 YSSYWVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PPL 942
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++ V ++ D S+ + +P ++ +LSP RY ++ A + G G
Sbjct: 943 SHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPG 1002
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 137/630 (21%), Positives = 243/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVAN 511
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 512 LQVKDATRIMQGPRSA-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 563
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 564 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS- 621
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 622 -DHHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 678
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 679 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITW 735
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P+E + + + L+V Y +KV
Sbjct: 736 KPLRWMDWN------APQVQYRVQWRPQEMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 790 TVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 849
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + ++ ++P N + L P Y + V AF+ G G S
Sbjct: 850 VTYWWEGSQRKHNKRHVHKGHVVVP-ANATSTILGGLRPYSSYWVEVQAFNGRGLGPAS- 907
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 908 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 936
>gi|431916529|gb|ELK16507.1| Contactin-5, partial [Pteropus alecto]
Length = 713
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 169/351 (48%), Gaps = 10/351 (2%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
I +G+L I S+ D G Y C NV G E + V P+ E P + + +
Sbjct: 3 ILPDGSLRILNASKSDEGKYVCQGENVFGSAEIIASVSVKE-PTRIELTPKRTELTVGES 61
Query: 99 LQLRCSAHTEELLDVAYIWTHNGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEY 157
+ L C A + LDV + WT G I + E+ L I N AG Y
Sbjct: 62 IVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLVHAGRY 121
Query: 158 ECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIA 217
C V++T +S + ++V GPPG PG V V E+ +++AT+ W+ A N P++ Y + A
Sbjct: 122 GCRVQTTADSVSDEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPVSSYNLQA 181
Query: 218 RTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
R+ ++ W V K V + TG E+++ L PW YEF+V+A N +G G+PS+P
Sbjct: 182 RSPFSLGWQTV------KTVPEIITGDMESAMAVDLNPWVEYEFRVVAANPIGTGDPSTP 235
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
S T P AP+ + G G+ +L I+WEP+ E QN Y + +R N T
Sbjct: 236 SRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGW 294
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
E + + R S T +EVKV N+ G GP S++V I SAE
Sbjct: 295 KEKMVTSSEASKFIYRDESVPPLTPFEVKVGVYNNKGDGPFSQIVVICSAE 345
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 390 PQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449
P AP V + + + I V W + I+E++ GR G + Y K+ E+ A +R
Sbjct: 502 PSAAPTDVKATSVSVSEILVAW---KHIKESL-GRPQGFEVGYRKDMEQEDAAETVKTRG 557
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
+ ++ GL+ +T Y+ V AYN AG GP S T + P + PS + + +
Sbjct: 558 NESSVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEQ-QGSQ 616
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+ + W V P E ++GYKV + ++ +T P +V L Y +
Sbjct: 617 LSLGWEPVKPLANESEVMGYKVFYRQEGHSNNQVIETQKPQA------VVPLPDAGVYII 670
Query: 570 RVLAFSNGGDGRMSS 584
V A+S GGDG SS
Sbjct: 671 EVRAYSEGGDGMASS 685
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
KP AP+ + + ++ ++W+ + +E P +++ +RK + E +ET+K GN
Sbjct: 501 KPSAAPTDVKATSVSVSEILVAWKHI-KESLGRPQ-GFEVGYRKDMEQEDAAETVKTRGN 558
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ V + T Y V+A N G GP S V+ + + P AP + +
Sbjct: 559 E--SSVILTGLEGNTLYHFTVRAYNGAGYGPPSSEVSATTKKSPPSQAPSNLRWEQ-QGS 615
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+++ W P++ + ++G+++ Y +E + + T+ +V L Y
Sbjct: 616 QLSLGWEPVKPLAN--ESEVMGYKVFYRQEGHSNNQVI-----ETQKPQAVVPLPDAGVY 668
Query: 466 YVKVMAYNNAGEGPESER 483
++V AY+ G+G S +
Sbjct: 669 IIEVRAYSEGGDGMASSQ 686
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G P + I + E +P+ AP V R + + W P+
Sbjct: 214 WVEYEFRVVAANPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHELVIAWEPVSEE 273
Query: 418 RENIRGRLIGHRIKY-------WKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
+N G G+ + + WKE + E + Y + + P T + V
Sbjct: 274 FQN--GEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDES---------VPPLTPFEV 322
Query: 468 KVMAYNNAGEGPESE 482
KV YNN G+GP S+
Sbjct: 323 KVGVYNNKGDGPFSQ 337
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 256 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315
+ Y F V A N GYG PSS T P QAPS + + LS+ WEP+
Sbjct: 571 TLYHFTVRAYNGAGYGPPSS-EVSATTKKSPPSQAPSNL-RWEQQGSQLSLGWEPVKPLA 628
Query: 316 QNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
+ + YK+F+R++ + Q ET K AVV +P Y ++V+A ++ G
Sbjct: 629 NESEVMGYKVFYRQEGHSNNQVIETQKPQ-----AVVPLPDAGVYI---IEVRAYSEGGD 680
Query: 375 GPESEVVTIFSAEDM 389
G S + + S M
Sbjct: 681 GMASSQIRVPSYSAM 695
>gi|134085228|emb|CAM60094.1| nadl1.1 [Danio rerio]
Length = 1125
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 158/614 (25%), Positives = 260/614 (42%), Gaps = 69/614 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C +P PK W+ +I S + NG+L IS VS +DS Y+C
Sbjct: 443 ATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQMTNGSLKISNVSEEDSNRYTC 502
Query: 61 TATNVHGMDESKGRLIVLH-----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
+ + + L VL+ GP P + + + L C + L
Sbjct: 503 SVSETN--KSISAELEVLNRTKIVGP------PQNLHVIRGSDAILHCKYTVDHNLKSPT 554
Query: 116 I-WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ W +G +I N +E+E G L++ + D G Y C V +T+ +
Sbjct: 555 VQWKKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGIYSCEVSTTLDSDTA 606
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P P +++ E + S TI W N P+T Y I N E
Sbjct: 607 SGYITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI---------EMNEGE 657
Query: 231 HVIGKEVDRYTGRKE--ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ +Y + +E L P+S Y F++ A N +G PS S Y+ PA KP
Sbjct: 658 TPDEGQWQKYRSVSQDIRQLEIHLQPYSKYHFQIRAVNSIGTSAPSEFSLSYSIPAAKPD 717
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ-SETLKEYGNVG 347
+ P + + ISW+ + R + N P YK+FWR+ D+ +E+ +V
Sbjct: 718 RNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAADSGAHWTES-----SVS 772
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + + + +E+KVQA+ND+G PE V +S ED P AP + T++
Sbjct: 773 NPPLLVNNTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTELQKTSV 832
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI----------- 456
V W+P+ E++RG L+G++I Y + P S N +I
Sbjct: 833 MVRWSPVR--PESVRGHLLGYKI-YLRMKGPSGRLRAGRSPAVGNPTVIEVPADAAEKIV 889
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
LQ + Y + + A+N+ GEGP SE E ++ P + + +P+ +T R+
Sbjct: 890 SDLQYYSDYTLTITAFNSKGEGPHSE---ESSFSTPEGAPGPVLFLPFDSPSESEITLRW 946
Query: 517 VSPSFEEEPIIGYKVRVWEV---DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+P I GY ++ EV + +P + + +L+P RY + A
Sbjct: 947 EAPHKPNGEIRGYLLQYQEVVIGSESPQHVESIDLPA--VTEFTLKNLNPESRYTFHLSA 1004
Query: 574 FSNGGDGRMSSPAI 587
++ GDG +PAI
Sbjct: 1005 RNSAGDG---APAI 1015
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C PE P P+ W + + + +K++ N L I V D G Y CTA N
Sbjct: 262 GQTLTLECIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+ + V P Y+ + P + A ++L C A ++ W+ NGV +
Sbjct: 322 SENSVKHHYTVTVEAAP-YWTRRPEEHLYAPGETVRLDCQADGIPAPNIT--WSINGVPV 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
D++ P + G L ++N F+D Y+C + G I T V IVE LP
Sbjct: 379 SGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHIVE----LP 430
Query: 184 GGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 216
+ + AT T D T G P+ H++I+
Sbjct: 431 AQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 468
>gi|119584280|gb|EAW63876.1| contactin 4, isoform CRA_d [Homo sapiens]
Length = 699
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 145/279 (51%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|395845548|ref|XP_003795492.1| PREDICTED: protein sidekick-1 [Otolemur garnettii]
Length = 2210
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 260/600 (43%), Gaps = 45/600 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 489 DGMTAILRCEVSGAPKPAITWKRENHILASGSVQIPRFMLLESGGLQITPVFIQDAGNYT 548
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAHTEELLDVAYIWT 118
C A N G + LIV + + PPK + + LRC A + + ++YIW
Sbjct: 549 CYAANSEGSLNASAMLIVWN--RTFIVRPPKDQVVIKGTMAMLRCGATHDPRITLSYIW- 605
Query: 119 HNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R NM + + I + DG LL I+ D G+Y C + S G S + V
Sbjct: 606 ----RKDNMVITPSSSSRIVVEKDGSLL-ISQTWSGDIGDYTCNIISEGGNDSRTARLEV 660
Query: 177 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
P P + H + + W PI +Y I+ + NS W V +G
Sbjct: 661 IELPHSPQNLLASPNSSHSNTVMLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVG 718
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E+ T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 719 PEMTGIT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNI 771
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRI 353
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 772 VASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLV 828
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T+YE++V A N G G S VT ++ + +P PQ V NST I W P
Sbjct: 829 TDLIIWTQYEIQVAAYNGAGLGIFSRAVTEYTLQGVPTAPPQNVQMEAVNSTTIQFLWTP 888
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMA 471
++ I G G+++ W D PE V ++ + I L+ T Y+ V+
Sbjct: 889 PP--QQFINGINQGYKLLAWPVDVPEAITVVTIAPDFHGIHHGSITNLKKFTAYFTSVLC 946
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGY 529
+ G+GP S L T+ KP + H+ I T++ V+W+ P + I GY
Sbjct: 947 FTTPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGY 1001
Query: 530 KVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
++ WEV ++ SR T+ TL+ I LS Y + V A ++ G G ++S I+
Sbjct: 1002 QIS-WEVYGKNDSRLTHTL--NSTTLEYKIRGLSSLTTYTIEVAAVTSVGSGLVTSSTIS 1058
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 153/604 (25%), Positives = 240/604 (39%), Gaps = 63/604 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 400 VDIICQAMGVPLPTLQWYKDAVSISKLQNPRYKVLSSGGLRIQKLCPEDSGIFQCFASNE 459
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + + Q P T+ LRC + + ++ + G
Sbjct: 460 GGEIQTHTYLDVTNIAPVFTQRPEDTTVTDGMTAILRCEVSGAPKPAITWKRENHILASG 519
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL--P 183
++ + + ++ G L+IT DAG Y C ++ G ++ +IV + P
Sbjct: 520 SVQIPRF----MLLESGGLQITPVFIQDAGNYTCYAANSEGSLNASAMLIVWNRTFIVRP 575
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
QVV + T A ++ GAT+ IT I + N T + S V+ K+ +
Sbjct: 576 PKDQVV-IKGTMAMLRC--GATHDPRITLSYIWRKDNMVITPSSSSRIVVEKDGSLLISQ 632
Query: 244 KEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQYNTPADKPYQAP 291
WS Y +I+ GN+ P SP +P
Sbjct: 633 T----------WSGDIGDYTCNIISEGGNDSRTARLEVIELPHSPQNLLASP-------- 674
Query: 292 SRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG--NVGI 348
+ +SW P N+P +YY I +N++ ++ L G GI
Sbjct: 675 -----NSSHSNTVMLSWVRPF---DGNSPILYY-IVELSENNSPWKVH-LSNVGPEMTGI 724
Query: 349 AVVRI-PSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
V + P+ Y + +V A+N VG G S E + E+ P P+ + + G + +
Sbjct: 725 TVSGLTPARTY----QFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQS 780
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
I V W P N G L G+ ++Y P E ++ N+ L+ L T+Y
Sbjct: 781 IMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYE 838
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++V AYN AG G S E T + P PP V ++ +N TT+ W F
Sbjct: 839 IQVAAYNGAGLGIFSRAVTEYTLQGVPTAPPQNVQMEAVNSTTIQFLWTPPPQQFINGIN 898
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
GYK+ W VD + TI P + + I +L Y VL F+ GDG S+P
Sbjct: 899 QGYKLLAWPVDVPEAITVVTIAPDFHGIHHGSITNLKKFTAYFTSVLCFTTPGDGPPSTP 958
Query: 586 AITF 589
+ +
Sbjct: 959 QLVW 962
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 33/366 (9%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V EV S +QW G+ PI ++ + R W S + +
Sbjct: 1481 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPKGEWQTYSSSI--------SHEAT 1532
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
A I L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1533 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1592
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------N 345
I W+P E N Y+I++R+ K+ + ++E + +
Sbjct: 1593 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGPEAKMLKSPSALRAELTAQSSFKMVNSS 1652
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + Y YEV + A N +G P S V +F E P +APQ V +++
Sbjct: 1653 STLTTYELTHLKKYRRYEVLMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVNPLSAS 1712
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G++I YW+ DN ET + + L TKY
Sbjct: 1713 QLEVTWDPPPPESQN--GNIQGYKIYYWEADNQNETEKMKVLFLPEPMVRLKNLTSHTKY 1770
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1771 LVSISAFNAAGDGPKSDPRQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGV 1827
Query: 526 IIGYKV 531
+ GY+V
Sbjct: 1828 LQGYRV 1833
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 965 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGKNDSRLTHTLN 1020
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y R +S+ +TY +V A +G G +S + P D P APS +
Sbjct: 1021 STTLEYKIRGLSSL-------TTYTIEVAAVTSVGSGLVTSSTISSGVPPDLP-GAPSNL 1072
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1073 VISNISPRSATLQFRPGYDGKTSISRWVVEGQVGAIGDEEEWVSLYEEENEPDAQTLEIP 1132
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1133 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVP 1192
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW D P ++ I L+ T+Y +++ A+N
Sbjct: 1193 LPDSQYNGNPESVGYRIKYWCPDLPASALAQVINDRLEREFTIEELEEWTEYELQMQAFN 1252
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
AG GP S RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1253 AAGSGPWSNVLRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1312
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S P I
Sbjct: 1313 RAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSLPLI 1365
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 185/460 (40%), Gaps = 47/460 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P + EV TS I W I Y+I R +S+ + +G V +
Sbjct: 1374 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLA-SSSPHTFTTVEVGATVRQ 1432
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+T + L+P S Y F++ A G+GEP + ++P P +
Sbjct: 1433 FTATE-------LIPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQA 1484
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
++ S+ + +P +P Y+ + R+ E+Q+ + +V F
Sbjct: 1485 EVTARSLQLQWVPGSDGASPIRYFTVQVRELPKGEWQTYSSSISHEATACIVERLRPF-- 1542
Query: 360 TEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
T Y+++++A ND+G SE + + +D+P P V + ++++ + W P
Sbjct: 1543 TSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPR--D 1600
Query: 419 ENIRGRLIGHRIKYWKE------DNPEETAV-----------------YYLSRTTRNWAL 455
E++ G L G+RI Y++E PE + S +T
Sbjct: 1601 ESLNGLLQGYRI-YYRELEYEAGSGPEAKMLKSPSALRAELTAQSSFKMVNSSSTLTTYE 1659
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ L+ +Y V + AYN GE P S AP P V + ++ + + VTW
Sbjct: 1660 LTHLKKYRRYEVLMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVNPLSASQLEVTWD 1719
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + I GYK+ WE D ++ + + + +L+ +Y + + AF+
Sbjct: 1720 PPPPESQNGNIQGYKIYYWEADNQNETEKMKVLFLPEPM-VRLKNLTSHTKYLVSISAFN 1778
Query: 576 NGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
GDG S P + G + G+P+ + STTL
Sbjct: 1779 AAGDGPKSDP----RQGRTHQAAPGAPSFLAFSEITSTTL 1814
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 187/448 (41%), Gaps = 55/448 (12%)
Query: 158 ECVVKSTVGK-ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHY 213
E ++VG + T +T+ PP LPG + + + SAT+Q+ G I+ +
Sbjct: 1040 EVAAVTSVGSGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRW 1099
Query: 214 KIIARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGN 266
+ + IG E V Y E + + L P++ Y F++ N
Sbjct: 1100 VVEGQVG-----------AIGDEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVN 1148
Query: 267 ELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYK 324
+G S S T P AP+ I L + W PLP + N ++ Y+
Sbjct: 1149 IVGPSPYSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYR 1208
Query: 325 I-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPE 377
I +W ++ + + R+ EF +TEYE+++QA N G GP
Sbjct: 1209 IKYWCPDLPASALAQVIND---------RLEREFTIEELEEWTEYELQMQAFNAAGSGPW 1259
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437
S V+ + E +P AP+ V + +ST I +TW + +N G ++G++I + +D
Sbjct: 1260 SNVLRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDL 1317
Query: 438 PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKP 496
E + + AL+ GL+ Y ++V+A+ G G P LERT AP P
Sbjct: 1318 DPEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSLPLILERTKDDAP-GP 1376
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNT 553
P + + T+V + W+ EEP I+GY++ S T + VG T
Sbjct: 1377 PVRLVFPEVRLTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGAT 1429
Query: 554 L-DADIVDLSPGKRYHMRVLAFSNGGDG 580
+ +L P Y R+ A + G G
Sbjct: 1430 VRQFTATELIPESAYIFRLSAKTRQGWG 1457
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P VQV + + T+QW +G P T Y I AR + W + K+
Sbjct: 1896 EGSPGSPRDVQVTK-SASELTLQWAEGRAGNTPTTGYVIEARPSDEGLW-----DMFVKD 1949
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++N L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1950 IPRSATSYTLSLDN-LRQGVTYEFRVVAVNEVGYGEPSSPSVAVSAQVEAPF 2000
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 213 SCPRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPF 272
Query: 76 IVLH-----------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
I L P+ +PP + +A + L C A + +++ W NGV
Sbjct: 273 IYLSIARDIGAPETTAPTIV--VPPGNRSVVAGSSEITLECIASARPVEELSVSWKRNGV 330
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
RI T ++ G L I+N + AD G Y C
Sbjct: 331 RI---------TSGLHSFGRRLTISNPTSADTGAYVC 358
>gi|300794021|ref|NP_001179364.1| neural cell adhesion molecule L1 precursor [Bos taurus]
gi|296471081|tpg|DAA13196.1| TPA: L1 cell adhesion molecule isoform 1 [Bos taurus]
Length = 1257
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 715 EKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 770
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ +P + NS+
Sbjct: 771 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSST 828
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + ++ + ++ GL+
Sbjct: 829 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSTILGGLR 886
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y+V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 887 PYSSYWVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 941
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 942 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 1001
Query: 580 G 580
G
Sbjct: 1002 G 1002
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 136/630 (21%), Positives = 243/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVAN 511
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 512 LQVKDATRIMQGPRSA-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 563
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 564 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS- 621
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 622 -DHHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 678
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 679 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITW 735
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 736 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 790 TVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 849
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + ++ ++P N + L P Y + V AF+ G G S
Sbjct: 850 VTYWWEGSQRKHNKRHVHKGHVVVP-ANATSTILGGLRPYSSYWVEVQAFNGRGLGPAS- 907
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 908 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 936
>gi|391347861|ref|XP_003748172.1| PREDICTED: LOW QUALITY PROTEIN: neuroglian-like [Metaseiulus
occidentalis]
Length = 1257
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 148/595 (24%), Positives = 256/595 (43%), Gaps = 54/595 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG--NIIG----SGGRRKIFENGNLLISPVSRDDSGIY 58
G + C APKP W K +I G +GGR K+ ++G+L I+ V D+G Y
Sbjct: 443 GSTAILKCRVFGAPKPTVKWIKTNAHSITGGRELTGGRYKVLDSGDLQINEVLVTDNGEY 502
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
+C A+N G + G L V ++ + RC+A + LD+ W
Sbjct: 503 TCQASNKFGDTSASGTLDV-----------KELXGGRGESAVFRCNAQADPTLDLTINWL 551
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
N I D E + I L IT D+G Y CV K+ + K + T+ V+
Sbjct: 552 FNDELI---DF-ERDPRMIKASDNSLTITRTLELDSGRYTCVAKTELDKDTASATLTVQD 607
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEV 237
P P V+V + +A ++W PI Y I T++ TW + ++ +
Sbjct: 608 VPNSPSIVKVT-CDQYTALVEWKPNGDRRAPILSYTIQYNTSFAPDTWEDAFANIPAPDT 666
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ + PW+ Y F+VIA N++G PS S + T P++ P ++ G
Sbjct: 667 ---------RFKVSMSPWANYTFRVIARNKIGPSPPSETSMRCTTAESIPHKNPDKVAGR 717
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK------NDTEFQSETLKEYGNVGIAVV 351
G + +L ISW P+P + NAP +Y++ +++K +++ + +E ++++ IA
Sbjct: 718 GTQKDNLVISWTPMPPIEHNAPGFFYRVKYKRKDTENTADESSWITEDIQDWRQGSIAKY 777
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTI-FSAEDMPQVAPQGVFSRGF-NSTAINV 409
+P + Y +KV+A N G V I +S ED P PQ G + +
Sbjct: 778 GMP---VFKPYRIKVEAHNRRGAAHTHAVEVIGYSGEDKPSEVPQEFRVVGVPDGKTAEL 834
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ E++ G G++I+ W + ++ + + + A+ +P+T YV+V
Sbjct: 835 RWRPVS--PESVNGHFKGYKIQTWTNEEGKDKMRELVVPSNQTHAVAKIFKPNTMNYVQV 892
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG--INPTTVHVTWRYVSPSFEEEPII 527
+N E ESE R++ P G + + +++ WR P +
Sbjct: 893 RVFNEQHESDESE---TRSFETPEGTPGPVASFDGFPMGSSGIYLIWR--KPLEPNGRLT 947
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLD--ADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + EV A P+ + L+ A + +L +Y + + A + G G
Sbjct: 948 GYHISYEEVRGTTLGAAVERSPINDPLETRAKLANLRSNTKYRITIKAATLKGKG 1002
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 122/611 (19%), Positives = 206/611 (33%), Gaps = 73/611 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTA 62
G + C P P+ W K G + + + R + G L+I +D G+Y CTA
Sbjct: 256 GKRHELHCIFGGTPLPQIRWTKKGTSSLENSNRVETVNYGKTLVIKSPDFEDEGVYECTA 315
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G +S + + Y+ + P K A + C+A + + W NG+
Sbjct: 316 SNGVGPPKSHSMNVKIKAAPYWVKAPEKKDAAEEETVTFECNATG--VPEPKLQWFVNGM 373
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
I +P + G L I D ++C + +G + ++ PP
Sbjct: 374 PIEKAPA----SPRRKLQGNFLTIERLEKKDTAVFQCNASNPLGYAFKDFYLNVLALPPS 429
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI--GKEVD- 238
+ A Q T I ++ W + H I G+E+
Sbjct: 430 I-----------IEAPEQVTQAVVGSTAILKCRVFGAPKPTVKWIKTNAHSITGGRELTG 478
Query: 239 -RYT--GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
RY + I VLV E+ A N+ G S + A R
Sbjct: 479 GRYKVLDSGDLQINEVLVT-DNGEYTCQASNKFGDTSASGTLDVKELXGGRGESAVFRCN 537
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
DL+I+W +F + D E +K N + + R
Sbjct: 538 AQADPTLDLTINW----------------LFNDELIDFERDPRMIKASDN-SLTITRT-L 579
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
E Y + D + + +D+P +P V TA+ V W P
Sbjct: 580 ELDSGRYTCVAKTELD-----KDTASATLTVQDVPN-SPSIVKVTCDQYTAL-VEWKP-- 630
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+ R ++ + I+Y P+ + + + V + P Y +V+A N
Sbjct: 631 --NGDRRAPILSYTIQYNTSFAPDTWEDAFANIPAPDTRFKVSMSPWANYTFRVIARNKI 688
Query: 476 GEGPESERYLERTYRKA-PQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P SE + T ++ P K P V +G + ++W + P P Y+V+
Sbjct: 689 GPSPPSETSMRCTTAESIPHKNPDKVAGRGTQKDNLVISWTPMPPIEHNAPGFFYRVKYK 748
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPG----------KRYHMRVLAFSNGGDGRMSS 584
D + + + I DI D G K Y ++V A + G +
Sbjct: 749 RKDTENTADESSWI------TEDIQDWRQGSIAKYGMPVFKPYRIKVEAHNRRGAAHTHA 802
Query: 585 PAITFQMGEEK 595
+ GE+K
Sbjct: 803 VEVIGYSGEDK 813
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 78/200 (39%), Gaps = 17/200 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIG--SGGRR--KIFENGNLLISPVSRDDSGIYSCTATNVHG 67
C E P+P++ W K+G + S +R K + G L+ + D G+Y C ATN +G
Sbjct: 56 CEAEGTPEPEYEWIKNGRVFDYVSYDKRISKQPKRGTLIFTKPDDVDEGLYQCKATNQYG 115
Query: 68 MDESKGRLIVLHGPS-YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
S + S + + +I + L L C + + W ++ GN
Sbjct: 116 TSVSNAVFLRKSELSNFADDKTQEIFVMEGEPLSLDCKP-PQGYPAPSVFWL---IQSGN 171
Query: 127 MDLNELETPNINID-GGLLEITNASFADA---GEYECVVKSTVG---KISTKTTVIVEGP 179
L + I D G L + AD+ Y C S KI K + VE P
Sbjct: 172 GALRSFNSSRITADPEGKLHFSQVLRADSLADAVYTCSATSHFRREYKIGNKVVLKVE-P 230
Query: 180 PGLPGGVQVVEVHKTSATIQ 199
G +V VH+ ++ Q
Sbjct: 231 KSSTGKTEVPPVHQYTSGPQ 250
>gi|2275260|gb|AAC47654.1| tractin [Hirudo medicinalis]
Length = 1880
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/610 (24%), Positives = 263/610 (43%), Gaps = 49/610 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG N + C+ APKP ++ +I SG R K+ +GNLL+S + DSG Y C A+
Sbjct: 444 EGKNTVVQCSVFGAPKPLVTCLRNDTVI-SGDRFKVDTHGNLLVSNLQLSDSGNYICFAS 502
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT--EELLDVAYIWTHNG 121
N G D LIV + + P + L C+A T EE ++ W +G
Sbjct: 503 NKFGNDSVGANLIVRRR-TEISRPPSDHVTTVGSEVVLHCNATTDPEEKNSLSVKWLKDG 561
Query: 122 VRIGNMDLNELETPNI-NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I E +P + + L I ++G Y C+ + + + ++V+G P
Sbjct: 562 EPI----TFEGSSPGVFDFRDNSLTIKKVEVKESGTYVCIASTDLDSDNITVELVVKGVP 617
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDR 239
P V+++ +K+ A I+WT G N PIT + + T+ + ++ +EH++
Sbjct: 618 DPPENVEILRCNKSMAVIEWTPGFDNHDPITGHYVYCNTSRDEPGVYHRNEHLVP----- 672
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGGGG 298
+ + AS L PW+ Y F V A N +G PS + + +TPA P P ++
Sbjct: 673 -SSKSSASFH--LRPWNNYTFHVKAINNIGMSGPSKFTTDFCSTPAHYPTMNPEKVCTES 729
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ G L I+WEP+ N P +Y + +R + E E ++ + + I +
Sbjct: 730 REPGQLVITWEPMGSNDLNGPGFHYLVGFRLVDQDE---ELVRAVHDWQTKELVIEGQDV 786
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG--FNSTAINVTWNPIEL 416
+ E+E+ VQA N VG FS++ P+VAP+ RG NS+ W+ ++
Sbjct: 787 FKEFEIYVQAANQVGKNTNVTKKRGFSSQGSPKVAPKNFKLRGDTLNSSTAVFEWDEVDD 846
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYL------------------SRTTRNWALIVG 458
E I+G G++I+YW+ NP++ + S+ + +++G
Sbjct: 847 DPELIQGFFRGYQIQYWRVSNPDDVRAQDVIVRPWNPCPPANRKRRSRSKNGNHDGVVIG 906
Query: 459 ----LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
L PD+ V+ N +G SE T+ P + K + + H+
Sbjct: 907 HVTNLWPDSMVKAAVLVLNGGKKGELSEPI---TFYVPEGVPSKVMEPKVMERGSDHIKV 963
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ P + + GY ++ + M + + ++ + L+ I+DL Y + +
Sbjct: 964 SWKPPLEKNGNLTGYLIQYKKAPPSMDQKKEILVKDPDQLEKKIMDLESNTSYLIYIYGT 1023
Query: 575 SNGGDGRMSS 584
+ G G S
Sbjct: 1024 TKAGAGEEQS 1033
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 14/170 (8%)
Query: 12 CNPEAAPKPKFVW---KKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYSCTATNVHG 67
C E P+P W K+ + R ++ + +L S VS D + C A+NVHG
Sbjct: 356 CGVEGIPRPTVEWMLNKRPLEDLPPNPRMRMNDERTVLTFSNVSSKDIQVIQCNASNVHG 415
Query: 68 MDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
+ L V P ++ LP + + +N ++CS V + N I
Sbjct: 416 YILANAYLNVFAEPPSFQDLPVSPMKLTEGKNTVVQCSVFGAPKPLVTCL--RNDTVISG 473
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ G LL ++N +D+G Y C + G S +IV
Sbjct: 474 DRF------KVDTHGNLL-VSNLQLSDSGNYICFASNKFGNDSVGANLIV 516
>gi|193788222|dbj|BAG53116.1| unnamed protein product [Homo sapiens]
Length = 699
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 145/279 (51%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSGMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>gi|296471082|tpg|DAA13197.1| TPA: L1 cell adhesion molecule isoform 2 [Bos taurus]
Length = 1253
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW 553
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 554 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLV 608
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 609 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 664
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 665 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 714
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 715 EKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 770
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ +P + NS+
Sbjct: 771 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSST 828
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + ++ + ++ GL+
Sbjct: 829 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSTILGGLR 886
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y+V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 887 PYSSYWVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 941
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 942 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 1001
Query: 580 G 580
G
Sbjct: 1002 G 1002
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 136/630 (21%), Positives = 243/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 405 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 451
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVAN 511
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 512 LQVKDATRIMQGPRSA-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 563
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 564 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS- 621
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 622 -DHHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 678
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 679 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITW 735
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 736 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 789
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 790 TVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 849
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + ++ ++P N + L P Y + V AF+ G G S
Sbjct: 850 VTYWWEGSQRKHNKRHVHKGHVVVP-ANATSTILGGLRPYSSYWVEVQAFNGRGLGPAS- 907
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 908 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 936
>gi|326674054|ref|XP_003200058.1| PREDICTED: Down syndrome cell adhesion molecule [Danio rerio]
Length = 2013
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 240/535 (44%), Gaps = 52/535 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNI---------IGSGGRRKIFENGNLLISPVSRDDS 55
G +VT+ C+ + P P VW + SG R ++ ENG+LLI V +D+
Sbjct: 697 GKSVTLNCSAKGNPIPTIVWNHSKGAGVPQFQPIALNSGSRVQLLENGSLLIKHVLEEDA 756
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C +N G D SK + + P+ P ++ C+AH E+ + V +
Sbjct: 757 GFYLCKVSNDVGADISKSMYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRW 816
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKT 172
I N D++ + + L+I + D+G + C+ ++ G+
Sbjct: 817 ---EKESHIINPDMSRYVVTVKEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGII 873
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+IV+ P P V++ EV + ++WT G PIT Y I + N +++W +
Sbjct: 874 QLIVQDRPD-PPEVEIREVKDRTIALRWTMGFDGNSPITGYDINYK-NKSASW---ASSQ 928
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP-------SPQYNTPAD 285
+ K+V +A+I L P STY ++ A N++G PS+ +P P D
Sbjct: 929 MTKDVSPQLN--QATIIE-LHPASTYNIRMFAKNQIGESRPSNELTITTDEAPPDGAPQD 985
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
+A S G + ++W+P + QN Y++ +R EF + +Y
Sbjct: 986 VQLEAISSQG--------IKVTWKPPHKHLQNGLIRSYQVCYR-----EFGTGGSPQYNT 1032
Query: 346 VG------IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
+ I + + + YT+YEV+VQA N G GP SE +TI + ED+P P+ V +
Sbjct: 1033 INVDTTGDIETLTLDNLKKYTQYEVRVQAANRAGMGPTSEEITITTLEDVPSRPPENVVT 1092
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
I+++W+ L +E + G L+G+R+ +W E TT+ + L
Sbjct: 1093 TATTPETISLSWS--ALPKEALNGMLLGYRVIFWANLPDGELGEIRNITTTKPSLELERL 1150
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ T Y ++V+A+ AG+G SE+ RT P PP+ V + V V+W
Sbjct: 1151 EKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVP-GPPAGVKAAASTSSVVFVSW 1204
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 160/646 (24%), Positives = 254/646 (39%), Gaps = 68/646 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGI 57
A G V I C + P W KDG I + I +L IS +S +G
Sbjct: 600 ASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSEIHNGS 659
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y+C A N E +LIV P ++E P +++ L CSA + + +W
Sbjct: 660 YTCIARNEAAAVEHSIQLIV-KVPPHFEVQPKDQDGIYGKSVTLNCSAKGNPIPTI--VW 716
Query: 118 THN---GV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
H+ GV + + LN + +G LL I + DAG Y C V + VG +K+
Sbjct: 717 NHSKGAGVPQFQPIALNSGSRVQLLENGSLL-IKHVLEEDAGFYLCKVSNDVGADISKSM 775
Query: 174 VIVEGPPGL----PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ P + P + + H T + A +PI + W
Sbjct: 776 YLTVKIPAMITSYPNTTRAEQGHMTEMSCT----AHGEKPI-------KVRWEK-----E 819
Query: 230 EHVIGKEVDRYT------GRKEASIENVL--VPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
H+I ++ RY G + S +L V + F IA N YGE
Sbjct: 820 SHIINPDMSRYVVTVKEVGDEVISTLQILHTVREDSGFFSCIAIN--SYGEDKGIIQLIV 877
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 341
P + R ++ D +I+ N+P Y I ++ K+ + S+ K
Sbjct: 878 QDRPDPPEVEIR------EVKDRTIALRWTMGFDGNSPITGYDINYKNKSASWASSQMTK 931
Query: 342 EYG---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
+ N + P+ + Y +++ A N +G S +TI + E P APQ V
Sbjct: 932 DVSPQLNQATIIELHPA----STYNIRMFAKNQIGESRPSNELTITTDEAPPDGAPQDVQ 987
Query: 399 SRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+S I VTW P +N IR + +R ++ +P+ + + +
Sbjct: 988 LEAISSQGIKVTWKPPHKHLQNGLIRSYQVCYR-EFGTGGSPQYNTINVDTTGDIETLTL 1046
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L+ T+Y V+V A N AG GP SE T P +PP V P T+ ++W
Sbjct: 1047 DNLKKYTQYEVRVQAANRAGMGPTSEEITITTLEDVPSRPPENVVTTATTPETISLSWSA 1106
Query: 517 VSPSFEEEPIIGYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ ++GY+V W D ++ + I +L+ + L Y ++VLAF
Sbjct: 1107 LPKEALNGMLLGYRVIFWANLPDGELGEIRN-ITTTKPSLELE--RLEKYTNYSIQVLAF 1163
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPA-LYSASTTLLLVMSSTL 619
+ GDG S T KE G PA + +A++T +V S L
Sbjct: 1164 TRAGDGVRSEQIYT----RTKEDVPGPPAGVKAAASTSSVVFVSWL 1205
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 211/525 (40%), Gaps = 67/525 (12%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVS-----RD 53
A +G + C K W+K+ +II R + E G+ +IS + R+
Sbjct: 794 AEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTVKEVGDEVISTLQILHTVRE 853
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTE--- 108
DSG +SC A N +G D+ +LIV P PP++ I R + LR + +
Sbjct: 854 DSGFFSCIAINSYGEDKGIIQLIVQDRPD-----PPEVEIREVKDRTIALRWTMGFDGNS 908
Query: 109 --ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
D+ Y + + + + +P +N ++E+ AS + + K+ +G
Sbjct: 909 PITGYDINY--KNKSASWASSQMTKDVSPQLN-QATIIELHPASTYNIRMF---AKNQIG 962
Query: 167 --KISTKTTVIV-EGPP-GLPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIART 219
+ S + T+ E PP G P VQ+ + + W NG I Y++ R
Sbjct: 963 ESRPSNELTITTDEAPPDGAPQDVQLEAISSQGIKVTWKPPHKHLQNGL-IRSYQVCYRE 1021
Query: 220 --NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
S +N VD TG E + L ++ YE +V A N G G P+S
Sbjct: 1022 FGTGGSPQYNT------INVDT-TGDIETLTLDNLKKYTQYEVRVQAANRAGMG-PTSEE 1073
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYK-IFWRKKNDTEFQ 336
T D P + P + +S+SW LP+E N + Y+ IFW D E
Sbjct: 1074 ITITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIFWANLPDGE-- 1131
Query: 337 SETLKEYGNVGIAVVRIPSEFY--YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
L E N+ + E YT Y ++V A G G SE + + ED+P P
Sbjct: 1132 ---LGEIRNITTTKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPG-PP 1187
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA--VYY--LSRTT 450
GV + S+ + V+W P + IR ++ Y + E A VY+ L+
Sbjct: 1188 AGVKAAASTSSVVFVSWLPPHKLNGIIRKYIVFCSNPYPTVISEFEAAPDVYFRRLTNLN 1247
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495
+NW +Y + V+A AG G SE KAP +
Sbjct: 1248 QNW----------QYSIWVVAVTAAGRGNTSEIITVEPQAKAPAR 1282
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P P++ W +D + + S R +G LLI D+G Y C N
Sbjct: 233 GHRVELPCKASGHPPPRYRWLRDNSPLESDSRYHQSVSG-LLIEATRPSDAGSYVCEVWN 291
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + GRL+V P P K+ + + L CS + D+ W N +I
Sbjct: 292 SFGNAKVVGRLVVKQ-PLKAVVSPRKVRGSVGSQVSLFCSVTGSDEFDIT--WYRNAEKI 348
Query: 125 G---NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
N+ + + N+ ++G + +D G Y+C ++ GK+ST+ V V G
Sbjct: 349 YQGINVRITGINNENLVMEG-------MAKSDGGAYQCFARN--GKMSTQDLVQVVLEDG 399
Query: 182 LP 183
P
Sbjct: 400 TP 401
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 12/185 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FENGNLLISPVSRDDSGIYSCTA 62
G V++FC+ + + W ++ I G +I N NL++ +++ D G Y C A
Sbjct: 322 GSQVSLFCSVTGSDEFDITWYRNAEKIYQGINVRITGINNENLVMEGMAKSDGGAYQCFA 381
Query: 63 TNVHGMDESKGRLIVLHG-PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N + ++++ G P K+ ++ + + L C L V + +
Sbjct: 382 RNGKMSTQDLVQVVLEDGTPKILSAFSEKV-VSPNEPISLVCHVKGTPLPTVTWTLDDDP 440
Query: 122 V-RIGNMDLNELETPNINIDGGLLEITNAS---FADAGEYECVVKSTVGKISTKTTVIVE 177
V + N ++ + I +G +L N S +D G Y C ++ G +S + + V
Sbjct: 441 VIKDSNHRMDRI----ITTEGHVLSYLNVSHTQVSDGGVYRCTCNNSAGSVSYQARINVR 496
Query: 178 GPPGL 182
GP +
Sbjct: 497 GPASI 501
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
++ + C P P W K N + GRR NG+ +I V +DSG Y C A
Sbjct: 1297 DIVLPCKAVGDPPPTIKWLKGNNGTPAPVSIDGRRSAHNNGSFVIRTVKAEDSGYYRCVA 1356
Query: 63 TNVHGMDE 70
+N G DE
Sbjct: 1357 SNNWGSDE 1364
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGN--IIGSGGR--RKIFENGNLL----ISPVSRDDSGIYS 59
+++ C+ + P P W D + I S R R I G++L +S D G+Y
Sbjct: 418 ISLVCHVKGTPLPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVSDGGVYR 477
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CT N G + R+ V GP+ + +T A R+ + C + +
Sbjct: 478 CTCNNSAGSVSYQARINV-RGPASIRPMK-NVTAIAGRDTYIHCRIIGYPYYSIKWYKDS 535
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC-VVKSTVGKISTKTTVIVEG 178
N + N E + G L+++N +D GEY C V+ +I V V+
Sbjct: 536 NLLPF-NHRQRAFE------NNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKV 588
Query: 179 PP 180
PP
Sbjct: 589 PP 590
>gi|296471083|tpg|DAA13198.1| TPA: L1 cell adhesion molecule isoform 3 [Bos taurus]
Length = 1248
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 259/601 (43%), Gaps = 58/601 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 433 AVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 492
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D+S ++ + + Q P + C A + L + W
Sbjct: 493 QAAN----DQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQASFDPSLQHSTTW 548
Query: 118 THNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
R +DL EL ++ I+ L I + ++D G Y CV + + + ++ ++V
Sbjct: 549 -----RRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLV 603
Query: 177 EGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFN 227
G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 604 VGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS---- 659
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
+GK + S L P+ Y F+V A N+ G GEPS S TP P
Sbjct: 660 -----LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAP 709
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNV 346
+ P + G G + ++ I+W+PL NAP + Y++ WR +K +Q + + +
Sbjct: 710 EKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSD---- 765
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
VV S F YE+KVQ +N G GPE ++ +S ED PQ +P + NS+
Sbjct: 766 PFLVVSNTSTF--VPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSST 823
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQ 460
+ V W ++ + ++G L G+ + YW E + + ++ + ++ GL+
Sbjct: 824 VLVRWQSVDPAQ--VKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSTILGGLR 881
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + Y+V+V A+N G GP S T P P A+H++ + T++ + W+ P
Sbjct: 882 PYSSYWVEVQAFNGRGLGPASGMTF-NTPEGVPGH-PEALHLECQSDTSLLLHWQ---PP 936
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
++ V ++ D S+ + +P ++ +LSP RY ++ A + G
Sbjct: 937 LSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGP 996
Query: 580 G 580
G
Sbjct: 997 G 997
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 136/630 (21%), Positives = 243/630 (38%), Gaps = 56/630 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + G+ + + +G L++S + D+ + C
Sbjct: 340 GPGETARLDCQVQGRPQPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQC 399
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y +LP KI + + T LL A+
Sbjct: 400 EARNRHG-------LLLANAYIYVVELPAKI-LTPDNETYMAVQGSTAYLLCKAF----- 446
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 447 GAPVPSVQWLDREGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAANDQSNVTIVAN 506
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K + + +T A+ + H T W ++ E +
Sbjct: 507 LQVKDATRIMQGPRSA-IEKRGSRVMFTCQASFDPSLQH-----STTWRRDALDLQE--L 558
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + D+Y E + + L + +A +L E + +P P S
Sbjct: 559 G-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVESRAELLVVGSPGPVPQLELS- 616
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P + NAP Y I + K + +L K GN ++
Sbjct: 617 -DHHLLKQSQVRLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 673
Query: 353 IPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG P + T+ + E P+ P V G + + +TW
Sbjct: 674 LSP---YVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVDVKGEGNETNNMVITW 730
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N +++Y + P++ + + + L+V Y +KV
Sbjct: 731 KPLRWMDWN------APQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQ 784
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
N+ G+GPE + + + PQ P +K +N +TV V W+ V P+ + + GY
Sbjct: 785 TVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTVLVRWQSVDPAQVKGHLRGYN 844
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + ++ ++P N + L P Y + V AF+ G G S
Sbjct: 845 VTYWWEGSQRKHNKRHVHKGHVVVP-ANATSTILGGLRPYSSYWVEVQAFNGRGLGPAS- 902
Query: 585 PAITFQMGEEKEFKSGSPALYSASTTLLLV 614
+TF E + L S T LL+
Sbjct: 903 -GMTFNTPEGVPGHPEALHLECQSDTSLLL 931
>gi|432847558|ref|XP_004066082.1| PREDICTED: protein sidekick-1-like [Oryzias latipes]
Length = 2122
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 153/595 (25%), Positives = 251/595 (42%), Gaps = 35/595 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
EG V C APKP W+K I+ SG R + ++G L I P+S DSG ++
Sbjct: 389 EGETVVFACEHSGAPKPAITWRKGLQIVASGSVQVPRFTLLQSGGLQIKPISFQDSGQFT 448
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CTA+N G + L V ++ P + L C+A + +++++ W
Sbjct: 449 CTASNSEGSINATAALTVWRR-TFLSVPPTDQRVIKGTTAVLECNATHDSRINISFKWDR 507
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
GV + + +++ G L I+ D G+Y C V S G S + V
Sbjct: 508 GGVPVLSSGGGR-----VSVSQGSLSISQTWSGDIGDYTCTVTSRAGNDSHTARLEVIEL 562
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + + S + W P HY + N NS W V EV
Sbjct: 563 PHSPRSLTARFNDSDSRSVLLSWLRPFDGNSPFLHYVLELSEN-NSPW-----KVYLSEV 616
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
D E S+ L P TY+F++ A N++G G+ S+ + + + P P I
Sbjct: 617 DPSV--TEVSVGG-LTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVAS 673
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R ++Q K + +
Sbjct: 674 GRTNQSIMVQWQPPPEPELNGVLRGYLLRYRLAGLPGDYQE---KNISSPETNYCLLKDL 730
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+Y+++V A G G S VT ++ + +P PQ V NST I TWNP
Sbjct: 731 IIWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVEVVAINSTTIRFTWNPPP- 789
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAYN 473
++ I G G+++ W E +PE+ ++ + R+ L+ GL+ T Y+ + +
Sbjct: 790 -QQFINGINQGYKLMVWPEQSPEDMKTVTITPDYPSLRHTGLVSGLKKFTWYFGSTLCFT 848
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G+GP S L +T+ P P + TTV V+W P + I GY +
Sbjct: 849 TPGDGPRSPPTLLQTHEDTP-GPVHQLTFTETLDTTVRVSW--AEPKEKNGIITGYTLW- 904
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV S + +P +TL + L+ +Y ++V A + G G ++S I+
Sbjct: 905 WEVPGVESSLVERSLP-NSTLQYQLTGLNSTTKYTIQVAALTAAGQGVVTSSTIS 958
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 24/373 (6%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-- 222
+ T +T+ PP LPG + + + AT+++ G I+ + + A+ +
Sbjct: 951 VVTSSTISTGVPPELPGAPSNLVISNISPRKATLKFRPGPDGKTTISRWIVEAQVREDGK 1010
Query: 223 -STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
TW V E + + I N L P++ Y F++ N +G S+PS
Sbjct: 1011 EDTWRVVYE-------ENHPDADTLEIPN-LTPFTQYRFRMQQVNIVGSSPMSAPSRLIQ 1062
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP--NIYYKI-FWRKKNDTEFQSE 338
T P PS + L SW+PLP + N+ + Y++ WR D + +
Sbjct: 1063 TLQAAPDTHPSNLRLVSATQTSLRFSWKPLPASEYNSSPETVGYRLRVWR--TDGQGKDR 1120
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
T G V + +T+Y ++VQ+ N +G GP S V +AE P +P V
Sbjct: 1121 TQDVQGGVNSTDATVDGLSPWTQYHIQVQSFNSIGAGPWSSTVEARTAESAPSGSPVNVT 1180
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
+ +S+ I +TW+ + + N G ++G+++ Y ++D +V + L+
Sbjct: 1181 AEAVSSSKIMLTWSALPQTQRN--GVILGYKVLYSEKDLEAPPSVLVVQGEGNLTVLLGA 1238
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
LQ T Y ++V+A+ G+GP S L RT P PP + + T+V V W+
Sbjct: 1239 LQKYTVYVLQVLAFTRIGDGPLSNPVLLRTKEDVP-GPPVRMLFPEVRLTSVRVVWQ--P 1295
Query: 519 PSFEEEPIIGYKV 531
P I+GY++
Sbjct: 1296 PGLPNGIILGYQI 1308
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 38/348 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVIGKEVDRYTGRKE 245
EV + W + P+ ++ + + N TW N+ +V VDR
Sbjct: 1384 EVEARRLHLYWGISGSGSSPLRYFTLQLKELPNGTWKTHTTNIPHNVTSWTVDR------ 1437
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+F+++A N++G S + T D P + P + +
Sbjct: 1438 ------LKPFTSYKFRMVATNDVGDSLFSKETDSVTTLQDVPNEPPVILSVKPTTTTSVL 1491
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKEYGNVGIAVVRIPSEF------ 357
I W+ E N Y++++R+ N++ F ++ N A++ S F
Sbjct: 1492 IHWKRPKEESINGVLAGYRLYYRELPANESSFPQAEVQTTKNTTSALIAAKSTFKTISSA 1551
Query: 358 -----------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+T Y++ + + N +G P S V + E P VAPQ + + T+
Sbjct: 1552 SLTEFELTQLKRFTRYQIVMTSYNIIGESPPSTAVDVSVGEAAPSVAPQSIKVSAVSPTS 1611
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ VTW+ L +N G + G++I YW+ D +T + + L T Y
Sbjct: 1612 LEVTWDMPPLETQN--GLIQGYKIHYWERDKQNQTEKVKVIFIPETRVHLHNLTSYTPYL 1669
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
V + A+N AG+GP S+ RT + AP + PS + + +V+V+W
Sbjct: 1670 VTLTAFNTAGDGPPSDPRGARTRQSAPSQ-PSFLSFSEVTGGSVNVSW 1716
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+ IP+ +T+Y ++Q +N VG P S + + + P P + T++
Sbjct: 1028 LEIPNLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSNLRLVSATQTSLRF 1087
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVK 468
+W P+ N +G+R++ W+ D + + + A + GL P T+Y+++
Sbjct: 1088 SWKPLPASEYNSSPETVGYRLRVWRTDGQGKDRTQDVQGGVNSTDATVDGLSPWTQYHIQ 1147
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V ++N+ G GP S RT AP P V + ++ + + +TW + + I+G
Sbjct: 1148 VQSFNSIGAGPWSSTVEARTAESAPSGSPVNVTAEAVSSSKIMLTWSALPQTQRNGVILG 1207
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D + + + GN L + L Y ++VLAF+ GDG +S+P +
Sbjct: 1208 YKVLYSEKDLEAPPSVLVVQGEGN-LTVLLGALQKYTVYVLQVLAFTRIGDGPLSNPVL 1265
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 13/334 (3%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L PW+ Y +V + N +G G P S + + T P +P + + ++W L
Sbjct: 1138 LSPWTQYHIQVQSFNSIGAG-PWSSTVEARTAESAPSGSPVNVTAEAVSSSKIMLTWSAL 1196
Query: 312 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
P+ ++N + YK+ + +K D E L G + V+ + + YT Y ++V A
Sbjct: 1197 PQTQRNGVILGYKVLYSEK-DLEAPPSVLVVQGEGNLTVL-LGALQKYTVYVLQVLAFTR 1254
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
+G GP S V + + ED+P + +F T++ V W P L I G I +R+
Sbjct: 1255 IGDGPLSNPVLLRTKEDVPGPPVRMLFPE-VRLTSVRVVWQPPGLPNGIILGYQISYRL- 1312
Query: 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
+P+ + R + + GL + Y + A G G E + T R+
Sbjct: 1313 --DRKDPQRWTTVEVGSNARQFT-VTGLLSEQTYVFHLTARTAVGWGERQEALVVTTERR 1369
Query: 492 APQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP 549
+PP A + +H+ W P+ + +++ E+ + + T IP
Sbjct: 1370 ERPQPPKKLAAPQDEVEARRLHLYWGISGSG--SSPLRYFTLQLKELPNGTWKTHTTNIP 1427
Query: 550 VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
N + L P Y R++A ++ GD S
Sbjct: 1428 -HNVTSWTVDRLKPFTSYKFRMVATNDVGDSLFS 1460
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 27/250 (10%)
Query: 359 YTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIEL 416
+T Y+ ++ A NDVG S E ++ + +D+P P + + +T++ + W P E
Sbjct: 1441 FTSYKFRMVATNDVGDSLFSKETDSVTTLQDVPNEPPVILSVKPTTTTSVLIHWKRPKE- 1499
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW--ALIVG---------------- 458
E+I G L G+R+ Y + E + +TT+N ALI
Sbjct: 1500 --ESINGVLAGYRLYYRELPANESSFPQAEVQTTKNTTSALIAAKSTFKTISSASLTEFE 1557
Query: 459 ---LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
L+ T+Y + + +YN GE P S AP P ++ + ++PT++ VTW
Sbjct: 1558 LTQLKRFTRYQIVMTSYNIIGESPPSTAVDVSVGEAAPSVAPQSIKVSAVSPTSLEVTWD 1617
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
+ I GYK+ WE D+ +I + T + +L+ Y + + AF+
Sbjct: 1618 MPPLETQNGLIQGYKIHYWERDKQNQTEKVKVIFIPET-RVHLHNLTSYTPYLVTLTAFN 1676
Query: 576 NGGDGRMSSP 585
GDG S P
Sbjct: 1677 TAGDGPPSDP 1686
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 160 VVKSTVGKISTKTTVIVEGPP-----------GLPGGVQVVEVHKTSA--TIQWTDGATN 206
++K S + I GPP G PG V + KTS+ T+ W++
Sbjct: 1763 LIKGATYTFSVQALTISYGPPVRANISAQPVKGSPGSPVEVSITKTSSALTLHWSEADNG 1822
Query: 207 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGN 266
P+T Y I AR++ W + H+ + R + L +YEF+VIA N
Sbjct: 1823 AAPVTGYVIEARSSDEGLWDSFIRHLPP------SSRSASVPLERLRSGISYEFRVIALN 1876
Query: 267 ELGYGEPSSPSPQYNTPADKPY 288
GYG+PS+PS +++P+
Sbjct: 1877 RFGYGQPSTPSAALAALSERPF 1898
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 8/179 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIY 58
+A NV I C P P+ W KD + + R ++ L + V D GI+
Sbjct: 293 FADLDKNVDIPCQASGVPPPRIEWYKDAVPLSKLANPRYRVNTATGLTVRRVQLGDGGIF 352
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A + G ++ L+V + P T+ + C A W
Sbjct: 353 QCFARSSAGETQAHTELLVSSVGPIFTFPPSDQTVTEGETVVFACEHSGAP--KPAITW- 409
Query: 119 HNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++I + ++ P + G L+I SF D+G++ C ++ G I+ + V
Sbjct: 410 RKGLQI--VASGSVQVPRFTLLQSGGLQIKPISFQDSGQFTCTASNSEGSINATAALTV 466
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 135/351 (38%), Gaps = 24/351 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ Y+ + + N +G PS+ + + P AP I L ++W+ P E
Sbjct: 1564 FTRYQIVMTSYNIIGESPPST-AVDVSVGEAAPSVAPQSIKVSAVSPTSLEVTWDMPPLE 1622
Query: 315 KQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
QN YKI +W + D + Q+E +K + V + + YT Y V + A N G
Sbjct: 1623 TQNGLIQGYKIHYWER--DKQNQTEKVKVI-FIPETRVHLHNLTSYTPYLVTLTAFNTAG 1679
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S+ + + P FS ++NV+W P I N G++ G+R+ Y
Sbjct: 1680 DGPPSDPRGARTRQSAPSQPSFLSFSE-VTGGSVNVSWGPP--ITPN--GQVEGYRVIYQ 1734
Query: 434 KE---DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
+ + + + W + L Y V A + P + +
Sbjct: 1735 PTAPVQGVSKVVTVDVKGSWQRWLKVRDLIKGATYTFSVQALTISYGPPVRANISAQPVK 1794
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII-- 548
+P P V + I T+ +T + P+ GY + D+ + D+ I
Sbjct: 1795 GSPGSP---VEVS-ITKTSSALTLHWSEADNGAAPVTGYVIEARSSDEGLW---DSFIRH 1847
Query: 549 --PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
P + + L G Y RV+A + G G+ S+P+ E+ F
Sbjct: 1848 LPPSSRSASVPLERLRSGISYEFRVIALNRFGYGQPSTPSAALAALSERPF 1898
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 19/178 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G+G + N WK+DG + +G + L+I D+G+Y C A
Sbjct: 209 GQGATLECIANARPVDGLMVSWKRDGRWLATGHQ--------LIIPSPVFSDTGLYVCEA 260
Query: 63 TNVHGMD---ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
+ E+K L V+ P Q KI +N+ + C A + W
Sbjct: 261 LLSNSTAKPVEAKAHLTVMEPPFLAVQPKGKIFADLDKNVDIPCQASGVPPPRIE--WYK 318
Query: 120 NGVRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ V L++L P ++ L + D G ++C +S+ G+ T ++V
Sbjct: 319 DAV-----PLSKLANPRYRVNTATGLTVRRVQLGDGGIFQCFARSSAGETQAHTELLV 371
>gi|149036849|gb|EDL91467.1| contactin 4, isoform CRA_b [Rattus norvegicus]
Length = 639
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 144/279 (51%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 356 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 415
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 416 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 474
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 475 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 534
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + VD G+
Sbjct: 535 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GK 589
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 590 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 628
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ +
Sbjct: 271 CKANGRPKPTYRWLKNGDPLLTRERIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIYA 329
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 330 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 382
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E I+ DG L I N + +DAG Y C+ + G S+ V+V+ P
Sbjct: 383 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDP 431
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR +G L I ++D+G Y C
Sbjct: 171 AEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SSGILEIPNFQQEDAGSYEC 229
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG++ P++ Q+ I +A ++ C A+ Y W N
Sbjct: 230 VAENSRGKNIAKGQVTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 286
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + L I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 287 GDPL-------LTRERIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIYASAELSVIAES 339
Query: 179 P 179
P
Sbjct: 340 P 340
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 36/244 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P DSG Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS---------AHTEELL 111
ATN G S+ +L + ++ + +++ + + L C E +
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKI 161
Query: 112 DVAYIWTHNGVRIGNMDLNELE----TPNI---NIDG-------------GLLEITNASF 151
+V + T + + L P I DG G+LEI N
Sbjct: 162 EVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKARRHKSSGILEIPNFQQ 221
Query: 152 ADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGRPI 210
DAG YECV +++ GK K V P VQ++ ++H + + NGRP
Sbjct: 222 EDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIINDIHVAMEESVFWECKANGRPK 278
Query: 211 THYK 214
Y+
Sbjct: 279 PTYR 282
>gi|157909805|ref|NP_766592.2| contactin-4 isoform 2 precursor [Mus musculus]
gi|157909814|ref|NP_001103221.1| contactin-4 isoform 2 precursor [Mus musculus]
Length = 705
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E I+ DG L I N + +DAG Y C+ + G S+ VIV+ P
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDP 497
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKARRHKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>gi|358419039|ref|XP_003584107.1| PREDICTED: protein sidekick-1 [Bos taurus]
Length = 2114
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 238/550 (43%), Gaps = 37/550 (6%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNV 65
+ C AP+P VW + +I+ SG R + E+G L I+PVS D+G Y+C A N
Sbjct: 405 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 464
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + S P + + L C A + + + Y+W + V I
Sbjct: 465 EGSLDASATLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 523
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
+ + + DG LL I+ D G+Y C V S G S + V P P
Sbjct: 524 PSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQN 579
Query: 186 V--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ + H + + W P+ +Y I+ + NS W V +G E+ T R
Sbjct: 580 LVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVR 637
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
L P TY+F+V A N++G G+ S+ + + P + P P I G
Sbjct: 638 G-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQS 690
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ + W+P P + N Y + +R E+Q + + ++ + +T+Y
Sbjct: 691 IMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNIS---SPEVSYCLVTELIIWTQY 747
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
E++V A N G G S VT ++ + +P PQ V NST I WNP ++ I
Sbjct: 748 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPP--QQFIN 805
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G G+++ W +D PE V ++ + I L+ T Y+ V+ + G+GP
Sbjct: 806 GINQGYKLLAWPDDVPEAVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPP 865
Query: 481 SERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-D 537
S L RT+ KP + H+ I T++ V+W+ P + I GY+V WEV
Sbjct: 866 STPQLIRTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQVS-WEVYG 919
Query: 538 QDMSRANDTI 547
Q SR T+
Sbjct: 920 QSTSRLTLTL 929
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 158/364 (43%), Gaps = 47/364 (12%)
Query: 180 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 233
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 341
+ + + W+P E N Y+I++R+ + +S+TLK
Sbjct: 1491 VSVTPRTTSSVRVQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550
Query: 342 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ V + E Y YEV + A N +G GP S V +F E P A
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQA 1610
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED---NPEETAVYYLSRTT 450
PQ V ++ + V W P +N G + G++I YW+ D + E+ V +L TT
Sbjct: 1611 PQRVHVNPLTASQLEVAWEPPPPESQN--GIIQGYKIYYWEADSQNDTEKMRVLFLPETT 1668
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
A + L TKY V + A+N AG+GP SE T++ AP PS + I TT+
Sbjct: 1669 ---AKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAPGT-PSFLAFSEITSTTL 1724
Query: 511 HVTW 514
+V+W
Sbjct: 1725 NVSW 1728
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP YT Y +++ N VG GP S+ + + + P VAP + R + T++
Sbjct: 1038 MLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLR 1097
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIKYW D P +S + GL+ T+Y ++
Sbjct: 1098 LRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLTQVISDRLEREFTVEGLEEWTEYELQ 1157
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP S RT P P V + ++ T + +TW V + I+G
Sbjct: 1158 MQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILG 1217
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D ++ +T A + L Y ++VLAF+ G+G S P I
Sbjct: 1218 YKILFRAKDLD-PEPRSHVVRGNHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSVPPI 1275
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 190/471 (40%), Gaps = 57/471 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1284 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1341
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR---IG 295
++T + L P S Y F++ A G+GEP + ++P AP R +
Sbjct: 1342 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP--APPRELQVP 1392
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
L + W +P +P Y+ + R+ ++Q+ + VV
Sbjct: 1393 QADVTARSLCLRW--VPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEATACVVERLR 1450
Query: 356 EFYYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
F T Y+++++A ND+G E+E VT +D+P P+ V ++++ V W
Sbjct: 1451 PF--TSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPRSVSVTPRTTSSVRVQWQ 1506
Query: 413 PIELIRENIRGRLIGHRIKYWK---EDNP---------------EETAVYYL----SRTT 450
P E++ G L G+RI Y + E P E TA S +T
Sbjct: 1507 PPR--DESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAELTAQSSFKTVNSSST 1564
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ L+ +Y V + AYN GEGP S AP + P VH+ + + +
Sbjct: 1565 ETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQAPQRVHVNPLTASQL 1624
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
V W P + I GYK+ WE D ++ + T A + +L+ +Y +
Sbjct: 1625 EVAWEPPPPESQNGIIQGYKIYYWEADSQNDTEKMRVLFLPET-TAKLKNLTSHTKYLVS 1683
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
+ AF+ GDG S P Q G + G+P+ + S + S+TL +
Sbjct: 1684 ISAFNAAGDGPRSEP----QPGCTHQAAPGTPSFLAFSE----ITSTTLNV 1726
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 645 YQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHN 704
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E +S ++ L+ L T+Y ++V AYN AG G
Sbjct: 705 --GVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAAYNGAGLGVF 762
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V ++ +N TT+ W F GYK+ W D
Sbjct: 763 SRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPDDVPE 822
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ TI P + + I +L Y VL F+ GDG S+P +
Sbjct: 823 AVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQL 870
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 139/353 (39%), Gaps = 34/353 (9%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE + A N +G G S+P + A P QAP R+ L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637
Query: 318 APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
YKI++ +NDTE F ET + N+ +T+Y V + A
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNLT----------SHTKYLVSISAF 1687
Query: 370 NDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHR 429
N G GP SE + + P FS ST +NV+W E + N G L G+R
Sbjct: 1688 NAAGDGPRSEPQPGCTHQAAPGTPSFLAFSE-ITSTTLNVSWG--EPVAAN--GVLQGYR 1742
Query: 430 IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK---YYVKVMAYNNAGEGPESERYLE 486
+ Y + + NW + ++ TK Y+ +V A A GPE L+
Sbjct: 1743 VVYEPLAPVQGVSKVVTVDVKGNWPRWLKVRDLTKGVTYFFRVQARTIA-YGPE----LQ 1797
Query: 487 RTYRKAPQK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545
P + P + + +T +T + P GY + D+ +
Sbjct: 1798 ANVTAGPAEGSPGSPRDVSVTKSTSELTLHWTEGRAGRTPTTGYVIEARPSDEGLWDMFA 1857
Query: 546 TIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
IP G T +D L G Y RV+A + G G SSP+ E F
Sbjct: 1858 KDIPRGATAYTVSLDQLRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 181/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P + V +TS ++W D NG P + Y+I W
Sbjct: 1068 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWCP 1124
Query: 224 TWFN-VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ V VI ++R E ++E L W+ YE ++ A N +G G P S + + T
Sbjct: 1125 DLPSAVLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRT 1177
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P QN + YKI +R K+ D E +S ++
Sbjct: 1178 RESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR 1237
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + + +D P + VF
Sbjct: 1238 --GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPE 1294
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1295 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQFT-ATEL 1348
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + + T + R+V
Sbjct: 1349 APESAYVFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELQVPQADVTARSLCLRWVPG 1408
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + +++ E+ + + + I + A +V+ L P Y +R+ A ++ G
Sbjct: 1409 SDGASPIRYFTLQLRELPRGQWQTYSSSI--SHEATACVVERLRPFTSYKLRLKATNDIG 1466
Query: 579 DGRMSS 584
D S+
Sbjct: 1467 DSDFSA 1472
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
NV I C P P W KD I R ++ G L + + +DSGI+ C A+N
Sbjct: 309 NVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASN 368
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTH 119
G ++ L V + + QLP T+ LRC + ++I
Sbjct: 369 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILAS 428
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I S DAG Y C ++ G + T+ V
Sbjct: 429 GSVRIPRFML---------LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTV 476
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+ WT+G P T Y I AR + W + K+
Sbjct: 1806 EGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAKD 1859
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1860 IPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 38/164 (23%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN----------- 64
+ P+P+ W +DG+ I R I L+I + D+G Y A N
Sbjct: 123 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 182
Query: 65 VH-------GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAY 115
VH GM E+ +IV +PP + +A L C A+ +++
Sbjct: 183 VHLSIARDTGMPEAVAPVIV---------VPPSNRSVVAGSSETTLECIANARPAEELSV 233
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
W NGVR+ T ++ G L I+N + +D G Y C
Sbjct: 234 TWKRNGVRV---------TTGLHGFGRRLTISNPTSSDTGVYIC 268
>gi|410989685|ref|XP_004001089.1| PREDICTED: neural cell adhesion molecule L1 [Felis catus]
Length = 1363
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 151/618 (24%), Positives = 260/618 (42%), Gaps = 76/618 (12%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 533 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFC 592
Query: 61 TATN------VHGMDESKGRLIVLHGP-SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
A N + + K + GP S E+ K+T C A + L
Sbjct: 593 QAANDQNNVTIVANLQVKDATQITQGPQSAIEKKGSKVTFT--------CQASFDPSLQH 644
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
+ W +G + ++ I+ GLL I + ++D G Y CV + + + ++
Sbjct: 645 SITWRGDGRNLQESGDDD----KYFIEDGLLVIHSLDYSDQGNYSCVAGTELDIVESRAE 700
Query: 174 VIVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNST 224
++V G PG +++ + H ++ + W + PI Y I +A W S
Sbjct: 701 LLVVGSPGPVPQLELSDRHLLKQSQVRLSWRPAEDHNAPIEKYDIEFEDKEMAPEKWYS- 759
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 760 --------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGSGEPSPASETVVTPE 806
Query: 285 DK----------------PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR 328
P + P + G G + ++ I+W+PL NAP + Y++ WR
Sbjct: 807 AASAGAHGFDVLTHYFPAPEKNPVDVKGEGNETSNMVITWKPLRWMDWNAPQVQYRVQWR 866
Query: 329 KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
+ E + V + + + + YE+KVQA+N G GPE ++ +S ED
Sbjct: 867 PQGTRGAWQEQI-----VSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGED 921
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
P+ +P+ + NS+A+ V W P++ + ++G L G+ + YW E + + + ++ +
Sbjct: 922 YPEASPELEGIKILNSSAVLVRWWPVDPAQ--VKGHLRGYNVTYWWEGSQRKHSKRHVHK 979
Query: 449 ------TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
A++ GL+P + Y+++V A+N G GP SE T P P A+H+
Sbjct: 980 GHVVVPANTTSAVLGGLRPYSSYHLEVQAFNGRGLGPASEMTFS-TPEGVPGH-PEALHV 1037
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562
+ + T++ + W+ P + GY + +D +P ++ +LS
Sbjct: 1038 ECQSDTSLLLHWQ--PPLSHNGVLTGYVLSYHPLDDGDKEQLSFDLPDPELRMHNLTNLS 1095
Query: 563 PGKRYHMRVLAFSNGGDG 580
P RY ++ A + G G
Sbjct: 1096 PHLRYRFQLQATTKEGPG 1113
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 138/625 (22%), Positives = 232/625 (37%), Gaps = 72/625 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S + D+ + C
Sbjct: 440 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNMQPSDTMVTQC 499
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + + T LL A+
Sbjct: 500 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYMAVEGSTAYLLCKAF----- 546
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 547 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQTNDTGHYFCQAANDQNNVTIVAN 606
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G Q + K + + +T A+ + H W N+ E
Sbjct: 607 LQVKDATQITQGPQSA-IEKKGSKVTFTCQASFDPSLQH-----SITWRGDGRNLQE--- 657
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + + L + +AG EL E + +P P S
Sbjct: 658 SGDDDKYFIEDGLLVIHSLDYSDQGNYSCVAGTELDIVESRAELLVVGSPGPVPQLELS- 716
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E NAP Y I + K + +L K GN ++
Sbjct: 717 -DRHLLKQSQVRLSWRPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLK 773
Query: 353 IPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDM--------------PQVAPQ 395
+ Y Y +V AIN G P P SE V A P+ P
Sbjct: 774 LSP---YVHYTFRVTAINKYGSGEPSPASETVVTPEAASAGAHGFDVLTHYFPAPEKNPV 830
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL 455
V G ++ + +TW P+ + N +++Y + P+ T + + + L
Sbjct: 831 DVKGEGNETSNMVITWKPLRWMDWN------APQVQYRVQWRPQGTRGAWQEQIVSDPFL 884
Query: 456 IVG-LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+V Y +KV A N+ G+GPE + + + P+ P IK +N + V V W
Sbjct: 885 VVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGEDYPEASPELEGIKILNSSAVLVRW 944
Query: 515 RYVSPSFEEEPIIGYKVRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568
V P+ + + GY V W + + ++P NT A + L P YH
Sbjct: 945 WPVDPAQVKGHLRGYNVTYWWEGSQRKHSKRHVHKGHVVVP-ANTTSAVLGGLRPYSSYH 1003
Query: 569 MRVLAFSNGGDGRMSSPAITFQMGE 593
+ V AF+ G G S +TF E
Sbjct: 1004 LEVQAFNGRGLGPASE--MTFSTPE 1026
>gi|297490638|ref|XP_002698210.1| PREDICTED: protein sidekick-1 [Bos taurus]
gi|296473045|tpg|DAA15160.1| TPA: sidekick homolog 1, cell adhesion molecule (chicken) [Bos
taurus]
Length = 2194
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 238/550 (43%), Gaps = 37/550 (6%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNV 65
+ C AP+P VW + +I+ SG R + E+G L I+PVS D+G Y+C A N
Sbjct: 405 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 464
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + S P + + L C A + + + Y+W + V I
Sbjct: 465 EGSLDASATLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 523
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
+ + + DG LL I+ D G+Y C V S G S + V P P
Sbjct: 524 PSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQN 579
Query: 186 V--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ + H + + W P+ +Y I+ + NS W V +G E+ T R
Sbjct: 580 LVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVR 637
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
L P TY+F+V A N++G G+ S+ + + P + P P I G
Sbjct: 638 G-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQS 690
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ + W+P P + N Y + +R E+Q + + ++ + +T+Y
Sbjct: 691 IMVQWQPPPEPEHNGVLRGYILRYRLAGLPGEYQQRNIS---SPEVSYCLVTELIIWTQY 747
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
E++V A N G G S VT ++ + +P PQ V NST I WNP ++ I
Sbjct: 748 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPP--QQFIN 805
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G G+++ W +D PE V ++ + I L+ T Y+ V+ + G+GP
Sbjct: 806 GINQGYKLLAWPDDVPEAVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPP 865
Query: 481 SERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV-D 537
S L RT+ KP + H+ I T++ V+W+ P + I GY+V WEV
Sbjct: 866 STPQLIRTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQVS-WEVYG 919
Query: 538 QDMSRANDTI 547
Q SR T+
Sbjct: 920 QSTSRLTLTL 929
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 158/364 (43%), Gaps = 47/364 (12%)
Query: 180 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 233
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1383 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1442
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1443 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1490
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 341
+ + I W+P E N Y+I++R+ + +S+TLK
Sbjct: 1491 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1550
Query: 342 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ V + E Y YEV + A N +G GP S V +F E P A
Sbjct: 1551 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQA 1610
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED---NPEETAVYYLSRTT 450
PQ V ++ + V W P +N G + G++I YW+ D + E+ V +L TT
Sbjct: 1611 PQRVHVNPLTASQLEVAWEPPPPESQN--GIIQGYKIYYWEADSQNDTEKMRVLFLPETT 1668
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
A + L TKY V + A+N AG+GP SE T++ AP PS + I TT+
Sbjct: 1669 ---AKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAPGT-PSFLAFSEITSTTL 1724
Query: 511 HVTW 514
+V+W
Sbjct: 1725 NVSW 1728
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP YT Y +++ N VG GP S+ + + + P VAP + R + T++
Sbjct: 1038 MLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLR 1097
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIKYW D P +S + GL+ T+Y ++
Sbjct: 1098 LRWVPLPDSQYNGNPESVGYRIKYWCPDLPSAVLTQVISDRLEREFTVEGLEEWTEYELQ 1157
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP S RT P P V + ++ T + +TW V + I+G
Sbjct: 1158 MQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILG 1217
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D ++ +T A + L Y ++VLAF+ G+G S P I
Sbjct: 1218 YKILFRAKDLD-PEPRSHVVRGNHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSVPPI 1275
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 190/471 (40%), Gaps = 57/471 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1284 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1341
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR---IG 295
++T + L P S Y F++ A G+GEP + ++P AP R +
Sbjct: 1342 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP--APPRELQVP 1392
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
L + W +P +P Y+ + R+ ++Q+ + VV
Sbjct: 1393 QADVTARSLCLRW--VPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEATACVVERLR 1450
Query: 356 EFYYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
F T Y+++++A ND+G E+E VT +D+P P+ V ++++ + W
Sbjct: 1451 PF--TSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPRSVSVTPRTTSSVLIQWQ 1506
Query: 413 PIELIRENIRGRLIGHRIKYWK---EDNP---------------EETAVYYL----SRTT 450
P E++ G L G+RI Y + E P E TA S +T
Sbjct: 1507 PPR--DESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAELTAQSSFKTVNSSST 1564
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ L+ +Y V + AYN GEGP S AP + P VH+ + + +
Sbjct: 1565 ETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAAPAQAPQRVHVNPLTASQL 1624
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
V W P + I GYK+ WE D ++ + T A + +L+ +Y +
Sbjct: 1625 EVAWEPPPPESQNGIIQGYKIYYWEADSQNDTEKMRVLFLPET-TAKLKNLTSHTKYLVS 1683
Query: 571 VLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
+ AF+ GDG S P Q G + G+P+ + S + S+TL +
Sbjct: 1684 ISAFNAAGDGPRSEP----QPGCTHQAAPGTPSFLAFSE----ITSTTLNV 1726
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 645 YQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHN 704
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E +S ++ L+ L T+Y ++V AYN AG G
Sbjct: 705 --GVLRGYILRYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAAYNGAGLGVF 762
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V ++ +N TT+ W F GYK+ W D
Sbjct: 763 SRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPDDVPE 822
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ TI P + + I +L Y VL F+ GDG S+P +
Sbjct: 823 AVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQL 870
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 139/353 (39%), Gaps = 34/353 (9%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE + A N +G G S+P + A P QAP R+ L ++WEP P E QN
Sbjct: 1579 YEVVLTAYNVIGEGPASAPVEVFVGEA-APAQAPQRVHVNPLTASQLEVAWEPPPPESQN 1637
Query: 318 APNIYYKIFW---RKKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
YKI++ +NDTE F ET + N+ +T+Y V + A
Sbjct: 1638 GIIQGYKIYYWEADSQNDTEKMRVLFLPETTAKLKNLT----------SHTKYLVSISAF 1687
Query: 370 NDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHR 429
N G GP SE + + P FS ST +NV+W E + N G L G+R
Sbjct: 1688 NAAGDGPRSEPQPGCTHQAAPGTPSFLAFSE-ITSTTLNVSWG--EPVAAN--GVLQGYR 1742
Query: 430 IKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK---YYVKVMAYNNAGEGPESERYLE 486
+ Y + + NW + ++ TK Y+ +V A A GPE L+
Sbjct: 1743 VVYEPLAPVQGVSKVVTVDVKGNWPRWLKVRDLTKGVTYFFRVQARTIA-YGPE----LQ 1797
Query: 487 RTYRKAPQK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545
P + P + + +T +T + P GY + D+ +
Sbjct: 1798 ANVTAGPAEGSPGSPRDVSVTKSTSELTLHWTEGRAGRTPTTGYVIEARPSDEGLWDMFA 1857
Query: 546 TIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
IP G T +D L G Y RV+A + G G SSP+ E F
Sbjct: 1858 KDIPRGATAYTVSLDQLRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 181/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P + V +TS ++W D NG P + Y+I W
Sbjct: 1068 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWCP 1124
Query: 224 TWFN-VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ V VI ++R E ++E L W+ YE ++ A N +G G P S + + T
Sbjct: 1125 DLPSAVLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRT 1177
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P QN + YKI +R K+ D E +S ++
Sbjct: 1178 RESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR 1237
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + + +D P + VF
Sbjct: 1238 --GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPE 1294
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1295 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQFT-ATEL 1348
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + + T + R+V
Sbjct: 1349 APESAYVFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELQVPQADVTARSLCLRWVPG 1408
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + +++ E+ + + + I + A +V+ L P Y +R+ A ++ G
Sbjct: 1409 SDGASPIRYFTLQLRELPRGQWQTYSSSI--SHEATACVVERLRPFTSYKLRLKATNDIG 1466
Query: 579 DGRMSS 584
D S+
Sbjct: 1467 DSDFSA 1472
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
NV I C P P W KD I R ++ G L + + +DSGI+ C A+N
Sbjct: 309 NVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASN 368
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTH 119
G ++ L V + + QLP T+ LRC + ++I
Sbjct: 369 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILAS 428
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I S DAG Y C ++ G + T+ V
Sbjct: 429 GSVRIPRFML---------LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASATLTV 476
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+ WT+G P T Y I AR + W + K+
Sbjct: 1806 EGSPGSPRDVSVTK-STSELTLHWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAKD 1859
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1860 IPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 1910
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 38/164 (23%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN----------- 64
+ P+P+ W +DG+ I R I L+I + D+G Y A N
Sbjct: 123 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 182
Query: 65 VH-------GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAY 115
VH GM E+ +IV +PP + +A L C A+ +++
Sbjct: 183 VHLSIARDTGMPEAVAPVIV---------VPPSNRSVVAGSSETTLECIANARPAEELSV 233
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
W NGVR+ T ++ G L I+N + +D G Y C
Sbjct: 234 TWKRNGVRV---------TTGLHGFGRRLTISNPTSSDTGVYIC 268
>gi|345801458|ref|XP_547004.3| PREDICTED: protein sidekick-1 [Canis lupus familiaris]
Length = 2114
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 254/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G T+ C APKP W++ +I+ SG R + E+G L I+PVS D+G Y+
Sbjct: 397 DGMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVSIQDAGNYT 456
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + L V + ++ P + LRC A + + + Y+W
Sbjct: 457 CYAANMEGSLNASAALTVWNR-TFIINPPEDRVVIKGTTATLRCGATHDPRITLRYVWKK 515
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 516 DNTVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRTARLEVIEL 571
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W P+ +Y I+ + NS W V +G E+
Sbjct: 572 PHSPQNLLATLNSSHSHTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEM 629
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T R L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 630 TGITVRG-------LTPARTYQFRVCAVNQVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 682
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 683 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTEL 739
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V NST I WNP
Sbjct: 740 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQMEAVNSTTIQFLWNPPP- 798
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W + PE T V ++ + I L+ T Y+ V+ +
Sbjct: 799 -QQFINGINQGYKLLAWPAEVPEATTVVTIAPDFHGVHHGYITNLKKFTAYFASVLCFTT 857
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY+V
Sbjct: 858 PGDGPPSTPQLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQVS 912
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G +S I+
Sbjct: 913 -WEVYGRNGSRLTHTL--SNTTHEYKIKGLSSLTTYTIDVAAVTTAGAGLATSSTIS 966
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 177/416 (42%), Gaps = 55/416 (13%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S V+R
Sbjct: 1393 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACAVER------ 1446
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + S+ + T D P + PS I +
Sbjct: 1447 ------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSFISVTPHTTSSVL 1500
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 349
I W P E N Y+I++R+ + S+TLK + V +
Sbjct: 1501 IQWRPPRDESLNGLLQGYRIYYRELESEASAATVSKTLKTPSALRAELTAQSSFKTVNSS 1560
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ + ++
Sbjct: 1561 STLTTYELTHLKKYRRYEVILTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTAS 1620
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G+++ YW+ ++ ET + + L T+Y
Sbjct: 1621 QLEVTWDPPPPESQN--GNIQGYKVYYWEAESQNETEKMKVLFLPETMVKLKNLTSHTQY 1678
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1679 LVSISAFNAAGDGPQSDPRQGRTHQAAPGT-PSFLAFSEITSTTLNVSWG--EPAAANGV 1735
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD--------IVDLSPGKRYHMRVLA 573
+ GY+V V+E + + + T+D + + DL+ G Y RV A
Sbjct: 1736 LQGYRV-VYEPLAPVQGVSKVV-----TVDVNGNWQRWLKVRDLTKGVTYFFRVQA 1785
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 189/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 959 LATSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1014
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1015 -------AIGDEEEWVSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIVGSSPVSQSS 1067
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1068 RVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRP----D 1123
Query: 335 FQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAED 388
Q+ +L + N R+ EF +TEYE+++QA N +G GP S V + E
Sbjct: 1124 LQAPSLTQVIND-----RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSVAVRGRTRES 1178
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G+++ + +D E + +
Sbjct: 1179 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLFRAKDLDPEPRSHVVRG 1236
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P S LERT AP PP + +
Sbjct: 1237 NHSQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLILERTKDDAP-GPPVRLVFPEVRL 1295
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ +L+P
Sbjct: 1296 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPNTFTTVEVGATVRQFTATELAP 1348
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1349 ESAYVFRLSAKTRQGWG 1365
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y++ +W N S H +
Sbjct: 873 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQV----SWEVYGRNGSRLTHTLS 928
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A G G +S + P + P APS +
Sbjct: 929 NTTHEYKIKGLSSL-------TTYTIDVAAVTTAGAGLATSSTISSGVPPELP-GAPSNL 980
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 981 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVSLYEEENEPDAQTLEIP 1040
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VG P S+ + + + P VAP V R + T++ + W P
Sbjct: 1041 NLTPYTHYRFRMRQVNIVGSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1100
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D + ++ I GL+ T+Y +++ A+N
Sbjct: 1101 LPDSQYNGNPESVGYRIKYWRPDLQAPSLTQVINDRLEREFTIEGLEEWTEYELQMQAFN 1160
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP S RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 1161 AIGAGPWSVAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLF 1220
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ ++ A + L Y ++VLAF+ G+G SSP I
Sbjct: 1221 RAKDLD-PEPRSHVVRGNHSQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLI 1273
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 189/463 (40%), Gaps = 53/463 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1282 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1339
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1340 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1391
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1392 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACAVERLRP-- 1449
Query: 358 YYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T Y+++++A ND+G +E + + +D+P P + ++++ + W P
Sbjct: 1450 -FTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSFISVTPHTTSSVLIQWRPPR- 1507
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI-------------------- 456
E++ G L G+RI Y++E E +A +S+T + + +
Sbjct: 1508 -DESLNGLLQGYRI-YYRELESEASAAT-VSKTLKTPSALRAELTAQSSFKTVNSSSTLT 1564
Query: 457 ----VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
L+ +Y V + AYN GE P S AP P + + + + + V
Sbjct: 1565 TYELTHLKKYRRYEVILTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEV 1624
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYKV WE + ++ + T+ + +L+ +Y + +
Sbjct: 1625 TWDPPPPESQNGNIQGYKVYYWEAESQNETEKMKVLFLPETM-VKLKNLTSHTQYLVSIS 1683
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
AF+ GDG S P + G + G+P+ + STTL
Sbjct: 1684 AFNAAGDGPQSDP----RQGRTHQAAPGTPSFLAFSEITSTTL 1722
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 198/467 (42%), Gaps = 36/467 (7%)
Query: 160 VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYK 214
+V S+ S++ ++ PP + P V V +TS ++W D NG P + Y+
Sbjct: 1057 IVGSSPVSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYR 1116
Query: 215 IIARTNWNSTWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273
I W S VI ++R E +IE L W+ YE ++ A N +G G P
Sbjct: 1117 I---KYWRPDLQAPSLTQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-P 1166
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-D 332
S + + T P AP + + ++W +P + QN + YK+ +R K+ D
Sbjct: 1167 WSVAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLFRAKDLD 1226
Query: 333 TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQ 391
E +S ++ GN + + + + YE++V A +G G P S ++ + +D P
Sbjct: 1227 PEPRSHVVR--GNHSQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSSPLILERTKDDAPG 1283
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTT 450
+ VF T++ + W P E G ++G++I Y +P + T
Sbjct: 1284 PPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPNTFTTVEVGATV 1338
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
R + L P++ Y ++ A G G E + T ++ PP + + T
Sbjct: 1339 RQFT-ATELAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTAR 1397
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570
+ ++V S PI + V+V E+ + + + I T A + L P Y +R
Sbjct: 1398 SLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACA-VERLRPFTSYKLR 1456
Query: 571 VLAFSNGGDGRMSS---PAITFQ--MGEEKEFKSGSPALYSASTTLL 612
+ A ++ GD S+ T Q GE F S +P ++ S+ L+
Sbjct: 1457 LKATNDIGDSDFSAETDAVTTLQDVPGEPPSFISVTP--HTTSSVLI 1501
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 67/176 (38%), Gaps = 16/176 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 308 VDIVCRAMGVPLPTLQWYKDAISISKLQNPRYKMLSSGGLRIQKLRPEDSGIFQCFASNE 367
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHN 120
G ++ L V + + QLP T+ LRC + +I
Sbjct: 368 GGEIQTYTYLDVTNVAPAFTQLPVDTTVTDGMTATLRCEVSGAPKPAITWRRGKHILASG 427
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I S DAG Y C + G ++ + V
Sbjct: 428 SVRIPRFML---------LESGGLQIAPVSIQDAGNYTCYAANMEGSLNASAALTV 474
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1804 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1857
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS +T + P+
Sbjct: 1858 IPRSATSYSVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSMAVSTQVETPF 1908
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 26/196 (13%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N + L
Sbjct: 121 SCPRPQVTWFREGHKIIPSHRIAITLENQLVILATTAGDTGAYYAQAVNERNGENKTSPL 180
Query: 76 IVL---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
I L E + P I +A + L C A+ + ++ W NGVRI
Sbjct: 181 IHLSIARDVGTPETMAPVIVVPPGNRSVVAGSSEITLECIANARPIQELHVNWKRNGVRI 240
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
++ G L I+N + AD G Y C + ST + K + + PP
Sbjct: 241 SG---------GLHSFGRHLTISNPTSADTGLYVCEATLSGSTFDAATAKAFLSIIEPPY 291
Query: 182 L---PGGVQVVEVHKT 194
P +VEV +T
Sbjct: 292 FTAEPESRILVEVEET 307
>gi|148666978|gb|EDK99394.1| contactin 4 [Mus musculus]
Length = 639
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 356 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 415
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 416 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 474
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 475 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 534
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 535 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 589
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 590 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 628
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 171 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 229
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 230 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 286
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 287 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 339
Query: 179 P 179
P
Sbjct: 340 P 340
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 271 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 329
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 330 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 382
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E I+ DG L I N + +DAG Y C+ + G S+ V+V+ P
Sbjct: 383 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDP 431
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 38/245 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS---------AHTEELL 111
ATN G S+ +L + ++ + +++ + + L C E +
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGGVMGEYEPKI 161
Query: 112 DVAY---IWTHNGVRIGNMDLNELETPNINI-----DG-------------GLLEITNAS 150
+V + + G + ++ L P I DG G+LEI N
Sbjct: 162 EVQFPETVPAEKGTTV-KLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQ 220
