BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12061
(626 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VN14|CONT_DROME Contactin OS=Drosophila melanogaster GN=Cont PE=1 SV=2
Length = 1390
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/593 (61%), Positives = 445/593 (75%), Gaps = 4/593 (0%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA GN TI C+PEAAP+PKF WKKDG +IGSGG R+I +G L ISP SRDD GIY+C
Sbjct: 768 YAVYNGNTTIVCDPEAAPRPKFQWKKDGQVIGSGGHRRILPSGTLTISPTSRDDEGIYTC 827
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A+N G DES R+IVL + E P +I H + L C A +ELLD+AY+W HN
Sbjct: 828 IASNQAGTDESHARVIVLQEIRFIETPPQRIVSKEHDLIFLHCEAAFDELLDIAYVWKHN 887
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
G + N N T I +D L + N S DAG+YECVVKS V +IS+KT+V +EG P
Sbjct: 888 GEVLKN---NHDGTGRIIVDWNRLTVHNTSMRDAGDYECVVKSAVNEISSKTSVSIEGAP 944
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGVQV+++ KT A I+W DG+ NGR I +Y I+ RTNWN TW NVS HV +EVDRY
Sbjct: 945 GAPGGVQVIQISKTKAIIEWVDGSHNGRAIRYYNILGRTNWNRTWVNVSTHVQAREVDRY 1004
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
T R++A + N L PWS YEF V A N+LG G PS+PSP Y+T DKPY AP +GGGGGK
Sbjct: 1005 TSRQQAEVVN-LTPWSAYEFSVTAVNDLGIGTPSAPSPIYSTYEDKPYIAPRNVGGGGGK 1063
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
IGDL+I+W+PL ++Q++ I+YK+FW+ K E+ S+ +K+ ++G+AVV IP YYT
Sbjct: 1064 IGDLTITWDPLLPQEQHSHGIHYKVFWKLKGAIEWASDEIKKQDHMGVAVVNIPLNNYYT 1123
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
EYEVKVQAIN VG GPESE+ I SAEDMPQVAPQ + +NST NVTW PI++ REN
Sbjct: 1124 EYEVKVQAINSVGKGPESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMSREN 1183
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
IRG+LIGHR+KYWK + EE +VYYLSRTTRNWALIVGLQPDT Y+VKVMAYN AGEGPE
Sbjct: 1184 IRGKLIGHRLKYWKTTHQEEDSVYYLSRTTRNWALIVGLQPDTYYFVKVMAYNAAGEGPE 1243
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SER+ ERTYRKAPQKPPS+VH+ GINP+TV V WRYVSPS +EEP+ GYKVR+WE DQ+M
Sbjct: 1244 SERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQDEEPVEGYKVRIWESDQNM 1303
Query: 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
AN+TI+P+G L++ I +L+PGK Y+MRVLA+SNGGDGRMSSP + FQMG+
Sbjct: 1304 ITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLHFQMGK 1356
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 255 WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314
++ YE KV A N +G G P S ++ D P AP + +++W+P+
Sbjct: 1122 YTEYEVKVQAINSVGKG-PESEIAVIHSAEDMPQVAPQKPIALAYNSTCFNVTWQPIDMS 1180
Query: 315 KQNAPNI-------YYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367
++N Y+K ++++ + S T + N + V P +Y+ VKV
Sbjct: 1181 RENIRGKLIGHRLKYWKTTHQEEDSVYYLSRTTR---NWALIVGLQPDTYYF----VKVM 1233
Query: 368 AINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
A N G GPESE + PQ P V G N + + V W + ++ + G
Sbjct: 1234 AYNAAGEGPESERFEERTYRKAPQKPPSSVHVYGINPSTVRVVWRYVSPSQD--EEPVEG 1291
Query: 428 HRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++++ W+ D TA + + + I L P Y ++V+AY+N G+G S L
Sbjct: 1292 YKVRIWESDQNMITANNTIVPIGQKLESYINNLTPGKSYNMRVLAYSNGGDGRMSSPTLH 1351
Query: 487 RTYRKAPQKPPSAVHIKGIN 506
K + + H IN
Sbjct: 1352 FQMGKTTRNGANTRHGHNIN 1371
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 9 TIFCNP-EAAPKPKFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
+IFC+P + P ++ W +D N + R + +G L S + D YSCT V
Sbjct: 486 SIFCDPPQHYPDVRYYWARDYFPNFVEEDQRVFVSRDGALYFSFIETVDRANYSCT---V 542
Query: 66 HGMDESKGR------LIVLHGPSY--------YEQLPPKITIAAHRNLQLRCSAHTEELL 111
+ GR L V +Y + ++ P+ +A ++L C A +
Sbjct: 543 QTLVSDTGRNGPFFPLRVTPNSNYQALIFANTFPKVFPEAPVAGDE-IRLECMAFGYPI- 600
Query: 112 DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161
+Y WT G+ + + IN G +L I NA+ D GEY C +
Sbjct: 601 -PSYNWTRQGLPL------QRNAYTINY-GRVLIIQNATTNDNGEYSCTI 642
>sp|Q8IWV2|CNTN4_HUMAN Contactin-4 OS=Homo sapiens GN=CNTN4 PE=1 SV=1
Length = 1026
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 297/622 (47%), Gaps = 30/622 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+PKP + WKK +I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G L+V P+ P + + ++ L C + LD+ + W+ NG I
Sbjct: 482 HFGTASSTGNLVV-KDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V ++S +IV GPPG P
Sbjct: 541 DFDRDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + +D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELID---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLAS-ADASRYVFRNESVHPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELIRENIR 422
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W +P+ E R
Sbjct: 775 VKVGVFNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPL----EKNR 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR+ G+ +KYW+ ++ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 831 GRIQGYEVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSA 890
Query: 483 RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 891 TVNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTS 949
Query: 542 --RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEK 595
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 950 VIETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNAYARGS 1000
Query: 596 EFKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1001 GASTSNACTLSAISTIMISLTA 1022
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
+G V + C P P +W++ DG I RR NG L I ++D+G+Y C
Sbjct: 238 AKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGLYECV 296
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + ++G+L P++ +++ I +A N+ C A+ Y W NG
Sbjct: 297 AENSRGKNVARGQLTFYAQPNWIQKI-NDIHVAMEENVFWECKANGRP--KPTYKWLKNG 353
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
+ D I I+ G L IT + +DAG Y+C+ ++ G I + + +VI GP
Sbjct: 354 EPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGP 406
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G + +G R + E L+ +P D+G Y CT
Sbjct: 42 EEKKVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCT 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
>sp|Q62845|CNTN4_RAT Contactin-4 OS=Rattus norvegicus GN=Cntn4 PE=1 SV=1
Length = 1026
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 196/621 (31%), Positives = 296/621 (47%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G ++V P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVVV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W VS + + VD G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVS--TVPELVD---GK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 775 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ + Y++ V AYN+AG GP S
Sbjct: 832 RIQGYEVKYWRHDDKEENARKIRTVGNQTSTKITNLKGNALYHLSVKAYNSAGTGPSSAA 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 892 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 950
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 951 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 1001
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1002 ASTSNACTLSAISTIMISLTA 1022
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 147/605 (24%), Positives = 244/605 (40%), Gaps = 83/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ +
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRERIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIYA 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + +DAG Y C+ + G S+ V+V+ P + P +
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSM 507
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNSTWFNV 228
QV H WT NG I H++ + +S +
Sbjct: 508 DVTVGESIVLPCQVTHDHSLDIVFTWT---FNGHLIDFDKDGDHFERVG--GQDSAGDLM 562
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ K +Y + S++ K+ A +L P P P D+
Sbjct: 563 IRNIQLKHAGKYVCMVQTSVD-----------KLSAAADLIVRGP--PGPPEAVTIDEIT 609
Query: 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVG 347
++ +SW P P ++P Y I R +Q+ T+ E +
Sbjct: 610 DTTAQ------------LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVSTVPELVDGK 655
Query: 348 IAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + EYE + A N +G G P + E +P+V P V G + +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 407 INVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWALIVGLQ 460
+ +TW E + E ++ GR G+ + + P ++ L+ +R ++
Sbjct: 716 LVITW---ETVPEELQNGRGFGYVVAF----RPHGKMIWMLTVLASADASRYVFRNESVR 768
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV +NN GEGP S L + + P KPP+++ + ++ T + V W SP
Sbjct: 769 PFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPI 826
Query: 521 FEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ I GY+V+ W D A I VGN I +L YH+ V A+++ G
Sbjct: 827 GKNRGRIQGYEVKYWRHDDKEENARK-IRTVGNQTSTKITNLKGNALYHLSVKAYNSAGT 885
Query: 580 GRMSS 584
G S+
Sbjct: 886 GPSSA 890
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + E L+ +P DSG Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDSGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ E L A+I+
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGE-LSYAWIFN 160
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ N ET N L I AD G Y CVV +TV T+ V G
Sbjct: 161 EHPSYQDNRRFVSQETGN-------LYIAKVEKADVGNYTCVVTNTV------TSHQVLG 207
Query: 179 PP 180
PP
Sbjct: 208 PP 209
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKADVGNYTCVVTNTVTSHQVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGSTVKLECFALGNPVPTI--LWRRADGKPIARKARRHKSS-------GILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K V P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNIAKGQVTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>sp|Q69Z26|CNTN4_MOUSE Contactin-4 OS=Mus musculus GN=Cntn4 PE=2 SV=2
Length = 1026
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 291/621 (46%), Gaps = 28/621 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG V I C P+A+P+P + W+K I+ R I E+GNL I V++ D+G Y+C ATN
Sbjct: 422 GGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSYTCIATN 481
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S G +IV P+ P + + ++ L C + LD+ + WT NG I
Sbjct: 482 HFGTASSTGNVIV-KDPTKVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGHLI 540
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
+ D + E G L I N AG+Y C+V+++V K+S +IV GPPG P
Sbjct: 541 DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDKLSVAADLIVRGPPGPP 600
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V + E+ T+A + W G N PIT Y I ART ++ W + D G+
Sbjct: 601 EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGW-----QAVNTVPDLVDGK 655
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+ +A N +G GEPS PS + T P P+ + GGGG +
Sbjct: 656 TFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSE 715
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WE +P E QN Y + +R + L + V R S ++ +E
Sbjct: 716 LVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLAS-ADASRYVFRNESVRPFSPFE 774
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S ++SAE+ P P +F+R ++T I V W I +N RG
Sbjct: 775 VKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASPIGKN-RG 831
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R+ G+ +KYW+ D+ EE A + + I L+ Y++ V AYN+AG GP S
Sbjct: 832 RIQGYEVKYWRHDDKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAGTGPSSAT 891
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-WEVDQDMS- 541
T + P +PP + I + + + + W V E + GYKV W S
Sbjct: 892 VNVTTRKPPPSQPPGNI-IWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSV 950
Query: 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS----PAITFQMGEEKE 596
N T + + D D Y + + FS+GGDG S P I+
Sbjct: 951 IETNKTSVELSLPFDED---------YIIEIKPFSDGGDGSSSEQIRIPKISNSYARGSG 1001
Query: 597 FKSGSPALYSASTTLLLVMSS 617
+ + SA +T+++ +++
Sbjct: 1002 ASTSNACTLSAISTIMISLTA 1022
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 243/606 (40%), Gaps = 85/606 (14%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + + R +I E G L I+ V+ D+G+Y C A N HG+ S
Sbjct: 337 CKANGRPKPTYRWLKNGDPLLTRDRIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFS 395
Query: 72 KGRL-IVLHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L ++ P + L ++T + + + C Y W R G L
Sbjct: 396 SAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASP--RPVYTW-----RKGREIL 448
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL---PGGV 186
E E I+ DG L I N + +DAG Y C+ + G S+ VIV+ P + P +
Sbjct: 449 RENERITISEDGN-LRIINVTKSDAGSYTCIATNHFGTASSTGNVIVKDPTKVMVPPSSM 507
Query: 187 ------------QVVEVHKTSATIQWTDGATNGRPI------THYKIIARTNWNSTWFNV 228
QV H WT NG I H++ + +S +
Sbjct: 508 DVTVGESIVLPCQVTHDHSLDIVFTWT---FNGHLIDFDKDGDHFERVG--GQDSAGDLM 562
Query: 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP-QYNTPADKP 287
++ K +Y + S++ + V A + + G P P + D
Sbjct: 563 IRNIQLKHAGKYVCMVQTSVDKLSV----------AADLIVRGPPGPPEAVTIDEITDTT 612
Query: 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNV 346
Q +SW P P ++P Y I R +Q+ T+ + +
Sbjct: 613 AQ----------------LSWRPGP--DNHSPITMYVIQARTPFSVGWQAVNTVPDLVDG 654
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ + EYE + A N +G G P + E +P+V P V G + +
Sbjct: 655 KTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKS 714
Query: 406 AINVTWNPIELIRENIR-GRLIGHRIKYWKEDNPEETAVYYLS-----RTTRNWALIVGL 459
+ +TW E + E ++ GR G+ + + P ++ L+ +R +
Sbjct: 715 ELVITW---ETVPEELQNGRGFGYVVAF----RPHGKMIWMLTVLASADASRYVFRNESV 767
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
+P + + VKV +NN GEGP S L + + P KPP+++ + ++ T + V W SP
Sbjct: 768 RPFSPFEVKVGVFNNKGEGPFSPTTLVYSAEEEPTKPPASIFARSLSATDIEVFW--ASP 825
Query: 520 SFEEE-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG 578
+ I GY+V+ W D D I VGN I +L YH+ V A+++ G
Sbjct: 826 IGKNRGRIQGYEVKYWRHD-DKEENAKKIRTVGNQTSTKITNLKGSALYHLSVKAYNSAG 884
Query: 579 DGRMSS 584
G S+
Sbjct: 885 TGPSSA 890
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P +W++ DG I RR NG L I ++D+G Y C
Sbjct: 237 AEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK-SNGILEIPNFQQEDAGSYEC 295
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +KG+L P++ Q+ I +A ++ C A+ Y W N
Sbjct: 296 VAENSRGKNVAKGQLTFYAQPNWV-QIINDIHVAMEESVFWECKANGRP--KPTYRWLKN 352
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G + D I I+ G L IT + +DAG Y+CV ++ G I S + +VI E
Sbjct: 353 GDPLLTRD-------RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIAES 405
Query: 179 P 179
P
Sbjct: 406 P 406
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 33/189 (17%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V + C + PKP WK +G IG R + + L+ +P D+G Y C
Sbjct: 42 EEKKVKLSCEVKGNPKPHIRWKINGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCI 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ + +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPN-------INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171
N E P+ ++ + G L I +D G Y CVV +TV
Sbjct: 159 FN------------EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV------ 200
Query: 172 TTVIVEGPP 180
T V GPP
Sbjct: 201 TNHKVLGPP 209
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 41 ENGNLLISPVSRDDSGIYSCTATNVHGMDESKG--RLIVLHGPSYYEQLPPKI------T 92
E GNL I+ V + D G Y+C TN + G ++L + PKI T
Sbjct: 175 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234
Query: 93 IAAHR--NLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNINIDGGLLEITNA 149
+ A + ++L C A + + +W +G I + G+LEI N
Sbjct: 235 VPAEKGTTVKLECFALGNPVPTI--LWRRADGKPIA-------RKARRHKSNGILEIPNF 285
Query: 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV-EVHKTSATIQWTDGATNGR 208
DAG YECV +++ GK K + P VQ++ ++H + + NGR
Sbjct: 286 QQEDAGSYECVAENSRGKNVAKGQLTFYAQPNW---VQIINDIHVAMEESVFWECKANGR 342
Query: 209 PITHYK 214
P Y+
Sbjct: 343 PKPTYR 348
>sp|Q62682|CNTN3_RAT Contactin-3 OS=Rattus norvegicus GN=Cntn3 PE=1 SV=1
Length = 1028
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 285/580 (49%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R + +G L I V++ D+GIY+C A N
Sbjct: 424 GSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCIAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTQLVVTE-PTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGTLT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W NV + + +D T R
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQNV--RTVPEAIDGKT-R 658
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+E L PW YEF+V+A N++G GEPS PS + T P APS + GGGG +
Sbjct: 659 TATVVE--LNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
RL+G+ ++YW EE++ + A++ GL+ + YY V AYN AG GP S
Sbjct: 834 RLLGYEVRYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L I+ ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTIANLNVSDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK----ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
L VL + + P K + + + L + SA L W + G+
Sbjct: 398 SAELKVLASAPDFSRNPMKKMIQVQVGSLVILDCKPSASPRAL----SFW-----KKGDT 448
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 449 VVREQARISLLNDGG-LKIMNVTKADAGIYTCIAENQFGKANGTTQLVVTEP 499
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKF-NGVLEIPNFQQEDTGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + A +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWVQLLKDVETAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L I N + +D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ ++++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKSRMRSRVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-------WEVDQDMSRANDTII 548
PP V + I TT ++W + S P+I Y V+ W+ + + A D
Sbjct: 600 PPENVKVDEITDTTAQLSWTEGTDS--HSPVISYAVQARTPFSVGWQNVRTVPEAID--- 654
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
G T A +V+L+P Y RV+A + G G S P+
Sbjct: 655 --GKTRTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
>sp|P97528|CNTN6_RAT Contactin-6 OS=Rattus norvegicus GN=Cntn6 PE=1 SV=1
Length = 1028
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 300/627 (47%), Gaps = 36/627 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVIGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WEP+P E QN Y I +R T + E + + + R S +
Sbjct: 715 SELVITWEPIPEELQNGEGFGYIIMFRPVGSTTWMKEKVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED P++AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVSIVYSGEDEPRLAPRGTSVQSFSASDMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K N + + + W +V E ++GYK+ +
Sbjct: 888 GPSSPPVNVTTKKSPPSQPPANIAWKLSN-SKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKR-YHMRVLAFSNGGDGRMSSPAITFQMGEEKE 596
Q + +T N A++ L P + Y + + S+GGDG S ++ +
Sbjct: 947 QSKTHVLET-----NNTSAEL--LVPFEEDYLIEIRTVSDGGDGSSSE---EIRIPKMSS 996
Query: 597 FKSGSPALYSASTTLLLVMSSTLYIFV 623
S + ST L M Y FV
Sbjct: 997 LSSVGVQILKPSTQ-FLTMVGFFYCFV 1022
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R + ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGERLNTEERIQT-ENGTLIITMLNVSDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y CV + G + ++IV+
Sbjct: 451 KQSKRV-FFLEDGSLKICNVTRSDAGSYTCVATNQFGNGKSSGSLIVK 497
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A + +V + C P P W++ G + L I ++D G Y C
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQEDEGFYECV 298
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W NG
Sbjct: 299 AGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLKNG 355
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
R+ + I + G L IT + +D+G Y+C ++
Sbjct: 356 ERLNTEE-------RIQTENGTLIITMLNVSDSGIYQCAAEN 390
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
+ + C P P + WK++G +I S + G+L IS P + D GIY C ATN
Sbjct: 46 IILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGEL---SYDWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ + G L I +D G Y C V + S V+GPP
Sbjct: 162 --NPLYVQEDKRRFVSQNTGNLYIAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIFEN-GNLLISPVSRDDS 55
EG V + C P P F W + N + RR + +N GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + + + LEI D G YECV +
Sbjct: 252 LGNPVPDISWRRLDGSPMPGKVKYSNSQ--------ATLEIPKFQQEDEGFYECVAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>sp|Q07409|CNTN3_MOUSE Contactin-3 OS=Mus musculus GN=Cntn3 PE=2 SV=2
Length = 1028
Score = 271 bits (694), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 184/580 (31%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V + C P A+P+ WKK ++ R +G L I V++ D+G Y+CTA N
Sbjct: 424 GSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + +A ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALT 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + WT+G + P+ Y + ART ++ W +V + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSV--RTVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+++A N++G GEPS PS + T P APS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + + N V R S ++ YE
Sbjct: 717 LVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRY-VFRNESIVPFSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP + + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ + A++ GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+
Sbjct: 894 VNATTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A+++ L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELL-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G V + C P P+ W++ DG + + + F NG L I ++D+G Y C
Sbjct: 239 AAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKF-NGMLEIQNFQQEDTGSYEC 297
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + ++GRL P Y+ QL + IA +L C A + +Y W N
Sbjct: 298 IAENSRGKNVARGRLTYYAKP-YWLQLLRDVEIAVEDSLYWECRASGKP--KPSYRWLKN 354
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178
G D LE I I+ G L ITN + D+G ++C+ ++ G I S + V+
Sbjct: 355 G------DALVLEE-RIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASA 407
Query: 179 P 179
P
Sbjct: 408 P 408
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G+ + R +I ENG L I+ ++ DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGDALVLEERIQI-ENGALTITNLNVTDSGMFQCIAENKHGLIYS 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L V+ + + P K + + W + G+M + E
Sbjct: 398 SAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFW-----KKGDMMVRE 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ DGG L+I N + ADAG Y C ++ GK + T ++V P
Sbjct: 453 QARVSFLNDGG-LKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEP 499
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRD-DSGIYSCT 61
E +T+ C P P + W+ +G +I S R GNL++ +R+ D+G Y C
Sbjct: 42 EDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I +D G Y CVV STV
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTV 202
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV---WEVDQDMSRANDTIIPVGN 552
PP V + I TT ++W + S P+I Y V+ + V R +I G
Sbjct: 600 PPENVKVDEITDTTAQLSWTEGTDS--HSPVISYAVQARTPFSVGWQSVRTVPEVID-GK 656
Query: 553 TLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T A +V+L+P Y R++A + G G S P+
Sbjct: 657 THTATVVELNPWVEYEFRIVASNKIGGGEPSLPS 690
>sp|P97527|CNTN5_RAT Contactin-5 OS=Rattus norvegicus GN=Cntn5 PE=1 SV=1
Length = 1099
Score = 271 bits (694), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 287/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + R I +G+L I S+ D G Y C N+ G
Sbjct: 499 VLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E + V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASVSVKE-PTRIELTPKRTELTVGESIVLNCKAMHDSSLDVTFYWTLKGQPIDFE 617
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E+ L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 618 KEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 677
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 678 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 732
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + GG G+ +L I
Sbjct: 733 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGGSGRRHELVI 792
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + + R S T +EVKV
Sbjct: 793 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPFEVKV 851
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 852 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 907