Query: 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGRP 209
DAG YECV +++ GK K + P VQ++ ++H + + NGRP
Sbjct: 221 QEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGRP 277
Query: 210 ITHYK 214
Y+
Sbjct: 278 KPTYR 282
>gi|109732265|gb|AAI15767.1| Contactin 4 [Mus musculus]
Length = 705
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E I+ DG L I N + +DAG Y C+ + G S+ V+V+ P
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDP 497
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKARRHKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>gi|395818872|ref|XP_003782836.1| PREDICTED: neuronal cell adhesion molecule [Otolemur garnettii]
Length = 1285
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 157/602 (26%), Positives = 254/602 (42%), Gaps = 67/602 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS R I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGTK--GSALREDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L + W + + + D
Sbjct: 534 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSTVSFECKVKHDHTLTLTVTWLKDNGELPDDD 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
I+ L I + + D+G Y CV +T+ +S + V P
Sbjct: 593 -------RFTIEKDHLVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E V G +
Sbjct: 646 VPNPPFDLELTNQLDKSVQLSWTPGDDNNSPITKFIIEYEDTMHGAGVWHHHTE-VPGTQ 704
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
T + + S + T + +A L +P + P+ + G
Sbjct: 705 T---TAQLKLSPKVFHSLQKTKAYTCVAALLL-----------------EPDKNPTAVEG 744
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 745 LGTEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 801
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE VV S ED+P VAP V NST V W+P+
Sbjct: 802 TF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVHVSVVNSTLAEVHWDPVP 859
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 860 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 917
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 918 RVVNGKGEGPASADSVFNTPEGVPSAPKS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 974
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 975 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1033
Query: 587 IT 588
+T
Sbjct: 1034 VT 1035
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 122/611 (19%), Positives = 221/611 (36%), Gaps = 78/611 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPVEISPEDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFINVLAEPPRI--LTPTNTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + E I + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGTKGSAL-------REDIYILHENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P ++++ A +Q + + H + T TW + + +
Sbjct: 543 KDP------TRIIK-QPEYAVVQRGSTVSFECKVKHDHTLTLT---VTWLKDNGEL--PD 590
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
DR+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 591 DDRFTIEKDHLVIADVTDDDSGTYTCVANTTLDNVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY--- 343
P + + +SW P + N+P + I + DT + +
Sbjct: 648 --NPPFDLELTNQLDKSVQLSW--TPGDDNNSPITKFIIEYE---DTMHGAGVWHHHTEV 700
Query: 344 -GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
G A +++ + +++ + K V E P P V G
Sbjct: 701 PGTQTTAQLKLSPKVFHSLQKTKAYT-----------CVAALLLE--PDKNPTAVEGLGT 747
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 748 EPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTF 803
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y +KV A N+ G PE + + P P VH+ +N T V W V
Sbjct: 804 VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVHVSVVNSTLAEVHWDPVPLKSI 863
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFSN 576
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 864 RGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNG 922
Query: 577 GGDGRMSSPAI 587
G+G S+ ++
Sbjct: 923 KGEGPASADSV 933
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 13/179 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + K F+ L I+ VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIHWIKEDGTLPVNRMSYKNFKK-TLQITHVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 344 NALGAIHHTISVTVKAAP-YWIMAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGVP 400
Query: 124 IGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ E+ E P+ IDG + +N + Y+C + G + + V P
Sbjct: 401 V------EISPEDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFINVLAEP 453
>gi|37537817|sp|Q90478.1|L1CA1_DANRE RecName: Full=Neural cell adhesion molecule L1.1; Short=N-CAM-L1.1;
Short=NCAM-L1.1
gi|1065714|emb|CAA61490.1| adhesion molecule L1.1 [Danio rerio]
Length = 1197
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/615 (25%), Positives = 256/615 (41%), Gaps = 73/615 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C +P PK W+ +I S + NG+L IS VS +DS Y+C
Sbjct: 373 ATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQTTNGSLKISNVSEEDSNRYTC 432
Query: 61 TATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI- 116
+ + + + ++ + GP P + + + L C + L +
Sbjct: 433 SVSETNKSISADVEVLNRTKIVGP------PQNLHVIRGSDAILHCKYTVDHNLKSPTVQ 486
Query: 117 WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W +G +I N +E+E G L++ + D G Y C V +T+ +
Sbjct: 487 WNKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGIYSCEVSTTLDSDTASG 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P P +++ E + S TI W N P+T Y I E
Sbjct: 539 YITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI--------------EMN 584
Query: 233 IGKEVDRYTGRKEASIENVLVPW------STYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
G+ D +K S+ + W S Y F++ A N +G P+ S Y+TPA K
Sbjct: 585 EGETPDEGQWQKYRSVSQDIDSWRSICSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAK 644
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
P P + + ISW+ + R + N P YK+FWR+ D S +V
Sbjct: 645 PDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAAD----SGAHWTESSV 700
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + + +E+KVQA+ND+G PE V +S ED P AP + T+
Sbjct: 701 SNPPLMVNNTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTELQKTS 760
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT----------TRNWALI 456
+ V W+P+ E++RG L+G++I + + ET +S + ++
Sbjct: 761 VMVRWSPVR--PESVRGHLLGYKIYLRMKGSQWETPGRAVSSSGNPTVIEVPADAAEKIV 818
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWR 515
LQ + Y + + A+N+ GEGP SE P+ P V + P+ +T R
Sbjct: 819 SDLQFYSDYTLTITAFNSKGEGPHSEESF-----STPEGAPGPVLFLPFDSPSESEITLR 873
Query: 516 YVSPSFEEEPIIGYKVRVWEV---DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ +P I GY ++ EV + +P + + +L+P RY +
Sbjct: 874 WEAPHKPNGEIRGYLLQYQEVVIGSESPQHVESIDLPA--VTEFTLKNLNPESRYTFHLS 931
Query: 573 AFSNGGDGRMSSPAI 587
A ++ GDG +PAI
Sbjct: 932 ARNDAGDG---APAI 943
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C PE P P+ W + + + +K++ N L I V D G Y CTA N
Sbjct: 192 GQTLTLQCIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARN 251
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+ + V P Y+ + P + A ++L C A ++ W+ NGV +
Sbjct: 252 SENSVKHHYTVTVEAAP-YWTRSPEEHLYAPGETVRLDCKADGIPAPNIT--WSINGVPV 308
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
D++ P + G L ++N F+D Y+C + G I T V +VE LP
Sbjct: 309 SGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVE----LP 360
Query: 184 GGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 216
+ + AT T D T G P+ H++I+
Sbjct: 361 AQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 398
>gi|1430860|emb|CAA67504.1| brain-derived immunoglobulin superfamily molecule [Mus musculus]
Length = 705
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEPS PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRT 694
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C + Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKGNGRA--KPTYRWVKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + DAG + V ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLTITKGNLQDAGMSQRVGENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV ++V
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNSV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 THPKVLGPP 209
>gi|392347266|ref|XP_003749779.1| PREDICTED: cell adhesion molecule with homology to L1CAM [Rattus
norvegicus]
Length = 1086
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 253/565 (44%), Gaps = 77/565 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G N + C E P+P W+ +G I + + + + + + + +Y C A+
Sbjct: 271 GSNGILLCEAEGEPQPTIKWRVNGLPIENHPFPGDVMFPREISFTNLQPNHTAVYQCEAS 330
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+HG + + V+ + P I N + L Y +
Sbjct: 331 NIHGTILANANIDVV-------DVVPLIQTKNEENYETVVGYSA--FLHCEYFASPKATV 381
Query: 124 IGNM--DLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKI----------ST 170
+ + + + LE + + G LEI + DAG Y C V +T+GK +T
Sbjct: 382 VWEVADETHPLEGGRYHTHENGTLEIERTTEEDAGSYSCWVDNTMGKAVITANLDIRNAT 441
Query: 171 KTTVIVEGPPGLPGGVQVVEVH---------KTSATIQWT-DGAT---NGRPITHYKIIA 217
K V + P +P V+E++ K S + W+ DG NG Y
Sbjct: 442 KLRVFPKN-PRIPKS-HVLELYCESQCDSHLKHSLKLSWSKDGEAFEMNGTEDGSYGSEP 499
Query: 218 RTNWNST---WFN------VSEHVI---------GK--EVDRYTGRKEASIENVLVPWST 257
R T W + SE+++ GK E+ R G +E + L P+
Sbjct: 500 RVPAQPTGHRWLDFLVHGLASEYIVEFEGNREEPGKWEELTRVRG-EETDVVLPLAPYVR 558
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
Y+F+V A NE+G S PS + TP P + P I + ++ I WEPL +QN
Sbjct: 559 YQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKWEPLKSMEQN 618
Query: 318 APNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376
P + Y++ W+ + E++ ET+ + +R+ + Y Y+V+VQAIN +G GP
Sbjct: 619 GPGLEYRVSWKPQGAPEEWEEETVTNH------TLRVMTPTVYAPYDVQVQAINQLGSGP 672
Query: 377 ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-- 434
E + VT++S ED P AP NST + VTW+ I +E + G L G++I +WK
Sbjct: 673 EPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIP--KETVHGLLRGYQINWWKTK 730
Query: 435 -----EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489
+P+E + S RN ++ L+P +++++ V+AYN+ G GPESE Y+ +T
Sbjct: 731 SLLDGRTHPKEVNILRFS-GQRNSGMVPSLEPFSEFHLTVLAYNSKGAGPESEPYIFQTP 789
Query: 490 RKAPQKPPSAVHIKGINPTTVHVTW 514
P++ PS + + ++ T ++W
Sbjct: 790 EGVPEQ-PSFLKVIKVDKDTATLSW 813
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y+ +V A+N+VG S+ + P P + + + + W P++ +
Sbjct: 556 YVRYQFRVTAVNEVGKSHSSQPSDHHETPPAAPDKNPHNIRVQASQPKEMIIKWEPLKSM 615
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMAYNNA 475
+N G + +R+ + + PEE + T N L V + P Y V+V A N
Sbjct: 616 EQNGPG--LEYRVSWKPQGAPEE----WEEETVTNHTLRV-MTPTVYAPYDVQVQAINQL 668
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G GPE + + P P + +N T V VTW + + GY++ W+
Sbjct: 669 GSGPEPQPVTLYSGEDYPSTAPVIHRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWWK 728
Query: 536 ----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590
+D I+ ++ +V L P +H+ VLA+++ G G S P I FQ
Sbjct: 729 TKSLLDGRTHPKEVNILRFSGQRNSGMVPSLEPFSEFHLTVLAYNSKGAGPESEPYI-FQ 787
Query: 591 MGE 593
E
Sbjct: 788 TPE 790
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G+ + G L I VS D G Y CTA
Sbjct: 180 KGDTLLLECFAEGLPTPQIEWSKLGSELPKGRATIEIHEKTLKIENVSYQDRGNYRCTAN 239
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S +++ P +++ P + N L C A E + W NG+
Sbjct: 240 NLLG-KASHDFHVIVEEPPRWKKKPQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGLP 296
Query: 124 IGN 126
I N
Sbjct: 297 IEN 299
>gi|355560430|gb|EHH17116.1| Protein sidekick-1, partial [Macaca mulatta]
Length = 2035
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 158/598 (26%), Positives = 256/598 (42%), Gaps = 41/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 395 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 454
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ-LRCSAHTEELLDVAYIWT 118
C A N G + L V + S PP+ + + L C A + + + Y+W
Sbjct: 455 CYAANTEGSLNASATLTVWNRTSIVH--PPEDHVVIKGTMATLHCGATHDPRVSLRYVWK 512
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 513 KDNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVIE 568
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + H + + W PI +Y I+ + NS W V +G E
Sbjct: 569 LPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPE 626
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 627 MTGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVA 679
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 680 SGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTD 736
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 737 LIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP 796
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYN 473
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 797 --QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFT 854
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKV 531
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 855 TPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQI 909
Query: 532 RVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 910 S-WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAALTAVGAGLLTSSTIS 964
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 153/610 (25%), Positives = 231/610 (37%), Gaps = 73/610 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 305 TVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 364
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 365 EGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 424
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 425 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 475
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 476 TSIVHPPEDHVV-IKGTMATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 532
Query: 238 DRYTGRKEASIENVLVPWS------TYEFKVIAGNELGYGE------PSSPSPQYNTPAD 285
+ WS T E GN+ P SP +P
Sbjct: 533 SLLISQT----------WSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNS 582
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY I +N++ ++ L G
Sbjct: 583 SHSHA-------------VVLSWVRPF---DGNSPILYY-IVELSENNSPWKVH-LSNVG 624
Query: 345 --NVGIAVVRI-PSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSR 400
G+ V + P+ Y + +V A+N+VG G S E + E+ P P+ + +
Sbjct: 625 PEMTGVTVSGLTPARTY----QFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 680
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
G + +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 681 GRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLI 738
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W
Sbjct: 739 IWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQ 798
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
F GYK+ W D + TI P I +L Y VL F+ GD
Sbjct: 799 FINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGD 858
Query: 580 GRMSSPAITF 589
G S+P + +
Sbjct: 859 GPPSTPQLVW 868
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 159/366 (43%), Gaps = 41/366 (11%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR------ 1444
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1445 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1498
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 349
I W+P E N Y+I++R+ + + +++TLK + V +
Sbjct: 1499 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSS 1558
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ V ++
Sbjct: 1559 STSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTAS 1618
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G++I YW+ D+ +T + + L T+Y
Sbjct: 1619 QLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNDTEKMKVLFLPEPVVRLKNLTSHTEY 1676
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1677 LVSISAFNAAGDGPRSDPRQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGI 1733
Query: 526 IIGYKV 531
+ GY+V
Sbjct: 1734 LQGYRV 1739
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 169/415 (40%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 871 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 926
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 927 STTHEYKIQGLSSL-------TTYTIDVAALTAVGAGLLTSSTISSGVPPDLP-GAPSNL 978
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 979 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1038
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1039 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1098
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1099 LPDSQYNGNPESVGYRIKYWRSDLQSSALAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1158
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1159 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1218
Query: 534 WEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D + T+ GN T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1219 RAKDLDPEPRSHTV--RGNYTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1271
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 188/435 (43%), Gaps = 54/435 (12%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 959 TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1012
Query: 227 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1013 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1067
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 336
T P AP+ + L + W PLP + N ++ Y+I +WR ++ Q
Sbjct: 1068 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1123
Query: 337 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
S L + + R+ EF + EYE+++QA N VG GP SEVV + E +P
Sbjct: 1124 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVP 1178
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1179 SAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHTVRGNY 1236
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + + T+
Sbjct: 1237 TQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRLTS 1295
Query: 510 VHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 565
V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1296 VRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAPES 1348
Query: 566 RYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1349 AYIFRLSAKTRQGWG 1363
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 192/489 (39%), Gaps = 53/489 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1252 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1311
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1312 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1363
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1364 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1422
Query: 332 DTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAED 388
E+Q S ++ I P +T Y+++++A ND+G SE + + +D
Sbjct: 1423 RGEWQTYSSSISHEATACIVDRLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1478
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED------------ 436
+P P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1479 VPGEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKTL 1536
Query: 437 ------NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1537 KSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEV 1596
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
AP P V + + + + VTW P + I GYK+ WE D
Sbjct: 1597 FVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNDTEKMK 1656
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
++ + + + +L+ Y + + AF+ GDG S P + G + G+P+ +
Sbjct: 1657 VLFLPEPV-VRLKNLTSHTEYLVSISAFNAAGDGPRSDP----RQGRTHQAAPGAPSFLA 1711
Query: 607 ----ASTTL 611
STTL
Sbjct: 1712 FSEITSTTL 1720
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 183/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWN 222
S++ ++ PP + P V V +TS ++W D NG P + Y+I R++
Sbjct: 1064 SSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQ 1123
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
S+ V+ ++R E +IE + YE ++ A N +G G P S + T
Sbjct: 1124 SSAL---AQVVSDRLER-----EFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1173
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S T++
Sbjct: 1174 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHTVR 1233
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1234 --GNYTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1290
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1291 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1344
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1345 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1404
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A IVD L P Y +R+ A ++ G
Sbjct: 1405 SDGASPIRYFTVQVRELPRGEWQTYSSSI--SHEATACIVDRLRPFTSYKLRLKATNDIG 1462
Query: 579 DGRMSS 584
D SS
Sbjct: 1463 DSDFSS 1468
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 121 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIH 180
Query: 78 LH-----------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
L P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 181 LSIARDIGTPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI 238
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPP 180
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 239 ---------TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPP 288
>gi|184185488|gb|ACC68891.1| neural cell adhesion molecule L1 precursor (predicted) [Rhinolophus
ferrumequinum]
Length = 1260
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/592 (24%), Positives = 253/592 (42%), Gaps = 39/592 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 440 AVEGSTAYLLCKAFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 499
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V ++ I R + C A + L + W +
Sbjct: 500 QAANDQNNVTIVANLQVKDATQIIQEPQNAIEKKGSR-VTFTCQASFDPSLQHSITWRRD 558
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G +L EL ++ I+ L I + ++D G Y CV + + + + ++V G
Sbjct: 559 G-----RNLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVERRAKLLVVGS 613
Query: 180 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWN--STWFNVSEHVIG 234
PG +++ + H + + W+ + PI Y I W+++ + V G
Sbjct: 614 PGPVPRLELSDHHPPKQNQVQLSWSPADDHNSPIEKYDIEFEDQEMEPDKWYSLGK-VPG 672
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ S L P+ Y F+V A N+ G GEPS S TP P + P +
Sbjct: 673 NQT---------STTLKLSPYVRYTFRVTAINKYGPGEPSPASEPVVTPEAAPEKNPVDV 723
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
G G + ++ I+W+PL NAP + Y++ WR + E + V + +
Sbjct: 724 KGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRLQGTRGAWQEQI-----VSDPFLVVS 778
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+ + YE+KVQAIN G GPE +V +S ED PQ P + NS+A+ V W P+
Sbjct: 779 NTSTFVPYEIKVQAINSHGKGPEPQVTIGYSGEDYPQAWPALEDIKILNSSAVLVKWLPV 838
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT-----TRNWALIVG-LQPDTKYYVK 468
+ + ++G L G+ + Y E + + + ++ + ++I+G L+P + Y+++
Sbjct: 839 DPAQ--VKGHLRGYNVTYRWEGSQRKQSRRHVHKDHMLVPANTTSIILGNLRPYSFYHLE 896
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N+ G GP SE T P + P +H++ + T++ + W+ P + G
Sbjct: 897 VQAFNSRGLGPASENRTFSTPEGVPSQ-PEELHLECQSDTSLLLHWQ--PPVSHNGVLTG 953
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
Y + +D + ++ +LSP RY ++ A + G G
Sbjct: 954 YVLSYHPLDDGSMEQLSFNLSDPELRMHNLTNLSPHLRYRFQLQATTKQGPG 1005
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 138/609 (22%), Positives = 233/609 (38%), Gaps = 74/609 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + ++G L++S V D+ + C
Sbjct: 347 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQHGALILSNVQPSDTMVTQC 406
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP KI + L T LL A+
Sbjct: 407 EARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYLAVEGSTAYLLCKAF----- 453
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D TN + D G Y C + ++
Sbjct: 454 GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIVAN 513
Query: 174 VIVEGPPGLPGGVQVVE-----VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ V+ Q+++ + K + + +T A+ + H W N+
Sbjct: 514 LQVK------DATQIIQEPQNAIEKKGSRVTFTCQASFDPSLQH-----SITWRRDGRNL 562
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
E +G + D+Y E + + L + +A +L E + +P P
Sbjct: 563 QE--LG-DSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVVERRAKLLVVGSPGPVPR 619
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV-G 347
S K + +SW P + N+P Y I + D E + + G V G
Sbjct: 620 LELS--DHHPPKQNQVQLSWSPA--DDHNSPIEKYDIEFE---DQEMEPDKWYSLGKVPG 672
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
Y Y +V AIN GPG P + + E P+ P V G +
Sbjct: 673 NQTSTTLKLSPYVRYTFRVTAINKYGPGEPSPASEPVVTPEAAPEKNPVDVKGEGNETNN 732
Query: 407 INVTWNPIELIREN-------IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ +TW P+ + N ++ RL G R W+E + + + +T
Sbjct: 733 MVITWKPLRWMDWNAPQVQYRVQWRLQGTR-GAWQEQIVSDPFLVVSNTSTF-------- 783
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Y +KV A N+ G+GPE + + + PQ P+ IK +N + V V W V P
Sbjct: 784 ---VPYEIKVQAINSHGKGPEPQVTIGYSGEDYPQAWPALEDIKILNSSAVLVKWLPVDP 840
Query: 520 SFEEEPIIGYKVRV-WEVDQ-DMSRAN---DTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ + + GY V WE Q SR + D ++ NT + +L P YH+ V AF
Sbjct: 841 AQVKGHLRGYNVTYRWEGSQRKQSRRHVHKDHMLVPANTTSIILGNLRPYSFYHLEVQAF 900
Query: 575 SNGGDGRMS 583
++ G G S
Sbjct: 901 NSRGLGPAS 909
>gi|326666180|ref|XP_003198206.1| PREDICTED: protein sidekick-2-like, partial [Danio rerio]
Length = 2116
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/598 (23%), Positives = 259/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G ++ + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 340 DGMSIILHCETSGAPRPAITWQKAERVLASGSVQLPRFTLLESGSLLISPSHLLDAGSYT 399
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + P ++ + C + + V +IW
Sbjct: 400 CMASNSRGIDEASADLVVW-ARTRITNPPQDQSVIKGTKAAMTCGVTHDPSVTVRHIWEK 458
Query: 120 NGVRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I + +P + +D G L I+ D G Y C V S G + + V
Sbjct: 459 GGAVI-----DVKSSPRLRLDSNGTLHISQTWSGDIGTYTCRVTSVGGNDTRNAHLRVRQ 513
Query: 179 PPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + + W P+ Y + N N+ W + ++ +
Sbjct: 514 LPHAPENLIATLSISERRTINLTWAQAFDGNSPLIRYILEVSEN-NAPWTVLLANIEPES 572
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ G L+P +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 573 ISVIVGG--------LIPARSYQFRLCAVNDVGKGQFSRETARVSLPEEPPSAPPQTVIA 624
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN P Y I + D + ++ T + N+ + + I
Sbjct: 625 SGRTNQSIMIQWQPPPESHQNGPLQGYIIRYCLSGLPVDCQMKNITNPDQTNLLLEDLII 684
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST + TW+
Sbjct: 685 -----WTNYEIEVAAYNGAGQGVYSPKVTEWTLQGVPTVPPGNVQAEAVNSTTVRFTWSA 739
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + E+ + + + + + I GL+ T+Y+ V+
Sbjct: 740 PS--PQFINGINQGYKLLAWEPGHEEDVTLVTVRPNFQDSVHVGYISGLKKFTEYFTCVL 797
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 798 CFTTPGDGPRSTAQRIRTHEDTP-GPVGHLSFTEILDTSLKVSWK--DPPEKNGILTGYR 854
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + T + + L+ Y ++V +N G G++SS I+
Sbjct: 855 ISWEEFNRTNTRVTHYL--PNMTQEYRVTGLTALTTYTIQVAGMTNKGQGQLSSSTIS 910
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 183/410 (44%), Gaps = 44/410 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
EV S + W G+ PI +Y I R +S W V + E Y +
Sbjct: 1337 EVQARSVLLSWEPGSDGLSPIRYYTIQYRELPDSNW-TVHSASVNHEATSY-------VI 1388
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P+++Y+F+V A N++G E S S T D P +AP+ + + + W+
Sbjct: 1389 DRLKPFTSYQFRVKATNDIGDSEYSEESEAITTLQDAPDKAPTILSVTPHTTTSVLVRWK 1448
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY----GN----VGIAVVRIPSEFYYTE 361
P P E+ N + +++ +R+ +S T++ GN VR SE T+
Sbjct: 1449 PPPEEEINGILLGFRVRYRELRYDRLRSFTVRTVNSPAGNWAELTAPYSVRNLSESSLTQ 1508
Query: 362 YE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
YE +++ N VG GP S +F E +P APQ V + +T ++VT
Sbjct: 1509 YELDNLNKHKRYEIRLSVYNAVGEGPTSSPQEVFVGEAVPTAAPQNVAIQSSTATQLDVT 1568
Query: 411 WNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
W+P + +N G + G++I YW+ ++ E +L + + G T Y +
Sbjct: 1569 WDPPPVEAQN--GDIQGYKIYYWEFQLQNETERLRTLFLPELSVKLKNLTGY---TTYMI 1623
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V A+N AG+GP S RT + AP P+ +H + T+V+++W P +
Sbjct: 1624 SVSAFNAAGDGPRSLPTRGRTQQAAPSA-PNFIHFSELTTTSVNMSWG--EPKQPNGIVE 1680
Query: 528 GYKVRVWE----VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
GY+V V+E VD +S+ + L I DL+ G Y+ R+ A
Sbjct: 1681 GYRV-VYEPCTPVD-GVSKIVTVDVKGSAPLWMKIKDLADGVTYNFRIRA 1728
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 188/451 (41%), Gaps = 35/451 (7%)
Query: 142 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVEVHKTSAT 197
GL +T + AG + G++S+ T I G PP +PG + + + S T
Sbjct: 882 GLTALTTYTIQVAG----MTNKGQGQLSSST--ISSGVPPEMPGPPTNIAISNISPRSVT 935
Query: 198 IQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 254
+Q+ G I+ + I A+ N W V H + E D + + L P
Sbjct: 936 LQFKPGYDGKTSISRWLIEAQIGVIGENEEWVMV--HQLSNEPDARSLEVQG-----LNP 988
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ Y F++ N +G PS PS + T P AP+ I L + W PLP
Sbjct: 989 YTYYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANITLRTASETSLWLRWVPLPEW 1048
Query: 315 KQNA-PNI--YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
+ N P + Y + R + F S + + + + +TEYEVKVQA N
Sbjct: 1049 EYNGNPELVGYRVQYSRLGSKVGFLSHIIPDRQEREFTIEDLEE---WTEYEVKVQAFNG 1105
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
+GPGP S+ V + E +P P V + S++I V W + N G ++G+++
Sbjct: 1106 IGPGPWSQPVHGRTRESVPSSGPANVSAFATTSSSILVRWGDVPETDRN--GLILGYKVV 1163
Query: 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYR 490
Y ++D + + T + GL Y ++V+++ G+G P S ERT
Sbjct: 1164 YKEKDAESVLHFWTVEGNTTYSVQLTGLGKYVLYEIQVLSFTRIGDGMPSSPPIFERTLD 1223
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN-DTIIP 549
P PP + + ++V + W+ P+ I+ Y++ ++ AN D + P
Sbjct: 1224 DVP-GPPVGILFPEVRTSSVRLIWQ--PPAQPNGIILAYQIAFRRNSSSITSANVDVLNP 1280
Query: 550 VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
A L P Y R+ A + G G
Sbjct: 1281 SARQYTA--TGLKPESVYVFRLTAQTRKGWG 1309
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 204/515 (39%), Gaps = 48/515 (9%)
Query: 21 KFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78
+ +W+K G +I S R ++ NG L IS D G Y+C T+V G D L V
Sbjct: 453 RHIWEKGGAVIDVKSSPRLRLDSNGTLHISQTWSGDIGTYTCRVTSVGGNDTRNAHLRVR 512
Query: 79 HGPSYYEQLPPKITIAAHRNLQLRC-------SAHTEELLDVA---YIWTHNGVRIGNMD 128
P E L ++I+ R + L S +L+V+ WT V + N++
Sbjct: 513 QLPHAPENLIATLSISERRTINLTWAQAFDGNSPLIRYILEVSENNAPWT---VLLANIE 569
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+ I GGL+ + F + V K + + + ++ E P P V
Sbjct: 570 PESISV----IVGGLIPARSYQFRLCAVND-VGKGQFSRETARVSLPEEPPSAPPQTVIA 624
Query: 189 VEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
S IQW + NG P+ Y I + +S + ++ T +
Sbjct: 625 SGRTNQSIMIQWQPPPESHQNG-PLQGYIIR---------YCLSGLPVDCQMKNITNPDQ 674
Query: 246 ASI--ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
++ E++++ W+ YE +V A N G G SP T P P +
Sbjct: 675 TNLLLEDLII-WTNYEIEVAAYNGAGQGV-YSPKVTEWTLQGVPTVPPGNVQAEAVNSTT 732
Query: 304 LSISWEPLPREKQNAPNIYYKIF-WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ +W + N N YK+ W ++ + T++ + V I +TEY
Sbjct: 733 VRFTWSAPSPQFINGINQGYKLLAWEPGHEEDVTLVTVRPNFQDSVHVGYISGLKKFTEY 792
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENI 421
V G GP S I + ED P F+ + T++ V+W +P E
Sbjct: 793 FTCVLCFTTPGDGPRSTAQRIRTHEDTPGPVGHLSFTEILD-TSLKVSWKDPPEK----- 846
Query: 422 RGRLIGHRIKYWKEDNPEETAV-YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+RI W+E N T V +YL T+ + + GL T Y ++V N G+G
Sbjct: 847 NGILTGYRIS-WEEFNRTNTRVTHYLPNMTQEYR-VTGLTALTTYTIQVAGMTNKGQGQL 904
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
S + PP+ + I I+P +V + ++
Sbjct: 905 SSSTISSGVPPEMPGPPTNIAISNISPRSVTLQFK 939
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 6/171 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P VW KD I R ++ G+L I+ + DD+G++ C A N+
Sbjct: 251 VDIPCQARGVPQPDIVWYKDAVPISPVKTPRYRVLVGGSLQINGLLPDDTGMFQCFARNL 310
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P + ++ L C + + + G
Sbjct: 311 AGEIQTNTYLAVTSIAPNITAGPSDSAVIDGMSIILHCETSGAPRPAITWQKAERVLASG 370
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ L ++ G L I+ + DAG Y C+ ++ G ++V
Sbjct: 371 SVQLPRFTL----LESGSLLISPSHLLDAGSYTCMASNSRGIDEASADLVV 417
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 147/365 (40%), Gaps = 52/365 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V++ +G G PSSP P + D P I + + + W+P + N
Sbjct: 1197 YEIQVLSFTRIGDGMPSSP-PIFERTLDDVPGPPVGILFPEVRTSSVRLIWQP--PAQPN 1253
Query: 318 APNIYYKIFWRKKN------DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
+ Y+I +R+ + + + + + ++Y G+ P Y + + Q
Sbjct: 1254 GIILAYQIAFRRNSSSITSANVDVLNPSARQYTATGLK----PESVYV--FRLTAQTRKG 1307
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRG-FNSTAINVTWNPIELIRENIRGRLIGHRI 430
G E+ VVT PQ + V + + ++ ++W P IR I +R
Sbjct: 1308 WGEAAEALVVTT-EKRARPQPTSRPVVPQEEVQARSVLLSWEPGSDGLSPIRYYTIQYR- 1365
Query: 431 KYWKEDNPEETAVYYLSRTTRNWA--LIVGLQPDTKYYVKVMAYNNAGEGPESERYLE-R 487
+ P+ + + +I L+P T Y +V A N+ G+ SE
Sbjct: 1366 -----ELPDSNWTVHSASVNHEATSYVIDRLKPFTSYQFRVKATNDIGDSEYSEESEAIT 1420
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRA- 543
T + AP K P+ + + T+V V W+ P EEE ++G++VR E+ D R+
Sbjct: 1421 TLQDAPDKAPTILSVTPHTTTSVLVRWK---PPPEEEINGILLGFRVRYRELRYDRLRSF 1477
Query: 544 --NDTIIPVGNTLDA-----------------DIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
P GN + ++ +L+ KRY +R+ ++ G+G SS
Sbjct: 1478 TVRTVNSPAGNWAELTAPYSVRNLSESSLTQYELDNLNKHKRYEIRLSVYNAVGEGPTSS 1537
Query: 585 PAITF 589
P F
Sbjct: 1538 PQEVF 1542
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 130/333 (39%), Gaps = 28/333 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G SSP + A P AP + L ++W+P P E QN
Sbjct: 1520 YEIRLSVYNAVGEGPTSSPQEVFVGEA-VPTAAPQNVAIQSSTATQLDVTWDPPPVEAQN 1578
Query: 318 APNIYYKIFW---RKKNDTE-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI++ + +N+TE ++ L E V++ + YT Y + V A N G
Sbjct: 1579 GDIQGYKIYYWEFQLQNETERLRTLFLPELS------VKLKNLTGYTTYMISVSAFNAAG 1632
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S + + P AP + +T++N++W E + N G + G+R+ Y
Sbjct: 1633 DGPRSLPTRGRTQQAAPS-APNFIHFSELTTTSVNMSWG--EPKQPN--GIVEGYRVVYE 1687
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W I L Y ++ A GPE E +
Sbjct: 1688 PCTPVDGVSKIVTVDVKGSAPLWMKIKDLADGVTYNFRIRA-KTLTYGPEIEANITTGPG 1746
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I + + + W P PI Y + D+ + IP
Sbjct: 1747 EGAPGPPGEPFISRYG-SALTLHWSNGDPG--RAPITRYVIEARPSDEGLWDILIKDIPK 1803
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
TL+ D L G Y RV+A ++ G G
Sbjct: 1804 EVTSYTLNLDT--LREGVTYDFRVIAVNDYGYG 1834
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + ++ T+ W++G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1758 ISRYGSALTLHWSNGDPGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTLNLDTLR 1816
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPS 274
E V TY+F+VIA N+ GYG PS
Sbjct: 1817 EGV-----TYDFRVIAVNDYGYGSPS 1837
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P W +DG I R I + L+I D+G Y A N + + ++
Sbjct: 66 PRPGITWFRDGRKIPPSSRIAITLDNTLVILSTVAPDAGRYYAQAVNDKNGENKTSQPVI 125
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L GP+ I + + L C A+ L+ ++ W NGV + N
Sbjct: 126 LTVENVGGPADPIAPSIIIPPKNTSVMVGTFEVTLECVANARPLIKLSITWRKNGVLV-N 184
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
L + G L I+ +D+G Y+C
Sbjct: 185 RGLRDF--------GRRLTISGPLVSDSGYYQC 209
>gi|322789026|gb|EFZ14484.1| hypothetical protein SINV_07406 [Solenopsis invicta]
Length = 779
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 162/616 (26%), Positives = 259/616 (42%), Gaps = 73/616 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + I C PKP+ W KDG + +G R KI + G+L I V+ D+GIY+C A+
Sbjct: 37 DGKIIQITCRVFGTPKPEVKWVKDG-LELTGSRYKILDVGDLEIENVTFQDAGIYTCYAS 95
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN--LQLRCSAHTEELLDVAYIWTHNG 121
N+ G + L V ++ P +A N + RC A + L + W NG
Sbjct: 96 NIFGEVNASACLTVKEHTKITDE-PEDYEVARGSNSIAKFRCKAIADPTLPLTIDWLSNG 154
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
I D + + I I+ L I + D+G Y C+ ++ + ++ + T++V+ P
Sbjct: 155 EPI---DFKK-QPRFIQINKYTLIIIGITELDSGVYTCIARTDLDEVRAQATLMVQTVPN 210
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V + + SA ++W N PI HY I T + + S + + RY
Sbjct: 211 APRLVST-KCNPNSAIVEWIPMGDNRAPILHYIIQYNTTFTPDIWETSTNYVPATDLRY- 268
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
E + PW+ Y F V+A N++G PS T AD PY+ P + G G
Sbjct: 269 -------EVPMSPWANYTFHVLALNKIGLSLPSPHGDVCTTEADVPYKNPDNVMGKGTTP 321
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW + + N P YKIF+++ I + +PS
Sbjct: 322 QNLVISWTTMQEIEHNGPKFLYKIFYKRD-----------------IPGLSLPS------ 358
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
P +V T + D+P P V +G + ++W ++ I N
Sbjct: 359 --------------PHGDVCT--TEADVPYKNPDNVMGKGTTPQNLVISWTTMQEIEHN- 401
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGP- 479
G ++I ++K D P E V + ++V QP KY +KV+A N GE
Sbjct: 402 -GPKFLYKI-FYKRDIPGENWVTVDVHDWKKNNVVVENQPTYQKYRIKVVAINEKGECRI 459
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINP-TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
++ + + P + P + I TT ++W V + GYK++ W D+
Sbjct: 460 PADEVIGYSGEDVPLQAPDNFTLNEIKSGTTAQLSWSPVPEETVRGELQGYKIQTW-TDK 518
Query: 539 DMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM-----G 592
D I I G+ A I + P + R+LA+ NGG +S ++F M G
Sbjct: 519 DGEEGMREIDIRGGDKTHALIAEFVPYSKNFARILAY-NGGYAGPASDTLSFDMPEGVPG 577
Query: 593 EEKEFK---SGSPALY 605
+FK GS AL+
Sbjct: 578 RVLDFKVLNMGSSALF 593
>gi|26331270|dbj|BAC29365.1| unnamed protein product [Mus musculus]
Length = 705
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+ L PW YEF+ +A N +G GEP PS + T
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPGRPSEKRRT 694
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E I+ DG L I N + +DAG Y C+ + G S+ VIV+ P
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDP 497
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVVKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKARRHKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNVVKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>gi|297273516|ref|XP_001087501.2| PREDICTED: protein sidekick-2 [Macaca mulatta]
Length = 2037
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 220/503 (43%), Gaps = 35/503 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 305 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 364
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V YIW
Sbjct: 365 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEK 423
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G ++ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 424 DGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 478
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W ++
Sbjct: 479 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPW-----TILLAS 532
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 533 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 589
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I W +F++ T + N+ + + I
Sbjct: 590 SGRTNQSIMIQWQPPPESHQNGILKGYIIRWCMPVVPVGYQFKNITDADVNNLLLEDLII 649
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 650 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 704
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 705 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 762
Query: 471 AYNNAGEGPESERYLERTYRKAP 493
+ G+GP S L RT+ P
Sbjct: 763 CFTTPGDGPRSAPQLVRTHEDVP 785
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 181/424 (42%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1267 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1325
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1326 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1373
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1374 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1433
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1434 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSTPQEVFVGEAVPTAAPR 1493
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L N G + G++I +W+ E +L+ +
Sbjct: 1494 NVVVHGATATQLDVTWEPPPLDSHN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1551
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1552 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1607
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1608 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1664
Query: 570 RVLA 573
R+ A
Sbjct: 1665 RIRA 1668
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 181/416 (43%), Gaps = 45/416 (10%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQ 187
PN+ ++ GL +T + E ++ G+ + I G PP LPG +
Sbjct: 812 PNVTLEYRVTGLTALTTYTI------EVAAMTSKGQGQVSASTISSGVPPELPGPPTNLG 865
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRK 244
+ + S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 866 ISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----R 919
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
+ + L P++ Y F++ N +G PS PS + T P AP+ + L
Sbjct: 920 SMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSL 978
Query: 305 SISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY---- 358
+ W PLP + N ++ YKI K + ++ +TL + R+ E+
Sbjct: 979 WLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDL 1030
Query: 359 --YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1031 EEWTEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EV 1088
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G
Sbjct: 1089 PEADRNGLVLGYKVIYKEKDSDAQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIG 1148
Query: 477 EG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+G P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1149 DGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1201
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 362 YEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y+ ++ A+NDVG G ++E V++ E+ P PQ V + G + +I + W P
Sbjct: 551 YQFRLCAVNDVGKGQFSKDTERVSL--PEEPPTAPPQNVIASGRTNQSIMIQWQPPPESH 608
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+N G L G+ I++ P ++ N L+ L T Y ++V AYN+AG G
Sbjct: 609 QN--GILKGYIIRWCMPVVPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 666
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S + E T + P PP VH + N TT+ TW SP F GYK+ WE +Q
Sbjct: 667 VYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQ 726
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKR----YHMRVLAFSNGGDGRMSSPAI 587
+ T P N D+ V G + Y VL F+ GDG S+P +
Sbjct: 727 EEEVTMVTARP--NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSAPQL 777
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 921 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 980
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 981 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1040
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1041 QAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGY 1100
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1101 KVIYKEKDSD-AQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1157
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 957 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1014
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1015 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1066
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1067 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1125
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1126 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1183
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1184 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1239
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1240 ITAQTRKGWGDAAEALVVTTEKRDRPQPPSRPVVQQEDVRARSVLLSWEPGSDGL--SPV 1297
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1298 RYYTIQTRELPS--GRWTLHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G S+P + A P AP + G L ++WEP P + N
Sbjct: 1460 YEIRMSVYNAVGEGPSSTPQEVFVGEA-VPTAAPRNVVVHGATATQLDVTWEPPPLDSHN 1518
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1519 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1573
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1574 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1628
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1629 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1686
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1687 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1744
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1745 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1780
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1697 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1753
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1754 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1787
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 106/282 (37%), Gaps = 38/282 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 16 GEAAVIHAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 75
Query: 64 NVHGMDESKGRLIVLH------GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELL 111
N D + I L GP+ I +A + L C A+ L+
Sbjct: 76 NDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLI 135
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKI 168
+ IW +G+ L + I+ L I N + +DAG YEC + S+V +
Sbjct: 136 KLHIIWKKDGM---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSV 186
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ V PP V+ E H T+ + D + + I TW+
Sbjct: 187 VRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKD 235
Query: 229 SEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 236 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAG 277
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 216 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNA 275
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 276 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 332
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 333 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 382
>gi|351712766|gb|EHB15685.1| Neuronal cell adhesion molecule, partial [Heterocephalus glaber]
Length = 843
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 215/506 (42%), Gaps = 63/506 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I ++ +G Y+C A N G+
Sbjct: 179 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAPKNSTGTYTCVARNKLGI 236
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L W + G +
Sbjct: 237 AKNEVHLEI-KDPTRILKQPEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDN---GELP 292
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
+E +D L +T+ D G Y CV +T+ +S + V P P +++
Sbjct: 293 SDE----RFTVDKDHLVVTDVRDNDGGTYTCVANTTLDDVSASAELSVVDVPNPPFDLEL 348
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEA 246
S + WT G N PIT + I + + W + +E +
Sbjct: 349 TNQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHESGLWRHQAE----------VSGTQT 398
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
+ + L P Y F+V+A N +G PS S QY T A +P + P+ + G G + +L I
Sbjct: 399 TAQLKLSPHVNYSFRVMAENSIGRSLPSEGSEQYLTKAAEPDKNPTAVEGLGSEPDNLVI 458
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365
+W+PL + N P + YK+ WR+K+ D E+ S + NV +V F Y +K
Sbjct: 459 TWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTPTF--VPYLIK 513
Query: 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRL 425
VQA+NDVG PE VV S ED+P VAP V NST V W+P+ L ++IRG L
Sbjct: 514 VQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVNVNVVNSTLAEVQWDPVPL--KSIRGHL 571
Query: 426 IGHR------------------------IKYWKEDNPEETAVYYLSRT------TRNWAL 455
G+R I YWK P + +L + ++ +
Sbjct: 572 QGYRASRRSSLLSDRALANATWPIQRNEIYYWKAQGPSQRNRRHLEKKILTFQGSKTHGM 631
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPES 481
+ GL+P + Y + V + GEGP S
Sbjct: 632 LPGLEPFSHYSLNVRVVSGKGEGPAS 657
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 120/574 (20%), Positives = 212/574 (36%), Gaps = 89/574 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I R+I + ++ S V S +Y
Sbjct: 78 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRRI-DGDTIIFSNVQERSSAVYQ 134
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELL 111
C A+N +G + + VL PP+I + A+R L C+ L
Sbjct: 135 CNASNEYGYLLANAFVNVL-------AEPPRILTSENTLYQVIANRPAFLDCAFFGSPLP 187
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
+ + G + + D+ L + G LEI A G Y CV ++ +G +
Sbjct: 188 TIEWFKGAKGSAL-HEDIYVLH------ENGTLEIPVAPKNSTGTYTCVARNKLGIAKNE 240
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------N 222
+ ++ P ++++ A +Q T + H + +IA W +
Sbjct: 241 VHLEIKDP------TRILK-QPEYAVVQRGSTVTFECKVKHDHTLIATVTWLKDNGELPS 293
Query: 223 STWFNVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
F V +H++ +V G + N + V A EL + P+P ++
Sbjct: 294 DERFTVDKDHLVVTDVRDNDGGTYTCVANTTLD------DVSASAELSVVD--VPNPPFD 345
Query: 282 ----TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQ 336
DK Q +SW P + N+P + I + +++
Sbjct: 346 LELTNQLDKSVQ----------------LSW--TPGDDNNSPITKFIIEYEDAMHESGLW 387
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVA 393
+ G A +++ + Y +V A N +G P SE +AE P
Sbjct: 388 RHQAEVSGTQTTAQLKLSP---HVNYSFRVMAENSIGRSLPSEGSEQYLTKAAE--PDKN 442
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
P V G + +TW P+ N G + +++ + ++D +E ++ ++
Sbjct: 443 PTAVEGLGSEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK-- 498
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
++ G Y +KV A N+ G PE + + P P V++ +N T V
Sbjct: 499 YIVSGTPTFVPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVNVNVVNSTLAEVQ 558
Query: 514 WRYVSPSFEEEPIIGYKV-RVWEVDQDMSRANDT 546
W V + GY+ R + D + AN T
Sbjct: 559 WDPVPLKSIRGHLQGYRASRRSSLLSDRALANAT 592
>gi|307199317|gb|EFN79970.1| Down syndrome cell adhesion molecule-like protein 1 [Harpegnathos
saltator]
Length = 1981
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 170/621 (27%), Positives = 254/621 (40%), Gaps = 62/621 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRK--IFENGNLLISPVSRDDS 55
G V+I C E P P WK+ D +G GG + NG+L+I VSRD +
Sbjct: 706 GHGVSIACQAEGFPIPTVTWKQSIGETPGDYRELGYGGTEGAGVARNGSLVIPRVSRDHA 765
Query: 56 GIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
G Y C A+N G SK RL V GP + + ++ ++ LRC A + LD++
Sbjct: 766 GFYLCQASNGIGPGLSKLIRLTVHAGPQVTVRTRQE-SVRRGESVILRCEAEGDAPLDLS 824
Query: 115 YIWTHNGVRIG-NMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKIST 170
W +I N D+ + ++ G + L + AS D G+Y CV + G
Sbjct: 825 --WRARDSKIDPNYDVRYVVDNTVDTSGRVTTELRVVQASHMDRGDYVCVAANAYGHAKA 882
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKIIARTNWNST 224
++V+ PP P + V E S + WT D + PIT+Y I+
Sbjct: 883 TIHLLVQEPPDFPRNLHVAEQGSRSILLAWTSPASDRDASHASSPITNY-IVQYKEAQDV 941
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
W EH K V G ++ + L P +TY F+V+A N LG PS T
Sbjct: 942 WH---EHNTQKLV---AGDNTVALVSPLKPATTYHFRVLAENHLGTSAPSDIL-HVQTDG 994
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
+ P P + L I+W+P R N + Y I + + + T +
Sbjct: 995 EVPGGPPRHVSVEPLGPQQLKITWQPPDRSLWNGELLGYTIGYTNLGGDDQSTNTTR--- 1051
Query: 345 NVGIAVVRIPSEFY-------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGV 397
VGI R S Y YT+Y V V+A N G GP S+ V + ED+P PQ V
Sbjct: 1052 -VGITGNRDGSHDYRLTGLRKYTQYSVVVKAFNSKGDGPGSDPVMAHTLEDVPSAPPQNV 1110
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTT 450
I VTW P + + G ++G+++ Y + ET + + T
Sbjct: 1111 ACAALTGQNIQVTWKPPP--SDKVHGVVLGYKLLYEAASGAASDSQSGRETKISHALST- 1167
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
++ L P T Y V+V+AY AGEG S T P P +K +
Sbjct: 1168 ----VLHALSPYTNYTVQVLAYTKAGEGVSSSAVSCTTEETVPDAPE---RVKAVVSGEN 1220
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHM 569
V ++ P + Y V + +DQ + + + +P +L + L P + Y
Sbjct: 1221 AVVISWLPPRRPNGLLTKYTVYIRVLDQGQEVKISKSTLP-AQSLHHEATGLKPHESYEA 1279
Query: 570 RVLAFSNGGDGRMSSPAITFQ 590
V A + G G S+P I Q
Sbjct: 1280 WVTASTKVGQGS-STPVIKLQ 1299
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C P+ W KDG + +G R + + + ++ V+R+D G+Y C N
Sbjct: 168 GKSAYLTCTASGFPQAVLYWLKDGQPLRTGARVRTVSSERISVTSVAREDRGMYQCFVRN 227
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ + + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 228 EYEIAQGIAELRL-------GEIAPQLVYRFIEQTMQPGPSVSLKCSAAGNPTPQIS--W 278
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ IT D GEYEC+ S G+ +
Sbjct: 279 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNITTVKPEDGGEYECIASSRAGETRHSARL 337
Query: 175 IVEGPP 180
+ G P
Sbjct: 338 NIYGLP 343
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-----KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
V I C A P P W +++ I S G + +G+L+I V +D G Y CTA
Sbjct: 77 VVIPCVAYANPTPSNRWYYNRNQREEPIEESSGH-YVVRDGSLIIQNVEENDGGSYMCTA 135
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG- 121
+N G + + RL V S + Q P T+ ++ L C+A W +G
Sbjct: 136 SNSEGSETLEIRLTVSASLSVHVQ-PAIQTVDLGKSAYLTCTA--SGFPQAVLYWLKDGQ 192
Query: 122 -VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 162
+R G + T + + +T+ + D G Y+C V+
Sbjct: 193 PLRTG----ARVRT----VSSERISVTSVAREDRGMYQCFVR 226
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 391 QVAPQG--VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPEETAVYYL 446
QV P + + G + AI + W + I+G L+ +R ++ W+E + A +L
Sbjct: 1391 QVPPTSPTLLATGTTTDAIQLQWKQGDNGGAPIKGFLLAYRREFAEWEEVMLDRRASTHL 1450
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506
+ GLQ T+Y + A+N G G S+ +T P PP H N
Sbjct: 1451 ---------LEGLQCGTRYQFTLAAFNRIGSGSASDIQTAKTNGSKPVPPPKH-HFVRAN 1500
Query: 507 PTTVHV---TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 563
T V + W+ S + + V + D ++ + P IVDL
Sbjct: 1501 QTFVILELAAWQDGGCS-----LTYFVVEYRRLPGDWLLVSNNVPPQSK---FPIVDLES 1552
Query: 564 GKRYHMRVLAFSNGG 578
G Y +RV A++N G
Sbjct: 1553 GTSYELRVTAYNNAG 1567
>gi|296192587|ref|XP_002744137.1| PREDICTED: protein sidekick-1 [Callithrix jacchus]
Length = 2093
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 158/601 (26%), Positives = 252/601 (41%), Gaps = 47/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 419 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYT 478
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + LRC A + + + Y+W
Sbjct: 479 CYAANTEGSLNASAMLTVWNRTSIVHP-PEDHVVIKGTTATLRCGAMHDPRVSLRYVWKK 537
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 538 DNVVLTPSSTSRI---MVEKDGSLL-ISQTWSGDIGDYTCDIVSEGGNDSRMARLEVIEL 593
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEHVI 233
P P + H + + W PI +Y I+ + NS W NV +
Sbjct: 594 PHSPQNLLASPNSSHSHAVALSWVRPFDGNSPILYY-IVELSENNSPWKVHLSNVDPEMT 652
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V L P TY+F+V A NE+G G+ S+ + + P + P P
Sbjct: 653 GVTVSG------------LTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKN 700
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVR 352
I G + + W+P P + N Y + +R E+Q + + +
Sbjct: 701 IVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCL 757
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T+YE++V A N G G S VT ++ + +P PQ V + NST I WN
Sbjct: 758 VMDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWN 817
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVM 470
P ++ I G G+++ W D PE V ++ + I L+ T Y+ V+
Sbjct: 818 PPP--QQFINGINQGYKLLAWPADAPEAVTVITIAPDFHGVHHGHITNLRKFTAYFTSVL 875
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIG 528
+ G+GP S L T+ KP + H+ I T++ V+W+ P + I G
Sbjct: 876 CFTTPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITG 930
Query: 529 YKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
Y++ WEV ++ SR T+ T + I LS Y + V A + G G ++S I
Sbjct: 931 YQIS-WEVYGRNDSRLMHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTI 987
Query: 588 T 588
+
Sbjct: 988 S 988
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 148/349 (42%), Gaps = 31/349 (8%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V EV S +QW G+ PI ++ + R W S + +
Sbjct: 1411 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTFSSSI--------SHEAT 1462
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
A I L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1463 ACIVERLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1522
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 349
I W+P E N Y+I++R+ K+ ++E + + V +
Sbjct: 1523 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTVNSS 1582
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ V ++
Sbjct: 1583 STSTMCELTHLKKYRRYEVIMTAYNIIGESPASTPVEVFVGEAAPAMAPQNVQVTPLTAS 1642
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G++I YW+ D+ ET + + L TKY
Sbjct: 1643 QLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKTKVLFLPEPVVRLKNLTSHTKY 1700
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
V + A+N AG+GP S+ RT++ AP PS + I TT++V+W
Sbjct: 1701 LVSISAFNAAGDGPRSDPRQGRTHQAAPGA-PSFLAFSEITSTTLNVSW 1748
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 895 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLMHTLN 950
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 951 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGTGLVTSSTISSGVPPDLP-GAPSNL 1002
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1003 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1062
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1063 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVP 1122
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1123 LPDSQYNGNPESVGYRIKYWRSDVQSSVLAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1182
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1183 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1242
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D + ++ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1243 RAKDLD-AEPRSHVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1295
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 189/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 981 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1036
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1037 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1089
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1090 RVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1145
Query: 335 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
QS L + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1146 VQSSVLAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRES 1200
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1201 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDAEPRSHVVRG 1258
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1259 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRL 1317
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1318 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAP 1370
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1371 ESAYIFRLSAKTRQGWG 1387
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N+VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 665 YQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 724
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L++ L T+Y ++V AYN AG G
Sbjct: 725 --GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVMDLIIWTQYEIQVAAYNGAGLGVF 782
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TT+ W F GYK+ W D
Sbjct: 783 SRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPE 842
Query: 541 SRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ TI P I +L Y VL F+ GDG S+P + +
Sbjct: 843 AVTVITIAPDFHGVHHGHITNLRKFTAYFTSVLCFTTPGDGPPSTPQLVW 892
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 193/489 (39%), Gaps = 53/489 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1276 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1335
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1336 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1387
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1388 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1446
Query: 332 DTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAED 388
E+Q S ++ I P +T Y+++++A ND+G SE + + +D
Sbjct: 1447 RGEWQTFSSSISHEATACIVERLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1502
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED------------ 436
+P P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1503 VPGEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKML 1560
Query: 437 ------NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1561 KSPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASTPVEV 1620
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
AP P V + + + + VTW P + I GYK+ WE D
Sbjct: 1621 FVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKTK 1680
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
++ + + + +L+ +Y + + AF+ GDG S P + G + G+P+ +
Sbjct: 1681 VLFLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPRSDP----RQGRTHQAAPGAPSFLA 1735
Query: 607 ----ASTTL 611
STTL
Sbjct: 1736 FSEITSTTL 1744
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 183/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P V V +TS ++W D NG P + Y+I W S
Sbjct: 1088 SSRVIQTLQAPPDVAPASVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRS 1144
Query: 224 TWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+V V+ + V DR +E +IE + YE ++ A N +G G P S + T
Sbjct: 1145 ---DVQSSVLAQVVSDRL--EREFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1197
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1198 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDAEPRSHVVR 1257
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1258 --GNHTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1314
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1315 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1368
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1369 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1428
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A IV+ L P Y +R+ A ++ G
Sbjct: 1429 SDGASPIRYFTVQVRELPRGEWQTFSSSI--SHEATACIVERLRPFTSYKLRLKATNDIG 1486
Query: 579 DGRMSS 584
D SS
Sbjct: 1487 DSDFSS 1492
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 67/177 (37%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 329 TVDIGCRAMGVPLPTLQWYKDAVSISKLQNPRYKVLASGGLRIQKLHPEDSGIFQCFASN 388
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 389 EGGEIQTHTYLDVTNIAPVFTQQPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 448
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+IT DAG Y C +T G ++ + V
Sbjct: 449 GSVRIPRFML---------LESGGLQITPVFIQDAGNYTCYAANTEGSLNASAMLTV 496
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1826 EGSPGSPRDVLVTK-SASELTLQWTEGHAGDTPTTGYVIEARPSDEGLW-----DMFVKD 1879
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ R S++ L TYEF+V+A NE GYGEPSSPS
Sbjct: 1880 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSSPS 1919
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 138/336 (41%), Gaps = 20/336 (5%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1599 YEVIMTAYNIIGESPASTPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1657
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 377
YKI++ + D++ ++E K + VVR+ + +T+Y V + A N G GP
Sbjct: 1658 GNIQGYKIYYWEA-DSQNETEKTKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1715
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437
S+ + + P AP + ST +NV+W E + N G L G+R+ Y +
Sbjct: 1716 SDPRQGRTHQAAPG-APSFLAFSEITSTTLNVSWG--EPVAAN--GILQGYRVVY-EPLA 1769
Query: 438 PEETAVYYLSRTTR----NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493
P + ++ R W + L Y+ +V A GPE L+ P
Sbjct: 1770 PVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQA-RTITYGPE----LQANVTAGP 1824
Query: 494 QK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN 552
+ P + + + +T ++ + P GY + D+ + IP
Sbjct: 1825 AEGSPGSPRDVLVTKSASELTLQWTEGHAGDTPTTGYVIEARPSDEGLWDMFVKDIPRSA 1884
Query: 553 TLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAI 587
T +D L G Y RV+A + G G SSP++
Sbjct: 1885 TSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSSPSM 1920
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 145 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTPSDTGAYYVQAVNEKNGENKTSPFIH 204
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + +++ W NGVRI
Sbjct: 205 LSIARDIGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEELSVTWKRNGVRI-- 262
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 263 -------TSGLHNFGRRLTISNPTSADTGLYVC 288
>gi|119607692|gb|EAW87286.1| sidekick homolog 1 (chicken), isoform CRA_a [Homo sapiens]
Length = 2072
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 253/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 352 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 411
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 412 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 470
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 471 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 526
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + V H + + W PI +Y I+ + NS W V +G E+
Sbjct: 527 PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 584
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 585 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 637
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 638 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 694
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 695 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 753
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 754 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 812
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 813 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 867
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 868 -WEVYGRNNSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTIS 921
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1344 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1401
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1402 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1451
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ KN ++E + +
Sbjct: 1452 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALRAELTAQSSFKT 1511
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1512 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1571
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1572 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1629
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1630 HTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1686
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1687 ANGILQGYRV 1696
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 151/614 (24%), Positives = 231/614 (37%), Gaps = 81/614 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 262 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 322 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 381
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT------- 172
VRI L ++ G L+I DAG Y C +T G ++
Sbjct: 382 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 432
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
T IV P V + T+AT+ GAT+ ++ + + N T + S V
Sbjct: 433 TSIVHPPE------DHVVIKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIV 484
Query: 233 IGKEVDRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQY 280
+ K+ + WS Y ++++ GN+ P SP
Sbjct: 485 VEKDGSLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLL 534
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+P A + +SW P N+P +YY I +N++ ++
Sbjct: 535 VSPNSSHSHA-------------VVLSWVRPF---DGNSPILYY-IVELSENNSPWKVH- 576
Query: 340 LKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG 396
NVG + V + Y+ +V A+N+VG G S E + E+ P P+
Sbjct: 577 ---LSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKN 633
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+ + G + +I V W P N G L G+ ++Y P E ++ N+ L+
Sbjct: 634 IVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLV 691
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L T+Y ++V AYN AG G S E T + P PP V + +N TT+ W
Sbjct: 692 TDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNP 751
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFS 575
F GYK+ W D + TI P I +L Y VL F+
Sbjct: 752 PPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFT 811
Query: 576 NGGDGRMSSPAITF 589
GDG S+P + +
Sbjct: 812 TPGDGPPSTPQLVW 825
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 167/416 (40%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 828 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNNSRLTHTLN 883
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 884 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGTGLVTSSTISSGVPPDLP-GAPSNL 935
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E ++ IP
Sbjct: 936 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 995
Query: 355 SEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YT Y +++ +N VGP P S V+ A P VAP V R + T++ + W
Sbjct: 996 NLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAP--PDVAPTSVTVRTASETSLRLRW 1053
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+RIKYW+ D +S I L+ +Y +++ A
Sbjct: 1054 VPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA 1113
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1114 FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKI 1173
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1174 LFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1228
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 914 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 969
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 970 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1021
Query: 278 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 333
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1022 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1077
Query: 334 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1078 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRE 1132
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1133 SVPSAAPENVSAEAVSSTQILLTWTSVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVR 1190
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1191 GNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVR 1249
Query: 507 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLS 562
T+V + W+ EEP I+GY++ S T + VG T+ DL+
Sbjct: 1250 LTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLA 1302
Query: 563 PGKRYHMRVLAFSNGGDG 580
P Y R+ A + G G
Sbjct: 1303 PESAYIFRLSAKTRQGWG 1320
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 195/488 (39%), Gaps = 51/488 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1209 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1268
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1269 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1320
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1321 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELP 1379
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1380 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1437
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--------------D 436
P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1438 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRELEYEAGSGTEAKTLK 1494
Query: 437 NP-----EETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
NP E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1495 NPIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1554
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547
AP P V + + + + VTW P + I GYK+ WE D +
Sbjct: 1555 VGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKV 1614
Query: 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS- 606
+ + + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1615 LFLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPKSDP----QQGRTHQAAPGAPSFLAF 1669
Query: 607 ---ASTTL 611
STTL
Sbjct: 1670 SEITSTTL 1677
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 35/459 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 988 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASET 1047
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 249
S ++W D NG P + Y+I W S ++ + + V DR +E +IE
Sbjct: 1048 SLRLRWVPLPDSQYNGNPESVGYRI---KYWRS---DLQSSAVAQVVSDRL--EREFTIE 1099
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1100 ELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWT 1157
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1158 SVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR--GNHTQSAL-LAGLRKFVLYELQVLA 1214
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P + ++ + +D P + VF T++ + W P E G ++G
Sbjct: 1215 FTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1269
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1270 YQIAYRLASSSPHTFTTVEVGATVRQFT-ATDLAPESAYIFRLSAKTRQGWGEPLEATVI 1328
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + ++V E+ + + +
Sbjct: 1329 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSS 1388
Query: 547 IIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
I + A +VD L P Y +R+ A ++ GD SS
Sbjct: 1389 SI--SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSS 1425
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1759 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1812
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1813 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1863
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 78 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIH 137
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 138 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 195
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 196 -------TSGLHSFGRRLTISNPTSADTGPYVC 221
>gi|348537072|ref|XP_003456019.1| PREDICTED: protein sidekick-1-like [Oreochromis niloticus]
Length = 2128
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 149/595 (25%), Positives = 255/595 (42%), Gaps = 38/595 (6%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 60
GN +F C APKP W+K ++ SG + + ++G L + PVS DSG Y+C
Sbjct: 395 GNTALFTCQTNGAPKPAITWRKGSQVLASGSVQVPSFTLLQSGGLQVQPVSFQDSGEYTC 454
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G + L V + + P + L+C A + + ++Y W +
Sbjct: 455 IASNTEGTINATATLTVWNR-TVISVPPTDQRVIKGTTATLKCDATHDPRISISYKWERS 513
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G M + +++ GLL I+ D G+Y C V S G S + V P
Sbjct: 514 G-----MPVLPTSGGRVSVRQGLLTISQTWSGDIGDYTCTVTSQAGNDSRPARLEVIELP 568
Query: 181 GLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P + ++ + S + W P+ +Y + N NS W V EVD
Sbjct: 569 HSPRSLTARLNDSDSRSVLLSWLRPFDGNSPLLYYVLELSEN-NSPW-----KVYLSEVD 622
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
+ L P TY+F++ A N++G G+ S+ + + + P P I G
Sbjct: 623 PAVTKVSV---GGLTPARTYQFRLCAVNQVGRGQYSAETQRLMLREEAPSAPPKNIVASG 679
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEF 357
+ + W+P P + N Y + +R ++Q K + +
Sbjct: 680 RTNQSIMVQWQPPPEPQLNGVLRGYVLRYRLAGLPGDYQE---KNISSPETNYCLLKDLI 736
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T+Y+++V A G G S VT ++ + +P PQ V NST I TWNP
Sbjct: 737 IWTQYQIQVAAYTGAGLGVYSSPVTEYTLQGVPTAPPQEVQVVAINSTTIQFTWNPPP-- 794
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W E +PE+ + ++ ++R+ L+ GL+ T YY + +
Sbjct: 795 QQFINGINQGYKLLVWPEQSPEDVTIVTITPDYPSSRHTGLVSGLKKFTWYYGSTLCFTT 854
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+GP S L +T+ P + + I T++ V+W P + I GY + W
Sbjct: 855 PGDGPRSPPTLVQTHEDTPGR-VRRLSFTEILDTSLRVSW--AEPEDKNGIITGYMLW-W 910
Query: 535 EV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
EV + + SR ++ +TL + L+ Y ++V A + G G ++S I+
Sbjct: 911 EVPNVESSREERSL--SNSTLQYQLTGLTSTTVYTIQVAALTAAGRGVVTSSTIS 963
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 13/333 (3%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L P++ Y F++ N +G S+PS T P PS + L SW+PL
Sbjct: 1039 LTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSDLSLLSATQTSLRFSWKPL 1098
Query: 312 PREKQNAP--NIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+ N+ + Y++ R E ++E +K G A + + F T+Y+V++QA
Sbjct: 1099 SESEYNSSPETVGYRLRVSRTDGQGENRNEDVKGTGATSEATLEGLNPF--TQYQVQIQA 1156
Query: 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
N +GPGP S+ V +AE +P +P V + +S+ I + W+ + ++N G ++G+
Sbjct: 1157 FNSIGPGPWSQTVAAQTAESVPSGSPVNVTAEAVSSSKILLMWSALPQSQKN--GVILGY 1214
Query: 429 RIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
++ Y K+D+ +V L+ LQ T Y ++V+AY G+GP S L RT
Sbjct: 1215 KVLYSKKDSEGPPSVQVAEGEGSVSLLLGALQKYTVYVLQVLAYTRMGDGPPSNPILLRT 1274
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
P PP + + ++V V W+ P+ I+GY++ +D R T +
Sbjct: 1275 KEDVP-GPPVRMVFPEVRLSSVRVVWQ--PPASPNGIILGYQISYRLDSRDPQRW--TTV 1329
Query: 549 PVG-NTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
VG N + LS + Y R++A + G G
Sbjct: 1330 EVGSNARQFTVTGLSSEQSYVFRLIARTAVGWG 1362
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 184/442 (41%), Gaps = 54/442 (12%)
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-----E 177
R+ + D T + + +T S + + + ++ VG + + V+V E
Sbjct: 1317 RLDSRDPQRWTTVEVGSNARQFTVTGLSSEQSYVFRLIARTAVGWGAEQEAVVVTTERRE 1376
Query: 178 GP-PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHV 232
P P V EV + W G + P+ ++ + + +W + ++ +V
Sbjct: 1377 RPLPPRKLSVPQDEVESRQLRVHWVTGGSASSPLRYFTLQIKELPNGDWKTHTADIPHNV 1436
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
VDR L P+++Y+F+++A N++G PS + T D P + P
Sbjct: 1437 TSWTVDR------------LKPFTSYKFRMVATNDVGDSVPSRETEAATTLQDVPNEPPV 1484
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--NDTEFQSETLKEYGNVGIAV 350
+ + + W+ + N Y++++R+ N + ++ N A+
Sbjct: 1485 ILSVKPTTTTSVLVHWKRPSDDSVNGVLTGYRLYYRELPVNASTLTEAEVQTTKNNTSAL 1544
Query: 351 VRIPSEFY-----------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ S F + Y++ + + N +G P S V + E P VA
Sbjct: 1545 ITTKSTFKTVSSDSLTEFELTQLKKFRRYQIVMTSYNIIGESPPSNPVEVSVGEAAPSVA 1604
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTT 450
PQ + + + + VTW+ L +N G + G++I YW+ D E+ V ++ T
Sbjct: 1605 PQSITVSAVSPSTLEVTWDTPPLETQN--GLIQGYKIHYWERDQQNQSEKVKVIFVPDTR 1662
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ + L T Y V + A+N AG+GP S+ RT AP + PS + + +V
Sbjct: 1663 VH---LTNLSSYTSYLVTLTAFNTAGDGPPSDPRGARTLPSAPSQ-PSLLSFSEVTGGSV 1718
Query: 511 HVTWRY-VSPSFEEEPIIGYKV 531
+V+W +SP+ + E GY+V
Sbjct: 1719 NVSWGAPLSPNGQVE---GYRV 1737
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 3/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+ IP +T+Y ++Q +N VG P S + + + P P + T++
Sbjct: 1034 LEIPDLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSDLSLLSATQTSLRF 1093
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT-TRNWALIVGLQPDTKYYVK 468
+W P+ N +G+R++ + D E + T + A + GL P T+Y V+
Sbjct: 1094 SWKPLSESEYNSSPETVGYRLRVSRTDGQGENRNEDVKGTGATSEATLEGLNPFTQYQVQ 1153
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N+ G GP S+ +T P P V + ++ + + + W + S + I+G
Sbjct: 1154 IQAFNSIGPGPWSQTVAAQTAESVPSGSPVNVTAEAVSSSKILLMWSALPQSQKNGVILG 1213
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV + D + + G ++ + L Y ++VLA++ GDG S+P +
Sbjct: 1214 YKVLYSKKDSEGPPSVQVAEGEG-SVSLLLGALQKYTVYVLQVLAYTRMGDGPPSNPIL 1271
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 33/253 (13%)
Query: 359 YTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T Y+ ++ A NDVG P E+E T +D+P P + + +T++ V W
Sbjct: 1447 FTSYKFRMVATNDVGDSVPSRETEAATTL--QDVPNEPPVILSVKPTTTTSVLVHWK--R 1502
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN--WALIVG--------------- 458
+++ G L G+R+ Y + T +TT+N ALI
Sbjct: 1503 PSDDSVNGVLTGYRLYYRELPVNASTLTEAEVQTTKNNTSALITTKSTFKTVSSDSLTEF 1562
Query: 459 ----LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
L+ +Y + + +YN GE P S AP P ++ + ++P+T+ VTW
Sbjct: 1563 ELTQLKKFRRYQIVMTSYNIIGESPPSNPVEVSVGEAAPSVAPQSITVSAVSPSTLEVTW 1622
Query: 515 RYVSPSFEEEP--IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+P E + I GYK+ WE DQ +I V +T + +LS Y + +
Sbjct: 1623 D--TPPLETQNGLIQGYKIHYWERDQQNQSEKVKVIFVPDT-RVHLTNLSSYTSYLVTLT 1679
Query: 573 AFSNGGDGRMSSP 585
AF+ GDG S P
Sbjct: 1680 AFNTAGDGPPSDP 1692
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 8/173 (4%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
N I C P+P+ W KD + + R K+ L + V D GI+ C A N
Sbjct: 304 NAEIPCLAAGVPQPRIEWYKDTVPLSKLANPRYKVSAANGLTVRRVQPGDGGIFQCFARN 363
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +++ +L V + P T+ C T A W G ++
Sbjct: 364 PAGEAQAQTQLFVSSVAPTFASPPSDQTVTDGNTALFTC--QTNGAPKPAITW-RKGSQV 420
Query: 125 GNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P+ + G L++ SF D+GEY C+ +T G I+ T+ V
Sbjct: 421 --LASGSVQVPSFTLLQSGGLQVQPVSFQDSGEYTCIASNTEGTINATATLTV 471
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
I L P T+Y ++ N G P S L +T + AP PS + + T++ +W
Sbjct: 1036 IPDLTPFTQYRFRMQQVNIVGSSPMSAPSRLIQTLQAAPDTHPSDLSLLSATQTSLRFSW 1095
Query: 515 RYVSPS-FEEEP-IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ +S S + P +GY++RV D N+ + G T +A + L+P +Y +++
Sbjct: 1096 KPLSESEYNSSPETVGYRLRVSRTDGQGENRNEDVKGTGATSEATLEGLNPFTQYQVQIQ 1155
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSA---STTLLLVMSSTL 619
AF++ G G S + Q E SGSP +A S++ +L+M S L
Sbjct: 1156 AFNSIGPGPWSQ-TVAAQTAE--SVPSGSPVNVTAEAVSSSKILLMWSAL 1202
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFV--WKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G + C A P + + WK+DG + SG R L+I + D+G+Y C A
Sbjct: 214 GNEAILECIANARPVDRLLVSWKRDGRRLSSGQR--------LIIPAPTSSDTGLYVCEA 265
Query: 63 TNVHGMD---ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
+ + E+K L V+ PS Q KI RN ++ C A + W
Sbjct: 266 SFSNSTAKPVEAKAHLTVMEPPSLTAQPKSKIFGELDRNAEIPCLAAGVPQPRIE--WYK 323
Query: 120 NGVRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ V L++L P + L + D G ++C ++ G+ +T + V
Sbjct: 324 DTV-----PLSKLANPRYKVSAANGLTVRRVQPGDGGIFQCFARNPAGEAQAQTQLFV 376
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 132/334 (39%), Gaps = 28/334 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
Y+ + + N +G PS+P + + P AP I L ++W+ P E QN
Sbjct: 1573 YQIVMTSYNIIGESPPSNPV-EVSVGEAAPSVAPQSITVSAVSPSTLEVTWDTPPLETQN 1631
Query: 318 APNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376
YKI +W + D + QSE +K V V + + YT Y V + A N G GP
Sbjct: 1632 GLIQGYKIHYWER--DQQNQSEKVKVI-FVPDTRVHLTNLSSYTSYLVTLTAFNTAGDGP 1688
Query: 377 ESE---VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKY 432
S+ T+ SA P + + G ++NV+W P+ + G++ G+R+ Y
Sbjct: 1689 PSDPRGARTLPSAPSQPSLLSFSEVTGG----SVNVSWGAPL-----SPNGQVEGYRVIY 1739
Query: 433 WKEDNPEETAVYYLSRTTR----NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
+ P + ++ + W + L Y V A P +
Sbjct: 1740 -EPTAPIQGVTKLVTVDVKGSWQRWLKVRDLIKGATYTFSVQALTVNYGPPIQANITAQP 1798
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
+ +P P I T+ +T ++ E P+ GY + D+ + + +
Sbjct: 1799 VKGSPGSP----MDMSITKTSSDLTIQWSEGDVGEAPVTGYTIEARPSDEGVWDSFIKFL 1854
Query: 549 PVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
P + + + L G Y RV+A ++ G G+
Sbjct: 1855 PPSSRSASVPLERLRSGISYEFRVIAVNSYGYGQ 1888
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 31/148 (20%)
Query: 160 VVKSTVGKISTKTTVIVEGPP-----------GLPGGVQVVEVHKTSA--TIQWTDGATN 206
++K S + + GPP G PG + + KTS+ TIQW++G
Sbjct: 1769 LIKGATYTFSVQALTVNYGPPIQANITAQPVKGSPGSPMDMSITKTSSDLTIQWSEGDVG 1828
Query: 207 GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS------TYEF 260
P+T Y I AR + W D + S + VP +YEF
Sbjct: 1829 EAPVTGYTIEARPSDEGVW------------DSFIKFLPPSSRSASVPLERLRSGISYEF 1876
Query: 261 KVIAGNELGYGEPSSPSPQYNTPADKPY 288
+VIA N GYG+PS+PS +D+P+
Sbjct: 1877 RVIAVNSYGYGQPSAPSAALAAMSDRPF 1904
>gi|355747487|gb|EHH51984.1| Protein sidekick-1, partial [Macaca fascicularis]
Length = 2035
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 253/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 395 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 454
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 455 CYAANTEGSLNASATLTVWNQTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 513
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 514 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVIEL 569
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W PI +Y I+ + NS W V +G E+
Sbjct: 570 PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 627
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 628 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 680
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 681 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 737
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 738 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 796
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 797 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 855
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 856 PGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 910
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 911 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSSTIS 964
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 230/609 (37%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 305 TVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 364
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 365 EGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 424
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 425 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNQ 475
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T+AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 476 TSIVHPPEDHVV-IKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 532
Query: 238 DRYTGRKEASIENVLVPWS------TYEFKVIAGNELGYGE------PSSPSPQYNTPAD 285
+ WS T E GN+ P SP +P
Sbjct: 533 SLLISQT----------WSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNS 582
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY I +N++ ++
Sbjct: 583 SHSHA-------------VVLSWVRPF---DGNSPILYY-IVELSENNSPWKVH----LS 621
Query: 345 NVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
NVG + V + Y+ +V A+N+VG G S E + E+ P P+ + + G
Sbjct: 622 NVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 681
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 682 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 739
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W F
Sbjct: 740 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQF 799
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P I +L Y VL F+ GDG
Sbjct: 800 INGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDG 859
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 860 PPSTPQLVW 868
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 158/362 (43%), Gaps = 33/362 (9%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
EV S +QW G+ PI ++ + R W S + R+ A I
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSI------RHAA--TACIV 1442
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P+++Y+ ++ A N++G + SS + T D P + P + + I W+
Sbjct: 1443 DRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQ 1502
Query: 310 PLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIAVVRI 353
P E N Y+I++R+ + + +++TLK + V +
Sbjct: 1503 PPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTST 1562
Query: 354 PSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
E Y YEV + A N +G P S V +F E P +APQ V ++ + V
Sbjct: 1563 MCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1622
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW+P +N G + G++I YW+ D+ +T + + L T+Y V +
Sbjct: 1623 TWDPPPPESQN--GNIQGYKIYYWEADSQNDTEKMKVLFLPEPVVRLKNLTSHTEYLVSI 1680
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N AG+GP S+ RT++ AP PS + I TT++V+W P+ + GY
Sbjct: 1681 SAFNAAGDGPRSDPRQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGILQGY 1737
Query: 530 KV 531
+V
Sbjct: 1738 RV 1739
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 168/415 (40%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 871 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 926
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 927 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGAGLVTSSTISSGVPPDLP-GAPSNL 978
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 979 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1038
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1039 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1098
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1099 LPDSQYNGNPESVGYRIKYWRSDLQSSALAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1158
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1159 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1218
Query: 534 WEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D + T+ GN T A + L Y ++VLAF+ G+G S P I
Sbjct: 1219 RAKDLDPEPRSHTV--RGNYTQSALLAGLRKFVLYELQVLAFTRIGNGVPSMPLI 1271
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 188/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 957 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1012
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1013 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1065
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1066 RVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1121
Query: 335 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
QS L + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1122 LQSSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRES 1176
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1177 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHTVRG 1234
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P LERT AP PP + +
Sbjct: 1235 NYTQSALLAGLRKFVLYELQVLAFTRIGNGVPSMPLILERTKDDAP-GPPVRLVFPEVRL 1293
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1294 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAP 1346
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1347 ESAYIFRLSAKTRQGWG 1363
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 182/461 (39%), Gaps = 49/461 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P + EV TS I W I Y+I R +S+ + +G V +
Sbjct: 1280 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLA-SSSPHTFTTVEVGATVRQ 1338
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+T L P S Y F++ A G+GEP + ++P P +