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++A +R ++ ++ GL+ DT Y++ V AYN AG GP S
Sbjct: 908 GFEIGYWKDTEPEDSAETVRTRGNESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREVSA 967
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P +PP + + + V + W V P E ++GYKV + + +T
Sbjct: 968 TTKRHPPSEPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIET 1026
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 1027 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYAGGKITSAQSTLHS 1079
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 1080 LSKWSSVTLLLAL 1092
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQIYTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 428 APL-------LPQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 480
Query: 181 GL 182
Sbjct: 481 SF 482
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 411 CKATGKPRPTYRWLKNGAPLLPQSRVDT-ANGVLAIHSVNQSDAGMYQCLAENKYGAIYA 469
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ VR GN +
Sbjct: 470 SAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVR-GNKRI 528
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L P+ G L I NAS AD G+Y C + G +V V+ P
Sbjct: 529 AIL--PD-----GSLRILNASKADEGKYICQGVNIFGSAEIIASVSVKEP 571
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 119 VALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 275
>sp|Q9UQ52|CNTN6_HUMAN Contactin-6 OS=Homo sapiens GN=CNTN6 PE=1 SV=1
Length = 1028
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 282/585 (48%), Gaps = 28/585 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG++ I C P A P+ WK+ + R + E+G+L I ++R D+G Y+C ATN
Sbjct: 424 GGDIVIGCKPNAFPRAAISWKRGTETLRQSKRIFLLEDGSLKIYNITRSDAGSYTCIATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ G LIV + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGTAKNTGSLIVKER-TVITVPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWFFNGDVI 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ +S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLHHSGKYLCTVQTTLESLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P VQV ++ T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVQVEDISSTTSQLSWRAGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y I +R T + E + + V R S +
Sbjct: 715 SELVITWESIPEELQNGEGFGYIIMFRPVGSTTWSKEKVSSVESSRF-VYRNESIIPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL---SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
GR++G+ + YW +D+ E + TT+N I GL+ +T Y+ V AYN AG G
Sbjct: 833 -GRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKN---ITGLKANTIYFASVRAYNTAGTG 888
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
P S T + P +PP+ + K N + + + W +V E ++GYK+ + Q
Sbjct: 889 PSSPPVNVTTKKSPPSQPPANIAWKLTN-SKLCLNWEHVKTMENESEVLGYKILYRQNRQ 947
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+ I+ NT +V + Y + + S+GGDG S
Sbjct: 948 SKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSS 986
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 17/236 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ EYE +V A N +G G SE + + +P VAP + G + + + +TW I
Sbjct: 668 WVEYEFRVVAGNSIGIGEPSEPSELLRTKASVPVVAPVNIHGGGGSRSELVITWESIPEE 727
Query: 418 RENIRGRLIGHRIKY-------WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470
+N G G+ I + W ++ + ++V RN ++I P + + VKV
Sbjct: 728 LQN--GEGFGYIIMFRPVGSTTWSKE--KVSSVESSRFVYRNESII----PLSPFEVKVG 779
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
YNN GEG S + + PQ P ++ + + + V+W ++ + ++GY+
Sbjct: 780 VYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSLQSFSASEMEVSWNAIAWNRNTGRVLGYE 839
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
V W D S + GN +I L Y V A++ G G S P
Sbjct: 840 VLYWTDDSKESMIGKIRVS-GNVTTKNITGLKANTIYFASVRAYNTAGTGPSSPPV 894
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYS 59
A + +V + C P P W++ DG+ + G+ K ++ +L P ++D G Y
Sbjct: 239 AAKDSSVKLECFALGNPVPDISWRRLDGSPLP--GKVKYSKSQAILEIPNFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A+N+ G + +KG+LI + P +EQ ++ + NL C A + + Y W
Sbjct: 297 CIASNLRGRNLAKGQLI-FYAPPEWEQKIQNTHLSIYDNLLWECKASGKP--NPWYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R LN E I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGER-----LNPEE--RIQIENGTLIITMLNVSDSGVYQCAAEN 390
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 7/166 (4%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + R +I ENG L+I+ ++ DSG+Y C A N + + +
Sbjct: 339 CKASGKPNPWYTWLKNGERLNPEERIQI-ENGTLIITMLNVSDSGVYQCAAENKYQIIYA 397
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L VL + + P K + A W G L +
Sbjct: 398 NAELRVLASAPDFSKSPVKKKSFVQVGGDIVIGCKPNAFPRAAISWKR-----GTETLRQ 452
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+ + ++ G L+I N + +DAG Y C+ + G ++IV+
Sbjct: 453 SKRIFL-LEDGSLKIYNITRSDAGSYTCIATNQFGTAKNTGSLIVK 497
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATNV 65
V + C P P + WK++G +I + + G+L I SP + D G+Y C ATN+
Sbjct: 46 VILNCAANGYPSPHYRWKQNGTDIDFTMSYHYRLDGGSLAINSPHTDQDIGMYQCLATNL 105
Query: 66 HGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G S K +L + + + +++ + + L C D++Y WT N
Sbjct: 106 LGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGP-PPHFGDLSYAWTFND--- 161
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E ++ + G L I +D G Y C + + + S V+GPP
Sbjct: 162 NPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFITNKEAQRS------VQGPP 211
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWKKDGN--IIGSGGRRKIF-ENGNLLISPVSRDDS 55
EG V + C P P F W + N + RR + E GNL I+ V D
Sbjct: 136 EGQGVVLLC----GPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G L + P + P I A +++L C A
Sbjct: 192 GNYTCFITNKEAQRSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI N D G YEC+ +
Sbjct: 252 LGNPVPDISWRRLDGSPLPGKVKYSKSQ--------AILEIPNFQQEDEGFYECIASNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
Score = 36.2 bits (82), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI--I 548
+ P PP V ++ I+ TT ++WR P PI + ++ +A T+ I
Sbjct: 595 RGPPGPPEDVQVEDISSTTSQLSWR-AGPD-NNSPIQIFTIQTRTPFSVGWQAVATVPEI 652
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
G T +A +V LSP Y RV+A ++ G G S P+
Sbjct: 653 LNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSEPS 690
>sp|Q90W79|CNTN5_CHICK Contactin-5 OS=Gallus gallus GN=CNTN5 PE=1 SV=1
Length = 1027
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 283/586 (48%), Gaps = 22/586 (3%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G V I C P+A+PKP WKK + R I G+L I S+ D G YSC
Sbjct: 422 KGQEVVIECKPQASPKPTITWKKGDKALRESKRVTILPQGSLRILNASKSDEGRYSCRGV 481
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
NV G E + V P+ E P KI + ++ L C A + LDV + WT NG
Sbjct: 482 NVFGSAEIVASVSVKE-PTRIELTPKKIELTVGESIVLSCKALHDSTLDVTFYWTLNGQP 540
Query: 124 IG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
I + + E+ L I N AG Y C V++ +S +T ++V GPPG
Sbjct: 541 IDFDKEDGHFESIKAQASSADLMIRNILLMHAGRYGCRVQTAADAVSDETELLVRGPPGP 600
Query: 183 PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
PG V V E+ T+AT+ W+ GA N PI+ Y + AR+ ++ W + D +G
Sbjct: 601 PGVVIVEEITDTTATLSWSPGADNHSPISLYNLQARSPFSLGW-----QTVKTVPDVISG 655
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E+++ L PW YEF+V+A N++G G+PS+PS T P P+ + G G+
Sbjct: 656 DMESAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPPANVSGRSGRRH 715
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
+L I+WEP+ E QN Y + +R N T E + + + R S T +
Sbjct: 716 ELVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSDASKFIYRDESVPPLTPF 774
Query: 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIR 422
EVKV N+ G GP S +V I SAE P AP V + + + I V W + I+E++
Sbjct: 775 EVKVGVYNNKGDGPFSPIVVICSAEGEPTAAPIDVKATSLSVSEILVAW---KHIKESL- 830
Query: 423 GRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482
GR G I YWK+ EE A + + L+ GL+ +T Y++ V AYN AG GP S
Sbjct: 831 GRPQGFEIGYWKDMEQEEAAEKVKTAGNESSLLLTGLEGNTLYHLTVRAYNAAGYGPPST 890
Query: 483 RYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS 541
T + P + PS V I+ + + V + W V P E ++GYKV + + Q
Sbjct: 891 AVRVATKKSPPSQAPSNVMWIQ--DGSHVSLGWEPVRPLANESEVMGYKVLLRQEGQ--- 945
Query: 542 RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+N +I T + +V L Y + V A S GGDG +SP I
Sbjct: 946 -SNSQVIETQKT--SAVVILPDVGVYIIEVCAVSEGGDG-TASPQI 987
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 14/184 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C P P WKK +G+ RK L I V +D+G+Y C
Sbjct: 239 AARGTTVKMECFALGNPVPTISWKKVNGHNPSKARLRK--SQAVLEIPNVQLEDAGMYEC 296
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G + +G+L V P + E+L + + L+ C A + Y W N
Sbjct: 297 KAENSRGRNVFRGQLQVYTYPQWVEKL-NDTELDSGEQLRWECKATGKP--RPTYRWLKN 353
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGP 179
GV + I + +L I + +DAG Y+C+ ++ G I + I+
Sbjct: 354 GVPLWPQS-------RIEMINSVLMIRTVNISDAGMYQCLAENKYGTIYASAELKILASA 406
Query: 180 PGLP 183
P P
Sbjct: 407 PTFP 410
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCT 61
E V++ C +P P + W ++G I S R + E ++ +P DSG Y C
Sbjct: 42 EEKKVSLNCQAHGSPTPTYRWLRNGTEIDVESDYRYSLIEGSLIISNPNEMKDSGQYQCL 101
Query: 62 ATNVHGMDESKGRLIVL-HGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
TN+ G S+ ++ + ++ + +++ + + L CS H+ E++ Y W
Sbjct: 102 TTNMFGSILSREAVLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPLHSPEII---YSWV 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 159 FNEF---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 202
>sp|Q9JMB8|CNTN6_MOUSE Contactin-6 OS=Mus musculus GN=Cntn6 PE=2 SV=2
Length = 1028
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 297/625 (47%), Gaps = 34/625 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+++I C P A PK WK+ + R E+G+L I V+R D+G Y+C ATN
Sbjct: 424 GGDISIECKPNAFPKASISWKRGTENLKQSKRVLFLEDGSLKICNVTRADAGSYTCVATN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G +S G L+V + P K+ + ++ L C + ++V ++W NG I
Sbjct: 484 QFGNGKSSGGLVVKER-TIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGDII 542
Query: 125 GNMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
DL + I G G L I N +G+Y C V++T+ ++S +IV GPPG
Sbjct: 543 ---DLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPG 599
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
P V+V + T++ + W G N PI + I RT ++ W + +
Sbjct: 600 PPEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGW-----QAVATVPEILN 654
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
G+ + L PW YEF+V+AGN +G GEPS PS T A P AP I GGGG
Sbjct: 655 GQTYNATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSR 714
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L I+WE +P E QN Y + +R T + E + + + R S +
Sbjct: 715 SELVITWEAIPEELQNGEGFGYIVMFRPVGTTAWMKERVALVESSKF-IYRNESIMPLSP 773
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
+EVKV N+ G G S V ++S ED PQ+AP+G + F+++ + V+WN I R
Sbjct: 774 FEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNT- 832
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477
GR++G+ + YW DN +E+ + + + TT+N I GL+ +T Y+ V AYN AG
Sbjct: 833 -GRVLGYEVLYWT-DNSKESMIGKIRVSGNVTTKN---ITGLRANTIYFASVRAYNTAGT 887
Query: 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
GP S T + P +PP+ + K ++ + + + W +V E ++GYK+ +
Sbjct: 888 GPSSLPVNVTTKKSPPSQPPANIAWK-LSNSKLCLNWEHVKTMENESEVLGYKILYRQNR 946
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
Q + I+ NT +V + Y + + S+GGDG S +M
Sbjct: 947 QSKTH----ILETNNTSAELLVPFE--EDYLIEIRTVSDGGDGSSSEEIRIPKMSS---- 996
Query: 598 KSGSPALYSASTTLLLVMSSTLYIF 622
S + S +T L M Y F
Sbjct: 997 LSSTGVQISKPSTQSLSMVGVFYCF 1021
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 133/605 (21%), Positives = 234/605 (38%), Gaps = 81/605 (13%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P + W K+G + + R +I ENG L+I+ ++ DSGIY C A N + +
Sbjct: 339 CKASGNPNPSYTWLKNGQRLNTEERIQI-ENGTLIITMLNISDSGIYQCAAENKYQTIYA 397
Query: 72 KGRLIVL-HGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L VL P + + KI++ ++ + C + +++ + G +L