Sbjct: 1339 FTATD-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQA 1390
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ--SETLKEYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q S +++ I P
Sbjct: 1391 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSIRHAATACIVDRLRP--- 1447
Query: 358 YYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T Y+++++A ND+G SE + + +D+P P V + ++++ + W P
Sbjct: 1448 -FTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPR- 1505
Query: 417 IRENIRGRLIGHRIKYWKED------------------NPEETAVYYL----SRTTRNWA 454
E++ G L G+RI Y + + E TA S +T
Sbjct: 1506 -DESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKTVNSSSTSTMC 1564
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ L+ +Y V + AYN GE P S AP P V + + + + VTW
Sbjct: 1565 ELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTW 1624
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
P + I GYK+ WE D ++ + + + +L+ Y + + AF
Sbjct: 1625 DPPPPESQNGNIQGYKIYYWEADSQNDTEKMKVLFLPEPV-VRLKNLTSHTEYLVSISAF 1683
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
+ GDG S P + G + G+P+ + STTL
Sbjct: 1684 NAAGDGPRSDP----RQGRTHQAAPGAPSFLAFSEITSTTL 1720
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWN 222
S++ ++ PP + P V V +TS ++W D NG P + Y+I R++
Sbjct: 1064 SSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQ 1123
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
S+ V+ ++R E +IE + YE ++ A N +G G P S + T
Sbjct: 1124 SSAL---AQVVSDRLER-----EFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1173
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S T++
Sbjct: 1174 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHTVR 1233
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P ++ + +D P + VF
Sbjct: 1234 --GNYTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSMPLILERTKDDAPGPPVRLVFPE 1290
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1291 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1344
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1345 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1404
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I T A IVD L P Y +R+ A ++ G
Sbjct: 1405 SDGASPIRYFTVQVRELPRGEWQTYSSSIRHAAT--ACIVDRLRPFTSYKLRLKATNDIG 1462
Query: 579 DGRMSS 584
D SS
Sbjct: 1463 DSDFSS 1468
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1802 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1855
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1856 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1906
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 133/624 (21%), Positives = 222/624 (35%), Gaps = 123/624 (19%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 121 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIH 180
Query: 78 LH-----------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
L P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 181 LSIARDIGTPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI 238
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 239 ---------TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPPY 289
Query: 182 LPGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ + SA ++ T G P+ + W+ + + +
Sbjct: 290 FTAEPE----SRISAEVEETVDIRCQAMGVPLPTLQ----------WYKDAISISRLQNP 335
Query: 239 RYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT-PADKPYQA 290
RY + L P + F+ A NE G Y + ++ +P + PAD
Sbjct: 336 RYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPAD----- 390
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN------DTEFQSETLKEYG 344
+ + G I +S P P I W+++N L E G
Sbjct: 391 -TTVTDGMTAILRCEVSGAPKP-----------AITWKRENHILASGSVRIPRFMLLESG 438
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
+ IA V I YT Y A N G S +T+++ + V +G +
Sbjct: 439 GLQIAPVFIQDAGNYTCY-----AANTEGSLNASATLTVWNQTSIVHPPEDHVVIKGTTA 493
Query: 405 TA-INVTWNPIELIRENIRGRLIGHRIKYWKEDN----PEETAVYYLSR-----TTRNWA 454
T T +P R ++R WK+DN P T+ + + ++ W+
Sbjct: 494 TLHCGATHDP----RVSLR--------YVWKKDNVALTPSSTSRIVVEKDGSLLISQTWS 541
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH--- 511
+G Y ++++ EG R + P P + + +P + H
Sbjct: 542 GDIG-----DYTCEIVS-----EGGNDSRMARLEVIELPHSPQNLL----ASPNSSHSHA 587
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMR 570
V +V P PI+ Y V E+ ++ S + VG + V L+P + Y R
Sbjct: 588 VVLSWVRPFDGNSPILYYIV---ELSENNSPWKVHLSNVGPEMTGVTVSGLTPARTYQFR 644
Query: 571 VLAFSNGGDGRMSSPAITFQMGEE 594
V A + G G+ S+ + EE
Sbjct: 645 VCAVNEVGRGQYSAETSRLMLPEE 668
>gi|297287847|ref|XP_001105243.2| PREDICTED: protein sidekick-1-like [Macaca mulatta]
Length = 2138
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 159/599 (26%), Positives = 253/599 (42%), Gaps = 43/599 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 436 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 495
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 496 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 554
Query: 120 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ N+ L T I + DG LL I+ D G+Y C + S G S + V
Sbjct: 555 D-----NVALTPSSTSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVI 608
Query: 178 GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + H + + W PI +Y I+ + NS W V +G
Sbjct: 609 ELPHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGP 666
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
E+ T L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 667 EMTGVT-------VGGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIV 719
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 720 ASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVT 776
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 777 DLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPP 836
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAY 472
++ I G G+++ W D PE V ++ + + L+ T Y+ V+ +
Sbjct: 837 P--QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHVTNLKKFTAYFTSVLCF 894
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYK 530
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY+
Sbjct: 895 TTPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQ 949
Query: 531 VRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 950 IS-WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAALTAVGAGLLTSSTIS 1005
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 151/609 (24%), Positives = 230/609 (37%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 346 TVDIRCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 405
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 406 EGGEIQTHTYLDVTNIAPVFTQRPADTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 465
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 466 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 516
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T+AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 517 TSIVHPPEDHVV-IKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 573
Query: 238 DRYTGRKEASIENVLVPWS------TYEFKVIAGNELGYGE------PSSPSPQYNTPAD 285
+ WS T E GN+ P SP +P
Sbjct: 574 SLLISQT----------WSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNS 623
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY I +N++ ++
Sbjct: 624 SHSHA-------------VVLSWVRPF---DGNSPILYY-IVELSENNSPWKVH----LS 662
Query: 345 NVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
NVG + V + Y+ +V A+N+VG G S E + E+ P P+ + + G
Sbjct: 663 NVGPEMTGVTVGGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 722
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 723 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 780
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W F
Sbjct: 781 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQF 840
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P + +L Y VL F+ GDG
Sbjct: 841 INGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHVTNLKKFTAYFTSVLCFTTPGDG 900
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 901 PPSTPQLVW 909
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 27/349 (7%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1432 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACIVDR------ 1485
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1486 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1539
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
I W+P E N Y+I++R+ + + +++TLK + + + Y Y
Sbjct: 1540 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTDLKK---YRRY 1596
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EV + A N +G P S V +F E P +APQ V ++ + VTW+P +N
Sbjct: 1597 EVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQN-- 1654
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
G + G++I YW+ D+ +T + + L T+Y V + A+N AG+GP S+
Sbjct: 1655 GNIQGYKIYYWEADSQNDTEKMKVLFLPEPVVRLKNLTSHTEYLVSISAFNAAGDGPRSD 1714
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
RT++ AP PS + I TT++V+W P+ + GY+V
Sbjct: 1715 PRQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGILQGYRV 1760
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 169/415 (40%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 912 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 967
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 968 STTHEYKIQGLSSL-------TTYTIDVAALTAVGAGLLTSSTISSGVPPDLP-GAPSNL 1019
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1020 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1079
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1080 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1139
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1140 LPDSQYNGNPESVGYRIKYWRSDLQSSALAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1199
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1200 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1259
Query: 534 WEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D + T+ GN T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1260 RAKDLDPEPRSHTV--RGNYTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1312
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 188/435 (43%), Gaps = 54/435 (12%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1000 TSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG------ 1053
Query: 227 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1054 -----AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRV 1108
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 336
T P AP+ + L + W PLP + N ++ Y+I +WR ++ Q
Sbjct: 1109 IQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SDLQ 1164
Query: 337 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
S L + + R+ EF + EYE+++QA N VG GP SEVV + E +P
Sbjct: 1165 SSALAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVP 1219
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1220 SAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHTVRGNY 1277
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + + T+
Sbjct: 1278 TQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRLTS 1336
Query: 510 VHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 565
V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1337 VRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAPES 1389
Query: 566 RYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1390 AYIFRLSAKTRQGWG 1404
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 191/470 (40%), Gaps = 35/470 (7%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1293 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1352
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1353 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1404
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1405 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1463
Query: 332 DTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAED 388
E+Q S ++ I P +T Y+++++A ND+G SE + + +D
Sbjct: 1464 RGEWQTYSSSISHEATACIVDRLRP----FTSYKLRLKATNDIGDSDFSSETEAVTTLQD 1519
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE---TAVYY 445
+P P V + ++++ + W P E++ G L G+RI Y++E E T
Sbjct: 1520 VPGEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRELEYEAGSGTEAKT 1576
Query: 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 505
L A + L+ +Y V + AYN GE P S AP P V + +
Sbjct: 1577 LKSPIALRAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPL 1636
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 565
+ + VTW P + I GYK+ WE D ++ + + + +L+
Sbjct: 1637 TASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNDTEKMKVLFLPEPV-VRLKNLTSHT 1695
Query: 566 RYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
Y + + AF+ GDG S P + G + G+P+ + STTL
Sbjct: 1696 EYLVSISAFNAAGDGPRSDP----RQGRTHQAAPGAPSFLAFSEITSTTL 1741
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1823 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1876
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE+GYGEPSSPS + + P+
Sbjct: 1877 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEVGYGEPSSPSTAVSAQVEAPF 1927
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 133/623 (21%), Positives = 222/623 (35%), Gaps = 122/623 (19%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 163 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPFIH 222
Query: 78 LH----------GPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
L P+ +PP + +A L C A + D++ W NGVRI
Sbjct: 223 LSIANIGTPETTAPTIV--VPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI- 279
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPGL 182
T ++ G L I+N + AD G Y C ++ S K + + PP
Sbjct: 280 --------TSGLHSFGRRLTISNPTSADTGLYVCEAALLGSAFEPARAKAFLFITEPPYF 331
Query: 183 PGGVQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
+ + SA ++ T G P+ + W+ + + + R
Sbjct: 332 TAEPE----SRISAEVEETVDIRCQAMGVPLPTLQ----------WYKDAISISRLQNPR 377
Query: 240 YTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT-PADKPYQAP 291
Y + L P + F+ A NE G Y + ++ +P + PAD
Sbjct: 378 YKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPAD------ 431
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN------DTEFQSETLKEYGN 345
+ + G I +S P P I W+++N L E G
Sbjct: 432 TTVTDGMTAILRCEVSGAPKP-----------AITWKRENHILASGSVRIPRFMLLESGG 480
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ IA V I YT Y A N G S +T+++ + V +G +T
Sbjct: 481 LQIAPVFIQDAGNYTCY-----AANTEGSLNASATLTVWNRTSIVHPPEDHVVIKGTTAT 535
Query: 406 A-INVTWNPIELIRENIRGRLIGHRIKYWKEDN----PEETAVYYLSR-----TTRNWAL 455
T +P R ++R WK+DN P T+ + + ++ W+
Sbjct: 536 LHCGATHDP----RVSLR--------YVWKKDNVALTPSSTSRIVVEKDGSLLISQTWSG 583
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH---V 512
+G Y ++++ EG R + P P + + +P + H V
Sbjct: 584 DIG-----DYTCEIVS-----EGGNDSRMARLEVIELPHSPQNLL----ASPNSSHSHAV 629
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRV 571
+V P PI+ Y V E+ ++ S + VG + V L+P + Y RV
Sbjct: 630 VLSWVRPFDGNSPILYYIV---ELSENNSPWKVHLSNVGPEMTGVTVGGLTPARTYQFRV 686
Query: 572 LAFSNGGDGRMSSPAITFQMGEE 594
A + G G+ S+ + EE
Sbjct: 687 CAVNEVGRGQYSAETSRLMLPEE 709
>gi|119220552|ref|NP_689957.3| protein sidekick-1 isoform 1 [Homo sapiens]
gi|296452965|sp|Q7Z5N4.3|SDK1_HUMAN RecName: Full=Protein sidekick-1; Flags: Precursor
Length = 2213
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 253/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 493 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 552
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 553 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 611
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 612 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 667
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + V H + + W PI +Y I+ + NS W V +G E+
Sbjct: 668 PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 725
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 726 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 778
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 779 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 835
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 836 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 894
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 895 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 953
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 954 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 1008
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1009 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTIS 1062
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 158/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKT 1652
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1712
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1713 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1770
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1771 HTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1827
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1828 ANGILQGYRV 1837
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 151/614 (24%), Positives = 228/614 (37%), Gaps = 81/614 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 403 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 462
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 522
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT------- 172
VRI L ++ G L+I DAG Y C +T G ++
Sbjct: 523 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 573
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
T IV P V + T+AT+ GAT+ ++ + + N T + S V
Sbjct: 574 TSIVHPPE------DHVVIKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIV 625
Query: 233 IGKEVDRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQY 280
+ K+ + WS Y ++++ GN+ P SP
Sbjct: 626 VEKDGSLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLL 675
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+P A + +SW P N+P +YY + + N S
Sbjct: 676 VSPNSSHSHA-------------VVLSWVRPF---DGNSPILYYIVELSENN-----SPW 714
Query: 340 LKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG 396
NVG + V + Y+ +V A+N+VG G S E + E+ P P+
Sbjct: 715 KVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKN 774
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+ + G + +I V W P N G L G+ ++Y P E ++ N+ L+
Sbjct: 775 IVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLV 832
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L T+Y ++V AYN AG G S E T + P PP V + +N TT+ W
Sbjct: 833 TDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNP 892
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFS 575
F GYK+ W D + TI P I +L Y VL F+
Sbjct: 893 PPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFT 952
Query: 576 NGGDGRMSSPAITF 589
GDG S+P + +
Sbjct: 953 TPGDGPPSTPQLVW 966
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 167/416 (40%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 969 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 1024
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1025 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGTGLVTSSTISSGVPPDLP-GAPSNL 1076
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E ++ IP
Sbjct: 1077 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1136
Query: 355 SEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YT Y +++ +N VGP P S V+ A P VAP V R + T++ + W
Sbjct: 1137 NLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAP--PDVAPTSVTVRTASETSLRLRW 1194
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+RIKYW+ D +S I L+ +Y +++ A
Sbjct: 1195 VPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA 1254
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1255 FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKI 1314
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1315 LFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1369
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 278 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 333
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 334 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRE 1273
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1274 SVPSAAPENVSAEAVSSTQILLTWTSVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVR 1331
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1332 GNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVR 1390
Query: 507 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLS 562
T+V + W+ EEP I+GY++ S T + VG T+ DL+
Sbjct: 1391 LTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLA 1443
Query: 563 PGKRYHMRVLAFSNGGDG 580
P Y R+ A + G G
Sbjct: 1444 PESAYIFRLSAKTRQGWG 1461
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 195/488 (39%), Gaps = 51/488 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELP 1520
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1578
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--------------D 436
P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1579 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRELEYEAGSGTEAKTLK 1635
Query: 437 NP-----EETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
NP E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1636 NPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547
AP P V + + + + VTW P + I GYK+ WE D +
Sbjct: 1696 VGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKV 1755
Query: 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS- 606
+ + + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1756 LFLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPKSDP----QQGRTHQAAPGAPSFLAF 1810
Query: 607 ---ASTTL 611
STTL
Sbjct: 1811 SEITSTTL 1818
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 35/459 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1129 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASET 1188
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 249
S ++W D NG P + Y+I W S ++ + + V DR +E +IE
Sbjct: 1189 SLRLRWVPLPDSQYNGNPESVGYRI---KYWRS---DLQSSAVAQVVSDRL--EREFTIE 1240
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1241 ELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWT 1298
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1299 SVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR--GNHTQSAL-LAGLRKFVLYELQVLA 1355
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P + ++ + +D P + VF T++ + W P E G ++G
Sbjct: 1356 FTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1410
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1411 YQIAYRLASSSPHTFTTVEVGATVRQFT-ATDLAPESAYIFRLSAKTRQGWGEPLEATVI 1469
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + ++V E+ + + +
Sbjct: 1470 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSS 1529
Query: 547 IIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
I + A +VD L P Y +R+ A ++ GD SS
Sbjct: 1530 SI--SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSS 1566
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIH 278
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 279 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 336
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 337 -------TSGLHSFGRRLTISNPTSADTGPYVC 362
>gi|444526051|gb|ELV14260.1| Neuronal cell adhesion molecule [Tupaia chinensis]
Length = 796
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 225/508 (44%), Gaps = 50/508 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDS----GIYS 59
N+ I C + P P F W ++G + +G L+I+ +S + G+Y
Sbjct: 52 NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGSGTLVINIMSEGKAETYEGVYQ 111
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEE-----LLDV 113
CTA N G S ++ PS E TIAA+ + + + + E L
Sbjct: 112 CTARNERGAAVSNNIVVR---PSMDEL---NDTIAANLSDTEFYGAKSSRERPPTFLTPE 165
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
+R + L + ID L + + D G Y CV +T+ +S
Sbjct: 166 GNASNKEELRGNVLSLECIAEGLFTIDKDHLVVADVIDDDGGTYTCVANTTLDNVSASAV 225
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEH 231
+ V P P +++ S + WT G N PIT + I + W + +E
Sbjct: 226 LSVVDAPNPPFDLELTNQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHEAGLWHHQTE- 284
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
V G + + + L P+ Y F+V+A N +G PS S QY T A +P + P
Sbjct: 285 VPGTQT---------TAQLKLSPYVNYSFRVMAVNGIGSSLPSEASEQYFTKAAEPDKNP 335
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAV 350
+ + G G + +L I+W+PL N P + YK+ WR+K+ D E+ S + NV +
Sbjct: 336 TAVEGLGSEPDNLVITWKPLNGFDSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYI 392
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
V F Y +KVQA+NDVG PE VV S ED+P VAP V NST V
Sbjct: 393 VSGTPTF--VPYLIKVQALNDVGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVH 450
Query: 411 WNPIELIRENIRGRLIGHR--IKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPD 462
W+P+ L ++IRG L G+R I YWK + + ++ + ++ ++ GL+P
Sbjct: 451 WDPVPL--KSIRGHLQGYRASIYYWKAQSSSKRHRRHVEKKILTFQGSKTHGMLPGLEPF 508
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYR 490
+ Y + V N GEGP S L+R +
Sbjct: 509 SHYTLNVRVVNGKGEGPAS---LDRVFH 533
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 12/233 (5%)
Query: 359 YTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
Y Y +V A+N +G SE F+ P P V G + +TW P+
Sbjct: 299 YVNYSFRVMAVNGIGSSLPSEASEQYFTKAAEPDKNPTAVEGLGSEPDNLVITWKPLNGF 358
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
N G + +++ + ++D +E ++ ++ ++ G Y +KV A N+ G
Sbjct: 359 DSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPTFVPYLIKVQALNDVGF 414
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV--WE 535
PE + + P P V + +N T V W V + GY+ + W+
Sbjct: 415 APEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRASIYYWK 474
Query: 536 VDQDMSR-----ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
R + G+ + L P Y + V + G+G S
Sbjct: 475 AQSSSKRHRRHVEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEGPAS 527
>gi|32351274|gb|AAP75619.1| sidekick-like protein 1 [Homo sapiens]
Length = 2213
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 253/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 493 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 552
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 553 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 611
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 612 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 667
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + V H + + W PI +Y I + NS+ + V +G E+
Sbjct: 668 PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY--IVELSENSSPWKVHLSNVGPEM 725
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 726 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 778
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 779 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 835
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 836 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 894
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 895 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 953
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 954 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 1008
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1009 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTIS 1062
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 158/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALXAELTAQSSFKT 1652
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1712
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1713 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1770
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1771 HTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1827
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1828 ANGILQGYRV 1837
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 167/416 (40%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 969 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 1024
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1025 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGTGLVTSSTISSGVPPDLP-GAPSNL 1076
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E ++ IP
Sbjct: 1077 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1136
Query: 355 SEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YT Y +++ +N VGP P S V+ A P VAP V R + T++ + W
Sbjct: 1137 NLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAP--PDVAPTSVTVRTASETSLRLRW 1194
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+RIKYW+ D +S I L+ +Y +++ A
Sbjct: 1195 VPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA 1254
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1255 FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKI 1314
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1315 LFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1369
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 278 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 333
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 334 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRE 1273
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1274 SVPSAAPENVSAEAVSSTQILLTWTSVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVR 1331
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1332 GNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVR 1390
Query: 507 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLS 562
T+V + W+ EEP I+GY++ S T + VG T+ DL+
Sbjct: 1391 LTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLA 1443
Query: 563 PGKRYHMRVLAFSNGGDG 580
P Y R+ A + G G
Sbjct: 1444 PESAYIFRLSAKTRQGWG 1461
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N+VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 739 YQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 798
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 799 --GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVF 856
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TT+ W F GYK+ W D
Sbjct: 857 SRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADAPE 916
Query: 541 SRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ TI P I +L Y VL F+ GDG S+P + +
Sbjct: 917 AVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVW 966
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 195/488 (39%), Gaps = 51/488 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELP 1520
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1578
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--------------D 436
P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1579 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRELEYEAGSGTEAKTLK 1635
Query: 437 NP-----EETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
NP E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1636 NPIALXAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547
AP P V + + + + VTW P + I GYK+ WE D +
Sbjct: 1696 VGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKV 1755
Query: 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS- 606
+ + + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1756 LFLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPKSDP----QQGRTHQAAPGAPSFLAF 1810
Query: 607 ---ASTTL 611
STTL
Sbjct: 1811 SEITSTTL 1818
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 35/459 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1129 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASET 1188
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 249
S ++W D NG P + Y+I W S ++ + + V DR +E +IE
Sbjct: 1189 SLRLRWVPLPDSQYNGNPESVGYRI---KYWRS---DLQSSAVAQVVSDRL--EREFTIE 1240
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1241 ELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWT 1298
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1299 SVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR--GNHTQSAL-LAGLRKFVLYELQVLA 1355
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P + ++ + +D P + VF T++ + W P E G ++G
Sbjct: 1356 FTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1410
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1411 YQIAYRLASSSPHTFTTVEVGATVRQFT-ATDLAPESAYIFRLSAKTRQGWGEPLEATVI 1469
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + ++V E+ + + +
Sbjct: 1470 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSS 1529
Query: 547 IIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
I + A +VD L P Y +R+ A ++ GD SS
Sbjct: 1530 SI--SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSS 1566
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 67/177 (37%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 403 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 462
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 522
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 523 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTV 570
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIH 278
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 279 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 336
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 337 -------TSGLHSFGRHLTISNPTSADTGPYVC 362
>gi|326928941|ref|XP_003210631.1| PREDICTED: protein sidekick-1-like, partial [Meleagris gallopavo]
Length = 2091
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 160/604 (26%), Positives = 251/604 (41%), Gaps = 37/604 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
EG + C APKP WKK I+ SG R + E+G L I+PV D+G Y+
Sbjct: 428 EGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFILLESGGLQITPVFLQDAGNYT 487
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + ++ P T+ LRC A + + + Y+W
Sbjct: 488 CHAVNSEGALNAFVMLTVWNR-TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKK 546
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG LL I+ D G+Y C V S G S + V
Sbjct: 547 DSVVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIEL 602
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + + S + W P+ +Y + N NS W +
Sbjct: 603 PHSPQNLLAILNSSYSRSVVLSWVRPFDGNSPVLYYMVEVSEN-NSPW--------KVHL 653
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ + + L P TY+F+V A N++G G+ SS + + P + P P I
Sbjct: 654 SNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVAS 713
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q K + I +
Sbjct: 714 GRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDL 770
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V + N G G S VT ++ + +P PQ V NST I W+P
Sbjct: 771 IIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWSPPP- 829
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D P V ++ + I L+ T YY V+ +
Sbjct: 830 -QQFINGINQGYKLLAWPVDAPGTVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTT 888
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT KP + H+ I T++ V+W+ P + I GY++
Sbjct: 889 PGDGPRSAPQLLRTLE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIITGYQLS 943
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
WEV + + T TL+ I LS Y + V A + G G ++S I+ +
Sbjct: 944 -WEV-YGRNESRLTRTLTNTTLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTISSGVP 1001
Query: 593 EEKE 596
EKE
Sbjct: 1002 PEKE 1005
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 159/365 (43%), Gaps = 39/365 (10%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V S + W G+ PI ++ + R + W S + + + I
Sbjct: 1409 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPDGDWQTYSSSI--------SHEATSCII 1460
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+ +V A N++G + S+ + T D P + P + + + W+
Sbjct: 1461 ESLNPFTSYKLRVKATNDIGDSDFSAETEAVTTLQDVPDEPPGSVLVTPHTTSSVLVQWQ 1520
Query: 310 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------NVGIA 349
P E N + Y+I++R+ +N + ++E + + +
Sbjct: 1521 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVRNPSALRAELTPQSSFKTVNSSSALT 1580
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ Y YEV + A N +G P S V +F E P +APQ + +++ + +
Sbjct: 1581 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLEL 1640
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKED---NPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
TW+P +N G + G++I YW+ D + E+ V +L TT + L T+Y
Sbjct: 1641 TWDPPPADSQN--GNIQGYKIYYWESDVQNDTEKVKVLFLPETT---VRLKNLTSHTRYL 1695
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
V + A+N AG+GP S RT++ AP PS + I TT++V+W P+ +
Sbjct: 1696 VCISAFNAAGDGPRSRPSAGRTHQAAPSA-PSFLAFSEITSTTLNVSWG--EPTAANGVL 1752
Query: 527 IGYKV 531
GY+V
Sbjct: 1753 QGYRV 1757
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 162/360 (45%), Gaps = 24/360 (6%)
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
E V EVD + + N L P++ Y F++ N +G S PS T P
Sbjct: 1037 EWVSLHEVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDV 1095
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNV 346
APS + L + W PLP + N ++ Y+I FWR + Q L + N
Sbjct: 1096 APSSVSVRTASESSLQMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSALLKVIND 1151
Query: 347 GIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ I +TEYE+++QA N +G GP SEVV + E +P P+ V + +ST
Sbjct: 1152 RLERECTIEDLEEWTEYELQIQAFNAIGAGPWSEVVRGRTRESVPSAPPENVSAEAVSST 1211
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
I +TW+ + +N G ++G++I Y +D E + L+ GL+ Y
Sbjct: 1212 QILLTWSAVPESEQN--GLILGYKILYKAKDLDSEPRSQTVRGNHTQSCLLSGLRKYVLY 1269
Query: 466 YVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
++V+A+ G+G P S +ERT AP PP + + T+V + W+ EE
Sbjct: 1270 EIRVLAFTRIGDGVPSSPAVIERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP-----PEE 1323
Query: 525 P---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDG 580
P I+GY++ ++ T + VG+T+ DL+P Y R A + G G
Sbjct: 1324 PNGIILGYQIAYRLASSSPNKF--TTVEVGSTVRQFTATDLTPESAYIFRTSAKTRQGWG 1381
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 4/240 (1%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ +P+ YT Y +++ +N VG P S+ + + + P VAP V R + +++
Sbjct: 1052 MLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPSSVSVRTASESSLQ 1111
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIK+W+ D + ++ I L+ T+Y ++
Sbjct: 1112 MRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLKVINDRLERECTIEDLEEWTEYELQ 1171
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP SE RT P PP V + ++ T + +TW V S + I+G
Sbjct: 1172 IQAFNAIGAGPWSEVVRGRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILG 1231
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D + T+ GN + ++ L Y +RVLAF+ GDG SSPA+
Sbjct: 1232 YKILYKAKDLDSEPRSQTV--RGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPAV 1289
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 174/437 (39%), Gaps = 51/437 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1298 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1355
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T L P S Y F+ A G+GEP + + P P ++
Sbjct: 1356 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKREAP-GPPQQLTTPQ 1407
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ S+ +P ++P Y+ + R+ D ++Q+ + ++ + F
Sbjct: 1408 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPDGDWQTYSSSISHEATSCIIESLNPF- 1466
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++V+A ND+G E+E VT +D+P P V ++++ V W P +
Sbjct: 1467 -TSYKLRVKATNDIGDSDFSAETEAVTTL--QDVPDEPPGSVLVTPHTTSSVLVQWQPPK 1523
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDT----------- 463
E++ G L+G+RI Y + D +A S+ RN AL L P +
Sbjct: 1524 A--ESLNGLLLGYRIYYRELDYDAGSATE--SKAVRNPSALRAELTPQSSFKTVNSSSAL 1579
Query: 464 ------------KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+Y V + AYN GE P S AP P + + ++ + +
Sbjct: 1580 TTYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLE 1639
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
+TW + I GYK+ WE D D + +P + +L+ RY +
Sbjct: 1640 LTWDPPPADSQNGNIQGYKIYYWESDVQNDTEKVKVLFLP---ETTVRLKNLTSHTRYLV 1696
Query: 570 RVLAFSNGGDGRMSSPA 586
+ AF+ GDG S P+
Sbjct: 1697 CISAFNAAGDGPRSRPS 1713
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 175 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ GP G PG Q + V K+++ T+QWT+G + +P T Y I AR + W
Sbjct: 1814 VTAGPAEGSPGSPQEILVTKSASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----D 1868
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ K++ R S++ L TYEF+V+A NE GYGEPS PS
Sbjct: 1869 MFVKDIPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPS 1913
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG+ I R I L+I S D+G Y A N + LI
Sbjct: 154 PRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVVDAGDYYVQAVNEKNGENKTSPLIH 213
Query: 78 LHGPSYYEQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L S + +PP+ T +A + L C A + ++ +W NG++I
Sbjct: 214 LSVASAMDPSDTTAPIIVIPPQNTSVVAGSSEVTLECVASARPVERLSIMWKRNGIKI-- 271
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL- 182
T I+ G L ITN + AD G Y C K ST K + + PP
Sbjct: 272 -------TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMEPPYFT 324
Query: 183 --PGGVQVVEVHK 193
P V + EV K
Sbjct: 325 VEPESVILAEVEK 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P P VW KD + R K+ +G L I + D+GI+ C A+N
Sbjct: 338 DVDILCQAMGVPIPSLVWYKDSIPLSKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASN 397
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ L V + + Q P T+ L C +++ + +
Sbjct: 398 KAGEIQTYTYLDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILAS 457
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ + I ++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 458 GSVQIPRF----ILLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTV 505
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 8 VTIFCNPEAAPKPKF--VWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCT 61
VT+ C A P + +WK++G I SG GRR L I+ + D G+Y C
Sbjct: 246 VTLECVASARPVERLSIMWKRNGIKITSGISSFGRR-------LTITNPTSADVGMYFCE 298
Query: 62 ATNVHGMDESKGR---LIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIW 117
A + E R I L P Y+ P + +A +++ + C A + + +W
Sbjct: 299 A-KLRDSTEEPARAKAFISLMEPPYFTVEPESVILAEVEKDVDILCQAMGVPIPSL--VW 355
Query: 118 THNGVRIGNMDLNELETP--NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + L++L+ P + + GGL I DAG ++C + G+I T T
Sbjct: 356 YKDSI-----PLSKLQNPRYKVLLSGGL-RIHALRPQDAGIFQCFASNKAGEIQTYT 406
>gi|224613278|gb|ACN60218.1| Neural cell adhesion molecule L1-like protein precursor [Salmo
salar]
Length = 658
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 214/467 (45%), Gaps = 33/467 (7%)
Query: 75 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNEL 132
L+ + P+ Q P + + QL C A + D +W + + I LN
Sbjct: 14 LLDVKDPTKIFQAPEDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDMEIA---LNHT 70
Query: 133 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH 192
E ++ G+L+I N S D G Y+CV ++ V + + +IV P P + + E
Sbjct: 71 ENSGYFLEDGILQIVNVSHRDQGMYKCVARTPVDQDTASALLIVLDVPDAPENLVLSEHK 130
Query: 193 KTSATIQWTDGATNGRPITHYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
S ++W G + T + I + W +N E+ R G +++
Sbjct: 131 GRSVKLKWIPGDDHNSSTTDFIIEYEESQWEPGNWN--------ELQRVPGNHGSAVLK- 181
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L Y F+V N +G G PS P+ +Y TP P + P I G ++ I+WEPL
Sbjct: 182 LYGHVDYRFRVSGVNAVGRGSPSEPTERYKTPPAAPDKNPENIKIEGHLAHEMDINWEPL 241
Query: 312 PREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN 370
+ N P + YK+ +++++ + ++ +K + V V P+ + YEV++QA N
Sbjct: 242 SPIEHNGPGLEYKVSYKRQDVEEDWHEHVVKRHSFV---VKGTPT---FVPYEVRIQARN 295
Query: 371 DVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRI 430
G GPE +V+T +S ED P AP V N++ + V+W + ++ + G L G+RI
Sbjct: 296 YQGWGPEPKVMTGYSGEDFPSAAPDDVEVEVMNNSLVKVSWTRVH--KDKLHGHLGGYRI 353
Query: 431 KYWKEDNPEETAVYYLSRTT------RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+W+ + ++ + ++ T RN A++ GL P ++Y + VM +N G GP S
Sbjct: 354 NWWRLRSLLDSKKTHGNKHTLTFPGDRNHAMVPGLTPFSEYSLIVMTFNGRGNGPGSHAV 413
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+T P++ P + + TV +TW P + GY++
Sbjct: 414 NFKTPEGVPEENP-VFRVTDVQKHTVALTW--APPLVANGVVTGYRL 457
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGF 402
GN G AV+++ + + +Y +V +N VG G SE + + P P+ + G
Sbjct: 173 GNHGSAVLKL---YGHVDYRFRVSGVNAVGRGSPSEPTERYKTPPAAPDKNPENIKIEGH 229
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ +++ W P+ I N G + +++ Y ++D E+ ++ R+ ++ G
Sbjct: 230 LAHEMDINWEPLSPIEHN--GPGLEYKVSYKRQDVEED---WHEHVVKRHSFVVKGTPTF 284
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y V++ A N G GPE + + P P V ++ +N + V V+W V
Sbjct: 285 VPYEVRIQARNYQGWGPEPKVMTGYSGEDFPSAAPDDVEVEVMNNSLVKVSWTRVHKDKL 344
Query: 523 EEPIIGYKVRVWE----VDQDMSRAND-TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+ GY++ W +D + N T+ G+ A + L+P Y + V+ F+
Sbjct: 345 HGHLGGYRINWWRLRSLLDSKKTHGNKHTLTFPGDRNHAMVPGLTPFSEYSLIVMTFNGR 404
Query: 578 GDGRMSSPAITFQMGE 593
G+G S A+ F+ E
Sbjct: 405 GNGP-GSHAVNFKTPE 419
>gi|47220665|emb|CAG06587.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2095
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 148/609 (24%), Positives = 257/609 (42%), Gaps = 53/609 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G ++ + C AP+P W+K ++ SG R + E+G+LLISP D+G Y+
Sbjct: 255 DGMSIILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHISDAGTYT 314
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N G+DE+ L+V + P ++ + C + + V +IW
Sbjct: 315 CMASNSRGIDEAAADLVVW-ARTRITTPPQDQSVIKGTKAFMTCGVTHDPSVTVKHIWEK 373
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I N P + D G L I+ D G Y C V S G S + V
Sbjct: 374 EGTAI-----NVQAIPRMRTDPDGTLHISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVSC 428
Query: 179 P------------PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
P P P V + K + + W P+ Y + N N+ W
Sbjct: 429 PVPPYPRRQLPHPPENPTAV-LSTSEKRAINLAWAKPFDGNSPLIRYILEVSEN-NAPWA 486
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+ + + E ++ N L+P +Y+F++ A N++G G+ S + + + P +
Sbjct: 487 ILLASIEPEST-------EVTV-NGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEP 538
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGN 345
P P + G + I W+P P QN Y + +R ++Q LK +
Sbjct: 539 PSAPPQNVIASGRTNQSIMIQWQPPPESHQNGILRGYVVRYRLTGLPVDYQ---LKNISS 595
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + + +T YE++V A N G G S VT ++ + +P +AP V + NST
Sbjct: 596 PDVTNLLLEDLIIWTNYEIEVAAFNGAGLGAFSHKVTEWTLQGVPTIAPGNVQAEAVNST 655
Query: 406 AINVTW---NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGL 459
I TW NP + I G G+++ W+ ++ + + + + + + GL
Sbjct: 656 TIRFTWTAPNP-----QFINGINQGYKLLTWEPRKDKDVTMVIVRPNFQDSVHVGYVTGL 710
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+ T+YY V+ + G+GP S RT+ P + I T++ V+W P
Sbjct: 711 KKFTEYYTSVLCFTTPGDGPRSPPRAARTHEDTPGA-VGHLSFTEILDTSLKVSWS--EP 767
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
S + + GY++ E ++ +R + V TL+ + L+ Y + V ++ G
Sbjct: 768 SEKNGVLTGYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAGMTSKGQ 825
Query: 580 GRMSSPAIT 588
G +SS I+
Sbjct: 826 GLLSSSTIS 834
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 147/604 (24%), Positives = 241/604 (39%), Gaps = 61/604 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P+P VW KD I R ++ G+L ++ + DD+G++ C A NV
Sbjct: 166 VDIPCQARGTPQPDIVWYKDALPIDPVKMLRYRVLVGGSLQVNGLLPDDTGMFQCFARNV 225
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V P T+ ++ L C T A W G R+
Sbjct: 226 AGEVQTNTYLAVTSIAPNITAGPSDSTVIDGMSIILHC--ETSGAPRPAITW-QKGERV- 281
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
+ ++ P ++ G L I+ + +DAG Y C+ ++ G ++V +
Sbjct: 282 -LASGSVQLPRFTLLESGSLLISPSHISDAGTYTCMASNSRGIDEAAADLVVWARTRITT 340
Query: 185 GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRK 244
Q V K + T G T+ +T I W + + + R
Sbjct: 341 PPQDQSVIKGTKAFM-TCGVTHDPSVTVKHI---------WEKEGTAINVQAIPRMRTDP 390
Query: 245 EASIENVLVPWS----TYEFKV--IAGNE-----LGYGEPSSPSPQYNTPADKPYQAPSR 293
+ ++ ++ WS TY +V + GN+ L P P P+ P P + P+
Sbjct: 391 DGTL-HISQTWSGDIGTYTCRVTSVGGNDSRSAHLRVSCPVPPYPRRQLP--HPPENPTA 447
Query: 294 IGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKND------TEFQSETLKEYGNV 346
+ K ++++W +P N+P I Y + + N + E+ + N
Sbjct: 448 VLSTSEKRA-INLAWAKPF---DGNSPLIRYILEVSENNAPWAILLASIEPESTEVTVN- 502
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
G+ R Y+ ++ A+NDVG G S E + E+ P PQ V + G +
Sbjct: 503 GLIPAR--------SYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQ 554
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I + W P +N G L G+ ++Y P + + +S L+ L T Y
Sbjct: 555 SIMIQWQPPPESHQN--GILRGYVVRYRLTGLPVDYQLKNISSPDVTNLLLEDLIIWTNY 612
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V A+N AG G S + E T + P P V + +N TT+ TW +P F
Sbjct: 613 EIEVAAFNGAGLGAFSHKVTEWTLQGVPTIAPGNVQAEAVNSTTIRFTWTAPNPQFINGI 672
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR----YHMRVLAFSNGGDGR 581
GYK+ WE +D + P N D+ V G + Y+ VL F+ GDG
Sbjct: 673 NQGYKLLTWEPRKDKDVTMVIVRP--NFQDSVHVGYVTGLKKFTEYYTSVLCFTTPGDGP 730
Query: 582 MSSP 585
S P
Sbjct: 731 RSPP 734
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 182/455 (40%), Gaps = 76/455 (16%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR----TNWNSTWFNVSEHVIG 234
PP P V EV + W G+ P+ +Y + R +NW+ +VS
Sbjct: 1281 PPSRPV-VPQKEVQARQVLLSWEPGSDGLSPVRYYTVQLRELPESNWSVHSASVSHEATS 1339
Query: 235 KEVDRYTGRKEA---------------SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
V R +E+ + + L P+++Y+F+V A N++G E S+ S
Sbjct: 1340 YIVSRLLLTQESRWRLGPSAGVPHPPSASSDRLKPFTSYQFRVKATNDIGDSEYSAESEA 1399
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
T D P + P+ + + I W+P EK N + ++I +R E +
Sbjct: 1400 ITTLQDAPDEVPAILSVTPHTTTSVLICWKPPSEEKINGILLGFRIRYR-----ELLYDR 1454
Query: 340 LKEYGNVGIAVVRIPSEFY-----------------------YTEYEVKVQAINDVGPGP 376
L+ Y I+ + ++ + YE+++ N VG GP
Sbjct: 1455 LRGYSAHAISSISAWADLSAPYSIRNLTDSSLIQYELDKLSKHKRYEIRMSVYNAVGEGP 1514
Query: 377 ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED 436
S +F E +P PQ V + +T ++VTW+P + +N G + G+++ +W+
Sbjct: 1515 SSPPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPVDAQN--GDIQGYKVYFWEFQ 1572
Query: 437 NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496
ET + L T Y + V +N AG+GP S R AP K
Sbjct: 1573 RKNETERLRTLFMPEGGVKLKNLTGYTTYMISVAPFNAAGDGPRSRR-----QEGAPSKQ 1627
Query: 497 ------PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
PS +H + T+V+V+W P+F I GY++ V+E D+ P
Sbjct: 1628 VCTDGVPSFIHFSELTTTSVNVSWG--EPAFPNGIIEGYRL-VYEPCAPADECPDSPSPP 1684
Query: 550 -VGNTLDAD----------IVDLSPGKRYHMRVLA 573
V T+ D + DL+ G Y+ R+ A
Sbjct: 1685 GVSKTVTVDMKGSGPLWLKLRDLADGVTYNFRIRA 1719
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 205/503 (40%), Gaps = 86/503 (17%)
Query: 135 PNINID---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQ 187
PN+ ++ GL +T + AG ++ G+ ++ I G PP LPG +
Sbjct: 796 PNVTLEYRVTGLTALTTYTIEVAG------MTSKGQGLLSSSTISSGVPPELPGPPTNLA 849
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDR----- 239
+ + S T+Q+ G I+ +++ A+ N W V H + E +
Sbjct: 850 ISNIGPRSVTLQFKPGYDGKTSISRWQVEAQVGVVGENEDWVMV--HQVSNEPEARSLEV 907
Query: 240 --------YTGRKEASIEN-------VLVPWST-----YEFKVIAGNELGYGEPSSPSPQ 279
Y ++ ++ V+ P T + F++ N +G PS PS +
Sbjct: 908 PGLNPYTAYRSQRPVQLDQNPFGFAYVIAPVVTTMPRPFRFRMHQVNIVGSSPPSQPSRK 967
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN--APNIYYKIFWRK-------- 329
T P AP+ + L + W PLP + N A + Y++ + +
Sbjct: 968 IQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYNGNAEQVGYRVQYSRAGAPSRPL 1027
Query: 330 ------KNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383
+ + EF E L+E+ EYEV+VQA+N +G GP S+ V
Sbjct: 1028 IHIITDRQEREFTIEDLEEW----------------MEYEVRVQALNGIGAGPWSQPVRG 1071
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
+ E +P P V + S++I V W +E+ + G ++G+++ Y ++D+
Sbjct: 1072 RTRESVPSCGPTNVSAFATTSSSILVRW--LEVPDPDRNGLILGYKVVYKEKDSDSAVHF 1129
Query: 444 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHI 502
+ + + + GL Y ++V+A+ G+G P + LERT P PP +
Sbjct: 1130 WTVDGNATHSVQLTGLGKYVLYEIQVLAFTRMGDGRPSAPPILERTLDDVP-GPPVGILF 1188
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN--TLDADIVD 560
+ T+V + W+ SPS I+ Y++ + + +N + V N + +
Sbjct: 1189 PEVRTTSVRLIWQ--SPSEPNGIILAYQI---TYHHNSTNSNTATVDVLNPSARQYTVTN 1243
Query: 561 LSPGKRYHMRVLAFSNGGDGRMS 583
L P Y R+ A + G G +
Sbjct: 1244 LKPESVYVFRITAQTRKGWGEAA 1266
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 2/227 (0%)
Query: 362 YEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+ ++ +N VG P S+ I + P +AP V R + T++ + W P+ N
Sbjct: 946 FRFRMHQVNIVGSSPPSQPSRKIQTLPAPPDMAPANVTLRTASETSLWLRWMPLPEWEYN 1005
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+G+R++Y + P ++ ++ I L+ +Y V+V A N G GP
Sbjct: 1006 GNAEQVGYRVQYSRAGAPSRPLIHIITDRQEREFTIEDLEEWMEYEVRVQALNGIGAGPW 1065
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S+ RT P P+ V +++ V W V I+GYKV E D D
Sbjct: 1066 SQPVRGRTRESVPSCGPTNVSAFATTSSSILVRWLEVPDPDRNGLILGYKVVYKEKDSD- 1124
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
S + + T + L Y ++VLAF+ GDGR S+P I
Sbjct: 1125 SAVHFWTVDGNATHSVQLTGLGKYVLYEIQVLAFTRMGDGRPSAPPI 1171
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 139/314 (44%), Gaps = 25/314 (7%)
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
H+I +R E +IE+ L W YE +V A N +G G S P + T P
Sbjct: 1029 HIITDRQER-----EFTIED-LEEWMEYEVRVQALNGIGAGPWSQPV-RGRTRESVPSCG 1081
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K+ D+ T+ GN
Sbjct: 1082 PTNVSAFATTSSSILVRWLEVPDPDRNGLILGYKVVYKEKDSDSAVHFWTVD--GN-ATH 1138
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
V++ Y YE++V A +G G P + + + +D+P P G+ +T++
Sbjct: 1139 SVQLTGLGKYVLYEIQVLAFTRMGDGRPSAPPILERTLDDVPG-PPVGILFPEVRTTSVR 1197
Query: 409 VTW-NPIELIRENIRGRLIGHRIKYWKEDNPEETA-VYYLSRTTRNWALIVGLQPDTKYY 466
+ W +P E G ++ ++I Y TA V L+ + R + + L+P++ Y
Sbjct: 1198 LIWQSPSE-----PNGIILAYQITYHHNSTNSNTATVDVLNPSARQYT-VTNLKPESVYV 1251
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEE 524
++ A G G +E + T ++A +PPS V K + V ++W S
Sbjct: 1252 FRITAQTRKGWGEAAEALVVTTEKRARPQPPSRPVVPQKEVQARQVLLSWEPGSDGL--S 1309
Query: 525 PIIGYKVRVWEVDQ 538
P+ Y V++ E+ +
Sbjct: 1310 PVRYYTVQLRELPE 1323
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA--- 62
VT+ C A P K VW+K+G ++ SGG + L I + D+G Y C A
Sbjct: 73 VTMECVANARPLIKLSIVWRKNGVLV-SGGLSDF--SRRLTIFGPALSDAGYYECEAILR 129
Query: 63 -TNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
++V + S G + ++ P + + P K IT + + + C A D+ +W +
Sbjct: 130 SSSVPSV--SAGAYLHVYEPPQFIKEPEKHITAEMEKVVDIPCQARGTPQPDI--VWYKD 185
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ I + + + GG L++ D G ++C ++ G++ T T + V
Sbjct: 186 ALPIDPVKMLRYRV----LVGGSLQVNGLLPDDTGMFQCFARNVAGEVQTNTYLAV 237
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
+ T+ TI W+ G PIT Y I AR + W ++ I KEV +T + + V
Sbjct: 1752 YGTALTIHWSSGDPGRAPITRYVIEARPSDEGLW-DILIKDIPKEVTSHTFNLDILKQGV 1810
Query: 252 LVPWSTYEFKVIAGNELGYGEP 273
TY+F+VIA N+ GYG P
Sbjct: 1811 -----TYDFRVIAVNDYGYGSP 1827
>gi|344235989|gb|EGV92092.1| Neural cell adhesion molecule L1 [Cricetulus griseus]
Length = 1287
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 265/635 (41%), Gaps = 87/635 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 430 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 489
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V E I R + C A + L + W +
Sbjct: 490 QAANDQNNVTILANLQVKEATQITEGPRSAIEKKGAR-VTFTCQASFDPSLQASITWRGD 548
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 549 G-----RDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 603
Query: 180 PGLPGGVQVVE---VHKTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSE 230
PG +++ + + ++ + W+ + PI Y I +A W S
Sbjct: 604 PGPVSHLELSDRYLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWYS------- 656
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK---- 286
+GK + S L P+ Y F+V A N+ G GEPS S TP +
Sbjct: 657 --LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAELRTT 709
Query: 287 -----------------------------------PYQAPSRIGGGGGKIGDLSISWEPL 311
P + P + G G + ++ I+W+PL
Sbjct: 710 AAVLELLSYCFMGQSGPFVPCPCCSTDRLTHYFPAPEKNPVDVRGEGNETNNMVITWKPL 769
Query: 312 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371
NAP + Y++ WR + + ET KE V + + + + YE+KVQA+N+
Sbjct: 770 WWMDWNAPQVQYRVQWRPQG----KQETWKEQ-TVSDPFLVVSNTSTFVPYEIKVQAVNN 824
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
G GPE +V +S ED PQV+P+ FNS+ + V W P++L + ++G L G+ +
Sbjct: 825 QGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQ--VKGHLRGYNVT 882
Query: 432 YWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYL 485
+W + + + + ++ ++ A++ GL+P + Y+V+V A+N G GP SE +
Sbjct: 883 FWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHVEVGAFNGRGLGPASE-WT 941
Query: 486 ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545
T P P A+H++ + T++ + W+ P + GY + +D +
Sbjct: 942 FSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLTGYLLSYHPLDGESKEQLF 998
Query: 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ ++ +L+P +Y ++ A + G G
Sbjct: 999 LNLSDPELRTHNLTNLNPNLQYRFQLQATTQQGPG 1033
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 142/652 (21%), Positives = 234/652 (35%), Gaps = 121/652 (18%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W +G + + + + E G+L++S V D+ + C
Sbjct: 337 GPGETARLDCQVQGRPQPEVTWSINGMSMEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 396
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 397 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 443
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKIS---- 169
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 444 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCQAANDQNNVTILAN 503
Query: 170 ---TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
+ T I EGP + K A + +T A+ + A W
Sbjct: 504 LQVKEATQITEGPRS--------AIEKKGARVTFTCQASFDPSLQ-----ASITWRGDGR 550
Query: 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP-------SSPSPQ 279
++ E + D+Y + L + +A EL E SP P
Sbjct: 551 DLQER---GDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPV 607
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+ Y K + +SW P E N+P Y I + K + +
Sbjct: 608 SHLELSDRYLL---------KQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWYS 656
Query: 340 L-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-----------PESEVVTIFSAE 387
L K GN +++ Y Y +V AIN GPG PE+E+ T +
Sbjct: 657 LGKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAELRTTAAVL 713
Query: 388 DM-----------------------------PQVAPQGVFSRGFNSTAINVTWNPIELIR 418
++ P+ P V G + + +TW P+ +
Sbjct: 714 ELLSYCFMGQSGPFVPCPCCSTDRLTHYFPAPEKNPVDVRGEGNETNNMVITWKPLWWMD 773
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVMAYNNAGE 477
N + +R++ W+ +ET + +T + L+V Y +KV A NN G+
Sbjct: 774 WN--APQVQYRVQ-WRPQGKQET---WKEQTVSDPFLVVSNTSTFVPYEIKVQAVNNQGK 827
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW--- 534
GPE + + + PQ P I N +TV V WR V + + + GY V W
Sbjct: 828 GPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYNVTFWWKG 887
Query: 535 ---EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ + + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 888 SQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVEVGAFNGRGLGPAS 938
>gi|397498087|ref|XP_003819824.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Pan paniscus]
Length = 2159
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 252/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 439 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 498
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 499 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 557
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 558 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 613
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W PI +Y I+ + NS W V +G E+
Sbjct: 614 PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 671
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 672 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 724
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 725 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 781
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 782 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 840
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 841 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 899
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 900 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 954
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 955 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSSTIS 1008
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 151/609 (24%), Positives = 230/609 (37%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 349 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 408
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 409 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 468
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 469 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 519
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T+AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 520 TSIVHPPEDHVV-IKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 576
Query: 238 DRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQYNTPAD 285
+ WS Y ++++ GN+ P SP +P
Sbjct: 577 SLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNS 626
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY + + N S
Sbjct: 627 SHSHA-------------VVLSWVRPF---DGNSPILYYIVELSENN-----SPWKVHLS 665
Query: 345 NVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
NVG + V + Y+ +V A+N+VG G S E + E+ P P+ + + G
Sbjct: 666 NVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 725
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 726 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 783
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W F
Sbjct: 784 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQF 843
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P I +L Y VL F+ GDG
Sbjct: 844 INGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDG 903
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 904 PPSTPQLVW 912
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 41/366 (11%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1435 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR------ 1488
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + SS + T D P + P + +
Sbjct: 1489 ------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVL 1542
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 349
I W+P E N Y+I++R+ K+ ++E + + V +
Sbjct: 1543 IQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKTVNSS 1602
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ V ++
Sbjct: 1603 STSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTAS 1662
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ VTW+P +N G + G++I YW+ D+ ET + + L TKY
Sbjct: 1663 QLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTKY 1720
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1721 LVSISAFNAAGDGPRSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAAANGI 1777
Query: 526 IIGYKV 531
+ GY+V
Sbjct: 1778 LQGYRV 1783
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 915 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 970
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 971 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGAGLVTSSTISSGVPPDLP-GAPSNL 1022
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1023 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1082
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1083 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1142
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1143 LPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1202
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1203 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1262
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1263 RAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1315
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 189/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1001 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1056
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1057 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1109
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1110 RVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1165
Query: 335 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1166 LQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRES 1220
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1221 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVRG 1278
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1279 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRL 1337
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1338 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAP 1390
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1391 ESAYIFRLSAKTRQGWG 1407
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 192/487 (39%), Gaps = 49/487 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1296 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1355
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1356 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1407
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1408 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1466
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1467 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1524
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-------------- 436
P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1525 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKMLKS 1582
Query: 437 ----NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1583 PIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFV 1642
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
AP P V + + + + VTW P + I GYK+ WE D ++
Sbjct: 1643 GEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVL 1702
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS-- 606
+ + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1703 FLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPRSDP----QQGRTHQAAPGAPSFLAFS 1757
Query: 607 --ASTTL 611
STTL
Sbjct: 1758 EITSTTL 1764
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P V V +TS ++W D NG P + Y+I W S
Sbjct: 1108 SSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRS 1164
Query: 224 TWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++ + + V DR +E +IE + YE ++ A N +G G P S + T
Sbjct: 1165 ---DLQSSAVAQVVSDRL--EREFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1217
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1218 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR 1277
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1278 --GNHTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1334
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1335 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1388
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1389 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1448
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A +VD L P Y +R+ A ++ G
Sbjct: 1449 SDGASPIRYFTVQVRELPRGEWQTYSSSI--SHEATACVVDRLRPFTSYKLRLKATNDIG 1506
Query: 579 DGRMSS 584
D SS
Sbjct: 1507 DSDFSS 1512
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1846 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1899
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1900 IPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1950
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 20/346 (5%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1619 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1677
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 377
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1678 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1735
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437
S+ + + P AP + ST +NV+W E N G L G+R+ Y +
Sbjct: 1736 SDPQQGRTHQAAPG-APSFLAFSEITSTTLNVSWG--EPAAAN--GILQGYRVVY-EPLA 1789
Query: 438 PEETAVYYLSRTTR----NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493
P + ++ R W + L Y+ +V A GPE L+ P
Sbjct: 1790 PVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQA-RTITYGPE----LQANITAGP 1844
Query: 494 QK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN 552
+ P + + + +T ++ + P GY + D+ + IP
Sbjct: 1845 AEGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSA 1904
Query: 553 TLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
T +D L G Y RV+A + G G S+P+ E F
Sbjct: 1905 TSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 1950
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 165 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIY 224
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 225 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 282
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 283 -------TSGLHSFGRRLTISNPTSADTGPYVC 308
>gi|198435834|ref|XP_002122484.1| PREDICTED: similar to Contactin-2 precursor (Axonin-1) (Axonal
glycoprotein TAG-1) (Transient axonal glycoprotein 1)
(TAX-1) [Ciona intestinalis]
Length = 815
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 188/401 (46%), Gaps = 36/401 (8%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGN-IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
V I C+ EAAP VW KD + ++ + ++ L IS ++ D+G+Y+C A N
Sbjct: 425 VIITCDIEAAPAAVIVWTKDTDQVLVIDNNKYTLQSDGLKISNLANGDAGVYNCYAENDM 484
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G +S+G L + + P+ P + +Q+ C A + L++ + WT NG I
Sbjct: 485 GNVQSEGTLQI-YLPTVITTGPQGNEVIVGDLVQMGCQATHDNQLELTWSWTQNGEAISV 543
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
D + I G + I + S AG Y+C + VG TV+V PP P V
Sbjct: 544 FD------KHYTISGDSILIKDVSSEQAGIYQCCANTDVGTDCASATVVVMAPPEPPTNV 597
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDRYTGRKE 245
V ++ + T+QW G NG + Y + A+ ++ +W F V+ + V+ T + +
Sbjct: 598 MVTNSYENTVTLQWQAGNDNGAAVDLYLVEAKCGFDCSWRFIVTSPIF---VNTTTCQVK 654
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L+P + Y F+V A N+ G G PS PS Y++P P + P +I G ++G+L
Sbjct: 655 K-----LLPNNDYMFRVTAMNKYGTGAPSEPSAVYSSPPGAPIRHPIKIKGASKELGELV 709
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKK------------NDTEFQS-------ETLKEYGNV 346
+ W+P+ + +I YK+ RK+ NDT E + G
Sbjct: 710 VQWQPMQPKYFGDNDISYKVVIRKQVRGDPVVLPVNLNDTNVPPVDNRPWIEQVAIGGTK 769
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
++ + + YEVKVQA+N+ GPGP S + + +AE
Sbjct: 770 NQTTFKVNASEIFVPYEVKVQAVNNYGPGPFSLMRVLHTAE 810
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 9 TIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FENGNLL-ISPVSRDDSGIYSCTATNV 65
+I C A P P F W K+G ++G G I F+ G+ L I VS D G+Y C +N
Sbjct: 331 SIQCGAIAVPTPSFTWLKNGVVLGDSGNINIGNFDGGSQLDIYDVSEADQGMYQCVVSNS 390
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
HG S ++ V+ P + P IT AA N ++ + E +WT + ++
Sbjct: 391 HGSIFSSAKMAVVSIPPTIIEPVPDITRAALDN-EVIITCDIEAAPAAVIVWTKDTDQVL 449
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK-------TTVIVEG 178
+D N+ + DG L+I+N + DAG Y C ++ +G + ++ TVI G
Sbjct: 450 VIDNNKY---TLQSDG--LKISNLANGDAGVYNCYAENDMGNVQSEGTLQIYLPTVITTG 504
Query: 179 PPG--------LPGGVQVVEVHKTSATIQWTDGATNGRPIT----HYKI 215
P G + G Q ++ T WT NG I+ HY I
Sbjct: 505 PQGNEVIVGDLVQMGCQATHDNQLELTWSWTQ---NGEAISVFDKHYTI 550
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A GG I C P P+ W K DG + I E G L++ V+ D +G Y C
Sbjct: 236 AKRGGYAIIECFASGRPTPQLSWTKLDGPM---PVNHTISEAGQLILKAVTEDMAGTYRC 292
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
TA N G + G L + + P + P + + R + ++ W N
Sbjct: 293 TAVNSKGSTHADGELRLEYAPQWTS---PISSFSVDRTTSASIQCGAIAVPTPSFTWLKN 349
Query: 121 GVRIGNMDLNELETPNINI---DGG-LLEITNASFADAGEYECVVKSTVGKI-STKTTVI 175
GV +G ++ NINI DGG L+I + S AD G Y+CVV ++ G I S+ +
Sbjct: 350 GVVLG-------DSGNINIGNFDGGSQLDIYDVSEADQGMYQCVVSNSHGSIFSSAKMAV 402
Query: 176 VEGPPGL 182
V PP +
Sbjct: 403 VSIPPTI 409
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 99 LQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 158
+ C A+ ++D Y W +G + D + + + GG LEI+N +DAG+Y+
Sbjct: 39 ISFTCKAN---VVDPVYTWRKDGSPVDTADGSRFQ-----VHGGTLEISNPQDSDAGDYQ 90
Query: 159 CVVKSTVGKISTKTTVIVEG 178
CV+ S G + + +V G
Sbjct: 91 CVLSSVDGTVVSNYGKLVFG 110
>gi|432097796|gb|ELK27832.1| Neural cell adhesion molecule L1 [Myotis davidii]
Length = 1206
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/616 (24%), Positives = 260/616 (42%), Gaps = 68/616 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W K+G + R + NG L I + +D+G Y C
Sbjct: 438 AVEGSTAYLLCKVFGAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFC 497
Query: 61 TATNVHGMDESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N D++ ++ + + Q P + C A + L + W
Sbjct: 498 QAAN----DQNNVTIVANLQVKDATRITQGPQSTIKKKGSRVTFTCQATFDPSLQQSITW 553
Query: 118 THNGVRI---GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
+G + G+ D I+ G L I + ++D G Y CV + + + ++ +
Sbjct: 554 RRDGRSLQEPGDSD-------KYFIEDGHLVIHSLDYSDQGNYSCVASTKLDVVESRAEL 606
Query: 175 IVEGPPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTW 225
V G PG +++ + H ++ + W+ + PI Y I +A W S
Sbjct: 607 QVVGSPGPVPQLELSDRHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYS-- 664
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
+GK + S L P+ Y F+V A N+ G GEPS S TP
Sbjct: 665 -------LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPASETVVTPEA 712
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
P + P + G G + ++ I+W+PL NAP + Y++ WR + E +
Sbjct: 713 APEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGAWQEQI----- 767
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
V + + + + YE+KVQ IN G GPE +V +S ED PQ P+ + N++
Sbjct: 768 VSDPFLVVSNTSTFVPYEIKVQTINSQGKGPEPQVTVGYSGEDYPQAKPKLEDIKILNAS 827
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYW--------KEDNPEETAVYYLSRTTRNWALIV 457
+ V W P++ + ++G L G+ + YW + + ET V + TT ++
Sbjct: 828 TVLVKWWPVDPAQ--VKGHLRGYNLTYWWMGSQRRHSKRHIHETHVVVPANTTS--TVLD 883
Query: 458 GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
L+P + Y +++ A+N+ G GP SE T P PP A+H++ + T++ + W+
Sbjct: 884 RLRPYSSYRLELRAFNSRGLGPPSETTFS-TPEGVP-GPPEALHLECQSDTSLLLHWQ-- 939
Query: 518 SPSFEEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576
P F ++ GY + + + ++ +LSP +Y ++ A +
Sbjct: 940 -PPFSHNGVLTGYVLSCLPLGDGGEEQLSFNLSDPELRAYNLTNLSPHLQYRFQLQATTK 998
Query: 577 GGDGRMSSPAITFQMG 592
G G AIT + G
Sbjct: 999 QGPGE----AITREGG 1010
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 136/608 (22%), Positives = 233/608 (38%), Gaps = 77/608 (12%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG----NIIGSGGRRKIFENGNLLISPVSRDDSGIY 58
G G + C + P+P+ W+ +G ++ + +I ++G L++S V D+ +
Sbjct: 344 GPGETARLDCQVQGRPEPEVTWRINGIPVEELLAKDQKYRI-QHGALILSNVQPSDTMVT 402
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A N HG L++ + Y QLP KI + L T LL +
Sbjct: 403 QCEARNRHG-------LLLANAYIYVVQLPAKI-LTPDNETYLAVEGSTAYLLCKVF--- 451
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFA-------DAGEYECVVKSTVGKISTK 171
G + ++ + E + D TN + D G Y C + ++
Sbjct: 452 --GAPVPSVQWLDKEGKTVLQDERFFPYTNGTLGIRDLQANDTGHYFCQAANDQNNVTIV 509
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-------- 223
+ V+ + G Q + K + + +T AT P I R + S
Sbjct: 510 ANLQVKDATRITQGPQST-IKKKGSRVTFTCQATFD-PSLQQSITWRRDGRSLQEPGDSD 567
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASI---ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 280
+F H++ +D Y+ + S + V S E +V+ G P P PQ
Sbjct: 568 KYFIEDGHLVIHSLD-YSDQGNYSCVASTKLDVVESRAELQVV-------GSP-GPVPQL 618
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL 340
+D+ S++ +SW P + NAP Y I + K + +L
Sbjct: 619 EL-SDRHLLKQSQV----------RLSWSPA--DDHNAPIEKYDIEFEDKEMAPEKWYSL 665
Query: 341 -KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVF 398
K GN +++ Y Y +V AIN GPG P T+ + E P+ P V
Sbjct: 666 GKVPGNQTSTTLKLSP---YVHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPVDVK 722
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
G + + +TW P+ + N +++Y + P+ T + + + L+V
Sbjct: 723 GEGNETNNMVITWKPLRWMDWN------APQVQYRVQWRPQGTRGAWQEQIVSDPFLVVS 776
Query: 459 -LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
Y +KV N+ G+GPE + + + PQ P IK +N +TV V W V
Sbjct: 777 NTSTFVPYEIKVQTINSQGKGPEPQVTVGYSGEDYPQAKPKLEDIKILNASTVLVKWWPV 836
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTI-----IPVGNTLDADIVDLSPGKRYHMRVL 572
P+ + + GY + W + + I + NT + L P Y + +
Sbjct: 837 DPAQVKGHLRGYNLTYWWMGSQRRHSKRHIHETHVVVPANTTSTVLDRLRPYSSYRLELR 896
Query: 573 AFSNGGDG 580
AF++ G G
Sbjct: 897 AFNSRGLG 904
>gi|334333316|ref|XP_001367462.2| PREDICTED: protein sidekick-1 [Monodelphis domestica]
Length = 2134
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 157/598 (26%), Positives = 254/598 (42%), Gaps = 41/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G + C APKP W++ I+ SG R + E+G L I+PV D+G Y+
Sbjct: 410 DGMTAMLTCEVSGAPKPAITWRRGKQILASGSVQIPRFILLESGGLQITPVFLQDAGNYT 469
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C A N G + L V + + PP+ T+ L C A + + + Y+W
Sbjct: 470 CYAVNSEGSLNAFAMLTVWN--RTFIVFPPEDRTVIKGTTATLHCGAIHDPRIPIRYVWK 527
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ + I + + + DG LL I+ D G+Y C V S G S + V
Sbjct: 528 KDNIVINPATSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEVISEGGNDSRMARLEVIE 583
Query: 179 PPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + H + + W P+ +Y I+ + NS W V + E
Sbjct: 584 LPHSPQNLLASLNSSHSRTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVDPE 641
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ T L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 642 MTSVTVSG-------LTPARTYQFRVCAVNQVGKGQHSAETSRLMLPEEPPSAPPKNIVA 694
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + + W+P P + N Y + +R E+Q + + I +
Sbjct: 695 SGRTNQSIMVQWQPPPETEHNGVLHGYILRYRLAGLPGEYQHRNIT---SPEINYCLVKD 751
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 752 LIIWTQYEIQVAAYNGAGLGTFSRAVTEYTLQGVPTAPPQNVQTEALNSTTIQFLWNPPP 811
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYN 473
++ I G G+++ W D PE ++ + I L+ T YY V+ +
Sbjct: 812 --QQFINGINQGYKLLAWPVDVPEALITVTIAPDFHGIHHGFITNLKKFTAYYTSVLCFT 869
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKV 531
G+GP S +L T+ KP + H+ I T++ V+W+ P + IIGY++
Sbjct: 870 TPGDGPRSPPHLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIIIGYQI 924
Query: 532 RVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 925 S-WEVYSRNDSRLTLTL--NNTTHEYKIKGLSSLTTYTIEVAAVTATGIGLVTSSTIS 979
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 39/349 (11%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S ++R
Sbjct: 1406 EVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSSISHEATAHVIER------ 1459
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + S+ + T D P + P+ + +
Sbjct: 1460 ------LNPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPNCVSVTPHTTSSVL 1513
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------N 345
+ W+P E N + Y+I++R+ KN + ++E + +
Sbjct: 1514 VQWQPPRDESLNGLLVGYRIYYRELEYETGPGTESKTVKNPSALRAELTPQSSFKTVNSS 1573
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + Y YEV + A N +G P S V +F E P +APQ + ++
Sbjct: 1574 SALTTYELTHLKKYKRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVNPLTAS 1633
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+ V W+P + +N G + G++I YW+ D+ +T + + L TKY
Sbjct: 1634 QLEVIWDPPPVESQN--GIIQGYKIYYWEADSQNDTENMKVLFLPETMVRLKNLTSHTKY 1691
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
V + A+N AG+GP+SE RT + AP PS + I TT++++W
Sbjct: 1692 LVSISAFNAAGDGPKSEPRQGRTQQAAPGA-PSFLAFSEITSTTLNISW 1739
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + I Y+I +W S +
Sbjct: 886 EDKPGAVGHLSFTEILDTSLKVSWQEPVEKNGIIIGYQI--------SWEVYSRNDSRLT 937
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ E I+ L +TY +V A G G +S + P + P APS +
Sbjct: 938 LTLNNTTHEYKIKG-LSSLTTYTIEVAAVTATGIGLVTSSTISSGVPPELP-GAPSNLVI 995
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
++ + P K + + D E S +E ++ IP+
Sbjct: 996 SNISPRSATLQFRPGYDGKTSISRWIVEGQIGAIGDEEEWSCLYEEENEPDAQMLEIPNL 1055
Query: 357 FYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
YT Y +++ +N VGP P S V+ A P +AP V R + T++ + W P
Sbjct: 1056 TPYTHYRFRMRQVNIVGPSPFSPSSRVIQTLQAP--PDIAPASVTVRTASETSLWLRWVP 1113
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D V +S I L+ T+Y +++ A+N
Sbjct: 1114 LPDSQYNGNPESVGYRIKYWRTDLQSSVMVQVISDRLEREYTIEELEEWTEYELQMQAFN 1173
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V ++ ++ T + +TW V + I+GYK+
Sbjct: 1174 AIGAGPWSEMVRGRTRESVPSAAPENVSVEAVSSTQILITWASVPEQDQNGLILGYKILF 1233
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D S ++ +T + L Y ++VLAF+ G+G SSP I
Sbjct: 1234 KAKDLD-SEPKTHVVRGNHTQSVLLAGLRKYVLYELQVLAFTRIGNGVPSSPPI 1286
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 197/446 (44%), Gaps = 49/446 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITH 212
E V + +G + T +T+ PP LPG + + + SAT+Q+ G I+
Sbjct: 961 EVAAVTATGIGLV-TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISR 1019
Query: 213 YKI---IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269
+ + I W + E + + I N L P++ Y F++ N +G
Sbjct: 1020 WIVEGQIGAIGDEEEWSCLYEE------ENEPDAQMLEIPN-LTPYTHYRFRMRQVNIVG 1072
Query: 270 YGEPSSPSPQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 325
P SPS + T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1073 -PSPFSPSSRVIQTLQAPPDIAPASVTVRTASETSLWLRWVPLPDSQYNGNPESVGYRIK 1131
Query: 326 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 379
+WR T+ QS + V + R+ E+ +TEYE+++QA N +G GP SE
Sbjct: 1132 YWR----TDLQSSVM-----VQVISDRLEREYTIEELEEWTEYELQMQAFNAIGAGPWSE 1182
Query: 380 VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE 439
+V + E +P AP+ V +ST I +TW + +N G ++G++I + +D
Sbjct: 1183 MVRGRTRESVPSAAPENVSVEAVSSTQILITWASVPEQDQN--GLILGYKILFKAKDLDS 1240
Query: 440 ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPS 498
E + + L+ GL+ Y ++V+A+ G G P S LERT AP PP
Sbjct: 1241 EPKTHVVRGNHTQSVLLAGLRKYVLYELQVLAFTRIGNGVPSSPPILERTKDDAP-GPPV 1299
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL- 554
+ + T+V + W+ EEP I+GY++ + V S T + VG+T+
Sbjct: 1300 RLVFPEVRLTSVRIVWQP-----PEEPNGIILGYQI-AYRVATS-SPNKFTTVEVGSTVR 1352
Query: 555 DADIVDLSPGKRYHMRVLAFSNGGDG 580
DL+P Y R A + G G
Sbjct: 1353 QFTATDLTPESAYIFRASAKTRQGWG 1378
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 190/470 (40%), Gaps = 55/470 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1295 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRVATSSPNKFTTVE--VGSTVR 1352
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T L P S Y F+ A G+GEP + D+P P +
Sbjct: 1353 QFTATD-------LTPESAYIFRASAKTRQGWGEPLEATVITTEKRDRP-APPRHLLIPQ 1404
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
++ S+ + +P ++P Y+ + R+ E+Q+ + V+ + F
Sbjct: 1405 SEVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSSISHEATAHVIERLNPF- 1463
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++++A ND+G E+E VT +D+P P V ++++ V W P
Sbjct: 1464 -TSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPNCVSVTPHTTSSVLVQWQPPR 1520
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDT----------- 463
E++ G L+G+RI Y + + ET S+T +N AL L P +
Sbjct: 1521 --DESLNGLLVGYRIYYRELEY--ETGPGTESKTVKNPSALRAELTPQSSFKTVNSSSAL 1576
Query: 464 ------------KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+Y V + AYN GE P S AP P + + + + +
Sbjct: 1577 TTYELTHLKKYKRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVNPLTASQLE 1636
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
V W + I GYK+ WE D N ++ + T+ + +L+ +Y + +
Sbjct: 1637 VIWDPPPVESQNGIIQGYKIYYWEADSQNDTENMKVLFLPETM-VRLKNLTSHTKYLVSI 1695
Query: 572 LAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
AF+ GDG S P + G ++ G+P+ + S + S+TL I
Sbjct: 1696 SAFNAAGDGPKSEP----RQGRTQQAAPGAPSFLAFSE----ITSTTLNI 1737
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 196/458 (42%), Gaps = 33/458 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1046 DAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSPSSRVIQTLQAPPDIAPASVTVRTASET 1105
Query: 195 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y+I RT+ S+ V VI ++R E +IE
Sbjct: 1106 SLWLRWVPLPDSQYNGNPESVGYRIKYWRTDLQSS---VMVQVISDRLER-----EYTIE 1157
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + T P AP + + I+W
Sbjct: 1158 ELEEW-TEYELQMQAFNAIGAG-PWSEMVRGRTRESVPSAAPENVSVEAVSSTQILITWA 1215
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI ++ K+ D+E ++ ++ GN +V+ + Y YE++V A
Sbjct: 1216 SVPEQDQNGLILGYKILFKAKDLDSEPKTHVVR--GNHTQSVL-LAGLRKYVLYELQVLA 1272
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S + + +D P + VF T++ + W P E I G I
Sbjct: 1273 FTRIGNGVPSSPPILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQPPEEPNGIILGYQIA 1331
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
+R+ +P + + T R + L P++ Y + A G G E +
Sbjct: 1332 YRVA---TSSPNKFTTVEVGSTVRQFT-ATDLTPESAYIFRASAKTRQGWGEPLEATVIT 1387
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547
T ++ PP + I T+ + ++V S PI + V++ E+ + + +
Sbjct: 1388 TEKRDRPAPPRHLLIPQSEVTSRSLQLQWVPGSDGSSPIRYFTVQIRELPRGEWQTYSSS 1447
Query: 548 IPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
I + A +++ L+P Y +R+ A ++ GD S+
Sbjct: 1448 I--SHEATAHVIERLNPFTSYKLRLKATNDIGDSDFSA 1483
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QW +G RP T Y I AR + W + K+
Sbjct: 1817 EGSPGSPRDVLVTK-SASELTLQWMEGNPGDRPTTGYIIEARPSDEGLW-----DMFVKD 1870
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R ++ L TYEF+V+A N+ GYGEPSSPS + ++ P+
Sbjct: 1871 IPRSATSYTVGLDK-LRQGVTYEFRVVAVNDFGYGEPSSPSVAVSAQSETPF 1921
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 6/171 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD I R K+ +G L I + DDSGI+ C A N
Sbjct: 321 VDITCQAMGVPVPNLEWYKDSVPISKLRNSRYKVLVSGGLRIQKLHPDDSGIFQCFARNE 380
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G E+ L V + + P T+ L C + + + G
Sbjct: 381 GGEIETHTYLDVTNIAPTFTLRPVDTTVTDGMTAMLTCEVSGAPKPAITWRRGKQILASG 440
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ + I ++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 441 SVQIPRF----ILLESGGLQITPVFLQDAGNYTCYAVNSEGSLNAFAMLTV 487
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG+ I R I L+I + D+G Y A N +
Sbjct: 136 PRPQVTWFRDGHKIIPSSRIAITLENQLVILATTAGDTGGYYVQAVNEKNGENKTSPFTY 195
Query: 78 LHGPSYYEQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L S + +PP T +A + L C A+ + +++ W NGV+I N
Sbjct: 196 LSIESESDTPDIMAPVIVIPPGNTSVVAGTSEVTLECIANARPIEELSMTWKRNGVKITN 255
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
L+ L G L ITN + +D G Y C
Sbjct: 256 -GLHNL--------GRRLTITNPTSSDIGMYIC 279
>gi|328789768|ref|XP_392207.4| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Apis mellifera]
Length = 2163
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 166/617 (26%), Positives = 255/617 (41%), Gaps = 55/617 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK----------IFENGNLLISPVSRDD 54
G V+I C E P P WK+ + G R+ + NG+L+IS VSRD
Sbjct: 894 GHGVSIACQAEGFPIPTVTWKQSIGMDTPGDYRELGFSGTEGAGVAGNGSLVISRVSRDH 953
Query: 55 SGIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
+G Y C A+N G SK RL V GP + + ++ ++ LRC A + LD+
Sbjct: 954 AGFYLCQASNGIGPGLSKLIRLTVHAGPQVSVKTQQE-SVRRGESVTLRCEAEGDAPLDL 1012
Query: 114 AYIWTHNGVRIG-NMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKIS 169
+ W R+ N D+ N + G + L IT A+ D G+Y CV + G
Sbjct: 1013 S--WRARDSRVDPNYDV-RYTIDNQKVSGRVISELRITQANHIDRGDYTCVATNAYGHAR 1069
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKIIARTNWNS 223
++V+ PP P + V E S + W+ D A PIT Y I+
Sbjct: 1070 AGIKLLVQEPPNFPRNLHVAEQGSRSLLLAWSSPSSEQDPAHASSPITKY-IVQYKEAQD 1128
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
W EH K V G ++ + L P ++Y F+V+A N LG PS T
Sbjct: 1129 VWH---EHNTQKMV---AGDNTVALVSPLKPATSYHFRVLAENHLGTSAPSDIL-HAQTD 1181
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
+ P +P + + ++W+P R N + Y I + + QS +
Sbjct: 1182 GEIPGGSPRHVIAEPLGPQQVKVTWQPPDRSLWNGELLGYTISYANLGGND-QSVNITRV 1240
Query: 344 GNV--GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
G G R+ YT+Y + V+A N+ G GP S+ VT+ + ED+P +PQ V
Sbjct: 1241 GITENGDGSYRLTGLRKYTQYSIVVKAFNNKGDGPGSDPVTVQTLEDVPSASPQNVACAA 1300
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKY------WKEDNPEETAVYYLSRTTRNWAL 455
I VTW P + + G + G+++ Y ++ ET + + T +
Sbjct: 1301 LTGQNIQVTWKPPP--SDKVHGVVQGYKLLYEAGSAVLEQQAGRETKISHALST-----V 1353
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ GL P T Y V+V+AY AGEG S T P P +K + V
Sbjct: 1354 LHGLSPYTNYTVQVLAYTRAGEGVTSSPVSCTTEETVPDAPE---RVKAVTSNEDAVVIS 1410
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
++ P + Y V + +DQ + + +P N L + L + Y V A
Sbjct: 1411 WLPPRRPNGILTKYTVHIRVLDQGQEVKTIKSSLPAQN-LHHEATGLKQRESYEAWVTAS 1469
Query: 575 SNGGDGRMSSPAITFQM 591
+ G G +P I Q+
Sbjct: 1470 TKIGQG-PRTPVIKLQL 1485
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + C+ P+ W KDG + +G R + + + V+R+D G+Y C N
Sbjct: 363 GKAAHLTCSASGFPQAALYWLKDGQPLRTGARIRAVSRERISVMSVAREDRGMYQCFVRN 422
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ M + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 423 EYEMAQGIAELRL-------GEIAPQLVYRFIEQTMQTGPSVSLKCSAAGNPTPQIS--W 473
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFA---DAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ N S D GEYEC+ S G+ S +
Sbjct: 474 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNISSVKSEDGGEYECIASSRAGEASHSARL 532
Query: 175 IVEGPP 180
+ G P
Sbjct: 533 NIYGLP 538
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTAT 63
G I C P VW+KDG + + R+++ NG+L I V R D G Y+CTA
Sbjct: 551 GKQFHIKCPVAGYPIESIVWEKDGVRLPTNMRQRV-ANGSLFIDTVQRAADQGTYTCTAR 609
Query: 64 NVHGMDESKG---RLIVLHGPSYYEQLPPKIT-IAAHRNL------QLRCSAHTEELLDV 113
N H + R++V PPKIT + R+L ++C T + L +
Sbjct: 610 NKHNFTSQRSVEVRVLV----------PPKITPFSFARDLNVGDRTSVQCVVVTGD-LPL 658
Query: 114 AYIWTHNGVRI 124
+ W + V I
Sbjct: 659 TFTWLKDNVPI 669
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 27/256 (10%)
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
+ WR+ D + Q ++ + G +R + Y V+ N +G E+V
Sbjct: 1522 VEWRR-GDVKLQQKS--DIGADNALTLRNVQRTHEGNYSCHVK--NSLG---SDEIVYTL 1573
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPEETA 442
+ P P + + G + A+ + W + I+G L+ +R ++ W+E + A
Sbjct: 1574 QVQVPP--TPPTLLATGTTTDAVQLQWKQGDNGGAPIKGFLLAYRREFSEWEEVMIDRKA 1631
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
N L+ GLQ T+Y + A+N G G S+ +T P P +
Sbjct: 1632 ---------NTHLLEGLQCGTRYQFTLAAFNRIGSGSASKIETAKTNGTKPIPP---IKH 1679
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562
+ I VT S P++ + V + D ++ + P IV+L
Sbjct: 1680 QLIKANQTFVTLELNSWQDGGCPLLYFVVEYRRLPGDWLLFSNNVQPQSR---FSIVNLD 1736
Query: 563 PGKRYHMRVLAFSNGG 578
G +Y +RV A++N G
Sbjct: 1737 SGTKYELRVTAYNNAG 1752
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Query: 8 VTIFCNPEAAPKPKFVW-----KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
V I C P P W +++ + S G + +G+L+I V D G Y CTA
Sbjct: 272 VVIPCVAYGNPTPTNRWYYNRNQREEPVEDSSGH-YVVRDGSLIIQGVQESDGGSYMCTA 330
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG- 121
+N G + + RL V P P T+ + L CSA A W +G
Sbjct: 331 SNSEGSESMEVRLTV-SAPLNVHVQPSIQTVDLGKAAHLTCSA--SGFPQAALYWLKDGQ 387
Query: 122 -VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+R G + + I+ + + + D G Y+C V++
Sbjct: 388 PLRTG-ARIRAVSRERIS-------VMSVAREDRGMYQCFVRN 422
>gi|354478083|ref|XP_003501245.1| PREDICTED: neurofascin isoform 3 [Cricetulus griseus]
Length = 1240
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 202/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y I + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVI----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 844 EWD----HPEHPNGILIGYTLKY 862
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 210/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 515 RLEVKDPTRIYRMPEDQVVKRGTTVQLECRVKHDPSLKLTVSW---LKDDEPLYIGNRMK 571
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ + + T F V+E G YT ++ L + V+A + ++P+
Sbjct: 572 KEDDSLTIFGVAERDQGS----YTCMASTELDQDL---AKAYLTVLA-------DQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y I + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVIQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 836 PNLETINLEWDH--PEHPNGILIGYTLK 861
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKTK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|183987806|gb|ACC65887.1| Down syndrome cell adhesion molecule isoform [Daphnia magna]
Length = 1958
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 262/609 (43%), Gaps = 64/609 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRDDS 55
+G I C + PKP+ WKK D I S +I E+G L I + +
Sbjct: 707 AQGSEAKIECKSDGFPKPQISWKKAPGSTPNDYRDIRSNNYVRI-EDGTLSIGNIQKSSE 765
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C A+N G S + + P +E T L+C A E+ + +
Sbjct: 766 GYYLCEASNGIGAGLSAVIFVSVQAPPQFEIKFKNQTARRGEPAVLQCEAKGEKPIGI-- 823
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKT 172
+W N R+ + + G+L I D+ + CV + G T
Sbjct: 824 LWNMNSKRLDSKSDPRYTIREEILPTGVLSDLSIKKLERTDSALFTCVATNAFGSDDTSI 883
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVS 229
+IV+ PP +P GV+V++ S + W+ P+T Y I I++ +W +
Sbjct: 884 NLIVQEPPEVPFGVKVLDKSGRSVQLSWSAPYDGNSPLTRYLIEYKISKGDWQA------ 937
Query: 230 EHVIGKEVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287
++DR + ++ V LVP +TY F+++A N++G +PS + T + P
Sbjct: 938 ------DIDRVLVPGQQTVAGVYNLVPATTYHFRLVAENDVGSSDPSE-TVTIITAEEAP 990
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND--------TEFQSET 339
P + L +SW+P P+E N + Y + ++ EF E
Sbjct: 991 GGTPRGVKVEVVDQNTLKVSWKPPPKEHWNGEILGYYVGYKLATSDKPYLFETVEFSREL 1050
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
KE+ + I+ +++ YT+Y V VQA N VG GP SE V + E P+ APQ V
Sbjct: 1051 GKEH-QLNISHLKM-----YTQYSVVVQAFNRVGAGPMSEEVIQHTGEGTPEQAPQDVTC 1104
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-----WKEDNPEETAVYYLSRTTRNWA 454
S +I ++W+ L + G + G+++ Y W ++ ++ + S T
Sbjct: 1105 TALTSQSIRLSWSSPSLT--TVNGIIKGYKVIYGPSQIWFDETSKDAKIITTSET----- 1157
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++ GL+ T Y ++V+A+ + G+G +S T + P PSAV + P ++ V+W
Sbjct: 1158 ILHGLRKYTNYSMQVLAFTSGGDGVKSTPVSCHTEQDVPGS-PSAVKALLMTPDSILVSW 1216
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
+ +P + Y V + E +D + + L+ + L +RY+ V A
Sbjct: 1217 K--APELPNGIVNQYTVYIQEGTEDARSQKVS----ASQLNYEASGLKKKERYNFWVTAS 1270
Query: 575 SNGGDGRMS 583
+N G+G S
Sbjct: 1271 TNVGEGEPS 1279
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 239/598 (39%), Gaps = 66/598 (11%)
Query: 45 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 104
+ I V SG Y+CTA N G +L V+ P + + P A ++ C
Sbjct: 659 MQIDSVDASHSGNYTCTAQNSAGRASYTAQLTVVVPPRWIVE-PTDKAFAQGSEAKIECK 717
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGEYECVVKS 163
+ ++ W N D ++ + N + I+ G L I N + G Y C +
Sbjct: 718 SDGFPKPQIS--WKKAPGSTPN-DYRDIRSNNYVRIEDGTLSIGNIQKSSEGYYLCEASN 774
Query: 164 TVGK-ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP-ITHYKIIARTNW 221
+G +S V V+ PP E+ + T A G P + +
Sbjct: 775 GIGAGLSAVIFVSVQAPPQF-------EIKFKNQT------ARRGEPAVLQCEAKGEKPI 821
Query: 222 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE--------FKVIAGNELGYGEP 273
W S+ + K RYT R+E VL S + F +A N G +
Sbjct: 822 GILWNMNSKRLDSKSDPRYTIREEILPTGVLSDLSIKKLERTDSALFTCVATNAFGSDDT 881
Query: 274 SSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKND 332
S N +P + P + + +SW P + N+P Y I ++ K D
Sbjct: 882 S-----INLIVQEPPEVPFGVKVLDKSGRSVQLSWS-APYDG-NSPLTRYLIEYKISKGD 934
Query: 333 TEFQSETLKEYGNVGIAVV--RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
+ + + G +A V +P+ T Y ++ A NDVG SE VTI +AE+ P
Sbjct: 935 WQADIDRVLVPGQQTVAGVYNLVPA----TTYHFRLVAENDVGSSDPSETVTIITAEEAP 990
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPE--ETAVYYL 446
P+GV + + V+W P +E+ G ++G+ + Y D P ET +
Sbjct: 991 GGTPRGVKVEVVDQNTLKVSWKPPP--KEHWNGEILGYYVGYKLATSDKPYLFETVEFSR 1048
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506
+ I L+ T+Y V V A+N G GP SE ++ T P++ P V +
Sbjct: 1049 ELGKEHQLNISHLKMYTQYSVVVQAFNRVGAGPMSEEVIQHTGEGTPEQAPQDVTCTALT 1108
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKV-----RVWEVDQDMSRANDTIIPVGNTLDADIVDL 561
++ ++W S + I GYKV ++W D + + II T+ + L
Sbjct: 1109 SQSIRLSWSSPSLTTVNGIIKGYKVIYGPSQIWF---DETSKDAKIITTSETI---LHGL 1162
Query: 562 SPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTL 619
Y M+VLAF++GGDG S+P ++ GSP SA LL+ S L
Sbjct: 1163 RKYTNYSMQVLAFTSGGDGVKSTPVSC----HTEQDVPGSP---SAVKALLMTPDSIL 1213
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+V + C AP P+ WK G + R ++ G+LL+ V+RDD+G Y+CT N++
Sbjct: 1308 DVKLPCQAVGAPLPEIQWKIKGTPYAASERIRLLPEGSLLVREVTRDDAGEYTCTVENMY 1367
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G D +L V P Y PP +++A ++ ++ EE + H
Sbjct: 1368 GQDTVTHQLQV-QAPPY----PPHLSLASTTTTSITIKVKPRKEEETPIHGYTVHYKPEF 1422
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE-----GP 179
G+ + + I L + T + Y+ V++ G + + + ++
Sbjct: 1423 GDWETTQ-------IGNSLQDYTIENLWCGTRYQLYVRAYNGIGTGEGSDVINTRTKGSA 1475
Query: 180 PGLPGGVQVVEVHKTSATIQ---WTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
P +P + +E +S T+ W+DG G P+ ++ + R N W VS V
Sbjct: 1476 PAVPDANRFIEGSASSVTLHLSAWSDG---GCPMLYFVVEYRGKGNQDWTLVSNSV 1528
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 19/185 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTAT 63
G + + C P W+K G ++ R+++F NG L+I V R D G Y+C A
Sbjct: 521 GETMMVTCPVAGYPIDTIQWEKGGRVLPVNRRQQVFPNGTLIIENVQRSLDQGSYTCIAK 580
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAY 115
N G +KG L V + PKI + + QL+C T+ + V
Sbjct: 581 NTQGF-SAKGNLEV------QVMVVPKILPFNFGEEDYTSGMSAQLQCIV-TDGDVPVDI 632
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W +G + L+ + I +++I + + +G Y C +++ G+ S +
Sbjct: 633 RWITSGQT--HSALSGITFTKIGSKSSIMQIDSVDASHSGNYTCTAQNSAGRASYTAQLT 690
Query: 176 VEGPP 180
V PP
Sbjct: 691 VVVPP 695
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T+ CNPE P W KDG + + L I V R+D G+Y C N
Sbjct: 338 GRPATLTCNPEGNPIKSISWMKDGVAMS-------HTDNVLRIEQVRREDKGMYQCFVRN 390
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPK-ITIAAHRNLQ------LRCSAHTEELLDVAYIW 117
++ L + G + PP+ ++ A R LQ L+CSA L +++ W
Sbjct: 391 DQESAQASAELKL--GGRFD---PPQFLSTFAERTLQPGPSVSLKCSASGNPLPEIS--W 443
Query: 118 THNGVRIGNMDLNELE--TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+G +I + + ++ T N L IT D G Y+C S VG
Sbjct: 444 ELDGKKISSSERVQIGHFTAGTNEVVSYLNITAVHTNDGGLYKCSASSKVGHADHSARFN 503
Query: 176 VEGPP 180
V G P
Sbjct: 504 VYGLP 508
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y + V AYN G G S+ RT AP P + I+G + VT + S
Sbjct: 1446 TRYQLYVRAYNGIGTGEGSDVINTRTKGSAPAVPDANRFIEG---SASSVTLHLSAWSDG 1502
Query: 523 EEPIIGYKVRV-WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
P++ + V + +QD + ++++ P GN + ++DLSP Y++RV A +N G
Sbjct: 1503 GCPMLYFVVEYRGKGNQDWTLVSNSVKPGGNFV---VLDLSPATWYNLRVTAHNNAG 1556
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 25/163 (15%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSGIYSC 60
+ + C +A P P F W K + GS ++ + + G L+I +DSG Y C
Sbjct: 246 INLLCPAQAYPAPLFRWYK--YVEGSTAKQPVKLDDRVKQVSGTLIIKEAKVEDSGKYLC 303
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N G ES ++ + P P T+ R L C+ + ++ W +
Sbjct: 304 NVNNSVG-GESVETVLTVTAPLSASIEPQVQTVDYGRPATLTCNPEGNPIKSIS--WMKD 360
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
GV + + D +L I D G Y+C V++
Sbjct: 361 GVAMSHTD-------------NVLRIEQVRREDKGMYQCFVRN 390
>gi|426355367|ref|XP_004045095.1| PREDICTED: protein sidekick-1, partial [Gorilla gorilla gorilla]
Length = 2273
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 252/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 553 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 612
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 613 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 671
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 672 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 727
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W PI +Y I+ + NS W V +G E+
Sbjct: 728 PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 785
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 786 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 838
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 839 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 895
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 896 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 954
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 955 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 1013
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 1014 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 1068
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1069 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSSTIS 1122
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 151/609 (24%), Positives = 230/609 (37%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 463 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLTSGGLRIQKLRPEDSGIFQCFASN 522
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 523 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 582
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ T+ V
Sbjct: 583 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 633
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T+AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 634 TSIVHPPEDHVV-IKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 690
Query: 238 DRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQYNTPAD 285
+ WS Y ++++ GN+ P SP +P
Sbjct: 691 SLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLASPNS 740
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY + + N S
Sbjct: 741 SHSHA-------------VVLSWVRPF---DGNSPILYYIVELSENN-----SPWKVHLS 779
Query: 345 NVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
NVG + V + Y+ +V A+N+VG G S E + E+ P P+ + + G
Sbjct: 780 NVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 839
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 840 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 897
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W F
Sbjct: 898 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQF 957
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P I +L Y VL F+ GDG
Sbjct: 958 INGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDG 1017
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 1018 PPSTPQLVW 1026
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1545 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1602
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1603 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1652
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLKE-------------YGN 345
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1653 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSTFKT 1712
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1713 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1772
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + +TW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1773 LTASQLEITWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1830
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1831 HTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1887
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1888 ANGILQGYRV 1897
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 1029 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 1084
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1085 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGAGLVTSSTISSGVPPDLP-GAPSNL 1136
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1137 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1196
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1197 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1256
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1257 LPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1316
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1317 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1376
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1377 RAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1429
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 191/446 (42%), Gaps = 54/446 (12%)
Query: 159 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 215
V + + T +T+ PP LPG + + + SAT+Q+ G I+ + +
Sbjct: 1106 AAVTAVGAGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIV 1165
Query: 216 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 268
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1166 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIV 1214
Query: 269 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 325
G S S T P AP+ + L + W PLP + N ++ Y+I
Sbjct: 1215 GPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIK 1274
Query: 326 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESE 379
+WR ++ QS + + + R+ EF + EYE+++QA N VG GP SE
Sbjct: 1275 YWR----SDLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSE 1325
Query: 380 VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE 439
VV + E +P AP+ V + +ST I +TW + +N G ++G++I + +D
Sbjct: 1326 VVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDP 1383
Query: 440 ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPS 498
E + + AL+ GL+ Y ++V+A+ G G P + LERT AP PP
Sbjct: 1384 EPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPV 1442
Query: 499 AVHIKGINPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL- 554
+ + T+V + W+ EEP I+GY++ S T + VG T+
Sbjct: 1443 RLVFPEVRLTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVR 1495
Query: 555 DADIVDLSPGKRYHMRVLAFSNGGDG 580
+L+P Y R+ A + G G
Sbjct: 1496 QFTATNLAPESAYIFRLSAKTRQGWG 1521
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 194/493 (39%), Gaps = 49/493 (9%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1410 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1469
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1470 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATN-------LAPESAYIFRLSAKTRQGWG 1521
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1522 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1580
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1581 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1638
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK---------------- 434
P V + ++++ + W P E++ G L G+RI Y +
Sbjct: 1639 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKTLKS 1696
Query: 435 ------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
E + T S +T + L+ +Y V + AYN GE P S
Sbjct: 1697 PIALRAELTAQSTFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFV 1756
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
AP P V + + + + +TW P + I GYK+ WE D ++
Sbjct: 1757 GEAAPAMAPQNVQVTPLTASQLEITWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVL 1816
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSAS 608
+ + + +L+ +Y + + AF+ GDG S P Q G + G+P+ + S
Sbjct: 1817 FLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPRSDP----QQGRTHQAAPGAPSFLAFS 1871
Query: 609 TTLLLVMSSTLYI 621
+ S+TL +
Sbjct: 1872 E----ITSTTLNV 1880
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1959 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 2012
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 2013 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2064
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 279 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTGDTGAYYVQAVNEKNGENKTSPFIH 338
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 339 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 396
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 397 -------TSGLHSFGRRLTISNPTSADTGPYVC 422
>gi|380805053|gb|AFE74402.1| protein sidekick-2 precursor, partial [Macaca mulatta]
Length = 905
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 220/503 (43%), Gaps = 35/503 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 413 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 472
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V YIW
Sbjct: 473 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEK 531
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G ++ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 532 DGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 586
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W ++
Sbjct: 587 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPW-----TILLAS 640
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 641 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 697
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 698 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 757
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 758 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 812
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 813 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 870
Query: 471 AYNNAGEGPESERYLERTYRKAP 493
+ G+GP S L RT+ P
Sbjct: 871 CFTTPGDGPRSAPQLVRTHEDVP 893
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 362 YEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y+ ++ A+NDVG G ++E V++ E+ P PQ V + G + +I + W P
Sbjct: 659 YQFRLCAVNDVGKGQFSKDTERVSL--PEEPPTAPPQNVIASGRTNQSIMIQWQPPPESH 716
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+N G L G+ I+Y P ++ N L+ L T Y ++V AYN+AG G
Sbjct: 717 QN--GILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 774
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S + E T + P PP VH + N TT+ TW SP F GYK+ WE +Q
Sbjct: 775 VYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQ 834
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKR----YHMRVLAFSNGGDGRMSSPAI 587
+ T P N D+ V G + Y VL F+ GDG S+P +
Sbjct: 835 EEEVTMVTARP--NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSAPQL 885
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 109/287 (37%), Gaps = 37/287 (12%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 125 GEAAVIHAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 184
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 185 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 244
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +G+ L + I+ L I N + +DAG YEC + S+V +
Sbjct: 245 LHIIWKKDGM---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVV 295
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 296 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 344
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
V +++ R+ R + ++ + LVP T F+ A N G + S+
Sbjct: 345 AVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAGEVQTST 391
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 324 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNA 383
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 384 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 440
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 441 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 490
>gi|332864595|ref|XP_518946.3| PREDICTED: protein sidekick-1 [Pan troglodytes]
Length = 2213
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 252/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 493 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 552
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 553 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 611
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 612 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 667
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W PI +Y I+ + NS W V +G E+
Sbjct: 668 PHSPQNLLASPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 725
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 726 TGIT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 778
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 779 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 835
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 836 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 894
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 895 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 953
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 954 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 1008
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1009 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGAGLVTSSTIS 1062
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 150/614 (24%), Positives = 228/614 (37%), Gaps = 81/614 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 403 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 462
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 522
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT------- 172
VRI L ++ G L+I DAG Y C +T G ++
Sbjct: 523 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 573
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
T IV P V + T+AT+ GAT+ ++ + + N T + S V
Sbjct: 574 TSIVHPPE------DHVVIKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIV 625
Query: 233 IGKEVDRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQY 280
+ K+ + WS Y ++++ GN+ P SP
Sbjct: 626 VEKDGSLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLL 675
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+P A + +SW P N+P +YY + + N S
Sbjct: 676 ASPNSSHSHA-------------VVLSWVRPF---DGNSPILYYIVELSENN-----SPW 714
Query: 340 LKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG 396
NVG + + + Y+ +V A+N+VG G S E + E+ P P+
Sbjct: 715 KVHLSNVGPEMTGITVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKN 774
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+ + G + +I V W P N G L G+ ++Y P E ++ N+ L+
Sbjct: 775 IVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLV 832
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L T+Y ++V AYN AG G S E T + P PP V + +N TT+ W
Sbjct: 833 TDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNP 892
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFS 575
F GYK+ W D + TI P I +L Y VL F+
Sbjct: 893 PPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFT 952
Query: 576 NGGDGRMSSPAITF 589
GDG S+P + +
Sbjct: 953 TPGDGPPSTPQLVW 966
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ K+ ++E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKMLKSPIALRAELTAQSSFKT 1652
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1712
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1713 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1770
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1771 HTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1827
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1828 ANGILQGYRV 1837
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 969 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 1024
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1025 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGAGLVTSSTISSGVPPDLP-GAPSNL 1076
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E + IP
Sbjct: 1077 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLEIP 1136
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ + W P
Sbjct: 1137 NLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVP 1196
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+RIKYW+ D +S I L+ +Y +++ A+N
Sbjct: 1197 LPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFN 1256
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1257 AVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILF 1316
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1317 RAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1369
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 189/437 (43%), Gaps = 54/437 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSS 1163
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y+I +WR ++
Sbjct: 1164 RVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----SD 1219
Query: 335 FQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAED 388
QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1220 LQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRES 1274
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1275 VPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVRG 1332
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINP 507
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1333 NHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRL 1391
Query: 508 TTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSP 563
T+V + W+ EEP I+GY++ S T + VG T+ DL+P
Sbjct: 1392 TSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLAP 1444
Query: 564 GKRYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1445 ESAYIFRLSAKTRQGWG 1461
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 195/493 (39%), Gaps = 49/493 (9%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELP 1520
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1578
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-------------- 436
P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1579 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKMLKS 1636
Query: 437 ----NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1637 PIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFV 1696
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
AP P V + + + + VTW P + I GYK+ WE D ++
Sbjct: 1697 GEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVL 1756
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSAS 608
+ + + +L+ +Y + + AF+ GDG S P Q G + G+P+ + S
Sbjct: 1757 FLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPRSDP----QQGRTHQAAPGAPSFLAFS 1811
Query: 609 TTLLLVMSSTLYI 621
+ S+TL +
Sbjct: 1812 E----ITSTTLNV 1820
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P V V +TS ++W D NG P + Y+I W S
Sbjct: 1162 SSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRS 1218
Query: 224 TWFNVSEHVIGKEV-DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
++ + + V DR +E +IE + YE ++ A N +G G P S + T
Sbjct: 1219 ---DLQSSAVAQVVSDRL--EREFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1271
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1272 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR 1331
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1332 --GNHTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1388
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1389 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFT-ATDL 1442
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1443 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1502
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A +VD L P Y +R+ A ++ G
Sbjct: 1503 SDGASPIRYFTVQVRELPRGEWQTYSSSI--SHEATACVVDRLRPFTSYKLRLKATNDIG 1560
Query: 579 DGRMSS 584
D SS
Sbjct: 1561 DSDFSS 1566
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 139/345 (40%), Gaps = 18/345 (5%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE + A N +G S+P + A P AP + L ++W+P P E QN
Sbjct: 1673 YEVIMTAYNIIGESPASAPVEVFVGEA-APAMAPQNVQVTPLTASQLEVTWDPPPPESQN 1731
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 377
YKI++ + D++ ++E +K + VVR+ + +T+Y V + A N G GP
Sbjct: 1732 GNIQGYKIYYWEA-DSQNETEKMKVL-FLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPR 1789
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437
S+ + + P AP + ST +NV+W E N G L G+R+ Y
Sbjct: 1790 SDPQQGRTHQAAPG-APSFLAFSEITSTTLNVSWG--EPAAAN--GILQGYRVVYEPLAP 1844
Query: 438 PEETAVYYLSRTTRNWALIVGLQPDTK---YYVKVMAYNNAGEGPESERYLERTYRKAPQ 494
+ + NW + ++ TK Y+ +V A GPE L+ P
Sbjct: 1845 VQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQA-RTITYGPE----LQANITAGPA 1899
Query: 495 K-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNT 553
+ P + + + +T ++ + P GY + D+ + IP T
Sbjct: 1900 EGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSAT 1959
Query: 554 LDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+D L G Y RV+A + G G S+P+ E F
Sbjct: 1960 SYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIH 278
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 279 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 336
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 337 -------TSGLHSFGRRLTISNPTSADTGPYVC 362
>gi|432866114|ref|XP_004070705.1| PREDICTED: neural cell adhesion molecule L1-like protein-like
[Oryzias latipes]
Length = 1245
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 233/502 (46%), Gaps = 36/502 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTAT 63
G N+ I C+ ++P W K+ +I +G R F+N +L I DSG Y C
Sbjct: 433 GDNIVINCSVFSSPPASISWIKEEAVI-TGERFSTFDNNQSLKIINAEESDSGKYECVVK 491
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI--WTHNG 121
N G S L+ + P+ P I + +L C ++ L+ +++ W +G
Sbjct: 492 NTEGTS-SITALLDVKDPTKIVSPPENKQIIIGTSAKLVCKVTYDKSLEGSFVMEWRKDG 550
Query: 122 VRIGNMDLNELETPNINIDGGL-LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L E + I G L+I N + D G Y C+ ++++ ++ +IV P
Sbjct: 551 EEI----LLSEENSSRYIRGDHNLQIMNVNLRDQGMYTCIARTSLDEVRATALIIVLDVP 606
Query: 181 GLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTN-WN-STWFNVSEHVIGKEV 237
P ++++E+ + + I W G+ + +T + + N W W KE+
Sbjct: 607 DAPERLKIIEIKDSRNIVISWKPGSDHNSSVTEFVVEYEENQWEPGGW---------KEL 657
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R G +A+ E L Y+F+V A N +G G PS PS ++NT P + P I
Sbjct: 658 KRVPG-NQATAELALYGNLRYQFRVYAVNAIGPGPPSEPSERHNTDPTVPDRNPENIKIQ 716
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
G + ISW+PL + N P + YK+ +R+ + +E L + + V P+
Sbjct: 717 GHIPYQMEISWDPLLPTESNGPGLEYKVSYRRLKVEDAWTEYLVQRPSY--VVNGTPA-- 772
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ YE+KVQA N G PE +VVT +S ED P APQ V N+TA+ V+W ++
Sbjct: 773 -FAPYEIKVQARNSFGWAPEPKVVTGYSGEDRPATAPQDVAVEVINTTALRVSWT--QVP 829
Query: 418 RENIRGRLIGHRIKYWKED---NPEETAVYYLSRT---TRNWALIVGLQPDTKYYVKVMA 471
+RG L G+ + + + +PE+ S + ++A++ GL+P ++Y + V
Sbjct: 830 PATVRGHLGGYEVHWVRTRSFLDPEKILNEKQSMSFPGNGSYAIVPGLKPYSEYKLTVRV 889
Query: 472 YNNAGEGPESERYLERTYRKAP 493
+N+ G GP S+ T AP
Sbjct: 890 FNSKGNGPTSDPVTFSTPEGAP 911
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +V I C+ P P W+++G + S +++ ++ +++ DSG+Y C A
Sbjct: 340 GSDVHIKCSVGGKPPPDITWRRNGELFRDDSENNKRVLDD-TVVLHKAKSQDSGVYQCEA 398
Query: 63 TNVHGMDESKGRLIVLHG-PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-- 119
+N HG + ++V+ P + + + N+ + CS + +++I
Sbjct: 399 SNPHGRILANINILVMSKPPQILTKDVQEYAVILGDNIVINCSVFSSPPASISWIKEEAV 458
Query: 120 -NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G R D N+ L+I NA +D+G+YECVVK+T G S + V+
Sbjct: 459 ITGERFSTFDNNQ-----------SLKIINAEESDSGKYECVVKNTEGTSSITALLDVKD 507
Query: 179 P 179
P
Sbjct: 508 P 508
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 18/255 (7%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N +GPGP SE + + +P P+ + +G + ++W+P+ N
Sbjct: 677 YQFRVYAVNAIGPGPPSEPSERHNTDPTVPDRNPENIKIQGHIPYQMEISWDPLLPTESN 736
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G + +++ Y + + Y + R + ++ G Y +KV A N+ G PE
Sbjct: 737 --GPGLEYKVSYRRLKVEDAWTEYLVQRPSY---VVNGTPAFAPYEIKVQARNSFGWAPE 791
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-----RVWE 535
+ + P P V ++ IN T + V+W V P+ + GY+V R +
Sbjct: 792 PKVVTGYSGEDRPATAPQDVAVEVINTTALRVSWTQVPPATVRGHLGGYEVHWVRTRSFL 851
Query: 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595
+ + ++ GN A + L P Y + V F++ G+G S P +TF E
Sbjct: 852 DPEKILNEKQSMSFPGNGSYAIVPGLKPYSEYKLTVRVFNSKGNGPTSDP-VTFSTPE-- 908
Query: 596 EFKSGSPALYSASTT 610
G+P L TT
Sbjct: 909 ----GAPGLLPILTT 919
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 154/392 (39%), Gaps = 49/392 (12%)
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP---ADKPYQAPSRIGG 296
Y ++ + + N ++ YE KV A N G+ +P P+ T D+P AP +
Sbjct: 758 YLVQRPSYVVNGTPAFAPYEIKVQARNSFGW----APEPKVVTGYSGEDRPATAPQDVAV 813
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY------GNVGIAV 350
L +SW +P Y++ W + + L E GN A+
Sbjct: 814 EVINTTALRVSWTQVPPATVRGHLGGYEVHWVRTRSFLDPEKILNEKQSMSFPGNGSYAI 873
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
V P Y+EY++ V+ N G GP S+ VT + E P + P + + + S ++ +
Sbjct: 874 V--PGLKPYSEYKLTVRVFNSKGNGPTSDPVTFSTPEGAPGLLPI-LTTSDYKSDSVLLV 930
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT---TRNWALIVGLQPDTKYYV 467
W P + G L+ + + E E + ++ T W L GL ++Y +
Sbjct: 931 WGPPLATNGILSGYLLQYHL--LNESTLEVIDSHEINITGADITQWQL-TGLNSGSRYRI 987
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG-INPTTVHVTWRYVSPSFEEEPI 526
+ A A GP L + P+ P+ ++I ++ T ++W E +
Sbjct: 988 HLRACTKASCGPP----LSQESETLPETVPALLNISSYVSDTFAKISWTATEKQRELQLY 1043
Query: 527 IGYKVRVWEVDQDMSRANDTIIPV-GNTLDAD--------------IVD-LSPGKRYHMR 570
+ Y ++ + A ++ + GN D I+D L PG +Y +R
Sbjct: 1044 VAYM-----NNRKLLFAVPNLLYIYGNLSDGKWHFSEAVNASQSFHIIDGLKPGTKYTVR 1098
Query: 571 VLAFSNGGDGRMSSPAITFQM-GEEKEFKSGS 601
++A + + I Q+ GE K K S
Sbjct: 1099 LMAKNLLDNASFFEDVIQTQVKGESKGHKGAS 1130
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 8/177 (4%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C P P W K G + + F N L +S V D G Y C A+
Sbjct: 249 KGEELQLECITAGLPTPDVTWMKMGEKLPDQAKLSNF-NKTLTVSAVEETDQGRYMCKAS 307
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + P ++ ++CS + D+ W NG
Sbjct: 308 NSAGETVHYFHVIVEEPPVWLGDPPQGQITPVGSDVHIKCSVGGKPPPDIT--WRRNGEL 365
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ N N + + + A D+G Y+C + G+I ++V P
Sbjct: 366 FRDDSEN-----NKRVLDDTVVLHKAKSQDSGVYQCEASNPHGRILANINILVMSKP 417
>gi|350588710|ref|XP_003357453.2| PREDICTED: neurofascin-like, partial [Sus scrofa]
Length = 1197
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 406 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 463
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 464 AENQVRLEV-KDPTRIYRMPEDQVAQRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 522
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 523 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 573
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 574 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 627
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 628 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 685
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 686 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 738
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 739 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 797
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 798 EWD----HPEHPNGILIGYTLKY 816
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 209/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 305 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 362
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 363 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 413
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 414 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 468
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + + T R + H + T +W E +
Sbjct: 469 RLEVKDP------TRIYRMPEDQVAQRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 518
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + E+ L + E + +A EL + ++P+
Sbjct: 519 -------YIGNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 571
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 572 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 621
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 622 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 678
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 679 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 730
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 731 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQ 789
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 790 PNLETINLEWDH--PEHPNGILIGYTLK 815
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P W K G + S + N L I+ VS +DSG Y C A+N
Sbjct: 215 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKLENFNKALRITNVSEEDSGEYFCLASN 274
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ V W NG +
Sbjct: 275 KMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGEPL 331
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
+ N PN + G + + + Y+C + G + V +++ PP +
Sbjct: 332 QSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRM 386
>gi|354467816|ref|XP_003496364.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Cricetulus
griseus]
Length = 2126
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 159/603 (26%), Positives = 252/603 (41%), Gaps = 51/603 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ I+ SG R + E+G L I+PV D+G Y+
Sbjct: 403 DGMTAVLKCEVSGAPKPAITWKRGNLILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 462
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N + L V + S ++ I L C A + + Y+W
Sbjct: 463 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTTLRYVWKK 521
Query: 120 NGVRIGNMDLNELETPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ NM + + I + DG LL I+ D G+Y C + S G S + V
Sbjct: 522 D-----NMVITPSSSSRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVI 575
Query: 178 GPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW----FNVSEH 231
P P + + VH S T+ W P+ +Y I+ + NS W NVS
Sbjct: 576 ELPHPPQNLLASLSPVHSHSVTLSWVRPFDGNSPVLYY-IVQLSENNSPWKVHLSNVSPE 634
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ G V L P TY+F+V A N++G G+ S+ + + P + P P
Sbjct: 635 MTGITVSG------------LTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPP 682
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAV 350
I G + + W+P P + N Y + +R E Q + + +
Sbjct: 683 KNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNY 739
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ +T+YE++V A N G G S VT ++ + +P PQ V + NST ++
Sbjct: 740 CLVTDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFL 799
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVK 468
WNP ++ I G G+++ W D PE V ++ + I L+ T Y+
Sbjct: 800 WNPPP--QQFINGINQGYKLLAWPADTPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTS 857
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPI 526
V+ + G+GP S L T+ KP + H+ I T++ V+W+ P I
Sbjct: 858 VLCFTTPGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLERNGII 912
Query: 527 IGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+GY++ WEV ++ SR T+ T + I LS Y + V A + G G +S
Sbjct: 913 MGYQIS-WEVYGKNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAAGVGLTTSS 969
Query: 586 AIT 588
I+
Sbjct: 970 TIS 972
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1395 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1452
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1453 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1502
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ K+ + ++E + +
Sbjct: 1503 SSVLIQWQPPRDESLNGLLQGYRIYYRELESEAGMGSEAKTHKSPSALRAELTAQSSFKT 1562
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1563 VNSSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTP 1622
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + I L
Sbjct: 1623 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSRNETEKMKVLFLPEPVVKIKNLTS 1680
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP+S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1681 HTKYQVSISAFNAAGDGPKSDPRQGRTHQAAP-GPPSFLAFSEITSTTLNVSWG--EPSA 1737
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1738 ANGILQGYRV 1747
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 153/609 (25%), Positives = 236/609 (38%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P P W KD + R ++ +G+L I +S +DSGI+ C A N
Sbjct: 313 SVDIPCRAMGVPLPTLQWYKDAVPLNKLQNLRYRVLPSGSLHIQKLSPEDSGIFQCFANN 372
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY-----IWTH 119
G ++ L V + + Q P T+ L+C + + I
Sbjct: 373 EGGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLKCEVSGAPKPAITWKRGNLILAS 432
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L I DAG Y C +T ++ + V
Sbjct: 433 GSVRIPRFML---------LESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNR 483
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P +VV + T+AT+ GAT+ RT W + +
Sbjct: 484 TSIVHPPEDRVV-IKGTTATL--CCGATHD---------PRTTLRYVWKKDNMVITPSSS 531
Query: 238 DRYTGRKEASIENVLVPWS------TYEFKVIAGNE-----LGYGEPSSPSPQYNTPADK 286
R K+ S+ + WS T E GN+ L E P PQ +
Sbjct: 532 SRIVVEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHP-PQNLLASLS 589
Query: 287 PYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQ---SETLKE 342
P + S +++SW P N+P +YY I +N++ ++ S E
Sbjct: 590 PVHSHS-----------VTLSWVRPF---DGNSPVLYY-IVQLSENNSPWKVHLSNVSPE 634
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
+ ++ + P+ Y + +V A+N VG G S E + E+ P P+ + + G
Sbjct: 635 MTGITVSGL-TPARTY----QFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASG 689
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E +S N+ L+ L
Sbjct: 690 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLII 747
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 748 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQF 807
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P + + I +L Y VL F+ GDG
Sbjct: 808 INGINQGYKLLAWPADTPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDG 867
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 868 PPSTPQLVW 876
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 166/416 (39%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + P+ II + +S V GK
Sbjct: 879 EDKPGAVGHLSFTEILDTSLKVSWQE------PLERNGIIMG-------YQISWEVYGKN 925
Query: 237 VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
R T ++ L +TY V A G G +S + P D P APS
Sbjct: 926 DSRLTHTLNSTTHEYKIQGLSSLTTYTIDVAAVTAAGVGLTTSSTISSGVPPDLP-GAPS 984
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ ++ + P K + D E +E +
Sbjct: 985 NLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQTLE 1044
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTW 411
IP+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W
Sbjct: 1045 IPNLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRW 1104
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+R+KYW+ D P ++ I L+ T+Y +++ A
Sbjct: 1105 VPLPDSQYNGNPESVGYRVKYWRSDQPSSVLAQVVNDRLERELTIEELEEWTEYELRMQA 1164
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1165 FNAIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKI 1224
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1225 LYRAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1279
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 191/443 (43%), Gaps = 49/443 (11%)
Query: 159 CVVKSTVGKISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI 215
V + VG ++T +T+ PP LPG + + + SAT+Q+ G I + +
Sbjct: 957 AVTAAGVG-LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIV 1015
Query: 216 IARTNWNSTWFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNEL 268
+ IG E V Y E + + L P++ Y F++ N +
Sbjct: 1016 EGQVG-----------AIGDEEEWVTLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIV 1064
Query: 269 GYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI- 325
G S S T P AP+ I L + W PLP + N ++ Y++
Sbjct: 1065 GPSPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVK 1124
Query: 326 FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS 385
+WR + ++ + + + I +TEYE+++QA N +G GP SE+V +
Sbjct: 1125 YWRSDQPSSVLAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRT 1181
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
E +P AP+ V + +ST I +TW + +N G ++G++I Y +D E +
Sbjct: 1182 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILYRAKDLDPEPRSHV 1239
Query: 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKG 504
+ AL+ GL+ Y ++V+A+ G G P S LERT P PP +
Sbjct: 1240 VRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPE 1298
Query: 505 INPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRAND---TIIPVGNTL-DAD 557
+ T V + W+ EEP I+GY++ ++R + T + VG T+
Sbjct: 1299 VRLTAVRIVWQP-----PEEPNGVILGYQIAY-----RLARGSPHTFTTVEVGATVRQFT 1348
Query: 558 IVDLSPGKRYHMRVLAFSNGGDG 580
+L+P Y R+ A + G G
Sbjct: 1349 ATELAPESAYIFRLSAKTRQGWG 1371
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 187/469 (39%), Gaps = 53/469 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1288 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLARGSPHTFTTVE--VGATVR 1345
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1346 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1397
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1398 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1455
Query: 358 YYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1456 -FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPP 1512
Query: 415 ELIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + ++ E TA + L
Sbjct: 1513 R--DESLNGLLQGYRIYYRELESEAGMGSEAKTHKSPSALRAELTAQSSFKTVNSSSTLT 1570
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1571 TYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1630
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYK+ WE D ++ + + I +L+ +Y + +
Sbjct: 1631 TWDPPPPESQNGNIQGYKIYYWEADSRNETEKMKVLFLPEPV-VKIKNLTSHTKYQVSIS 1689
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
AF+ GDG S P + G + G P+ + S + S+TL +
Sbjct: 1690 AFNAAGDGPKSDP----RQGRTHQAAPGPPSFLAFSE----ITSTTLNV 1730
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 179/425 (42%), Gaps = 29/425 (6%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P + V +TS ++W D NG P + Y++ W S
Sbjct: 1072 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRV---KYWRS 1128
Query: 224 TW-FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
+V V+ ++R E +IE + + YE ++ A N +G G P S + T
Sbjct: 1129 DQPSSVLAQVVNDRLER-----ELTIEELEEW-TEYELRMQAFNAIGAG-PWSELVRGRT 1181
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1182 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILYRAKDLDPEPRSHVVR 1241
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P S ++ + +D P + VF
Sbjct: 1242 --GNHTQSAL-LAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTPGPPVRLVFPE 1298
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
TA+ + W P E G ++G++I Y +P + T R + L
Sbjct: 1299 -VRLTAVRIVWQP----PEEPNGVILGYQIAYRLARGSPHTFTTVEVGATVRQFT-ATEL 1352
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1353 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1412
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
S PI + V+V E+ + + I T A + L P Y +R+ A ++ GD
Sbjct: 1413 SDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACA-VERLRPFTSYKLRLKATNDIGD 1471
Query: 580 GRMSS 584
S+
Sbjct: 1472 SDFSA 1476
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1810 EGSPGSPRNVLVTK-STSELTLQWTEGNAGNTPTTGYVIEARPSDEGLW-----DMFAKD 1863
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1864 IPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSTAVSAQAEAPF 1914
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I D+G Y A N +
Sbjct: 127 SCPRPQVTWFREGHKIIPSSRIAITLENQLVILATKASDAGAYYVQAVNERNGENKTSPF 186
Query: 76 IVL---HGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I L E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 187 IHLSIARDTGTPEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSLYWKRNGVRL 246
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 247 ---------TSGLHSFGRRLTISNPTSADTGLYVC 272
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 9 TIFCNPEAAP--KPKFVWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 62
T+ C A P + WK++G + SG GRR L IS + D+G+Y C A
Sbjct: 222 TLECIANARPVEELSLYWKRNGVRLTSGLHSFGRR-------LTISNPTSADTGLYVCEA 274
Query: 63 T---NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
T + +K L ++ P + + +I ++ + C A L + W
Sbjct: 275 TLRGSTFEPARAKAFLSIIEPPYFTAEPESRILGEVEESVDIPCRAMGVPLPTLQ--WYK 332
Query: 120 NGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ V LN+L+ + G L I S D+G ++C + G+I T T + V
Sbjct: 333 DAV-----PLNKLQNLRYRVLPSGSLHIQKLSPEDSGIFQCFANNEGGEIQTHTYLDV 385
>gi|348568334|ref|XP_003469953.1| PREDICTED: protein sidekick-1 [Cavia porcellus]
Length = 2115
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 251/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ NI+ SG R + E+G L I+PV D+G Y+
Sbjct: 397 DGMTAVLRCEVSGAPKPAVTWKRGNNILASGSVRIPRFMLLESGGLQITPVFIQDAGNYT 456
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S ++ I L C A + + + Y+W
Sbjct: 457 CYALNTEGSLNASATLTVWNRTSIIHPPEDRVVIKG-TTAALHCGATHDPRISLRYVWKK 515
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 516 DNAVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIEL 571
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + H + + W P+ HY I+ + NS W V +G E+
Sbjct: 572 PHPPQNLLASLSPSHSHAVVLSWVRPFDGNSPVLHY-IVELSENNSPW-KVHLSDVGPEM 629
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 630 TGIT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 682
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 683 GRTNQSIMVQWQPPPETEHNGVLHGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTDL 739
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S V ++ + +P PQ V + NST + WNP
Sbjct: 740 IIWTQYEIQVAAYNGAGLGVFSRAVAEYTLQGVPTAPPQNVQAEAVNSTTVQFLWNPPP- 798
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 799 -QQFINGINQGYKLLAWPADVPEAVTVLTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTT 857
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 858 PGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYRIS 912
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G +++ I+
Sbjct: 913 -WEVYGKNDSRLTHTL--NSTTHEYKIRGLSSLTTYTIEVAAVTAAGMGLVTTSTIS 966
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 155/364 (42%), Gaps = 47/364 (12%)
Query: 180 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVI 233
P P +QV EV S +QW G+ PI ++ + R W + ++S
Sbjct: 1381 PAPPRELQVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHDAT 1440
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
V+R L P+++Y+ ++ A N++G SS + T D P + P
Sbjct: 1441 ACAVER------------LRPFTSYKLRLKATNDIGDSNFSSETEAVTTLQDVPGEPPGS 1488
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSET 339
+ + I W+P E N Y+I++R+ K+ + ++E
Sbjct: 1489 VSATPHTTSSVLIQWQPPRDESLNGLLQGYRIYYRELESEAGTSPEAKMLKSPSALRAEL 1548
Query: 340 LKE--YGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ + V + E Y YEV + A N +G P S V +F E P +A
Sbjct: 1549 TAQSSFKTVNSSSTLTTYELTHLKKYRRYEVIMTAYNVIGESPASAPVEVFVGEAAPAMA 1608
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET---AVYYLSRTT 450
PQ + ++ + VTW+P +N G + G++I YW+ N ET V +L T
Sbjct: 1609 PQNIQVTPLTASQLEVTWDPPPPESQN--GNIQGYKIYYWEAGNRNETEKMKVLFLPEPT 1666
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ L TKY V + A+N AG+GP S+ RT++ AP S + I TT+
Sbjct: 1667 VK---LKNLTSHTKYLVSISAFNAAGDGPRSDPRQGRTHQAAPGA-LSFLAFSEITSTTL 1722
Query: 511 HVTW 514
+V+W
Sbjct: 1723 NVSW 1726
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 170/414 (41%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 873 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYRI----SWEVYGKNDSRLTHTLN 928
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y R +S+ +TY +V A G G ++ + P D P APS +
Sbjct: 929 STTHEYKIRGLSSL-------TTYTIEVAAVTAAGMGLVTTSTISSGVPPDLP-GAPSNL 980
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E ++ IP
Sbjct: 981 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVCLYEEENEPDAQMLEIP 1040
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1041 NLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVP 1100
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P ++ I L+ T+Y +++ A+N
Sbjct: 1101 LPDSQYNGNPESVGYRVKYWRLDLPSSALAQVVNDRLERELTIEELEEWTEYELQMQAFN 1160
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1161 AIGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILY 1220
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1221 RAKDLD-PEPRTHVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPFI 1273
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 195/439 (44%), Gaps = 35/439 (7%)
Query: 156 EYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPIT 211
E V + +G ++T T I G PP LPG + + + SAT+Q+ G I+
Sbjct: 948 EVAAVTAAGMGLVTTST--ISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSIS 1005
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
+ + + + E V E + + I N L P++ Y F++ N +G
Sbjct: 1006 RWIVEGQVG---AIGDEEEWVCLYEEENEPDAQMLEIPN-LTPYTHYRFRMRQVNIVGPS 1061
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWR 328
S S T P AP+ I L + W PLP + N ++ Y++ +WR
Sbjct: 1062 PFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWR 1121
Query: 329 KKNDTEFQSETLKEYGNVGIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ S L + N + + I +TEYE+++QA N +G GP SEVV + E
Sbjct: 1122 ----LDLPSSALAQVVNDRLERELTIEELEEWTEYELQMQAFNAIGAGPWSEVVRGRTRE 1177
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P AP+ V + +ST I +TW + +N G ++G++I Y +D E + +
Sbjct: 1178 SVPSAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILYRAKDLDPEPRTHVVR 1235
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
AL+ GL+ Y ++V+A+ G G P S LERT AP PP + +
Sbjct: 1236 GNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPFILERTKDDAP-GPPVRLVFPEVR 1294
Query: 507 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRAND-TIIPVGNTL-DADIVDL 561
T+V + W+ EEP I+GY++ SR + T + VG T+ +L
Sbjct: 1295 LTSVRIVWQP-----PEEPNGVILGYQI---AYRLASSRPHTFTTVEVGATVRQFTATEL 1346
Query: 562 SPGKRYHMRVLAFSNGGDG 580
+P Y R+ A + G G
Sbjct: 1347 APESAYVFRLSAKTRQGWG 1365
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 100/230 (43%), Gaps = 4/230 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 643 YQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 702
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 703 --GVLHGYILRYRLAGLPGEHQQRNITSPEVNYCLVTDLIIWTQYEIQVAAYNGAGLGVF 760
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TTV W F GYK+ W D
Sbjct: 761 SRAVAEYTLQGVPTAPPQNVQAEAVNSTTVQFLWNPPPQQFINGINQGYKLLAWPADVPE 820
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ TI P + + I +L Y VL F+ GDG S+P + +
Sbjct: 821 AVTVLTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVW 870
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 172/434 (39%), Gaps = 47/434 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P + EV TS I W I Y+I R +S + +G V +
Sbjct: 1282 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGVILGYQIAYRLA-SSRPHTFTTVEVGATVRQ 1340
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1341 FTATE-------LAPESAYVFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELQVPQA 1392
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEFY 358
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1393 EVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHDATACAVERLRP--- 1449
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1450 FTSYKLRLKATNDIGDSNFSSETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPPR 1507
Query: 416 LIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL-- 455
E++ G L G+RI Y + ++ E TA + L
Sbjct: 1508 --DESLNGLLQGYRIYYRELESEAGTSPEAKMLKSPSALRAELTAQSSFKTVNSSSTLTT 1565
Query: 456 --IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L+ +Y V + AYN GE P S AP P + + + + + VT
Sbjct: 1566 YELTHLKKYRRYEVIMTAYNVIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEVT 1625
Query: 514 WRYVSPSFEEEPIIGYKVRVWEV--DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
W P + I GYK+ WE + + +P + +L+ +Y + +
Sbjct: 1626 WDPPPPESQNGNIQGYKIYYWEAGNRNETEKMKVLFLPEPT---VKLKNLTSHTKYLVSI 1682
Query: 572 LAFSNGGDGRMSSP 585
AF+ GDG S P
Sbjct: 1683 SAFNAAGDGPRSDP 1696
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G+ P T + I AR + W + K+
Sbjct: 1804 EGSPGSPKDVLVTK-STSDLTLQWTEGSPGNSPTTGFVIEARPSDEGLW-----DMFVKD 1857
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPS PSP + + P+
Sbjct: 1858 IPRSATSYTISLDK-LRQGVTYEFRVVAANEAGYGEPSRPSPAVSAQVEAPF 1908
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD I R ++ +G L I + +DSGI+ C A+N
Sbjct: 308 VDIMCRAMGVPLPTLQWYKDAVSINKLQNPRYQVLPSGGLRIQKLHPEDSGIFQCFASNE 367
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + + Q P T+ LRC V + +N + G
Sbjct: 368 GGEIQTHTYLDVTNVAPTFIQCPADTTVTDGMTAVLRCEVSGAPKPAVTWKRGNNILASG 427
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ + + ++ G L+IT DAG Y C +T G ++ T+ V
Sbjct: 428 SVRIPRF----MLLESGGLQITPVFIQDAGNYTCYALNTEGSLNASATLTV 474
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 188/458 (41%), Gaps = 33/458 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P + V +T
Sbjct: 1033 DAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSITVRTASET 1092
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 249
S ++W D NG P + Y++ W ++ + + V DR +E +IE
Sbjct: 1093 SLRLRWVPLPDSQYNGNPESVGYRV---KYWR---LDLPSSALAQVVNDRL--ERELTIE 1144
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1145 ELEEW-TEYELQMQAFNAIGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1202
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E ++ ++ GN + + + + YE++V A
Sbjct: 1203 SVPEQDQNGLILGYKILYRAKDLDPEPRTHVVR--GNHTQSAL-LAGLRKFVLYELQVLA 1259
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S + + +D P + VF T++ + W P E G ++G
Sbjct: 1260 FTRIGNGVPSSPFILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGVILG 1314
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y P + T R + L P++ Y ++ A G G E +
Sbjct: 1315 YQIAYRLASSRPHTFTTVEVGATVRQFT-ATELAPESAYVFRLSAKTRQGWGEPLEATVI 1373
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + V+V E+ + +
Sbjct: 1374 TTEKRERPAPPRELQVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSS 1433
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
I T A + L P Y +R+ A ++ GD SS
Sbjct: 1434 SISHDATACA-VERLRPFTSYKLRLKATNDIGDSNFSS 1470
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 121 SCPRPQVTWFREGHKIIPSNRIAITLENQLVILSTTASDAGAYYVQAVNERNGENKTSPF 180
Query: 76 IVL---HGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I L E + P I +A +R++ L C A + +++ W NGVR+
Sbjct: 181 IHLSIARDMGTPEAMAPVIVVAPGNRSVVAGSSETTLECIASARPVEELSVHWKRNGVRL 240
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + D G Y C
Sbjct: 241 ---------TSGLHSFGRRLTISNPTSTDTGLYVC 266
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 9 TIFCNPEAAPKPKFV--WKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCTA 62
T+ C A P + WK++G + SG GRR L IS + D+G+Y C A
Sbjct: 216 TLECIASARPVEELSVHWKRNGVRLTSGLHSFGRR-------LTISNPTSTDTGLYVCEA 268
Query: 63 T---NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
T + +K L ++ P + + +I + + + C A L + W
Sbjct: 269 TLRGSAFEPARAKAFLSIIEPPYFTAEPESRILVEVEETVDIMCRAMGVPLPTLQ--WYK 326
Query: 120 NGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ V I N+L+ P + G L I D+G ++C + G+I T T + V
Sbjct: 327 DAVSI-----NKLQNPRYQVLPSGGLRIQKLHPEDSGIFQCFASNEGGEIQTHTYLDV 379
>gi|47211487|emb|CAF95092.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1278
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 259/639 (40%), Gaps = 99/639 (15%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGR---RKIFENGNLLISPVSRDDSGIYSCTAT 63
N + C PKP W +G I S + R + + ++ V S +Y C A+
Sbjct: 432 NGRLVCRANGNPKPNIQWLINGQPIESSPQNPSRDVLGD-TIIFRSVQMGSSAVYQCNAS 490
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPK---ITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
N +G S + VL P L PK I + + + L C L D+ W N
Sbjct: 491 NQYGYLLSNAFVSVLDMPP--RMLGPKNQLIKVIENNHTFLDCPFFGSPLPDLR--WFKN 546
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G G +D N G LEI A D G Y CV S +GK + + V+
Sbjct: 547 GQGSG-VDGGHYSVHN----NGTLEIKRARSEDEGTYTCVASSLLGKAENQVRLEVKEEA 601
Query: 181 GLPGGVQVVEVHKT---------------SATIQWTDGATNGRPITHYKI-IARTNWN-S 223
L V S + W G N P+TH+ + W
Sbjct: 602 SLNPSVSSALPPDRPDPPLELDLSDPAVRSVRLTWIPGNDNRSPVTHFLVQFEEDRWEPG 661
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
W N+S Y G + I L P+ Y+F+VIA N +G EPS PSPQY T
Sbjct: 662 RWRNLSS---------YPGHLNSVILQ-LAPFVNYQFRVIAINSVGQSEPSLPSPQYKTS 711
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY 343
P P + G G G++ I+WEPL ++N N+YY ++W++K+ +E ++
Sbjct: 712 GAAPDVIPRGLRGWGSMKGNMEITWEPLLDLERNGANLYYSVWWKRKDTSE-------DW 764
Query: 344 GNVGIAVVRIPSEFYYTE----YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
NV VR + TE Y++K+QA N+ G GPES ++ +S ED P AP +
Sbjct: 765 NNV--TTVRTKHVVHNTETYVPYQIKIQAGNEFGSGPESNIIIGYSGEDTPTDAPTELRV 822
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIK--------------------------YW 433
++ ++ W ++L ++++G +R++ YW
Sbjct: 823 SRVDTNRAHIHWKSVDL--KSVQGEFKEYRVRQRHTEFIIAVCWSFPKIVCCSSPQLYYW 880
Query: 434 KED--------NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYL 485
++ N E+ + S + L+ L P +KY + ++ N EGP S +
Sbjct: 881 RDSSLVPGLAVNKEKQTKGFYSTVSEPSTLLSELVPFSKYKMFMVVANTHYEGPPSNT-V 939
Query: 486 ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-QDMSRAN 544
E T ++ P I N TVH+ W P +IGY+++ V+ + RA
Sbjct: 940 EFTTKEGVPDAPRFFTINRKNVDTVHLEWG--KPLEPNGILIGYQLKYQTVNGSTVGRAQ 997
Query: 545 -DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582
+T +P + D + RY + A + G G +
Sbjct: 998 FETFLPNVTEFTLRLPDRA--ARYKFYLSAVTQVGSGEV 1034
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 115/565 (20%), Positives = 225/565 (39%), Gaps = 89/565 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGN--LLISPVSRDDSGIYSCT 61
G + + C P P W + G G RK+ FEN N LL+ VS +D+G Y C
Sbjct: 340 GQQLLLECIAAGVPTPTIKWYRKG---GDLPERKVKFENFNKTLLVVGVSEEDAGEYVCM 396
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N H L+ + Y+ P + +A + N +L C A+ ++ W NG
Sbjct: 397 AIN-HQGSIRHSILVQVKAAPYWLDKPTNLVLAPNENGRLVCRANGNPKPNIQ--WLING 453
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
I + N P+ ++ G + + + Y+C + G + + V +++ PP
Sbjct: 454 QPIESSPQN----PSRDVLGDTIIFRSVQMGSSAVYQCNASNQYGYLLSNAFVSVLDMPP 509
Query: 181 GLPG-GVQVVEVHKTSAT-------------IQW-TDGATNGRPITHYKI---------I 216
+ G Q+++V + + T ++W +G +G HY +
Sbjct: 510 RMLGPKNQLIKVIENNHTFLDCPFFGSPLPDLRWFKNGQGSGVDGGHYSVHNNGTLEIKR 569
Query: 217 ARTNWNSTWFNVSEHVIGKEVD--RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS 274
AR+ T+ V+ ++GK + R ++EAS+ N V + + EL +P+
Sbjct: 570 ARSEDEGTYTCVASSLLGKAENQVRLEVKEEASL-NPSVSSALPPDRPDPPLELDLSDPA 628
Query: 275 SPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE 334
+ + ++W +P +P ++ + + +
Sbjct: 629 --------------------------VRSVRLTW--IPGNDNRSPVTHFLVQFEEDRWEP 660
Query: 335 FQSETLKEY-GNVGIAVVRIPSEFYYTEYEVKVQAINDVG------PGPESEVVTIFSAE 387
+ L Y G++ ++++ + Y+ +V AIN VG P P+ + ++
Sbjct: 661 GRWRNLSSYPGHLNSVILQLAP---FVNYQFRVIAINSVGQSEPSLPSPQYK-----TSG 712
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
P V P+G+ G + +TW P+ + N G + + + + ++D E+ +
Sbjct: 713 AAPDVIPRGLRGWGSMKGNMEITWEPLLDLERN--GANLYYSVWWKRKDTSED---WNNV 767
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507
T R ++ + Y +K+ A N G GPES + + P P+ + + ++
Sbjct: 768 TTVRTKHVVHNTETYVPYQIKIQAGNEFGSGPESNIIIGYSGEDTPTDAPTELRVSRVDT 827
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVR 532
H+ W+ V + Y+VR
Sbjct: 828 NRAHIHWKSVDLKSVQGEFKEYRVR 852
>gi|345305290|ref|XP_001513017.2| PREDICTED: protein sidekick-1 [Ornithorhynchus anatinus]
Length = 2113
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 252/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ I+ SG R + E+G L I+PV D+G Y+
Sbjct: 423 DGMTAVLTCEVSGAPKPAITWKRGDQILASGSVQIPRFILLESGGLQIAPVFLHDAGNYT 482
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P I + L C A + + + Y W
Sbjct: 483 CYAINAEGSLNANAMLTVWNRTSIVHP-PEDIVVIKGTTATLLCGATHDPRISIRYFWKK 541
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G+ I + + L I+ DG LL I+ D G+Y C + S G S + V
Sbjct: 542 DGIIIKSAASSRLM---ISKDGSLL-ISQTWSGDIGDYTCEIVSVGGNDSKMARLEVIEL 597
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W P+ +Y I+ + NS W V +
Sbjct: 598 PHSPQNLMASLNSSHSRTVILSWVRPFDGNSPLLYY-IVELSENNSPW-----KVHLSNI 651
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
D T +I + L P TY+F+V A N++G G+ S + + P + P P I
Sbjct: 652 DPKT--MSVTISD-LTPARTYQFRVCAVNQVGKGQYSMETSRLMLPEEPPSAPPKNIVAS 708
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + I +
Sbjct: 709 GRTNQSIMVQWQPPPETEHNGILHGYNLRYRLAGLPGEYQHRNIT---SPEINYCLVKDL 765
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 766 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEALNSTTIRFLWNPPP- 824
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W PE V ++ + I L+ T Y V+ +
Sbjct: 825 -QQFINGINQGYKLMAWPVSVPEAIIVVTIAPDFHGVHNGYITNLKKFTAYLTSVVCFTT 883
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP+S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 884 PGDGPQSPPQLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIITGYQIS 938
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR ++ T + I LS Y + V A + G G ++S I+
Sbjct: 939 -WEVYSRNDSRLTHSL--NSTTHEYKIKGLSSLTTYTIDVAAVTIKGIGLVTSSTIS 992
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP+ YT Y +++ +N VGP P S+ + + + P +AP + R + T++
Sbjct: 1062 MLEIPNLTPYTHYRFRMRQVNVVGPSPFSQSSRVIQTLQAPPDIAPGSITVRTASETSLW 1121
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+R+KYW+ D V ++ I L+ T+Y ++
Sbjct: 1122 LRWVPLPDSQYNGNPESVGYRVKYWRTDLHSSVLVQVINNRLERECTIEELEEWTEYELQ 1181
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP SE RT P P V ++ ++ T + +TW V + I+G
Sbjct: 1182 IQAFNAIGAGPWSEALRGRTRESVPSAAPENVSVEAVSSTQILLTWAAVPEQDQNGLILG 1241
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
YK+ D D S ++ +T + L Y ++VLAF+ G+G S+P IT
Sbjct: 1242 YKILYKAKDLD-SEPQTYVVRGNHTQSVLLAGLRKYVLYEIQVLAFTRIGNGVPSAPPIT 1300
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 53/355 (14%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V S +QW G+ PI ++ + R + W S + EA++
Sbjct: 1419 KVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSI----------SHEATVC 1468
Query: 250 NV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ L P+++Y+ ++ A N++G + S + T D P + PS I + I
Sbjct: 1469 VIERLNPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSSISVTPHTTSSVLIQ 1528
Query: 308 WEPLPREKQ-NAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
W+P PR+K N + Y+I++R+ + K N I
Sbjct: 1529 WKP-PRDKSLNGLLVGYRIYYRELDYETGSGPESKTVTNPSALRAEI------------- 1574
Query: 367 QAINDVGPGPESEVVTIFSAEDM-------PQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
P+S T+ S+ + P +AP V ++ + +TW+P L +
Sbjct: 1575 --------SPQSSFKTVNSSSALTTYELTPPAMAPLNVQVNTLTASQLEITWDPPPLESQ 1626
Query: 420 NIRGRLIGHRIKYWKEDNP---EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
N G + G++I Y +EDN E+ V +L TT + L TKY V + A+N AG
Sbjct: 1627 N--GNIQGYKIYYQEEDNSNTTEKIKVLFLPETTIK---LKNLTSHTKYLVSISAFNAAG 1681
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+GP+S L TY+ AP PS + I TT++V+W P+ + GY+V
Sbjct: 1682 DGPKSSPRLGTTYQAAPNA-PSFLAFSEITSTTLNVSWG--EPTAANGILQGYRV 1733
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 182/428 (42%), Gaps = 36/428 (8%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWT---DGATNGRPITHYKIIARTNW 221
+ T +T+ PP LPG + + + SAT+Q+ DG T+ +
Sbjct: 985 LVTSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSTSKWIVEGQVGAIGD 1044
Query: 222 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
+ W + E + + I N L P++ Y F++ N +G S S
Sbjct: 1045 DEEWVGLYEK------ENEPDAQMLEIPN-LTPYTHYRFRMRQVNVVGPSPFSQSSRVIQ 1097
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSE 338
T P AP I L + W PLP + N ++ Y++ +WR T+ S
Sbjct: 1098 TLQAPPDIAPGSITVRTASETSLWLRWVPLPDSQYNGNPESVGYRVKYWR----TDLHSS 1153
Query: 339 TLKEYGNVGIAV-VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGV 397
L + N + I +TEYE+++QA N +G GP SE + + E +P AP+ V
Sbjct: 1154 VLVQVINNRLERECTIEELEEWTEYELQIQAFNAIGAGPWSEALRGRTRESVPSAAPENV 1213
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV 457
+ST I +TW + +N G ++G++I Y +D E Y + L+
Sbjct: 1214 SVEAVSSTQILLTWAAVPEQDQN--GLILGYKILYKAKDLDSEPQTYVVRGNHTQSVLLA 1271
Query: 458 GLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
GL+ Y ++V+A+ G G P + ERT AP PP + + T+V + W+
Sbjct: 1272 GLRKYVLYEIQVLAFTRIGNGVPSAPPITERTKDDAP-GPPVRLVFPEVKLTSVRIVWQP 1330
Query: 517 VSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVL 572
EEP I+GY++ S T + VG+T+ + DL+P Y R
Sbjct: 1331 -----PEEPNGIILGYQIAYRLAAS--SPNTFTTVEVGSTIRQFMATDLTPESAYIFRTS 1383
Query: 573 AFSNGGDG 580
A + G G
Sbjct: 1384 AKTRQGWG 1391
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 41/420 (9%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G +
Sbjct: 1308 PGPPVRLVFPEVKLTSVRIVWQPPEEPNGIILGYQIAYRLAASSPNTFTTVE--VGSTIR 1365
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++ L P S Y F+ A G+GEP + ++P PS +
Sbjct: 1366 QFMATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPSELLIPQ 1417
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
K+ S+ + +P ++P Y+ + R+ D E+Q+ + + V+ + F
Sbjct: 1418 SKVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSSSISHEATVCVIERLNPF- 1476
Query: 359 YTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++++A ND+G E+E VT +D+P P + ++++ + W P
Sbjct: 1477 -TSYKLRLKATNDIGDSDFSVETEAVTTL--QDVPGEPPSSISVTPHTTSSVLIQWKPPR 1533
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDTKYYVKVMAYNN 474
+++ G L+G+RI Y + D ET S+T N AL + P + +
Sbjct: 1534 --DKSLNGLLVGYRIYYRELD--YETGSGPESKTVTNPSALRAEISPQSSF--------- 1580
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP--IIGYKVR 532
+ S L P P V + + + + +TW P E + I GYK+
Sbjct: 1581 --KTVNSSSALTTYELTPPAMAPLNVQVNTLTASQLEITWD--PPPLESQNGNIQGYKIY 1636
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI--TFQ 590
E D + ++ + T + +L+ +Y + + AF+ GDG SSP + T+Q
Sbjct: 1637 YQEEDNSNTTEKIKVLFLPET-TIKLKNLTSHTKYLVSISAFNAAGDGPKSSPRLGTTYQ 1695
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 199/457 (43%), Gaps = 33/457 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + PG + V +T
Sbjct: 1059 DAQMLEIPNLTPYTHYRFRMRQVNVVGPSPFSQSSRVIQTLQAPPDIAPGSITVRTASET 1118
Query: 195 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y++ RT+ +S+ V VI ++R E +IE
Sbjct: 1119 SLWLRWVPLPDSQYNGNPESVGYRVKYWRTDLHSS---VLVQVINNRLER-----ECTIE 1170
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + + T P AP + + ++W
Sbjct: 1171 ELEEW-TEYELQIQAFNAIGAG-PWSEALRGRTRESVPSAAPENVSVEAVSSTQILLTWA 1228
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI ++ K+ D+E Q+ ++ GN +V+ + Y YE++V A
Sbjct: 1229 AVPEQDQNGLILGYKILYKAKDLDSEPQTYVVR--GNHTQSVL-LAGLRKYVLYEIQVLA 1285
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P + +T + +D P + VF T++ + W P E G ++G
Sbjct: 1286 FTRIGNGVPSAPPITERTKDDAPGPPVRLVFPE-VKLTSVRIVWQP----PEEPNGIILG 1340
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + + L P++ Y + A G G E +
Sbjct: 1341 YQIAYRLAASSPNTFTTVEVGSTIRQF-MATDLTPESAYIFRTSAKTRQGWGEPLEATVI 1399
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PPS + I ++ + +++ S PI + V+V E+ + +
Sbjct: 1400 TTEKRERPAPPSELLIPQSKVSSRSLQLQWIPGSDGSSPIRYFTVQVRELPDGEWQTYSS 1459
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
I T+ I L+P Y +R+ A ++ GD S
Sbjct: 1460 SISHEATV-CVIERLNPFTSYKLRLKATNDIGDSDFS 1495
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 134/619 (21%), Positives = 226/619 (36%), Gaps = 113/619 (18%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
PKP+ W +DG+ I R I L+I + D+G Y A N + I
Sbjct: 149 PKPQVTWFRDGHKIIPSHRVAITLENQLVILATTTSDAGGYYVQAVNEKNGENKTSPFIY 208
Query: 78 LHGPSYYEQ---------LPPKIT--IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L + +PP T +A + L C A+ + +++ W NGV+I
Sbjct: 209 LSVANENNASRPVAPVIVIPPCNTSVVAGSSEITLECIANARPVEELSVTWKRNGVKI-- 266
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL- 182
T I+ G L I+N + +D G Y C K S K + + PP
Sbjct: 267 -------TSGIHSFGRRLTISNPTSSDIGMYICEAKLKDSAFETARAKAYLSIIEPPYFT 319
Query: 183 --PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P + EV KT + G P+ N W+ S + + RY
Sbjct: 320 AEPMSRILTEVDKTVDLL----CQAMGVPVP----------NLEWYKDSVPISKLQNPRY 365
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT-PADKPYQAPS 292
S++ L P + F+ A NE G Y E ++ +P ++ PAD +
Sbjct: 366 KLLMSGSLQIQKLHPDDSGIFQCFARNEAGEIQTHTYLEATNIAPTFSQRPAD------T 419
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND------TEFQSETLKEYGNV 346
+ G + +S P P I W++ + + L E G +
Sbjct: 420 TVTDGMTAVLTCEVSGAPKP-----------AITWKRGDQILASGSVQIPRFILLESGGL 468
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
IA V + YT Y AIN G + ++T+++ + V +G +T
Sbjct: 469 QIAPVFLHDAGNYTCY-----AINAEGSLNANAMLTVWNRTSIVHPPEDIVVIKGTTATL 523
Query: 407 I-NVTWNPIELIRENIRGRLIGHRIKYWKED----NPEETAVYYLSR-----TTRNWALI 456
+ T +P R +IR +WK+D ++ +S+ ++ W+
Sbjct: 524 LCGATHDP----RISIR--------YFWKKDGIIIKSAASSRLMISKDGSLLISQTWSGD 571
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAV-HIKGINPTTVHVTWR 515
+G Y ++++ G + + P P + + + + TV ++W
Sbjct: 572 IG-----DYTCEIVSV-----GGNDSKMARLEVIELPHSPQNLMASLNSSHSRTVILSW- 620
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
V P P++ Y V + E + I P T+ I DL+P + Y RV A +
Sbjct: 621 -VRPFDGNSPLLYYIVELSENNSPWKVHLSNIDP--KTMSVTISDLTPARTYQFRVCAVN 677
Query: 576 NGGDGRMSSPAITFQMGEE 594
G G+ S + EE
Sbjct: 678 QVGKGQYSMETSRLMLPEE 696
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 175 IVEGPP-GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+ GP G PG Q + V K+++ +QWT+G + P T + I A+ + W
Sbjct: 1790 VTAGPAEGSPGSPQDIFVSKSASDLILQWTEGNSGDTPTTGFIIEAKPSDEGLW-----D 1844
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ K++ R +++ L +YEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1845 MFVKDIPRSATSYTVALDK-LKQGVSYEFRVVAVNEFGYGEPSSPSAAVSAQLETPF 1900
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P W KD I R K+ +G+L I + DDSGI+ C A N
Sbjct: 334 VDLLCQAMGVPVPNLEWYKDSVPISKLQNPRYKLLMSGSLQIQKLHPDDSGIFQCFARNE 393
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L + + Q P T+ L C + + + G
Sbjct: 394 AGEIQTHTYLEATNIAPTFSQRPADTTVTDGMTAVLTCEVSGAPKPAITWKRGDQILASG 453
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ + I ++ G L+I DAG Y C + G ++ + V
Sbjct: 454 SVQIPRF----ILLESGGLQIAPVFLHDAGNYTCYAINAEGSLNANAMLTV 500
>gi|237858623|ref|NP_001153786.1| neurofascin isoform 1 precursor [Rattus norvegicus]
gi|38372259|sp|P97685.2|NFASC_RAT RecName: Full=Neurofascin; Flags: Precursor
Length = 1240
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 844 EWD----HPEHPNGILIGYTLRY 862
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFEED-- 668
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 669 -QFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 836 PNLETINLEWDH--PEHPNGILIGYTLR 861
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|427797293|gb|JAA64098.1| Putative neural cell adhesion molecule l1, partial [Rhipicephalus
pulchellus]
Length = 1345
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 154/688 (22%), Positives = 269/688 (39%), Gaps = 135/688 (19%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN--- 64
VT+ C AP+P+ W K+ + +GGR ++ ++G+L I + D G Y+C A+N
Sbjct: 422 VTLRCRVFGAPRPEVKWMKEAQEL-TGGRYRVLDSGDLQIDDLLVTDQGEYTCYASNKFG 480
Query: 65 ---VHGMDESKGRLIVLHGPSYYE------------------------------------ 85
G E KG+ ++ P YE
Sbjct: 481 DASASGSLEVKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEA 540
Query: 86 -----------------QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
Q P +AA ++ RC+A + L++ W NG +
Sbjct: 541 DARMXGSLEVKGKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDP-- 598
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV 188
E + + L IT D+G Y CV ++ + + T+ V+ P P V++
Sbjct: 599 --EADARMVQAGDNSLTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKI 656
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEAS 247
+ A ++W PI Y I T+++ TW + ++ +
Sbjct: 657 -DCDGLMALVEWKPTGDRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDT---------K 706
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + PW+ Y F+V+A N++G PS S + TP D P++ P R+ G G + +L I+
Sbjct: 707 FKVSMSPWANYTFRVVARNKIGPSLPSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLIT 766
Query: 308 WEPLPREKQNAPNIYYKIFWRKKN--DTEFQSETLK--------EYGNVGIAVVRI---- 353
W P+P + NAP +YK+ W++ + D + S ++ EYG RI
Sbjct: 767 WTPMPPIEHNAPGFFYKVLWKRDDIPDATWNSRIIEDWKQNRHVEYGQPTFKPYRIKVEA 826
Query: 354 --------------------------PSEF----------YYTEYEVKVQAINDVGPGPE 377
P +F + Y +KV+A N G
Sbjct: 827 HNRRGQAHTAATEVIGYSGENVPLAAPQDFKLANVVDARXXFKPYRIKVEAHNRRGQAHT 886
Query: 378 SEVVTI-FSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 435
+ I +S E++P APQ + ++ N TW+P+ E++RG G++I+ W
Sbjct: 887 AATEVIGYSGENVPLAAPQDFKLANVVDARTANFTWSPVS--PESVRGHFRGYKIQTWTP 944
Query: 436 DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495
D EE + A + +P ++ V V+ +N+ GP S+ T P
Sbjct: 945 DEGEEKLREVVVPANVTTATVSLFRPFSRNLVHVLVFNDMYNGPPSDSIEFSTPEGVP-G 1003
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD-QDMSRANDTIIPVGNTL 554
P ++ + T +++ W+ P + GY + EV + + PV + L
Sbjct: 1004 PVASFEGIPMGSTGIYLLWK--RPLETNGVLTGYHIYYEEVRGTQLGPKMERQPPVRDPL 1061
Query: 555 D--ADIVDLSPGKRYHMRVLAFSNGGDG 580
+ A + L P +Y + + A + G G
Sbjct: 1062 ESRAKLAGLKPRTKYRITIHAATAQGQG 1089
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 114/599 (19%), Positives = 195/599 (32%), Gaps = 103/599 (17%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYS 59
A G + ++C P P+ W K G RR + N L I VS +D G Y
Sbjct: 231 ALRGHELKLYCIYGGTPLPQISWSKRG--ANPTSRRFTYSNYGKTLEIRSVSFEDEGTYE 288
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G+ ++ + + Y+ ++P A ++ C+A + + W
Sbjct: 289 CQANNGVGVAQTHAMHVKVEAAPYWLRVPDNTNAAEEESVSFECAATG--IPEPKLQWFV 346
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + + N P ++G LL I + D Y+C + G + ++
Sbjct: 347 NGVPVEKAEPN----PRRKVEGPLLTIEALTKRDTAVYQCNASNPHGYAFRDFYLNVLAL 402
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP + T A Q T R ++ W ++ + G
Sbjct: 403 PPTI-----------TEAPEQLTLAVVTSRVTLRCRVFGAPRPEVKWMKEAQELTGGRY- 450
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS------------SPSPQYNTPADK 286
R + I+++LV E+ A N+ G S P Y ADK
Sbjct: 451 RVLDSGDLQIDDLLVT-DQGEYTCYASNKFGDASASGSLEVKGKTLITQPPENYEVAADK 509
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
A R +L I W +F + D E +
Sbjct: 510 --SATFRCNAEADPSLELKIEW----------------LFNGQPVDPEADARMXGSLEVK 551
Query: 347 GIAVVRIPSEFY--YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
G ++ P E Y + + + P E ++ +F+ + + A + G NS
Sbjct: 552 GKTLITQPPENYEVAADKSATFRCNAEADPSLELKIEWLFNGQPVDPEADARMVQAGDNS 611
Query: 405 TAINVTW------------------------------NPIELIRENI------------- 421
I T NP ++++ +
Sbjct: 612 LTITRTIELDSGIYTCVARTELDSDRAQATLTVQDVPNPPQMVKIDCDGLMALVEWKPTG 671
Query: 422 --RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
R ++ + I+Y +P+ +++ + V + P Y +V+A N G
Sbjct: 672 DRRAPILSYSIQYNTSFSPDTWEDAFVNIPAPDTKFKVSMSPWANYTFRVVARNKIGPSL 731
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
P T P K P V +G + +TW + P P YKV +W+ D
Sbjct: 732 PSGASSRCTTPEDVPHKNPDRVMGRGDRFDNLLITWTPMPPIEHNAPGFFYKV-LWKRD 789
>gi|149058634|gb|EDM09791.1| neurofascin, isoform CRA_g [Rattus norvegicus]
Length = 1234
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 446 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 503
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 504 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 562
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 563 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 613
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 614 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 667
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 668 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 725
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 726 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 778
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 779 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPS-APRRFRVRQPNLETINL 837
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 838 EWD----HPEHPNGILIGYTLRY 856
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 345 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 402
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 403 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 453
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 454 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 508
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 509 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 558
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 559 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 611
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 612 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFEED-- 662
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 663 -QFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 718
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 719 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 770
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 771 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSA-PRRFRVRQ 829
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 830 PNLETINLEWDH--PEHPNGILIGYTLR 855
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 255 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 312
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 313 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 369
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 370 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 425
Query: 182 L 182
+
Sbjct: 426 M 426
>gi|149058630|gb|EDM09787.1| neurofascin, isoform CRA_c [Rattus norvegicus]
Length = 1250
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 462 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 519
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 520 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 578
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 579 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 629
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 630 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 683
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 684 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 741
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 742 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 794
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 795 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPS-APRRFRVRQPNLETINL 853
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 854 EWD----HPEHPNGILIGYTLRY 872
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 361 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 418
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 419 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 469
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 470 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 524
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 525 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 574
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 575 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 627
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 628 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFEED-- 678
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 679 -QFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 734
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 735 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 786
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 787 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSA-PRRFRVRQ 845
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 846 PNLETINLEWDH--PEHPNGILIGYTLR 871
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 271 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 328
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 329 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 385
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 386 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 441
Query: 182 L 182
+
Sbjct: 442 M 442
>gi|440913028|gb|ELR62536.1| Protein sidekick-1, partial [Bos grunniens mutus]
Length = 2033
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 238/561 (42%), Gaps = 51/561 (9%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNV 65
+ C AP+P VW + +I+ SG R + E+G L I+PVS D+G Y+C A N
Sbjct: 400 LRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVSIQDAGSYTCHAANS 459
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + S P + + L C A + + + Y+W + V I
Sbjct: 460 EGSLDASAMLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKKDNVVIA 518
Query: 126 NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185
+ + + DG LL I+ D G+Y C V S G S + V P P
Sbjct: 519 PSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIELPHSPQN 574
Query: 186 V--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
+ + H + + W P+ +Y I+ + NS W V +G E+ T R
Sbjct: 575 LVASLNPAHSHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVGPEMTGVTVR 632
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
L P TY+F+V A N++G G+ S+ + + P + P P I G
Sbjct: 633 G-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQS 685
Query: 304 LSISWEPLPREKQN------------APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + W+P P + N AP Y++ E+Q + + ++
Sbjct: 686 IMVQWQPPPEPEHNGVLRGYILRQVAAPGHAYRL---AGLPGEYQQRNIS---SPEVSYC 739
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ +T+YE++V A N G G S VT ++ + +P PQ V NST I W
Sbjct: 740 LVTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLW 799
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKV 469
NP ++ I G G+++ W +D PE V ++ + I L+ T Y+ V
Sbjct: 800 NPPP--QQFINGINQGYKLLAWPDDVPEAVTVVTIAPDFHGVHHGYITNLKKFTAYFTSV 857
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPII 527
+ + G+GP S L T+ KP + H+ I T++ V+W+ P + I
Sbjct: 858 LCFTTPGDGPPSTPQLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIIT 912
Query: 528 GYKVRVWEV-DQDMSRANDTI 547
GY+V WEV Q SR T+
Sbjct: 913 GYQVS-WEVYGQSTSRLTLTL 932
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP YT Y +++ N VG GP S+ + + + P VAP + R + T++
Sbjct: 1041 MLEIPDLTPYTHYRFRMRQANVVGAGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLR 1100
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIKYW+ D P +S + GL+ T+Y ++
Sbjct: 1101 LRWVPLPDSQYNGNPESVGYRIKYWRLDLPSAVLTQVISDRLEREFTVEGLEEWTEYELQ 1160
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP S RT P P V + ++ T + +TW V + I+G
Sbjct: 1161 MQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILG 1220
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D ++ +T A + L Y ++VLAF+ G+G S P I
Sbjct: 1221 YKILFRAKDLD-PEPRSHVVRGNHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSVPPI 1278
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 50/364 (13%)
Query: 180 PGLPGGVQV--VEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVI 233
P P +QV +V S ++W G+ PI ++ + + R W + ++S
Sbjct: 1386 PAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQLRELPRGQWQTYSSSISHEAT 1445
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
V+R L P+++Y+ ++ A N++G + S+ + T D P + P
Sbjct: 1446 ACVVER------------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRS 1493
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK--------- 341
+ + I W+P E N Y+I++R+ + +S+TLK
Sbjct: 1494 VSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAEL 1553
Query: 342 ----EYGNVGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393
+ V + E Y YEV + A N +G GP S V +F E +
Sbjct: 1554 TAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGEGPASAPVEVFVGEAGALGS 1613
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED---NPEETAVYYLSRTT 450
P + T P+ L ++R +I YW+ D + E+ V +L TT
Sbjct: 1614 PAPAWWPPVPRLRRGAT--PLSLPASSLRS---SRQIYYWEADSQNDTEKMRVLFLPETT 1668
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
A + L TKY V + A+N AG+GP SE T++ AP PS + I TT+
Sbjct: 1669 ---AKLKNLTSHTKYLVSISAFNAAGDGPRSEPQPGCTHQAAPGT-PSFLAFSEITSTTL 1724
Query: 511 HVTW 514
+V+W
Sbjct: 1725 NVSW 1728
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 101/236 (42%), Gaps = 12/236 (5%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 640 YQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHN 699
Query: 421 --IRGRLI------GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+RG ++ GH Y P E +S ++ L+ L T+Y ++V AY
Sbjct: 700 GVLRGYILRQVAAPGH--AYRLAGLPGEYQQRNISSPEVSYCLVTELIIWTQYEIQVAAY 757
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N AG G S E T + P PP V ++ +N TT+ W F GYK+
Sbjct: 758 NGAGLGVFSRAVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYKLL 817
Query: 533 VWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
W D + TI P + + I +L Y VL F+ GDG S+P +