Sbjct: 398 NAELRVLASAPDFSKNPIKKISVVQVGGDISIECKPNAFPKASISW-------KRGTENL 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVV-------KSTVGKISTKTTVIVEGPPGL 182
+ + + ++ G L+I N + ADAG Y CV KS+ G + + T+I P +
Sbjct: 451 KQSKRV-LFLEDGSLKICNVTRADAGSYTCVATNQFGNGKSSGGLVVKERTIITVPPSKM 509
Query: 183 PGGV--------QVVEVHKTSATIQW---TDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
V QV W D + + H++ I +V +
Sbjct: 510 DVTVGESIVLPCQVSHDPTMEVLFVWYFNGDIIDLKKGVAHFERIGGE-------SVGDL 562
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+I ++G+ +++ L S ++ G P P + +
Sbjct: 563 MIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRG---------PPGPPEDVKVEHISSTT 613
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQS-ETLKEYGNVGIAV 350
S++ SW P P N+P + I R +Q+ T+ E N
Sbjct: 614 SQL------------SWRPGP--DNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYN 659
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAE-DMPQVAPQGVFSRGFNSTAINV 409
+ + EYE +V A N++G G S+ + + +P VAP + G + + + +
Sbjct: 660 ATVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVI 719
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT---------RNWALIVGLQ 460
TW I +N G G+ + + P T + R RN +++
Sbjct: 720 TWEAIPEELQN--GEGFGYIVMF----RPVGTTAWMKERVALVESSKFIYRNESIM---- 769
Query: 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520
P + + VKV YNN GEG S + + PQ P ++ + + + V+W ++ +
Sbjct: 770 PLSPFEVKVGVYNNEGEGSLSTVTIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWN 829
Query: 521 FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY+V W D I GN +I L Y V A++ G G
Sbjct: 830 RNTGRVLGYEVLYW-TDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTG 888
Query: 581 RMSSP 585
S P
Sbjct: 889 PSSLP 893
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
A + ++ + C P P WK+ DG+ + G+ K ++ +L I ++D G Y
Sbjct: 239 AAKDSSIKLECFALGNPVPDISWKRLDGSPMP--GKIKYSKSQAILEIPKFQQEDEGFYE 296
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N+ G + +KG+LI + P +EQ ++ + +L C A + +Y W
Sbjct: 297 CIAGNLRGRNLAKGQLI-FYAPPEWEQKIQNTYLSIYDSLFWECKASGNP--NPSYTWLK 353
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
NG R+ + I I+ G L IT + +D+G Y+C ++
Sbjct: 354 NGQRLNTEE-------RIQIENGTLIITMLNISDSGIYQCAAEN 390
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLIS-PVSRDDSGIYSCTATN- 64
+ + C P P + WK++G I G + G+L IS P + D GIY C ATN
Sbjct: 46 IILTCTANGYPSPHYRWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNP 105
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
V + K +L + + + +++ + + L C H EL +Y WT N
Sbjct: 106 VGTILSRKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPPHFGEL---SYAWTFND- 161
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + E + ++ D G L +D G Y C V + S V+GPP
Sbjct: 162 --SPLYVQEDKRRFVSQDTGNLYFAKVEPSDVGNYTCFVTNKEAHRS------VQGPP 211
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 72/195 (36%), Gaps = 30/195 (15%)
Query: 4 EGGNVTIFCNPEAAPKPKF-----VWK-KDGNIIGSGGRRKIF--ENGNLLISPVSRDDS 55
EG V + C P P F W D + +R+ + GNL + V D
Sbjct: 136 EGQGVVLLC----GPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGNLYFAKVEPSDV 191
Query: 56 GIYSCTATNVHGMDESKG--RLIVL--------HGPSYYEQLPPKITIAAHRNLQLRCSA 105
G Y+C TN +G +VL + P + P I A +++L C A
Sbjct: 192 GNYTCFVTNKEAHRSVQGPPTPLVLRTDGVMGEYEPKIEVRFPETIQAAKDSSIKLECFA 251
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ D+++ G + ++ + +LEI D G YEC+ +
Sbjct: 252 LGNPVPDISWKRLDGSPMPGKIKYSKSQ--------AILEIPKFQQEDEGFYECIAGNLR 303
Query: 166 GKISTKTTVIVEGPP 180
G+ K +I PP
Sbjct: 304 GRNLAKGQLIFYAPP 318
>sp|Q9P232|CNTN3_HUMAN Contactin-3 OS=Homo sapiens GN=CNTN3 PE=1 SV=3
Length = 1028
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 281/580 (48%), Gaps = 18/580 (3%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G V++ C P A+P+ WKK + R + +G L I+ V++ D+G Y+C A N
Sbjct: 424 GSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAEN 483
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G L+V P+ P + ++ ++ L C + LLD+ + W NG
Sbjct: 484 QFGKANGTTHLVVTE-PTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALA 542
Query: 125 G-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D + E + G L+ I N +G+Y C+V++ V +S+ +IV G PG P
Sbjct: 543 DFKKDGSHFEKVGGSSSGDLM-IRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPP 601
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
V+V E+ T+A + W +G N P+ Y I ART ++ W V+ + + +D G+
Sbjct: 602 ENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVT--TVPEVID---GK 656
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
+ L PW YEF+V+A N++G GEPS PS + T P PS + GGGG +
Sbjct: 657 THTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSE 716
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+W+P+P E QN Y + +R T + +T+ + V R S Y+ YE
Sbjct: 717 LVITWDPVPEELQNGEGFGYVVAFRPLGVTTW-IQTVVTSPDTPRYVFRNESIVPYSPYE 775
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S V T+FSAE+ P VAP V + +S+ I V+WN I N G
Sbjct: 776 VKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSN--G 833
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
L+G+ ++YW EE++ A + GL+ + YY V AYN+AG GP S
Sbjct: 834 HLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSAT 893
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P +PP V + T V + W V E + GYKV Q+ +
Sbjct: 894 VNVTTKKTPPSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQV 952
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
+T N A++V L + Y + V A ++GGDG S
Sbjct: 953 LNT-----NKTSAELV-LPIKEDYIIEVKATTDGGDGTSS 986
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C PKP + W K+G + R +I ENG L IS +S DSG++ C A N HG+ S
Sbjct: 339 CRASGKPKPSYRWLKNGAALVLEERTQI-ENGALTISNLSVTDSGMFQCIAENKHGLVYS 397
Query: 72 KGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L V+ + + P K + + + L C ++ + G++ +
Sbjct: 398 SAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSW-------KKGDVSV 450
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
E E ++ DGG L+I N + ADAG Y C+ ++ GK + T ++V P
Sbjct: 451 QEHERISLLNDGG-LKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEP 499
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNL-LISPVSRDDSGIYSCT 61
E +T+ C P P + W+ +G+ I S R GNL +I+P D+G Y C
Sbjct: 42 EDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCF 101
Query: 62 ATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWT 118
ATN G S+ +L + ++ ++ +++ + + L C H+ EL +Y W
Sbjct: 102 ATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGEL---SYAWI 158
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
N + E ++ + G L I+ +D G Y CVV S V
Sbjct: 159 FNEYP---SFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMV 202
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 22/178 (12%)
Query: 4 EGGNVTIFCNP---EAAPKPKFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P +++ + + + RR + E G+L IS V D G Y+
Sbjct: 136 EGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYT 195
Query: 60 CTATNVHGMDESKGRLIVL----------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T++ G L + P Q P + A ++L C A
Sbjct: 196 CVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNP 255
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167
+ + + + + L + G+LEI N DAG YEC+ +++ GK
Sbjct: 256 IPQINWRRSDGLPFSSKIKLRKF--------SGVLEIPNFQQEDAGSYECIAENSRGK 305
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV-------WEVDQDMSRANDTII 548
PP V + I TT ++W+ P+I Y ++ W+ + D
Sbjct: 600 PPENVKVDEITDTTAQLSWK--EGKDNHSPVISYSIQARTPFSVGWQTVTTVPEVID--- 654
Query: 549 PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
G T A +V+L+P Y RV+A + G G S P+
Sbjct: 655 --GKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPS 690
>sp|P68500|CNTN5_MOUSE Contactin-5 OS=Mus musculus GN=Cntn5 PE=1 SV=2
Length = 1098
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 285/613 (46%), Gaps = 24/613 (3%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP W+K + + R I +G+L I S+ D G Y C N+ G
Sbjct: 498 VLIECEPQGSPKPAISWRKGDKAVRANKRIAILPDGSLRILNASKADEGKYICQGVNIFG 557
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG-N 126
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 558 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFE 616
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186
+ E L I N AG Y C V++T +S + ++V GPPG PG V
Sbjct: 617 KEGGHFENIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPPGVV 676
Query: 187 QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246
V E+ +++AT+ W+ N PI+ Y + AR+ ++ W + + TG E+
Sbjct: 677 IVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGW-----QTVKTVPEVITGDMES 731
Query: 247 SIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306
++ L PW YEF+V+A N +G G+PS PS T P APS + G G+ +L I
Sbjct: 732 AMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRRHELVI 791
Query: 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366
+WEP+ E QN Y + +R N T E + + R S T +EVKV
Sbjct: 792 AWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFEVKV 850
Query: 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLI 426
N+ G GP S++V I SAE P AP V + + + I V W + ++E++ GR
Sbjct: 851 GVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVW---KHVKESL-GRPQ 906
Query: 427 GHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
G I YWK+ PE++ +R ++ ++ GL+ +T Y++ V AYN AG GP S
Sbjct: 907 GFEISYWKDTEPEDSVETVRTRGNESFVMLTGLEGNTLYHLTVRAYNGAGYGPPSREAST 966
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T R P++PP + + + V + W V P E ++GYKV + + +T
Sbjct: 967 TTKRHPPREPPGNLRWEQ-QGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSEGQVIET 1025
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS 606
P +V L Y + V A+S GGDG SS I + S L+S
Sbjct: 1026 QKPQA------VVPLPEAGVYIIEVRAYSEGGDGTASS-QIRVPSYSGGKITSAQSTLHS 1078
Query: 607 ----ASTTLLLVM 615
+S TLLL +
Sbjct: 1079 LSKWSSVTLLLAL 1091
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I + DD+GIY CT
Sbjct: 311 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRK-SQAVLEIPNLQLDDAGIYECT 369
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L + P + ++L + + LQ C A + Y W NG
Sbjct: 370 AENSRGKNSFRGQLQIFTYPHWVQKL-NDTQLDSGSPLQWECKATGKP--RPTYRWLKNG 426
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPP 180
+ L ++ G+L I + + +DAG Y+C+ ++ G I + I+ PP
Sbjct: 427 APL-------LPQSRVDTVNGILAIQSVNQSDAGMYQCLAENKYGAIYASAELKILASPP 479
Query: 181 GL 182
Sbjct: 480 SF 481
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W K+G + R NG L I V++ D+G+Y C A N +G +
Sbjct: 410 CKATGKPRPTYRWLKNGAPLLPQSRVDTV-NGILAIQSVNQSDAGMYQCLAENKYGAIYA 468
Query: 72 KGRLIVLHGPSYYE--QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129
L +L P +E Q+ I + R + + C +++ R G+ +
Sbjct: 469 SAELKILASPPSFELNQVKKSIIVTKDRGVLIECEPQGSPKPAISW-------RKGDKAV 521
Query: 130 NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I DG L I NAS AD G+Y C + G ++ V+ P
Sbjct: 522 RANKRIAILPDGS-LRILNASKADEGKYICQGVNIFGSAEIIASLSVKEP 570
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG+Y C ATN
Sbjct: 118 VALNCEVRGNPSPSYRWLRNGTEIALESDYRYSLIDGTFIISNPSELRDSGLYQCLATNS 177
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 178 FGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 234
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+ V
Sbjct: 235 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNAV 274
>sp|O94779|CNTN5_HUMAN Contactin-5 OS=Homo sapiens GN=CNTN5 PE=2 SV=2
Length = 1100
Score = 263 bits (672), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 275/581 (47%), Gaps = 25/581 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
V I C P+ +PKP WKK + R I +G+L I S+ D G Y C NV G
Sbjct: 499 VVIECKPQGSPKPTISWKKGDRAVRENKRIAILPDGSLRILNASKSDEGKYVCRGENVFG 558
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
E L V P+ E P + + ++ L C A + LDV + WT G I
Sbjct: 559 SAEIIASLSVKE-PTRIELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPI--- 614
Query: 128 DLNE----LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
D E E+ L I N AG Y C V++T +S + ++V GPPG P
Sbjct: 615 DFEEEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVSDEAELLVRGPPGPP 674
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGR 243
G V V E+ +++AT+ W+ A N PI+ Y + AR+ ++ W + + TG
Sbjct: 675 GIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGW-----QTVKTVPEIITGD 729
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
E+++ L PW YEF+V+A N +G G+PS+PS T P AP+ + G G+ +
Sbjct: 730 MESAMAVDLNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNVSGRSGRRHE 789
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYE 363
L I+WEP+ E QN Y + +R N T E + + R S T +E
Sbjct: 790 LVIAWEPVSEEFQNGEGFGYIVAFR-PNGTRGWKEKMVTSSEASKFIYRDESVPPLTPFE 848
Query: 364 VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423
VKV N+ G GP S++V I SAE P AP V + + + I V W + I+E++ G
Sbjct: 849 VKVGVYNNKGDGPFSQIVVICSAEGEPSAAPTDVKATSVSVSEILVAW---KHIKESL-G 904
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483
R G + YWK+ E+TA +R ++ ++ GL+ +T Y+ V AYN AG GP S
Sbjct: 905 RPQGFEVGYWKDMEQEDTAETVKTRGNESFVILTGLEGNTLYHFTVRAYNGAGYGPPSSE 964
Query: 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543
T + P + PS + + + V + W V P E ++GYKV + S+
Sbjct: 965 VSATTKKSPPSQAPSNLRWEQ-QGSQVSLGWEPVIPLANESEVVGYKVFYRQEGHSNSQV 1023
Query: 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+T L A +V L Y + V A+S GGDG SS
Sbjct: 1024 IET-----QKLQA-VVPLPDAGVYIIEVRAYSEGGDGTASS 1058
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +G V + C P P W K I S R + L I V DD+GIY C
Sbjct: 312 AAKGTTVKMECFALGNPVPTITWMKVNGYIPSKARLRK-SQAVLEIPNVQLDDAGIYECR 370
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + +G+L V P + E+L + + L+ C A + Y W NG
Sbjct: 371 AENSRGKNSFRGQLQVYTYPHWVEKL-NDTQLDSGSPLRWECKATGKP--RPTYRWLKNG 427
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGP 179
V + E+ +N G+L I N + +DAG Y+C+ ++ G I S + ++ P
Sbjct: 428 VPLSPQSRVEM----VN---GVLMIHNVNQSDAGMYQCLAENKYGAIYASAELKILASAP 480
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V + C P P + W ++G I S R + + ++ +P DSG Y C ATN
Sbjct: 119 VALNCEVRGNPVPSYRWLRNGTEIDLESDYRYSLIDGTFIISNPSEAKDSGHYQCLATNT 178
Query: 66 HGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA--HTEELLDVAYIWTHNGV 122
G S+ L + ++ + +++ + + L CS H+ E++ Y W N
Sbjct: 179 VGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEII---YSWVFNEF 235
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
+ E I+ + G L I+ +D G Y C+VK+TV
Sbjct: 236 ---PSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVKNTV 275
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
H D K V +GP + ++ P I T + + + L C + +Y W NG
Sbjct: 84 HSSDAFKQDESVDYGPVFVQE-PDDIIFPTDSDEKKVALNCEVRGNPV--PSYRWLRNGT 140
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFA-DAGEYECVVKSTVGKISTKTTVI 175
I DL E + IDG + I+N S A D+G Y+C+ +TVG I ++ +
Sbjct: 141 EI---DL-ESDYRYSLIDGTFI-ISNPSEAKDSGHYQCLATNTVGSILSREATL 189
>sp|Q12860|CNTN1_HUMAN Contactin-1 OS=Homo sapiens GN=CNTN1 PE=1 SV=1
Length = 1018
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 295/592 (49%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG+
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGRGEPSIPSNRIKTDGAAPNVAPSDVGGGGGR 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMSPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHW---EHVLEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + EE A + A + L PDT+Y+++V A N+AG GP
Sbjct: 836 I---VESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMIEAFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPIPERTTKPYPADIVVQFKD 250
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENTYGAI 400
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENTYGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITDP 504
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 25/221 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + + C+P ++ N I RR + + NGNL I+ V D G Y
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNY 209
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEE 109
SC ++ + I L P I +N+ L C A
Sbjct: 210 SCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNP 269
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ D+ R + T I+ G +L+I N D G YEC ++ GK
Sbjct: 270 VPDI---------RWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDK 320
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
+ + V+ P + EV + + W AT G+PI
Sbjct: 321 HQARIYVQAFPEWVEHINDTEV-DIGSDLYWPCVAT-GKPI 359
>sp|P12960|CNTN1_MOUSE Contactin-1 OS=Mus musculus GN=Cntn1 PE=1 SV=1
Length = 1020
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 303/594 (51%), Gaps = 33/594 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITHIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S V I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
+ D + + I V D + Y + V A S+GGDG +S I
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKI 994
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+G+Y C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGVYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCIATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGY---------------SYHKGELRLYDVTFENAGMYQCIAENAYGSI 400
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CIATGKPIPTIRWLKNG---------YSYHKGELRLYDVTFENAGMYQCIAENAYGSIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 27/222 (12%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + + C+P ++ N I RR + + NGNL I+ V D G Y
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNY 209
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEE 109
SC ++ + I L P I +N+ L C A
Sbjct: 210 SCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNP 269
Query: 110 LLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ D+ + L + T I+ G +L+I N D G YEC ++ GK
Sbjct: 270 VPDIRW----------RKVLEPMPSTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKD 319
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
+ + V+ P + EV + + W AT G+PI
Sbjct: 320 KHQARIYVQAFPEWVEHINDTEV-DIGSDLYWPCIAT-GKPI 359
>sp|Q63198|CNTN1_RAT Contactin-1 OS=Rattus norvegicus GN=Cntn1 PE=1 SV=2
Length = 1021
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 304/595 (51%), Gaps = 33/595 (5%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K + + R I+E+G+L I+ ++R+D GIY+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L++ + P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 AENNRGKANSTGTLVITN-PTRIILAPINADITVGENATMQCAASFDPSLDLTFVWSFNG 544
Query: 122 VRIG-NMDLNELE-TPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I N ++ + N +D G L I NA AG Y C ++ V S ++V G
Sbjct: 545 YVIDFNKEITNIHYQRNFMLDANGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG 604
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238
PPG PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE-- 662
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
G E++ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGG
Sbjct: 663 ---GNMESAKAVDLIPWMEYEFRVVATNTLGTGEPSIPSNRIKTDGAAPNVAPSDVGGGG 719
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
G +L+I+W PL RE N Y + ++ + E++ T+ + G V + +
Sbjct: 720 GTNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMTP 778
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW-NPIELI 417
T ++VKV+A N+ G GP S + I SA+D P AP V + +S+ I+V W + +E I
Sbjct: 779 STAFQVKVKAFNNKGDGPYSLIAVINSAQDAPSEAPTEVGVKVLSSSEISVHWKHVLEKI 838
Query: 418 RENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW-ALIVGLQPDTKYYVKVMAYNNAG 476
E+ ++I+YW + +E A + + T++ + A + L PDT+Y+++V A N+AG
Sbjct: 839 VES-------YQIRYWAGHD-KEAAAHRVQVTSQEYSARLENLLPDTQYFIEVGACNSAG 890
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW-- 534
GP S+ +E RKAP P + + + +TW +V E + GYK+
Sbjct: 891 CGPSSD-VIETFTRKAPPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKILYRPD 949
Query: 535 -EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 950 GQHDGKLFSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 995
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + + R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDVDLTNDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEDRPEVKVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ MD ++ G L I N +D G Y C V S
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVESSDRGNYSCFVSS 215
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
Y G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YTMMGQNVTLECFALGNPVPDIRWRKVLEPMPTTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D G+Y C A N+ G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGLYECEAENIRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG G L + + +F +AG Y+C+ ++ G I
Sbjct: 363 R--WLKNGYAYHK---------------GELRLYDVTFENAGMYQCIAENAYGTI 400
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N +G +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YAYHKGELRLYDVTFENAGMYQCIAENAYGTIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + + W+ + N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + D G Y C ++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRNDGGIYTCFAENNRGKANSTGTLVITNP 504
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 81/222 (36%), Gaps = 27/222 (12%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + + C+P ++ N I RR + + NGNL I+ V D G Y
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVESSDRGNY 209
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEE 109
SC ++ + I L P I +N+ L C A
Sbjct: 210 SCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDIYTMMGQNVTLECFALGNP 269
Query: 110 LLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
+ D+ + L + T I+ G +L+I N D G YEC ++ GK
Sbjct: 270 VPDIRW----------RKVLEPMPTTAEISTSGAVLKIFNIQLEDEGLYECEAENIRGKD 319
Query: 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
+ + V+ P + EV + + W AT G+PI
Sbjct: 320 KHQARIYVQAFPEWVEHINDTEV-DIGSDLYWPCVAT-GKPI 359
>sp|Q28106|CNTN1_BOVIN Contactin-1 OS=Bos taurus GN=CNTN1 PE=2 SV=1
Length = 1018
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 290/592 (48%), Gaps = 29/592 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKP F+W K + + R I+E+G+L I+ ++R D G+Y+C
Sbjct: 426 AAKGGRVIIECKPKAAPKPTFLWSKGTERLVNSSRILIWEDGSLEINNITRSDGGVYTCF 485
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
N G S G L++ P+ P I N ++C+A + LD+ ++W+ NG
Sbjct: 486 VENNKGKANSTGTLVITD-PTRIILAPINADITVGENATMQCAASFDPALDLTFVWSFNG 544
Query: 122 VRIGNMDLNELETPNINIDG-GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I N N +D G L I NA AG Y C ++ V S ++V GPP
Sbjct: 545 YVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPP 604
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ ++ TS + W+ G+ N PI+ Y I +T + W + E
Sbjct: 605 GPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIE---- 660
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G EA+ L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 661 -GNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGS 719
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ + G V + + T
Sbjct: 720 NRELTITWAPLSREYHYFNNFGYIVAFKPFDGEEWKKVTVTN-PDTGRYVHKDETMRPST 778
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
++VKV+A N+ G GP S I SA+D P AP V + +S+ I+V W E + E
Sbjct: 779 AFQVKVKAFNNKGDGPYSLTAVIHSAQDAPSEAPTAVGVKVLSSSEISVHW---EHVVEK 835
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
I + ++I+YW + E A + A + L PDT+Y+V+V A N+AG GP
Sbjct: 836 I---VESYQIRYWASHDKEAAAHRVQVASQEYSARLENLLPDTQYFVEVRACNSAGCGPP 892
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVH-VTWRYVSPSFEEEPIIGYKVRVW---EV 536
S+ T + P +PP I + + + +TW +V E + GYKV +
Sbjct: 893 SDMTETFTKKAPPSQPPRI--ISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH 950
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
D + + I V D + Y + V A S+GGDG +S I+
Sbjct: 951 DGKLYSTHKHSIEVPIPRDGE---------YVVEVRAHSDGGDGVVSQVKIS 993
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
G V++ C A+P P + W+ + I R GNL+I +P + D+GIY C A+N
Sbjct: 59 GKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASN 118