Sbjct: 818 AWPDDVPEAVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQL 873
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWN 222
S++ ++ PP + P + V +TS ++W D NG P + Y+I R +
Sbjct: 1071 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRLDLP 1130
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
S V VI ++R E ++E L W+ YE ++ A N +G G P S + + T
Sbjct: 1131 SA---VLTQVISDRLER-----EFTVEG-LEEWTEYELQMQAFNAIGAG-PWSAAVRGRT 1180
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P QN + YKI +R K+ D E +S ++
Sbjct: 1181 RESVPSAAPENVSAEAVSSTQILLTWASVPEPDQNGLILGYKILFRAKDLDPEPRSHVVR 1240
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + + +D P + VF
Sbjct: 1241 --GNHTQSAL-LAGLGKFVLYELQVLAFTRIGNGVPSVPPILERTKDDAPGPPVRLVFPE 1297
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1298 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQFT-ATEL 1351
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + + T + R+V
Sbjct: 1352 APESAYVFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELQVPQADVTARSLCLRWVPG 1411
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + +++ E+ + + + I + A +V+ L P Y +R+ A ++ G
Sbjct: 1412 SDGASPIRYFTLQLRELPRGQWQTYSSSI--SHEATACVVERLRPFTSYKLRLKATNDIG 1469
Query: 579 DGRMSS 584
D S+
Sbjct: 1470 DSDFSA 1475
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
NV I C P P W KD I R ++ G L + + +DSGI+ C A+N
Sbjct: 304 NVDIVCEAMGVPPPALQWFKDAISINKLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASN 363
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTH 119
G ++ L V + + QLP T+ LRC + ++I
Sbjct: 364 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGTTAVLRCEVSGAPRPAIVWSRGSHILAS 423
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I S DAG Y C ++ G + + V
Sbjct: 424 GSVRIPRFML---------LESGGLQIAPVSIQDAGSYTCHAANSEGSLDASAMLTV 471
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+ WT+G P T Y I AR + W + K+
Sbjct: 1806 EGSPGSPRDVSVTK-STSELTLHWTEGQAGRTPTTGYVIEARPSDEGLW-----DMFAKD 1859
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1860 IPRGATAYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAKVETPF 1910
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 109/290 (37%), Gaps = 35/290 (12%)
Query: 320 NIYYKIFWR--KKNDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDV 372
IYY W +NDTE F ET + N+ +T+Y V + A N
Sbjct: 1644 QIYY---WEADSQNDTEKMRVLFLPETTAKLKNLT----------SHTKYLVSISAFNAA 1690
Query: 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY 432
G GP SE + + P FS ST +NV+W E + N G L G+R+ Y
Sbjct: 1691 GDGPRSEPQPGCTHQAAPGTPSFLAFSE-ITSTTLNVSWG--EPVAAN--GVLQGYRVVY 1745
Query: 433 WKEDNPEETAVYYLSRTTRNWALIVGLQPDTK---YYVKVMAYNNAGEGPESERYLERTY 489
+ + NW + ++ TK Y+ +V A A GPE L+
Sbjct: 1746 EPLAPVQGVSKVVTVDVKGNWPRWLKVRDLTKGVTYFFRVQARTIA-YGPE----LQANV 1800
Query: 490 RKAPQK-PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
P + P + + +T +T + P GY + D+ + I
Sbjct: 1801 TAGPAEGSPGSPRDVSVTKSTSELTLHWTEGQAGRTPTTGYVIEARPSDEGLWDMFAKDI 1860
Query: 549 PVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
P G T +D L G Y RV+A + G G SSP+ E F
Sbjct: 1861 PRGATAYTVSLDQLRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAKVETPF 1910
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 38/164 (23%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN----------- 64
+ P+P+ W +DG+ I R I L+I + D+G Y A N
Sbjct: 118 SCPRPQVTWFRDGHKIIPSSRIAITLENQLVILAAAASDAGAYYVQAVNERNGENKTSPP 177
Query: 65 VH-------GMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAY 115
VH GM E+ +IV +PP + +A L C A+ +++
Sbjct: 178 VHLSIARDTGMPEAVAPIIV---------VPPSNRSVVAGSSETTLECIANARPAEELSV 228
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
W NGVR+ T ++ G L I+N + +D G Y C
Sbjct: 229 TWKRNGVRV---------TTGLHGFGRRLTISNPTSSDTGVYVC 263
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 146/370 (39%), Gaps = 61/370 (16%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE +V+A +G G PS P T D P P R+ ++ + I W+P E+ N
Sbjct: 1258 YELQVLAFTRIGNGVPSVPPILERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP--PEEPN 1314
Query: 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE------YEVKVQAIND 371
+ Y+I +R + + T++ VG A VR +F TE Y ++ A
Sbjct: 1315 GIILGYQIAYRLASSSPNTFTTVE----VG-ATVR---QFTATELAPESAYVFRLSAKTR 1366
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQ---GVFSRGFNSTAINVTW-------NPIELIRENI 421
G G E T+ + E + AP V + ++ + W +PI +
Sbjct: 1367 QGWGEPLEA-TVITTEKRERPAPPRELQVPQADVTARSLCLRWVPGSDGASPIRYFTLQL 1425
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP-E 480
R G Y + E TA ++ L+P T Y +++ A N+ G+
Sbjct: 1426 RELPRGQWQTYSSSISHEATA-----------CVVERLRPFTSYKLRLKATNDIGDSDFS 1474
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
+E T + P +PP +V + ++V + W+ + GY++ E++ +
Sbjct: 1475 AETEAVTTLQDVPGEPPRSVSVTPRTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEA 1534
Query: 541 SRANDT-IIPVGNTLDADIVDLSPGK--------------------RYHMRVLAFSNGGD 579
+ A ++ + + L A++ S K RY + + A++ G+
Sbjct: 1535 APATESKTLKTPSALRAELTAQSSFKTVNSSSTETTYELTHLKKYRRYEVVLTAYNVIGE 1594
Query: 580 GRMSSPAITF 589
G S+P F
Sbjct: 1595 GPASAPVEVF 1604
>gi|332811712|ref|XP_003308755.1| PREDICTED: neurofascin isoform 1 [Pan troglodytes]
Length = 1341
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 554 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 611
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 612 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 670
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 671 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 721
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 722 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 775
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 776 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 833
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 834 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 886
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 887 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 945
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G +IG+ +KY
Sbjct: 946 EWD----HPEHPNGIMIGYTLKY 964
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 453 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 510
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 511 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 561
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 562 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 616
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 617 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 666
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 667 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 719
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 720 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---E 769
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 770 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 826
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 827 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 878
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 879 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 937
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 938 PNLETINLEWDH--PEHPNGIMIGYTLK 963
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 363 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 421 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 477
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 478 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 533
Query: 182 L 182
+
Sbjct: 534 M 534
>gi|332024824|gb|EGI65012.1| Down syndrome cell adhesion molecule-like protein [Acromyrmex
echinatior]
Length = 1968
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 173/613 (28%), Positives = 257/613 (41%), Gaps = 51/613 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGR-RKIFENGNLLISPVSRDDSG 56
G V+I C E P P WK+ D +G G + NG+L+I VSRD +G
Sbjct: 698 GHGVSIACQAEGFPIPTVTWKQSIGETPGDYRELGYGTEGAGVARNGSLVIPRVSRDHAG 757
Query: 57 IYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
Y C A+N G SK RL V GP + + ++ ++ LRC A + LD++
Sbjct: 758 FYLCQASNGIGPGLSKLIRLTVHAGPQVTVRTRQE-SVRRGESVILRCEAEGDAPLDLS- 815
Query: 116 IWTHNGVRIG-NMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTK 171
W +I N D+ + G + L I AS D G+Y CV + G+
Sbjct: 816 -WRVRDSKIDPNYDVRYAVDNTADASGRVTTELRIIQASHMDRGDYVCVAANAYGRDKAM 874
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN------GRPITHYKIIARTNWNSTW 225
++V+ PP P + V E S + W+ AT+ PIT+Y I+ W
Sbjct: 875 IHLLVQEPPDFPRNLHVAEQGSRSILLAWSSPATDRDASHVSSPITNY-IVQYKEAQDVW 933
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
EH K V G + + L P +TY F+V+A N LG PS T +
Sbjct: 934 H---EHNTQKLV---AGDNTVARVSPLKPATTYHFRVLAENHLGTSAPSDIL-HVQTDGE 986
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE--Y 343
P P + L I+W+P R N + Y I + + + T +
Sbjct: 987 VPGGPPRHVSVEPLGPQQLKITWQPPDRSLWNGELLGYTIGYTNLGGDDQLTNTTRVGIT 1046
Query: 344 GN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
GN G R+ YT+Y + V+A N G GP S+ VT + ED+P PQ V
Sbjct: 1047 GNGDGSHDYRLTGLRKYTQYSIVVKAFNSKGDGPGSDPVTAHTFEDVPSAPPQNVACAAL 1106
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE---ETAVYYLSRTTRNWALIVGL 459
N I VTW P + + G ++G+++ Y + + ET V + T ++ L
Sbjct: 1107 NGQNIQVTWKPPP--SDKVHGVVLGYKLLYEAASDSQTSRETKVSHALST-----VLHSL 1159
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P T Y V+V+AY AG+G S T P P +K + V ++ P
Sbjct: 1160 SPYTNYTVQVLAYTRAGDGVASSPVSCTTGETVPDAPE---RVKAVVSGENAVVISWLPP 1216
Query: 520 SFEEEPIIGYKV--RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
+I Y V RV E Q++ + +I+P N L ++ L + Y V A +
Sbjct: 1217 RRPNGLLIQYTVYIRVLEQGQEV-KITKSILPAQN-LHHEVTGLKQHETYEAWVTASTKV 1274
Query: 578 GDGRMSSPAITFQ 590
G G S+P I Q
Sbjct: 1275 GQGS-STPVIKLQ 1286
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
A G + I C P VW+K G+I R+ NG L I V R D G Y+C
Sbjct: 505 AVAGKQLYIKCPVAGYPIESIVWEK-GDIKLPTNMRQRVANGTLFIDTVQRSADEGTYTC 563
Query: 61 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKIT-IAAHRNL------QLRCSAHTEEL 110
TA N H + R++V PPKIT + R+L ++C T +
Sbjct: 564 TARNKHNFTSHRSVEVRVLV----------PPKITPFSFARDLNVGDRTSVQCVVVTGD- 612
Query: 111 LDVAYIWTHNGVRIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
L + + W + V I + N ++ + +L I + S + +G Y C + + G
Sbjct: 613 LPLTFTWLKDNVPIETVRTLPNGIQISDYPPFSSILTINSVSASHSGNYTCQISNVAGLA 672
Query: 169 STKTTVIVEGPP 180
T++ V PP
Sbjct: 673 EHSTSLSVAVPP 684
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + + C P+ W KDG + +G R + + + ++ V+R+D G+Y C N
Sbjct: 320 GKSAYLTCTASGFPQAALYWLKDGQPLRTGARVRTVSSERISVTSVAREDRGMYQCFVRN 379
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ M + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 380 EYEMAQGIAELRL-------GEIAPQLVYRFIEQTMQPGPSVSLKCSAAGNPTPQIS--W 430
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ IT D GEYEC+ S G +
Sbjct: 431 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNITTVKPEDGGEYECIASSRAGDARHSARL 489
Query: 175 IVEGPP 180
+ G P
Sbjct: 490 NIYGLP 495
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 17/162 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNI----IGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
V I C A P P W + N I + +G+L+I V D+G Y CTA+
Sbjct: 229 VVIPCVAYANPTPTNRWYYNRNQREEPIEESSGHYVVRDGSLIIQSVEESDAGSYMCTAS 288
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG-- 121
N G + + RL V S + Q P T+ ++ L C+A A W +G
Sbjct: 289 NSEGSETLEIRLTVSAPLSVHVQ-PAIQTVDLGKSAYLTCTA--SGFPQAALYWLKDGQP 345
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+R G + T + + +T+ + D G Y+C V++
Sbjct: 346 LRTG----ARVRT----VSSERISVTSVAREDRGMYQCFVRN 379
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 31/249 (12%)
Query: 391 QVAPQG--VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKE---DNPEETAV 443
QV P + + G + AI + W + I+G L+ +R ++ W+E D E T
Sbjct: 1378 QVPPTSPTLLATGTTTDAIQLQWKQGDNGGAPIKGFLLAYRREFAEWEEVMLDRRESTH- 1436
Query: 444 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 503
L+ GLQ T+Y + A+N G G S+ +T P PP ++
Sbjct: 1437 -----------LLEGLQCGTRYQFTLAAFNRIGSGSASDIQTAKTNGSKPVPPPKHHFVR 1485
Query: 504 GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSP 563
P V + P+ + V + D ++ + P IVDL
Sbjct: 1486 ---PNQTFVILELAAWQDGGCPLTYFVVEYRRLPGDWLLVSNNVPPQSK---FPIVDLES 1539
Query: 564 GKRYHMRVLAFSNGGDGRMSSPAITF------QMGEEKEFKSGSPALYSASTTLLLVMSS 617
G Y +RV A++N G + T ++ E+ +S + LY + L + S
Sbjct: 1540 GTSYELRVTAYNNAGSTQAEYLFSTLSSNGNNRLHEDHPQESENTPLYLDAHVLAPSVIS 1599
Query: 618 TLYIFVAFS 626
L + +A +
Sbjct: 1600 VLAVMLAIA 1608
>gi|147901606|ref|NP_001081987.1| protein tyrosine phosphatase, receptor type, F precursor [Xenopus
laevis]
gi|7248659|gb|AAF43606.1|AF197945_1 receptor protein tyrosine phosphatase LAR [Xenopus laevis]
Length = 1788
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 255/598 (42%), Gaps = 58/598 (9%)
Query: 9 TIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
T+ C P P+ W KD + S GR K +G L I D G Y C ATN
Sbjct: 150 TMLCAASGNPDPEITWFKDFLPVDTASSNGRIKQLRSGALQIENSEESDQGKYECVATNS 209
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITI--AAHR-----NLQLRCSAHTEELLDVAYIWT 118
G S + + ++ P+ +I + H ++ L C A + V ++
Sbjct: 210 AGTRYSAPANLYVR----VRRVAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWM-- 263
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G +L + + + +G LE+TN D+ Y CV S++G I + V+
Sbjct: 264 -----AGLEELTKEDEMPVGRNG--LELTN--IKDSANYTCVAISSLGMIEAVAQITVKA 314
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
P P V E TS T+ W G N P+++Y I + + + F + V G
Sbjct: 315 LPKPPLDAMVTETTATSVTLTWDSG--NPDPVSYYVIQYKPKASESSF---QEVDGVATT 369
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
RY SI L P+S YEF++IA N +G G PS + T P P ++
Sbjct: 370 RY------SIGG-LSPFSEYEFRIIAVNNIGRGPPSE-VIEAQTGEQAPSSPPLKVQARM 421
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ + W+ LP E+ N +++++ D +++ V + I S
Sbjct: 422 LSASTMLVQWD-LP-EEPNGQIRGFRVYY--TTDPHLPFSMWQKHNVVDNHLTTIGSLTT 477
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW--NPIEL 416
T Y ++V A VG GP SE++ + + + +P P + T I +TW P E
Sbjct: 478 GTTYSIRVLAFTSVGDGPPSEIIQVKTQQGVP-AQPVDFQAEAETDTRILLTWLLPPQE- 535
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
R+ + + YW+ N E+ + + ++ + GL+PDT Y+ ++ A+++ G
Sbjct: 536 -------RITKYELLYWEGTNGEQHKLLFHPASS---YAVEGLKPDTLYHFRLAAWSDTG 585
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
G + T + P PP V + +N T+V VTW+ P+ + I GY+V +
Sbjct: 586 VGVYTPAIQATTAQSMPSAPPRKVEVDSVNSTSVRVTWKSPLPTKQNGQIRGYQVTYVRL 645
Query: 537 DQDMSRANDTI--IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ R N I + + DA I LSP Y + V A++ GDG S P + G
Sbjct: 646 EGGEPRGNPIIKDVMLSEAQDAVITGLSPETTYSITVAAYTTKGDGARSKPKVVSTTG 703
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 148/610 (24%), Positives = 245/610 (40%), Gaps = 87/610 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGN---LLISPVS-RDDSGIYS 59
GG + C A PKP+ W K G + S I F++G+ L I P+ D IY
Sbjct: 44 GGVASFVCQATADPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYE 103
Query: 60 CTATNVHGMDESKGRLIVL------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
CTATN G S +L VL HG + P + R + C+A D
Sbjct: 104 CTATNSVGEINSSAKLTVLEEEQLPHGFPVIDMGPQLKVVEKTRTATMLCAASGNP--DP 161
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKT 172
W + + + N + G L+I N+ +D G+YECV ++ G + S
Sbjct: 162 EITWFKDFLPVDTASSNGRIK---QLRSGALQIENSEESDQGKYECVATNSAGTRYSAPA 218
Query: 173 TVIVEG---------PPG----LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 219
+ V PP +PGG V+ T + G P+ + K
Sbjct: 219 NLYVRVRRVAPRFSIPPSNHEVMPGG----SVNLTCVAV--------GAPMPYVK----- 261
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
W E + KE + GR + N+ + + +A + LG E +
Sbjct: 262 -----WMAGLEE-LTKEDEMPVGRNGLELTNIK---DSANYTCVAISSLGMIEAVAQITV 312
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSE 338
P KP P ++++W+ P YY I ++ K +++ FQ
Sbjct: 313 KALP--KP---PLDAMVTETTATSVTLTWD----SGNPDPVSYYVIQYKPKASESSFQ-- 361
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
E V I ++EYE ++ A+N++G GP SEV+ + E P P V
Sbjct: 362 ---EVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQ 418
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG 458
+R +++ + V W+ + E G++ G R+ Y+ D +++ N +G
Sbjct: 419 ARMLSASTMLVQWD----LPEEPNGQIRGFRV-YYTTDPHLPFSMWQKHNVVDNHLTTIG 473
Query: 459 -LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYV 517
L T Y ++V+A+ + G+GP SE +T + P +P V + T + ++
Sbjct: 474 SLTTGTTYSIRVLAFTSVGDGPPSEIIQVKTQQGVPAQP---VDFQAEAETDTRILLTWL 530
Query: 518 SPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P +E I Y++ WE + + P + + L P YH R+ A+S+
Sbjct: 531 LPP--QERITKYELLYWE-GTNGEQHKLLFHPASSYA---VEGLKPDTLYHFRLAAWSDT 584
Query: 578 GDGRMSSPAI 587
G G + +PAI
Sbjct: 585 GVG-VYTPAI 593
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 213/545 (39%), Gaps = 49/545 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+V + C AP P W + + NG L + DS Y+C A +
Sbjct: 243 GGSVNLTCVAVGAPMPYVKWMAGLEELTKEDEMPVGRNGLEL---TNIKDSANYTCVAIS 299
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
GM E+ ++ V P L +T ++ L + + V+Y +
Sbjct: 300 SLGMIEAVAQITVKALPK--PPLDAMVTETTATSVTLTWDSGNPD--PVSYYVIQYKPKA 355
Query: 125 GNMDLNELE---TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE---- 177
E++ T +I GGL + F++ E+ + + +G+ + +
Sbjct: 356 SESSFQEVDGVATTRYSI-GGL-----SPFSEY-EFRIIAVNNIGRGPPSEVIEAQTGEQ 408
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P VQ + ++ +QW I +++ T+ + + +H + V
Sbjct: 409 APSSPPLKVQARMLSASTMLVQWDLPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNV---V 465
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
D + + L +TY +V+A +G G PS Q T P Q P
Sbjct: 466 DNH-----LTTIGSLTTGTTYSIRVLAFTSVGDGPPSEII-QVKTQQGVPAQ-PVDFQAE 518
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
+ ++W P+E+ Y ++W N + + L + AV + +
Sbjct: 519 AETDTRILLTWLLPPQERITK---YELLYWEGTNGEQHK---LLFHPASSYAVEGLKPD- 571
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
T Y ++ A +D G G + + +A+ MP P+ V NST++ VTW
Sbjct: 572 --TLYHFRLAAWSDTGVGVYTPAIQATTAQSMPSAPPRKVEVDSVNSTSVRVTWKSPLPT 629
Query: 418 RENIRGRLIGHRIKYWKEDNPEETA---VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
++N G++ G+++ Y + + E + + + A+I GL P+T Y + V AY
Sbjct: 630 KQN--GQIRGYQVTYVRLEGGEPRGNPIIKDVMLSEAQDAVITGLSPETTYSITVAAYTT 687
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G+G S+ + T P KP + N +H W P ++GY+++
Sbjct: 688 KGDGARSKPKVVSTTGAVPGKPTMMISTTVQNTAMIH--WH--PPREIVGELLGYRLQYK 743
Query: 535 EVDQD 539
VD+D
Sbjct: 744 RVDED 748
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
Y K+ A N G G E E I + E++P PQ + G ++ V+W P L N
Sbjct: 773 YIFKLSAKNRAGAGEEYEK-EISTPEEVPSGFPQNLQVVGLTTSTTEVSWEPPVLSERN- 830
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRN-WALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G++ + + Y ++ ++ L+ TR+ + +V L+PDT Y +KV A + G GP
Sbjct: 831 -GKITNYTVVYRDINSQQD-----LTNITRDTYITLVNLKPDTTYDIKVRARTSKGAGPL 884
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
S RT Q + + T+V ++W
Sbjct: 885 SPSIQSRTM-PVDQVFAKNFRVNAVMKTSVLLSW 917
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 133/364 (36%), Gaps = 69/364 (18%)
Query: 256 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315
++Y FK+ A N G GE + +TP + P P + G +SWEP +
Sbjct: 771 ASYIFKLSAKNRAGAGEEYEK--EISTPEEVPSGFPQNLQVVGLTTSTTEVSWEPPVLSE 828
Query: 316 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 375
+N Y + +R D Q + + I +V + + T Y++KV+A G G
Sbjct: 829 RNGKITNYTVVYR---DINSQQDLTNITRDTYITLVNLKPD---TTYDIKVRARTSKGAG 882
Query: 376 PESEVVTIFSAEDMP--QVAPQGVFSRGFNSTAINVTWN---------PIELIRENIRGR 424
P S + + MP QV + T++ ++W P ++ N
Sbjct: 883 PLSPSI---QSRTMPVDQVFAKNFRVNAVMKTSVLLSWELPDSYKSAVPFKIFYNNQNVE 939
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
+ GH ++ LI L+PDT Y +M ++ G +
Sbjct: 940 VDGHSMR----------------------KLISNLKPDTDYSFVLMNRGSSAGGLQHRVS 977
Query: 485 LERTYRKAPQKPPSA----------VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
+ KP SA + + + TT V W Y+ + G R W
Sbjct: 978 IRTAPDVLKSKPSSANKYMEEGRFTLQLPQVQ-TTATVRWYYIVVVTLDSSSRGMNSR-W 1035
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA-FSNGGDGRMSSPAITFQMGE 593
+ ++M L+ + ++ G R H R + R+++ +F +G+
Sbjct: 1036 QSPEEME------------LEQILEAINQGTRRHRRQTSKIKPYIAARVNTLPESFTLGD 1083
Query: 594 EKEF 597
KE+
Sbjct: 1084 NKEY 1087
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGR--PITHYKIIARTNWNSTWFNVSEHVIG 234
E P G P +QVV + ++ + W + R IT+Y ++ R N + +
Sbjct: 798 EVPSGFPQNLQVVGLTTSTTEVSWEPPVLSERNGKITNYTVVYRD------INSQQDLTN 851
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT-PADKPYQAPSR 293
D Y ++ N L P +TY+ KV A G G P SPS Q T P D+ + R
Sbjct: 852 ITRDTYI-----TLVN-LKPDTTYDIKVRARTSKGAG-PLSPSIQSRTMPVDQVFAKNFR 904
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
+ + +SWE LP ++A + +KIF+ +N
Sbjct: 905 VNAVMKT--SVLLSWE-LPDSYKSA--VPFKIFYNNQN 937
>gi|297483858|ref|XP_002693951.1| PREDICTED: neurofascin isoform 1 [Bos taurus]
gi|296479433|tpg|DAA21548.1| TPA: neurofascin homolog (chicken) isoform 1 [Bos taurus]
Length = 1236
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 451 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 508
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L +A W + + I N
Sbjct: 509 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISN 567
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 568 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 618
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 619 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 672
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 673 -VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 730
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 731 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 783
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 784 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 842
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 843 EWD----HPEHPNGILIGYTLKY 861
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 205/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 350 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 407
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 408 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 458
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 459 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 513
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQW-------------TDGATNGRPITHYKIIART 219
+ V+ P + + +V K T+Q + P+ + +
Sbjct: 514 RLEVKDPTRI-YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKE 572
Query: 220 NWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
+ T F V+E V E+D+ + + VL +T ++ A L G
Sbjct: 573 EDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPKGR 626
Query: 273 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 332
P P T + + S+ +P + N+P Y + + +
Sbjct: 627 PDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYVVQFE---E 666
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 667 DQFQPGVWHDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 723
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 724 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 775
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 776 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQ 834
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 835 PNLETINLEWDH--PEHPNGILIGYTLK 860
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 260 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 317
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 318 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 374
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 375 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 430
Query: 182 L 182
+
Sbjct: 431 M 431
>gi|426333438|ref|XP_004028284.1| PREDICTED: neurofascin isoform 1 [Gorilla gorilla gorilla]
Length = 1341
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 554 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 611
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 612 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 670
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 671 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 721
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 722 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 775
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 776 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 833
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 834 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 886
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 887 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 945
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G +IG+ +KY
Sbjct: 946 EWD----HPEHPNGIMIGYTLKY 964
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 453 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 510
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 511 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 561
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 562 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 616
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 617 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 666
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 667 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 719
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 720 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---E 769
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 770 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 826
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 827 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 878
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 879 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 937
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 938 PNLETINLEWDH--PEHPNGIMIGYTLK 963
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 363 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 421 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 477
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 478 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 533
Query: 182 L 182
+
Sbjct: 534 M 534
>gi|357620470|gb|EHJ72649.1| hypothetical protein KGM_17913 [Danaus plexippus]
Length = 1389
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 153/602 (25%), Positives = 252/602 (41%), Gaps = 58/602 (9%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIGS--------GGRRKIFENGNLLISPVSRDDSGIYSCT 61
+ C+ P+P+ W K ++G+ GG NG+L+I VS D G+YSC
Sbjct: 351 VSCSASGYPQPQVHWMKKDALLGTWQPVLELAGGGILSLPNGSLVIEEVSLTDEGLYSCN 410
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G SK + ++ P +++ +T + L C A ++ + + W HNG
Sbjct: 411 VENGVGTPLSKTVWMTVNKPVHFDTSSANVTSRLGHAVSLECRALGDDPIRIT--WNHNG 468
Query: 122 VRIGNMDLNELETPNINIDGGL-----LEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
N+D + L + I + ADAG Y+C + G S T + +
Sbjct: 469 ---NNIDFQSHRAKHSETKTSLGVTSTINIQYSETADAGFYQCRASNPYGSASFNTFLTI 525
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART--NWNSTW-FNVSEHVI 233
PP P ++V V +A++ W DGA Y + T ++ W + VS ++
Sbjct: 526 LEPPTSPSELRVETVRSRTASVSWRDGAH-----AEYYTLQHTPAHYADDWEYAVSLNIT 580
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
K D R+ ++N+ P + Y +V GNE+G ++P + T + P P
Sbjct: 581 RKGNDI---RQTIELQNIR-PATAYAVRVATGNEVGVSRFTTPV-HFTTHEEAPSSTPIN 635
Query: 294 IG-GGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
I G+L +SW P P++ N + K ++ + T+ + TLK G
Sbjct: 636 IQIEQTENPGELFVSWLPPPKDTHNGIITGYHVKAVPQQGSPTDTDTRTLKVSKLSGKQE 695
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
I T Y V + A N G GP S V + E P++AP V +S+++ V
Sbjct: 696 TVISGLLKNTRYAVSISAFNSAGSGPFSIPVFQDTMEGAPEIAPSSVECTAVSSSSLRVG 755
Query: 411 WNPIELIRENIRGRLIGHRIKY------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
W PI + + LIG+ I Y W+ T +Y + GL +
Sbjct: 756 WQPIAIHEQG--SSLIGYSILYGTEESSWQNQTSLHTEIY-----------LQGLSKYSN 802
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y +KV ++N G GP S + T + P PPS + + ++ T++ V+W+ P
Sbjct: 803 YTIKVAGFSNYGAGPFSFPIVCTTLQDVPD-PPSDIKVLILSSTSLLVSWK--KPEHANG 859
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
++ Y V V + P T ADI +L+ G+ Y + V + G+G S
Sbjct: 860 ELLYYTVYVKPTSGTGPPLTSRVDPSRTT--ADIKELTSGRSYEVWVTGSTAAGEGAPSR 917
Query: 585 PA 586
A
Sbjct: 918 RA 919
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 149/635 (23%), Positives = 250/635 (39%), Gaps = 61/635 (9%)
Query: 4 EGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGN-----LLISPVSRDDSGI 57
EG V I+CN + P F W KDG I S K+ E + L+I V+ + G
Sbjct: 251 EGQIVNIYCNVRSGDLPIHFEWLKDGKRISSN--LKVIERSSELFSALVIKKVALEHCGT 308
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y+C A+N L + P + E+ P ++ R + CSA V W
Sbjct: 309 YTCVASNHVAKVNKSTELYIKVAPKWLEE-PSNSSLLLGRKGIVSCSASGYPQPQVH--W 365
Query: 118 THNGVRIGNMD-LNELETPNI-NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+G + EL I ++ G L I S D G Y C V++ VG +KT +
Sbjct: 366 MKKDALLGTWQPVLELAGGGILSLPNGSLVIEEVSLTDEGLYSCNVENGVGTPLSKTVWM 425
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P + + A PI R WN G
Sbjct: 426 TVNKPVHFDTSSANVTSRLGHAVSLECRALGDDPI-------RITWNHN---------GN 469
Query: 236 EVDRYTGR-KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP----QYNTPAD--KPY 288
+D + R K + + L ST + + G+ + + +P +NT +P
Sbjct: 470 NIDFQSHRAKHSETKTSLGVTSTINIQYSETADAGFYQCRASNPYGSASFNTFLTILEPP 529
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREK----QNAPNIYYKIFWRKKNDTEFQ-SETLKEY 343
+PS + + S+SW + Q+ P Y +D E+ S +
Sbjct: 530 TSPSELRVETVRSRTASVSWRDGAHAEYYTLQHTPAHY-------ADDWEYAVSLNITRK 582
Query: 344 GNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGV-FSRGF 402
GN + + + T Y V+V N+VG + V + E+ P P + +
Sbjct: 583 GNDIRQTIELQNIRPATAYAVRVATGNEVGVSRFTTPVHFTTHEEAPSSTPINIQIEQTE 642
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKYW-KEDNPEETAVYYLSRTT---RNWALIVG 458
N + V+W P ++ G + G+ +K ++ +P +T L + + +I G
Sbjct: 643 NPGELFVSWLPPP--KDTHNGIITGYHVKAVPQQGSPTDTDTRTLKVSKLSGKQETVISG 700
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L +T+Y V + A+N+AG GP S + T AP+ PS+V ++ +++ V W+ ++
Sbjct: 701 LLKNTRYAVSISAFNSAGSGPFSIPVFQDTMEGAPEIAPSSVECTAVSSSSLRVGWQPIA 760
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ +IGY + ++ S N T + L LS Y ++V FSN G
Sbjct: 761 IHEQGSSLIGYSILYG--TEESSWQNQTSLHTEIYLQG----LSKYSNYTIKVAGFSNYG 814
Query: 579 DGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLL 613
G S P + + + + S L +ST+LL+
Sbjct: 815 AGPFSFPIVCTTLQDVPDPPSDIKVLILSSTSLLV 849
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-------GRRKIFEN---GNLLISPVSRDD 54
GG++++ C P+FVW++DG + S G+ +N L I+ V +D
Sbjct: 43 GGDISMQCAATGDRPPQFVWERDGVAVSSNTDPRYALGQIMTADNSVIAQLNITRVRVED 102
Query: 55 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
G+Y+C A S+ RL V +GP Y LPP I + ++ LRC + + +
Sbjct: 103 GGLYACIAKEGEHSASSENRLDV-YGPPYIRSLPP-IKAQSGESINLRCPFYGYPISKID 160
Query: 115 YIWTHNGVRIGNMDLNEL------ETPN----------INIDGGLLEITNASFADAGE-Y 157
W H G ++LN L T N +NI G+L I + D G Y
Sbjct: 161 --WEHKG---KTVNLNSLFQSRYKRTQNHQKRKSRRSIVNIH-GVLTIPEVNKEDNGAVY 214
Query: 158 ECVVKSTVGKISTKT--TVIVEGP 179
C+V S G+++ ++ ++E P
Sbjct: 215 TCIVTSPSGEMARRSFEIQVIEAP 238
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G G ++ + C P P+ VW NII R + +LLI+ + + SG Y+C A
Sbjct: 941 GVGSSLLLVCQCIGVPPPRTVWYHKHNIITHHPRFTRNHDDSLLINNIDQSLSGNYTCLA 1000
Query: 63 TNVHGMDESKGRLIVLHGP 81
N++G D + ++VL P
Sbjct: 1001 KNLYGSDSVEYTVVVLPLP 1019
>gi|358415963|ref|XP_590378.6| PREDICTED: neurofascin [Bos taurus]
Length = 1215
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 430 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 487
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L +A W + + I N
Sbjct: 488 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISN 546
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 547 RMKKEEDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 597
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 598 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 651
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 652 -VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 709
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 710 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 762
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 763 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 821
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 822 EWD----HPEHPNGILIGYTLKY 840
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 205/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 329 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 386
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 387 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 437
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 438 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 492
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQW-------------TDGATNGRPITHYKIIART 219
+ V+ P + + +V K T+Q + P+ + +
Sbjct: 493 RLEVKDPTRI-YRMPEDQVAKRGTTVQLECRVKHDPSLKLAVSWLKDDEPLYISNRMKKE 551
Query: 220 NWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
+ T F V+E V E+D+ + + VL +T ++ A L G
Sbjct: 552 EDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPKGR 605
Query: 273 PSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND 332
P P T + + S+ +P + N+P Y + + +
Sbjct: 606 PDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYVVQFE---E 645
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 646 DQFQPGVWHDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 702
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 703 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 754
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 755 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQ 813
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 814 PNLETINLEWDH--PEHPNGILIGYTLK 839
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 239 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 296
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 297 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 353
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 354 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 409
Query: 182 L 182
+
Sbjct: 410 M 410
>gi|297662214|ref|XP_002809609.1| PREDICTED: neurofascin [Pongo abelii]
Length = 1342
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 554 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 611
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 612 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 670
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 671 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 721
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 722 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 775
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 776 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 833
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 834 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 886
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 887 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 945
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G +IG+ +KY
Sbjct: 946 EWD----HPEHPNGIMIGYTLKY 964
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 453 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 510
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 511 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 561
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 562 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 616
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 617 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 666
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 667 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 719
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 720 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---E 769
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 770 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 826
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 827 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 878
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 879 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 937
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 938 PNLETINLEWDH--PEHPNGIMIGYTLK 963
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 363 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 420
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 421 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 477
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 478 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 533
Query: 182 L 182
+
Sbjct: 534 M 534
>gi|397504880|ref|XP_003823008.1| PREDICTED: neurofascin [Pan paniscus]
Length = 1388
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 601 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 658
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 659 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 717
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 718 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 768
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 769 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 822
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 823 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 880
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 881 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 933
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 934 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 992
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G +IG+ +KY
Sbjct: 993 EWD----HPEHPNGIMIGYTLKY 1011
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 121/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 500 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 557
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 558 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 608
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 609 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 663
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 664 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 713
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 714 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 766
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 767 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDANNSPITDYVVQFE---E 816
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 817 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 873
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 874 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 925
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 926 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 984
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 985 PNLETINLEWDH--PEHPNGIMIGYTLK 1010
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 410 GMDLLLECIASGVPTPDIAWYKKGGDLPSD--KAKFENFNKALRITNVSEEDSGEYFCLA 467
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 468 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 524
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 525 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 580
Query: 182 L 182
+
Sbjct: 581 M 581
>gi|71998006|ref|NP_001023496.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
gi|18140037|gb|AAL60232.1|AF456361_1 immunoglobulin domain-containing protein Y54G2A.25 [Caenorhabditis
elegans]
gi|148283960|gb|ABQ57413.1| LAD-2 long isoform [Caenorhabditis elegans]
gi|351051345|emb|CCD83513.1| Protein LAD-2, isoform a [Caenorhabditis elegans]
Length = 1187
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 228/524 (43%), Gaps = 43/524 (8%)
Query: 8 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C+ +AAP+ W D + G+ K+F N ++ V+ D G+Y C +N
Sbjct: 444 VVLDCDVDAAPEAMVRWVDADDRPLQVVEGKNKLFPNHTFMVYDVNSADEGLYYCNVSNK 503
Query: 66 HGMDESKGRLIVLHGPSYYEQLP--PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
+G++ + RL V P+Y+ ++P ++ + A ++ C A + L + Y WT NG
Sbjct: 504 YGINRATNRLQVF-KPTYFVRIPTPKRLILEAGETAEVFCEAVADPRLPIRYQWTINGKV 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ E+ I L + +G +C + V +IV+ P P
Sbjct: 563 LT-------ESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVDVKLASMQLIVKDVPAHP 615
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+ + AT++W + +G I Y + T++ + V I +EV+ +
Sbjct: 616 V-VETAHCSERKATVKWVAASDHGDSIKKYIVEMFTDFKKNEWEV----INEEVN--VNK 668
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGY------GEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ ++ L PW Y F+V+A N G G+P T PY P+ + G
Sbjct: 669 ETFEVDITLTPWVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKGE 728
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
G + +L ISW+PL R NAPN+ Y + ++ +E L E ++R F
Sbjct: 729 GTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFLVEDSLANFTIIRDQPTF 788
Query: 358 YYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIE 415
+Y ++VQ++N VGP E E+ +S ED+P AP+ N T IN TWNP++
Sbjct: 789 --RKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFHIDTQINFTTINFTWNPVD 846
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN--WALIVGLQPDTKYYVKVMAYN 473
+ G +G+ I+YWK +N T Y + N + +I T Y + N
Sbjct: 847 A--NTVNGHFVGYEIEYWKAEN---TIRKYSIKIPANSTYKVINSFHAVTNYSAHIRTRN 901
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVH---IKGINPTTVHVTW 514
S+ Y+ P+ PP VH + + T + + W
Sbjct: 902 KRLRSAPSD-YVSFA---MPEGPPGKVHNLRVYSVGSTAILLQW 941
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 20/268 (7%)
Query: 359 YTEYEVKVQAINDVGPG-------PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y +V A+N G P+ + +T + P P GV G + ++W
Sbjct: 680 WVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKGEGTEPDNLVISW 739
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVM 470
P++ N + + ++Y K D P +L + I+ QP KY ++V
Sbjct: 740 KPLDRYYWNAPN--MQYLVRY-KLDEPIHGWTEFLVEDSLANFTIIRDQPTFRKYLIQVQ 796
Query: 471 AYNNAGEG-PESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIG 528
+ N+ G E E + + P + P HI IN TT++ TW V + +G
Sbjct: 797 SVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFHIDTQINFTTINFTWNPVDANTVNGHFVG 856
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY--HMRVLAFSNGGDGRMSSPA 586
Y++ W+ + + R IP +T I Y H+R N S
Sbjct: 857 YEIEYWKAENTI-RKYSIKIPANSTYKV-INSFHAVTNYSAHIRT---RNKRLRSAPSDY 911
Query: 587 ITFQMGEEKEFKSGSPALYSASTTLLLV 614
++F M E K + +YS +T +L+
Sbjct: 912 VSFAMPEGPPGKVHNLRVYSVGSTAILL 939
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 41/226 (18%)
Query: 304 LSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY--- 359
++ +W P+ N + Y+I +W+ +N T+++Y ++IP+ Y
Sbjct: 838 INFTWNPVDANTVNGHFVGYEIEYWKAEN-------TIRKYS------IKIPANSTYKVI 884
Query: 360 ------TEYEVKVQAINDVGPGPESEVVTIFSAEDMP-QVAPQGVFSRGFNSTAINVTWN 412
T Y ++ N S+ V+ E P +V V+S G STAI + W+
Sbjct: 885 NSFHAVTNYSAHIRTRNKRLRSAPSDYVSFAMPEGPPGKVHNLRVYSVG--STAILLQWD 942
Query: 413 -PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P++ GR+ G+ I + E N ET Y+ +++ L +PDT Y V V A
Sbjct: 943 APLQ-----PNGRIRGYFISFQNEKN--ETEETYVIHRQKHY-LHEKSEPDTGYKVSVWA 994
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWR 515
AGEGP + R + R P + P A +K I+ + V W+
Sbjct: 995 ETRAGEGPVTLRPV----RTWPARIPDAPIFRVKNISLDSFVVEWQ 1036
>gi|45384050|ref|NP_990484.1| neuronal-glial cell adhesion molecule precursor [Gallus gallus]
gi|1171701|sp|Q03696.2|NGCA_CHICK RecName: Full=Neuronal-glial cell adhesion molecule; Short=Ng-CAM;
Flags: Precursor
gi|509767|emb|CAA40290.1| Ng-CAM (neuron-glia cell adhesion melecule) [Gallus gallus]
Length = 1266
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 154/607 (25%), Positives = 247/607 (40%), Gaps = 84/607 (13%)
Query: 7 NVTIF--CNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
N T+F C AP P W R +F NG+L +S V D G+Y+C A
Sbjct: 434 NQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRVSAVRGGDGGVYTCMAQ 493
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGV 122
N H + S L+ + P+ P T + C A + + + W G
Sbjct: 494 NAHS-NGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQ 552
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPG 181
+ + P ++ + ++N + D G +C + + + + V G PP
Sbjct: 553 PLPD-------DPRYSV-AAEMTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPPS 604
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
+QV+EV + + WT G + PI F V E +++ R
Sbjct: 605 R--DLQVMEVDEHRVRLSWTPGDDHNSPIEK-------------FVVEEEEEREDLQRGF 649
Query: 242 GRKEASIEN-----VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
G + + L P+ + F+V+A N G GE +PS TP P + P + G
Sbjct: 650 GAADVPGQPWTPPLPLSPYGRFPFRVVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHG 709
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRI 353
G + G+L I+WEPLP + NAP Y++ WR + + V V +
Sbjct: 710 EGNETGNLVITWEPLPPQAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVV 769
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN- 412
++ ++++VQA+N G GPE+ S ED+P V P+ V NS+ + V W
Sbjct: 770 GGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWTL 829
Query: 413 ---PIELIRENIRGRLIGHRIKYWK------------------------EDNPEETAVYY 445
P EL RGRL G R+ YW+ ED P V
Sbjct: 830 GGGPKEL-----RGRLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVAL 884
Query: 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 505
AL+ GL+P ++Y ++V+ +N G+GP SE T P PP + ++ +
Sbjct: 885 TVGGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEGVP-GPPEELRVERL 943
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL---DADIVDLS 562
+ T + V R +F+ I GY +R +V+ + +P G+ L D+ L+
Sbjct: 944 DDTALSVVERR---TFKRS-ITGYVLRYQQVEP------GSALPGGSVLRDPQCDLRGLN 993
Query: 563 PGKRYHM 569
RY +
Sbjct: 994 ARSRYRL 1000
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 47/272 (17%)
Query: 359 YTEYEVKVQAINDVGPG----PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
Y + +V A+N G G P + + T +A P+ P GV G + + +TW P+
Sbjct: 668 YGRFPFRVVAVNAYGRGEHHAPSAPIETPPAA---PERNPGGVHGEGNETGNLVITWEPL 724
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---------LIVGLQPDTKY 465
N +R+++ P E WA ++ GL P + +
Sbjct: 725 PPQAWN--APWARYRVQW----RPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPF 778
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS-PSFEEE 524
++V A N AG+GPE+ + + P P V ++ +N +TV V W P
Sbjct: 779 QIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWTLGGGPKELRG 838
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPV-----------------------GNTLDADIVDL 561
+ G++V W + R+ P G+ A + L
Sbjct: 839 RLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVALTVGGDARGALLGGL 898
Query: 562 SPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
P RY +RVL F+ GDG S P I F+ E
Sbjct: 899 RPWSRYQLRVLVFNGRGDGPPSEP-IAFETPE 929
>gi|237858675|ref|NP_001005388.2| neurofascin isoform 1 precursor [Homo sapiens]
gi|115527434|gb|AAI17675.2| NFASC protein [Homo sapiens]
gi|219520716|gb|AAI44455.1| Unknown (protein for MGC:177997) [Homo sapiens]
Length = 1240
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G +IG+ +KY
Sbjct: 844 EWD----HPEHPNGIMIGYTLKY 862
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 121/570 (21%), Positives = 206/570 (36%), Gaps = 99/570 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 515 RLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSW---LKDDEPLYIGNRMK 571
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPK 625
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 626 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDANNSPITDYVVQFE-- 666
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 667 -EDQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 722
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 723 SGAP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRE 774
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE E + + P P +
Sbjct: 775 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRV 833
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+ N T+++ W + P +IGY ++
Sbjct: 834 RQPNLETINLEWDH--PEHPNGIMIGYTLK 861
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|242004281|ref|XP_002423033.1| Down syndrome cell adhesion molecule precursor, putative [Pediculus
humanus corporis]
gi|212505964|gb|EEB10295.1| Down syndrome cell adhesion molecule precursor, putative [Pediculus
humanus corporis]
Length = 1849
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 256/594 (43%), Gaps = 38/594 (6%)
Query: 12 CNPEAAPKPKFVWKKD--------GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
C E P P W+K +II + KI+ NG+L+I + + G Y C A
Sbjct: 743 CQAEGNPTPTVTWRKGIGKRPGTYHDIIDNNSDIKIYPNGSLIIEKLGEEHEGYYVCEAF 802
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G SK + ++ P ++ T ++ L+C + + + +W +G+
Sbjct: 803 NGIGTGLSKRIYLTVNAPPHFYSKHKNQTSKLGSSVVLKCEVTGDRPIKI--VWRKSGLT 860
Query: 124 I-GNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ G +N G+ L I D+G+Y C+ ++ G+ + V+ P
Sbjct: 861 MDGTASDYRHSIKELNSTEGIISELLIFTTLREDSGQYYCIATNSFGRDEMIMQLFVQEP 920
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P P + V+E + W PI I + + +S W EH V
Sbjct: 921 PDFPRNIHVIEKGSRFVKLGWVLSQDGNSPILQCIIEYKIDSDS-WL---EHTTQITVPV 976
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+ + + + L P TY+F++ A NELG PS + T ++ P AP +
Sbjct: 977 ---NQVSVLISSLRPAVTYQFRLFAENELGKSLPSD-VLEITTESEVPSGAPRNVQTSAL 1032
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKK--NDTEFQSETLKEYGNVGIAVVRIPSEF 357
+L + W+ RE N + Y + ++++ + ++Q + ++ + G +
Sbjct: 1033 SATELHVKWDSPERELWNGEILGYHVGFKEQRLKEDQYQYKNIESRSSAG-GETFLTDLK 1091
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T+Y + VQA N +GPGP S + ED+P +PQ + F S ++ V+WN +
Sbjct: 1092 KFTKYSIVVQAYNALGPGPTSNEALALTLEDVPSASPQDIRCAAFTSQSLQVSWNSVP-- 1149
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+ G L G+++ + ++ EE TT A+I GLQ T Y V+V+A+ NAG+
Sbjct: 1150 DTQLHGHLKGYKVMWENLEDFEEMDKPMTKITTALSAVIHGLQKFTNYSVQVLAFTNAGD 1209
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G S T P+ P + IK + NPT++ V+W + PS +I Y +++
Sbjct: 1210 GVASPPLQCLTNEDVPEVPRA---IKAVISNPTSIIVSW--LPPSRTNGILINYNLQIKS 1264
Query: 536 VDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D +I P + + + L+ +Y V A + G+ +SP I
Sbjct: 1265 ASNSPDAKPKRYSIPPDHTSYEEE--GLNKRLQYEFTVAASTKVGESPRTSPVI 1316
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
Y+ ++ A N++G S+V+ I + ++P AP+ V + ++T ++V W+ E RE
Sbjct: 992 YQFRLFAENELGKSLPSDVLEITTESEVPSGAPRNVQTSALSATELHVKWDSPE--RELW 1049
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA----LIVGLQPDTKYYVKVMAYNNAGE 477
G ++G+ + + KE +E Y + +R+ A + L+ TKY + V AYN G
Sbjct: 1050 NGEILGYHVGF-KEQRLKEDQYQYKNIESRSSAGGETFLTDLKKFTKYSIVVQAYNALGP 1108
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S L T P P + ++ V+W V + + GYKV +WE
Sbjct: 1109 GPTSNEALALTLEDVPSASPQDIRCAAFTSQSLQVSWNSVPDTQLHGHLKGYKV-MWENL 1167
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+D + + + L A I L Y ++VLAF+N GDG S P + E
Sbjct: 1168 EDFEEMDKPMTKITTALSAVIHGLQKFTNYSVQVLAFTNAGDGVASPPLQCLTNEDVPEV 1227
Query: 598 KSGSPALYSASTTLLL 613
A+ S T++++
Sbjct: 1228 PRAIKAVISNPTSIIV 1243
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNII-GSGGRRKIFENGN--LLISPVSRDDSGIYSCTAT 63
+ +I C+ P P W+KDG II + R KI ++ N L I+ ++RDD G+Y C A
Sbjct: 360 DTSILCSVTGHPTPTIYWRKDGLIIRNTSHRMKIIQDKNSRLEINRLTRDDKGMYQCFAK 419
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA------HTEELLDVAYIW 117
N + M + + + + + T+ ++ L+C A H +LD +
Sbjct: 420 NDYEMSQGTSEIRLGDSSPHLIYKFIEQTMQPGPSVSLKCIATGNPTPHFTWVLDGFSLP 479
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKTTV 174
++ + IG + + G ++ I++ + D GEY+C K+ VG +S +
Sbjct: 480 QNDRLVIGQY---------VTVHGDVISHVNISSVNVEDGGEYKCTAKNRVGSVSHSARL 530
Query: 175 IVEGPP 180
+ G P
Sbjct: 531 NIYGLP 536
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 12/166 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG------SGGRRKIFENGNLLISPVSRDDSGI 57
EG + C + P P ++W K G + +K G L+I V +D+G
Sbjct: 261 EGETAVLSCTSQGYPTPNYIWYKTNYETGGHLELLTMSEKKYIREGVLIIQNVGLNDNGR 320
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A N G + + +L VL P +P ++T+ + + + CS T Y W
Sbjct: 321 YVCIANNSMGSERIELQLTVL-IPITIHMMPQRVTVDLNHDTSILCSV-TGHPTPTIY-W 377
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+G+ I N I LEI + D G Y+C K+
Sbjct: 378 RKDGLIIRN---TSHRMKIIQDKNSRLEINRLTRDDKGMYQCFAKN 420
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 17/186 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSC 60
A G ++ + C P VW+KDG ++ R+++ NG L+I V D G+Y C
Sbjct: 546 AVAGHDLILQCPVAGYPIAFIVWEKDGQLLPVNRRQEVSPNGTLVIRKVDNLSDGGLYMC 605
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLD-----VA 114
A N G +SK I + ++PP+I + +++L AH +++
Sbjct: 606 MAKNKQGHHDSKTVQIEV-------KVPPRIAPFSFNKDLSEGVRAHLSCVVEKGDPPFT 658
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W + + + + L+ ++ + + + + G Y C + V + +
Sbjct: 659 ITWLKDREPLPS---DGLKIVGLDTHSSTVIVDQLAASHTGNYTCRAANQVAAVEYTAEL 715
Query: 175 IVEGPP 180
+V PP
Sbjct: 716 VVSVPP 721
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----NGNLL----ISPVSRDDSG 56
G +V++ C P P F W DG + R I + +G+++ IS V+ +D G
Sbjct: 452 GPSVSLKCIATGNPTPHFTWVLDGFSLPQNDRLVIGQYVTVHGDVISHVNISSVNVEDGG 511
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA--AHRNLQLRCSAHTEELLDVA 114
Y CTA N G RL + P + P TIA A +L L+C + +
Sbjct: 512 EYKCTAKNRVGSVSHSARLNIYGLP----MVRPMNTIAAVAGHDLILQCPVAGYPIAFI- 566
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
+W +G ++ ++ + +PN G L+ + +D G Y C+ K+ G +KT
Sbjct: 567 -VWEKDG-QLLPVNRRQEVSPN----GTLVIRKVDNLSDGGLYMCMAKNKQGHHDSKTVQ 620
Query: 175 I-VEGPP 180
I V+ PP
Sbjct: 621 IEVKVPP 627
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P WK+ + I R KI +G L I + R+DSG YSC N HG D
Sbjct: 1346 CKFVGKPEPLLHWKRWSHPIEPSSRFKIMNDGTLQIINLIRNDSGNYSCQVENQHGFDSI 1405
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
L V Q+PP + L ++ T+ L+V + NG
Sbjct: 1406 TYHLQV--------QIPPSAPL-------LHATSATKTSLNVQWKQGDNG 1440
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 139 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 198
++ G L+I N D+G Y C V++ G S + V+ PP P + KTS +
Sbjct: 1374 MNDGTLQIINLIRNDSGNYSCQVENQHGFDSITYHLQVQIPPSAP-LLHATSATKTSLNV 1432
Query: 199 QWTDGATNGRPI----THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP 254
QW G G I HYK ++ +W S IG++ Y + N L
Sbjct: 1433 QWKQGDNGGALIRGYYLHYK-KSKGDWKSI-------KIGRQQSNY-------LLNDLHC 1477
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
+ Y+ + A N +G GE SS A + P +I + + + L +
Sbjct: 1478 GTAYQIYIQAYNSIGKGEKSSI-----ISATTDGRKPIKISKEEFLLPNTTFVLLFLDKW 1532
Query: 315 KQNA-PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY-------TEYEVKV 366
N+ P Y+++ +R+K++T + TL ++ I ++Y TEY + V
Sbjct: 1533 LNNSCPITYFELNYRRKDETNW---TL-------VSNSLIKQKYYTLGNLQPGTEYVINV 1582
Query: 367 QAINDVG 373
+A N+ G
Sbjct: 1583 KAHNNAG 1589
>gi|431892899|gb|ELK03327.1| Neurofascin [Pteropus alecto]
Length = 1270
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 191/420 (45%), Gaps = 49/420 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 436 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 493
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IG+
Sbjct: 494 AENQVRLEV-KDPTRIYRMPEDQVTKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGS 552
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 553 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQTTPTNR 603
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 604 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 657
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 658 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 715
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 716 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 768
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED P+ AP V R NSTAI++
Sbjct: 769 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISL 828
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/548 (21%), Positives = 204/548 (37%), Gaps = 92/548 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 335 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 392
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 393 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 443
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 444 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 498
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P ++ + + T + T R + H + T +W E +
Sbjct: 499 RLEVKDP------TRIYRMPEDQVTKRGTTVQLECR-VKHDPSLKLT---VSWLKDDEPL 548
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + IA EL + ++P+
Sbjct: 549 -------YIGSRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQTTPT 601
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 602 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 651
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V A+N+VG P SE
Sbjct: 652 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 708
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 709 AP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRETW 760
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P+ P+ V I+
Sbjct: 761 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRV 820
Query: 505 INPTTVHV 512
+N T + +
Sbjct: 821 LNSTAISL 828
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 245 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNISEEDSGEYFCLA 302
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 303 SNKMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 359
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 360 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 415
Query: 182 L 182
+
Sbjct: 416 M 416
>gi|35215309|ref|NP_874385.1| neurofascin isoform 1 precursor [Mus musculus]
gi|38372295|sp|Q810U3.1|NFASC_MOUSE RecName: Full=Neurofascin; Flags: Precursor
gi|29466308|emb|CAD65849.1| Neurofascin [Mus musculus]
Length = 1240
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + R+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 844 EWD----HPEHPNGILIGYILRY 862
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 206/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSRFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 836 PNLETINLEWDH--PEHPNGILIGYILR 861
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSNKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|410986303|ref|XP_003999450.1| PREDICTED: neurofascin isoform 2 [Felis catus]
Length = 1244
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 510
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 511 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 569
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 570 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 620
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 621 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 674
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 675 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 732
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 733 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 785
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 786 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 845 EWD----HPEHPNGILIGYTLKY 863
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 352 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 409
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 410 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 460
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 461 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 515
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 516 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 565
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 566 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 618
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 619 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 668
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 669 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 725
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 726 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 777
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 778 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQ 836
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY ++
Sbjct: 837 PNLETINLEWDH--PEHPNGILIGYTLK 862
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 262 GMDLVLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 319
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 320 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 376
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 377 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 432
Query: 182 L 182
+
Sbjct: 433 M 433
>gi|301765660|ref|XP_002918247.1| PREDICTED: neurofascin-like isoform 1 [Ailuropoda melanoleuca]
Length = 1237
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVTWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + S Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G L G+ +KY
Sbjct: 844 EWD----HPEHPNGILTGYTLKY 862
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 122/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S R E ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPRNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K TW E +
Sbjct: 515 RLEVKDPTRI-FRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVTWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + IA EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 668 DQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 777 NNVTVWGSRYVVGSTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P + GY ++
Sbjct: 836 PNLETINLEWDH--PEHPNGILTGYTLK 861
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPRN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|45383896|ref|NP_989436.1| protein sidekick-1 precursor [Gallus gallus]
gi|82242600|sp|Q8AV58.1|SDK1_CHICK RecName: Full=Protein sidekick-1; Flags: Precursor
gi|23194254|gb|AAN15075.1| sidekick-1 [Gallus gallus]
Length = 2169
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 246/596 (41%), Gaps = 37/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
EG + C APKP WKK I+ SG R + E+G L I+PV D+G Y+
Sbjct: 445 EGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAGNYT 504
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + ++ P T+ LRC A + + + Y+W
Sbjct: 505 CHAVNSEGALNAFVMLTVWNR-TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKK 563
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG LL I+ D G+Y C V S G S + V
Sbjct: 564 DSVVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIEL 619
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S + W P+ +Y + N NS W +
Sbjct: 620 PHSPQNLLATLNSSYSRSVVLSWVRPFDGNSPVLYYMVELSEN-NSPW--------KVHL 670
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ + + L P TY+F+V A N++G G+ SS + + P + P P I
Sbjct: 671 SNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVAS 730
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q K + I +
Sbjct: 731 GRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDL 787
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V + N G G S VT ++ + +P PQ V NST I W+P
Sbjct: 788 IIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWSPPP- 846
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D P V ++ + I L+ T YY V+ +
Sbjct: 847 -QQFINGINQGYKLLAWPVDAPGSVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTT 905
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT KP + H+ I T++ V+W+ P + I GY++
Sbjct: 906 PGDGPRSAPQLLRTLE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIITGYQLS 960
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV + + T TL+ I LS Y + V A + G G ++S I+
Sbjct: 961 -WEV-YGRNESRLTRTLTNTTLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTIS 1014
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 37/407 (9%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V S + W G+ PI ++ + R N W S + + + I
Sbjct: 1441 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSI--------SHEATSCII 1492
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1493 ESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1552
Query: 310 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------NVGIA 349
P E N + Y+I++R+ KN + ++E + + +
Sbjct: 1553 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALT 1612
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ Y YEV + A N +G P S V +F E P +APQ + +++ + +
Sbjct: 1613 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLEL 1672
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW+P +N G + G++I YW+ D +T + + R + L T+Y V +
Sbjct: 1673 TWDPPPADSQN--GNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSASKNLTSHTRYLVCI 1730
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N AG+GP S RT++ AP PS + I TT++V+W P+ + GY
Sbjct: 1731 SAFNAAGDGPRSRPSAGRTHQAAPSA-PSFLVFSEITSTTLNVSWG--EPTAANGVLQGY 1787
Query: 530 KVRVWE---VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+V V+E Q +S+ I + DL+ G Y RV A
Sbjct: 1788 RV-VYEPLAPVQGVSKVVTVDIKGNWQRWLKVRDLTKGMTYLFRVQA 1833
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 186/426 (43%), Gaps = 36/426 (8%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNS 223
T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1009 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEE 1068
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
W VS H EVD + + N L P++ Y F++ N +G S PS T
Sbjct: 1069 EW--VSLH----EVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTL 1121
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ-SET 339
P AP + L + W PLP + N ++ Y+I FWR + Q S
Sbjct: 1122 QAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSAL 1177
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
LK + I +TEYE+++QA N +G GP +EVV + + E +P P+ V +
Sbjct: 1178 LKVISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSA 1237
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ST I +TW+ + +N G ++G++I Y +D E + L+ GL
Sbjct: 1238 EAVSSTQILLTWSAVPESEQN--GLILGYKILYKAKDLDSEPRSQTVRGNHTQSCLLSGL 1295
Query: 460 QPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
+ Y ++V+A+ G+G P S ERT AP PP + + T+V + W+
Sbjct: 1296 RKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAP-GPPIRLVFPEVRLTSVRIVWQP-- 1352
Query: 519 PSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAF 574
EEP I+GY++ ++ T + VG+T+ DL+P Y R A
Sbjct: 1353 ---PEEPNGIILGYQIAYRLASSSPNKF--TTVEVGSTVRQFTATDLTPESAYIFRTSAK 1407
Query: 575 SNGGDG 580
+ G G
Sbjct: 1408 TRQGWG 1413
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ +P+ YT Y +++ +N VG P S+ + + + P VAP V R + +++
Sbjct: 1084 MLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASESSLR 1143
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIK+W+ D + +S I L+ T+Y ++
Sbjct: 1144 MRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLKVISDRLERECTIQDLEEWTEYELQ 1203
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP +E RT P PP V + ++ T + +TW V S + I+G
Sbjct: 1204 IQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILG 1263
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D + T+ GN + ++ L Y +RVLAF+ GDG SSP +
Sbjct: 1264 YKILYKAKDLDSEPRSQTV--RGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVL 1321
Query: 588 T 588
T
Sbjct: 1322 T 1322
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 172/433 (39%), Gaps = 43/433 (9%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1330 PGPPIRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1387
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1388 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPQQLTTPQ 1439
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ S+ +P ++P Y+ + R+ + ++Q+ + ++ + F
Sbjct: 1440 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPF- 1498
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++V+A ND+G E+E VT +D+P P V ++++ V W P +
Sbjct: 1499 -TSYKLRVKATNDIGDSDYSAETEAVTTL--QDVPDEPPSSVLVTPHTTSSVLVQWQPPK 1555
Query: 416 LIRENIRGRLIGHRIKYWKED-------------NP-----EETAVYYLSRTTRNWAL-- 455
E++ G L+G+RI Y + D NP E T + AL
Sbjct: 1556 A--ESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALTT 1613
Query: 456 --IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L+ +Y V + AYN GE P S AP P + + ++ + + +T
Sbjct: 1614 YELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLELT 1673
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W + I GYK+ WE D + L A +L+ RY + + A
Sbjct: 1674 WDPPPADSQNGNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSAS-KNLTSHTRYLVCISA 1732
Query: 574 FSNGGDGRMSSPA 586
F+ GDG S P+
Sbjct: 1733 FNAAGDGPRSRPS 1745
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P + V + + T+QWT+G + +P T Y I AR + W + K+
Sbjct: 1852 EGSPGSPHEILVTK-SASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----DMFVKD 1905
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1906 IPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1956
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 76/193 (39%), Gaps = 26/193 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG+ I R I L+I S D+G Y A N + LI
Sbjct: 171 PRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLIH 230
Query: 78 LHGPSYYEQ---------LPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L S + +PP K + + L C A + ++ +W NG++I
Sbjct: 231 LSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKI-- 288
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL- 182
T I+ G L ITN + AD G Y C K ST K + + PP
Sbjct: 289 -------TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFT 341
Query: 183 --PGGVQVVEVHK 193
P GV + EV K
Sbjct: 342 AEPEGVILAEVEK 354
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P P VW KD + R K+ +G L I + D+GI+ C A+N
Sbjct: 355 DVDILCQAMGVPIPSLVWYKDSVPLSKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASN 414
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ L V + + Q P T+ L C +++ + +
Sbjct: 415 KAGEIQTYTYLDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILAS 474
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ + + ++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 475 GSVQIPRF----VLLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTV 522
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 8 VTIFCNPEAAPKPKF--VWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCT 61
VT+ C A P + +WK++G I SG GRR L I+ + D G+Y C
Sbjct: 263 VTLECVASARPVERLSIMWKRNGIKITSGISSFGRR-------LTITNPTSADVGMYFCE 315
Query: 62 ATNVHGMDESKGR---LIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIW 117
A + E R I L P Y+ P + +A +++ + C A + + +W
Sbjct: 316 A-KLRDSTEEPARAKAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSL--VW 372
Query: 118 THNGVRIGNMDLNELETP--NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+ V L++L+ P + + GGL I DAG ++C + G+I T T +
Sbjct: 373 YKDSV-----PLSKLQNPRYKVLLSGGL-RIHALRPQDAGIFQCFASNKAGEIQTYTYLD 426
Query: 176 V 176
V
Sbjct: 427 V 427
>gi|405970475|gb|EKC35374.1| Down syndrome cell adhesion molecule [Crassostrea gigas]
Length = 2111
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 229/530 (43%), Gaps = 38/530 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKD--------------GNIIGSGGRRKIFENGNLLISPVSR 52
+V++ C +PKP WKK N + +++F NG L+I
Sbjct: 708 SVSLDCLTTGSPKPTIQWKKAIGKNPGHYQTIRYVANDNATTASKQLFSNGTLVIRNAKE 767
Query: 53 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
+D G Y C + N G SK + +H P+ ++++ T+ +N + C A ++ L
Sbjct: 768 EDHGYYLCHSMNNVGPGISKVIFLRVHIPARFDEVEKNYTVIKGQNKTMDCQAIGDQPLS 827
Query: 113 VAYIWTHNGVRIGNMDLNE-LETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKIS 169
V W+ N + + L T G L L + A D G Y C K+ G
Sbjct: 828 VT--WSFNAQTLSTAGMTRRLITTTQTSRGKLSALTLRPAERGDTGFYVCTAKNKFGNAV 885
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
++V P P + +V+ + ++W PI Y + + + W V
Sbjct: 886 LAMRLVVLEQPESPQNLTLVKKTSRTIKVKWQPPYDGNSPILFYSVQYKEQ-KAVWQGVI 944
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+V + + ASI + L P YE +V+A N +GYG+ +S S +KP
Sbjct: 945 PNVTVS-----SDQLIASISD-LHPAYAYEVRVLANNSIGYGK-ASGSLIIKLDEEKPSG 997
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + L ISW P + QN + Y I +++K+ K +
Sbjct: 998 PPTEVNVKAIGSESLWISWMPPLPDHQNGEILGYYIGYKEKDSQSRFIYITKSIDGEFLP 1057
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
V I + +TEY V VQA N +G GP S +F+ ED+P PQGV + NS +I V
Sbjct: 1058 EVDIHNLEKFTEYTVHVQAYNQLGRGPPSPDAQVFTLEDVPSQPPQGVQATAINSRSIKV 1117
Query: 410 TWNPIELIRENIRGRLIGHRIKY----WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
W+P L + G L G++I Y + ED + AV ++ A I GL T Y
Sbjct: 1118 VWSPPPLF--TLHGILQGYKIYYKPVRFDEDESDSNAVV----SSELEATITGLSKYTNY 1171
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
++V+A+ GEG E T + AP++ P+ + ++ T+V +W+
Sbjct: 1172 SLQVLAFTRKGEGVRCEPLFVLTQQDAPER-PADIKALPVSNTSVMASWK 1220
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 15/258 (5%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
YEV+V A N +G G S + I E+ P P V + S ++ ++W P +N
Sbjct: 967 YEVRVLANNSIGYGKASGSLIIKLDEEKPSGPPTEVNVKAIGSESLWISWMPPLPDHQN- 1025
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWAL----IVGLQPDTKYYVKVMAYNNAGE 477
G ++G+ I Y ++D+ ++ Y++++ L I L+ T+Y V V AYN G
Sbjct: 1026 -GEILGYYIGYKEKDS--QSRFIYITKSIDGEFLPEVDIHNLEKFTEYTVHVQAYNQLGR 1082
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII-GYKV--RVW 534
GP S T P +PP V IN ++ V W P F I+ GYK+ +
Sbjct: 1083 GPPSPDAQVFTLEDVPSQPPQGVQATAINSRSIKVVWS-PPPLFTLHGILQGYKIYYKPV 1141
Query: 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
D+D S +N V + L+A I LS Y ++VLAF+ G+G P +
Sbjct: 1142 RFDEDESDSNAV---VSSELEATITGLSKYTNYSLQVLAFTRKGEGVRCEPLFVLTQQDA 1198
Query: 595 KEFKSGSPALYSASTTLL 612
E + AL ++T+++
Sbjct: 1199 PERPADIKALPVSNTSVM 1216
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG V + C + P PK+ W + +I GNL+I DSG+Y C A+
Sbjct: 242 EGEKVELPCVASSNPLPKYRWSFSNKELVIDSVSRIQRAGNLVIVDAKVTDSGVYMCNAS 301
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N HG +L V + P P + + ++++ C+ + V W +G +
Sbjct: 302 NSHGSATGTTQLTVQY-PLSATIDPQQQKVDSNQSAIFNCTVLGHPIKSV--FWMKDGFK 358
Query: 124 IGNMDLNELETPNINI---DGGLLEITNASFADAGEYECVVKS 163
I +PN + D +L I + D G Y+CVVK+
Sbjct: 359 I---------SPNQKVRITDQSVLTIHAVNKKDQGMYQCVVKN 392
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
A I L P Y V+V+A N+ G G S + + + P PP+ V++K I ++ ++
Sbjct: 956 ASISDLHPAYAYEVRVLANNSIGYGKASGSLIIKLDEEKPSGPPTEVNVKAIGSESLWIS 1015
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD------ADIVDLSPGKRY 567
W P + I+GY + E D + I + ++D DI +L Y
Sbjct: 1016 WMPPLPDHQNGEILGYYIGYKEKD-----SQSRFIYITKSIDGEFLPEVDIHNLEKFTEY 1070
Query: 568 HMRVLAFSNGGDGRMSSPAITFQM 591
+ V A++ G G S A F +
Sbjct: 1071 TVHVQAYNQLGRGPPSPDAQVFTL 1094
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 17/165 (10%)
Query: 24 WKKDGNIIGSGGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDESKGRLIVLH--- 79
W K I +G R + +G L I + +D +Y+C A N+ DE + LH
Sbjct: 162 WSKGTKPIQAGDRISVLSDGELHIRDIRDEDKYSMYTCVARNILTGDEKPSKAAYLHVHD 221
Query: 80 -----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 134
P + + ++T+ ++L C A + L Y W+ + + ++ ++
Sbjct: 222 PPASWTPPKIDDIMTQLTVNEGEKVELPCVASSNPL--PKYRWSFSNKELVIDSVSRIQR 279
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G L I +A D+G Y C ++ G + T + V+ P
Sbjct: 280 ------AGNLVIVDAKVTDSGVYMCNASNSHGSATGTTQLTVQYP 318
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 20/179 (11%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P W KDG I + +I + L I V++ D G+Y C N +
Sbjct: 340 CTVLGHPIKSVFWMKDGFKISPNQKVRITDQSVLTIHAVNKKDQGMYQCVVKNEETSSQG 399
Query: 72 KGRLIV-LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY-----IWTHNG-VRI 124
+L++ P++ + + + +RC A D+ + I T N ++I
Sbjct: 400 TAQLLLGAAHPTFVDTFINQYAQTGQKT-SIRCIATGNPTPDIRWKLDGEILTENSDIKI 458
Query: 125 GNMDLNELETPNINIDGGLLE---ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G+ +N G ++ I+N GEY+C+ + VG+I + V G P
Sbjct: 459 GSF---------LNPAGDVVSYVNISNVHLHYGGEYQCISSNEVGEIHHVGQMFVYGVP 508
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FEN--GNLL----ISPVSR 52
YA G +I C P P WK DG I+ KI F N G+++ IS V
Sbjct: 420 YAQTGQKTSIRCIATGNPTPDIRWKLDGEILTENSDIKIGSFLNPAGDVVSYVNISNVHL 479
Query: 53 DDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112
G Y C ++N G G++ V P + + +T A +N +RC +
Sbjct: 480 HYGGEYQCISSNEVGEIHHVGQMFVYGVP--FVRPMENVTTTAGKNFSIRCYVAGYPVSQ 537
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
V + HN + L ++ + I+G + D GEY C K++ G+
Sbjct: 538 VTWSKGHN--VLPKNHLQKVVNDTLFIEGVQKD------HDVGEYTCTAKNSNGQ 584
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
+T+ C P P WK G + R +I +NG+L I+ V D+ YSC + NV+G
Sbjct: 1314 LTLQCLAVGDPAPIIKWKIRGRPLIVNERLQILKNGSLHINGVLGSDAANYSCRSENVYG 1373
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAA 95
DE + V P PP + + A
Sbjct: 1374 SDEINYAISVQAPPK-----PPSLYVVA 1396
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T Y+ + A+N +G P+S+++++ + P + PQ + + N T++++ N I
Sbjct: 1451 TTYKFYINALNRLGYSPDSDIMSVKTNGSTPIMPPQSMLLKVINVTSVDLDLN--TWITS 1508
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
R + K W + E + S T + + L P T Y +KV+A+++AG
Sbjct: 1509 GCPIRFFSVQYKVWGDTAWTEVSNNIQSNKTIH--TVEDLHPATWYVMKVIAHSDAGSTE 1566
Query: 480 ESERYLERTYR 490
++ TY
Sbjct: 1567 SELKFATLTYH 1577
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 93/233 (39%), Gaps = 35/233 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCTAT 63
G N +I C P + W K N++ +K+ N L I V +D D G Y+CTA
Sbjct: 521 GKNFSIRCYVAGYPVSQVTWSKGHNVLPKNHLQKVV-NDTLFIEGVQKDHDVGEYTCTAK 579
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQL------RCSAHT-EELLDVAYI 116
N +G + + + PP I + N +L C+ T ++ L + +
Sbjct: 580 NSNGQGSYRHVYVNVVE-------PPVIDAFSFENKKLGDRIVVTCAVKTGDQPLHI--V 630
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
WT +G I DL ++ +N +L I +A+ G Y C + + T+ V
Sbjct: 631 WTKDGEVIPP-DLG-IQVQKLNDFITMLSIGDANPKHNGNYTCQASNAAATTNYTATLRV 688
Query: 177 EGPPGL---PGGVQVVEVHKTSA----------TIQWTDGATNGRPITHYKII 216
+ PP PG V+ + S TIQW G+ HY+ I
Sbjct: 689 DVPPRWVMEPGDSFVILKNSVSLDCLTTGSPKPTIQWKKAI--GKNPGHYQTI 739
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 12/136 (8%)
Query: 139 IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATI 198
+ G L I +DA Y C ++ G + V+ PP P + VV ++ +
Sbjct: 1346 LKNGSLHINGVLGSDAANYSCRSENVYGSDEINYAISVQAPPK-PPSLYVVATTTSTIQM 1404
Query: 199 QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 258
W G+ G PI + I + +H + +++ + ++ +L +TY
Sbjct: 1405 NWRSGSNGGSPIQGFVIHFK----------KDHEVWQKIHAGPTNRTQTVTGLLC-GTTY 1453
Query: 259 EFKVIAGNELGYGEPS 274
+F + A N LGY S
Sbjct: 1454 KFYINALNRLGYSPDS 1469
>gi|348508414|ref|XP_003441749.1| PREDICTED: Down syndrome cell adhesion molecule-like [Oreochromis
niloticus]
Length = 2073
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 235/525 (44%), Gaps = 31/525 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNI---------IGSGGRRKIFENGNLLISPVSRDDS 55
G VT+ C+ E P P VW+ + +G R ++ NG+LLI V DDS
Sbjct: 757 GKTVTLNCSAEGYPPPTIVWEHSKGAGVPQFQPIPLNTGSRIQLLSNGSLLIKHVLEDDS 816
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C +N G D SK + + P+ P ++ C AH E+ + V +
Sbjct: 817 GFYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRW 876
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKT 172
RI N + + + + L I D+G + C ++ G+
Sbjct: 877 ---EKEERIINPETSRYVVTVKEVADEVISTLVIMPTLREDSGFFSCHAINSFGEDRGII 933
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ PP P V++ +V + ++WT G PIT Y I + N +++W +
Sbjct: 934 QLTVQEPPD-PPEVEIRDVKDRTIALRWTMGFDGNSPITGYDIECK-NKSASWLSAQ--- 988
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ K+V +A+I + L P STY +++A N +G PS+ T P P
Sbjct: 989 VTKDVSPQL--NQATIID-LHPSSTYNIRMVAKNVIGNSNPSN-ELTITTDEAAPDGPPQ 1044
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIA 349
+ + +SW+P + QN Y++ +R+ + +F ++ G+ +
Sbjct: 1045 DVTLEPTSPQSIKVSWKPPQKHLQNGVIRGYQVGYREYSPGGSHQFTIISVDSTGDTTES 1104
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+V + + +T+Y V VQA N G GP S+ V + ED+P P+ V + + I++
Sbjct: 1105 IV-LDNLKKFTQYSVVVQAANRAGTGPSSQQVVTKTLEDVPSRPPENVLAVAKSPEVISL 1163
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+W P L RE + G L G+R+ YW E T++ + GL+ T Y ++V
Sbjct: 1164 SWIP--LPREALNGNLQGYRVIYWANLPDGELGEIRNMTTSQPSLELDGLEKYTNYSIQV 1221
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+A+ NAG+G SE+ RT P PP+ V + + V+V+W
Sbjct: 1222 LAFTNAGDGVRSEQIYVRTKEDVP-GPPAGVKAAASSGSEVYVSW 1265
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 149/612 (24%), Positives = 238/612 (38%), Gaps = 80/612 (13%)
Query: 5 GGNVTIFCNPEAAPKP-KFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSC 60
G V I C + +P W+KDG I + I +L IS ++ D +G Y+C
Sbjct: 663 GQRVFIPCVVMSGDRPLDITWQKDGRPIPASLGVTVDNIDFTSSLRISNLTPDHNGNYTC 722
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N + E + +LIV P + Q + I + + L CSA E +W H+
Sbjct: 723 IARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYG-KTVTLNCSA--EGYPPPTIVWEHS 779
Query: 121 ---GV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
GV + + LN + +G LL I + D+G Y C V + VG +K+ +
Sbjct: 780 KGAGVPQFQPIPLNTGSRIQLLSNGSLL-IKHVLEDDSGFYLCKVSNDVGADVSKSMYLT 838
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P + + T+ Q + + I H + W E +I E
Sbjct: 839 VKIPAM-----ITSYPNTTLATQGEEKRMSC--IAHGEKPIMVRWEK-----EERIINPE 886
Query: 237 VDRYT-GRKEASIE--NVLVPWSTYE-----FKVIAGNELGYGE----------PSSPSP 278
RY KE + E + LV T F A N G P P
Sbjct: 887 TSRYVVTVKEVADEVISTLVIMPTLREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEV 946
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
+ D+ +G G N+P Y I + K+ + ++
Sbjct: 947 EIRDVKDRTIALRWTMGFDG------------------NSPITGYDIECKNKSASWLSAQ 988
Query: 339 TLKEYG---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
K+ N + PS + Y +++ A N +G S +TI + E P PQ
Sbjct: 989 VTKDVSPQLNQATIIDLHPS----STYNIRMVAKNVIGNSNPSNELTITTDEAAPDGPPQ 1044
Query: 396 GVFSRGFNSTAINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453
V + +I V+W P + +N IRG +G+R +Y + + T + S
Sbjct: 1045 DVTLEPTSPQSIKVSWKPPQKHLQNGVIRGYQVGYR-EYSPGGSHQFTIISVDSTGDTTE 1103
Query: 454 ALIV-GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
++++ L+ T+Y V V A N AG GP S++ + +T P +PP V +P + +
Sbjct: 1104 SIVLDNLKKFTQYSVVVQAANRAGTGPSSQQVVTKTLEDVPSRPPENVLAVAKSPEVISL 1163
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMS----RANDTIIPVGNTLDADIVDLSPGKRYH 568
+W + + GY+V W D R T P +L+ D L Y
Sbjct: 1164 SWIPLPREALNGNLQGYRVIYWANLPDGELGEIRNMTTSQP---SLELD--GLEKYTNYS 1218
Query: 569 MRVLAFSNGGDG 580
++VLAF+N GDG
Sbjct: 1219 IQVLAFTNAGDG 1230
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 193/505 (38%), Gaps = 59/505 (11%)
Query: 19 KPKFV-WKKDGNIIGSGGRRKIFEN--------GNLLISPVSRDDSGIYSCTATNVHGMD 69
KP V W+K+ II R + L+I P R+DSG +SC A N G D
Sbjct: 870 KPIMVRWEKEERIINPETSRYVVTVKEVADEVISTLVIMPTLREDSGFFSCHAINSFGED 929
Query: 70 ESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+L V P PP++ I R + LR + D T + N
Sbjct: 930 RGIIQLTVQEPPD-----PPEVEIRDVKDRTIALRWTMG----FDGNSPITGYDIECKNK 980
Query: 128 D---LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE--GPP 180
L+ T +++ I + + V K+ +G S + T+ + P
Sbjct: 981 SASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIRMVAKNVIGNSNPSNELTITTDEAAPD 1040
Query: 181 GLPGGVQVVEVHKTSATIQW---TDGATNGRPITHYKIIAR--TNWNSTWFNVSEHVIGK 235
G P V + S + W NG I Y++ R + S F +
Sbjct: 1041 GPPQDVTLEPTSPQSIKVSWKPPQKHLQNGV-IRGYQVGYREYSPGGSHQFTI------I 1093
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
VD E+ + + L ++ Y V A N G G PSS T D P + P +
Sbjct: 1094 SVDSTGDTTESIVLDNLKKFTQYSVVVQAANRAGTG-PSSQQVVTKTLEDVPSRPPENVL 1152
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNI--YYKIFWRKKNDTEFQSETLKEYGNVGIA--VV 351
+S+SW PLPRE N N+ Y I+W D E L E N+ + +
Sbjct: 1153 AVAKSPEVISLSWIPLPREALNG-NLQGYRVIYWANLPDGE-----LGEIRNMTTSQPSL 1206
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YT Y ++V A + G G SE + + + ED+P P GV + + + + V+W
Sbjct: 1207 ELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPG-PPAGVKAAASSGSEVYVSW 1265
Query: 412 NPIELIRENIRGRLI-GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
P + IR ++ + E + Y+ R I L +Y + V+
Sbjct: 1266 LPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDAYIYR-------IPNLVLTRQYSIWVV 1318
Query: 471 AYNNAGEGPESERYLERTYRKAPQK 495
A AG G SE+ + KAP +
Sbjct: 1319 AVTAAGHGNNSEKITVQPLAKAPAR 1343
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 16/179 (8%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V + C P PK+ W KD + + R +G LLI DSG Y C N +G
Sbjct: 296 VELPCKASGYPTPKYRWLKDNSPLELDSRIHQTTSG-LLIESTQPSDSGTYVCEVWNSYG 354
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--- 124
E GRL V P P K+ + + L CS + +++ W NG I
Sbjct: 355 TAEVMGRLYVKQ-PLKVVVSPRKVKGSVGSKVSLSCSVSGSDEYELS--WYRNGEIIYPG 411
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
N+ L N+ ++G S +D G Y+C + GK+S + V V G P
Sbjct: 412 NNVRFIGLNRENLMMEG-------MSKSDGGAYQCFARK--GKMSAQDFVQVILEDGTP 461
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
N A I+ L P + Y ++++A N G S T AP PP V ++ +P ++
Sbjct: 998 NQATIIDLHPSSTYNIRMVAKNVIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIK 1057
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---GNTLDADIVD-LSPGKRY 567
V+W+ + I GY+V E S TII V G+T ++ ++D L +Y
Sbjct: 1058 VSWKPPQKHLQNGVIRGYQVGYREYSPGGSH-QFTIISVDSTGDTTESIVLDNLKKFTQY 1116
Query: 568 HMRVLAFSNGGDGRMSSPAIT 588
+ V A + G G S +T
Sbjct: 1117 SVVVQAANRAGTGPSSQQVVT 1137
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGS------GGRRKIFENGNLLISPVSRDDSGIYSC 60
++ + C P P W K GN G+ GRR ++ NG+ LI V +DSG YSC
Sbjct: 1358 DIVLPCRAVGDPPPTIKWLK-GNTNGTPTPVLVDGRRIVYGNGSFLIRTVKAEDSGNYSC 1416
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPP 89
A+N G DE L V Q+PP
Sbjct: 1417 VASNNWGSDEITLNLQV--------QVPP 1437
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 20/183 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FEN------GNLLISPVSRDDSGIYS 59
V + CN + P P+ W D + + + +E L ++ D G+Y
Sbjct: 478 VFLVCNVKGTPPPRCTWSLDDDPVIKDSHHHLGHYETHEGHVVSQLNVTHTQVQDGGVYR 537
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CT +N G+ + R+ V S IT A R+ + C + W
Sbjct: 538 CTCSNSAGVVYHQARINVRGRASIRPM--KNITAIAGRDAFVHCRVIGYPYYSIK--WYK 593
Query: 120 NGVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVE 177
N + N E + G L+++N DAGEY C V K+ +++ V V
Sbjct: 594 NSALLPFNHRQRAFE------NNGTLKLSNVQQVDAGEYNCKVMVQPNKMDSQSVHVRVR 647
Query: 178 GPP 180
PP
Sbjct: 648 VPP 650
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 18/183 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTAT 63
G + + C P W K+ ++ R++ FE NG L +S V + D+G Y+C
Sbjct: 572 GRDAFVHCRVIGYPYYSIKWYKNSALLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCKVM 631
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY------IW 117
+S+ + + P Y + + R + LD+ + I
Sbjct: 632 VQPNKMDSQSVHVRVRVPPYIQPFEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIP 691
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
GV + N+D L I+N + G Y C+ ++ + ++ +IV
Sbjct: 692 ASLGVTVDNIDFT-----------SSLRISNLTPDHNGNYTCIARNEAAVVEHQSQLIVR 740
Query: 178 GPP 180
PP
Sbjct: 741 VPP 743
>gi|348578155|ref|XP_003474849.1| PREDICTED: neurofascin isoform 4 [Cavia porcellus]
Length = 1239
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 510
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + +QL C + L + W + + IGN
Sbjct: 511 AENQVRLEV-KDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSWLKDDEPLYIGN 569
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 570 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAHLTVLADQATPTNR 620
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 621 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYIV----QFEEDQFQPG-- 674
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 675 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 732
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 733 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 785
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 786 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G L G+ ++Y
Sbjct: 845 EWD----HPEHPNGILTGYTLRY 863
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/570 (20%), Positives = 205/570 (35%), Gaps = 99/570 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 352 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 409
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 410 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 460
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 461 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 515
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 516 RLEVKDPTRIFRMPEDQVVKRGTTVQLECRVKHDPSLRLTVSW---LKDDEPLYIGNRMK 572
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 573 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAHLT---VLADQATPTNRLAA---LPK 626
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 627 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYIVQFE-- 667
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 668 -EDQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 723
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 724 SGAP--PESNPSDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETRE 775
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE + + + P P +
Sbjct: 776 TWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRV 834
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+ N T+++ W + P + GY +R
Sbjct: 835 RQPNLETINLEWDH--PEHPNGILTGYTLR 862
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 262 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 319
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 320 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 376
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 377 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 432