Query: 65 VHGMDESKGRLIVLHGPSYYEQLP----PKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+GM S + Y + P P++ + + + L C D++Y W N
Sbjct: 119 NYGMVRSTEATLSF---GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN 175
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ MD ++ G L I N +D G Y C V S S +V +
Sbjct: 176 EFPVFITMDKRRF----VSQTNGNLYIANVEASDKGNYSCFVSSP----SITKSVFSKFI 227
Query: 180 PGLPGGVQVVEVHKTSATIQWTD 202
P +P + + + +Q+ D
Sbjct: 228 PLIPLPERTTKPYPADIVVQFKD 250
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G + G L + V+ +++G+Y C A N HG +
Sbjct: 352 CVATGKPIPTIRWLKNG---------YSYHRGELRLYDVTFENAGMYQCIAENTHGAIYA 402
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L +E P K I A + ++ + ++W+ R+ N
Sbjct: 403 NAELKILALAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPTFLWSKGTERLVN----- 457
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ I I + G LEI N + +D G Y C V++ GK ++ T+++ P
Sbjct: 458 --SSRILIWEDGSLEINNITRSDGGVYTCFVENNKGKANSTGTLVITDP 504
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 33/175 (18%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P W+K I SG KIF + +
Sbjct: 252 YALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN--------IQLE 303
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113
D GIY C A N G D+ + R+ V P + E + + +L C A + + +
Sbjct: 304 DEGIYECEAENNRGKDKHQARIYVQAFPEWVEHI-NDTEVDIGSDLYWPCVATGKPIPTI 362
Query: 114 AYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168
W NG + G L + + +F +AG Y+C+ ++T G I
Sbjct: 363 R--WLKNGY---------------SYHRGELRLYDVTFENAGMYQCIAENTHGAI 400
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 25/221 (11%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFE-NGNLLISPVSRDDSGIY 58
EG + + C+P ++ N I RR + + NGNL I+ V D G Y
Sbjct: 150 EGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNY 209
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH---------RNLQLRCSAHTEE 109
SC ++ + I L P I +N+ L C A
Sbjct: 210 SCFVSSPSITKSVFSKFIPLIPLPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNP 269
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ D+ R + T I+ G +L+I N D G YEC ++ GK
Sbjct: 270 VPDI---------RWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENNRGKDK 320
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPI 210
+ + V+ P + EV + + W AT G+PI
Sbjct: 321 HQARIYVQAFPEWVEHINDTEV-DIGSDLYWPCVAT-GKPI 359
>sp|Q7ZW34|CNTN5_DANRE Contactin-5 OS=Danio rerio GN=cntn5 PE=2 SV=1
Length = 1056
Score = 255 bits (652), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 188/593 (31%), Positives = 280/593 (47%), Gaps = 43/593 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +V++ C P A+PKP+ W+K+ + R + N L I SR D G Y C A N
Sbjct: 452 GKDVSLECRPRASPKPRISWRKNDRRLQPSRRIMLLRNNTLRIINSSRSDEGSYVCRAEN 511
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G E L+V P E P ++ + ++ L C + LDV+++W N
Sbjct: 512 QFGSAELTTVLLVKE-PMRVELSPLRVEVTVGESVVLSCKVTHDPSLDVSFLWLLN---- 566
Query: 125 GNMDLNELETPNINIDGGLLEI--TNASFAD----------AGEYECVVKSTVGKISTKT 172
N LN + DGG E T +S AD AG+Y C +++ + +
Sbjct: 567 -NQPLNTQQ------DGGHFEYIQTQSSTADLMIRSILLKHAGKYGCRAQTSTDSVLAEA 619
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
++V GPPG PG V V E+ ++AT+ W+ G N PIT Y + AR+ + W
Sbjct: 620 ELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTYNVQARSPVSLGW-----QT 674
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + D TG E+++ L PW YEF+V+A N +G G+PS PS T P AP+
Sbjct: 675 VKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSRAVRTKEAVPSVAPA 734
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
+ GG G+ +L ISWEP+ E QN Y + +R N T E + + R
Sbjct: 735 NVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFR-VNGTRGWKEKMVTSADSTTYKYR 793
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ T +EV+V N+ G GP SEVVT+FSAE P+ P V + +S+ I V W
Sbjct: 794 DETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQAFAVSSSEIKVLWK 853
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P GR G+ + +WK+ EE + L+ GL +T+Y V V +
Sbjct: 854 P----PSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNTQYLVSVKGF 909
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N+AG+GP S T + AP PP + I+ N V ++W V E +IGYKV
Sbjct: 910 NSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGN--NVSLSWDPVKARDNESEVIGYKV 967
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
+ + R + ++ N+ A ++ L G Y + V A S GG+G S+
Sbjct: 968 LL----RQEGRGHSQVMRTPNS--AVVLTLPEGGTYIIEVRAVSEGGEGAASA 1014
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P+P + W ++G + + R ++ NG L I + + DSG+Y C A N +G S
Sbjct: 369 CRATGKPRPTYRWLRNGEPLSTQSRVEMV-NGELTIHRLQQADSGMYQCIAENKYGAIYS 427
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L +L + P ++ +++ L C ++ W N R+
Sbjct: 428 SAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRIS--WRKNDRRLQPSRRIM 485
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
L + L I N+S +D G Y C ++ G T ++V+ P
Sbjct: 486 L------LRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEP 527
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 127/352 (36%), Gaps = 58/352 (16%)
Query: 4 EGGNVTIFCNPEA-APKPKFVW--KKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYS 59
EG V + C P + +P+ + W + + + RR I E GNL I V D G Y
Sbjct: 167 EGQGVVLMCAPPSHSPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYV 226
Query: 60 C----TATNVHGMDESKGRLIVLHG------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109
C T TN + + G P P + A ++L C A
Sbjct: 227 CQVKNTVTNARVLSPPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNP 286
Query: 110 LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169
+ + + M N + + +LEI N D+G YEC ++T G +
Sbjct: 287 VPTITW---------RKMSGNIPKKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTA 337
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ + V P + ++ + ++W AT G+P Y+ + ST V
Sbjct: 338 FRGHLQVYTLPQWISMINDTQLD-SGEQLRWECRAT-GKPRPTYRWLRNGEPLSTQSRVE 395
Query: 230 ----EHVIGKEVDRYTGRKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPA 284
E I + +G + EN +S+ E K++A +P +N
Sbjct: 396 MVNGELTIHRLQQADSGMYQCIAENKYGAIYSSAELKILAS-----------APMFN--- 441
Query: 285 DKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336
P R+ GK D+S+ P K +I WR KND Q
Sbjct: 442 ----NNPVRLIATVGK--DVSLECRPRASPKP-------RISWR-KNDRRLQ 479
>sp|P14781|CNTN1_CHICK Contactin-1 OS=Gallus gallus GN=CNTN1 PE=1 SV=1
Length = 1010
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 291/590 (49%), Gaps = 25/590 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A +GG V I C P+AAPKPKF W K ++ +G R I+++G+L I V++ D G Y+C
Sbjct: 417 AAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIHIWDDGSLEIINVTKLDEGRYTCF 476
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L + + P + + N ++C A + LD+ +IW+ NG
Sbjct: 477 AENNRGKANSTGVLEMTEA-TRITLAPLNVDVTVGENATMQCIASHDPTLDLTFIWSLNG 535
Query: 122 VRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I +E N+ I G L I N AG Y C ++ V S ++V GPP
Sbjct: 536 FVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYTCTAQTIVDNSSASADLVVRGPP 595
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGG+++ E+ T+ + W+ G N PI+ Y I ++T + W + E
Sbjct: 596 GPPGGIRIEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAK-----TEPSDI 650
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E++ L+PW YEF++IA N LG GEPS PS + T P APS +GGGGG
Sbjct: 651 EGNMESARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGS 710
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
+L+I+W PL RE N Y + ++ + E++ T+ +G V + S T
Sbjct: 711 NRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTN-PEIGRYVHKDESMPPST 769
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+Y+VKV+A N G GP S I+SA+D P P V + +S+ I+V+W+ +
Sbjct: 770 QYQVKVKAFNSKGDGPFSLTAVIYSAQDAPTEVPTDVSVKVLSSSEISVSWHHV------ 823
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G++I+YW + E A + L+P+T+Y++ V A+N+AG GP
Sbjct: 824 TEKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHIDVSAFNSAGYGPP 883
Query: 481 SERYLERTYRKAP--QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQ 538
S R ++ RKAP Q+P ++ + + +TW +V E + GYKV Q
Sbjct: 884 S-RTIDIITRKAPPSQRPRIISSVR--SGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQ 940
Query: 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ T +T++ V + Y + V A S GGDG ++ I+
Sbjct: 941 HEGKLFST---GKHTIE---VPVPSDGEYVVEVRAHSEGGDGEVAQIKIS 984
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 36/189 (19%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-------DGNIIGSGGRRKIFENGNLLISPVSRD 53
YA G NVT+ C P P+ W K I SG KIF + +
Sbjct: 243 YALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKIFN--------IQYE 294
Query: 54 DSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLD 112
D G+Y C A N G D+ + R+ V P + E + + I + +L C A + +
Sbjct: 295 DEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGS--DLYWPCVATGKPIPT 352
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
+ W NGV + G L I +F DAG Y+C+ ++ G I
Sbjct: 353 IR--WLKNGV---------------SFRKGELRIQGLTFEDAGMYQCIAENAHGIIYANA 395
Query: 173 TV-IVEGPP 180
+ IV PP
Sbjct: 396 ELKIVASPP 404
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 17/160 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71
C P P W K+G F G L I ++ +D+G+Y C A N HG+ +
Sbjct: 343 CVATGKPIPTIRWLKNG---------VSFRKGELRIQGLTFEDAGMYQCIAENAHGIIYA 393
Query: 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
L ++ P +E P K I A + ++ + + W+ + N
Sbjct: 394 NAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGS--- 450
Query: 132 LETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKIST 170
I+I D G LEI N + D G Y C ++ GK ++
Sbjct: 451 ----RIHIWDDGSLEIINVTKLDEGRYTCFAENNRGKANS 486
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 13/164 (7%)
Query: 6 GNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLIS-PVSRDDSGIYSCTATN 64
G V++ C A P P + WK + I R G L+IS P D+G Y C +N
Sbjct: 51 GQVSMNCRARAVPFPTYKWKLNNWDIDLTKDRYSMVGGRLVISNPEKSRDAGKYVCVVSN 110
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPP----KITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+ G S + Y + PP ++ + L C D++Y W N
Sbjct: 111 IFGTVRSSEATLSF---GYLDPFPPEEHYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLN 167
Query: 121 GVRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+ +D ++ G L I N +D G Y C V S
Sbjct: 168 EFPVFIALDRRRF----VSQTNGNLYIANVEASDKGNYSCFVSS 207
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 454 ALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
A ++ L P +Y +++A N G G P RT P PS V G + + +
Sbjct: 657 ARVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTI 716
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571
TW +S + GY V +++ R T +G + D + P +Y ++V
Sbjct: 717 TWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKD-ESMPPSTQYQVKV 775
Query: 572 LAFSNGGDGRMSSPAITF 589
AF++ GDG S A+ +
Sbjct: 776 KAFNSKGDGPFSLTAVIY 793
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 36 RRKIFE--NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPP---- 89
RR+ NGNL I+ V D G YSC ++ + I L + ++ P
Sbjct: 177 RRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQADRAKVYPADIK 236
Query: 90 ---KITIAAH-RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL-ETPNINIDGGLL 144
K T A +N+ L C A + ++ + + L + T I++ G +L
Sbjct: 237 VKFKDTYALLGQNVTLECFALGNPVPELRW----------SKYLEPMPATAEISMSGAVL 286
Query: 145 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+I N + D G YEC ++ GK + V V+ P
Sbjct: 287 KIFNIQYEDEGLYECEAENYKGKDKHQARVYVQASP 322
>sp|Q02246|CNTN2_HUMAN Contactin-2 OS=Homo sapiens GN=CNTN2 PE=1 SV=1
Length = 1040
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG + I C P AAPK +W K I+ + R + +G L+I +SR D G Y+C
Sbjct: 430 AARGGEILIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCF 489
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + WT +
Sbjct: 490 AENFMGKANSTG-ILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTWTLDD 548
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + N+ G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 549 FPIDFDKPGGHYRRTNVKETIGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPP 608
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART W V + E
Sbjct: 609 GPPGGVVVRDIGDTTIQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIE---- 664
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L PW YEF+VIA N LG GEPS PS + T P APS + GGGG
Sbjct: 665 -GNAETAQVLGLTPWMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGA 723
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L ++W P+ RE QN Y + +R++ T +Q+ + + V S YT
Sbjct: 724 PGELIVNWTPMSREYQNGDGFGYLLSFRRQGSTHWQTARVPG-ADAQYFVYSNESVRPYT 782
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NVTW P++ ++
Sbjct: 783 PFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQ---QD 839
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN AG GP
Sbjct: 840 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPA 899
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 900 SPSANATTMKPPPRRPPGNISWT-FSSSSLSIKWDPVVPFRNESAVTGYKM 949
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + V W P+
Sbjct: 678 WMDYEFRVIASNILGTGEPSGPSSKIRTREAAPSVAPSGLSGGGGAPGELIVNWTPMS-- 735
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ ++P T + VK+
Sbjct: 736 REYQNGDGFGYLLSFRRQGSTHWQTARVPGADAQYFVYSNE-------SVRPYTPFEVKI 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG++ + ++VTW V ++GY
Sbjct: 789 RSYNRRGDGPESLTALVYSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGI-LLGY 847
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L P +YH+ V A++ G G S A
Sbjct: 848 EIRYWKAG-DKEAAADRVRTAGLDTSARVSGLHPNTKYHVTVRAYNRAGTGPASPSA 903
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 250 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWTTAEPTLQIPSVSFEDEGTYEC 306
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 307 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPTVR--WLRN 363
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 364 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 414
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
V + C A+P + WK +G + G R GNL+I +P D+G+Y C A+N
Sbjct: 56 QVLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASN 115
Query: 65 VHGM---DESKGRLIVLHGPSYYEQLPPKITIAAHR--NLQLRCS--AHTEELLDVAYIW 117
G E+ R L S E+ P + AH + L C+ AH L +Y W
Sbjct: 116 PVGTVVSREAILRFGFLQEFSKEERDP----VKAHEGWGVMLPCNPPAHYPGL---SYRW 168
Query: 118 THNGVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKI 168
N E PN I DG G L I + +D G Y C+ S +
Sbjct: 169 LLN------------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DF 215
Query: 169 STKT 172
STK+
Sbjct: 216 STKS 219
>sp|P22063|CNTN2_RAT Contactin-2 OS=Rattus norvegicus GN=Cntn2 PE=1 SV=1
Length = 1040
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 271/538 (50%), Gaps = 26/538 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISILCQPRAAPKATILWSKGTEILGNSTRVTVTSDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + + G L I NA G+Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPIDFDKPGGHYRRASAKETIGDLTILNAHVRHGGKYTCMAQTVVDGTSKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE-------YGNVGIAVVRI 353
G+L I+W P+ RE QN Y + +R++ + +Q+ + YGN I
Sbjct: 726 PGELIINWTPVSREYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGNDSIQP--- 782
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
YT +EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P
Sbjct: 783 -----YTPFEVKIRSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEP 837
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ +++ G L+G+ I+YWK + E A + A + GL P+TKY+V V AYN
Sbjct: 838 ---VLQDMNGILLGYEIRYWKAGDNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYN 894
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
AG GP S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 895 RAGTGPASPSADAMTVKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSKIRTKEAVPSVAPSGLSGGGGAPGELIINWTPVS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
RE G G+ + + ++ + P A Y++ +QP T + VK+
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADAQYFVYGND-------SIQPYTPFEVKI 790
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
+YN G+GPES L + + P+ P+ V KG + + ++V+W V ++GY
Sbjct: 791 RSYNRRGDGPESLTALVYSAEEEPRVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGY 849
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
++R W+ D A D + G A + L+P +YH+ V A++ G G S A
Sbjct: 850 EIRYWKAG-DNEAAADRVRTAGLDTSARVTGLNPNTKYHVTVRAYNRAGTGPASPSA 905
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S +S +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLSLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISILCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTSDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + L I VS +D G Y C
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRK---VDGSLSPQWATAEPTLQIPSVSFEDEGTYEC 308
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N G D +GR+IV P + + + NL+ C+A + V W N
Sbjct: 309 EAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLRN 365
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + + + G L + S D+G Y+CV ++ G I + V+
Sbjct: 366 GEPLASQN-------RVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ MD S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HMDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWATAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTDMNLEPGSRHQLMGGNLVIMSPTKTQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHM-DFSTKS 221
>sp|Q61330|CNTN2_MOUSE Contactin-2 OS=Mus musculus GN=Cntn2 PE=2 SV=2
Length = 1040
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 272/531 (51%), Gaps = 12/531 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG ++I C P AAPK +W K I+G+ R + +G L+I +SR D G Y+C
Sbjct: 432 AARGGEISIPCQPRAAPKATILWSKGTEILGNSTRVTVTLDGTLIIRNISRSDEGKYTCF 491
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G L V + P I NL L+C A + +D+ + WT +
Sbjct: 492 AENFMGKANSTGILSVRDA-TKITLAPSSADINVGDNLTLQCHASHDPTMDLTFTWTLDD 550
Query: 122 VRIG-NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ + ++ G L I NA G Y C+ ++ V S + TV+V GPP
Sbjct: 551 FPVDFDKPGGHYRRASVKETIGDLTILNAQLRHGGTYTCMAQTVVDGASKEATVLVRGPP 610
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
G PGGV V ++ T+ + W+ G N PI Y + ART + W V + + E
Sbjct: 611 GPPGGVVVRDIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPSGKWKQVRTNPVNIE---- 666
Query: 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300
G E + L+PW YEF+V A N LG GEPS PS + T P APS + GGGG
Sbjct: 667 -GNAETAQVLGLMPWMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGA 725
Query: 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYT 360
G+L+I+W P+ RE QN Y + +R++ + +Q+ + + V S YT
Sbjct: 726 PGELTINWTPMSREYQNGDGFGYLLSFRRQGSSSWQTARVPG-ADTQYFVYSNDSIHPYT 784
Query: 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN 420
+EVK+++ N G GPES ++SAE+ P+VAP V+++G +S+ +NV+W P + ++
Sbjct: 785 PFEVKIRSYNRRGDGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEP---VLQD 841
Query: 421 IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480
+ G L+G+ I+YWK + E A + + A + GL P+TKY+V V AYN AG GP
Sbjct: 842 MNGILLGYEIRYWKAGDKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPA 901
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +++ + W V P E + GYK+
Sbjct: 902 SPSADAMTMKPPPRRPPGNISWT-FSSSSLSLKWDPVVPLRNESTVTGYKM 951
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E +P VAP G+ G + + W P+
Sbjct: 680 WMDYEFRVSASNILGTGEPSGPSSRIRTKEAVPSVAPSGLSGGGGAPGELTINWTPMS-- 737
Query: 418 RENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
RE G G+ + + ++ + +TA + T + P T + VK+ +YN G
Sbjct: 738 REYQNGDGFGYLLSFRRQGSSSWQTARVPGADTQYFVYSNDSIHPYTPFEVKIRSYNRRG 797
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536
+GPES + + + P+ P+ V KG + + ++V+W V ++GY++R W+
Sbjct: 798 DGPESLTAIVYSAEEEPKVAPAKVWAKGSSSSEMNVSWEPVLQDMNGI-LLGYEIRYWKA 856
Query: 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591
D A D + G A + L P +YH+ V A++ G G S A M
Sbjct: 857 G-DKEAAADRVRTAGLDSSARVTGLYPNTKYHVTVRAYNRAGTGPASPSADAMTM 910
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G N+ C P+P W ++G + S R ++ G+L S ++ +DSG+Y C A N
Sbjct: 343 GSNLRWGCAAAGKPRPMVRWLRNGEPLASQNRVEVLA-GDLRFSKLNLEDSGMYQCVAEN 401
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
HG + L V + Q P + I A R ++ +W+ +
Sbjct: 402 KHGTIYASAELAVQALAPDFRQNPVRRLIPAARGGEISIPCQPRAAPKATILWSKGTEIL 461
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIST 170
GN + +DG L+ I N S +D G+Y C ++ +GK ++
Sbjct: 462 GNS-----TRVTVTLDGTLI-IRNISRSDEGKYTCFAENFMGKANS 501
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
YA G VT+ C P P+ W+K DG++ G + L I VS +D G Y
Sbjct: 252 YALVGQQVTLECFAFGNPVPRIKWRKVDGSLSPQWGTAE----PTLQIPSVSFEDEGTYE 307
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D +GR+IV P + + + NL+ C+A + V W
Sbjct: 308 CEAENSKGRDTVQGRIIVQAQPEWLKVI-SDTEADIGSNLRWGCAAAGKPRPMVR--WLR 364
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
NG + + + + + G L + + D+G Y+CV ++ G I + V+
Sbjct: 365 NGEPLASQN-------RVEVLAGDLRFSKLNLEDSGMYQCVAENKHGTIYASAELAVQA 416
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 30/194 (15%)
Query: 4 EGGNVTIFCNPEAA-PKPKFVWKKDG--NIIGSGGRRKIFEN-GNLLISPVSRDDSGIYS 59
EG V + CNP A P + W + N I + GR + + GNL I+ + D G YS
Sbjct: 149 EGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYS 208
Query: 60 CTATNVHGMDESKGRLIV-------------LHGPSYYEQLPPKITIAAHRNLQLRCSAH 106
C AT+ +D S + L PS + PP+ + + L C A
Sbjct: 209 CLATS--HLDFSTKSVFSKFAQLNLAAEDPRLFAPSIKARFPPETYALVGQQVTLECFAF 266
Query: 107 TEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166
+ RI ++ +P L+I + SF D G YEC +++ G
Sbjct: 267 GNPV-----------PRIKWRKVDGSLSPQWGTAEPTLQIPSVSFEDEGTYECEAENSKG 315
Query: 167 KISTKTTVIVEGPP 180
+ + + +IV+ P
Sbjct: 316 RDTVQGRIIVQAQP 329
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLI-SPVSRDDSGIYSCTATN 64
VT+ C A+P + WK +G + G R GNL+I SP D+G+Y C A+N
Sbjct: 58 QVTLACRARASPPATYRWKMNGTEMNLEPGSRHQLMGGNLVIMSPTKAQDAGVYQCLASN 117
Query: 65 VHGMDESKG---RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
G SK R L S E+ P K L AH L +Y W N
Sbjct: 118 PVGTVVSKEAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGL---SYRWLLN- 173
Query: 122 VRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKISTKT 172
E PN I DG G L I + +D G Y C+ S + STK+
Sbjct: 174 -----------EFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHL-DFSTKS 221
>sp|P28685|CNTN2_CHICK Contactin-2 OS=Gallus gallus GN=CNTN2 PE=1 SV=1
Length = 1036
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 271/532 (50%), Gaps = 13/532 (2%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V I C P AAPK +W K ++ + R I +G L++ +S+ D G Y+C
Sbjct: 425 AARSGKVIIPCQPRAAPKATVLWTKGTELLTNSSRVTITADGTLILQNISKSDEGKYTCF 484
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G S G ++ + + P I NL L+C A + +D+ + W+ +
Sbjct: 485 AENFMGKANSTG-ILSVRDATKITLAPSSADINVGENLTLQCHASHDPTMDLTFTWSLDD 543
Query: 122 VRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
I ++D +E ++ G L I NA +G Y C ++ V S T+ V GP
Sbjct: 544 FPI-DLDKSEGHYRRASVKEAVGDLAIVNAQLKHSGRYTCTAQTVVDSTSESATLTVRGP 602
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDR 239
PG PGGV V ++ T+ + W+ G N PI Y I ART ++ W + + + E
Sbjct: 603 PGPPGGVVVRDIGDTTVQLSWSRGFDNHSPIARYSIEARTLLSNKWKQMRTNPVNIE--- 659
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G E + L+PW YEF+V+A N LG GEPS PS + T P APS +GGGGG
Sbjct: 660 --GNAETAQVVNLIPWMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGG 717
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+L I+W P R+ QN Y + +RKK + + + ++ V R S Y
Sbjct: 718 APNELIINWTPTLRDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHY-VYRNESIGPY 776
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
T +EVK++A N G GPES ++SAE+ P+VAP V ++ S+ ++V+W P+E +
Sbjct: 777 TPFEVKIKAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVE--QG 834