Query: 182 L 182
+
Sbjct: 433 M 433
>gi|410984299|ref|XP_003998467.1| PREDICTED: protein sidekick-1 [Felis catus]
Length = 2117
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/556 (26%), Positives = 239/556 (42%), Gaps = 37/556 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G T+ C APKP W++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 400 DGMTATLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYT 459
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G + L V + S ++ I L C A + + + Y+W
Sbjct: 460 CYATNTEGSLSASAALTVWNRTSIVNPPEDRVVIKG-TTATLHCGATHDPRITLRYVWKK 518
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 519 DNAIITPSGSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEILSEGGNDSRTARLEVIEL 574
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + H + T+ W P+ +Y I+ + NS W V +G E+
Sbjct: 575 PHSPQNLLASLNSSHSHTVTLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEM 632
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T R L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 633 TGVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLVLPEEPPSAPPKNIVAS 685
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 686 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTEL 742
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 743 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTDAVNSTTIQFLWNPPP- 801
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W + PE V ++ + I L+ T Y+ V+ +
Sbjct: 802 -QQFINGINQGYKLLAWPAEIPEAITVVTIAPDFHGAHHGYITNLKKFTAYFTSVLCFTT 860
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT+ KP + H+ I T++ V+W+ P + I GY+V
Sbjct: 861 PGDGPPSTPQLVRTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGVITGYQVS 915
Query: 533 VWEV-DQDMSRANDTI 547
WEV ++ SR T+
Sbjct: 916 -WEVYGRNGSRLTHTL 930
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 45/356 (12%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W++ ++S V+R
Sbjct: 1392 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWHTYSSSISHEATACAVER-- 1449
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + PS I
Sbjct: 1450 ----------LRPFTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSSISVTPHTT 1499
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 345
+ I W+P E N Y+I++R+ + S+TLK +
Sbjct: 1500 SSVLIQWQPPRDESLNGLLQGYRIYYRELESEASAATASKTLKTPSALRAELTAQSSFKT 1559
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1560 VNSSSTLTTYELTHLKKYRRYEVVLTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1619
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET---AVYYLSRTTRNWALIVG 458
++ + VTW P +N G + G+++ YW+ D+ ET V +L T + G
Sbjct: 1620 LTASQLEVTWEPPPPESQN--GNIQGYKVYYWEADSQNETEKMKVLFLPETVLKLKNLTG 1677
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
P Y V + A+N AG+GP S+ RT++ AP PS + I TT++V+W
Sbjct: 1678 HTP---YRVSISAFNAAGDGPRSDPRQGRTHQAAPGT-PSFLAFSEITSTTLNVSW 1729
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 185/423 (43%), Gaps = 53/423 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--- 236
PG P + + + SAT+Q+ G I+ + + + IG+E
Sbjct: 977 PGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------AIGEEEEW 1025
Query: 237 VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
V Y E + + L P++ Y F++ N +G S S T P AP+
Sbjct: 1026 VSLYEEENEPDAQTLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRVIQTLQAPPDVAPT 1085
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 349
I L + W PLP + N ++ Y+I +WR + ++ + +
Sbjct: 1086 SITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRPDLRPQALAQVIND------- 1138
Query: 350 VVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
R+ EF +TEYE+++QA N +G GP SE V + E +P AP+ V + +
Sbjct: 1139 --RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSEAVRGRTRESVPSAAPENVSAEAVS 1196
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPD 462
ST I +TW + +N G ++G++I + KE +PE + T++ AL+ GL+
Sbjct: 1197 STQILLTWASVPEQDQN--GLILGYKILFRAKELDPEPRSHVVRGNHTQS-ALLTGLRKF 1253
Query: 463 TKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y ++V+A+ G G P S LERT AP PP + + T+V + W+
Sbjct: 1254 VLYELQVLAFTRIGNGVPSSPLLLERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP----- 1307
Query: 522 EEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNG 577
EEP I+GY++ S T + VG T+ +L+P Y R+ A +
Sbjct: 1308 PEEPNGIILGYQIAYRLASS--SPNTFTTVEVGATVRQFTATELAPESAYIFRLSAKTRQ 1365
Query: 578 GDG 580
G G
Sbjct: 1366 GWG 1368
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%), Gaps = 8/241 (3%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+ IP+ YT Y +++ +N VG P S+ + + + P VAP + R + T++ +
Sbjct: 1040 LEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRL 1099
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G+RIKYW+ D P+ A R R + I GL+ T+Y ++
Sbjct: 1100 RWVPLPDSQYNGNPESVGYRIKYWRPDLRPQALAQVINDRLEREFT-IEGLEEWTEYELQ 1158
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP SE RT P P V + ++ T + +TW V + I+G
Sbjct: 1159 MQAFNAIGAGPWSEAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILG 1218
Query: 529 YKV--RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
YK+ R E+D + ++ +T A + L Y ++VLAF+ G+G SSP
Sbjct: 1219 YKILFRAKELDPE---PRSHVVRGNHTQSALLTGLRKFVLYELQVLAFTRIGNGVPSSPL 1275
Query: 587 I 587
+
Sbjct: 1276 L 1276
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 187/468 (39%), Gaps = 51/468 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1285 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1342
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1343 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1394
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+ + + + AV R+
Sbjct: 1395 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWHTYSSSISHEATACAVERLRP-- 1452
Query: 358 YYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T Y+++++A ND+G +E + + +D+P P + ++++ + W P
Sbjct: 1453 -FTSYKLRLKATNDIGDSDFSAETDAVTTLQDVPGEPPSSISVTPHTTSSVLIQWQPPR- 1510
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYL-----------------------SRTTRNW 453
E++ G L G+RI Y++E E +A S +T
Sbjct: 1511 -DESLNGLLQGYRI-YYRELESEASAATASKTLKTPSALRAELTAQSSFKTVNSSSTLTT 1568
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L+ +Y V + AYN GE P S AP P V + + + + VT
Sbjct: 1569 YELTHLKKYRRYEVVLTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVT 1628
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W P + I GYKV WE D ++ + T+ + +L+ Y + + A
Sbjct: 1629 WEPPPPESQNGNIQGYKVYYWEADSQNETEKMKVLFLPETV-LKLKNLTGHTPYRVSISA 1687
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
F+ GDG S P + G + G+P+ + S + S+TL +
Sbjct: 1688 FNAAGDGPRSDP----RQGRTHQAAPGTPSFLAFSE----ITSTTLNV 1727
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 4/228 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 646 YQFRVCAVNQVGKGQYSAETSRLVLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 705
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 706 --GVLRGYILRYRLAGLPGEHQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVF 763
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V +N TT+ W F GYK+ W +
Sbjct: 764 SRAVTEYTLQGVPTAPPQNVQTDAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPAEIPE 823
Query: 541 SRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ TI P I +L Y VL F+ GDG S+P +
Sbjct: 824 AITVVTIAPDFHGAHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQL 871
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 176/425 (41%), Gaps = 29/425 (6%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNS 223
S++ ++ PP + P + V +TS ++W D NG P + Y+I W
Sbjct: 1069 SSRVIQTLQAPPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRI---KYWRP 1125
Query: 224 TWF-NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
VI ++R E +IE L W+ YE ++ A N +G G P S + + T
Sbjct: 1126 DLRPQALAQVINDRLER-----EFTIEG-LEEWTEYELQMQAFNAIGAG-PWSEAVRGRT 1178
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K D E +S ++
Sbjct: 1179 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKELDPEPRSHVVR 1238
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P S ++ + +D P + VF
Sbjct: 1239 --GNHTQSAL-LTGLRKFVLYELQVLAFTRIGNGVPSSPLLLERTKDDAPGPPVRLVFPE 1295
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1296 -VRLTSVRIVWQP----PEEPNGIILGYQIAYRLASSSPNTFTTVEVGATVRQFT-ATEL 1349
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1350 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPG 1409
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
S PI + V+V E+ + I T A + L P Y +R+ A ++ GD
Sbjct: 1410 SDGASPIRYFTVQVRELPGGEWHTYSSSISHEATACA-VERLRPFTSYKLRLKATNDIGD 1468
Query: 580 GRMSS 584
S+
Sbjct: 1469 SDFSA 1473
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 16/176 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD IG R K+ +G L I + +DSGI+ C A+N
Sbjct: 311 VDIVCRAMGVPLPTLQWYKDAVSIGKLHNPRYKMLASGGLRIQHLRPEDSGIFQCFASND 370
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHN 120
G ++ L V + + QLP T+ LRC + +I
Sbjct: 371 GGEIQTYTYLDVTNVAPAFTQLPVDTTVTDGMTATLRCEVSGAPKPAITWRRGKHILASG 430
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+IT DAG Y C +T G +S + V
Sbjct: 431 SVRIPRFML---------LESGGLQITPVFIQDAGNYTCYATNTEGSLSASAALTV 477
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G+ P T Y I R + W + K+
Sbjct: 1807 EGSPGSPRDVSVSK-SASELTLQWTEGSVGRTPTTGYVIEVRPSDEGLW-----DMFAKD 1860
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1861 IPRSATSYTVSLDT-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1911
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 23/184 (12%)
Query: 11 FCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70
F + P+P+ W ++G+ I R I L+I + D+ +Y A N D
Sbjct: 119 FLPISSCPRPQVTWFREGHKIVPSSRIAITLENQLVILAATAGDARVYYAQAVNERNGDS 178
Query: 71 SKGRLIVLH---GPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTH 119
L+ L E + P I I A + L C A+ + ++ W
Sbjct: 179 KTSPLVHLSVAGDAGAPETVAPVIVIPPGNRSVVAGSSEITLECVANARPVESLSVNWKR 238
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIV 176
NGVR+ T ++ G L I+N + AD G Y C + ST + K + +
Sbjct: 239 NGVRV---------TSGLHGFGRRLTISNPTSADTGAYVCEATLTGSTFEPATAKAFLSI 289
Query: 177 EGPP 180
PP
Sbjct: 290 IEPP 293
>gi|340710644|ref|XP_003393897.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Bombus terrestris]
Length = 2164
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/614 (27%), Positives = 256/614 (41%), Gaps = 48/614 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRK--IFENGNLLISPVSRDDS 55
G V+I C E P P WK+ D +G G + NG+L+IS VSRD +
Sbjct: 894 GHGVSIACQAEGFPIPTVTWKQSIGDTPGDYRELGYTGTEGAGVAGNGSLVISRVSRDHA 953
Query: 56 GIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
G Y C A+N G SK RL V GP + + ++ ++ LRC A + LD++
Sbjct: 954 GFYLCQASNGIGPGLSKLIRLTVHAGPQVSVKTRQE-SVRRGESVTLRCEAEGDAPLDLS 1012
Query: 115 YIWTHNGVRIG-NMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKIST 170
W R+ N D+ N + G + L IT A+ D G+Y CV + G
Sbjct: 1013 --WRARDSRVDPNYDV-RYTIDNQKVSGRVISELRITQANHIDRGDYMCVATNAYGHARA 1069
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKIIARTNWNST 224
++V+ PP P + V E S + W+ D A PIT+Y I+
Sbjct: 1070 SIKLLVQEPPNFPRNLHVAEQGSRSLLLAWSSPSSEQDPAHASSPITNY-IVQYKEAQDV 1128
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
W EH K V G ++ + L P ++Y F+V+A N LG PS T
Sbjct: 1129 WH---EHNTQKMV---AGDNTVALVSPLKPATSYHFRVLAENHLGTSAPSDIL-HAQTDG 1181
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKE 342
+ P P + + ++W+P R N + Y I + ND +
Sbjct: 1182 EIPGGPPRHVIAEPLGPQQVKVTWQPPDRSLWNGELLGYTISYTNLGGNDQSVNITRVGI 1241
Query: 343 YGN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
GN G R+ YT+Y V V+A N+ G GP S+ V++ + ED+P PQ V
Sbjct: 1242 TGNGDGTYDYRLTGLRKYTQYSVVVKAFNNKGDGPGSDPVSVQTLEDVPSAPPQTVACAA 1301
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV-GLQ 460
I VTW P + + G + G+++ Y E ++ + + ++ GL
Sbjct: 1302 LTGQNIQVTWKPPP--SDKVHGVVQGYKLLYEAASAVLEQQAGRETKISHALSTVLHGLS 1359
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVS 518
P T Y V+V+AY AGEG S T P P +K + N V ++W +
Sbjct: 1360 PYTNYTVQVLAYTRAGEGVTSSPVSCTTEETVPDAPE---RVKAVISNEDAVVISW--LP 1414
Query: 519 PSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
P + Y V V +DQ + + +P N L + L + Y V A +
Sbjct: 1415 PRRPNGILTKYTVYVRVLDQGQEVKITKSSLPAQN-LHHEATGLKLRESYEAWVTASTKM 1473
Query: 578 GDGRMSSPAITFQM 591
G G S+P I Q+
Sbjct: 1474 GQG-PSTPVIKLQL 1486
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + C+ P+ W KDG + +GGR + + + V+R+D G+Y C +
Sbjct: 357 GKAAHLTCSASGFPQTALYWLKDGQPLRTGGRIRAVSRERISVMAVAREDRGMYQCFVRS 416
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ M + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 417 EYEMAQGIAELRL-------GEIAPQLVYRFIEQTMQTGPSVSLKCSAAGNPTPQIS--W 467
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFA---DAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ N S D GEYEC+ S G+ S +
Sbjct: 468 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNISSVKSEDGGEYECIASSRAGEASHSAKL 526
Query: 175 IVEGPP 180
+ G P
Sbjct: 527 NIYGLP 532
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
A G I C P VW+KDG + + R+++ NG+L I V R D G Y+C
Sbjct: 542 AVAGKQFHIKCPVAGYPIESIVWEKDGVRLPTNMRQRV-ANGSLFIDTVQRAADQGTYTC 600
Query: 61 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEEL---L 111
TA N H + R++V PPKIT A N+ R S + L
Sbjct: 601 TARNKHNFTSQRSVEVRVLV----------PPKITPFSFARDLNVGHRTSVQCVVVTGDL 650
Query: 112 DVAYIWTHNGVRIGNMDLNELETPN 136
+ + W + V I + ++ +TP+
Sbjct: 651 PLTFTWLKDNVPIETIRTSQ-DTPS 674
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 33/308 (10%)
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
+ WR+ D + Q ++ + G+ +R + Y V+ N +G E+V
Sbjct: 1523 VEWRR-GDIKLQQKS--DIGSDNTLTLRNVQRTHEGNYSCHVK--NPLG---SDEIVYTL 1574
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPEETA 442
+ P P + + G + A+ + W + I+G L+ +R ++ W+E
Sbjct: 1575 QVQVPP--TPPTLIATGTTTDAVQLQWKQGDNGGAPIKGFLLAYRREFSEWEE------- 1625
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
L R N L+ GLQ T+Y + A+N G G S+ +T P PP+ +
Sbjct: 1626 -VMLDRKA-NTHLLEGLQCGTRYQFTLAAFNRIGSGSASKIETAKTNGTKP-IPPTKHQL 1682
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562
N T +T S P++ + + D ++++ P IV L
Sbjct: 1683 IKSNQT--FITLELTSWQDGGCPLLYFVAEYRRLPGDWLLVSNSVPPQSR---FPIVGLE 1737
Query: 563 PGKRYHMRVLAFSNGGDGRMS------SPAITFQMGEEKEFKSGSPALYSASTTLLLVMS 616
G +Y +RV A++N G + SP + ++ +E ++ +L+ + L M
Sbjct: 1738 SGTKYELRVTAYNNAGSTQAEYLFNTLSPTGSNRIHDEHPPETEETSLFFDAHVLAPSMI 1797
Query: 617 STLYIFVA 624
S +F+A
Sbjct: 1798 SLFAVFLA 1805
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
+ +G+L+I V D+G Y C+A+N G + + RL V S + Q P T+ +
Sbjct: 301 VVRDGSLIIQGVQESDAGSYMCSASNSEGSESMEVRLTVSAPLSVHVQ-PSIQTVDLGKA 359
Query: 99 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156
L CSA A W +G +R G + + I++ E D G
Sbjct: 360 AHLTCSA--SGFPQTALYWLKDGQPLRTGGR-IRAVSRERISVMAVARE-------DRGM 409
Query: 157 YECVVKS 163
Y+C V+S
Sbjct: 410 YQCFVRS 416
>gi|296230536|ref|XP_002760746.1| PREDICTED: neurofascin isoform 1 [Callithrix jacchus]
Length = 1240
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G ++G+ +KY
Sbjct: 844 EWD----HPEHPNGIMLGYTLKY 862
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 668 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P ++GY ++
Sbjct: 836 PNLETINLEWDH--PEHPNGIMLGYTLK 861
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|341891741|gb|EGT47676.1| hypothetical protein CAEBREN_11960 [Caenorhabditis brenneri]
Length = 1186
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 224/517 (43%), Gaps = 48/517 (9%)
Query: 8 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C+ +AAP+ W D + G+ K+F N +I V+ D G+Y C +N
Sbjct: 443 VILDCDVDAAPEAVVRWVDADDRPLQVVEGKNKLFPNHTFMIYDVNSADEGLYYCNVSNK 502
Query: 66 HGMDESKGRLIVLHGPSYYEQLP--PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
+G++ + RL V P+Y+ ++P ++ + A ++ C A + L + Y WT NG
Sbjct: 503 YGINRATNRLQVF-KPTYFVRIPTPKRLVLEAGETAEVFCEAVADPRLPIKYQWTINGKV 561
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ E+ I L + +G +C + V +IV+ P P
Sbjct: 562 LT-------ESQYYEILPDRLRFRSVRGRHSGIIDCAAITDVDVKLASMQLIVKDVPAHP 614
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST-WFNVSEHVIGKEVDRYTG 242
V+ + A I+W + +G I Y + T++ W VI +EV+
Sbjct: 615 V-VEAAHCSERKANIKWVAASDHGDSIKKYIVEMFTDFKKNEW-----EVINEEVN--VN 666
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGY------GEPSSPSPQYNTPADKPYQAPSRIGG 296
++ ++ L PW Y F+V+A N G G+P T PY P+ + G
Sbjct: 667 KENFEVDITLTPWVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKG 726
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
G + +L ISW+PL R NAPN+ Y + ++ +E L E ++R
Sbjct: 727 EGTEPDNLVISWKPLDRYYWNAPNMQYLVRYKLDEPIHGWTEFLVEDSLANYTIIRDQPT 786
Query: 357 FYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGV-FSRGFNSTAINVTWNPI 414
F +Y ++VQ++N VGP E E+ +S ED+P AP+ N T IN TWNP+
Sbjct: 787 F--RKYLIQVQSVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFRIDTQINFTTINFTWNPV 844
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + G +G+ I+YWK +N T R +++ + P Y + +++
Sbjct: 845 DA--NTVNGHFVGYEIEYWKAEN-----------TVRKYSIKI---PANSTYKIINSFHA 888
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
R + R AP P S +G P VH
Sbjct: 889 VTNYSAHIRTRNKRLRSAPSHPVSFAMPEG-PPGKVH 924
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 212/555 (38%), Gaps = 99/555 (17%)
Query: 5 GGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G +FC A P+ K+ W +G ++ +I + L V SGI C A
Sbjct: 534 GETAEVFCEAVADPRLPIKYQWTINGKVLTESQYYEILPD-RLRFRSVRGRHSGIIDCAA 592
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---RNLQLRCSAHTEE-------LLD 112
+ + +LIV P++ + AAH R ++ A ++ +++
Sbjct: 593 ITDVDVKLASMQLIVKDVPAH------PVVEAAHCSERKANIKWVAASDHGDSIKKYIVE 646
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + N + N ++N + N +D L N +F V ++ G+ K
Sbjct: 647 MFTDFKKNEWEVINEEVN-VNKENFEVDITLTPWVNYTF------RVVAVNSHGRSDMKI 699
Query: 173 T-------VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225
+ + P P T+ T +G + +K + R WN+
Sbjct: 700 DGQPKEDWLTCQTRPSFP---------YTNPTGVKGEGTEPDNLVISWKPLDRYYWNAP- 749
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWST---------YEFKVIAGNELGYGEPSSP 276
N+ V K + G E +E+ L ++ Y +V + N +G PS
Sbjct: 750 -NMQYLVRYKLDEPIHGWTEFLVEDSLANYTIIRDQPTFRKYLIQVQSVNSVG---PSIV 805
Query: 277 SPQYN---TPADKPYQAPS--RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKK 330
P+ + + D P +AP RI ++ +W P+ N + Y+I +W+ +
Sbjct: 806 EPEIHHGWSGEDVPDEAPRDFRIDTQIN-FTTINFTWNPVDANTVNGHFVGYEIEYWKAE 864
Query: 331 NDTEFQSETLKEYGNVGIAVVRIPSEFYY---------TEYEVKVQAINDVGPGPESEVV 381
N T+++Y ++IP+ Y T Y ++ N S V
Sbjct: 865 N-------TVRKYS------IKIPANSTYKIINSFHAVTNYSAHIRTRNKRLRSAPSHPV 911
Query: 382 TIFSAEDMP-QVAPQGVFSRGFNSTAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPE 439
+ E P +V V+S G STAI + W+ P++ GR+ G+ I + + D E
Sbjct: 912 SFAMPEGPPGKVHNLRVYSVG--STAILLQWDAPLQ-----PNGRIRGYFISF-QNDKNE 963
Query: 440 ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA 499
Y + R + + L +PDT Y V V A AGEGP + R + + P P
Sbjct: 964 TEETYVIHR--QKYYLHEKSEPDTGYKVSVWAETRAGEGPTTLRPVRTWPSRIPDAP--V 1019
Query: 500 VHIKGINPTTVHVTW 514
+K I + V W
Sbjct: 1020 FRVKNITLDSFVVEW 1034
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 16/266 (6%)
Query: 359 YTEYEVKVQAINDVGPG-------PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y +V A+N G P+ + +T + P P GV G + ++W
Sbjct: 679 WVNYTFRVVAVNSHGRSDMKIDGQPKEDWLTCQTRPSFPYTNPTGVKGEGTEPDNLVISW 738
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD-TKYYVKVM 470
P++ N + + ++Y K D P +L + I+ QP KY ++V
Sbjct: 739 KPLDRYYWNAPN--MQYLVRY-KLDEPIHGWTEFLVEDSLANYTIIRDQPTFRKYLIQVQ 795
Query: 471 AYNNAGEG-PESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIG 528
+ N+ G E E + + P + P I IN TT++ TW V + +G
Sbjct: 796 SVNSVGPSIVEPEIHHGWSGEDVPDEAPRDFRIDTQINFTTINFTWNPVDANTVNGHFVG 855
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
Y++ W+ + + R IP +T I Y + + S P ++
Sbjct: 856 YEIEYWKAENTV-RKYSIKIPANSTYKI-INSFHAVTNYSAHIRTRNKRLRSAPSHP-VS 912
Query: 589 FQMGEEKEFKSGSPALYSASTTLLLV 614
F M E K + +YS +T +L+
Sbjct: 913 FAMPEGPPGKVHNLRVYSVGSTAILL 938
>gi|344277018|ref|XP_003410302.1| PREDICTED: neurofascin-like isoform 3 [Loxodonta africana]
Length = 1239
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDKGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ L V P+ Q+P + +QL C + L + W + + +GN
Sbjct: 510 AENQVHLEV-KDPTRIYQMPEDQVVKRGTTVQLPCRVKHDPSLKLTVSWLKDDEPLYVGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LALLPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAAPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + NV +
Sbjct: 732 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRDTWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLQTINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 844 EWD----HPEHPNGILIGYTLKY 862
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 122/570 (21%), Positives = 208/570 (36%), Gaps = 99/570 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLMRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDKGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVE--VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230
+ V+ P + Q+ E V K T+Q K +W E
Sbjct: 515 HLEVKDPTRI---YQMPEDQVVKRGTTVQLP---------CRVKHDPSLKLTVSWLKDDE 562
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSS 275
+ Y G + ++ L + E + IA EL + ++
Sbjct: 563 PL-------YVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDQDLAKAHLTVLADQAT 615
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKK 330
P+ N A P P R ++ DL+ ++W +P + N+P Y + +
Sbjct: 616 PT---NRLALLPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE-- 666
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+++ Y Y+ +V AIN+VG P SE
Sbjct: 667 -EDQFQPGVWHDHSKFPGSVNSAVLQLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 722
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 723 SGA--APESNPADVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRD 774
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE + + + P P +
Sbjct: 775 TWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRV 833
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+ N T+++ W + P +IGY ++
Sbjct: 834 RQPNLQTINLEWDH--PEHPNGILIGYTLK 861
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ +S +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPS--HKAKFENFNKALRITNISEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|345797904|ref|XP_856244.2| PREDICTED: neurofascin isoform 8 [Canis lupus familiaris]
Length = 1236
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 199/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G ++I L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAILQ-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ + G G + ++ I+W P+ PN+ Y + WR++ ET + + N +
Sbjct: 732 ADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNATVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ +KY
Sbjct: 844 EWD----HPEHPNGILIGYTLKY 862
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GTDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|387539242|gb|AFJ70248.1| neurofascin isoform 1 precursor [Macaca mulatta]
Length = 1238
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 198/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G + G+ +KY
Sbjct: 844 EWD----HPEHPNGIMTGYTLKY 862
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 206/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+R+ Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPGDVKGEGTRKNNMEITWTPMNATS------AFGPNLRYIVKWRRRETREAW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P + GY ++
Sbjct: 836 PNLETINLEWDH--PEHPNGIMTGYTLK 861
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>gi|432894169|ref|XP_004075939.1| PREDICTED: Down syndrome cell adhesion molecule-like [Oryzias
latipes]
Length = 2118
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 236/529 (44%), Gaps = 39/529 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDS 55
G VT+ C+ E P P VW+ ++ SG R ++ NG+LLI V DDS
Sbjct: 786 GKTVTLNCSAEGYPPPTIVWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDS 845
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C +N G D SK + + P+ P ++ C AH E+ + V +
Sbjct: 846 GFYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRW 905
Query: 116 IWTHNGVRIGN-------MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
RI N + + E+ I+ L I D+G + C ++ G+
Sbjct: 906 ---EKEERIINPETSRYVVTVKEVADEVIST----LVIMPTVREDSGFFSCHAINSFGED 958
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ V+ PP P V++ EV + ++WT G PIT Y I + N +++W +
Sbjct: 959 RGIIQLTVQEPPD-PPVVEIREVKDRTIALRWTMGFDGNSPITGYDIECK-NKSASWLSA 1016
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ K+V +A+I + L P STY ++IA N +G PS+ T P
Sbjct: 1017 Q---VTKDVSPQL--NQATIID-LHPSSTYNIRMIAKNIIGNSNPSN-ELTITTDEAAPD 1069
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGN 345
P + + +SW+P + QN +++ +R+ + +F ++ G+
Sbjct: 1070 GPPQDVTLDSTSPQSIKVSWKPPLKHLQNGVIRGFQVGYREYSPGGSHQFTIISVDTTGD 1129
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
++V + + +T+Y V VQA N G GP S+ V + + ED+P P+ V + +
Sbjct: 1130 TTESIV-LDNLKKFTQYSVVVQAANRAGTGPSSQQVVVKTLEDVPSRPPENVLAVAKSPE 1188
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
I+++W P L RE + G L G+R+ YW E T + + L+ T Y
Sbjct: 1189 IISLSWMP--LPREALNGNLQGYRVIYWANLPDGELGEIRNVTTGQPSLELDSLEKYTNY 1246
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
++V+A+ NAG+G SE+ RT P PP+ V + + V V+W
Sbjct: 1247 SIQVLAFTNAGDGVRSEQIYVRTKEDVP-GPPAGVKAAASSSSAVFVSW 1294
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 146/599 (24%), Positives = 237/599 (39%), Gaps = 54/599 (9%)
Query: 5 GGNVTIFCNPEAAPKP-KFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSC 60
G V I C + +P W+KDG I + I +L IS ++ D +G Y+C
Sbjct: 692 GQRVFIPCVVMSGDRPLDITWQKDGRPIPASLGVTVDNIDFTSSLRISNLTPDHNGNYTC 751
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N + E + +LIV P + Q + I + + L CSA E +W H+
Sbjct: 752 IARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYG-KTVTLNCSA--EGYPPPTIVWEHS 808
Query: 121 ---GV-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
GV + + LN + +G LL I + D+G Y C V + VG +K+ +
Sbjct: 809 KGAGVPQFQPILLNSGSRIQLLSNGSLL-IKHVLEDDSGFYLCKVSNDVGADVSKSMYLT 867
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P + + T+ Q + + I H + W E +I E
Sbjct: 868 VKIPAM-----ITSYPNTTLATQGEEKRMSC--IAHGEKPIMVRWEK-----EERIINPE 915
Query: 237 VDRYT-GRKEASIE--NVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPADKPY 288
RY KE + E + LV T F A N G P D P
Sbjct: 916 TSRYVVTVKEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDR-GIIQLTVQEPPDPPV 974
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG---N 345
++ D +I+ N+P Y I + K+ + ++ K+ N
Sbjct: 975 VEIR-------EVKDRTIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLN 1027
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ PS + Y +++ A N +G S +TI + E P PQ V +
Sbjct: 1028 QATIIDLHPS----STYNIRMIAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLDSTSPQ 1083
Query: 406 AINVTWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV-GLQPD 462
+I V+W P +N IRG +G+R +Y + + T + + ++++ L+
Sbjct: 1084 SIKVSWKPPLKHLQNGVIRGFQVGYR-EYSPGGSHQFTIISVDTTGDTTESIVLDNLKKF 1142
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y V V A N AG GP S++ + +T P +PP V +P + ++W +
Sbjct: 1143 TQYSVVVQAANRAGTGPSSQQVVVKTLEDVPSRPPENVLAVAKSPEIISLSWMPLPREAL 1202
Query: 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGN-TLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY+V W D + G +L+ D L Y ++VLAF+N GDG
Sbjct: 1203 NGNLQGYRVIYWANLPDGELGEIRNVTTGQPSLELD--SLEKYTNYSIQVLAFTNAGDG 1259
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 192/512 (37%), Gaps = 73/512 (14%)
Query: 19 KPKFV-WKKDGNIIGSGGRRKIFEN--------GNLLISPVSRDDSGIYSCTATNVHGMD 69
KP V W+K+ II R + L+I P R+DSG +SC A N G D
Sbjct: 899 KPIMVRWEKEERIINPETSRYVVTVKEVADEVISTLVIMPTVREDSGFFSCHAINSFGED 958
Query: 70 ESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+L V P PP + I R + LR + D T + N
Sbjct: 959 RGIIQLTVQEPPD-----PPVVEIREVKDRTIALRWTMG----FDGNSPITGYDIECKNK 1009
Query: 128 D---LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVE--GPP 180
L+ T +++ I + + + K+ +G S + T+ + P
Sbjct: 1010 SASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIRMIAKNIIGNSNPSNELTITTDEAAPD 1069
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV---------SEH 231
G P V + S + W P+ H + N F V S
Sbjct: 1070 GPPQDVTLDSTSPQSIKVSWKP------PLKHLQ-----NGVIRGFQVGYREYSPGGSHQ 1118
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
VD E+ + + L ++ Y V A N G G PSS T D P + P
Sbjct: 1119 FTIISVDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTG-PSSQQVVVKTLEDVPSRPP 1177
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNI--YYKIFWRKKNDTEFQSETLKEYGNV--G 347
+ +S+SW PLPRE N N+ Y I+W D E L E NV G
Sbjct: 1178 ENVLAVAKSPEIISLSWMPLPREALNG-NLQGYRVIYWANLPDGE-----LGEIRNVTTG 1231
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAI 407
+ + S YT Y ++V A + G G SE + + + ED+P P GV + +S+A+
Sbjct: 1232 QPSLELDSLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPG-PPAGVKAAASSSSAV 1290
Query: 408 NVTWNPIELIRENIRGRLIG----HRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
V+W P + IR ++ H + + + + Y + RN
Sbjct: 1291 FVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDIYFYRIPNLARN----------R 1340
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495
+Y + V+A AG G SE+ KAP +
Sbjct: 1341 QYSIWVVAVTAAGHGNNSEKITVEPLAKAPAR 1372
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 16/179 (8%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V + C P PK+ W KD + + R + +G LLI DSG Y C N +G
Sbjct: 325 VELPCKASGYPTPKYRWLKDNSPLEPDSRFRQTISG-LLIESTQPSDSGTYVCEVWNSYG 383
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--- 124
E G L + P P K+ + + L CS + +++ W NG I
Sbjct: 384 NAEVVGHLYIKQ-PLKVVVSPRKVKGSVGSKVSLSCSVSGSDEYELS--WYRNGEIIYPG 440
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
N+ L N+ ++G S +D G Y+C + GK+S + V V G P
Sbjct: 441 NNVRFTGLNRENLIMEG-------MSKSDGGAYQCFARK--GKMSAQDFVQVILEDGTP 490
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGS------GGRRKIFENGNLLISPVSRDDSGIYSC 60
++ + C P P W K GN G+ GRR + NG+ +I V +DSG YSC
Sbjct: 1387 DIVVPCKAVGDPPPTIKWVK-GNTNGTPTPVVVDGRRSLHGNGSFIIRTVKAEDSGNYSC 1445
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPP 89
ATN G DE L V Q+PP
Sbjct: 1446 VATNTWGSDEVTLNLQV--------QVPP 1466
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FEN------GNLLISPVSRDDSGIYS 59
V + CN + P P+ W D + + + +E L ++ D G+Y
Sbjct: 507 VFLVCNVKGTPPPRCTWTLDDDPVIKDSHHHLGHYETHEAHVASQLNVTHTQVQDGGVYR 566
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CT +N G+ + R+ V S IT A R+ + C + + + +
Sbjct: 567 CTCSNSAGVVYHQARINVRGRASIRPM--KNITAIAGRDAFVHCRVIGYPYYSIKW-YKN 623
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT-VIVEG 178
+ + N E + G L+++N DAGEY C V K+ +++ V V
Sbjct: 624 SALLPFNHRQRAFE------NNGTLKLSNVQQVDAGEYTCKVMVQPNKMDSQSVHVRVRV 677
Query: 179 PP 180
PP
Sbjct: 678 PP 679
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 18/183 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTAT 63
G + + C P W K+ ++ R++ FE NG L +S V + D+G Y+C
Sbjct: 601 GRDAFVHCRVIGYPYYSIKWYKNSALLPFNHRQRAFENNGTLKLSNVQQVDAGEYTCKVM 660
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY------IW 117
+S+ + + P Y + + R + LD+ + I
Sbjct: 661 VQPNKMDSQSVHVRVRVPPYIQPFEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIP 720
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
GV + N+D L I+N + G Y C+ ++ + ++ +IV
Sbjct: 721 ASLGVTVDNIDFT-----------SSLRISNLTPDHNGNYTCIARNEAAVVEHQSQLIVR 769
Query: 178 GPP 180
PP
Sbjct: 770 VPP 772
>gi|402900942|ref|XP_003913419.1| PREDICTED: protein sidekick-2-like, partial [Papio anubis]
Length = 1482
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 231/541 (42%), Gaps = 51/541 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 416 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 475
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V YIW
Sbjct: 476 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVSHDPRVTVRYIWEK 534
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G ++ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 535 DGATLG-VESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 589
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W V+
Sbjct: 590 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLLRYVLEMSEN-NAPW-----TVLLAS 643
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 644 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 700
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 701 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 760
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 761 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 815
Query: 414 -----IELIRENIR-------------GRLIGHRIKYWKEDNPEETAV-YYLSRTTRNWA 454
I I + + G L G+RI W+E N T V +YL T +
Sbjct: 816 PSPQFINGINQGYKXXXXXXXXPGEKNGILTGYRIS-WEEYNRTNTRVTHYLPNVTLEYR 874
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL T Y ++V A + G+G S + PP+ + I I P +V + +
Sbjct: 875 -VTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISNIGPRSVTLQF 933
Query: 515 R 515
R
Sbjct: 934 R 934
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 22/281 (7%)
Query: 260 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA- 318
F++ N +G PS PS + T P AP+ + L + W PLP + N
Sbjct: 983 FRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGN 1042
Query: 319 -PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAIND 371
++ YKI K + ++ +TL + R+ E+ +TEY V+VQA N
Sbjct: 1043 PESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNA 1094
Query: 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431
+G GP S+ V + E +P P V + S+++ V W+ E+ + G ++G+++
Sbjct: 1095 IGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEADRNGLVLGYKVI 1152
Query: 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYR 490
Y ++D+ + + + + A + GL Y V+V+A+ G+G P LERT
Sbjct: 1153 YKEKDSDAQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLD 1212
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1213 DVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1250
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 365 KVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
+++ +N VG P S+ I + + P +AP V R + T++ + W P+ + N
Sbjct: 984 RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNP 1043
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
+G++IKY + D +T + + I L+ T+Y V+V A+N G GP S+
Sbjct: 1044 ESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQT 1103
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
+ RT P P+ V +++ V W V + ++GYKV E D D ++
Sbjct: 1104 VVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEKDSD-AQP 1162
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1163 RFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1206
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 362 YEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y+ ++ A+NDVG G ++E V++ E+ P PQ V + G + +I + W P
Sbjct: 662 YQFRLCAVNDVGKGQFSKDTERVSL--PEEPPTAPPQNVIASGRTNQSIMIQWQPPPESH 719
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+N G L G+ I+Y P ++ N L+ L T Y ++V AYN+AG G
Sbjct: 720 QN--GILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 777
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF----------------- 521
S + E T + P PP VH + N TT+ TW SP F
Sbjct: 778 VYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKXXXXXXXX 837
Query: 522 --EEEPII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
E+ I+ GY++ E ++ +R + V TL+ + L+ Y + V A ++ G
Sbjct: 838 PGEKNGILTGYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKG 895
Query: 579 DGRMSSPAIT 588
G++S+ I+
Sbjct: 896 QGQVSASTIS 905
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1006 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1063
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1064 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1115
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1116 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1174
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1175 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1232
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1233 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1288
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1289 ITAQTRKGWGDAAEALVVTTEKRDRPQPPSRPVVQQEDVRARSVLLSWEPGSDGL--SPV 1346
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1347 RYYTIQTRELPS--GRWTLHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1398
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 109/282 (38%), Gaps = 38/282 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIHAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELL 111
N D + I L GP+ + PP + +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLAVENVGGPADLIRTPPSSSPPKNTRVVAGTSEVTLECVANARPLI 246
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKI 168
+ IW +G+ L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 KLHIIWKKDGM---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSV 297
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ V PP V+ E H T+ + D + + I TW+
Sbjct: 298 VRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKD 346
Query: 229 SEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNAAG 388
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 327 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNA 386
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 387 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 442
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 -LASGSVQLPRFTPLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 493
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R W +VS +
Sbjct: 1316 PPSRPV-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWTLHSASVSHNASS 1374
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1375 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1422
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG 347
+ I W+P +K N + ++I +R+ + TL+ N G
Sbjct: 1423 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPG 1475
>gi|1842429|gb|AAB47754.1| ankyrin binding cell adhesion molecule neurofascin [Rattus
norvegicus]
Length = 1217
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 202/444 (45%), Gaps = 55/444 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG +++NG+L I + ++D GIY+C ATN+ G
Sbjct: 428 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYQNGSLEIKMIRKEDQGIYTCVATNILGK 485
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 486 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 544
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 545 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 595
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 596 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 649
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 650 -VLHDHSKFPGSVNSAVLH-LSPYVNYDFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 707
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNI-YYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
S + G G + ++ I+W P+ PN+ YY + WR++ ET + + NV +
Sbjct: 708 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYYIVKWRRR-------ETRETWNNVTVWG 760
Query: 351 VR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN
Sbjct: 761 SRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPS-APRRFRVRQPNLETIN 819
Query: 409 VTWNPIELIRENIRGRLIGHRIKY 432
+ W+ E+ G LIG+ ++Y
Sbjct: 820 LEWD----HPEHPNGILIGYTLRY 839
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 122/568 (21%), Positives = 209/568 (36%), Gaps = 94/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 327 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 384
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 385 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 435
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D G LEI D G Y CV + +GK +
Sbjct: 436 PTLRWFKNG-QGSNLDGGNYHV----YQNGSLEIKMIRKEDQGIYTCVATNILGKAENQV 490
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 491 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 540
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 541 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 593
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 594 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFEED-- 644
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ L ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 645 -QFQPGVLHDHSKFPGSVNSAVLHLSP---YVNYDFRVIAVNEVGSSHPSLPSERYRTSG 700
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ + G + + I W+ ET +
Sbjct: 701 AP--PESNPSDVKGEGTRKNNMEITWTPMNAT--SAFGPNLRYYIVKWRRRETRET---W 753
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 754 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSA-PRRFRVRQ 812
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 813 PNLETINLEWDH--PEHPNGILIGYTLR 838
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 237 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 294
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 295 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 351
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 352 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 407
Query: 182 L 182
+
Sbjct: 408 M 408
>gi|332257801|ref|XP_003277993.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Nomascus
leucogenys]
Length = 2164
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 235/556 (42%), Gaps = 37/556 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 437 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 496
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 497 CYAANTEGSLNASAMLTVWNRTSIIHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 555
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 556 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIVSEGGNDSRMARLEVIEL 611
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + H + + W PI +Y + N NS W V +G E+
Sbjct: 612 PHSPQNLLASPKSSHSHAVVLSWVRPFDGNSPILYYVVELSEN-NSPW-KVHLSNVGPEM 669
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 670 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 722
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 723 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 779
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 780 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 838
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 839 -QQFINGINQGYKLLAWLADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 897
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 898 PGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 952
Query: 533 VWEV-DQDMSRANDTI 547
WEV ++ SR T+
Sbjct: 953 -WEVYGRNDSRLTHTL 967
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 152/609 (24%), Positives = 227/609 (37%), Gaps = 71/609 (11%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I +S +DSGI+ C A+N
Sbjct: 347 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLSPEDSGIFQCFASN 406
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 407 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 466
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
VRI L ++ G L+I DAG Y C +T G ++ + V
Sbjct: 467 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAMLTVWNR 517
Query: 180 PGL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
+ P VV + T+AT+ GAT+ ++ + + N T + S V+ K+
Sbjct: 518 TSIIHPPEDHVV-IKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG 574
Query: 238 DRYTGRKEASIENVLVPWS------TYEFKVIAGNELGYGE------PSSPSPQYNTPAD 285
+ WS T E GN+ P SP +P
Sbjct: 575 SLLISQT----------WSGDIGDYTCEIVSEGGNDSRMARLEVIELPHSPQNLLASPKS 624
Query: 286 KPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
A + +SW P N+P +YY + + N S
Sbjct: 625 SHSHA-------------VVLSWVRPF---DGNSPILYYVVELSENN-----SPWKVHLS 663
Query: 345 NVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
NVG + V + Y+ +V A+N+VG G S E + E+ P P+ + + G
Sbjct: 664 NVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVASG 723
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +I V W P N G L G+ ++Y P E ++ N+ L+ L
Sbjct: 724 RTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLII 781
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y ++V AYN AG G S E T + P PP V + +N TT+ W F
Sbjct: 782 WTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQF 841
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GYK+ W D + TI P I +L Y VL F+ GDG
Sbjct: 842 INGINQGYKLLAWLADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDG 901
Query: 581 RMSSPAITF 589
S+P + +
Sbjct: 902 PPSTPQLVW 910
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1436 VPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACVVDR-- 1493
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1494 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1543
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGN 345
+ I W+P E N Y+I++R+ + + +++TLK +
Sbjct: 1544 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKSPIALRAELTAQSSFKT 1603
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1604 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1663
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1664 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVKLKNLTS 1721
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1722 HTKYLVSISAFNAAGDGPRSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1778
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1779 ANGILQGYRV 1788
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINV 409
+ IP+ YT Y +++ +N VGP P S+ + + + P VAP V R + T++ +
Sbjct: 1084 LEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPTSVTVRTASETSLRL 1143
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P++ + N +G+RIKYW+ D +S I L+ +Y +++
Sbjct: 1144 RWVPLQDSQYNGNPESVGYRIKYWRSDLQSSALAQVVSDRLEREFTIEELEEWMEYELQM 1203
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP SE RT P P V + ++ T + +TW V + I+GY
Sbjct: 1204 QAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGY 1263
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
K+ D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1264 KILFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1320
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 181/422 (42%), Gaps = 51/422 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE--- 236
PG P + + + SAT+Q+ G I+ + + + IG E
Sbjct: 1021 PGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------AIGDEEEW 1069
Query: 237 VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
V Y E + + L P++ Y F++ N +G S S T P AP+
Sbjct: 1070 VTLYEEENEPDAQTLEIPNLTPYTHYRFRMKQVNIVGPSPYSQSSRVIQTLQAPPDVAPT 1129
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIA 349
+ L + W PL + N ++ Y+I +WR ++ QS L + +
Sbjct: 1130 SVTVRTASETSLRLRWVPLQDSQYNGNPESVGYRIKYWR----SDLQSSALAQ-----VV 1180
Query: 350 VVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
R+ EF + EYE+++QA N VG GP SEVV + E +P AP+ V + +
Sbjct: 1181 SDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVS 1240
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
ST I +TW + +N G ++G++I + +D E + + AL+ GL+
Sbjct: 1241 STQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLRKFV 1298
Query: 464 KYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
Y ++V+A+ G G P + LERT AP PP + + T+V + W+
Sbjct: 1299 LYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP-----P 1352
Query: 523 EEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGG 578
EEP I+GY++ S T + VG T+ DL+P Y R+ A + G
Sbjct: 1353 EEPNGIILGYQIXYRLASS--SPHTFTTVEVGATVRQFTATDLAPESAYIFRLSAKTRQG 1410
Query: 579 DG 580
G
Sbjct: 1411 WG 1412
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 192/487 (39%), Gaps = 49/487 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1301 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1360
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1361 GYQIXYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1412
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1413 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLQLQWVPGSDGASPIRYFTVQVRELP 1471
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1472 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1529
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-------------- 436
P V + ++++ + W P E++ G L G+RI Y + +
Sbjct: 1530 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEYEAGSGTEAKTLKS 1587
Query: 437 ----NPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERT 488
E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1588 PIALRAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFV 1647
Query: 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII 548
AP P V + + + + VTW P + I GYK+ WE D ++
Sbjct: 1648 GEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVL 1707
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS-- 606
+ + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1708 FLPEPV-VKLKNLTSHTKYLVSISAFNAAGDGPRSDP----QQGRTHQAAPGAPSFLAFS 1762
Query: 607 --ASTTL 611
STTL
Sbjct: 1763 EITSTTL 1769
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 31/426 (7%)
Query: 169 STKTTVIVEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWN 222
S++ ++ PP + P V V +TS ++W D NG P + Y+I R++
Sbjct: 1113 SSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLQDSQYNGNPESVGYRIKYWRSDLQ 1172
Query: 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282
S+ V+ ++R E +IE + YE ++ A N +G G P S + T
Sbjct: 1173 SSAL---AQVVSDRLER-----EFTIEELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRT 1222
Query: 283 PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLK 341
P AP + + ++W +P + QN + YKI +R K+ D E +S ++
Sbjct: 1223 RESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR 1282
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSR 400
GN + + + + YE++V A +G G P + ++ + +D P + VF
Sbjct: 1283 --GNHTQSAL-LAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE 1339
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYLSRTTRNWALIVGL 459
T++ + W P E G ++G++I Y +P + T R + L
Sbjct: 1340 -VRLTSVRIVWQP----PEEPNGIILGYQIXYRLASSSPHTFTTVEVGATVRQFT-ATDL 1393
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
P++ Y ++ A G G E + T ++ PP + + T + ++V
Sbjct: 1394 APESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLQLQWVPG 1453
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGG 578
S PI + V+V E+ + + + I + A +VD L P Y +R+ A ++ G
Sbjct: 1454 SDGASPIRYFTVQVRELPRGEWQTYSSSI--SHEATACVVDRLRPFTSYKLRLKATNDIG 1511
Query: 579 DGRMSS 584
D SS
Sbjct: 1512 DSDFSS 1517
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G + P T Y I AR + W + K+
Sbjct: 1851 EGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVKD 1904
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S+ L TYEF+V+A NE GYGEPSSPS + + P+
Sbjct: 1905 IPRSATSYTLSLAK-LRQGVTYEFRVVAVNEAGYGEPSSPSTAVSAQVEAPF 1955
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + DSG Y A N + I
Sbjct: 163 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDSGAYYVQAVNEKNGENKTSPFIH 222
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A+ + D++ W NGVRI
Sbjct: 223 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIANARPVEDLSVTWKRNGVRI-- 280
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 281 -------TSGLHSFGRRLTISNPTSADTGPYVC 306
>gi|270009930|gb|EFA06378.1| hypothetical protein TcasGA2_TC009254 [Tribolium castaneum]
Length = 1348
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 146/552 (26%), Positives = 237/552 (42%), Gaps = 53/552 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNLLISPVSRDDSGI 57
G T+ C + PKP WKK + +FE NG+L +S+++ G
Sbjct: 118 GQEATMHCQADGYPKPAVTWKKAVGEQPGEYKDFLFEPNVQQFPNGSLNFLHISKENEGQ 177
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A N G SK + ++ P+++ Q ++ + L+CSA + +++ W
Sbjct: 178 YLCEAKNNIGAGVSKVIFLKVNAPAHFLQKSKQLQVVKGEQAHLQCSALGDTPMEIT--W 235
Query: 118 THNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTV 174
G I N + G+ L I D G + C + G +
Sbjct: 236 KLGGQHISNDGDQRYSVRAQQLAEGMVSELSIERTIRQDTGIFTCSASNAYGSDDMNIQL 295
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
IV+ P P V+V++ S I WT PIT+Y I+ + W N V
Sbjct: 296 IVQEIPEPPRNVRVMDQLSRSIGISWTQPYAGNSPITNY-IVQYKPGSEAWPNQPAKVT- 353
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
G + + L P Y +++A N LG +PS Q +T + P AP I
Sbjct: 354 -----VPGSQITTTLQNLRPAQVYHLRILAENRLGLSDPSQVV-QVSTLEEVPSGAPVDI 407
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK----KNDTEFQSETLK------EYG 344
+L ++WEP RE N + Y + +++ ++ QS T K YG
Sbjct: 408 RAEAKSSTELVVTWEPPNRETWNGNLLGYHVGYQEVSTEDSNNVAQSYTFKSVEVRPHYG 467
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
G AV++ S+ YT Y + VQA N G GP S+ VT + ED P + P V ++
Sbjct: 468 --GEAVLQGLSK--YTTYGIIVQAYNSRGSGPASDPVTARTLEDAPSLPPLNVQCSVLSA 523
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKY-----WKEDNPEETAVYYLSRTTRNWALIVGL 459
+++++W P + E G + G+++ Y W +++ ++T + RTT I GL
Sbjct: 524 QSLHISWEPP--LPEGRNGIIQGYKVTYHSAGEWFDNDDQQTKIINQLRTT-----ISGL 576
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYV 517
+ T Y + V+AY ++G+G SE +T P P IK + P + V+W +
Sbjct: 577 RKFTNYSMTVLAYTSSGDGARSEPTYCQTEEDVPSAP---AEIKAVLSAPDKILVSW--L 631
Query: 518 SPSFEEEPIIGY 529
P F P++GY
Sbjct: 632 PPKFSNGPLVGY 643
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 150/623 (24%), Positives = 250/623 (40%), Gaps = 67/623 (10%)
Query: 4 EGGNVTIFCNPEAAPKP-KFVWKKDGNII------GSGGRRKIFENGNLLISPVSRDDSG 56
EG I C P F W+++ + G+ RR + +L+I V+ SG
Sbjct: 20 EGMRAAITCQIMEGDLPITFRWERNAKAVSNNVALGTVIRRIDEFSSSLIIEQVTSAHSG 79
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
Y+C A+NV G ++ L V + P + P ++AA + + C A + A
Sbjct: 80 NYTCIASNVAGAEKHVVPLTV-NVPPRWTVEPADSSVAAGQEATMHCQA--DGYPKPAVT 136
Query: 117 WTHN-GVRIGNMDLNELETPNI-NIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
W G + G + L PN+ G L + S + G+Y C K+ +G +K
Sbjct: 137 WKKAVGEQPGEYK-DFLFEPNVQQFPNGSLNFLHISKENEGQYLCEAKNNIGAGVSKVIF 195
Query: 175 IVEGPPG--LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ P L Q+ V A +Q + + T TW +H+
Sbjct: 196 LKVNAPAHFLQKSKQLQVVKGEQAHLQCS-------------ALGDTPMEITWKLGGQHI 242
Query: 233 IGKEVDRYTGRKEASIENVLVPWS--------TYEFKVIAGNELGYGEPSSPSPQYNTPA 284
RY+ R + E ++ S T F A N G + + P
Sbjct: 243 SNDGDQRYSVRAQQLAEGMVSELSIERTIRQDTGIFTCSASNAYGSDDMNIQLIVQEIP- 301
Query: 285 DKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKE 342
+ P + + ISW +P N+P Y + ++ ++ Q +
Sbjct: 302 ----EPPRNVRVMDQLSRSIGISWTQPY---AGNSPITNYIVQYKPGSEAWPNQPAKVTV 354
Query: 343 YGNVGIAVVR--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
G+ ++ P++ Y+ +++ A N +G S+VV + + E++P AP + +
Sbjct: 355 PGSQITTTLQNLRPAQVYH----LRILAENRLGLSDPSQVVQVSTLEEVPSGAPVDIRAE 410
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------- 453
+ST + VTW P RE G L+G+ + Y +E + E++ S T ++
Sbjct: 411 AKSSTELVVTWEPPN--RETWNGNLLGYHVGY-QEVSTEDSNNVAQSYTFKSVEVRPHYG 467
Query: 454 --ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
A++ GL T Y + V AYN+ G GP S+ RT AP PP V ++ ++H
Sbjct: 468 GEAVLQGLSKYTTYGIIVQAYNSRGSGPASDPVTARTLEDAPSLPPLNVQCSVLSAQSLH 527
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
++W P I GYKV + + +D + N L I L Y M V
Sbjct: 528 ISWEPPLPEGRNGIIQGYKV-TYHSAGEWFDNDDQQTKIINQLRTTISGLRKFTNYSMTV 586
Query: 572 LAFSNGGDGRMSSPAITFQMGEE 594
LA+++ GDG S P T+ EE
Sbjct: 587 LAYTSSGDGARSEP--TYCQTEE 607
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 109/279 (39%), Gaps = 39/279 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV + C P P +W+ + + GGR+ IF N L+I D YSC+ N +
Sbjct: 726 NVYLHCKRVGIPLPNAIWRVNDLPLEVGGRKTIFPNATLVIKDTQSVDQANYSCSVENQY 785
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAH---TEELLD--VAYIWTH 119
G DE + L VL P P +++ A +L LR S +L + Y H
Sbjct: 786 GRDEIEYSLKVLVPPE-----APVLSVVEAFTDSLHLRWSDQGNGGSPILGYVINYKRDH 840
Query: 120 NGVRIGNMDLNELETPNINIDGG---LLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ E N+ G LL IT + G + + TK TV V
Sbjct: 841 GDWEELQISARTDEHMLRNLWCGTRYLLYITAFNRIGTG-----LPCDIVGAHTKGTVPV 895
Query: 177 EGPPGLPGGVQVVEVHKTSATI---QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ P Q++ ++ T TI W DG G I ++ I R +S W S HV
Sbjct: 896 K-----PKQSQMLTMNATVVTIWLDSWGDG---GCGILYFVIEFRPGKHSPWIMSSNHV- 946
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
K +R E L P + Y+ K+ A N G E
Sbjct: 947 -KPTERIYSISE------LWPATEYQLKITAHNNAGNTE 978
>gi|431918209|gb|ELK17437.1| Protein sidekick-1 [Pteropus alecto]
Length = 1357
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 222/527 (42%), Gaps = 47/527 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSC 60
G + C APKP W++ +++ SG R + E+G L ISPVS D+G Y+C
Sbjct: 146 GTTAVLRCGVSGAPKPAITWRRGNHVLASGSVRIPRFMLLESGGLQISPVSVQDAGDYTC 205
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
ATN G + L V + S ++ I L C A + + V Y+W +
Sbjct: 206 YATNAEGALNASATLTVWNRTSIVTPPEDRVVIKG-TTATLPCGATHDPRVSVRYVWKKD 264
Query: 121 GVRIGNMDLNELETPN------INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
N + TP+ + DG LL I+ D G+Y C V S G S +
Sbjct: 265 ---------NAILTPSSSSRAVVEKDGSLL-ISQTWSGDIGDYTCEVLSEGGNDSRAARL 314
Query: 175 IVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
V P P + ++ +AT+ W P+ HY + N NS W V
Sbjct: 315 EVIELPHPPQNLLARLSPPRSHAATLSWVRPFDGNSPVLHYVVELSEN-NSPW-KVHLPN 372
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G E T R L P TY+F+V A N++G G+ S+ + + P + P P
Sbjct: 373 VGPEKTGVTVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPK 425
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
I G + + W+P P + N Y++ + + + +
Sbjct: 426 NIVASGRTNQSIMVQWQPPPETEHNGALHGYRLAGLPGEHQQ------RNITSPEVNYCL 479
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T+YE++V A N G G S VT ++ + +P PQ V + NSTAI WN
Sbjct: 480 VTELIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTAIRFLWN 539
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVM 470
P ++ I G G+++ W D PE + ++ + I L+ T Y+ V+
Sbjct: 540 PPP--QQFINGINQGYKLLAWPADVPEAVTIVTIAPDFHGVHHGYITNLKKFTAYFTSVL 597
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWR 515
+ G+GP S L +T+ KP + H+ I T++ V+W+
Sbjct: 598 CFTTPGDGPPSMPQLIQTHED---KPGAVGHLSFTEILDTSLKVSWQ 641
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 100/236 (42%), Gaps = 9/236 (3%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 391 YQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 450
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+R+ P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 451 --GALHGYRLA----GLPGEHQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVF 504
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N T + W F GYK+ W D
Sbjct: 505 SRAVTEYTLQGVPTAPPQNVQAEAVNSTAIRFLWNPPPQQFINGINQGYKLLAWPADVPE 564
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595
+ TI P + + I +L Y VL F+ GDG S P + Q E+K
Sbjct: 565 AVTIVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPPSMPQL-IQTHEDK 619
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C+ AP P W KD IG+ G R ++ G L I + DDSGI+ C A+N
Sbjct: 55 TVDIVCHAMGAPPPTLRWYKDAVPIGTLQGPRYRVLPGGGLRIQQLRPDDSGIFQCFASN 114
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + +LP T+ LRC + ++
Sbjct: 115 DGGEIQTHTYLAVTNVAPAFTRLPVDTTVTNGTTAVLRCGVSGAPKPAITWRRGNHVLAS 174
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I+ S DAG+Y C + G ++ T+ V
Sbjct: 175 GSVRIPRFML---------LESGGLQISPVSVQDAGDYTCYATNAEGALNASATLTV 222
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 40/261 (15%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP+ YT Y +++ +N VG P S+ + + + P VAP V R + T++
Sbjct: 784 MLEIPNLTPYTHYRFRMRQVNVVGASPASQSSRVIQTLQAPPDVAPTSVAVRTASETSLR 843
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYY--LSR---------------- 448
+ W P+ + N +G+R+KYW+ D +P V + L R
Sbjct: 844 LRWVPLPDSQYNGNPESVGYRVKYWRPDLQSPARAHVVHGRLERECAIEELEEWTEYELQ 903
Query: 449 ----TTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIK 503
AL+ GL+ Y ++V A+ G G P S L RT PP +
Sbjct: 904 LQAFNASQSALLAGLRKFVLYELQVQAFTRIGAGVPSSPPALARTQDDG---PPVRLVFP 960
Query: 504 GINPTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIV 559
+ ++V + W+ EEP I+GY+V S T + VG T+
Sbjct: 961 EVRLSSVRIVWQP-----PEEPNGVILGYQVAYRLASS--SPNTFTTVEVGATVRQFTAT 1013
Query: 560 DLSPGKRYHMRVLAFSNGGDG 580
+L+P Y R+ A + G G
Sbjct: 1014 ELAPESAYIFRLSAKTRQGWG 1034
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 115/558 (20%), Positives = 203/558 (36%), Gaps = 106/558 (18%)
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+ G + RLIV+ PS LPP+ I R+
Sbjct: 650 ITGAEHDAPRLIVMPAPS---PLPPQTLIDEGRDAD------------------------ 682
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
G L+ L T I++ T + A AG ++T +T+ PP LPG
Sbjct: 683 GEFGLSSLTTYTIDV-------TAVTAAGAG------------LATSSTISSGVPPELPG 723
Query: 185 G---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE---VD 238
+ + + SAT+Q+ G I+ + + + IG E V
Sbjct: 724 APSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------AIGDEEEWVS 772
Query: 239 RYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y E + + L P++ Y F++ N +G S S T P AP+ +
Sbjct: 773 LYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNVVGASPASQSSRVIQTLQAPPDVAPTSV 832
Query: 295 GGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSET------------ 339
L + W PLP + N ++ Y++ +WR + ++
Sbjct: 833 AVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRPDLQSPARAHVVHGRLERECAIE 892
Query: 340 -----------LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAE 387
L+ + A++ +F YE++VQA +G G P S + +
Sbjct: 893 ELEEWTEYELQLQAFNASQSALLAGLRKFVL--YELQVQAFTRIGAGVPSSPPALARTQD 950
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKEDNPEETAVYYL 446
D P V + VF +++ + W P E G ++G+++ Y +P +
Sbjct: 951 DGPPV--RLVFPE-VRLSSVRIVWQP----PEEPNGVILGYQVAYRLASSSPNTFTTVEV 1003
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506
T R + L P++ Y ++ A G G E + T ++ PP + +
Sbjct: 1004 GATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAE 1062
Query: 507 PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566
T + ++V S PI + V+V E+ + + + G T + L P
Sbjct: 1063 VTARSLRLQWVPGSDGASPIRYFTVQVRELPGGQWQTYSSSVSHGATA-CTVERLRPFTS 1121
Query: 567 YHMRVLAFSNGGDGRMSS 584
Y +R+ A ++ GD S+
Sbjct: 1122 YKLRLKATNDIGDSEFSA 1139
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 30/226 (13%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V EV S +QW G+ PI ++ + R W S V G
Sbjct: 1058 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGQWQTYSSSV-------SHGATA 1110
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
++E L P+++Y+ ++ A N++G E S+ + T D P + PS + +
Sbjct: 1111 CTVER-LRPFTSYKLRLKATNDIGDSEFSAETEAVTTLQDVPGEPPSSVSVTPHTTSSVL 1169
Query: 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV-VRIPSEFY------ 358
I W+P E N Y+I++R+ D E S T + + A+ +P++
Sbjct: 1170 IQWQPPRDESLNGLLQGYRIYYREL-DYEAASATESKMLSTPSALRTELPAQSSFRTVNS 1228
Query: 359 --------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
Y YEV + A N +G P S V +F E P
Sbjct: 1229 SSALTTYELTHLKKYRRYEVVLTAYNIIGESPASTPVEVFVGEAGP 1274
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 29/267 (10%)
Query: 177 EGPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVI 233
+GPP V++V EV +S I W I Y++ R +S F E +
Sbjct: 951 DGPP-----VRLVFPEVRLSSVRIVWQPPEEPNGVILGYQVAYRLASSSPNTFTTVE--V 1003
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G V ++T + L P S Y F++ A G+GEP + ++P P
Sbjct: 1004 GATVRQFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRE 1055
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVR 352
+ ++ S+ + +P +P Y+ + R+ ++Q+ + +G V R
Sbjct: 1056 LLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGQWQTYSSSVSHGATACTVER 1115
Query: 353 IPSEFYYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +T Y+++++A ND+G E+E VT +D+P P V ++++ +
Sbjct: 1116 L---RPFTSYKLRLKATNDIGDSEFSAETEAVTTL--QDVPGEPPSSVSVTPHTTSSVLI 1170
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKED 436
W P E++ G L G+RI Y + D
Sbjct: 1171 QWQPPR--DESLNGLLQGYRIYYRELD 1195
>gi|34101310|gb|AAQ57662.1| sidekick 1 [Mus musculus]
gi|187951057|gb|AAI38454.1| Sidekick homolog 1 (chicken) [Mus musculus]
Length = 1933
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 250/597 (41%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 215 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 274
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N + L V + S ++ I L C A + + Y+W
Sbjct: 275 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 333
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 334 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 389
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S T+ W P+ +Y + N NS W V +G E+
Sbjct: 390 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 447
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 448 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 500
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 501 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 557
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST ++ WNP
Sbjct: 558 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPP- 616
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 617 -QQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTT 675
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P I+GY++
Sbjct: 676 PGDGPPSSPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLERNGIIMGYQIS 730
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G +S I+
Sbjct: 731 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSSTIS 784
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 236/605 (39%), Gaps = 69/605 (11%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C P P W KD + R K+ +G L I +S +DSGI+ C A+N G
Sbjct: 128 IPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGG 187
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGV 122
++ L V + + Q P T+ LRC + +I V
Sbjct: 188 EVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSV 247
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
RI L ++ G L I DAG Y C +T ++ + V +
Sbjct: 248 RIPRFML---------LESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSI 298
Query: 183 --PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +VV + T+AT+ GAT+ RT+ W + + R
Sbjct: 299 VHPPEDRVV-IKGTTATL--CCGATHD---------PRTSLRYVWKKDNVVITASSSSRI 346
Query: 241 TGRKEASIENVLVPWS----TYEFKVIAGNELGYGEPSS-------PSPQYNTPADKPYQ 289
K+ S+ + WS Y ++I+ E G ++ P P N A
Sbjct: 347 VVEKDGSLV-ISQTWSGDIGDYTCEIIS--EGGSDSRTARLEVIELPHPPQNLLASL--- 400
Query: 290 APSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG- 347
+P+R +++SW P N+P +YY I +N++ ++ NVG
Sbjct: 401 SPARSH-------SVTLSWVRPF---DGNSPVLYY-IVQVSENNSPWKVH----LSNVGP 445
Query: 348 -IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ V + Y+ +V A+N VG G S E + E+ P P+ + + G +
Sbjct: 446 EMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQ 505
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I V W P N G L G+ ++Y P E +S N+ L+ L T+Y
Sbjct: 506 SIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQY 563
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 564 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGI 623
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSS 584
GYK+ W D + TI P + + I +L Y VL F+ GDG SS
Sbjct: 624 NQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSS 683
Query: 585 PAITF 589
P + +
Sbjct: 684 PQLVW 688
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1207 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1264
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1265 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1314
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG--- 344
+ I W+P E N Y+I++R+ K+ + ++E +
Sbjct: 1315 SSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKT 1374
Query: 345 ---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1375 VNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTP 1434
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G+++ YW+ D+ ET + I L
Sbjct: 1435 LTASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDLTS 1492
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY + + A+N AG+GP+S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1493 HTKYLISISAFNAAGDGPKSDPCQGRTHQAAP-GPPSFLAFSEITSTTLNVSWG--EPSA 1549
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1550 ANGILQGYRV 1559
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 167/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + I Y+I +W N S H +
Sbjct: 691 EDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQI----SWEVYGRNDSRLTHTLN 746
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A G G +S + P D P APS +
Sbjct: 747 STTHEYKIQGLSSL-------TTYTIDVAALTAAGVGVTTSSTISSGVPPDLP-GAPSNL 798
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + D E +E ++ IP
Sbjct: 799 VISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 858
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 859 NLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVP 918
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P +S I L+ T+Y +++ A+N
Sbjct: 919 LPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVSDRLERELTIEELEEWTEYELRMQAFN 978
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 979 AIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLY 1038
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1039 CAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1091
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 184/431 (42%), Gaps = 42/431 (9%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 777 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 832
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 833 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 885
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 886 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 945
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
++ + + + I +TEYE+++QA N +G GP SE+V + E +P AP
Sbjct: 946 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAP 1002
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ V + +ST I +TW + +N G ++G+++ Y +D E + + A
Sbjct: 1003 ENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYCAKDLDPEPRSHVVRGNHTQSA 1060
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L+ GL+ Y ++V+A+ G G P S LERT P PP + + T V +
Sbjct: 1061 LLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPEVRLTAVRIV 1119
Query: 514 WRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHM 569
W+ EEP I+GY++ S T + VG T+ +L+P Y
Sbjct: 1120 WQP-----PEEPNGVILGYQIAYRLASG--SPHTFTTVEVGATVRQFTATELAPESAYIF 1172
Query: 570 RVLAFSNGGDG 580
R+ A + G G
Sbjct: 1173 RLSAKTRQGWG 1183
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 184/463 (39%), Gaps = 53/463 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1100 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1157
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1158 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1209
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1210 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1267
Query: 358 YYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1268 -FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPP 1324
Query: 415 ELIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + ++ E TA + +L
Sbjct: 1325 R--DESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLT 1382
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1383 TYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1442
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYKV WE D ++ + + I DL+ +Y + +
Sbjct: 1443 TWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLISIS 1501
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
AF+ GDG S P G + G P+ + STTL
Sbjct: 1502 AFNAAGDGPKSDPC----QGRTHQAAPGPPSFLAFSEITSTTL 1540
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1622 EGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAKD 1675
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1676 IPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1726
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 14/328 (4%)
Query: 260 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 319
++ A N +G G P S + T P AP + + ++W +P + QN
Sbjct: 972 LRMQAFNAIGAG-PWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGL 1030
Query: 320 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PE 377
+ YK+ + K+ D E +S ++ GN + + + + YE++V A +G G P
Sbjct: 1031 ILGYKVLYCAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVVYELQVLAFTRIGNGVPS 1087
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKED 436
S ++ + +D P + VF TA+ + W P E G ++G++I Y
Sbjct: 1088 SPLILERTKDDTPGPPVRLVFPE-VRLTAVRIVWQP----PEEPNGVILGYQIAYRLASG 1142
Query: 437 NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496
+P + T R + L P++ Y ++ A G G E + T ++ P
Sbjct: 1143 SPHTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAP 1201
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA 556
P + + T + ++V S PI + V+V E+ + + I T A
Sbjct: 1202 PRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACA 1261
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ L P Y +R+ A ++ GD S+
Sbjct: 1262 -VERLRPFTSYKLRLKATNDIGDSDFSA 1288
>gi|403294840|ref|XP_003938371.1| PREDICTED: neurofascin [Saimiri boliviensis boliviensis]
Length = 1316
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 198/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 529 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 586
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P + L C + L + W + + IGN
Sbjct: 587 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVHLECRVKHDPSLKLTVSWLKDDEPLYIGN 645
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 646 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 696
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 697 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 750
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 751 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 808
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 809 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 861
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 862 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPS-APRRFRVRQPNLETINL 920
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G ++G+ +KY
Sbjct: 921 EWD----HPEHPNGIMLGYTLKY 939
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 120/570 (21%), Positives = 206/570 (36%), Gaps = 99/570 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 428 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 485
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 486 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 536
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 537 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 591
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 592 RLEVKDPTRIYRMPEDQVAKRGTTVHLECRVKHDPSLKLTVSWL---KDDEPLYIGNRMK 648
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 649 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPK 702
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 703 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDDNNSPITDYVVQFE-- 743
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 744 -EDQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 799
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 800 SGAP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRE 851
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE E + + P P +
Sbjct: 852 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDLPSA-PRRFRV 910
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
+ N T+++ W + P ++GY ++
Sbjct: 911 RQPNLETINLEWDH--PEHPNGIMLGYTLK 938
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 338 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 395
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 396 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 452
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 453 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 508
Query: 182 L 182
+
Sbjct: 509 M 509
>gi|189238865|ref|XP_972891.2| PREDICTED: similar to AGAP007092-PA [Tribolium castaneum]
Length = 1918
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 146/552 (26%), Positives = 237/552 (42%), Gaps = 53/552 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-------NGNLLISPVSRDDSGI 57
G T+ C + PKP WKK + +FE NG+L +S+++ G
Sbjct: 728 GQEATMHCQADGYPKPAVTWKKAVGEQPGEYKDFLFEPNVQQFPNGSLNFLHISKENEGQ 787
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C A N G SK + ++ P+++ Q ++ + L+CSA + +++ W
Sbjct: 788 YLCEAKNNIGAGVSKVIFLKVNAPAHFLQKSKQLQVVKGEQAHLQCSALGDTPMEIT--W 845
Query: 118 THNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTV 174
G I N + G+ L I D G + C + G +
Sbjct: 846 KLGGQHISNDGDQRYSVRAQQLAEGMVSELSIERTIRQDTGIFTCSASNAYGSDDMNIQL 905
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
IV+ P P V+V++ S I WT PIT+Y I+ + W N V
Sbjct: 906 IVQEIPEPPRNVRVMDQLSRSIGISWTQPYAGNSPITNY-IVQYKPGSEAWPNQPAKVT- 963
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
G + + L P Y +++A N LG +PS Q +T + P AP I
Sbjct: 964 -----VPGSQITTTLQNLRPAQVYHLRILAENRLGLSDPSQVV-QVSTLEEVPSGAPVDI 1017
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK----KNDTEFQSETLK------EYG 344
+L ++WEP RE N + Y + +++ ++ QS T K YG
Sbjct: 1018 RAEAKSSTELVVTWEPPNRETWNGNLLGYHVGYQEVSTEDSNNVAQSYTFKSVEVRPHYG 1077
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
G AV++ S+ YT Y + VQA N G GP S+ VT + ED P + P V ++
Sbjct: 1078 --GEAVLQGLSK--YTTYGIIVQAYNSRGSGPASDPVTARTLEDAPSLPPLNVQCSVLSA 1133
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKY-----WKEDNPEETAVYYLSRTTRNWALIVGL 459
+++++W P + E G + G+++ Y W +++ ++T + RTT I GL
Sbjct: 1134 QSLHISWEPP--LPEGRNGIIQGYKVTYHSAGEWFDNDDQQTKIINQLRTT-----ISGL 1186
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYV 517
+ T Y + V+AY ++G+G SE +T P P IK + P + V+W +
Sbjct: 1187 RKFTNYSMTVLAYTSSGDGARSEPTYCQTEEDVPSAP---AEIKAVLSAPDKILVSW--L 1241
Query: 518 SPSFEEEPIIGY 529
P F P++GY
Sbjct: 1242 PPKFSNGPLVGY 1253
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
Y +++ A N +G S+VV + + E++P AP + + +ST + VTW P RE
Sbjct: 982 YHLRILAENRLGLSDPSQVVQVSTLEEVPSGAPVDIRAEAKSSTELVVTWEPPN--RETW 1039
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW---------ALIVGLQPDTKYYVKVMAY 472
G L+G+ + Y +E + E++ S T ++ A++ GL T Y + V AY
Sbjct: 1040 NGNLLGYHVGY-QEVSTEDSNNVAQSYTFKSVEVRPHYGGEAVLQGLSKYTTYGIIVQAY 1098
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N+ G GP S+ RT AP PP V ++ ++H++W P I GYKV
Sbjct: 1099 NSRGSGPASDPVTARTLEDAPSLPPLNVQCSVLSAQSLHISWEPPLPEGRNGIIQGYKV- 1157
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
+ + +D + N L I L Y M VLA+++ GDG S P T+
Sbjct: 1158 TYHSAGEWFDNDDQQTKIINQLRTTISGLRKFTNYSMTVLAYTSSGDGARSEP--TYCQT 1215
Query: 593 EE 594
EE
Sbjct: 1216 EE 1217
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 3/178 (1%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTAT 63
GG++ I C P W+++G I+ R++++ NG L++ R +D+G Y+C A
Sbjct: 538 GGSLVIKCPVAGYPIETISWEREGQILPVNRRQRVYANGTLVVEQTQRNEDAGTYTCQAQ 597
Query: 64 NVH-GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N D + V+ P P + + C E L + + W N
Sbjct: 598 NRQRNSDRRNVEVQVIVPPKILPINPMTGVLREGMRAAITCQI-MEGDLPITFRWERNAK 656
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ N I+ L I + A +G Y C+ + G + V PP
Sbjct: 657 AVSNNVALGTVIRRIDEFSSSLIIEQVTSAHSGNYTCIASNVAGAEKHVVPLTVNVPP 714
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 109/279 (39%), Gaps = 39/279 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
NV + C P P +W+ + + GGR+ IF N L+I D YSC+ N +
Sbjct: 1336 NVYLHCKRVGIPLPNAIWRVNDLPLEVGGRKTIFPNATLVIKDTQSVDQANYSCSVENQY 1395
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITI--AAHRNLQLRCSAH---TEELLD--VAYIWTH 119
G DE + L VL P P +++ A +L LR S +L + Y H
Sbjct: 1396 GRDEIEYSLKVLVPPE-----APVLSVVEAFTDSLHLRWSDQGNGGSPILGYVINYKRDH 1450
Query: 120 NGVRIGNMDLNELETPNINIDGG---LLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ E N+ G LL IT + G + + TK TV V
Sbjct: 1451 GDWEELQISARTDEHMLRNLWCGTRYLLYITAFNRIGTG-----LPCDIVGAHTKGTVPV 1505
Query: 177 EGPPGLPGGVQVVEVHKTSATI---QWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ P Q++ ++ T TI W DG G I ++ I R +S W S HV
Sbjct: 1506 K-----PKQSQMLTMNATVVTIWLDSWGDG---GCGILYFVIEFRPGKHSPWIMSSNHV- 1556
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272
K +R E L P + Y+ K+ A N G E
Sbjct: 1557 -KPTERIYSISE------LWPATEYQLKITAHNNAGNTE 1588
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 16/162 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
G +VT+ C + P P + WK++ + G R I G L IS V +D G+Y C
Sbjct: 255 GEDVTLPCVAQGHPVPGYYWKRELQGQSVPVALGERLTILSAGLLRISKVRLEDRGVYVC 314
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G +ES + + P P + + +C + + V+ W HN
Sbjct: 315 FANNSAG-EESVRVTLEITAPLSAHVQPQVQVVDVGKEASFQCIVNGYPVSQVS--WLHN 371
Query: 121 GVRIGNMDLNEL--ETPNINIDGGLLEITNASFADAGEYECV 160
G + E+ E P L I S D G Y+C+
Sbjct: 372 GKPVAPDHRVEVMAEPPR-------LTIRQLSKDDRGMYQCL 406
>gi|326933709|ref|XP_003212943.1| PREDICTED: neurofascin-like [Meleagris gallopavo]
Length = 1043
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 205/440 (46%), Gaps = 51/440 (11%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N + GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 268 CPFFGSPIPTLRWFKNGQGNTL-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKA 326
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 327 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 385
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------EG 178
E D GL I + D G+Y CV + + K S K + V E
Sbjct: 386 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLREL 436
Query: 179 P---PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
P P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 437 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 492
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 493 -----RYPGNVNSAVLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 546
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 547 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 603
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED+P +P+ + R N +IN+ W+
Sbjct: 604 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPS-SPRYLRIRQPNLESINLEWD 659
Query: 413 PIELIRENIRGRLIGHRIKY 432
E+ G L G+ ++Y
Sbjct: 660 ----HPEHPNGVLTGYNLRY 675
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 142/628 (22%), Positives = 237/628 (37%), Gaps = 105/628 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I E I V RD S +Y
Sbjct: 167 GEDGR--LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVY 222
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 223 QCNASNEHGYLLANAFVSVL-------DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGS 273
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG N L+ N + G LE++ A D G Y CV + +GK
Sbjct: 274 PIPTLRWFKNG------QGNTLDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKAE 327
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + V+ P + G + V + S P H ++ + ++
Sbjct: 328 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVK-----HDPTLKLT 370
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNTPA 284
+ + Y G + ++ L + E + +A EL + PA
Sbjct: 371 VTWLKDDAPLYIGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPA 430
Query: 285 DK----PYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDTEF 335
++ P + P R ++ DL+ ++W +P + N+P Y + + + F
Sbjct: 431 NRLRELPKERPDR--PRDLELSDLAERSVKLTW--IPGDDNNSPITDYIV---QFEEDRF 483
Query: 336 QSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAED 388
Q T + GNV AV+ + Y Y+ +V A+NDVG P SE A
Sbjct: 484 QPGTWHNHSRYPGNVNSAVLSLSP---YVNYQFRVIAVNDVGSSLPSMPSERYQTSGAR- 539
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAVYY 445
P++ P GV G + +TW P+ + G ++Y W+ +P + +
Sbjct: 540 -PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS---W 589
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T + +V P Y +KV A N+ G PE E Y+ + P P + I+
Sbjct: 590 YNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPSS-PRYLRIRQ 648
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVDLS 562
N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 649 PNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQRTD 704
Query: 563 PGKRYHMRVLAFSNGGDGRM---SSPAI 587
P RY + A + GDG + SPA+
Sbjct: 705 PISRYRFFLRARTQVGDGEVIVEESPAL 732
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 77 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 136
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 137 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 193
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 194 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 246
>gi|237858646|ref|NP_001153794.1| neurofascin isoform 6 precursor [Gallus gallus]
Length = 1235
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 51/440 (11%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 511
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 512 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 570
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 571 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 621
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 622 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 677
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 678 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 731
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 732 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 788
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED+P +P+ + R N +IN+ W+
Sbjct: 789 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPS-SPRYLRIRQPNLESINLEWD 844
Query: 413 PIELIRENIRGRLIGHRIKY 432
E+ G L G+ ++Y
Sbjct: 845 ----HPEHPNGVLTGYNLRY 860
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 146/630 (23%), Positives = 238/630 (37%), Gaps = 109/630 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I E I V RD S +Y
Sbjct: 352 GEDGR--LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVY 407
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 408 QCNASNEHGYLLANAFVSVL-------DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGS 458
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG GNM L+ N + G LE++ A D G Y CV + +GK+
Sbjct: 459 PIPTLRWFKNGQ--GNM----LDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVE 512
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFN 227
+ + V+ P + G + V + S P H ++ TW
Sbjct: 513 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVKHDPTLKLTVTW-- 558
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNT 282
+ + Y G + ++ L + E + +A EL +
Sbjct: 559 -----LKDDAPLYIGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAI 613
Query: 283 PA----DKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
PA D P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 614 PANRLRDLPKERPDR--PRDLELSDLAERSVKLTW--IPGDDNNSPITDYIVQFE---ED 666
Query: 334 EFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSA 386
FQ T + GNV A++ + Y Y+ +V A+NDVG P SE A
Sbjct: 667 RFQPGTWHNHSRYPGNVNSALLSLSP---YVNYQFRVIAVNDVGSSLPSMPSERYQTSGA 723
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAV 443
P++ P GV G + +TW P+ + G ++Y W+ +P +
Sbjct: 724 R--PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS-- 773
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T + +V P Y +KV A N+ G PE E Y+ + P P + I
Sbjct: 774 -WYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPSS-PRYLRI 831
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVD 560
+ N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 832 RQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQR 887
Query: 561 LSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
P RY + A + GDG + SPA+
Sbjct: 888 TDPISRYRFFLRARTQVGDGEVIVEESPAL 917
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|301762171|ref|XP_002916515.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1-like [Ailuropoda
melanoleuca]
Length = 2143
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 155/597 (25%), Positives = 250/597 (41%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP W++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 428 DGMTAVLRCEVSGAPKPAITWRRGKHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 487
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S ++ I + L C A + + + Y+W
Sbjct: 488 CYAANTEGSLNASAALTVWNRTSIVNPPEDRVVIKGTTAM-LHCGATHDPRITLRYVWKK 546
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 547 DNTVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRTARLEVIEL 602
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + H + + W P+ +Y + N NS W V +G E+
Sbjct: 603 PHSPQNLLASLNSSHSHTVVLSWVRPFDGNSPVLYYIVEVSEN-NSPW-KVHLSNVGPEM 660
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 661 TGVAVRG-------LTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVAS 713
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 714 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIT---SPEVNYCLVTEL 770
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 771 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFFWNPPP- 829
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W + PE TAV ++ + I L+ T Y V+ +
Sbjct: 830 -QQFINGINQGYKLLAWPAEVPEATAVVTIAPDFHGVHHGYITNLKKFTAYRTSVLCFTT 888
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY+V
Sbjct: 889 PGDGPPSTPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQVS 943
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I L Y + V A + G G +S I+
Sbjct: 944 -WEVYGRNGSRLTHTL--SNTTQEYKIKGLLSLTTYTIDVAAVXSPGAGLATSSTIS 997
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 208/489 (42%), Gaps = 62/489 (12%)
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
++ NG R+ + N + I GLL +T + A V S ++T +T+
Sbjct: 946 VYGRNGSRLTHTLSNTTQEYKIK---GLLSLTTYTIDVAA-----VXSPGAGLATSSTIS 997
Query: 176 VEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 998 SGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG-----------A 1046
Query: 233 IGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
IG E V Y E + + L P++ Y F++ N +G S S T
Sbjct: 1047 IGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQA 1106
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKE 342
P AP+ I L + W PLP + N ++ Y+I +WR + Q+ L +
Sbjct: 1107 PPDVAPTSITVRTASETSLRLRWVPLPDSQYNGNPESVGYRIGYWRP----DLQAPVLAQ 1162
Query: 343 YGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQG 396
N R+ EF +TEYE+++QA N +G GP SE V + E +P AP+
Sbjct: 1163 VIND-----RLEREFTIEGLEEWTEYELQMQAFNAIGAGPWSETVRGRTRESVPSAAPEN 1217
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
V + +ST I +TW + +N G ++G++I + +D E + + AL+
Sbjct: 1218 VSAEAVSSTQILLTWALVPEQDQN--GLILGYKILFRAKDLDPEPRSHVVRGNHTQSALL 1275
Query: 457 VGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
GL+ Y ++V+A+ G G P S LERT AP PP + + T+V + W+
Sbjct: 1276 AGLRKFVLYELQVLAFTRIGNGVPSSPLILERTKDDAP-GPPVRLVFPEVRLTSVRIVWQ 1334
Query: 516 YVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRV 571
EEP I+GY++ S T + VG T+ +L+P Y R+
Sbjct: 1335 P-----PEEPNGIILGYQIAYRLASS--SPNTFTTVEVGATVRQFTATELAPESAYIFRL 1387
Query: 572 LAFSNGGDG 580
A + G G
Sbjct: 1388 SAKTRQGWG 1396
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 158/369 (42%), Gaps = 47/369 (12%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + R W + +VS V+R
Sbjct: 1424 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSVSHEATACAVER------ 1477
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + S + T D P + PS + +
Sbjct: 1478 ------LRPFTSYKLRLKATNDIGDSDFSGETDAVTTLQDVPGEPPSFVSVTPHTTSSVL 1531
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGNVGIA 349
I W P E N Y+I++R+ K + ++E + + V +
Sbjct: 1532 IQWRPPRDESLNGLLQGYRIYYRELESEASSASVSKTLKTPSALRAELAAQSSFKTVNSS 1591
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YE+ + A N +G P S V +F E P +APQ + ++
Sbjct: 1592 STLTTYELTRLKKYRRYELILTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTAS 1651
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWK---EDNPEETAVYYLSRTTRNWALIVGLQPD 462
+ VTW+P +N G + G+++ YW+ ++ E+ V +L T + L
Sbjct: 1652 QLEVTWDPPPPESQN--GNIQGYKVYYWEAGSQNETEKMKVLFLPETVVK---LKNLTSH 1706
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
T+Y V + A+N AG+GP+S RT++ AP PS + I TT++V+W P+
Sbjct: 1707 TQYLVSISAFNAAGDGPQSAPRQGRTHQAAPGT-PSFLAFSEITSTTLNVSWG--EPAAA 1763
Query: 523 EEPIIGYKV 531
+ GY+V
Sbjct: 1764 NGVLQGYRV 1772
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 168/416 (40%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + P+ II T + VS V G+
Sbjct: 904 EDKPGAVGHLSFTEILDTSLKVSWQE------PLEKNGII-------TGYQVSWEVYGRN 950
Query: 237 VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
R T + + L+ +TY V A G G +S + P + P APS
Sbjct: 951 GSRLTHTLSNTTQEYKIKGLLSLTTYTIDVAAVXSPGAGLATSSTISSGVPPELP-GAPS 1009
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ ++ + P K + + D E +E ++
Sbjct: 1010 NLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVSLYEEENEPDAQMLE 1069
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTW 411
IP+ YT Y +++ +N VG P S+ + + + P VAP + R + T++ + W
Sbjct: 1070 IPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLRLRW 1129
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+RI YW+ D ++ I GL+ T+Y +++ A
Sbjct: 1130 VPLPDSQYNGNPESVGYRIGYWRPDLQAPVLAQVINDRLEREFTIEGLEEWTEYELQMQA 1189
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1190 FNAIGAGPWSETVRGRTRESVPSAAPENVSAEAVSSTQILLTWALVPEQDQNGLILGYKI 1249
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1250 LFRAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLI 1304
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 99/230 (43%), Gaps = 4/230 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 674 YQFRVCAVNQVGKGQYSAETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 733
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 734 --GVLRGYILRYRLAGLPGEHQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVF 791
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TT+ W F GYK+ W +
Sbjct: 792 SRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFFWNPPPQQFINGINQGYKLLAWPAEVPE 851
Query: 541 SRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ A TI P I +L Y VL F+ GDG S+P + +
Sbjct: 852 ATAVVTIAPDFHGVHHGYITNLKKFTAYRTSVLCFTTPGDGPPSTPQLVW 901
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 187/467 (40%), Gaps = 49/467 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1313 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1370
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1371 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1422
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1423 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSVSHEATACAVERLRP-- 1480
Query: 358 YYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T Y+++++A ND+G S E + + +D+P P V ++++ + W P
Sbjct: 1481 -FTSYKLRLKATNDIGDSDFSGETDAVTTLQDVPGEPPSFVSVTPHTTSSVLIQWRPPR- 1538
Query: 417 IRENIRGRLIGHRIKYWK----------------------EDNPEETAVYYLSRTTRNWA 454
E++ G L G+RI Y + E + + S +T
Sbjct: 1539 -DESLNGLLQGYRIYYRELESEASSASVSKTLKTPSALRAELAAQSSFKTVNSSSTLTTY 1597
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ L+ +Y + + AYN GE P S AP P + + + + + VTW
Sbjct: 1598 ELTRLKKYRRYELILTAYNIIGESPASAPVEVFVGEAAPAMAPQNIQVTPLTASQLEVTW 1657
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
P + I GYKV WE ++ + T+ + +L+ +Y + + AF
Sbjct: 1658 DPPPPESQNGNIQGYKVYYWEAGSQNETEKMKVLFLPETV-VKLKNLTSHTQYLVSISAF 1716
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
+ GDG S+P + G + G+P+ + S + S+TL +
Sbjct: 1717 NAAGDGPQSAP----RQGRTHQAAPGTPSFLAFSE----ITSTTLNV 1755
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 208/491 (42%), Gaps = 40/491 (8%)
Query: 140 DGGLLEITNASFADAGEYEC----VVKSTVGKISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + VV ++ S++ ++ PP + P + V +T
Sbjct: 1064 DAQMLEIPNLTPYTHYRFRMRQVNVVGASPFSQSSRVIQTLQAPPDVAPTSITVRTASET 1123
Query: 195 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y+I R + + V VI ++R E +IE
Sbjct: 1124 SLRLRWVPLPDSQYNGNPESVGYRIGYWRPDLQAP---VLAQVINDRLER-----EFTIE 1175
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L W+ YE ++ A N +G G P S + + T P AP + + ++W
Sbjct: 1176 G-LEEWTEYELQMQAFNAIGAG-PWSETVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1233
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1234 LVPEQDQNGLILGYKILFRAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVLYELQVLA 1290
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S ++ + +D P + VF T++ + W P E G ++G
Sbjct: 1291 FTRIGNGVPSSPLILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1345
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1346 YQIAYRLASSSPNTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVI 1404
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + V+V E+ + +
Sbjct: 1405 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSS 1464
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS--SPAITFQM---GEEKEFKSGS 601
+ T A + L P Y +R+ A ++ GD S + A+T GE F S +
Sbjct: 1465 SVSHEATACA-VERLRPFTSYKLRLKATNDIGDSDFSGETDAVTTLQDVPGEPPSFVSVT 1523
Query: 602 PALYSASTTLL 612
P ++ S+ L+
Sbjct: 1524 P--HTTSSVLI 1532
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 16/176 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD IG+ R K+ +G L I + +DSGI+ C A+N
Sbjct: 339 VDIACQAMGVPLPTLQWYKDAVSIGTLQNPRYKLLSSGGLRIQGLRPEDSGIFQCFASNE 398
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHN 120
G ++ L V + + QLP T+ LRC + +I
Sbjct: 399 GGEIQTYTYLDVTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPKPAITWRRGKHILASG 458
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I DAG Y C +T G ++ + V
Sbjct: 459 SVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASAALTV 505
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1835 EGSPGSPRDVLVTK-SASELTLQWTEGNAGRTPTTGYVIEARPSDEGLW-----DMFVKD 1888
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 1889 IPRSATSYTVSLDK-LRQGVTYEFRVVAVNQAGYGEPSSPSTAVSAQVETPF 1939
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + DSG Y A N + L
Sbjct: 152 SCPRPQVTWFREGHKIIPSNRIAITLENQLVILATTVGDSGAYYAQAVNERNGENKTSPL 211
Query: 76 IVL---HGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
I L E + P I I A + L C A+ + ++ W NGV++
Sbjct: 212 IHLSIARDVGTPETMAPVIVIPPGNRSVVAGSNEITLECIANARPVEELHVNWKRNGVKV 271
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I + + AD G Y C
Sbjct: 272 ---------TSGLHSFGRRLTIGSPTSADTGLYVC 297
>gi|443706398|gb|ELU02465.1| hypothetical protein CAPTEDRAFT_220777 [Capitella teleta]
Length = 1327
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 236/538 (43%), Gaps = 41/538 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A EG + + C +PKP+ VWKK G+ +GGR K+ E+G+L I+ VS D+G Y+C
Sbjct: 435 AAEGQTINLTCTVFGSPKPQVVWKK-GSEQLTGGRYKVLEDGHLQITDVSLVDAGTYTCN 493
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT--EELLDVAYIWTH 119
ATN + G L+V + + P + I + C+A T EE+ +++ W
Sbjct: 494 ATNKFDTASATGSLVVRRK-TQIQTEPLDVMIYEGTEAKFTCTATTDPEEVNNLSIEWKK 552
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+G I + N++ L I+ D G+Y C+ + + + ++V+
Sbjct: 553 DGQLIDYALAQRVFRNNMD---NSLTISGTISLDTGKYTCMAVNGLDSDESSAQLVVQAV 609
Query: 180 PGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEV 237
P P V V ++ A + W G N PI ++ I T++N TW++++ +V E
Sbjct: 610 PDPPNNVWVRCYNEDRRAEVNWQPGKENYAPILNFIIQFNTSFNPDTWYDIATNVSQNER 669
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIGG 296
+ L PW Y F+++A N++G PS+ + + P + P + G
Sbjct: 670 MKIVS---------LSPWGNYTFRILARNKIGQSPPSAHTVEVCQVQPGTPDKNPENVIG 720
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS- 355
G +L I W P+P +QN P+ Y + W++ D E E + +P
Sbjct: 721 EGDLPDNLVIFWTPMPSIEQNGPDFKYIVTWQRA-DIEDAVENVATIQRSDAWHHLVPDK 779
Query: 356 EFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGV--FSRGFNSTAINVTWN 412
+ Y + +KV+A N G E + V +S ED P+VAP V S + +TW
Sbjct: 780 QETYKPFYIKVKANNGKGDAKVEPKTVIGYSGEDEPRVAPVDVTIVPESIGSDNVLLTWT 839
Query: 413 PIELIRENIRGRLIGHRIKYWK-EDNP----EETAV------YYLSRTTRNWALIV---- 457
++ E IRG G+RI++ K ED P EE + Y R R +V
Sbjct: 840 QVDTSPEEIRGFFRGYRIQFGKTEDWPQMIREEDVIFNDPLQYPRPRVKRELPRVVEIKV 899
Query: 458 -GLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
L P + +++ N GP S T P PP+ + + T +TW
Sbjct: 900 NHLPPYSDITLQIRVLNKYYAGPPSPTIQFTTLEGVP-GPPAMIDVVVRGSTHFELTW 956
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 126/562 (22%), Positives = 215/562 (38%), Gaps = 61/562 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C EA P P W +G I R++ L+ ++++D+ + C +TN HG
Sbjct: 351 CQTEAIPAPVSFWFLNGIPISKVPADPRRVTVGNKLIFYNMTKEDAQVIQCNSTNKHGYA 410
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
L VL P P AA + + L C+ V +W ++
Sbjct: 411 WENAYLNVLSEPPTITDPPLLNQKAAEGQTINLTCTVFGSPKPQV--VWKKGSEQLTGGR 468
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGG 185
LE G L+IT+ S DAG Y C + S +++V + P
Sbjct: 469 YKVLE-------DGHLQITDVSLVDAGTYTCNATNKFDTASATGSLVVRRKTQIQTEPLD 521
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V + E + T T T+ + + I + + + +++ V +D
Sbjct: 522 VMIYEGTEAKFTCTAT---TDPEEVNNLSIEWKKDGQLIDYALAQRVFRNNMD-----NS 573
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
+I + T ++ +A N L E S+ P D P R +
Sbjct: 574 LTISGT-ISLDTGKYTCMAVNGLDSDESSAQLVVQAVP-DPPNNVWVRCYNEDRR---AE 628
Query: 306 ISWEPLPREKQN-APNIYYKIFWRKKNDTEFQSETLKEYG-NVGI-AVVRIPSEFYYTEY 362
++W+P K+N AP + + I + +T F +T + NV ++I S + Y
Sbjct: 629 VNWQP---GKENYAPILNFII----QFNTSFNPDTWYDIATNVSQNERMKIVSLSPWGNY 681
Query: 363 EVKVQAINDVGPGPES-EVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++ A N +G P S V + + P P+ V G + + W P+ I +N
Sbjct: 682 TFRILARNKIGQSPPSAHTVEVCQVQPGTPDKNPENVIGEGDLPDNLVIFWTPMPSIEQN 741
Query: 421 IRGRLIGHRIKY---WKEDNPEETAVYYLSRTTRN--WALIVGLQPDT--KYYVKVMAYN 473
G KY W+ + E+ AV ++ R+ W +V + +T +Y+KV A N
Sbjct: 742 ------GPDFKYIVTWQRADIED-AVENVATIQRSDAWHHLVPDKQETYKPFYIKVKANN 794
Query: 474 NAGEGP-ESERYLERTYRKAPQKPPSAVHI--KGINPTTVHVTWRYVSPSFEEEP--IIG 528
G+ E + + + P+ P V I + I V +TW V S EE G
Sbjct: 795 GKGDAKVEPKTVIGYSGEDEPRVAPVDVTIVPESIGSDNVLLTWTQVDTSPEEIRGFFRG 854
Query: 529 YKVRVWEVDQ--DMSRANDTII 548
Y+++ + + M R D I
Sbjct: 855 YRIQFGKTEDWPQMIREEDVIF 876
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 102/256 (39%), Gaps = 38/256 (14%)
Query: 346 VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP-QVAPQGVFSRGFNS 404
V I V +P Y++ ++++ +N GP S + + E +P A V RG S
Sbjct: 895 VEIKVNHLPP---YSDITLQIRVLNKYYAGPPSPTIQFTTLEGVPGPPAMIDVVVRG--S 949
Query: 405 TAINVTWN-PIELIRENIRGRLIGHRIKYWKEDNPEETAVYY---LSRTTRNWALIVGLQ 460
T +TW+ P E G L+G+ I Y + Y +S T A + GL
Sbjct: 950 THFELTWDLPYEP-----NGVLVGYNISYQTITGLNLGRLQYREAISDPTIQRARLTGLM 1004
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
PDT Y V + A G+G +L+ P + I G+N T V+VTW PS
Sbjct: 1005 PDTYYRVFLSAVTRRGKG--EPIFLDMKTTPPGPPSPPSFAITGLNETWVNVTWE---PS 1059
Query: 521 FEEEP----IIGYKVR---VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
P + Y+VR W D T ++ DL PG Y +R ++
Sbjct: 1060 RSGNPGSVFYVSYRVRGKYEWLHTPDEYLNYYT----------NLYDLDPGTTYMIRCVS 1109
Query: 574 FSNGGDGRMSSPAITF 589
NG SP F
Sbjct: 1110 -KNGEGHEAPSPWQEF 1124
>gi|237858652|ref|NP_001153796.1| neurofascin isoform 8 precursor [Gallus gallus]
Length = 1064
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 51/440 (11%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 511
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 512 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 570
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 571 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 621
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 622 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 677
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 678 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 731
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 732 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 788
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED+P +P+ + R N +IN+ W+
Sbjct: 789 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPS-SPRYLRIRQPNLESINLEWD 844
Query: 413 PIELIRENIRGRLIGHRIKY 432
E+ G L G+ ++Y
Sbjct: 845 H----PEHPNGVLTGYNLRY 860
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 146/630 (23%), Positives = 238/630 (37%), Gaps = 109/630 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I E I V RD S +Y
Sbjct: 352 GEDGR--LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVY 407
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 408 QCNASNEHGYLLANAFVSVL-------DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGS 458
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG GNM L+ N + G LE++ A D G Y CV + +GK+
Sbjct: 459 PIPTLRWFKNGQ--GNM----LDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVE 512
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFN 227
+ + V+ P + G + V + S P H ++ TW
Sbjct: 513 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVKHDPTLKLTVTW-- 558
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNT 282
+ + Y G + ++ L + E + +A EL +
Sbjct: 559 -----LKDDAPLYIGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAI 613
Query: 283 PA----DKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
PA D P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 614 PANRLRDLPKERPDR--PRDLELSDLAERSVKLTW--IPGDDNNSPITDYIVQFE---ED 666
Query: 334 EFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSA 386
FQ T + GNV A++ + Y Y+ +V A+NDVG P SE A
Sbjct: 667 RFQPGTWHNHSRYPGNVNSALLSLSP---YVNYQFRVIAVNDVGSSLPSMPSERYQTSGA 723
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAV 443
P++ P GV G + +TW P+ + G ++Y W+ +P +
Sbjct: 724 R--PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS-- 773
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T + +V P Y +KV A N+ G PE E Y+ + P P + I
Sbjct: 774 -WYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPSS-PRYLRI 831
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVD 560
+ N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 832 RQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQR 887
Query: 561 LSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
P RY + A + GDG + SPA+
Sbjct: 888 TDPISRYRFFLRARTQVGDGEVIVEESPAL 917
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|237858639|ref|NP_001004709.2| neurofascin isoform 3 precursor [Gallus gallus]
Length = 1144
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 51/440 (11%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 511
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 512 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 570
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 571 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 621
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 622 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 677
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 678 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 731
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 732 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 788
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED+P +P+ + R N +IN+ W+
Sbjct: 789 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPS-SPRYLRIRQPNLESINLEWD 844
Query: 413 PIELIRENIRGRLIGHRIKY 432
E+ G L G+ ++Y
Sbjct: 845 ----HPEHPNGVLTGYNLRY 860
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 146/630 (23%), Positives = 238/630 (37%), Gaps = 109/630 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I E I V RD S +Y
Sbjct: 352 GEDGR--LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVY 407
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 408 QCNASNEHGYLLANAFVSVL-------DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGS 458
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG GNM L+ N + G LE++ A D G Y CV + +GK+
Sbjct: 459 PIPTLRWFKNGQ--GNM----LDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVE 512
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFN 227
+ + V+ P + G + V + S P H ++ TW
Sbjct: 513 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVKHDPTLKLTVTW-- 558
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNT 282
+ + Y G + ++ L + E + +A EL +
Sbjct: 559 -----LKDDAPLYIGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAI 613
Query: 283 PA----DKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
PA D P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 614 PANRLRDLPKERPDR--PRDLELSDLAERSVKLTW--IPGDDNNSPITDYIVQFE---ED 666
Query: 334 EFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSA 386
FQ T + GNV A++ + Y Y+ +V A+NDVG P SE A
Sbjct: 667 RFQPGTWHNHSRYPGNVNSALLSLSP---YVNYQFRVIAVNDVGSSLPSMPSERYQTSGA 723
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAV 443
P++ P GV G + +TW P+ + G ++Y W+ +P +
Sbjct: 724 R--PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS-- 773
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T + +V P Y +KV A N+ G PE E Y+ + P P + I
Sbjct: 774 -WYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPSS-PRYLRI 831
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVD 560
+ N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 832 RQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQR 887
Query: 561 LSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
P RY + A + GDG + SPA+
Sbjct: 888 TDPISRYRFFLRARTQVGDGEVIVEESPAL 917
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|357621018|gb|EHJ73004.1| putative protein sidekick precursor [Danaus plexippus]
Length = 2135
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 263/654 (40%), Gaps = 77/654 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
+G + TI C AP P W D II GR + + G+LLI+ V+ DSG Y+C
Sbjct: 408 DGKDATISCRAIGAPTPNVTWYFNDSLIINLSGRLQALDEGDLLITSVATADSGKYTCIR 467
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHN- 120
N G + L VL PP T + L+C ++ + W HN
Sbjct: 468 ANDAGNVSGEAYLTVLVRTQIIA--PPVDTRVLLGHTATLQCKVSSDPNVKYNIDWFHNK 525
Query: 121 -----GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
G R+ +++DG L ++ DAGEY CVV S G + + T+
Sbjct: 526 QPMTAGSRVW-----------VSVDGSL-QVQAVRAGDAGEYTCVVTSPGGNHTRRATLS 573
Query: 176 VEGPPGLPGGVQVVEVH--KTSATIQWTDGATNGRPITHYKIIART------------NW 221
V P P V+ + + + + WT G PI + + R NW
Sbjct: 574 VIELPFSPSNVRADRLASPQRAVNVSWTPGFDGNSPIQKFIVQRRVVPEFGPIPDPLLNW 633
Query: 222 NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYN 281
+ NVS + + + L ++Y+F+V A N +G G PS P+
Sbjct: 634 VTEPMNVSAN------------QRWVLLTSLKAATSYQFRVSAVNTVGEGPPSDPTDVLT 681
Query: 282 TPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK 341
P + P P G ++ W+P E +N + Y I +R K E T +
Sbjct: 682 LPQEAPSGPPLGFMGSARSSSEIITQWQPPLEEHRNGHILGYVIRYRLKG-YENSPWTYQ 740
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
N I + +Y V++ A ND G G S+ TI + E +P+ P V
Sbjct: 741 NITNEAQRNYLIQDLITWKDYNVQIAAYNDKGVGMFSDSYTIKTKEGVPEAPPDSVRCDP 800
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY---------YLSRTTRN 452
+NSTAI V W P + I G ++I+ W D+ + +V L T
Sbjct: 801 YNSTAIQVWWTPPN--PQKINGI---NQIQAWLWDDSQNDSVEQKLVSVPPNLLDPLTEQ 855
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A+I GL+ T+Y + V+ + G+GP SE RT P + + + I+ V V
Sbjct: 856 TAVINGLEKFTEYNISVLCFTEPGDGPRSEFISVRTKEDIPDEVMN-LQFDDISDRAVRV 914
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W P +IGYK++ +++ ++ + I+P N + L +Y V
Sbjct: 915 SWS--PPKKSNGVLIGYKLK-YQIKENPETFKEEILP-PNVTSVRVEHLQASTQYQFWVS 970
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYIFVAFS 626
A + G+G + A+ Q G E P L A T L L + + F+
Sbjct: 971 ALTGVGEGGARAAAL--QSGVE-------PVLPRAPTNLALSNIEAHSVLLQFT 1015
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 26/354 (7%)
Query: 197 TIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256
T WT G P+ +Y I + STW + E V D + + L P++
Sbjct: 1417 TFSWTPGDDGYAPLRYYTIQQKEE-GSTWQTLPERV-----DPFATSYTV---DGLKPYT 1467
Query: 257 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ 316
Y+F++ A N++G S+ + T P +A ++ + + W L +
Sbjct: 1468 AYQFRIRATNDIGPSRYSNATETVRTLPAAPSKAVEKLVVVPITPSSVRVQWRALGEQHW 1527
Query: 317 NAPNIY--YKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
+ Y + ++ D T Q +E + V + YE+ V A+N G
Sbjct: 1528 SGDTRTGGYSVSYQPLTDFTSLQRAMKREVPGIKSEEVILTDLAVDRNYEISVCAVNSQG 1587
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP ++ E +P PQ V +R + T + +TW+P ++N G L+G++I Y
Sbjct: 1588 AGPVGAPAVVWVGEAVPTAPPQQVEARALSPTEVALTWHPPLQAQQN--GDLLGYKIFYL 1645
Query: 434 KEDNPEE--------TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYL 485
++PEE + + T + +L+ L T+Y ++V+A+N AG+GP S
Sbjct: 1646 MTESPEEPEPGRRAEEEIEVVPATATSHSLVF-LDKFTQYRIQVLAFNPAGDGPRSTAIQ 1704
Query: 486 ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
RT++ P P + + I ++ V+W P I Y V ++QD
Sbjct: 1705 VRTHQGLPSAPRN-ITFTDITMNSLVVSWE--PPQRRNGLIHSYLVTYETIEQD 1755
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 151/363 (41%), Gaps = 32/363 (8%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE-HVIGKEVD 238
P P + + + S +Q+T I+ + + A+T NS+W + E + +
Sbjct: 994 PRAPTNLALSNIEAHSVLLQFTPAFDGNSSISLWTVQAQTARNSSWVTIYEVNAPDAQSI 1053
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
TG L+P++TY ++IA N +G PS P ++ T P P +
Sbjct: 1054 LVTG---------LIPFTTYRLRLIATNIVGSSPPSEPCKEFQTIQAPPQHPPRNVTVRA 1104
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF- 357
+L + W PL + + Y I +++ ++TL + A + S
Sbjct: 1105 VSANNLRVRWIPLQQSEWYGNPKGYNITYKRSGS----NDTLYSIIDDHTANSHVLSNLE 1160
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
++ YE+ + AIN+VG S T + E +P P V + +ST + V W I L
Sbjct: 1161 EWSVYEITMTAINEVGTSAVSPTATERTREAVPSSGPINVSANATSSTTVVVLWGDIPLQ 1220
Query: 418 RENIRGRLIGHRIKYWK---EDNPEETAV--YYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+N G + G+++ Y PE V + + + + L+ Y V+V+ Y
Sbjct: 1221 DQN--GLIEGYKVCYAAVVPPPRPEHKKVECHPIPSNQTHTVTLTELRKYVVYQVQVLGY 1278
Query: 473 NNAGEGPESERYLE-RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP---IIG 528
G+G S+ + RTY P PPS V + TT + W E+P I+
Sbjct: 1279 TRLGDGALSDPPVTVRTYEDTP-GPPSNVSFPDVTFTTARIIW-----DVPEDPNGEILA 1332
Query: 529 YKV 531
YKV
Sbjct: 1333 YKV 1335
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 132/616 (21%), Positives = 230/616 (37%), Gaps = 58/616 (9%)
Query: 5 GGNVTIFCNPEAAPKPKF--VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G T+ C + P K+ W + + +G R + +G+L + V D+G Y+C
Sbjct: 500 GHTATLQCKVSSDPNVKYNIDWFHNKQPMTAGSRVWVSVDGSLQVQAVRAGDAGEYTCVV 559
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
T+ G + L V+ P + + R + + + + + V
Sbjct: 560 TSPGGNHTRRATLSVIELPFSPSNVRADRLASPQRAVNVSWTPGFDGNSPIQKFIVQRRV 619
Query: 123 -----RIGNMDLNELETP-NINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTV 174
I + LN + P N++ + + +T+ A + ++ +TVG+ S T V
Sbjct: 620 VPEFGPIPDPLLNWVTEPMNVSANQRWVLLTSLKAATSYQFRVSAVNTVGEGPPSDPTDV 679
Query: 175 IV---EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRP------ITHYKIIARTNWNSTW 225
+ E P G P G + QW R + Y++ N T+
Sbjct: 680 LTLPQEAPSGPPLGFMGSARSSSEIITQWQPPLEEHRNGHILGYVIRYRLKGYENSPWTY 739
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
N++ ++ I++ L+ W Y ++ A N+ G G S S T
Sbjct: 740 QNITNE----------AQRNYLIQD-LITWKDYNVQIAAYNDKGVGMFSD-SYTIKTKEG 787
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGN 345
P P + + + W P +K N N W + + + + N
Sbjct: 788 VPEAPPDSVRCDPYNSTAIQVWWTPPNPQKINGINQIQAWLWDDSQNDSVEQKLVSVPPN 847
Query: 346 V------GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
+ AV+ +F TEY + V + G GP SE +++ + ED+P F
Sbjct: 848 LLDPLTEQTAVINGLEKF--TEYNISVLCFTEPGDGPRSEFISVRTKEDIPDEVMNLQFD 905
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ A+ V+W+P + G LIG+++KY ++NPE L + + L
Sbjct: 906 -DISDRAVRVSWSP----PKKSNGVLIGYKLKYQIKENPETFKEEILPPNVTS-VRVEHL 959
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Q T+Y V A GEG L+ + P+ + + I H +P
Sbjct: 960 QASTQYQFWVSALTGVGEGGARAAALQSGVEPVLPRAPTNLALSNIE---AHSVLLQFTP 1016
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNTLDAD---IVDLSPGKRYHMRVLAF 574
+F+ I +W V +R + TI V N DA + L P Y +R++A
Sbjct: 1017 AFDGNSSIS----LWTVQAQTARNSSWVTIYEV-NAPDAQSILVTGLIPFTTYRLRLIAT 1071
Query: 575 SNGGDGRMSSPAITFQ 590
+ G S P FQ
Sbjct: 1072 NIVGSSPPSEPCKEFQ 1087
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS---------------GGRRKIFENGNLLISP 49
G +V + CN + P P W KD I S GGR ++ + +L+IS
Sbjct: 303 GSSVVLECNVQGIPIPSITWYKDARKIASVGADAASDNSDVDDGGGRYRVDVDRSLVISH 362
Query: 50 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
+ +D GIY C A N G L + P + P +T+ ++ + C A
Sbjct: 363 LKMEDMGIYQCIANNAAGESSIYSWLKIKTSPPIMQTGPANLTVLDGKDATISCRAIGAP 422
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+V W N I N+ L+ +D G L IT+ + AD+G+Y C+ + G +S
Sbjct: 423 TPNVT--WYFNDSLIINLS-GRLQA----LDEGDLLITSVATADSGKYTCIRANDAGNVS 475
Query: 170 TKTTVIV 176
+ + V
Sbjct: 476 GEAYLTV 482
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 8/241 (3%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+T Y +++ A N VG P SE F + + PQ P+ V R ++ + V W P++
Sbjct: 1061 FTTYRLRLIATNIVGSSPPSEPCKEFQTIQAPPQHPPRNVTVRAVSANNLRVRWIPLQ-- 1118
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
+ G G+ I Y K +T + T N ++ L+ + Y + + A N G
Sbjct: 1119 QSEWYGNPKGYNITY-KRSGSNDTLYSIIDDHTANSHVLSNLEEWSVYEITMTAINEVGT 1177
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV- 536
S ERT P P V + TTV V W + + I GYKV V
Sbjct: 1178 SAVSPTATERTREAVPSSGPINVSANATSSTTVVVLWGDIPLQDQNGLIEGYKVCYAAVV 1237
Query: 537 ---DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
+ + IP T + +L Y ++VL ++ GDG +S P +T + E
Sbjct: 1238 PPPRPEHKKVECHPIPSNQTHTVTLTELRKYVVYQVQVLGYTRLGDGALSDPPVTVRTYE 1297
Query: 594 E 594
+
Sbjct: 1298 D 1298
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 164/429 (38%), Gaps = 45/429 (10%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG P V +V T+A I W I YK+ N ++ H+ KE
Sbjct: 1297 EDTPGPPSNVSFPDVTFTTARIIWDVPEDPNGEILAYKVTYHLNGSTL------HMFSKE 1350
Query: 237 V---DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS- 292
DR E + E Y F V A +G+G + T A++ AP
Sbjct: 1351 FLPSDRTFRATELASEQY------YVFSVRAQTRVGWG--GTLRALVLTTANRAAPAPPV 1402
Query: 293 --RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
+ + ++ SW P + AP YY I +++ T +TL E +
Sbjct: 1403 TPNVARSLLQPHHITFSWTP--GDDGYAPLRYYTIQQKEEGSTW---QTLPERVDPFATS 1457
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ YT Y+ +++A ND+GP S T+ + P A + + +++ V
Sbjct: 1458 YTVDGLKPYTAYQFRIRATNDIGPSRYSNATETVRTLPAAPSKAVEKLVVVPITPSSVRV 1517
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA--------LIVGLQP 461
W + + R G+ + Y T L R + ++ L
Sbjct: 1518 QWRALGEQHWSGDTRTGGYSVSYQPL-----TDFTSLQRAMKREVPGIKSEEVILTDLAV 1572
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
D Y + V A N+ G GP + P PP V + ++PT V +TW +
Sbjct: 1573 DRNYEISVCAVNSQGAGPVGAPAVVWVGEAVPTAPPQQVEARALSPTEVALTWHPPLQAQ 1632
Query: 522 EEEPIIGYKVRVW-----EVDQDMSRANDTIIPVGNTLDA-DIVDLSPGKRYHMRVLAFS 575
+ ++GYK+ E + RA + I V T + +V L +Y ++VLAF+
Sbjct: 1633 QNGDLLGYKIFYLMTESPEEPEPGRRAEEEIEVVPATATSHSLVFLDKFTQYRIQVLAFN 1692
Query: 576 NGGDGRMSS 584
GDG S+
Sbjct: 1693 PAGDGPRST 1701
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 133/350 (38%), Gaps = 28/350 (8%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L + Y+ +V+ LG G S P T D P PS + I W+ +
Sbjct: 1265 LRKYVVYQVQVLGYTRLGDGALSDPPVTVRTYEDTP-GPPSNVSFPDVTFTTARIIWD-V 1322
Query: 312 PREKQNAPNIYYKIFWRKKNDT--EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369
P E N + YK+ + T F E L + + SE YY + V+ Q
Sbjct: 1323 P-EDPNGEILAYKVTYHLNGSTLHMFSKEFLP--SDRTFRATELASEQYYV-FSVRAQTR 1378
Query: 370 NDVGPGPESEVVTIFS-AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428
G + V+T + A P V P V I +W P + +R I
Sbjct: 1379 VGWGGTLRALVLTTANRAAPAPPVTP-NVARSLLQPHHITFSWTPGDDGYAPLRYYTIQQ 1437
Query: 429 RIK--YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
+ + W + PE + S T + GL+P T Y ++ A N+ G P
Sbjct: 1438 KEEGSTW-QTLPERVDPFATSYT------VDGLKPYTAYQFRIRATNDIG--PSRYSNAT 1488
Query: 487 RTYRKAPQKPPSAVH---IKGINPTTVHVTWRYVSPSF--EEEPIIGYKVRVWEVDQ--D 539
T R P P AV + I P++V V WR + + GY V +
Sbjct: 1489 ETVRTLPAAPSKAVEKLVVVPITPSSVRVQWRALGEQHWSGDTRTGGYSVSYQPLTDFTS 1548
Query: 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ RA +P + + + DL+ + Y + V A ++ G G + +PA+ +
Sbjct: 1549 LQRAMKREVPGIKSEEVILTDLAVDRNYEISVCAVNSQGAGPVGAPAVVW 1598
>gi|432115920|gb|ELK37062.1| Protein sidekick-2 [Myotis davidii]
Length = 1681
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 144/595 (24%), Positives = 249/595 (41%), Gaps = 51/595 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 345 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPARISDAGTYT 404
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN + + + P ++ + C + + + Y+W
Sbjct: 405 CLATNF------------VWARTRITRPPQDQSVIKGTQASMVCGVAHDPRVTIRYVWEK 452
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G + +P + +D G L IT D G Y C V S G S + V
Sbjct: 453 DGAALGVEN-----SPRVRLDKNGSLHITQTWSGDIGTYTCRVLSAGGNDSRSAHLRVRQ 507
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + + + + W P+ Y + N N+ W V+
Sbjct: 508 LPHAPEHPVATLSASERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW-----AVLLAS 561
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 562 VD---PEATSVVVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 618
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 619 SGRTNQSIMIQWQPPPENHQNGLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 678
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 679 -----WTNYEIEVAAYNSAGLGVYSGKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 733
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 734 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 791
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT P P + I T++ V+W+ P + + GY+
Sbjct: 792 CFTTPGDGPRSSPQLVRTLEDVP-GPVGHLSFSDILDTSLKVSWQ--EPGEKNGILTGYR 848
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
+ E ++ +R + V TL+ + L+ Y + V A + G G+ P
Sbjct: 849 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTAKGQGQSCLP 901
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 166/405 (40%), Gaps = 62/405 (15%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PP P V+ +V S + W G+ P+ +Y + R + W S V
Sbjct: 1315 PPSKPV-VRQEDVKARSVLLSWEPGSDGLSPVRYYSVQTRELPSGRWALHSASV------ 1367
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
+ A + + L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1368 --SHNASACVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDEAPTIVSVTP 1425
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ I W+P +K N + ++I +R+ + TL+ N G + S F
Sbjct: 1426 HTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGARWTELTSLFS 1485
Query: 359 -------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
+ YE+++ N VG GP S +F E +P +AP+ V
Sbjct: 1486 MRNLSRPSLTQYELDNLNKHRRYEIRMTVYNAVGEGPLSAPQEVFVGEAVPTMAPRNVAV 1545
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G +T ++VTW P L +N G + G++ L
Sbjct: 1546 HGPTATQLDVTWEPPPLESQN--GDIQGYK----------------------------NL 1575
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
T Y V V A+N AGEGP S +T + AP PS+V + T+V+V+W +P
Sbjct: 1576 TGYTTYMVSVAAFNAAGEGPRSTPTRGQTQQAAPSA-PSSVKFSELTTTSVNVSWE--AP 1632
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564
F + GY++ V+E + A D + +T + +PG
Sbjct: 1633 QFPNGVLEGYRL-VYEPCTPVDDATDALTQRKDTRTLGDMHKAPG 1676
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 161/366 (43%), Gaps = 36/366 (9%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKE 236
PG P + + + S T+Q+ G I+ + + A+ W V H + E
Sbjct: 906 PGAPTNLGISNIGPRSVTLQFKPGYDGKTSISRWLVEAQVGVVGEGEEWLLV--HQLTNE 963
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
D + + + L P++ Y F++ N +G PS PS + T P AP+ +
Sbjct: 964 PDA----RSMEVPD-LNPFTHYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTL 1018
Query: 297 GGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV--R 352
L + W PLP + N ++ YKI + + + +G V VV R
Sbjct: 1019 RTASETSLWLRWTPLPEMEYNGNPESVGYKIKYSRADG----------HGRVLSHVVLDR 1068
Query: 353 IPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ E+ +TEY V+VQA N +G GP S++V + E +P P V + S++
Sbjct: 1069 VEREYTIEDLEEWTEYRVQVQAFNAIGNGPWSQMVMGRTRESVPSSGPTNVSALATTSSS 1128
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ V W+P+ N G L+G+++ Y ++D+ + V+ + + GL Y
Sbjct: 1129 MLVRWSPVPEAERN--GLLLGYKVLYREKDSDPQPRVWLVEGNASLSVQLTGLGKYVLYE 1186
Query: 467 VKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
V+V+A+ G+G P LERT P PP + + T+V + W+ P+
Sbjct: 1187 VQVLAFTRIGDGSPSRPPVLERTLDDVP-GPPMGILFPEVRTTSVRLVWQ--PPAAPNGI 1243
Query: 526 IIGYKV 531
I+ Y++
Sbjct: 1244 ILAYQI 1249
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 362 YEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y+ ++ A+NDVG G ++E V++ E+ P PQ V + G + +I + W P
Sbjct: 580 YQFRLCAVNDVGKGQFSKDTERVSL--PEEPPTAPPQNVIASGRTNQSIMIQWQPPPENH 637
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
+N G L G+ I+Y P ++ N L+ L T Y ++V AYN+AG G
Sbjct: 638 QN--GLLKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYEIEVAAYNSAGLG 695
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S + E T + P PP VH + N TT+ TW SP F GYK+ WE +Q
Sbjct: 696 VYSGKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNAPSPQFINGINQGYKLIAWEPEQ 755
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKR----YHMRVLAFSNGGDGRMSSPAI 587
+ T P N D+ V G + Y VL F+ GDG SSP +
Sbjct: 756 EEEVTMVTARP--NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPGDGPRSSPQL 806
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 200/480 (41%), Gaps = 40/480 (8%)
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ 187
D +E P++N T+ SF + V S + S K + P P V
Sbjct: 965 DARSMEVPDLN------PFTHYSF-RMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVT 1017
Query: 188 VVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ +TS ++WT + NG P + YKI +R + + V HV+ V+R
Sbjct: 1018 LRTASETSLWLRWTPLPEMEYNGNPESVGYKIKYSRADGHG---RVLSHVVLDRVER--- 1071
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E +IE+ L W+ Y +V A N +G G P S T P P+ +
Sbjct: 1072 --EYTIED-LEEWTEYRVQVQAFNAIGNG-PWSQMVMGRTRESVPSSGPTNVSALATTSS 1127
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+ + W P+P ++N + YK+ +R+K D++ Q GN ++V ++ Y Y
Sbjct: 1128 SMLVRWSPVPEAERNGLLLGYKVLYREK-DSDPQPRVWLVEGNASLSV-QLTGLGKYVLY 1185
Query: 363 EVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
EV+V A +G G P V + +D+P P G+ +T++ + W P I
Sbjct: 1186 EVQVLAFTRIGDGSPSRPPVLERTLDDVPG-PPMGILFPEVRTTSVRLVWQPPAAPNGII 1244
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
I HR+ + +V L+ + R + GL+P++ Y ++ A G G +
Sbjct: 1245 LAYQITHRLNATTANT---ASVEVLAPSARQYT-ATGLKPESVYLFRITAQTRKGWGEAA 1300
Query: 482 ERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1301 EALVVTTEKRDRPQPPSKPVVRQEDVKARSVLLSWEPGSDGL--SPVRYYSVQTRELPS- 1357
Query: 540 MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRM---SSPAITFQMGEEK 595
R V + A +VD L P Y RV A ++ GD S P T Q ++
Sbjct: 1358 -GRWALHSASVSHNASACVVDRLKPFTSYKFRVKATNDIGDSEFSEESEPLTTLQAAPDE 1416
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 149/379 (39%), Gaps = 47/379 (12%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P G+ EV TS + W A I Y+I R N +T S V+ +
Sbjct: 1214 PGPPMGILFPEVRTTSVRLVWQPPAAPNGIILAYQITHRLN-ATTANTASVEVLAPSARQ 1272
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR--IGGG 297
YT L P S Y F++ A G+GE + D+P Q PS+ +
Sbjct: 1273 YTATG-------LKPESVYLFRITAQTRKGWGEAAEALVVTTEKRDRP-QPPSKPVVRQE 1324
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
K + +SWEP +P YY + R+ + + N VV F
Sbjct: 1325 DVKARSVLLSWEP--GSDGLSPVRYYSVQTRELPSGRWALHSASVSHNASACVVDRLKPF 1382
Query: 358 YYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
T Y+ +V+A ND+G ESE +T A P AP V +T++ + W P
Sbjct: 1383 --TSYKFRVKATNDIGDSEFSEESEPLTTLQA--APDEAPTIVSVTPHTTTSVLIRWQPP 1438
Query: 415 ELIRENIRGRLIGHRIKYWKE-------------DNP-----EETAVYY---LSRTTRNW 453
+ I G L+G RI+Y + +NP E T+++ LSR +
Sbjct: 1439 A--EDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGARWTELTSLFSMRNLSRPSLTQ 1496
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L +Y +++ YN GEGP S P P V + G T + VT
Sbjct: 1497 YELDNLNKHRRYEIRMTVYNAVGEGPLSAPQEVFVGEAVPTMAPRNVAVHGPTATQLDVT 1556
Query: 514 WRYVSPSFEEE--PIIGYK 530
W P E + I GYK
Sbjct: 1557 WE--PPPLESQNGDIQGYK 1573
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 256 VDIPCRAKGVPPPSITWYKDAAVVEVARLSRFRQRGDGGLQISGLVPDDTGMFQCYARNS 315
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 316 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 371
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTV 165
+ ++ P ++ G L ++ A +DAG Y C+ + V
Sbjct: 372 -LASGSVQLPRFTLLESGSLLVSPARISDAGTYTCLATNFV 411
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 104/283 (36%), Gaps = 41/283 (14%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 57 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 116
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + + C A+ L+
Sbjct: 117 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIK 176
Query: 113 VAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGK 167
+ +W +GV + G D N L I N + +DAG YEC + S+V
Sbjct: 177 LHILWKKDGVLLSGGISDYNR-----------RLTIPNPTGSDAGFYECEAVLRSSSVPS 225
Query: 168 ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227
+ + V PP V+ E H T+ + D + + I TW+
Sbjct: 226 VVRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYK 274
Query: 228 VSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V + R+ R + ++ + LVP T F+ A N G
Sbjct: 275 DAAVVEVARLSRFRQRGDGGLQISGLVPDDTGMFQCYARNSAG 317
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 14/174 (8%)
Query: 8 VTIFCNPEAAP--KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
VT+ C A P K +WKKDG ++ SGG N L I + D+G Y C A
Sbjct: 163 VTMECVANARPLIKLHILWKKDG-VLLSGGISDY--NRRLTIPNPTGSDAGFYECEAVLR 219
Query: 66 HGMDESKGR---LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
S R L VL P + ++ IT + + + C A + + + W +
Sbjct: 220 SSSVPSVVRGAYLSVLEPPQFVKEPERHITAEMEKVVDIPCRA--KGVPPPSITWYKDAA 277
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ L+ DGGL +I+ D G ++C +++ G++ T T + V
Sbjct: 278 VVEVARLSRFRQRG---DGGL-QISGLVPDDTGMFQCYARNSAGEVQTSTYLAV 327
>gi|237858643|ref|NP_001153793.1| neurofascin isoform 5 precursor [Gallus gallus]
Length = 1069
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 51/440 (11%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 453 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 511
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 512 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 570
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 571 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 621
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 622 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 677
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 678 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 731
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 732 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 788
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED+P +P+ + R N +IN+ W+
Sbjct: 789 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPS-SPRYLRIRQPNLESINLEWD 844
Query: 413 PIELIRENIRGRLIGHRIKY 432
E+ G L G+ ++Y
Sbjct: 845 ----HPEHPNGVLTGYNLRY 860
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 146/630 (23%), Positives = 238/630 (37%), Gaps = 109/630 (17%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD----DSGIY 58
GE G + C PKP W +G I E I V RD S +Y
Sbjct: 352 GEDGR--LVCRANGNPKPSIQWLVNGEPIEGSPPNPSREVAGDTI--VFRDTQIGSSAVY 407
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-- 116
C A+N HG + + VL +PP+I A RN ++ + LD +
Sbjct: 408 QCNASNEHGYLLANAFVSVL-------DVPPRIL--APRNQLIKVIQYNRTRLDCPFFGS 458
Query: 117 ------WTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIS 169
W NG GNM L+ N + G LE++ A D G Y CV + +GK+
Sbjct: 459 PIPTLRWFKNGQ--GNM----LDGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKVE 512
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKII--ARTNWNSTWFN 227
+ + V+ P + G + V + S P H ++ TW
Sbjct: 513 AQVRLEVKDPTRIVRGPEDQVVKRGSM------------PRLHCRVKHDPTLKLTVTW-- 558
Query: 228 VSEHVIGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELGYGEPSSPSPQYNT 282
+ + Y G + ++ L + E + +A EL +
Sbjct: 559 -----LKDDAPLYIGNRMKKEDDGLTIYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAI 613
Query: 283 PA----DKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKNDT 333
PA D P + P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 614 PANRLRDLPKERPDR--PRDLELSDLAERSVKLTW--IPGDDNNSPITDYIVQFE---ED 666
Query: 334 EFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSA 386
FQ T + GNV A++ + Y Y+ +V A+NDVG P SE A
Sbjct: 667 RFQPGTWHNHSRYPGNVNSALLSLSP---YVNYQFRVIAVNDVGSSLPSMPSERYQTSGA 723
Query: 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY---WKEDNPEETAV 443
P++ P GV G + +TW P+ + G ++Y W+ +P +
Sbjct: 724 R--PEINPTGVQGAGTQKNNMEITWTPLNATQA------YGPNLRYIVRWRRRDPRGS-- 773
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T + +V P Y +KV A N+ G PE E Y+ + P P + I
Sbjct: 774 -WYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPETYIGYSGEDLPSS-PRYLRI 831
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP--VGNTLDADIVD 560
+ N ++++ W + P + GY +R + S+ T++ N +
Sbjct: 832 RQPNLESINLEWDH--PEHPNGVLTGYNLRYQAFNG--SKTGRTLVENFSPNQTRFTVQR 887
Query: 561 LSPGKRYHMRVLAFSNGGDGRM---SSPAI 587
P RY + A + GDG + SPA+
Sbjct: 888 TDPISRYRFFLRARTQVGDGEVIVEESPAL 917
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 262 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 321
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 322 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 378
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
N P+ + G + + + Y+C + G + V +++ PP
Sbjct: 379 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPP 431
>gi|307186116|gb|EFN71841.1| Down syndrome cell adhesion molecule [Camponotus floridanus]
Length = 1719
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 152/618 (24%), Positives = 259/618 (41%), Gaps = 52/618 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDS 55
G + + C + P P W + + GS GR I NG+L + S D
Sbjct: 492 GNPLNVHCEAKGFPPPHITWLRAKGKMSNDYQPLVDGSDGRLTILPNGSLWTASASPQDE 551
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C A N G SK + +H P+ +E +TI ++ + C+ + ++V
Sbjct: 552 GQYLCRANNGIGSGLSKVIYVSVHEPARFEFQSENVTIRRGESVTIDCTVIGDNPIEVQ- 610
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKT 172
W HN R+ +M + L I D GL L I N+ D+G Y C + G+
Sbjct: 611 -WMHNSDRL-DMSNHRLSIGQIKTDNGLKSQLSIANSDRQDSGVYRCTADNAYGRSEHLI 668
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART-------NWN--- 222
+ V+ P P G++V+E+ S + W PI +Y I R+ +WN
Sbjct: 669 YLAVQERPDPPAGLEVIEIGSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVK 728
Query: 223 ---------STWFNVSEHVIGKEVDRY--TG-RKEASIENVLVPWSTYEFKVIAGNELGY 270
S+ S H ++ + TG +E ++ L P TY F++ A N +
Sbjct: 729 THNVTYTPGSSNSGNSIHPTQNDLSPFETTGDDQEVALIGGLHPAVTYTFRIFAINSIDA 788
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
P+ P T + P ++P I G+L +SW+P P+E N + Y + W +
Sbjct: 789 SGPTEPV-VAKTQEEAPTESPQNIKVQPAGPGELMVSWQPPPKESCNGDLLGYIVTWSEH 847
Query: 331 NDTEF---QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ + QS++L G V++ +T+Y++ ++A N + GP S + + E
Sbjct: 848 SSSTSGVNQSKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPASVPIVGTTQE 906
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW--KEDNPEETAVYY 445
+P+ P V +S ++ V+WN + G + G+++ Y DN + + +
Sbjct: 907 GVPETPPTQVTCVPLSSQSVKVSWNAPPPHQHG--GIIQGYKVYYRPVPTDNMDISTLGE 964
Query: 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 505
+ RT+ + L T Y +KV+AY AG+G S T P PP+ + +
Sbjct: 965 VKRTSSMETYLHTLYKYTNYSIKVLAYTGAGDGALSPPIFCMTEEDVP-GPPAGIKALAL 1023
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP---VGNTLDADIVDLS 562
++ V+W + P + Y V E + A+ P +TL ++ DL
Sbjct: 1024 TAESILVSW--LPPLQPNGNVSKYTVYSREAGSNNHNAHTMHEPPLSPTDTLTMELRDLV 1081
Query: 563 PGKRYHMRVLAFSNGGDG 580
K Y V A + G+G
Sbjct: 1082 ERKSYEFWVSATTGLGEG 1099
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
Y ++ AIN + +E V + E+ P +PQ + + + V+W P +E+
Sbjct: 776 YTFRIFAINSIDASGPTEPVVAKTQEEAPTESPQNIKVQPAGPGELMVSWQPPP--KESC 833
Query: 422 RGRLIGHRIKYWKEDNPEETAV-YYLSRTTRNWAL----IVGLQPDTKYYVKVMAYNNAG 476
G L+G+ I W E + + V S T WA + GL+ TKY + + A+N+
Sbjct: 834 NGDLLGY-IVTWSEHSSSTSGVNQSKSLTVNGWATTKVQLTGLRKFTKYDISIRAFNSIA 892
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
GP S + T P+ PP+ V ++ +V V+W P I GYKV V
Sbjct: 893 SGPASVPIVGTTQEGVPETPPTQVTCVPLSSQSVKVSWNAPPPHQHGGIIQGYKVYYRPV 952
Query: 537 DQD-MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594
D M + + ++++ + L Y ++VLA++ GDG +S P F M EE
Sbjct: 953 PTDNMDISTLGEVKRTSSMETYLHTLYKYTNYSIKVLAYTGAGDGALSPP--IFCMTEE 1009
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGR----RKIFENGNLL----ISPVSRD 53
G V++ C+ +P P F W DG + I +G R + + ++G+++ IS +
Sbjct: 297 GPPVSLRCSATGSPTPSFTWLLDGEPLSQIATGHRYAIGQYVDQSGDVISHLNISSAGTE 356
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y+C A+N E K RL + +GP + Q+ CS + + L +
Sbjct: 357 DGGLYACVASNTLATVEHKARLNI-YGPPVMTPFSFPPSSQEGSRAQVTCSVTSGD-LPI 414
Query: 114 AYIWTHNGVRI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W +G + ++ + E N+ L S +G+Y CV ++ K++
Sbjct: 415 YISWLKDGEPLPSSLRIEERGAEFFNV----LVFKELSSRHSGKYTCVATNSAAKVNHTA 470
Query: 173 TVIVEGPP 180
++V+ PP
Sbjct: 471 ELLVKVPP 478
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFENGNLL-ISPVSRDDSG 56
A G +V + C+ + +P P+F W +D N + S GR +++ G+L+ I V D+G
Sbjct: 108 AESGSDVHLTCSAQGSPPPQFTWYRDVNGHSIPVESFGRIQLW--GDLMQIRRVDAQDAG 165
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAY 115
Y C A+N G ++ L V ++ P++ + + + C+ + V
Sbjct: 166 RYVCRASNHLGEQRAETHLSVTS--KLNARIQPRVQVVNSGETATMNCTVEGYPVESVE- 222
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
W H+GV + L +T + +L I + D G Y+C+V+S
Sbjct: 223 -WLHDGVPV----LTAQDTRIRLLAPLVLVIGSVGRRDKGMYQCLVRS 265
>gi|410898986|ref|XP_003962978.1| PREDICTED: neural cell adhesion molecule L1-like [Takifugu rubripes]
Length = 1258
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 149/613 (24%), Positives = 268/613 (43%), Gaps = 77/613 (12%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
EG N+ + C +P+P + +IF+ V DD+G+YSC+
Sbjct: 429 EGRNILMDCEVFGSPRPHIT------CCYHTRKTQIFDLC------VDHDDAGVYSCSVK 476
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGV 122
H + S + ++ + P + N L C +T+ L A + W +G
Sbjct: 477 --HNNNVSINAHLEVYNRTVIPAPPQNLRFLRGTNALLTCGFYTDPRLPPAQVVWRRDGH 534
Query: 123 RI-GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++ G+ N+ + G L+++N F D+ +Y C V S + + ++ V P
Sbjct: 535 KLMGSETANKYSV----FEDGTLKVSNIQFNDSAQYSCEVISLLDHVKAMGSITVVDRPD 590
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P + + EV + T+ WT G+ + P+ + + F +H GK+
Sbjct: 591 PPKYLSLAEVTDHNLTLNWTPGSAHNSPMIDFIV---------EFREEQHTEGKKWKWEE 641
Query: 242 GRK-EASIENV---LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+K A +++V L P+ TY F+VIA NE+G +PS PS Y T P + P+ +
Sbjct: 642 MKKVPADVQHVQLSLRPFCTYRFRVIAVNEVGRSDPSEPSDTYRTSPAVPDRNPTGVRSE 701
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWR--KKNDTEFQSETLKEYGNVGIAVVRIPS 355
L I+W+ + + N Y++ WR +K D + S +K + +
Sbjct: 702 SADPDSLVITWDEMDKMYHNGHGFLYEVSWREARKRDARWNSAEVKS------PPFLVQN 755
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
YT +E+KV+A+N +G GP E S ED P P GV + NST + V W+
Sbjct: 756 TGTYTPFEIKVKAVNSLGSGPAPEPEIGHSGEDKPAEPPTGVKTTVINST-VTVKWD--- 811
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYL----------SRTTR-----------NWA 454
+++RG L+G++I + P E L R+ R A
Sbjct: 812 -AAQDVRGLLLGYKIHILRLGPPTERHRRSLEKLHQEEDRDERSKRGKERRLVVVRETSA 870
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ GL+ + Y + V AYN+ GEGP S+ + T AP PP+++ ++ + T+V + W
Sbjct: 871 EVTGLRLFSLYELSVTAYNSKGEGPHSDPHRFSTPEGAP-GPPASLRLQSPSETSVILYW 929
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQ----DMSRANDTIIPV---GNTLDADIVDLSPGKRY 567
P+ ++GY ++ + + D +++++ + + ++ L P Y
Sbjct: 930 --APPTEANGILLGYVIQHKQGNSCHRGDAGANSESLLQMISDPSVTHFELHHLDPNSYY 987
Query: 568 HMRVLAFSNGGDG 580
+V+A++ G+G
Sbjct: 988 IFKVIAYTAAGEG 1000
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 8/182 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G VT+ C P+ P PK WKK +G + N + +D G Y C
Sbjct: 243 ALRGHKVTLECIPKGLPTPKVEWKKKDGRLGETSGQLDKHNRWFHFESIGLNDDGEYECK 302
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N HG + V P Y+ + P + ++L C A E + + W+ NG
Sbjct: 303 AWNSHGFTTHSFTVTVEAAP-YWVKKPASQLYSPGETVRLDCQA--EGIPTPSITWSING 359
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
I ++ E P ++ GG+L + + FAD Y+C + G T + +VE PP
Sbjct: 360 RNITEVE----EEPRRSVSGGVLILRDVVFADTAVYQCEATNKHGSALLNTFLHVVELPP 415
Query: 181 GL 182
+
Sbjct: 416 QI 417
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 37/308 (12%)
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTE 361
+L+++W P N+P I + + +R++ TE + +E V V + +
Sbjct: 604 NLTLNW--TPGSAHNSPMIDFIVEFREEQHTEGKKWKWEEMKKVPADVQHVQLSLRPFCT 661
Query: 362 YEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y +V A+N+VG SE + ++ +P P GV S + ++ +TW+ ++ + N
Sbjct: 662 YRFRVIAVNEVGRSDPSEPSDTYRTSPAVPDRNPTGVRSESADPDSLVITWDEMDKMYHN 721
Query: 421 IRGRLIGHRIKY---WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GH Y W+E + A + + L+ T + +KV A N+ G
Sbjct: 722 ------GHGFLYEVSWREARKRD-ARWNSAEVKSPPFLVQNTGTYTPFEIKVKAVNSLGS 774
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV- 536
GP E + + P +PP+ V IN T VT ++ + ++GYK+ + +
Sbjct: 775 GPAPEPEIGHSGEDKPAEPPTGVKTTVINST---VTVKWDAAQDVRGLLLGYKIHILRLG 831
Query: 537 -------------------DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG 577
D+ R + + V A++ L Y + V A+++
Sbjct: 832 PPTERHRRSLEKLHQEEDRDERSKRGKERRLVVVRETSAEVTGLRLFSLYELSVTAYNSK 891
Query: 578 GDGRMSSP 585
G+G S P
Sbjct: 892 GEGPHSDP 899
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 36/252 (14%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQY-NTPADKPYQAPSRIG------------GGGGKI 301
++ +E KV A N LG G +P P+ ++ DKP + P+ + +
Sbjct: 759 YTPFEIKVKAVNSLGSG--PAPEPEIGHSGEDKPAEPPTGVKTTVINSTVTVKWDAAQDV 816
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE----- 356
L + ++ + + P ++ K + E + E K + VVR S
Sbjct: 817 RGLLLGYK-IHILRLGPPTERHRRSLEKLHQEEDRDERSKRGKERRLVVVRETSAEVTGL 875
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
++ YE+ V A N G GP S+ + E P P + + + T++ + W P
Sbjct: 876 RLFSLYELSVTAYNSKGEGPHSDPHRFSTPEGAPG-PPASLRLQSPSETSVILYWAP--- 931
Query: 417 IRENIRGRLIGHRIKYWKEDNP---------EETAVYYLSRTTRNWALIVGLQPDTKYYV 467
G L+G+ I++ K+ N E+ + +S + + L P++ Y
Sbjct: 932 -PTEANGILLGYVIQH-KQGNSCHRGDAGANSESLLQMISDPSVTHFELHHLDPNSYYIF 989
Query: 468 KVMAYNNAGEGP 479
KV+AY AGEGP
Sbjct: 990 KVIAYTAAGEGP 1001
>gi|194218739|ref|XP_001492769.2| PREDICTED: protein sidekick-1 [Equus caballus]
Length = 2113
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 237/556 (42%), Gaps = 37/556 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP +WK+ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 398 DGMTAILKCEVSGAPKPAIMWKRGNHILASGSVRIPRFMLLESGGLQITPVFIQDAGNYT 457
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S ++ I L C A + + + Y+W
Sbjct: 458 CYAANTEGSLNASAALTVWNRTSIINPPEDRVVIKG-TTATLDCGATHDPRISLRYVWKK 516
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 517 DNVVITPSSSSRIV---VEKDGSLL-ISQTWSGDIGDYTCEIISEGGNDSRMARLEVIEL 572
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + H + + W P+ +Y I+ + NS W V +G E+
Sbjct: 573 PHSPQNLLASLNSAHSHTVMLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSNVGPEM 630
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
R L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 631 TGVAVRG-------LTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 683
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 684 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTEL 740
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 741 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTIQFLWNPPP- 799
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE + V ++ + I L+ T Y V+ +
Sbjct: 800 -QQFINGINQGYKLLAWPADVPEASTVVTIAPDFHGVHHGYITNLKKFTAYLTSVLCFTT 858
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P + I GY++
Sbjct: 859 PGDGPPSAPQLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGVITGYQIS 913
Query: 533 VWEV-DQDMSRANDTI 547
WEV ++ SR T+
Sbjct: 914 -WEVYGKNDSRLTRTL 928
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 45/352 (12%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
EV S +QW G+ PI ++ + + R W + ++S EV+R
Sbjct: 1394 EVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACEVER------ 1447
Query: 246 ASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305
L P+++Y+ ++ A N++G + S + T D P + PS I +
Sbjct: 1448 ------LRPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSFISVTPHTTSSVL 1501
Query: 306 ISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EYGNVGIA 349
I W+P E N Y+I++R+ + + +S+TLK + V +
Sbjct: 1502 IQWQPPRDESLNGLLQGYRIYYRELEYEAASATESKTLKTPSALRAELTAQSSFKTVNSS 1561
Query: 350 VVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
E Y YEV + A N +G P S V +F E P +APQ V ++
Sbjct: 1562 STLTTYELTHLRKYRRYEVVMTAYNIIGESPASAPVEVFVGEAAPALAPQNVQVNPLTAS 1621
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET---AVYYLSRTTRNWALIVGLQPD 462
+ VTW+P +N G + G++I YW+ D+ ET V +L T + L
Sbjct: 1622 QLEVTWDPPPPESQN--GNIQGYKIYYWEADSRNETEKMKVLFLPETAVK---LKNLTSH 1676
Query: 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
TKY V + A+N AG+GP+S+ T+ AP PS + I TT++V+W
Sbjct: 1677 TKYLVSISAFNAAGDGPKSDPRQGHTHEAAPGT-PSFLAFSEITSTTLNVSW 1727
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 188/435 (43%), Gaps = 54/435 (12%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226
T +T+ PP LPG + + + SAT+Q+ G I+ + I +
Sbjct: 962 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIIEGQVG------ 1015
Query: 227 NVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1016 -----AIGDEEEWVSLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRV 1070
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ 336
T P AP+ + L + W PLP + N ++ Y+I +WR + Q
Sbjct: 1071 IQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRP----DLQ 1126
Query: 337 SETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390
S L + N R+ EF +TEYE+++QA N +G GP SEVV + E +P
Sbjct: 1127 SPALTQVIND-----RLEREFTIEELEEWTEYELQMQAFNAIGAGPWSEVVRGRTRESVP 1181
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1182 SAAPENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHVVRGNH 1239
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTT 509
AL+ GL+ Y ++V+A+ G G P S LERT AP PP + + T+
Sbjct: 1240 TQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPLVLERTKDDAP-GPPVRLVFPEVRLTS 1298
Query: 510 VHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGK 565
V + W+ EEP I+GY++ S T + VG T+ +L+P
Sbjct: 1299 VRIVWQP-----PEEPNGIILGYQIAYRLASS--SPNTFTTVEVGATVRQFTATELAPES 1351
Query: 566 RYHMRVLAFSNGGDG 580
Y R+ A + G G
Sbjct: 1352 AYIFRLSAKTRQGWG 1366
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP+ YT Y +++ +N VG P S+ + + + P VAP + R + T++
Sbjct: 1037 MLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLR 1096
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKED--NPEETAVYYLSRTTRNWALIVGLQPDTKYY 466
+ W P+ + N +G+RIKYW+ D +P T V R R + I L+ T+Y
Sbjct: 1097 LRWVPLPDSQYNGNPESVGYRIKYWRPDLQSPALTQVIN-DRLEREFT-IEELEEWTEYE 1154
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+++ A+N G GP SE RT P P V + ++ T + +TW V + I
Sbjct: 1155 LQMQAFNAIGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLI 1214
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
+GYK+ D D ++ +T A + L Y ++VLAF+ G+G SSP
Sbjct: 1215 LGYKILFRAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSPL 1273
Query: 587 I 587
+
Sbjct: 1274 V 1274
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 99/228 (43%), Gaps = 4/228 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 644 YQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPETEHN 703
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E ++ N+ L+ L T+Y ++V AYN AG G
Sbjct: 704 --GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTELIIWTQYEIQVAAYNGAGLGVF 761
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V + +N TT+ W F GYK+ W D
Sbjct: 762 SRAVTEYTLQGVPTAPPQNVQAEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPADVPE 821
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ TI P + + I +L Y VL F+ GDG S+P +
Sbjct: 822 ASTVVTIAPDFHGVHHGYITNLKKFTAYLTSVLCFTTPGDGPPSAPQL 869
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 183/463 (39%), Gaps = 53/463 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1283 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1340
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1341 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1392
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + V R+
Sbjct: 1393 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEATACEVERLRP-- 1450
Query: 358 YYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P + ++++ + W P
Sbjct: 1451 -FTSYKLRLKATNDIGDSDFSVETEAVTTL--QDVPGEPPSFISVTPHTTSSVLIQWQPP 1507
Query: 415 ELIRENIRGRLIGHRIKYWKED------------------NPEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + + E TA + L
Sbjct: 1508 R--DESLNGLLQGYRIYYRELEYEAASATESKTLKTPSALRAELTAQSSFKTVNSSSTLT 1565
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1566 TYELTHLRKYRRYEVVMTAYNIIGESPASAPVEVFVGEAAPALAPQNVQVNPLTASQLEV 1625
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYK+ WE D ++ + T + +L+ +Y + +
Sbjct: 1626 TWDPPPPESQNGNIQGYKIYYWEADSRNETEKMKVLFLPETA-VKLKNLTSHTKYLVSIS 1684
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
AF+ GDG S P + G E G+P+ + STTL
Sbjct: 1685 AFNAAGDGPKSDP----RQGHTHEAAPGTPSFLAFSEITSTTL 1723
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 16/176 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD I R K+ +G L I + +DSGI+ C ATN
Sbjct: 309 VDIVCQAMGVPLPTLQWYKDAISISKLQNPRYKVLSSGGLRIQKLRPEDSGIFQCFATNE 368
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHN 120
G ++ L V + + QLP T+ L+C + +I
Sbjct: 369 GGEIQTHTYLDVTNVAPAFTQLPVDTTVTDGMTAILKCEVSGAPKPAIMWKRGNHILASG 428
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+IT DAG Y C +T G ++ + V
Sbjct: 429 SVRIPRFML---------LESGGLQITPVFIQDAGNYTCYAANTEGSLNASAALTV 475
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P + V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1805 EGSPGAPRHISVTKA-ASELTLQWTEGDAGKAPTTGYVIEARPSDEGLW-----DMFAKD 1858
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A N++GYGEPS PS + + P+
Sbjct: 1859 IPRSATSYTVSLDR-LRQGVTYEFRVVAVNQVGYGEPSRPSTAVSAQVETPF 1909
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 205/491 (41%), Gaps = 40/491 (8%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P + V +T
Sbjct: 1034 DAQMLEIPNLTPYTHYRFRMRQVNIVGASPFSQSSRVIQTLQAPPDVAPTSLTVRTASET 1093
Query: 195 SATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y+I R + S VI ++R E +IE
Sbjct: 1094 SLRLRWVPLPDSQYNGNPESVGYRIKYWRPDLQSPALT---QVINDRLER-----EFTIE 1145
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1146 ELEEW-TEYELQMQAFNAIGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1203
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1204 SVPEQDQNGLILGYKILFRAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVLYELQVLA 1260
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S +V + +D P + VF T++ + W P E G ++G
Sbjct: 1261 FTRIGNGVPSSPLVLERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1315
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1316 YQIAYRLASSSPNTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVI 1374
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + V+V E+ + + +
Sbjct: 1375 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSS 1434
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS--SPAITFQM---GEEKEFKSGS 601
I T ++ L P Y +R+ A ++ GD S + A+T GE F S +
Sbjct: 1435 SISHEAT-ACEVERLRPFTSYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPSFISVT 1493
Query: 602 PALYSASTTLL 612
P ++ S+ L+
Sbjct: 1494 P--HTTSSVLI 1502
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + DSG Y A N + L
Sbjct: 122 SCPRPQVTWFREGHKIIPSNRIAITLENQLVILAAAASDSGPYYVQAVNERNGENKTSPL 181
Query: 76 IVL---HGPSYYEQLPPKITI--------AAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
I L E + P I I A + L C A+ + D++ W NGVRI
Sbjct: 182 IYLSVARDVGTPETMAPVIVITPGNRSVVAGSSEVTLECIANARPVEDLSVSWKRNGVRI 241
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + +D G Y C
Sbjct: 242 ---------TSGLHSFGRHLTISNPTSSDTGVYVC 267
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
Query: 8 VTIFCNPEAAPKPKFV--WKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCT 61
VT+ C A P WK++G I SG GR +L IS + D+G+Y C
Sbjct: 216 VTLECIANARPVEDLSVSWKRNGVRITSGLHSFGR-------HLTISNPTSSDTGVYVCE 268
Query: 62 AT---NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
AT + +K L ++ P + + +I + + + C A L + W
Sbjct: 269 ATLRGSAFEPARAKAFLSIIEPPYFTAEPESRILVEVEETVDIVCQAMGVPLPTLQ--WY 326
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ + I ++L+ P + G L I D+G ++C + G+I T T
Sbjct: 327 KDAISI-----SKLQNPRYKVLSSGGLRIQKLRPEDSGIFQCFATNEGGEIQTHT 376
>gi|345482787|ref|XP_001599258.2| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Nasonia vitripennis]
Length = 1933
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 155/608 (25%), Positives = 265/608 (43%), Gaps = 58/608 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKD-GNIIGSGGRRKI------FENGNLLISPVSRDDS 55
+G + + C + PKP+ WK+ G+ G K+ E+G L+I+ + + +
Sbjct: 695 AQGSDARVECKADGFPKPQVTWKRAAGDTPGDYTDLKLNNPDISVEDGTLMINNIQKTNE 754
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C A N G S LI + P ++E T L+C A E+ + +
Sbjct: 755 GYYLCEAVNGIGSGLSAVILISVQAPPHFEIKLRNQTARRGEPAVLQCEAQGEKPIGI-- 812
Query: 116 IWTHNGVRIG-NMDLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKT 172
+W N R+ D I +G L L I +D+ + CV + G T
Sbjct: 813 LWNMNNKRLDPKSDSRYTIREEIMGNGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSI 872
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVS 229
+IV+ P +P G++V++ S + W PI Y I I++ +W
Sbjct: 873 NMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSW-------- 924
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
E I + V + + A + N L P +TY +++A NE+G EPS + T + P
Sbjct: 925 ETDIDRVVVPGSQQNVAGVFN-LKPATTYHLRIVAENEIGVSEPSD-TVTIITAEEAPSG 982
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT---------EFQSETL 340
PS + L +SW+P R+ N + Y + +R + + EF E
Sbjct: 983 PPSSVRVDALDQHTLKVSWKPPARDDWNGEILGYYVGYRLASSSDKPYMFETVEFSKEDG 1042
Query: 341 KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
KE+ ++I + YT+Y V VQA N VG GP SE +AE +P+ P
Sbjct: 1043 KEHH------LQIMNLKTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCT 1096
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-----WKEDNPEETAVYYLSRTTRNWAL 455
S I V+W+ L N G + G++I Y W ++N ++T + S T +
Sbjct: 1097 TLTSQTIRVSWSSPPLSAAN--GVITGYKIIYGPSESWHDENTKDTKITSSSET-----I 1149
Query: 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+ GL+ T Y ++++A+ + G+G +S +T + AP+ P+A+ ++ ++ V+WR
Sbjct: 1150 LHGLKKFTNYSMQILAFTSGGDGVKSAPIHCQTEQDAPEA-PTAIKALVMSADSILVSWR 1208
Query: 516 YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
P + +I + + + + P L ++ LS +RY V A +
Sbjct: 1209 ---PPTQPNGVISQYTVYTKANNSEQAVSQKVPPT--QLTHEVSGLSENRRYDFWVTAST 1263
Query: 576 NGGDGRMS 583
N G+G+ S
Sbjct: 1264 NIGEGQTS 1271
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 150/639 (23%), Positives = 249/639 (38%), Gaps = 61/639 (9%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR---RKIFEN-GNLLISPVSRDDSGI 57
AGE N+ + P K W G IG +K+ + L+I ++ +G
Sbjct: 601 AGEFANLQCIVSVGDLPL-KIRWSYPGERIGGASGVLVKKVADRVSMLMIMAITAKHAGD 659
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y CTA N G L+V P + + P A + ++ C A V +
Sbjct: 660 YVCTAENAAGTASYTAELVVNVPPRWILE-PTDKAFAQGSDARVECKADGFPKPQVTWKR 718
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIV 176
DL +L P+I+++ G L I N + G Y C + +G +S + V
Sbjct: 719 AAGDTPGDYTDL-KLNNPDISVEDGTLMINNIQKTNEGYYLCEAVNGIGSGLSAVILISV 777
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ PP ++ + + + A +PI W ++ + K
Sbjct: 778 QAPPHFEIKLRNQTARRGEPAVLQCE-AQGEKPI-----------GILWNMNNKRLDPKS 825
Query: 237 VDRYTGRKEASIENVLVPWSTYE--------FKVIAGNELGYGEPSSPSPQYNTPADKPY 288
RYT R+E VL S F +A N G + S P + PY
Sbjct: 826 DSRYTIREEIMGNGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVP-EVPY 884
Query: 289 QAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKE 342
G K+ D S +SW P + N+P Y I ++ K E + +
Sbjct: 885 ---------GLKVLDKSGRSVQLSWA-APYDG-NSPIKRYVIEYKISKGSWETDIDRVVV 933
Query: 343 YG---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
G NV P+ T Y +++ A N++G S+ VTI +AE+ P P V
Sbjct: 934 PGSQQNVAGVFNLKPA----TTYHLRIVAENEIGVSEPSDTVTIITAEEAPSGPPSSVRV 989
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPE--ETAVYYLSRTTRNWA 454
+ + V+W P R++ G ++G+ + Y D P ET + +
Sbjct: 990 DALDQHTLKVSWKPPA--RDDWNGEILGYYVGYRLASSSDKPYMFETVEFSKEDGKEHHL 1047
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
I+ L+ T+Y V V A+N G GP SE + T P++PP + T+ V+W
Sbjct: 1048 QIMNLKTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTCTTLTSQTIRVSW 1107
Query: 515 RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAF 574
S I GYK+ ++ + N + ++ + + L Y M++LAF
Sbjct: 1108 SSPPLSAANGVITGYKI-IYGPSESWHDENTKDTKITSSSETILHGLKKFTNYSMQILAF 1166
Query: 575 SNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLL 613
++GGDG S+P + E + AL ++ ++L+
Sbjct: 1167 TSGGDGVKSAPIHCQTEQDAPEAPTAIKALVMSADSILV 1205
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 30/273 (10%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+V + C P P+ WK G + R + G+L I V R D+G YSC N
Sbjct: 1300 DVKLPCLAVGVPAPEVTWKVRGVKLAPTDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTF 1359
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
G D +L+V H P + Q+ +T +L ++ H + + H G+
Sbjct: 1360 GHDTVTHQLVV-HAPPHSPQV--TLTATTTNSLTMKLRPHPTDNAPIHGYTIHYKPEFGD 1416
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKS----TVGKISTKTTVIVEGP-PG 181
+ + I L+ T + Y+ V + +G+ S +G P
Sbjct: 1417 WE-------TVQISSTALKYTLENLWCGSRYQIYVTAYNAIGMGEPSDILNTRTKGSKPI 1469
Query: 182 LPGGVQVVEVHKTSATIQ---WTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+P + +EV S T+ W+DG G P+ ++ + + W VS +V
Sbjct: 1470 IPEAARFIEVSTKSITLHLHAWSDG---GCPMLYFVVEHKKKHQQEWNQVSNNV------ 1520
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
G ++ L P S Y +V A N G+
Sbjct: 1521 -KPGGNFVVMD--LDPASWYHLRVTAHNNAGFA 1550
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
AGE VT C P VW++D ++ ++K+F NG L+I V R D Y+C
Sbjct: 508 AGETLRVT--CPVAGHPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERSTDQATYTC 565
Query: 61 TATNVHGMDESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
A N G ++G L V+ P+ K+ + A L+C + L + W+
Sbjct: 566 VARNAQGY-SARGTLEVQVMETPTIQPFSFTKLPMNAGEFANLQCIVSVGD-LPLKIRWS 623
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ G RIG + + + +L I + AG+Y C ++ G S ++V
Sbjct: 624 YPGERIGGA--SGVLVKKVADRVSMLMIMAITAKHAGDYVCTAENAAGTASYTAELVVNV 681
Query: 179 PP 180
PP
Sbjct: 682 PP 683
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 25/186 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T CN + P W KDG +G E L I V +DD G+Y C N
Sbjct: 326 GRPATFTCNIKGNPIKTISWLKDGKPLG-------HEETTLRIESVKKDDKGMYQCFIRN 378
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-------NLQLRCSAHTEELLDVAYIW 117
ES L +E PP+I A H ++ L+C+A ++ W
Sbjct: 379 DQ---ESAQATAELKLGGRFE--PPQIRSAFHEETLQPGPSVYLKCTASGNPTPEIT--W 431
Query: 118 THNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTV 174
+G R+ N + ++ + ++G + L I++ D G Y+C+ S VG +
Sbjct: 432 ELDGKRLSNTERFQVGQ-YVTVNGDVVSNLNISSIHTNDGGLYKCIASSKVGSAEHSARL 490
Query: 175 IVEGPP 180
V G P
Sbjct: 491 NVYGLP 496
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 107/262 (40%), Gaps = 35/262 (13%)
Query: 117 WTHNGVRIGNMD-LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W GV++ D L +L G L I DAGEY C V++T G + ++
Sbjct: 1317 WKVRGVKLAPTDRLRQLPE-------GSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLV 1369
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V PP P V + S T++ T+ PI Y I + + W V I
Sbjct: 1370 VHAPPHSPQ-VTLTATTTNSLTMKLRPHPTDNAPIHGYTIHYKPEFGD-WETVQ---ISS 1424
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY--QAPSR 293
+YT +EN+ S Y+ V A N +G GEPS T KP +A
Sbjct: 1425 TALKYT------LENLWC-GSRYQIYVTAYNAIGMGEPSDIL-NTRTKGSKPIIPEAARF 1476
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ--SETLKEYGNVGIAVV 351
I ++ SI+ P +Y+ + +KK+ E+ S +K GN + +
Sbjct: 1477 I-----EVSTKSITLHLHAWSDGGCPMLYFVVEHKKKHQQEWNQVSNNVKPGGNF-VVMD 1530
Query: 352 RIPSEFYYTEYEVKVQAINDVG 373
P+ +Y+ ++V A N+ G
Sbjct: 1531 LDPASWYH----LRVTAHNNAG 1548
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 19/171 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----NG----NLLISPVSRDDSG 56
G +V + C P P+ W+ DG + + R ++ + NG NL IS + +D G
Sbjct: 412 GPSVYLKCTASGNPTPEITWELDGKRLSNTERFQVGQYVTVNGDVVSNLNISSIHTNDGG 471
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
+Y C A++ G E RL V +G + + K I A L++ C + + +
Sbjct: 472 LYKCIASSKVGSAEHSARLNV-YGLPFIRHMDKK-AIVAGETLRVTCPVAGHPIESI--V 527
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTVG 166
W + R+ ++ + PN G L I N + D Y CV ++ G
Sbjct: 528 WERD-TRVLPINRKQKVFPN-----GTLIIENVERSTDQATYTCVARNAQG 572
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGS-GGRRKIFENGNLLISPVSRDD------SG 56
G I C P+P +W + DG +G G R++ NGNL+ P +D +
Sbjct: 18 GTGAVIECQARGNPQPDIIWIRADGTAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQ 77
Query: 57 IYSCTATNVHGMDESK 72
+Y C A N G S+
Sbjct: 78 VYICLAKNPVGSIHSR 93
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 25/166 (15%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSGI 57
G ++ + C +A P P + W K I G+ R+ + N G L+I +DSG
Sbjct: 231 GKSLPLLCPAQAFPVPSYRWYK--FIEGTSRRQPVPLNERVRQVSGTLIILEAQVEDSGK 288
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C N G ES ++ + P E P TI R C+ + ++ W
Sbjct: 289 YLCVVNNSVG-GESVETVLTVTAPLSAEIEPRSQTIDFGRPATFTCNIKGNPIKTIS--W 345
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+G +G+ + L I + D G Y+C +++
Sbjct: 346 LKDGKPLGHEETT-------------LRIESVKKDDKGMYQCFIRN 378
>gi|383852157|ref|XP_003701595.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
Dscam2-like [Megachile rotundata]
Length = 2180
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 250/616 (40%), Gaps = 52/616 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRK--IFENGNLLISPVSRDDS 55
G V+I C E P P WK+ D +G G + NG+L+I VSRD +
Sbjct: 910 GHGVSIACQAEGFPIPTVTWKQSIGDTPGDYRELGYSGTEGAGVAGNGSLVIPRVSRDHA 969
Query: 56 GIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
G Y C A+N G SK RL V GP + + ++ ++ LRC A + LD++
Sbjct: 970 GFYLCQASNGIGPGLSKLIRLTVHAGPQVSVKTRQE-SVRRGESVTLRCEAEGDAPLDLS 1028
Query: 115 YIWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTK 171
W R+ N + G + L I A+ D G+Y CV + G
Sbjct: 1029 --WRARDSRVDPKYDVRYTIDNQKVSGRMISELRIIQANHIDRGDYTCVATNAYGHARAT 1086
Query: 172 TTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKIIARTNWNSTW 225
++V+ PP P + + E S + W+ D A PIT+Y I+ W
Sbjct: 1087 INLLVQEPPNFPRNLHIAEQGSRSLLLAWSSPSSEQDPAHASSPITNY-IVQYKEAQDVW 1145
Query: 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
EH K V G ++ + L P ++Y F+V+A N LG PS T +
Sbjct: 1146 H---EHNTQKMV---AGDNTVALVSPLKPATSYHFRVLAENHLGTSAPSDIL-HAQTDGE 1198
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKEY 343
P P + + ++W+P R N + Y I + ND +
Sbjct: 1199 IPSGPPRHVIAEPLGPQQVKVTWQPPDRSLWNGELLGYTISYANLGGNDQSVNITRVGIT 1258
Query: 344 GN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF 402
GN G R+ YT+Y + V+A N+ G GP S+ VT+ + ED+P PQ V
Sbjct: 1259 GNGDGSYDYRLTGLRKYTQYSIVVKAFNNKGDGPGSDPVTVQTLEDVPSAPPQNVACAAL 1318
Query: 403 NSTAINVTWNPIELIRENIRGRLIGHRIKY------WKEDNPEETAVYYLSRTTRNWALI 456
I VTW P + + G + G+++ Y ++ ET + + T ++
Sbjct: 1319 TGQNIQVTWKPPP--SDKVHGVVQGYKLLYEAASAVLEQHEGRETKISHALST-----VL 1371
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
GL P T Y V+V+AY AGEG S T P P +K + V +
Sbjct: 1372 HGLSPYTNYTVQVLAYTRAGEGVTSSPVSCTTEETVPDAPE---RVKAVTSNEDAVVISW 1428
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMS-RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575
+ P + Y V + +DQ + + +P +L + L + Y V A +
Sbjct: 1429 LPPRRPNGILTKYTVYIRVLDQGQEVKITKSSLP-AQSLHHEATGLKLRESYEAWVTAST 1487
Query: 576 NGGDGRMSSPAITFQM 591
G G S+P I Q+
Sbjct: 1488 KVGQGS-STPVIKLQL 1502
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + C+ P+ W KDG + +G R + + + V+R+D G+Y C N
Sbjct: 368 GKAAHLTCSASGFPQAALYWLKDGQPLRTGARIRAVSRERISVMSVAREDRGMYQCFVRN 427
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ M + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 428 EYEMAQGIAELRL-------GEIAPQLVYRFIEQTMQTGPSVSLKCSAAGNPTPQIS--W 478
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFA---DAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ N S D GEYEC+ S G+ S +
Sbjct: 479 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNISSVKSEDGGEYECIASSRAGEASHSARL 537
Query: 175 IVEGPP 180
+ G P
Sbjct: 538 NIYGLP 543
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 394 PQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPEETAVYYLSRTTR 451
P + + G + A+ + W + I+G L+ +R ++ W+E + A
Sbjct: 1598 PPTLLATGTTTDAVQLQWKQGDNGGAPIKGFLLAYRREFSEWEEVMLDRKA--------- 1648
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
N L+ GLQ T+Y + A+N G G S+ +T P PP+ + +N T
Sbjct: 1649 NTHLLEGLQCGTRYQFTLAAFNRIGSGSASKIETAKTNGTKP-VPPTKHQLIKVNQT--F 1705
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
VT S P++ + V + D ++ + P IVDL G +Y +RV
Sbjct: 1706 VTLELTSWQDGGCPLLYFVVEYRRLPGDWLLVSNNVPPQSR---FTIVDLEAGTKYELRV 1762
Query: 572 LAFSNGG 578
A++N G
Sbjct: 1763 TAYNNAG 1769
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 23/134 (17%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
A G I C P VW+KDG + + R+++ NG+L I V R D G Y+C
Sbjct: 553 AVAGKRFHIKCPVAGYPIESIVWEKDGVRLPTNMRQRV-ANGSLFIDTVQRAADQGTYTC 611
Query: 61 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKIT-IAAHRNL------QLRCSAHTEEL 110
TA N H + R++V PPKIT + R+L ++C T +
Sbjct: 612 TARNKHNFTSQRSVEVRVLV----------PPKITPFSFARDLNVGDRTSVQCVVVTGD- 660
Query: 111 LDVAYIWTHNGVRI 124
L + + W + V I
Sbjct: 661 LPLTFTWLKDNVPI 674
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
+ +G+L+I V +D+G Y CTA+N G + + RL V S + Q P T+ +
Sbjct: 312 MVRDGSLIIQGVQENDAGSYMCTASNSEGSESMEVRLTVSAPLSVHVQ-PSIQTVDLGKA 370
Query: 99 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156
L CSA A W +G +R G + + I+ + + + D G
Sbjct: 371 AHLTCSA--SGFPQAALYWLKDGQPLRTG-ARIRAVSRERIS-------VMSVAREDRGM 420
Query: 157 YECVVKS 163
Y+C V++
Sbjct: 421 YQCFVRN 427
>gi|38614294|gb|AAH60237.1| Sdk1 protein, partial [Mus musculus]
Length = 2159
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 252/598 (42%), Gaps = 41/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 441 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 500
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N + L V + S ++ I L C A + + Y+W
Sbjct: 501 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 559
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 560 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 615
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S T+ W P+ +Y + N NS W V +G E+
Sbjct: 616 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 673
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 674 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 726
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 727 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 783
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST ++ WNP
Sbjct: 784 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPP- 842
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 843 -QQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTT 901
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P I+GY++
Sbjct: 902 PGDGPPSSPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLERNGIIMGYQIS 956
Query: 533 VWEV-DQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ +T+ + I LS Y + V A + G G +S I+
Sbjct: 957 -WEVYGRNDSRLTHTL---NSTMHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSSTIS 1010
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 236/605 (39%), Gaps = 69/605 (11%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C P P W KD + R K+ +G L I +S +DSGI+ C A+N G
Sbjct: 354 IPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGG 413
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGV 122
++ L V + + Q P T+ LRC + +I V
Sbjct: 414 EVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSV 473
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
RI L ++ G L I DAG Y C +T ++ + V +
Sbjct: 474 RIPRFML---------LESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSI 524
Query: 183 --PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +VV + T+AT+ GAT+ RT+ W + + R
Sbjct: 525 VHPPEDRVV-IKGTTATL--CCGATHD---------PRTSLRYVWKKDNVVITASSSSRI 572
Query: 241 TGRKEASIENVLVPWS----TYEFKVIAGNELGYGEPSS-------PSPQYNTPADKPYQ 289
K+ S+ + WS Y ++I+ E G ++ P P N A
Sbjct: 573 VVEKDGSLV-ISQTWSGDIGDYTCEIIS--EGGSDSRTARLEVIELPHPPQNLLAS---L 626
Query: 290 APSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG- 347
+P+R +++SW P N+P +YY I +N++ ++ NVG
Sbjct: 627 SPARSH-------SVTLSWVRPF---DGNSPVLYY-IVQVSENNSPWKVH----LSNVGP 671
Query: 348 -IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ V + Y+ +V A+N VG G S E + E+ P P+ + + G +
Sbjct: 672 EMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQ 731
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I V W P N G L G+ ++Y P E +S N+ L+ L T+Y
Sbjct: 732 SIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQY 789
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 790 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGI 849
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSS 584
GYK+ W D + TI P + + I +L Y VL F+ GDG SS
Sbjct: 850 NQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSS 909
Query: 585 PAITF 589
P + +
Sbjct: 910 PQLVW 914
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1433 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1490
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1491 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1540
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG--- 344
+ I W+P E N Y+I++R+ K+ + ++E +
Sbjct: 1541 SSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKT 1600
Query: 345 ---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1601 VNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTP 1660
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G+++ YW+ D+ ET + I L
Sbjct: 1661 LTASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDLTS 1718
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY + + A+N AG+GP+S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1719 HTKYLISISAFNAAGDGPKSDPCQGRTHQAAP-GPPSFLAFSEITSTTLNVSWG--EPSA 1775
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1776 ANGILQGYRV 1785
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + I Y+I +W N S H +
Sbjct: 917 EDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQI----SWEVYGRNDSRLTHTLN 972
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ Y + +S+ +TY V A G G +S + P D P APS +
Sbjct: 973 STMHEYKIQGLSSL-------TTYTIDVAALTAAGVGVTTSSTISSGVPPDLP-GAPSNL 1024
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + D E +E ++ IP
Sbjct: 1025 VISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1084
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1085 NLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVP 1144
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P +S I L+ T+Y +++ A+N
Sbjct: 1145 LPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVSDRLERELTIEELEEWTEYELRMQAFN 1204
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 1205 AIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLY 1264
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1265 CAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1317
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 184/431 (42%), Gaps = 42/431 (9%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1003 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1058
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1059 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1111
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1112 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1171
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
++ + + + I +TEYE+++QA N +G GP SE+V + E +P AP
Sbjct: 1172 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAP 1228
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ V + +ST I +TW + +N G ++G+++ Y +D E + + A
Sbjct: 1229 ENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYCAKDLDPEPRSHVVRGNHTQSA 1286
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L+ GL+ Y ++V+A+ G G P S LERT P PP + + T V +
Sbjct: 1287 LLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPEVRLTAVRIV 1345
Query: 514 WRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHM 569
W+ EEP I+GY++ S T + VG T+ +L+P Y
Sbjct: 1346 WQP-----PEEPNGVILGYQIAYRLASG--SPHTFTTVEVGATVRQFTATELAPESAYIF 1398
Query: 570 RVLAFSNGGDG 580
R+ A + G G
Sbjct: 1399 RLSAKTRQGWG 1409
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 184/463 (39%), Gaps = 53/463 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1326 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1383
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1384 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1435
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1436 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1493
Query: 358 YYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1494 -FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPP 1550
Query: 415 ELIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + ++ E TA + +L
Sbjct: 1551 R--DESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLT 1608
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1609 TYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1668
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYKV WE D ++ + + I DL+ +Y + +
Sbjct: 1669 TWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLISIS 1727
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
AF+ GDG S P G + G P+ + STTL
Sbjct: 1728 AFNAAGDGPKSDPC----QGRTHQAAPGPPSFLAFSEITSTTL 1766
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G P T Y I AR + W + K+
Sbjct: 1848 EGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAKD 1901
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1902 IPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1952
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 14/328 (4%)
Query: 260 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 319
++ A N +G G P S + T P AP + + ++W +P + QN
Sbjct: 1198 LRMQAFNAIGAG-PWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGL 1256
Query: 320 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PE 377
+ YK+ + K+ D E +S ++ GN + + + + YE++V A +G G P
Sbjct: 1257 ILGYKVLYCAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVVYELQVLAFTRIGNGVPS 1313
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKED 436
S ++ + +D P + VF TA+ + W P E G ++G++I Y
Sbjct: 1314 SPLILERTKDDTPGPPVRLVFPE-VRLTAVRIVWQP----PEEPNGVILGYQIAYRLASG 1368
Query: 437 NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496
+P + T R + L P++ Y ++ A G G E + T ++ P
Sbjct: 1369 SPHTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAP 1427
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA 556
P + + T + ++V S PI + V+V E+ + + I T A
Sbjct: 1428 PRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACA 1487
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ L P Y +R+ A ++ GD S+
Sbjct: 1488 -VERLRPFTSYKLRLKATNDIGDSDFSA 1514
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 165 SCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPF 224
Query: 76 I---VLHGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I V +E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 225 IHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL 284
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L ITN + AD G Y C
Sbjct: 285 ---------TSGLHSYGRRLTITNPTSADTGMYVC 310
>gi|164518930|ref|NP_808547.3| protein sidekick-1 [Mus musculus]
gi|90183173|sp|Q3UH53.1|SDK1_MOUSE RecName: Full=Protein sidekick-1; Flags: Precursor
gi|74188487|dbj|BAE28004.1| unnamed protein product [Mus musculus]
Length = 2193
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 252/598 (42%), Gaps = 41/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 475 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 534
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N + L V + S ++ I L C A + + Y+W
Sbjct: 535 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 593
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 594 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 649
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S T+ W P+ +Y + N NS W V +G E+
Sbjct: 650 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 707
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 708 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 760
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 761 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 817
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST ++ WNP
Sbjct: 818 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPP- 876
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 877 -QQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTT 935
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P I+GY++
Sbjct: 936 PGDGPPSSPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLERNGIIMGYQIS 990
Query: 533 VWEV-DQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ +T+ + I LS Y + V A + G G +S I+
Sbjct: 991 -WEVYGRNDSRLTHTL---NSTMHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSSTIS 1044
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 236/605 (39%), Gaps = 69/605 (11%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C P P W KD + R K+ +G L I +S +DSGI+ C A+N G
Sbjct: 388 IPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGG 447
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGV 122
++ L V + + Q P T+ LRC + +I V
Sbjct: 448 EVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSV 507
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
RI L ++ G L I DAG Y C +T ++ + V +
Sbjct: 508 RIPRFML---------LESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSI 558
Query: 183 --PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +VV + T+AT+ GAT+ RT+ W + + R
Sbjct: 559 VHPPEDRVV-IKGTTATL--CCGATHD---------PRTSLRYVWKKDNVVITASSSSRI 606
Query: 241 TGRKEASIENVLVPWS----TYEFKVIAGNELGYGEPSS-------PSPQYNTPADKPYQ 289
K+ S+ + WS Y ++I+ E G ++ P P N A
Sbjct: 607 VVEKDGSLV-ISQTWSGDIGDYTCEIIS--EGGSDSRTARLEVIELPHPPQNLLAS---L 660
Query: 290 APSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG- 347
+P+R +++SW P N+P +YY I +N++ ++ NVG
Sbjct: 661 SPARSH-------SVTLSWVRPF---DGNSPVLYY-IVQVSENNSPWKVH----LSNVGP 705
Query: 348 -IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ V + Y+ +V A+N VG G S E + E+ P P+ + + G +
Sbjct: 706 EMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQ 765
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I V W P N G L G+ ++Y P E +S N+ L+ L T+Y
Sbjct: 766 SIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQY 823
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 824 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGI 883
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSS 584
GYK+ W D + TI P + + I +L Y VL F+ GDG SS
Sbjct: 884 NQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSS 943
Query: 585 PAITF 589
P + +
Sbjct: 944 PQLVW 948
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1467 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1524
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1525 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1574
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG--- 344
+ I W+P E N Y+I++R+ K+ + ++E +
Sbjct: 1575 SSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKT 1634
Query: 345 ---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1635 VNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTP 1694
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G+++ YW+ D+ ET + I L
Sbjct: 1695 LTASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDLTS 1752
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY + + A+N AG+GP+S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1753 HTKYLISISAFNAAGDGPKSDPCQGRTHQAAP-GPPSFLAFSEITSTTLNVSWG--EPSA 1809
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1810 ANGILQGYRV 1819
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + I Y+I +W N S H +
Sbjct: 951 EDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQI----SWEVYGRNDSRLTHTLN 1006
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ Y + +S+ +TY V A G G +S + P D P APS +
Sbjct: 1007 STMHEYKIQGLSSL-------TTYTIDVAALTAAGVGVTTSSTISSGVPPDLP-GAPSNL 1058
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + D E +E ++ IP
Sbjct: 1059 VISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1118
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1119 NLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVP 1178
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P +S I L+ T+Y +++ A+N
Sbjct: 1179 LPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVSDRLERELTIEELEEWTEYELRMQAFN 1238
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 1239 AIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLY 1298
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1299 CAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1351
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 184/431 (42%), Gaps = 42/431 (9%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1037 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1092
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1093 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1145
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1146 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1205
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
++ + + + I +TEYE+++QA N +G GP SE+V + E +P AP
Sbjct: 1206 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAP 1262
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ V + +ST I +TW + +N G ++G+++ Y +D E + + A
Sbjct: 1263 ENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYCAKDLDPEPRSHVVRGNHTQSA 1320
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L+ GL+ Y ++V+A+ G G P S LERT P PP + + T V +
Sbjct: 1321 LLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPEVRLTAVRIV 1379
Query: 514 WRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHM 569
W+ EEP I+GY++ S T + VG T+ +L+P Y
Sbjct: 1380 WQP-----PEEPNGVILGYQIAYRLASG--SPHTFTTVEVGATVRQFTATELAPESAYIF 1432
Query: 570 RVLAFSNGGDG 580
R+ A + G G
Sbjct: 1433 RLSAKTRQGWG 1443
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 187/469 (39%), Gaps = 53/469 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1360 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1417
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1418 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1469
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1470 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1527
Query: 358 YYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1528 -FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPP 1584
Query: 415 ELIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + ++ E TA + +L
Sbjct: 1585 R--DESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLT 1642
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1643 TYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1702
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYKV WE D ++ + + I DL+ +Y + +
Sbjct: 1703 TWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLISIS 1761
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
AF+ GDG S P G + G P+ + S + S+TL +
Sbjct: 1762 AFNAAGDGPKSDPC----QGRTHQAAPGPPSFLAFSE----ITSTTLNV 1802
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1881 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1934
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1935 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1986
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 189/458 (41%), Gaps = 33/458 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P + V +T
Sbjct: 1111 DAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASET 1170
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVS-EHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y++ W S + + V+ ++R E +IE
Sbjct: 1171 SLRLRWVPLPDSQYNGNPESVGYRV---KYWRSDQPSSALAQVVSDRLER-----ELTIE 1222
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1223 ELEEW-TEYELRMQAFNAIGAG-PWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1280
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YK+ + K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1281 SVPEQDQNGLILGYKVLYCAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVVYELQVLA 1337
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S ++ + +D P + VF TA+ + W P E G ++G
Sbjct: 1338 FTRIGNGVPSSPLILERTKDDTPGPPVRLVFPE-VRLTAVRIVWQP----PEEPNGVILG 1392
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1393 YQIAYRLASGSPHTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVI 1451
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + V+V E+ + +
Sbjct: 1452 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSS 1511
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
I T A + L P Y +R+ A ++ GD S+
Sbjct: 1512 SISHEATACA-VERLRPFTSYKLRLKATNDIGDSDFSA 1548
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 199 SCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPF 258
Query: 76 I---VLHGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I V +E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 259 IHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL 318
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L ITN + AD G Y C
Sbjct: 319 ---------TSGLHSYGRRLTITNPTSADTGMYVC 344
>gi|332021243|gb|EGI61628.1| Down syndrome cell adhesion molecule-like protein [Acromyrmex
echinatior]
Length = 2308
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 155/610 (25%), Positives = 265/610 (43%), Gaps = 64/610 (10%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKD-GNIIGSGGRRKI------FENGNLLISPVSRDDS 55
+G + + C + PKP+ WK+ G+ G K+ E+G L I+ + + +
Sbjct: 1014 AQGSDARVECKADGFPKPQVTWKRAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNE 1073
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C A N G S LI + P +E T L+C A E+ + +
Sbjct: 1074 GYYLCEAVNGIGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCEAQGEKPIGI-- 1131
Query: 116 IWTHNGVRIGNM-DLNELETPNINIDGGL--LEITNASFADAGEYECVVKSTVGKISTKT 172
+W N R+ D I +G L L I +D+ + CV + G T
Sbjct: 1132 LWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSI 1191
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVS 229
+IV+ P +P G++V++ S + W PI Y I I++ +W +
Sbjct: 1192 NMIVQEVPEIPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISKGSWET------ 1245
Query: 230 EHVIGKEVDRY----TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD 285
++DR + + A + N L P +TY +++A NE+G +PS + T +
Sbjct: 1246 ------DIDRVLVPGSQQNVAGVYN-LRPATTYHLRIVAENEIGTSDPSD-TVTIITAEE 1297
Query: 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-------TEFQSE 338
P P+ I L ++W+P PRE N + Y + +R+ +D +F E
Sbjct: 1298 APTGPPTSIKVDALDQHTLKVTWKPPPREDWNGEILGYYVGYRQSSDKPYMFETVDFSKE 1357
Query: 339 TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398
+KE+ ++ IA ++ YT+Y V VQA N VG GP SE +AE +P+ P
Sbjct: 1358 DIKEH-HLQIANLKT-----YTQYGVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTT 1411
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-----WKEDNPEETAVYYLSRTTRNW 453
S I V+W L N G + G+++ Y W ++N ++T + S T
Sbjct: 1412 CTTLTSQTIRVSWVSPPLSAAN--GVITGYKVIYGPSDTWYDENTKDTKITSSSET---- 1465
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
++ GL+ T Y ++V+A+ + G+G +S +T + AP+ P A+ ++ ++ ++
Sbjct: 1466 -ILHGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEA-PIAIKALVMSSESILIS 1523
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
WR P + +I + D + + P N L + L +RY V A
Sbjct: 1524 WR---PPSQPNGVISQYTVYTKADNTEEPTSQKVPP--NQLTHEASGLDKQQRYEFWVTA 1578
Query: 574 FSNGGDGRMS 583
+N G+G S
Sbjct: 1579 STNIGEGEAS 1588
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 149/595 (25%), Positives = 240/595 (40%), Gaps = 64/595 (10%)
Query: 45 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 104
L I V+ +G YSC A+N+ G S+ ++ ++ P + P A + ++ C
Sbjct: 966 LTIESVTARHAGEYSCVASNLVG-SVSRSAVLSVNVPPRWILEPTDKAFAQGSDARVECK 1024
Query: 105 AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKST 164
A V + DL +L P+I+++ G L I N + G Y C +
Sbjct: 1025 ADGFPKPQVTWKRAAGDTPGDYTDL-KLSNPDISVEDGTLSINNIQKTNEGYYLCEAVNG 1083
Query: 165 VGK-ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 223
+G +S + V+ PP ++ + + + A +PI
Sbjct: 1084 IGSGLSAVILISVQAPPQFEIKLRNQTARRGEPAVLQCE-AQGEKPI-----------GI 1131
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE--------FKVIAGNELGYGEPSS 275
W ++ + K RYT R+E VL S F +A N G + S
Sbjct: 1132 LWNMNNKRLDTKSDPRYTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSI 1191
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWR-K 329
P + PY G K+ D S +SW P + N+P Y I ++
Sbjct: 1192 NMIVQEVP-EIPY---------GLKVLDKSGRSVQLSWA-APYDG-NSPIKRYVIEYKIS 1239
Query: 330 KNDTEFQSETLKEYGN----VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS 385
K E + + G+ G+ +R P+ T Y +++ A N++G S+ VTI +
Sbjct: 1240 KGSWETDIDRVLVPGSQQNVAGVYNLR-PA----TTYHLRIVAENEIGTSDPSDTVTIIT 1294
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE-DNPE--ETA 442
AE+ P P + + + VTW P RE+ G ++G+ + Y + D P ET
Sbjct: 1295 AEEAPTGPPTSIKVDALDQHTLKVTWKPPP--REDWNGEILGYYVGYRQSSDKPYMFETV 1352
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + I L+ T+Y V V A+N G GP SE + T P++PP
Sbjct: 1353 DFSKEDIKEHHLQIANLKTYTQYGVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTTC 1412
Query: 503 KGINPTTVHVTWRYVSP--SFEEEPIIGYKVRVWEVDQ--DMSRANDTIIPVGNTLDADI 558
+ T+ V+W VSP S I GYKV D D + + I T+ +
Sbjct: 1413 TTLTSQTIRVSW--VSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETI---L 1467
Query: 559 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLL 613
L Y M+VLAF++GGDG S+P + E AL +S ++L+
Sbjct: 1468 HGLKKYTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILI 1522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTAT 63
G + + C P VW++D ++ ++K+F NG L+I V R D Y+C A
Sbjct: 425 GETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFLNGTLIIENVERMSDQATYTCVAR 484
Query: 64 NVHGMDESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHN 120
N G ++G L V+ P E K+ + A L+C + +L L++ W++
Sbjct: 485 NAQGY-SARGTLEVQVMVPPIVQEFAFTKLPMNAGEFANLQCIVSSGDLPLNIR--WSYP 541
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G +G + + + +L I+ + GEY C ++ G S T + V P
Sbjct: 542 GEEMGGS--SGVLAKKVADRVSMLMISVITARHTGEYVCTAENAAGTASHSTVLTVNVAP 599
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+V + C P P+ WK G + + R K G+L I V R D+G YSC N
Sbjct: 1617 DVKLPCLTVGVPAPEVTWKVRGANLQTTERLKQLPEGSLFIKEVDRADAGEYSCYVENSF 1676
Query: 67 GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLR 102
G D +L+V H P + Q+ T ++LR
Sbjct: 1677 GHDTVTHQLVV-HAPPHSPQVTLTATTTNSLTMKLR 1711
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 8/141 (5%)
Query: 45 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS 104
L I V+ +G Y+CTA+NV G S L V P + P N S
Sbjct: 660 LTIDAVTARHAGEYTCTASNVAGGTSSSASLAVNVAP----HIGPFAISDGPANWGDMVS 715
Query: 105 AHTEEL---LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
A + V +WT NG I D +++ NIN L I + + AGEY CV
Sbjct: 716 ATCSIMKGDFPVKIVWTFNGKPISLHD-SDITITNINKHMSALSIESVAARHAGEYTCVA 774
Query: 162 KSTVGKISTKTTVIVEGPPGL 182
+ G +S T ++V P +
Sbjct: 775 TNRAGNVSHSTILVVNVAPQI 795
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G T C + P W KDG +G E+ L I V ++D G+Y C N
Sbjct: 242 GRPATFTCTVQGNPIKTISWLKDGKPLG-------LEDRVLRIESVKKEDKGMYQCFVRN 294
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIA-AHRNLQ------LRCSAHTEELLDVAYIW 117
ES L +E PP+I A A LQ L+C A ++ W
Sbjct: 295 DQ---ESAQATAELKLGGRFE--PPQIRQAFAEETLQPGPSMFLKCVASGNPTPEIT--W 347
Query: 118 THNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTV 174
+G R+ N + ++ + ++G + L I++ D G Y+C+ S VG +
Sbjct: 348 ELDGKRLSNTERLQVGQ-YVTVNGDVVSHLNISSIHTNDGGLYKCIAASKVGAAEHSARL 406
Query: 175 IVEGPP 180
V G P
Sbjct: 407 NVYGLP 412
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 45 LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQ------LPPKI---TIAA 95
+ I VS +G Y+CTA+N G L V +G Y ++ L P+I +I+
Sbjct: 855 MTIEAVSPRHAGEYTCTASNAAGATSYSATLAV-NGTGYLDETVLLSSLAPQIAPFSISE 913
Query: 96 H-RNLQLRCSAHTEEL---LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 151
N + SA L L + W+ NG I ++ ++ N +L I + +
Sbjct: 914 EPANWGEQVSAMCSILKGDLPIEIRWSLNGEIITRLNHPDVIITNTGKKTSVLTIESVTA 973
Query: 152 ADAGEYECVVKSTVGKISTKTTVIVEGPP 180
AGEY CV + VG +S + V PP
Sbjct: 974 RHAGEYSCVASNLVGSVSRSAVLSVNVPP 1002
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 19/171 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE----NGNLL----ISPVSRDDSG 56
G ++ + C P P+ W+ DG + + R ++ + NG+++ IS + +D G
Sbjct: 328 GPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISSIHTNDGG 387
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
+Y C A + G E RL V +G + + K I A L++ C + + +
Sbjct: 388 LYKCIAASKVGAAEHSARLNV-YGLPFIRHMDKK-AIVAGETLRVTCPVAGYPIESI--V 443
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNAS-FADAGEYECVVKSTVG 166
W + R+ + +N + +N G L I N +D Y CV ++ G
Sbjct: 444 WERD-TRV--LPINRKQKVFLN---GTLIIENVERMSDQATYTCVARNAQG 488
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 25/167 (14%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-------GNLLISPVSRDDSG 56
EG ++ + C + P P W K I G+ R+ + N G L+I +DSG
Sbjct: 146 EGESLALACAAQGFPAPITRWYK--FIEGTSRRQPVQLNERVRQVSGTLIIREARVEDSG 203
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
Y C N G ES ++ + P E P TI R C+ + ++
Sbjct: 204 KYLCIVNNSVG-GESVETVLTVTAPLIAEIEPSTQTIDFGRPATFTCTVQGNPIKTIS-- 260
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
W +G +G ++ +L I + D G Y+C V++
Sbjct: 261 WLKDGKPLG-------------LEDRVLRIESVKKEDKGMYQCFVRN 294
>gi|392332542|ref|XP_003752615.1| PREDICTED: protein sidekick-1-like [Rattus norvegicus]
Length = 2114
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 248/597 (41%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WKK +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 396 DGMTAVLRCEVSGAPKPAITWKKGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYA 455
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN + L V + S ++ I L C A + + Y+W
Sbjct: 456 CYATNTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 514
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 515 DNAVITPSSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIEL 570
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S T+ W P+ +Y + N NS W V +G E+
Sbjct: 571 PHPPQNLLASLSSARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 628
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 629 AGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 681
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 682 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 738
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST ++ WNP
Sbjct: 739 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPP- 797
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE ++ + I L+ T Y+ V+ +
Sbjct: 798 -QQFINGINQGYKLLAWPADAPETVTAVTIAPDFHGTHHGYITNLKKFTAYFTSVLCFTT 856
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ +P + H+ I T++ V+W+ P I GY++
Sbjct: 857 PGDGPPSTPQLVWTHE---DRPGAVGHLSFTEILDTSLKVSWQ--EPLERNGIITGYQIS 911
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G +S I+
Sbjct: 912 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAMTTAGVGLTTSSTIS 965
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 229/605 (37%), Gaps = 65/605 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C P P W KD + R ++ +G L I +S +DSGI+ C A N
Sbjct: 307 VDIPCRAMGVPLPTLQWYKDAVPLSKLQNPRYRVLPSGGLHIQKLSPEDSGIFQCFANNE 366
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHN 120
G ++ L V + + Q P T+ LRC + +I
Sbjct: 367 GGEIQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKKGNHILASG 426
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
VRI L ++ G L I DAG Y C +T ++ + V
Sbjct: 427 SVRIPRFML---------LESGGLRIAPVFIQDAGNYACYATNTEASVNASAMLTVWNRT 477
Query: 181 GL--PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
+ P +VV + T+AT+ GAT+ RT+ W + +
Sbjct: 478 SIVHPPEDRVV-IKGTTATL--CCGATHD---------PRTSLRYVWKKDNAVITPSSSS 525
Query: 239 RYTGRKEASIENVLVPWS------TYEFKVIAGNELGYGEPSS---PSPQYNTPADKPYQ 289
R K+ S+ + WS T E GN+ P P N A
Sbjct: 526 RIVVEKDGSLV-ISQTWSGDIGDYTCEIVSEGGNDSRTARLEVIELPHPPQNLLASL--- 581
Query: 290 APSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG- 347
+ +++SW P N+P +YY I +N++ ++ NVG
Sbjct: 582 -------SSARSHSVTLSWVRPF---DGNSPVLYY-IVQVSENNSPWKVH----LSNVGP 626
Query: 348 -IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
+A V + Y+ +V A+N VG G S E + E+ P P+ + + G +
Sbjct: 627 EMAGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQ 686
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I V W P N G L G+ ++Y P E +S N+ L+ L T+Y
Sbjct: 687 SIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQY 744
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 745 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGI 804
Query: 526 IIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
GYK+ W D + TI P T I +L Y VL F+ GDG S+
Sbjct: 805 NQGYKLLAWPADAPETVTAVTIAPDFHGTHHGYITNLKKFTAYFTSVLCFTTPGDGPPST 864
Query: 585 PAITF 589
P + +
Sbjct: 865 PQLVW 869
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 160/368 (43%), Gaps = 37/368 (10%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKE 245
V EV S +QW G+ PI ++ + R W S + E
Sbjct: 1388 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSI----------SHE 1437
Query: 246 ASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
A++ V L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1438 ATLCAVERLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTTSS 1497
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRK-KNDTEFQSE--TLK-------------EYGNVG 347
+ I W+P E N Y+I++R+ +++T E TLK + V
Sbjct: 1498 VLIQWQPPRDESLNGLLQGYRIYYRELESETGLSPEPKTLKSPSALRAELTAQSSFKTVN 1557
Query: 348 IAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN 403
+ E Y YEV + A N +G P S V +F E P +APQ +
Sbjct: 1558 SSSTLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNIQVTPLT 1617
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
++ + VTW+P +N G + G+++ YW+ D+ ET + I L T
Sbjct: 1618 ASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDLTSHT 1675
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
KY V + A+N AG+GP S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1676 KYLVSISAFNAAGDGPRSDPCQGRTHQAAP-GPPSFLEFSEITSTTLNVSWG--EPSAAN 1732
Query: 524 EPIIGYKV 531
+ GY+V
Sbjct: 1733 GILQGYRV 1740
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 872 EDRPGAVGHLSFTEILDTSLKVSWQEPLERNGIITGYQI----SWEVYGRNDSRLTHTLN 927
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A G G +S + P D P APS +
Sbjct: 928 STTHEYKIQGLSSL-------TTYTIDVAAMTTAGVGLTTSSTISSGVPPDLP-GAPSNL 979
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + D E +E ++ IP
Sbjct: 980 VISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1039
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1040 NLTPYTHYRFRMKQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVP 1099
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P ++ I L+ T+Y +++ A+N
Sbjct: 1100 LPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVNDRLERELTIEELEEWTEYELRMQAFN 1159
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 1160 AIGAGPWSELVRGRTRESVPSASPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLY 1219
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1220 RAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1272
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 184/431 (42%), Gaps = 42/431 (9%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 958 LTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1013
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1014 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPFSQSS 1066
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1067 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1126
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
++ + + + I +TEYE+++QA N +G GP SE+V + E +P +P
Sbjct: 1127 ALAQVVNDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSASP 1183
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ V + +ST I +TW + +N G ++G+++ Y +D E + + A
Sbjct: 1184 ENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYRAKDLDPEPRSHVVRGNHTQSA 1241
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L+ GL+ Y ++V+A+ G G P S LERT P PP + + T V +
Sbjct: 1242 LLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPEVRLTAVRIV 1300
Query: 514 WRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHM 569
W+ EEP I+GY++ S T + VG T+ +L+P Y
Sbjct: 1301 WQP-----PEEPNGVILGYQIAYRLASG--SPHTFTTVEVGATVRQFTATELAPESAYIF 1353
Query: 570 RVLAFSNGGDG 580
R+ A + G G
Sbjct: 1354 RLSAKTRQGWG 1364
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 180/462 (38%), Gaps = 51/462 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1281 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1338
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1339 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1390
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
++ S+ + +P +P Y+ + R+ E+Q+ + + V F
Sbjct: 1391 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATLCAVERLRPF- 1449
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1450 -TSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPPR 1506
Query: 416 LIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYL----SRTTRNW 453
E++ G L G+RI Y + ++ E TA S +T
Sbjct: 1507 --DESLNGLLQGYRIYYRELESETGLSPEPKTLKSPSALRAELTAQSSFKTVNSSSTLTT 1564
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L+ +Y V + AYN GE P S AP P + + + + + VT
Sbjct: 1565 YELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNIQVTPLTASQLEVT 1624
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W P + I GYKV WE D ++ + + I DL+ +Y + + A
Sbjct: 1625 WDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLVSISA 1683
Query: 574 FSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS----ASTTL 611
F+ GDG S P G + G P+ STTL
Sbjct: 1684 FNAAGDGPRSDPC----QGRTHQAAPGPPSFLEFSEITSTTL 1721
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 14/328 (4%)
Query: 260 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP 319
++ A N +G G P S + T P +P + + ++W +P + QN
Sbjct: 1153 LRMQAFNAIGAG-PWSELVRGRTRESVPSASPENVSAEAVSSTQILLTWASVPEQDQNGL 1211
Query: 320 NIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG-PE 377
+ YK+ +R K+ D E +S ++ GN + + + + YE++V A +G G P
Sbjct: 1212 ILGYKVLYRAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVVYELQVLAFTRIGNGVPS 1268
Query: 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-WKED 436
S ++ + +D P + VF TA+ + W P E G ++G++I Y
Sbjct: 1269 SPLILERTKDDTPGPPVRLVFPE-VRLTAVRIVWQP----PEEPNGVILGYQIAYRLASG 1323
Query: 437 NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496
+P + T R + L P++ Y ++ A G G E + T ++ P
Sbjct: 1324 SPHTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAP 1382
Query: 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDA 556
P + + T + ++V S PI + V+V E+ + + I TL A
Sbjct: 1383 PRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATLCA 1442
Query: 557 DIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ L P Y +R+ A ++ GD S+
Sbjct: 1443 -VERLRPFTSYKLRLKATNDIGDSDFSA 1469
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P V V + + T+QWT+G T P T Y I AR + W + K+
Sbjct: 1803 EGSPGSPRNVLVTK-SASELTLQWTEGNTGNTPTTGYVIEARPSDEGLW-----DMFAKD 1856
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1857 IPRSATSYTVGLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1907
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 120 SCPRPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNERNGENKTSPF 179
Query: 76 I---VLHGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I V E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 180 IHLSVARDTGTQEAMAPVIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL 239
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I N + AD G Y C
Sbjct: 240 ---------TSGLHSYGRRLTIINPTSADTGMYVC 265
>gi|296203082|ref|XP_002806914.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Callithrix
jacchus]
Length = 2108
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 167/643 (25%), Positives = 270/643 (41%), Gaps = 63/643 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 435 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 494
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + Y+W
Sbjct: 495 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYVWEK 553
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G M+ N P I +D G L I+ D G Y C V S G S + V
Sbjct: 554 DGATLG-MESN----PRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 608
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + W P+ Y + N N+ W V+
Sbjct: 609 LPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLAS 662
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 663 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 719
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P QN Y I + +F++ T + N+ + + I
Sbjct: 720 SGRTNQSIMIQWQPPAESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 779
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 780 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 834
Query: 414 -----IELIRENIR--GR-------LIGHRIKYWKEDNPEETAV-YYLSRTTRNWALIVG 458
I I + + GR L G+RI W+E N T V +YL T + + G
Sbjct: 835 PSPQFINGINQGYKSAGRAGREKWHLTGYRIS-WEEYNRTNTRVTHYLPNVTLEYR-VTG 892
Query: 459 LQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
L T Y ++V A + G+G S + PP+ + I I P +V + +R
Sbjct: 893 LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISNIGPRSVTLQFR--- 949
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRAND-----TIIPVGNTLDA---DIVDLSPGKRYHMR 570
P ++ + I W V+ + + I + N DA ++ DL+P Y R
Sbjct: 950 PGYDGKTSISR----WLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTYYSFR 1005
Query: 571 VLAFSNGGDGRMSSPAITFQ-MGEEKEFKSGSPALYSASTTLL 612
+ + G S P+ Q + + + +L +AS T L
Sbjct: 1006 MRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLPTASETSL 1048
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 187/440 (42%), Gaps = 51/440 (11%)
Query: 117 WTHNGVRIGNMDLNELET------PNINID---GGLLEITNASFADAGEYECVVKSTVGK 167
W G RI + N T PN+ ++ GL +T + E ++ G+
Sbjct: 858 WHLTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTI------EVAAMTSKGQ 911
Query: 168 ISTKTTVIVEG-PPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-- 221
+ I G PP LPG + + + S T+Q+ G I+ + + A+
Sbjct: 912 GQVSASTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVG 971
Query: 222 -NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 280
W + H + E D + + + L P++ Y F++ N +G PS PS +
Sbjct: 972 EGEEWLLI--HQLSNEPDA----RSMEVPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKI 1024
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKIFWRKKNDTEFQSE 338
T P AP+ + L + W PLP + N ++ YKI K + ++ +
Sbjct: 1025 QTLQAPPDMAPANVSLPTASETSLWLRWMPLPEMEYNGNPESVGYKI---KYSRSDGHGK 1081
Query: 339 TLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV 392
TL + R+ E+ +TEY V+VQA N +G GP S+ V + E +P
Sbjct: 1082 TLSH-----VVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQTVMGRTRESVPSS 1136
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P V + S+++ V W+ + N G ++G+++ Y ++D+ + + + +
Sbjct: 1137 GPTNVSALATTSSSMLVRWSDVPEADRN--GLVLGYKVIYKEKDSDAQPRFWLVEGNSSR 1194
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
A + GL Y V+V+A+ G+G P LERT P PP + + T+V
Sbjct: 1195 SAQLTGLGKYVLYEVQVLAFTRIGDGRPSHPPILERTLDDVP-GPPMGILFPEVRTTSVR 1253
Query: 512 VTWRYVSPSFEEEPIIGYKV 531
+ W+ P+ I+ Y++
Sbjct: 1254 LIWQ--PPAAPNGIILAYQI 1271
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 176/425 (41%), Gaps = 52/425 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P Q +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1337 PPSRPVAQQE-DVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1395
Query: 235 KEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VDR G ++ + + + + S P Y + P +AP+
Sbjct: 1396 FIVDRXGPGPRQ------------HPHRPSPHQDQHVSQLLSEEPTYLPLSTAPDEAPTI 1443
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ + I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1444 LSVTPHTTTSVLIRWQPPAEDKINGVLLGFRIRYRELLYEGLRGFTLRGINNPGATWAEL 1503
Query: 354 PSEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
S + + YE+++ N VG GP S +F E +P AP
Sbjct: 1504 TSMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPHEVFVGEAVPTAAP 1563
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTR 451
+ V G +T ++VTW P L +N G + G++I +W +++ E +L+ +
Sbjct: 1564 RNVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRQNLTERVKTLFLAENSV 1621
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVH 511
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+
Sbjct: 1622 KLKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVQFSELTTTSVN 1677
Query: 512 VTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYH 568
V+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1678 VSWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYR 1734
Query: 569 MRVLA 573
R+ A
Sbjct: 1735 FRIRA 1739
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V + T++ +
Sbjct: 991 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLPTASETSLWL 1050
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1051 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1110
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1111 QAFNAIGSGPWSQTVMGRTRESVPSSGPTNVSALATTSSSMLVRWSDVPEADRNGLVLGY 1170
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDGR S P I
Sbjct: 1171 KVIYKEKDSD-AQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGRPSHPPI 1227
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 26/348 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1027 LQAPPDMAPANVSLPTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1084
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1085 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVMGRTRESVPSS 1136
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1137 GPTNVSALATTSSSMLVRWSDVPEADRNGLVLGYKVIYKEK-DSDAQPRFWLVEGNSSRS 1195
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1196 A-QLTGLGKYVLYEVQVLAFTRIGDGRPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1253
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + GL+P++ Y +
Sbjct: 1254 LIWQPPAAPNGIILAYQITHRLNTTTANT---AMVEVLAPSARQYT-ATGLKPESVYLFR 1309
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTW 514
+ A G G +E + T ++ +PPS + + +V ++W
Sbjct: 1310 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPVAQQEDVRARSVLLSW 1357
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 135/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1531 YEIRMSVYNAVGEG-PSSPPHEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1589
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1590 GDIQGYKIYFWEAQRQNLTE-RVKTLFLAEN----SVKLKNLTGYTAYMVSVAAFNAAGD 1644
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1645 GPRSTPTQGQTQQAAPS-APSSVQFSELTTTSVNVSWEAPQF----PNGILEGYRLVYEP 1699
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1700 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1757
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1758 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1815
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1816 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1851
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1768 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1824
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1825 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1858
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 106/282 (37%), Gaps = 38/282 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 146 GEAAVIRAPRIASFPRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 205
Query: 64 NVHGMDESKGRLIVLH------GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELL 111
N D + I L GP+ I +A + L C A+ L+
Sbjct: 206 NDKNGDNKTSQPITLAVERDVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLI 265
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKI 168
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 266 KLHIIWKKDGV---------LLSGGISDHNRRLTIPNPTASDAGYYECEAVLRSSSVPSV 316
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228
+ V PP V+ E H T+ + D + + I +W+
Sbjct: 317 VRGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------SWYKD 365
Query: 229 SEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
+ V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 366 AAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNSAG 407
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 346 VDIPCRAKGVPPPSISWYKDAAVVEVEKLARFRQRSDGGLQISGLVPDDTGMFQCFARNS 405
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 406 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 462
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 463 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 512
>gi|242008252|ref|XP_002424921.1| down syndrome cell adhesion molecule, putative [Pediculus humanus
corporis]
gi|212508527|gb|EEB12183.1| down syndrome cell adhesion molecule, putative [Pediculus humanus
corporis]
Length = 1528
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 241/558 (43%), Gaps = 51/558 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKD-GNIIGS------GGRRKIFENGNLLISPVSRDDSGI 57
G + + C P P WKK G +G I+ NG+L S + +++ G
Sbjct: 559 GQELILNCQGNGYPTPTTTWKKSTGEFLGEYKDFLYDSNISIYPNGSLKFSKIFKENQGH 618
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C N G SK + ++ P Y+ Q +I + + ++C A E +++ W
Sbjct: 619 YLCELKNEVGSGLSKLIYLKVNVPVYFPQKFKQIQVIQGKEAHMQCPAIGETPIEIE--W 676
Query: 118 THNGVRIG-NMDLNELETPNINIDGGLLEIT--NASFADAGEYECVVKSTVGKISTKTTV 174
G +I N + I DG + EI+ D G + C ++ G+ K +
Sbjct: 677 RIKGQKIQENKHSRYIINKQILTDGLVSEISIPKTYRHDTGIFTCYATNSFGRDEMKIQL 736
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
IV+ P +P +++ + S I WT IT+Y II N W S ++I
Sbjct: 737 IVQENPEIPKNIRINDKQSRSLQISWTQPYAGNSQITNY-IIEYKKSNENWEKNSNNIIV 795
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ +T K L P+++Y +VIA N LG EPS Q T + P P +
Sbjct: 796 TGSETFTTLKN------LKPFTSYHVRVIAENPLGKSEPSE-FIQVITQEEVPDGPPLNV 848
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK----NDTEFQSETLKEYGNVGIAV 350
G ++ +SW+ P+ N + Y + +++ T + + K N
Sbjct: 849 KGNAESSTEIKVSWDSPPKNTWNGNLLGYYVGYKENLLYHVTTSILNSSSKYINNYNFKT 908
Query: 351 VRIPSEF----------YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
V SEF YT Y + VQA N G GP SE + I + ED+P +P+ + +
Sbjct: 909 VDKISEFEEEIILEKLNKYTTYSIIVQAFNSKGSGPASEPILIRTKEDVPSSSPENIICK 968
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNW 453
+S +I ++W+P ++N G L+G++I Y E++ EE + L++T
Sbjct: 969 TLSSQSIEISWDPPNSNKQN--GILLGYKIFYKVVSNKRLLEEDEEEIKITKLTKT---- 1022
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+I GL + + ++A+ +AG+G +S++ +T P P IK + ++
Sbjct: 1023 -VISGLSKYSNHSFTLLAFTSAGDGIKSDKIFCKTDEDVPSSPKD---IKAALSSFDNIL 1078
Query: 514 WRYVSPSFEEEPIIGYKV 531
++ P ++ II Y +
Sbjct: 1079 VTWLPPLYKNGIIISYTI 1096
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 112/534 (20%), Positives = 205/534 (38%), Gaps = 63/534 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
A G N I C P W++ G + R+K++ NG L+I + ++ D G Y+C
Sbjct: 371 AIAGKNFIIKCPVAGYPIESISWEQGGVYLPINRRQKVYSNGTLIIENLQKEFDGGTYTC 430
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--LRCSAHTEEL---LDVAY 115
A N + R + +H +PPKI + L+ +R + + + L +
Sbjct: 431 QAKN--NQRATARRNVEIHI-----MVPPKILLTQDITLREGMRAAITCQIIEGDLPFKF 483
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
W NG+ I + +L+ ++ L+ I N S +AG Y C ++ G+ S ++
Sbjct: 484 RWEKNGLLIAD---EKLQIRRVDEYSSLIVIDNISTDNAGNYTCFAQNVAGEESLTVSLT 540
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
V+ PP ++ V+ + TS + NG P +TW + +G+
Sbjct: 541 VKVPPKW--KIEPVDTNVTSGQELILNCQGNGYPTP----------TTTWKKSTGEFLGE 588
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAG-------NELGYGEPSSPSPQYNTPADKP- 287
D + N + +S FK G NE+G G + N P P
Sbjct: 589 YKDFLYDSNISIYPNGSLKFSKI-FKENQGHYLCELKNEVGSGLSKLIYLKVNVPVYFPQ 647
Query: 288 -YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
++ I G + +I P+ +I WR K +++ + N
Sbjct: 648 KFKQIQVIQGKEAHMQCPAIGETPI------------EIEWRIKGQKIQENKHSRYIINK 695
Query: 347 GIAV------VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400
I + IP + + A N G E+ ++ P++ P+ +
Sbjct: 696 QILTDGLVSEISIPKTYRHDTGIFTCYATNSFG---RDEMKIQLIVQENPEI-PKNIRIN 751
Query: 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ 460
S ++ ++W I +I ++ +N E+ + + + + + L+
Sbjct: 752 DKQSRSLQISWTQPYAGNSQITNYIIEYK---KSNENWEKNSNNIIVTGSETFTTLKNLK 808
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
P T Y+V+V+A N G+ SE T + P PP V + T + V+W
Sbjct: 809 PFTSYHVRVIAENPLGKSEPSEFIQVITQEEVPDGPPLNVKGNAESSTEIKVSW 862
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 9/174 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN-LLISPVSRDDSGIYSCTATNVHGMDE 70
C P + W DG ++ R K EN + L I PV + D G+Y C +N M +
Sbjct: 192 CVIGGFPLSQISWFHDGKLLTKSKRHKFKENFDKLYIKPVEKQDRGMYQCFVSNEWEMVQ 251
Query: 71 SKGRLIVLH-GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI---GN 126
S + + P K T+ ++ L+CSA + W+ +G +
Sbjct: 252 SAAEIQLGDTSPELISWFSEK-TLQPGSSISLKCSATGSP--PPHFSWSLDGFPVPDSSR 308
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + T + N+ L IT D GEY+C K++V +IS + + G P
Sbjct: 309 FIVGQYITTSDNVITHL-NITRTEEEDGGEYKCTAKNSVSEISHAAKINIYGKP 361
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 8 VTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH 66
+ + C P P +WK K I + R ++ +G+L+I V + D G YSC+ NV+
Sbjct: 1182 LNLTCLNVGIPNPNLIWKFKSTQIKNTNSRIQVQNDGSLIIKDVQKMDEGNYSCSVENVY 1241
Query: 67 GMDESKGRLIV 77
G DE LI+
Sbjct: 1242 GKDEIIYNLII 1252
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 64/166 (38%), Gaps = 14/166 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNI----IGSGGRRKIFENGNLLISPVSRDDSG 56
Y+ G +V C + P P + W K+ + R G LLIS + DD G
Sbjct: 87 YSKIGEDVIFSCIAQGFPTPDYKWFKNEKEQFLPLIFNERINELAPGLLLISKIKLDDKG 146
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN-LQLRCSAHTEELLDVAY 115
Y C A N G D + L+V S + Q P+I I N C L ++
Sbjct: 147 KYVCMANNSAGKDSVQINLVVTAPLSVHIQ--PQIQIVDVNNEAVFECVIGGFPLSQIS- 203
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
W H+G + ++ + N D L I D G Y+C V
Sbjct: 204 -WFHDGKLLTKSKRHKFKE---NFDK--LYIKPVEKQDRGMYQCFV 243
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLL----ISPVSRDDSG 56
G ++++ C+ +P P F W DG + R + I + N++ I+ +D G
Sbjct: 277 GSSISLKCSATGSPPPHFSWSLDGFPVPDSSRFIVGQYITTSDNVITHLNITRTEEEDGG 336
Query: 57 IYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116
Y CTA N + S I ++G + + PKI A +N ++C + ++
Sbjct: 337 EYKCTAKNSVS-EISHAAKINIYGKPFIRSM-PKINAIAGKNFIIKCPVAGYPIESIS-- 392
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTVGKISTKTTVI 175
W GV + +N + N G L I N D G Y C K+ + + I
Sbjct: 393 WEQGGVY---LPINRRQKVYSN---GTLIIENLQKEFDGGTYTCQAKNNQRATARRNVEI 446
Query: 176 -VEGPPG--LPGGVQVVEVHKTSATIQWTDG 203
+ PP L + + E + + T Q +G
Sbjct: 447 HIMVPPKILLTQDITLREGMRAAITCQIIEG 477
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 35 GRRKIFENGNLLISPVSRDDS-GIYSCTATN-VHGMDESK---GRLIVLHGPSYYEQLPP 89
G+ +F+ G L + V +D YSC N + G +S LIV E + P
Sbjct: 20 GKYTVFKTGELYVFNVDHEDGYKSYSCRTVNKLTGKIQSSYYPAHLIVTE---INENVQP 76
Query: 90 KITIAAH--------RNLQLRCSAHTEELLDVAYIWTHNGVR-----IGNMDLNELETPN 136
+I++ H ++ C A D Y W N I N +NEL
Sbjct: 77 RISVQRHSTKYSKIGEDVIFSCIAQGFPTPD--YKWFKNEKEQFLPLIFNERINELAP-- 132
Query: 137 INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG--LPGGVQVVEVH 192
GLL I+ D G+Y C+ ++ GK S + ++V P + +Q+V+V+
Sbjct: 133 -----GLLLISKIKLDDKGKYVCMANNSAGKDSVQINLVVTAPLSVHIQPQIQIVDVN 185
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 36 RRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAA 95
R++I G + V GIY T + ES+ V PS ++P KI ++
Sbjct: 1114 RKEILNPGIEIYETVRNQKKGIYKFWVTASTKIGESQRSTTVTIYPS--NEIPAKI-MSF 1170
Query: 96 HRNL------QLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149
++N+ +L + + + IW +I N + + ++ N DG L+ I +
Sbjct: 1171 NKNVITPWKEKLNLTCLNVGIPNPNLIWKFKSTQIKNTN-SRIQVQN---DGSLI-IKDV 1225
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQW 200
D G Y C V++ GK +I+E PP P + VV S ++W
Sbjct: 1226 QKMDEGNYSCSVENVYGKDEIIYNLIIEVPPERP-KLSVVSSTSDSLQLEW 1275
>gi|395838782|ref|XP_003792285.1| PREDICTED: neurofascin isoform 2 [Otolemur garnettii]
Length = 1261
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 198/443 (44%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 473 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 530
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IG+
Sbjct: 531 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGS 589
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 590 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQVTPTNR 640
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 641 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 694
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 695 -VWHDHSKFPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 752
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + N +
Sbjct: 753 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWSNATVWGS 805
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + V +S ED+P AP+ R N IN+
Sbjct: 806 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPS-APRRFRVRQPNLETINL 864
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G L G+ ++Y
Sbjct: 865 EWD----HPEHPNGILTGYTLRY 883
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 118/565 (20%), Positives = 203/565 (35%), Gaps = 89/565 (15%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 372 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 429
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 430 NTSNEHGYLLANAFVSVL-------DVPPRM--MSPRNQLIRVILYNRTRLDCPFFGSPI 480
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 481 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 535
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 536 RLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSW---LKDDEPLYIGSRMK 592
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVP--WSTYEFKVIAGNELGYGEPSS 275
+ + + T F V+E G YT ++ L + +V N L +
Sbjct: 593 KEDDSLTIFGVAERDQGS----YTCVASTELDQDLAKAYLTVLADQVTPTNRLA----AL 644
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 335
P + + P D + + S+ +P + N+P Y + + + +F
Sbjct: 645 PKGRPDRPRDLELT----------DLAERSVRLTWIPGDDNNSPITDYVVQFE---EDQF 691
Query: 336 QSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAED 388
Q ++ G+V AV+R+ Y Y+ +V AIN+VG P SE A
Sbjct: 692 QPGVWHDHSKFPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRTSGAP- 747
Query: 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
P+ P V G + +TW P+ G ++Y + ET + +
Sbjct: 748 -PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETREAWSNA 800
Query: 449 TTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507
T +VG P Y ++V A N+ G+GPE + + + P P ++ N
Sbjct: 801 TVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSA-PRRFRVRQPNL 859
Query: 508 TTVHVTWRYVSPSFEEEPIIGYKVR 532
T+++ W + P + GY +R
Sbjct: 860 ETINLEWDH--PEHPNGILTGYTLR 882
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 282 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 339
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 340 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 396
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 397 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 452
Query: 182 L 182
+
Sbjct: 453 M 453
>gi|297701681|ref|XP_002827834.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-2 [Pongo abelii]
Length = 2177
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 249/598 (41%), Gaps = 59/598 (9%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 439 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 498
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE L+V + + P ++ + C + + + YIW
Sbjct: 499 CLATNSRGVDEXSADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 557
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 558 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 612
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y + N N+ W V+
Sbjct: 613 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYVLEMSEN-NAPW-----TVLLAS 666
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 667 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 723
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 724 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 783
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + P G+
Sbjct: 784 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGGPPCCTLGL---------------- 822
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
E+ + HR+ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 823 -----ESPPQAKLPHRLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 877
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 878 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 934
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 935 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 990
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1407 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGXWALHSASVSHNASS 1465
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1466 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1513
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1514 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1573
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1574 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1633
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1634 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1691
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1692 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1747
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1748 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1804
Query: 570 RVLA 573
R+ A
Sbjct: 1805 RIRA 1808
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 952 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1008
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1009 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1062
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1063 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1121
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ E+ +
Sbjct: 1122 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVEREYTIEDLEEW 1173
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1174 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWS--EVPEA 1231
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D + + + + A + GL Y V+V+A+ G+G
Sbjct: 1232 DRNGLVLGYKVIYKEKDLDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1291
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1292 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1341
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1061 MEVPDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1120
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
W P+ + N +G++IKY + D +T + + I L+ T+Y V+V
Sbjct: 1121 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVEREYTIEDLEEWTEYRVQV 1180
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N G GP S+ + RT P P+ V +++ V W V + ++GY
Sbjct: 1181 QAFNAIGSGPWSQTVVGRTRESVPSSGPANVSALATTSSSMLVRWSEVPEADRNGLVLGY 1240
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
KV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1241 KVIYKEKDLD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1297
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1097 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1154
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1155 -HVVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1206
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D + Q GN +
Sbjct: 1207 GPANVSALATTSSSMLVRWSEVPEADRNGLVLGYKVIYKEK-DLDTQPRFWLVEGNSSRS 1265
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1266 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1323
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1324 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1379
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1380 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1437
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ + V + + IVD L P Y RV A ++ GD
Sbjct: 1438 RYYTIQTRELPSGXWALHSA--SVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1489
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1600 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1658
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1659 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1713
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1714 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1768
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1769 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1826
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1827 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1884
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1885 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1920
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1837 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1893
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1894 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1927
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 350 VDIPCRAKGVPPPSITWYKDAAVVEVEKLARFRQRSDGGLQISGLLPDDTGMFQCFARNA 409
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 410 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 466
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 467 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEXSADLVV 516
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 151 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 210
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 211 NDKNGDNKTSQPITLAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 270
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + ++AG YEC + S+V +
Sbjct: 271 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTGSNAGYYECEAVLRSSSVPSVV 321
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 322 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDA 370
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + L+P T F+ A N G
Sbjct: 371 AVVEVEKLARFRQRSDGGLQISGLLPDDTGMFQCFARNAAG 411
>gi|393905222|gb|EJD73902.1| immunoglobulin I-set domain-containing protein [Loa loa]
Length = 1181
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 148/578 (25%), Positives = 251/578 (43%), Gaps = 83/578 (14%)
Query: 8 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C+ +AAP+ W D + G+ IF N L +S V+ D G+Y C +N
Sbjct: 444 VEMSCDVDAAPEAVVKWVDANDHPLAVVLGKIHIFRNHTLRLSQVNSADEGLYYCNVSNK 503
Query: 66 HGMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
+G++ + RL V P+++ ++P K+ + AH +++ C A + L + Y WT NG+
Sbjct: 504 YGINRAVNRLQVF-SPTHFIRVPSPKKLILEAHESVEYICEAVCDPRLTIEYSWTRNGIP 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--P 180
I + + ++N L I +A +G +C+ + V KIS +++ P P
Sbjct: 563 IN----DSVHFKSLN---NSLLIVDARGIHSGVIDCIALTNVDVKISGVELTVLDVPDAP 615
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
+ G + ++ A + W +G I + + T + + + V+ KE
Sbjct: 616 IVTG----INCNERRAMLSWRRPVDHGDQIKQFLVQMHTEFEE---GLWQTVVEKE---N 665
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGG 299
T ++ L PW Y F+VIA N G EP +T A P+ P + G
Sbjct: 666 TAADFYQVDIALSPWVNYTFRVIARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGS 725
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I W+P+ + N P + Y + +R E +E E VVR F
Sbjct: 726 EPSNIIIEWKPMNKYDWNGPGLQYIVRYRLNEPGETWTEIRIEDPLANHTVVREQPTF-- 783
Query: 360 TEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIE 415
EY V+V+++N GP P S V +S ED P ++P S+ N TA+ + W ++
Sbjct: 784 REYLVQVESLNSFGPAIVKPAS--VKGYSGEDTPLLSPVDFSVSKFINCTAVLLMWKHVD 841
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYL-SRTTRNWALIVGLQPDTKYYVKVMAYNN 474
R+ +RG G+ I+YW+ + P A+ + + N ++ GL P T Y ++ N+
Sbjct: 842 --RDTVRGHFKGYLIEYWENEKP--FAIMNVGAEKHENETILYGLNPITNYTARIRTANS 897
Query: 475 --AGEGPESERYLERTYRKAPQKPPSAVH---IKGINPTTVHVTWR-------YVSPSF- 521
E P + ++ P+ PS VH ++ + +++VTW YV F
Sbjct: 898 RYLSESPSTVKF------ATPEGIPSKVHNMRVRAVGARSLYVTWEPPRQPNGYVRGYFI 951
Query: 522 -------------------------EEEPIIGYKVRVW 534
E EP GYKV VW
Sbjct: 952 TFENSSTGTKEETFVLNRQLYYLNEEGEPDTGYKVSVW 989
>gi|322787037|gb|EFZ13261.1| hypothetical protein SINV_11265 [Solenopsis invicta]
Length = 1358
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 144/607 (23%), Positives = 250/607 (41%), Gaps = 39/607 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN---------IIGSGGRRKIFENGNLLISPVSRDDS 55
G + + C + P P+ W + + GS GR I NG+L + D
Sbjct: 305 GNPLNVHCEAKGFPPPRITWLRARGRTSNDYQPLVDGSDGRLTILPNGSLWTASAGPQDE 364
Query: 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G Y C A N G SK + +H P+ +E +TI ++ + C+ + ++V
Sbjct: 365 GYYLCRANNAIGSGLSKVIYVSVHEPARFEFQSKNVTIRRGESVTIDCTVIGDNPIEVQ- 423
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKT 172
W HN R+ +M + L I D GL L I N+ D+G Y C + G+
Sbjct: 424 -WMHNSDRL-DMSNHRLSIGQIKTDNGLKSQLSIANSDRQDSGVYRCTADNAYGRSEHLI 481
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIART---NWNSTWFNVS 229
+ V+ P P G++V+E+ S + W PI +Y I R+ W V
Sbjct: 482 YLAVQERPDPPAGLEVIEIGSRSIRLLWKRAFDGNSPIRNYVIQYRSLSHGMTDDWNPVK 541
Query: 230 EHVI---------GKEVDRYTG-RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
H + G TG +E ++ L P TY F++ A N + P+ +
Sbjct: 542 THNVTYTPGSSNSGLSPFETTGDDQEVALVGGLHPAVTYTFRIFAINSIDASGPTE-AVV 600
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF---Q 336
T + P + P I G+L +SW+ P+E N + Y + W + + + Q
Sbjct: 601 AKTQEEAPTEPPQSIKVQSAGPGELMVSWQSPPKESCNGDLLGYIVTWSEHSSSTSGVNQ 660
Query: 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQG 396
S++L G V++ +T+Y++ ++A N + GP S + + E +P+ P
Sbjct: 661 SKSLTVNG-WATTKVQLTGLRKFTKYDISIRAFNSIASGPASAPIVGTTQEGVPETPPTQ 719
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW--KEDNPEETAVYYLSRTTRNWA 454
V +S ++ V+W+ + G + G+++ Y DN + + V + RT+
Sbjct: 720 VTCVPLSSQSVKVSWSAPPPHQHG--GIIQGYKVYYRPVPTDNMDISTVGEVKRTSSMDT 777
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+ L T Y +KV+AY AG+G S T P PP + + ++ V+W
Sbjct: 778 YLHTLYKYTNYSIKVLAYTGAGDGALSPPIFCMTEEDVP-GPPGGIKALALTAESILVSW 836
Query: 515 R-YVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+ P+ Y + + +D + +TL ++ DL + Y V A
Sbjct: 837 LPPLQPNGNVSKYTVYSREAGSKNHNAHTMHDPPLSPTDTLTMELRDLVERQLYEFWVSA 896
Query: 574 FSNGGDG 580
+ G+G
Sbjct: 897 TTGLGEG 903
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 19/243 (7%)
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
Y ++ AIN + +E V + E+ P PQ + + + V+W +E+
Sbjct: 580 YTFRIFAINSIDASGPTEAVVAKTQEEAPTEPPQSIKVQSAGPGELMVSWQSPP--KESC 637
Query: 422 RGRLIGHRIKYWKEDNPEETAV-YYLSRTTRNWAL----IVGLQPDTKYYVKVMAYNNAG 476
G L+G+ I W E + + V S T WA + GL+ TKY + + A+N+
Sbjct: 638 NGDLLGY-IVTWSEHSSSTSGVNQSKSLTVNGWATTKVQLTGLRKFTKYDISIRAFNSIA 696
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
GP S + T P+ PP+ V ++ +V V+W P I GYKV V
Sbjct: 697 SGPASAPIVGTTQEGVPETPPTQVTCVPLSSQSVKVSWSAPPPHQHGGIIQGYKVYYRPV 756
Query: 537 DQDMSRANDTIIPVG-----NTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D N I VG +++D + L Y ++VLA++ GDG +S P F M
Sbjct: 757 PTD----NMDISTVGEVKRTSSMDTYLHTLYKYTNYSIKVLAYTGAGDGALSPP--IFCM 810
Query: 592 GEE 594
EE
Sbjct: 811 TEE 813
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGN--IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G T+ C E P W DG + R ++ L+I V R D G+Y C
Sbjct: 29 GETATMNCTVEGYPVESVEWLHDGVPVLTAQDTRIRLLAPLVLVIGSVGRRDKGMYQCLV 88
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+ ++ L L GP Y + P IA ++ + C + V WT G
Sbjct: 89 RSDKENAQATAEL-KLGGPPYIRSIGPVRAIAG-VDITIACPYSGYPITSVG--WTRGGA 144
Query: 123 RIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVI-VEGPP 180
+ D+ + +D G L I DAG Y C+V+++ G+ + + ++ V PP
Sbjct: 145 EL-PFDIRQ------RVDSEGHLTILTVDPNDAGTYTCIVRASSGETANRDILLTVNSPP 197
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 6/177 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++TI C P W + G + R+++ G+L I V +D+G Y+C
Sbjct: 120 GVDITIACPYSGYPITSVGWTRGGAELPFDIRQRVDSEGHLTILTVDPNDAGTYTCIVRA 179
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ L+ ++ P Q+ CS + + L + W +G +
Sbjct: 180 SSGETANRDILLTVNSPPVMSPFNFPANSQEGSRAQVTCSVTSGD-LPIYISWLKDGEPL 238
Query: 125 -GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
++ + E +I L S +G+Y CV ++ K++ ++V+ PP
Sbjct: 239 PSSLRIEERGAEFFSI----LVFKELSSRHSGKYTCVATNSAAKVNHTAELLVKVPP 291
>gi|291244142|ref|XP_002741959.1| PREDICTED: sidekick 2-like [Saccoglossus kowalevskii]
Length = 2107
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 148/599 (24%), Positives = 240/599 (40%), Gaps = 48/599 (8%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGS-------------GGRRKIFENGNLLISPVS 51
G + C +P P +WKKD ++G + NG+L+IS
Sbjct: 422 GSTARLHCGYSGSPAPDVIWKKDDTVVGRWNGSGSGLGIIPVSSTINVMSNGDLIISTAK 481
Query: 52 RDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111
DSG+Y+CT N + L V + P + + +C + +
Sbjct: 482 VADSGLYTCTVVNNVASVTASATLTV-QVKTRISDPPKDMEVIKGSTGIFQCGVLHDSNV 540
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
V +W N V I DL+ ++ DG L +I A D G Y C V S G +
Sbjct: 541 AVRILWLMNNVEI---DLSSSNRISVLYDGSL-KIAGARSDDIGNYTCTVTSPGGNDART 596
Query: 172 TTVIVEGPPGLPGGVQVVEV--HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+++V P P + V + S +QW + + I YK+ + N W +
Sbjct: 597 ASLVVIELPFAPQFLHAVLSIDQRRSIDLQWLESFDGNKAILRYKVFRKENAEIVWTLIM 656
Query: 230 EHVIGKEVDRYTGRKEASIENV-----LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
+V +EN+ L P Y F V A NELG G S PS P
Sbjct: 657 SNV------------APGVENIVTIPDLTPSYQYAFAVSAVNELGEGPLSDPSNNVTLPV 704
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYG 344
+ P AP + + I W+ P++K N P Y+I +R K + + ++
Sbjct: 705 EPPDAAPQGVVASPRSSSSIRIQWQAPPQDKWNGPLTGYRIRYRLKGYSS-SPYSYQDIY 763
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
N + + YE+++ A N +GPG S V+ + + E +P APQ V + +S
Sbjct: 764 NPQQQSYELTDLITWDTYEIQIAANNSMGPGVYSLVIIVRTLEGVPTEAPQVVVTHANSS 823
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQP 461
T+I W + + I G G+++K W+ NP+ V + + + I GL+
Sbjct: 824 TSIFFQW--MSPSPQKIFGVNQGYKLKAWEPSNPDYKVVKVVPPNPQYSLQENYITGLKK 881
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T Y V+ Y AG+GPES+ T++ P P + I ++ V W P
Sbjct: 882 FTVYLTSVLCYTRAGDGPESDELQVETFQDVP-GPVGDLRFFDIYDDSLKVDW--TEPEE 938
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+IGY V E + + ++ I +T+ + L+ Y + V A + G G
Sbjct: 939 INGILIGYTVGWQEYNISSTYQSEEI--SSDTVVYTVTGLTQLTTYEIMVSASTQMGAG 995
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 38/346 (10%)
Query: 157 YECVVKST--VGKISTKTTVIVEG-PPGLPGG---VQVVEVHKTSATIQWTDGATNGRPI 210
YE +V ++ +G T + I G PP LP V + V S IQ+T G I
Sbjct: 982 YEIMVSASTQMGAGPTVVSTISSGVPPELPTNPVNVVISNVQARSVNIQFTPGYNGKTSI 1041
Query: 211 THYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+K+ A+ N W EH + + L+P++ Y +V A N +G
Sbjct: 1042 NTWKVEAQINGAEQWVTHYEH--------HDPDALGFVVPDLLPYTKYILRVTAINVVGA 1093
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
PS P+ ++ T D P AP+ + L+ISW PL RE+ N + Y++ WR K
Sbjct: 1094 SHPSDPTSEFETLQDYPSTAPASVTVRANSETSLTISWIPLTREQWNGVPLGYRVSWRSK 1153
Query: 331 --------NDTEFQSETLKEYGNVG-IAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 381
++ FQS + +Y +G V+ E+ + YEVKV A N G GP S+++
Sbjct: 1154 PTVVKRSLSNGYFQSVNIDDY--IGRTYVIEDLEEWMW--YEVKVLAYNAKGNGPYSDII 1209
Query: 382 TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET 441
+ + +P PQ V + ST I++ W +++ + + G ++G+++ Y + ++
Sbjct: 1210 EERTGDSVPSAGPQNVVAVSTGSTTIDIAW--VDIPQSDQNGEILGYKVLYCESFADVDS 1267
Query: 442 AVYY-----LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
YY SR+TR + L+ Y ++V+ Y G G SE
Sbjct: 1268 CEYYDITDNSSRSTR----LSNLKKYVTYDIQVLGYTRIGNGVLSE 1309
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 125/290 (43%), Gaps = 23/290 (7%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L P+STY+F+V A N++G S PS T D P +P+ L + W P
Sbjct: 1459 LSPYSTYQFRVQAHNDVGASYYSIPSEPITTLQDFPEDSPTITDVIPYTATSLRVIWRPP 1518
Query: 312 PREK----QNAPNIYYKIFWRKKNDTEFQSET-LKEYGNVGIAVVRIPSEFYYTEYEVKV 366
E N I YKI + S+T L+++ +++ Y YE+ +
Sbjct: 1519 ASEDINGILNGFKIQYKILRQISYMEHVISDTRLRQFDLTDLSI--------YENYEIVM 1570
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
+ N +G GP S TI+ E +P AP V + T I VTW E G L
Sbjct: 1571 RVFNIIGEGPPSAPYTIYVGEAIPTAAPDDVSAVPIGPTQIRVTWK--EPPENTQNGGLQ 1628
Query: 427 GHRIKYWK-----EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
G++I YWK ++ E + L+ L T Y ++V+ +N AG+GP+S
Sbjct: 1629 GYKIFYWKVSDEGDNIDNEHQMMRPVGVELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKS 1688
Query: 482 ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
RT + P P + K I V+VTW SP IIGY+V
Sbjct: 1689 AVIRVRTDQTLPGTPGPLIFTK-ITMNAVNVTW--ASPIKPNGIIIGYQV 1735
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 10/250 (4%)
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTW 411
+P YT+Y ++V AIN VG S+ + F + +D P AP V R + T++ ++W
Sbjct: 1072 VPDLLPYTKYILRVTAINVVGASHPSDPTSEFETLQDYPSTAPASVTVRANSETSLTISW 1131
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAV---YYLSRTTRNWA----LIVGLQPDTK 464
P L RE G +G+R+ + + + ++ Y+ S ++ +I L+
Sbjct: 1132 IP--LTREQWNGVPLGYRVSWRSKPTVVKRSLSNGYFQSVNIDDYIGRTYVIEDLEEWMW 1189
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y VKV+AYN G GP S+ ERT P P V TT+ + W + S +
Sbjct: 1190 YEVKVLAYNAKGNGPYSDIIEERTGDSVPSAGPQNVVAVSTGSTTIDIAWVDIPQSDQNG 1249
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
I+GYKV E D+ I ++ + +L Y ++VL ++ G+G +S
Sbjct: 1250 EILGYKVLYCESFADVDSCEYYDITDNSSRSTRLSNLKKYVTYDIQVLGYTRIGNGVLSE 1309
Query: 585 PAITFQMGEE 594
PA + E+
Sbjct: 1310 PAARIRTDED 1319
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 166/416 (39%), Gaps = 52/416 (12%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G+ V + A +QW D +T +KI + + ++ + G E
Sbjct: 1318 EDVPGPVTGILFPNVSNSYAKVQWEDPPERNGILTKFKISYKLMSDD-----AQIIDGTE 1372
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+D T EAS N YEF + A LG+GEP+ D P Q+P
Sbjct: 1373 LDINTHSYEASNLNAQ---EYYEFTISAATRLGWGEPAVALVLTVNNRDPP-QSPF---- 1424
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE 356
G I D +Q + + W + +D GN I I
Sbjct: 1425 --GLIVD-----------RQLVFSRSIALLWSRGSD-----------GNSPIRYFTIQLS 1460
Query: 357 FYYTEYEVKVQAINDVGPG----PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
Y T Y+ +VQA NDVG P + T+ +D P+ +P + +T++ V W
Sbjct: 1461 PYST-YQFRVQAHNDVGASYYSIPSEPITTL---QDFPEDSPTITDVIPYTATSLRVIWR 1516
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P E+I G L G +I+Y K + +S T + L Y + + +
Sbjct: 1517 PPA--SEDINGILNGFKIQY-KILRQISYMEHVISDTRLRQFDLTDLSIYENYEIVMRVF 1573
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N GEGP S Y P P V I PT + VTW+ + + + GYK+
Sbjct: 1574 NIIGEGPPSAPYTIYVGEAIPTAAPDDVSAVPIGPTQIRVTWKEPPENTQNGGLQGYKIF 1633
Query: 533 VWEVDQD---MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
W+V + + + + PVG L ++D L Y ++VL F+ GDG S+
Sbjct: 1634 YWKVSDEGDNIDNEHQMMRPVGVELTEVLLDQLVSYTNYKIQVLGFNAAGDGPKSA 1689
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 27/187 (14%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK--IFENGNLLISPVSRDDSGIYSCTATNV 65
+ I C P+P + W ++G + + G + + G+L I+ + +D ++ C A+NV
Sbjct: 332 IEIPCKASGVPEPMYKWYQNGIDVSTLGNNRFIVLSTGSLQITSLHAEDQAMFQCFASNV 391
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKIT-------IAAHRNLQLRCSAHTEELLDVAYIWT 118
L V E+L P IT + A +L C DV IW
Sbjct: 392 VADISVSTWLQV-------ERLAPNITNPPNDTSVLAGSTARLHCGYSGSPAPDV--IWK 442
Query: 119 HNGVRIGNMD--------LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
+ +G + + T N+ +G L+ I+ A AD+G Y C V + V ++
Sbjct: 443 KDDTVVGRWNGSGSGLGIIPVSSTINVMSNGDLI-ISTAKVADSGLYTCTVVNNVASVTA 501
Query: 171 KTTVIVE 177
T+ V+
Sbjct: 502 SATLTVQ 508
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 12/156 (7%)
Query: 23 VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-TATNVHGMDESKGRLIVLHGP 81
+WK++G I + I L +P S D+ G+Y C + H + +
Sbjct: 260 LWKRNGMTISQSANKLI------LFNPSSIDE-GVYECEVSLQYHSYSSVRATATISMRT 312
Query: 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141
L P N + + + Y W NG+ + + N I +
Sbjct: 313 EPVWMLSPVAVTTGDVNEPIEIPCKASGVPEPMYKWYQNGIDVSTLGNNRF----IVLST 368
Query: 142 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
G L+IT+ D ++C + V IS T + VE
Sbjct: 369 GSLQITSLHAEDQAMFQCFASNVVADISVSTWLQVE 404
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
E G T+ C +P K+ WKK + + N V DSG Y C
Sbjct: 47 AESGAATLTCTASGSPPIKYQWKKGSSYVSQPSPVSYHPLNN-----VDTFDSGEYYCVV 101
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRC---SAHTEELLDVAYIWTH 119
+N G S ++ + Y+ P ++ A +++L C + D W
Sbjct: 102 SNPVGSVISSAAVVQVAYIREYQGGPTTFSVNAGYSIELECPQLDTLPDSSPDFHLTWKK 161
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ I ++ I++D L+ I +AS ++ G+Y C +TV
Sbjct: 162 DNFPINGGNV------VISLDHKLV-ILSASESNEGQYHCSALNTV 200
>gi|312083710|ref|XP_003143976.1| hypothetical protein LOAG_08396 [Loa loa]
Length = 792
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 148/578 (25%), Positives = 251/578 (43%), Gaps = 83/578 (14%)
Query: 8 VTIFCNPEAAPKPKFVW--KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C+ +AAP+ W D + G+ IF N L +S V+ D G+Y C +N
Sbjct: 65 VEMSCDVDAAPEAVVKWVDANDHPLAVVLGKIHIFRNHTLRLSQVNSADEGLYYCNVSNK 124
Query: 66 HGMDESKGRLIVLHGPSYYEQLPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
+G++ + RL V P+++ ++P K+ + AH +++ C A + L + Y WT NG+
Sbjct: 125 YGINRAVNRLQVF-SPTHFIRVPSPKKLILEAHESVEYICEAVCDPRLTIEYSWTRNGIP 183
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG-KISTKTTVIVEGP--P 180
I + +++ LL I +A +G +C+ + V KIS +++ P P
Sbjct: 184 IND------SVHFKSLNNSLL-IVDARGIHSGVIDCIALTNVDVKISGVELTVLDVPDAP 236
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
+ G + ++ A + W +G I + + T + + + V+ KE
Sbjct: 237 IVTG----INCNERRAMLSWRRPVDHGDQIKQFLVQMHTEFEEGLW---QTVVEKE---N 286
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS-SPSPQYNTPADKPYQAPSRIGGGGG 299
T ++ L PW Y F+VIA N G EP +T A P+ P + G
Sbjct: 287 TAADFYQVDIALSPWVNYTFRVIARNSRGESEPGFKEGIVCSTKAYYPFTNPKDVRAEGS 346
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I W+P+ + N P + Y + +R E +E E VVR F
Sbjct: 347 EPSNIIIEWKPMNKYDWNGPGLQYIVRYRLNEPGETWTEIRIEDPLANHTVVREQPTF-- 404
Query: 360 TEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGV-FSRGFNSTAINVTWNPIE 415
EY V+V+++N GP P S V +S ED P ++P S+ N TA+ + W ++
Sbjct: 405 REYLVQVESLNSFGPAIVKPAS--VKGYSGEDTPLLSPVDFSVSKFINCTAVLLMWKHVD 462
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYL-SRTTRNWALIVGLQPDTKYYVKVMAYNN 474
R+ +RG G+ I+YW+ + P A+ + + N ++ GL P T Y ++ N+
Sbjct: 463 --RDTVRGHFKGYLIEYWENEKP--FAIMNVGAEKHENETILYGLNPITNYTARIRTANS 518
Query: 475 --AGEGPESERYLERTYRKAPQKPPSAVH---IKGINPTTVHVTWR-------YVSPSF- 521
E P + ++ P+ PS VH ++ + +++VTW YV F
Sbjct: 519 RYLSESPSTVKF------ATPEGIPSKVHNMRVRAVGARSLYVTWEPPRQPNGYVRGYFI 572
Query: 522 -------------------------EEEPIIGYKVRVW 534
E EP GYKV VW
Sbjct: 573 TFENSSTGTKEETFVLNRQLYYLNEEGEPDTGYKVSVW 610
>gi|426255462|ref|XP_004021367.1| PREDICTED: LOW QUALITY PROTEIN: protein sidekick-1 [Ovis aries]
Length = 2344
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 220/523 (42%), Gaps = 33/523 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C AP+P VW + +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 471 DGMTAVLRCEVSGAPRPAIVWSRGSHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 530
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + + L C A + + + Y+W
Sbjct: 531 CHAANSEGSLNASATLTVWNRTSIVTP-PEDLVVIKGTTATLHCGATHDPRISLRYVWKK 589
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG LL I+ D G+Y C V S G S + V
Sbjct: 590 DNVVIAPSSSSRVV---VEKDGSLL-ISQTWSGDIGDYTCGVISEGGNDSRTARLEVIEL 645
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + H + + W P+ +Y I+ + NS W V + E+
Sbjct: 646 PHSPQNLVASLTPAHGHAVVLSWVRPFDGNSPVLYY-IVELSENNSPW-KVHLSDVSPEM 703
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T R L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 704 TSVTVRG-------LTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 756
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + ++ +
Sbjct: 757 GRTNQSIMVQWQPPPEPEHNGALRGYVLRYRLAGLPGEYQQRNIS---SPEVSYCLVTEL 813
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S V ++ + +P PQ V NST I WNP
Sbjct: 814 IVWTQYEIQVAAYNGAGLGVFSRAVAEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPP- 872
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W +D PE V ++ + I L+ T Y+ V+ +
Sbjct: 873 -QQFINGINQGYKLLAWPDDVPEAVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTT 931
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWR 515
G+GP S L T+ KP + H+ I T++ V+W+
Sbjct: 932 PGDGPPSTPQLIWTHE---DKPGAVGHLSFTEILDTSLKVSWQ 971
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 2/239 (0%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ IP YT Y +++ +N VG GP S+ + + + P VAP + R + T++
Sbjct: 1209 MLEIPDLTPYTHYRFRMRQVNVVGAGPFSQSSRVIQTLQAPPDVAPTSITVRTASETSLR 1268
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+R+K+W D P +S + GL+ T+Y ++
Sbjct: 1269 LRWVPLPDSQYNGNPESVGYRVKWWCPDLPSVVQTQVISDRLEREFTVEGLEEWTEYALQ 1328
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP S RT P P V + ++ T + +TW V + I+G
Sbjct: 1329 MQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILG 1388
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D ++ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1389 YKILFRAKDLD-PEPRSHVVRGNHTQSALLAGLGKFVLYELQVLAFTRIGNGVPSAPPI 1446
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 177/420 (42%), Gaps = 47/420 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNSTWFNVSEHVIGKE 236
PG P + + + SAT+Q+ G I+ + + + W + E
Sbjct: 1147 PGAPSNLVISNISPRSATLQFRPGYDGKTAISRWIVQGQVGAVGDEEEWVTLCEE----- 1201
Query: 237 VDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+A + + L P++ Y F++ N +G G S S T P AP+ I
Sbjct: 1202 ----ENEPDAQMLEIPDLTPYTHYRFRMRQVNVVGAGPFSQSSRVIQTLQAPPDVAPTSI 1257
Query: 295 GGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVV 351
L + W PLP + N ++ Y++ +W + Q++ + +
Sbjct: 1258 TVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKWWCPDLPSVVQTQVISD--------- 1308
Query: 352 RIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
R+ EF +TEY +++QA N +G GP S V + E +P AP+ V + +ST
Sbjct: 1309 RLEREFTVEGLEEWTEYALQMQAFNAIGAGPWSAAVRGRTRESVPSAAPENVSAEAVSST 1368
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
I +TW + +N G ++G++I + +D E + + AL+ GL Y
Sbjct: 1369 QILLTWASVPEQDQN--GLILGYKILFRAKDLDPEPRSHVVRGNHTQSALLAGLGKFVLY 1426
Query: 466 YVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
++V+A+ G G P + LERT AP PP + + T+V + W+ EE
Sbjct: 1427 ELQVLAFTRIGNGVPSAPPILERTKDDAP-GPPVRLVFPEVRLTSVRIVWQP-----PEE 1480
Query: 525 P---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDG 580
P I+GY++ S T + VG T+ +L+P Y R+ A + G G
Sbjct: 1481 PNGIILGYQIAYRLASS--SPNTFTTVEVGATVRQFTATELAPESAYVFRLSAKTRQGWG 1538
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Query: 362 YEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
Y+ +V A+N VG G S E + E+ P P+ + + G + +I V W P N
Sbjct: 717 YQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQSIMVQWQPPPEPEHN 776
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
G L G+ ++Y P E +S ++ L+ L T+Y ++V AYN AG G
Sbjct: 777 --GALRGYVLRYRLAGLPGEYQQRNISSPEVSYCLVTELIVWTQYEIQVAAYNGAGLGVF 834
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
S E T + P PP V ++ +N TT+ W F GYK+ W D
Sbjct: 835 SRAVAEYTLQGVPTAPPQNVQVEAVNSTTIQFLWNPPPQQFINGINQGYKLLAWPDDVPE 894
Query: 541 SRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ TI P + + I +L Y VL F+ GDG S+P +
Sbjct: 895 AVTVVTIAPDFHGVHHGYITNLKKFTAYFTSVLCFTTPGDGPPSTPQL 942
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 16/177 (9%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
NV I C P P W KD I R ++ G L + + +DSGI+ C A+N
Sbjct: 381 NVDIVCEAMGVPPPALRWFKDAVSINMLQNPRYQVLAGGGLRVRQLRPEDSGIFQCLASN 440
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV-----AYIWTH 119
G ++ L V + + QLP T+ LRC + ++I
Sbjct: 441 AGGEVQTHTYLDVTNVAPAFTQLPVDTTVTDGMTAVLRCEVSGAPRPAIVWSRGSHILAS 500
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
VRI L ++ G L+I DAG Y C ++ G ++ T+ V
Sbjct: 501 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCHAANSEGSLNASATLTV 548
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 111/291 (38%), Gaps = 31/291 (10%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
P +PG ++W G+ PI ++ + R W +
Sbjct: 1568 PSVPGQRXXXXXXXXXLWLRWVPGSDGASPIRYFTLQLRELPGGPWPGTRAFTQHRLAPG 1627
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
AS++ VL P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1628 LASSGRASLQ-VLRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPRSVSVTPR 1686
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRK---KNDTEFQSETLK-------------EY 343
+ I W+P E N Y+I++R+ + +S+TLK +
Sbjct: 1687 TTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAAPATESKTLKTPSALRAELTGEGSF 1746
Query: 344 GNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGV 397
G A P Y YEV + A N +G GP S V + P APQ V
Sbjct: 1747 LRKGRAPSCXPCPLTLADLKKYRRYEVVLTAYNVIGEGPASVPVGALPGDSAPAQAPQRV 1806
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR 448
++ + VTW P +N G + G++ +P AV+ L R
Sbjct: 1807 QVNPLTASQLEVTWEPPPPESQN--GNIQGYKA------SPSRGAVFPLGR 1849
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 2084 AEGSPGSPRDVSVTK-STSELTLQWTEGRAGRTPTTGYVIEARPSDEGLW-----DMFAK 2137
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ + S++ L TYEF+V+A N+ GYGEPSSPS + + P+
Sbjct: 2138 DIPQGATSYTVSLDQ-LRQGVTYEFRVVAVNQAGYGEPSSPSAAVSAQVETPF 2189
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 154/406 (37%), Gaps = 77/406 (18%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1455 PGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNTFTTVE--VGATVR 1512
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + T + P + G
Sbjct: 1513 QFTATE-------LAPESAYVFRLSAKTRQGWGEPLEAT-VITTEKRGETRRPDSVSASG 1564
Query: 299 GK--------------IGDLSISWEPLPREKQNAPNIYYKIFWRK---------KNDTEF 335
G+ L + W +P +P Y+ + R+ + T+
Sbjct: 1565 GERPSVPGQRXXXXXXXXXLWLRW--VPGSDGASPIRYFTLQLRELPGGPWPGTRAFTQH 1622
Query: 336 Q-SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQ 391
+ + L G + V+R +T Y+++++A ND+G E+E VT +D+P
Sbjct: 1623 RLAPGLASSGRASLQVLRP-----FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPG 1675
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 451
P+ V ++++ + W P E++ G L G+RI Y + + E A S+T +
Sbjct: 1676 EPPRSVSVTPRTTSSVLIQWQPPR--DESLNGLLQGYRIYYRELEY--EAAPATESKTLK 1731
Query: 452 NWALI--------------------------VGLQPDTKYYVKVMAYNNAGEGPESERYL 485
+ + L+ +Y V + AYN GEGP S
Sbjct: 1732 TPSALRAELTGEGSFLRKGRAPSCXPCPLTLADLKKYRRYEVVLTAYNVIGEGPASVPVG 1791
Query: 486 ERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
AP + P V + + + + VTW P + I GYK
Sbjct: 1792 ALPGDSAPAQAPQRVQVNPLTASQLEVTWEPPPPESQNGNIQGYKA 1837
>gi|194378202|dbj|BAG57851.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 167/340 (49%), Gaps = 12/340 (3%)
Query: 245 EASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDL 304
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +L
Sbjct: 2 ESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHEL 61
Query: 305 SISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEV 364
I+WEP+ E QN Y + +R N T E + + R S T +EV
Sbjct: 62 VIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEV 120
Query: 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR 424
KV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ GR
Sbjct: 121 KVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-GR 176
Query: 425 LIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484
G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 177 PQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSEV 236
Query: 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN 544
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 237 SATTKKSPPSQAPSNLRWEQQG-SQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQVI 295
Query: 545 DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 296 ET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 329
>gi|350396480|ref|XP_003484566.1| PREDICTED: Down syndrome cell adhesion molecule-like protein
CG42256-like [Bombus impatiens]
Length = 2165
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 250/613 (40%), Gaps = 46/613 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRK--IFENGNLLISPVSRDDS 55
G V+I C E P P WK+ D +G G + NG+L+IS VSRD +
Sbjct: 895 GHGVSIACQAEGFPIPTVTWKQSIGDTPGDYRELGYSGTEGAGVAGNGSLVISRVSRDHA 954
Query: 56 GIYSCTATNVHGMDESKG-RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA 114
G Y C A+N G SK RL V GP + + ++ ++ LRC A + LD++
Sbjct: 955 GFYLCQASNGIGPGLSKLIRLTVHAGPQVSVKTRQE-SVRRGESVTLRCEAEGDAPLDLS 1013
Query: 115 YIWTHNGVRIG-NMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKIST 170
W R+ N D+ N + G + L IT A+ D G+Y CV + G
Sbjct: 1014 --WRARDSRVDPNYDV-RYTIDNQKVSGRVISELRITQANHIDRGDYMCVATNAYGHARA 1070
Query: 171 KTTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKIIARTNWNST 224
++V+ PP P + V E S + W+ D A PIT+Y I+
Sbjct: 1071 SIKLLVQEPPNFPRNLHVAEQGSRSLLLAWSSPSSEQDPAHASSPITNY-IVQYKEAQDV 1129
Query: 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
W EH K V G ++ + L P ++Y F+V+A N LG PS T
Sbjct: 1130 WH---EHNTQKMV---AGDNTVALVSPLKPATSYHFRVLAENHLGTSAPSDIL-HAQTDG 1182
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKE 342
+ P P + + ++W+P R N + Y I ND +
Sbjct: 1183 EIPGGPPRHVIAEPLGPQQVKVTWQPPDRSLWNGELLGYTISCTNLGGNDQLVNITRVGI 1242
Query: 343 YGN-VGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
GN G R+ YT+Y V V+A N+ G GP S+ V++ + ED+P PQ V
Sbjct: 1243 TGNGDGTYDYRLTGLRKYTQYSVVVKAFNNKGDGPGSDPVSVQTLEDVPSAPPQTVACAA 1302
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV-GLQ 460
I VTW P + + G + G+++ Y E ++ + + ++ GL
Sbjct: 1303 LTGQNIQVTWKPPP--SDKVHGVVQGYKLLYEAASAVLEQQAGRETKISHALSTVLHGLS 1360
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVS 518
P T Y V+V+AY AGEG S T P P +K + N V ++W +
Sbjct: 1361 PYTNYTVQVLAYTRAGEGVTSSPVSCTTEETVPDAPE---RVKAVISNEDAVVISW--LP 1415
Query: 519 PSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
P + Y V V +DQ L + L + Y V A + G
Sbjct: 1416 PRRPNGILTKYTVYVRVLDQGQEVKITKNSLSEQNLHYEATGLKLRESYEAWVTASTKMG 1475
Query: 579 DGRMSSPAITFQM 591
G S+P I Q+
Sbjct: 1476 QG-PSTPVIKLQL 1487
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 20/186 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G + C+ P+ W KDG + +GGR + + + V+R+D G+Y C +
Sbjct: 358 GKAAHLTCSASGFPQTALYWLKDGQPLRTGGRIRAVSRERISVMAVAREDRGMYQCFVRS 417
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKI-------TIAAHRNLQLRCSAHTEELLDVAYIW 117
+ M + L + ++ P++ T+ ++ L+CSA ++ W
Sbjct: 418 EYEMAQGIAELRL-------GEIAPQLVYRFIEQTMQTGPSVSLKCSAAGNPTPQIS--W 468
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFA---DAGEYECVVKSTVGKISTKTTV 174
+G + D L + + G ++ N S D GEYEC+ S G+ S +
Sbjct: 469 LLDGFPLPQND-RLLIGQYVTVYGDVISHVNISSVKSEDGGEYECIASSRAGEASHSAKL 527
Query: 175 IVEGPP 180
+ G P
Sbjct: 528 NIYGLP 533
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 33/310 (10%)
Query: 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF 384
+ WR+ D + Q ++ + G+ +R + Y V+ N +G E+V
Sbjct: 1524 VEWRR-GDIKLQQKS--DIGSDNTLTLRNVQRTHEGNYSCHVK--NPLG---SDEIVYTL 1575
Query: 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--WKEDNPEETA 442
+ P P + + G + A+ + W + I+G L+ +R +Y W+E
Sbjct: 1576 QVQVPP--TPPTLIATGTTTDAVQLQWKQGDNGGAPIKGFLLAYRREYSEWEE------- 1626
Query: 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
L R N L+ GL+ TKY + A+N G G S+ +T P PP+ +
Sbjct: 1627 -VMLDRKA-NTHLLEGLECGTKYQFTLAAFNRIGSGSASKIETAKTNGTKP-IPPTKHQL 1683
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562
N T +T S P++ + + D ++++ P IV L
Sbjct: 1684 IKSNQT--FITLELTSWQDGGCPLLYFVAEYRRLPGDWLLVSNSVPPQSR---FPIVGLQ 1738
Query: 563 PGKRYHMRVLAFSNGGDGRMS------SPAITFQMGEEKEFKSGSPALYSASTTLLLVMS 616
G +Y +RV A++N G + SP + +M +E ++ +L+ + L +
Sbjct: 1739 SGTKYELRVTAYNNAGSTQAEYLFNTLSPTGSNRMHDEHPPETEETSLFFDAHVLAPTVI 1798
Query: 617 STLYIFVAFS 626
S L IF+A +
Sbjct: 1799 SFLAIFLAVA 1808
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRD-DSGIYSC 60
A G I C P VW+KDG + + R+++ NG+L I+ V R D G Y+C
Sbjct: 543 AVAGKQFHIKCPVAGYPIESIVWEKDGVRLPTNMRQRV-ANGSLFINTVQRAADQGTYTC 601
Query: 61 TATNVHGMDESKG---RLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEEL---L 111
TA N H + R++V PPKIT A N+ R S + L
Sbjct: 602 TARNKHNFTSQRSVEVRVLV----------PPKITPFSFARDLNVGHRTSVQCVVVTGDL 651
Query: 112 DVAYIWTHNGVRIGNMDLNELETPN 136
+ + W + V I + ++ +TP+
Sbjct: 652 PLTFTWLKDNVPIETIRTSQ-DTPS 675
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 39 IFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN 98
+ +G+L+I V D+G Y C+A+N G + + RL V S + Q P T+ +
Sbjct: 302 VVRDGSLIIQGVQESDAGSYMCSASNSEGSESMEVRLTVSAPLSVHVQ-PSIQTVDLGKA 360
Query: 99 LQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156
L CSA A W +G +R G + + I++ E D G
Sbjct: 361 AHLTCSA--SGFPQTALYWLKDGQPLRTGGR-IRAVSRERISVMAVARE-------DRGM 410
Query: 157 YECVVKS 163
Y+C V+S
Sbjct: 411 YQCFVRS 417
>gi|324499463|gb|ADY39770.1| Protein sidekick [Ascaris suum]
Length = 2193
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 169/619 (27%), Positives = 258/619 (41%), Gaps = 59/619 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++C E P P W+ +G+ + + G+ I + +L I V+ DSG YSC A+N
Sbjct: 423 GDEAMLWCGAEGNPLPSIAWRHNGSQLFTSGKYAI-DGRSLRIFSVNPSDSGEYSCIASN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYI-WTHNGV 122
+G D + L V+ G E P +I N+ + C A D + W NG+
Sbjct: 482 ENGNDRASAFLSVI-GSDLIEYGPSNQSILIGSNIMMPCKVADKYRSSDGVFASWKWNGI 540
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + + + IN DG L I + G Y C ++ + S + + P +
Sbjct: 541 AIP-LTGDAVRRFVINADGSL-SIKQVGPDNIGLYTCTIRVGTNEQSISAWLRIIEKPSM 598
Query: 183 PGGVQVVEVHKT---SATIQWTDGATNGRPITHYKIIART--------NWNSTWFNV-SE 230
P V V +++T + W +G P+ + + RT +W S NV SE
Sbjct: 599 PQSVYVELLNETIPARVRVSWREGFDGNSPLIKHIVQMRTIGPTGLWSDWESVVDNVPSE 658
Query: 231 HVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQA 290
VD L P ST EF+V+A N G G+PS S P P A
Sbjct: 659 LCCSTLVDN------------LKPSSTVEFRVVAVNRHGAGKPSLSSNNVTMPQQPPAAA 706
Query: 291 PSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAV 350
P + + + W+P P E+ N + Y I +R N + S E
Sbjct: 707 PRNVAASARSWSSIMVQWQPPPSEQWNGDILGYIIRYRLAN---YASLPWLEKNVSNGHA 763
Query: 351 VRIPSEFYYT--EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
P E T EYE++V A ND G G S+ + + + E +P AP V NSTAI
Sbjct: 764 RNAPLEHLITWREYEIQVAAYNDRGMGVFSKPLYVTTLEGVPTQAPLDVKVNIINSTAIA 823
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT---RNWALIVG-LQPDTK 464
V++ P + ++ I G G++++ WK + T +Y R +N ++VG L+
Sbjct: 824 VSFAPPD--QQMIPGVNQGYKVELWKGE-VTATNLYRQVRVLPDEQNITVVVGDLEKFGH 880
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y V V+ + + G+GP S T+ P S V+ + + V W PS
Sbjct: 881 YNVTVLCFTSPGDGPRSAPVEAVTFEDLPGAVES-VNFDTVLSNSAIVMWN--PPSEPNG 937
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPV-GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
II Y +R WE D AN + V +T I +L RY + V A++ G G
Sbjct: 938 RIIKYIIRFWE---DSHPANKKTLEVTSDTQSVTISELKASTRYTVDVQAWTKVGAG--- 991
Query: 584 SPAITFQMGEEKEFKSGSP 602
+ E F+SG P
Sbjct: 992 -------LRTEGRFESGVP 1003
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 182/420 (43%), Gaps = 38/420 (9%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG P + V ++ +A +Q+ G +G + I+ +S+ F V ++ +
Sbjct: 1007 PGRPSSLVVSDIGARNAVLQFVPG-FDGHTLIRKWIVEAKVASSSIFVVIFNISAPKARS 1065
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
+T +E L P++ Y+ ++IA N G G PS PS ++ T +P AP ++
Sbjct: 1066 FT------VEG-LRPYTKYQLRLIAENVRGRGAPSEPSREFETKQAEPEIAPEKLFAEPR 1118
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWR---KKNDTEFQSETLKEYGNVGIAVVRIPSE 356
+SISW PL + N Y I +R K+ +E ++ +KE + +
Sbjct: 1119 SSTSISISWAPLHPTQWNGEPRGYVILFRSNSKEQWSEMRTSNIKESDFI------VSDL 1172
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T YE+ + A N +G S+ V+ + ED+P AP + + V+W+PIE
Sbjct: 1173 QPFTNYEISLMAENSLGRSELSQKVSAMTYEDVPSGAPSNIQATVDAHRRALVSWDPIEE 1232
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIV------GLQPDTKYYVKVM 470
N G ++G++++ E EE +RT V L T Y V V
Sbjct: 1233 RLAN--GVILGYKVRVVPE---EERMRAQFTRTADTGDASVLKTTFSQLPAFTAYRVFVA 1287
Query: 471 AYNNAGEGPESER-YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
AY G GPE+ L +T P + PS V ++ + V + W + P ++ Y
Sbjct: 1288 AYTVVGRGPENTAPPLLQTGEDTPGE-PSGVAFSYVSESEVRLKW--MPPLNPNGRVLNY 1344
Query: 530 KVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+V W+ + QD A ++P N L P RY V A ++ G G + A+
Sbjct: 1345 EVTYWKPGMKQD---ALKILLPF-NVFGFSATGLQPESRYLFGVSAENSIGWGPQAVAAV 1400
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 162/397 (40%), Gaps = 46/397 (11%)
Query: 194 TSATIQWTD---GATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS-IE 249
TS +I W NG P Y I+ R+N W + R + KE+ I
Sbjct: 1121 TSISISWAPLHPTQWNGEP-RGYVILFRSNSKEQWSEM----------RTSNIKESDFIV 1169
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ L P++ YE ++A N LG E S T D P APS I +SW+
Sbjct: 1170 SDLQPFTNYEISLMAENSLGRSELSQKVSAM-TYEDVPSGAPSNIQATVDAHRRALVSWD 1228
Query: 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV------RIPSEFYYTEYE 363
P+ N + YK+ R + E + G A V ++P+ +T Y
Sbjct: 1229 PIEERLANGVILGYKV--RVVPEEERMRAQFTRTADTGDASVLKTTFSQLPA---FTAYR 1283
Query: 364 VKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
V V A VG GPE+ + + ED P P GV + + + + W P N
Sbjct: 1284 VFVAAYTVVGRGPENTAPPLLQTGEDTPG-EPSGVAFSYVSESEVRLKWMP----PLNPN 1338
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR++ + + YWK ++ L ++ GLQP+++Y V A N+ G GP++
Sbjct: 1339 GRVLNYEVTYWKPGMKQDALKILLPFNVFGFS-ATGLQPESRYLFGVSAENSIGWGPQAV 1397
Query: 483 RYLERTYRKAPQKPPSAVHIKGI---NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
+ T ++AP P A G +P + +TW + + EE I + ++ +
Sbjct: 1398 AAVVTTLQRAPPPLPPAPRRNGARAQSPNEISLTWTHPTLPPGEENISPVRF----INVE 1453
Query: 540 MSRANDTIIPVGNTL-----DADIVDLSPGKRYHMRV 571
A+ IP+ N + + I L P Y R+
Sbjct: 1454 YQAADSEWIPLANIVPGTVDEVTIAGLRPNTAYRARI 1490
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDTEFQSETLKEYG 344
P P + + L + W R + N+ + Y+I +R N+T E
Sbjct: 1515 PSSPPHSVQASPFESSALLLQWASPNRSEWNSDTVGYRILYRPYPSNETPSTEELTSTKN 1574
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
++ + + Y V++Q N+ G S V ++ +P+ + + +S
Sbjct: 1575 DLPKMQHIVRKLLSFRHYIVQMQTFNEQGSSEPSAPVFVYVGYSIPKRKVNSLVAEPLSS 1634
Query: 405 TAINVTWNP-IELIRENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALI 456
T+I V W+P +EL + I G +I+Y E++ EET V N I
Sbjct: 1635 TSIAVRWDPWVELPDDVISG----FKIRYTPVLPVLASEESLEETIV-----GENNSVNI 1685
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPES 481
V L+ T+Y V V AYN AGEG S
Sbjct: 1686 VELRKYTEYQVSVSAYNRAGEGEAS 1710
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++T+ C P+P W DG +G + L I+ + ++ G+Y C A N
Sbjct: 330 GESLTVHCTANGIPQPLLRWYFDGKPLGGNLSK-------LTIASLDNENFGVYQCEAHN 382
Query: 65 VHGMD-----ESKGRLIVLHGPSYYE----QLPPKITIAAHRNLQLRCSAHTEELLDVAY 115
G D +K + P + + P ++ + L C A L +A
Sbjct: 383 EAGADIAAIWVTKIYERAVDDPQSFAATITEKPKNTSVNSGDEAMLWCGAEGNPLPSIA- 441
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
W HNG ++ + IDG L I + + +D+GEY C+ + G
Sbjct: 442 -WRHNGSQL-------FTSGKYAIDGRSLRIFSVNPSDSGEYSCIASNENG 484
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 31/316 (9%)
Query: 176 VEGPPGLP-GGVQVVEVHKTSATIQWTDGATN--GRPITHYKIIARTNWNSTWFNVSEHV 232
+E PP P VQ ++ +QW + Y+I+ R + S +E +
Sbjct: 1511 LEAPPSSPPHSVQASPFESSALLLQWASPNRSEWNSDTVGYRILYRP-YPSNETPSTEEL 1569
Query: 233 IGKEVD----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ D ++ RK S + +V T+ NE G EPS+P Y P
Sbjct: 1570 TSTKNDLPKMQHIVRKLLSFRHYIVQMQTF-------NEQGSSEPSAPVFVY-VGYSIPK 1621
Query: 289 QAPSRIGGGGGKIGDLSISWEP---LPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYG 344
+ + + +++ W+P LP + + I Y E ET+ E
Sbjct: 1622 RKVNSLVAEPLSSTSIAVRWDPWVELPDDVISGFKIRYTPVLPVLASEESLEETIVGENN 1681
Query: 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNS 404
+V I +R YTEY+V V A N G G E+ V + + ED P + FS
Sbjct: 1682 SVNIVELR-----KYTEYQVSVSAYNRAGEG-EASAVRVKTMEDRPGTVGRLTFSDILLD 1735
Query: 405 TAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464
+ +NV+W P + I+ ++ ++ +E+ +E +TT + ++ L +
Sbjct: 1736 S-VNVSWTPPDEPNGIIQAYIVNYKTYNLREEFKKEIQ----EKTTSTYLVVNNLDENVT 1790
Query: 465 YYVKVMAYNNAGEGPE 480
Y+ V A AG G E
Sbjct: 1791 YFFSVRAETLAGYGDE 1806
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,276,395,770
Number of Sequences: 23463169
Number of extensions: 538392535
Number of successful extensions: 1361943
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 11717
Number of HSP's that attempted gapping in prelim test: 1178719
Number of HSP's gapped (non-prelim): 103449
length of query: 626
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 477
effective length of database: 8,863,183,186
effective search space: 4227738379722
effective search space used: 4227738379722
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)