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++ G L+G+ I+YWK+ + EE A + A + GL P+TKY+V V AYN AG GP
Sbjct: 835 DMTGVLLGYEIRYWKDGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAGP 894
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
S T + P++PP + + +TV + W V +E + GYK+
Sbjct: 895 PSPSTNITTTKPPPRRPPGNISWT-LTGSTVTIKWDPVVAQADESAVTGYKM 945
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 359 YTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
+ +YE +V A N +G G P I + E P VAP G+ G + + W P +
Sbjct: 673 WMDYEFRVLASNILGVGEPSLPSSKIRTKEAAPTVAPSGLGGGGGAPNELIINWTPT--L 730
Query: 418 RENIRGRLIGHRIKYWKEDN--------PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
R+ G G+ + + K+ P +++Y+ R + P T + VK+
Sbjct: 731 RDYQNGDGFGYILSFRKKGTQGWLTARVPHAESLHYVYRNE-------SIGPYTPFEVKI 783
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
AYN GEGPES + + + P+ P V K + + + V+W V ++GY
Sbjct: 784 KAYNRKGEGPESLTAIVYSAEEEPKVAPFRVTAKAVLSSEMDVSWEPVEQGDMTGVLLGY 843
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++R W+ D D A D + G A + L+P +YH+ V A++ G G
Sbjct: 844 EIRYWK-DGDKEEAADRVRTAGLVTSAHVTGLNPNTKYHVSVRAYNRAGAG 893
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 13/178 (7%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
YA G VT+ C P P+ W+K + GS + + L I V +D G Y C
Sbjct: 245 YALTGQMVTLECFAFGNPVPQIKWRK---LDGSQTSKWLSSEPLLHIQNVDFEDEGTYEC 301
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N+ G D +GR+I+ P + + + A LR S A W +
Sbjct: 302 EAENIKGRDTYQGRIIIHAQPDWLDVI---TDTEADIGSDLRWSCVASGKPRPAVRWLRD 358
Query: 121 GVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G + + + I + GG L + D+G Y+CV ++ G + + V+
Sbjct: 359 GQPLASQN-------RIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 409
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 69/178 (38%), Gaps = 33/178 (18%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLIS-PVSRDDSGIYSCTATNV 65
VT+ C A P + WK +G + G R G+L+IS PV D+G Y C ATN
Sbjct: 52 VTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNA 111
Query: 66 HGM---DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS--AHTEELLDVAYIWTHN 120
G E+ R L S E+ P KIT + CS H L +Y W N
Sbjct: 112 RGTVVSREASLRFGFLQEFSAEERDPVKIT--EGWGVMFTCSPPPHYPAL---SYRWLLN 166
Query: 121 GVRIGNMDLNELETPN-INIDG--------GLLEITNASFADAGEYECVVKSTVGKIS 169
E PN I DG G L I +D G Y C S + I+
Sbjct: 167 ------------EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFIT 212
>sp|Q8AXZ4|CNT1A_DANRE Contactin-1a OS=Danio rerio GN=cntn1a PE=2 SV=1
Length = 1032
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 282/597 (47%), Gaps = 35/597 (5%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
G V C P AAP+P W K ++ + R I+ +G+L + +S+ D G Y+C A
Sbjct: 437 ARNGRVVFECRPRAAPRPNITWSKGTELLHNSSRISIWLDGSLELLNISKSDEGKYTCFA 496
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G S G L + + P ++ + ++ C A + LD+ +IW+ +G
Sbjct: 497 ENDRGRANSTGSLSITDA-TKITLAPSNADVSVGEDARMECVASHDPGLDLTFIWSLDGH 555
Query: 123 RIG-NMDLNELETPNINIDG---GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
I D + + G L IT+ AG Y C ++ V + ++V G
Sbjct: 556 TINLQRDAQHYQRKMDSASGTSSSELLITHTQLRHAGRYSCTAQTPVDNTTASAELVVRG 615
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR-TNWNSTWFNVSEHVIGKEV 237
PPG PGGV+V EV S + W+ G N PI+ Y + R + W + + + E
Sbjct: 616 PPGPPGGVRVDEVTSDSVRVLWSHGTDNLSPISRYTVQLRESAAQQDWRDAATSPVNVE- 674
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
G E + L+PW+ YEF+VIA N LG G PS PSP+ T +P APS IGGG
Sbjct: 675 ----GNAEMATVVNLLPWTEYEFRVIATNTLGTGPPSEPSPKTTTREARPIVAPSDIGGG 730
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF 357
GG +L+I+W P+ + N Y I ++ ND E+ T+ + V + P
Sbjct: 731 GGTSRELTITWTPVQSQYYYGSNFGYIIAFKPHNDPEWLRVTVTD-PEAQKYVHKDPKIP 789
Query: 358 YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELI 417
T +EVK++A N G GP S I+SA+D+P AP +R ++T V W P++L
Sbjct: 790 PSTRFEVKMKAFNSQGEGPFSNSAFIYSAQDVPAEAPIITEARALSATEAIVIWVPVQL- 848
Query: 418 RENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG 476
+ ++++YW+E E +A L + N + ++PD+ Y V+V A N AG
Sbjct: 849 -----PTVERYQVRYWRESVENEASAQRVLVSSRENHTRLDNMKPDSHYLVEVRACNGAG 903
Query: 477 EGPESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
GP S+R T + P +PP + K + T++++ W V E + GYKV +
Sbjct: 904 YGPASQRNRIYTKKSPPSRPPKIISTKMHYSGTSINIAWEKVESLNNESTVAGYKVLYRQ 963
Query: 536 VDQDMSRANDTIIPVGN--TLDADIVDLSPGKR--YHMRVLAFSNGGDGRMSSPAIT 588
Q P G T + +DL P +R Y + V A S GGDG ++ IT
Sbjct: 964 HGQ----------PSGTLYTTEKQSIDL-PMRRGEYLVEVRAHSEGGDGAVAQVRIT 1009
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
GG+ + C PKP + K+G++ G + S + +DSG+Y C A N
Sbjct: 354 GGDYIMSCQASGKPKPHVHFLKNGHMYMKGHEVRF--------SRLGFEDSGMYQCVAEN 405
Query: 65 VHGMDESKGRLIVL-HGPSY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI----WT 118
HG+ + L V PS+ Y + PK+ A + + C ++ +
Sbjct: 406 RHGVIHANAELRVFASAPSFQYNPVKPKLLGARNGRVVFECRPRAAPRPNITWSKGTELL 465
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
HN RI +I +DG LE+ N S +D G+Y C ++ G+ ++ ++ +
Sbjct: 466 HNSSRI-----------SIWLDGS-LELLNISKSDEGKYTCFAENDRGRANSTGSLSI 511
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLL-ISPVSRDDSGIYS 59
+A G NVT+ C P P+ W+K ++ R + +G LL + + +D G+Y
Sbjct: 260 WALLGQNVTLECFALGNPIPQIRWRKLDGVLPPL-RHDVSMSGALLHLYSLQYEDEGLYE 318
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G D K L V P + EQ+ + +E + YI +
Sbjct: 319 CEADNSKGKDWHKTHLYVEGAPDWLEQI-----------------SSSEVDIGGDYIMSC 361
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
++ L+ ++ + G + + F D+G Y+CV ++ G I + V
Sbjct: 362 QASGKPKPHVHFLKNGHMYMKGHEVRFSRLGFEDSGMYQCVAENRHGVIHANAELRV 418
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 87/234 (37%), Gaps = 36/234 (15%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKF--------VWKKDGNIIGSGGRRKIFEN-GNLLISPVS 51
Y EG + C AP P F + + I RR + ++ GNL IS V
Sbjct: 155 YVKEGQGAVLLC----APPPHFPEDLSFRWMLNEFPEFIPLDQRRFVSQSTGNLYISTVR 210
Query: 52 RDDSGIYSCTATNVHGMDESKGRLIVLH--GPSYYEQLPPKITIAA-------HRNLQLR 102
DSG YSC ++ + I L + P I + + +N+ L
Sbjct: 211 STDSGNYSCFVSSPAIAKSVFSKFIPLVPIAERSLRKYPADIKVKSPDSWALLGQNVTLE 270
Query: 103 CSAHTEELLDVAYIWTHNGVRIGNMDLNELETP---NINIDGGLLEITNASFADAGEYEC 159
C A + + + L+ + P ++++ G LL + + + D G YEC
Sbjct: 271 CFALGNPIPQIRW-----------RKLDGVLPPLRHDVSMSGALLHLYSLQYEDEGLYEC 319
Query: 160 VVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHY 213
++ GK KT + VEG P + EV I + +P H+
Sbjct: 320 EADNSKGKDWHKTHLYVEGAPDWLEQISSSEVDIGGDYIMSCQASGKPKPHVHF 373
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII----GSGGRRKIFENGNLLIS-PVSRDDSGIYSCTA 62
+T+ C A P + W+ + + GS + E GNLLIS P +G Y+C A
Sbjct: 66 ITLTCRTRANPPASYRWRLNNAELVLAEGSDPHYSVSE-GNLLISSPDKSKHAGNYTCVA 124
Query: 63 TNVHG-MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+N +G + + R+ + + + + + L C+ D+++ W N
Sbjct: 125 SNQYGSVTSRRARVQFGYLDMFSTDEREAVYVKEGQGAVLLCAPPPHFPEDLSFRWMLNE 184
Query: 122 V-RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKS 163
+D ++ G L I+ D+G Y C V S
Sbjct: 185 FPEFIPLDQRRF----VSQSTGNLYISTVRSTDSGNYSCFVSS 223
>sp|P20241|NRG_DROME Neuroglian OS=Drosophila melanogaster GN=Nrg PE=1 SV=2
Length = 1302
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 160/584 (27%), Positives = 266/584 (45%), Gaps = 31/584 (5%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G NVTI C +PKP W + N + +GGR + NG+L I V+ D+G Y+C A
Sbjct: 445 DGRNVTIKCRVNGSPKPLVKWLRASNWL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQ 503
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G ++ G L+V + Q P +AA ++ RC+ ++ L++ W +G
Sbjct: 504 NKFGEIQADGSLVVKEH-TRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQS 562
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183
I D E + + + L I D+GEY CV ++ + + + + +IV+ P P
Sbjct: 563 I---DF-EAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAP 618
Query: 184 GGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTG 242
+ + A I W N PI HY I T++ ++W E V
Sbjct: 619 K-LTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---------P 668
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
++S + PW+ Y F+VIA N++G PS+ S T D P++ P + G G +
Sbjct: 669 NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPN 728
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKEYGNVGIAVVRIPSEFYYTE 361
+L ISW P+P + NAPN +Y + W++ +++ + ++ I + P+ + +
Sbjct: 729 NLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPT---FVK 785
Query: 362 YEVKVQAINDVGPGP-ESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRE 419
Y +KV AIND G +E V +S ED P AP R +ST+ + W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVS--EE 843
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
++RG G++I+ W E+ EE + + AL+ +PD+K Y +++AYN GP
Sbjct: 844 SVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGP 903
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
S T P P + + + + W+ P + + GYK+ EV +
Sbjct: 904 PSAVIDFDTPEGVP-SPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKES 960
Query: 540 M---SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
R D I + L P +Y + + A + G+G
Sbjct: 961 YVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 231/613 (37%), Gaps = 88/613 (14%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIY 58
A E V C P+PK W +G I RR + +N +I+ V + D+G Y
Sbjct: 350 AAEDEEVVFECRAAGVPEPKISWIHNGKPIEQSTPNPRRTVTDNTIRIINLV-KGDTGNY 408
Query: 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118
C ATN G L V P + P ++ RN+ ++C + V ++
Sbjct: 409 GCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRA 468
Query: 119 HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-- 176
N + G ++ G LEI + +F+DAG+Y C ++ G+I +++V
Sbjct: 469 SNWLTGGRYNVQA---------NGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKE 519
Query: 177 -----------EGPPGLPGGVQVVEVHKTSATIQ---WTDGAT---NGRPITHYKIIART 219
E G + E H + I+ W DG + +P +T
Sbjct: 520 HTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR-----FVKT 574
Query: 220 NWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279
N NS I K ++ +G E V + + N + P++P
Sbjct: 575 NDNSL-------TIAKTMELDSG------EYTCVARTRLDEATARANLIVQDVPNAP--- 618
Query: 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
++ G + I WE + +P ++Y I +
Sbjct: 619 -------------KLTGITCQADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAA 663
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVF 398
++ N + V S + Y +V A N +G P S + + D+P P V
Sbjct: 664 YEKVPNTDSSFVVQMSP--WANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVV 721
Query: 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---L 455
+G + ++W P+ I N H WK D P A + + +W +
Sbjct: 722 GQGTEPNNLVISWTPMPEIEHNAPNF---HYYVSWKRDIP---AAAWENNNIFDWRQNNI 775
Query: 456 IVGLQPD-TKYYVKVMAYNNAGEGP-ESERYLERTYRKAPQKPPSAVHIKGINPTTV-HV 512
++ QP KY +KV+A N+ GE +E + + P P+ ++ I +T ++
Sbjct: 776 VIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYM 835
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
W VS GYK++ W ++ + + G+T +A + P + + R+L
Sbjct: 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVK-GDTHNALVTQFKPDSKNYARIL 894
Query: 573 AFSNGGDGRMSSP 585
A+ +GR + P
Sbjct: 895 AY----NGRFNGP 903
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 20/227 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSC 60
A G + +FC P P+ VW KDG I R G +L+I + DD+G Y+C
Sbjct: 258 ALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTC 317
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
+N G +S ++ ++ Y+ + P T A + C A + + W HN
Sbjct: 318 DVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAG--VPEPKISWIHN 375
Query: 121 GVRIGNMDLNELETPN--INIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
G I E TPN + + I N D G Y C +++G + + V+
Sbjct: 376 GKPI------EQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQA 429
Query: 179 -PPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221
PP + P V V+ + + NG P K + +NW
Sbjct: 430 EPPTISEAPAAVSTVDGRNVTIKCR-----VNGSPKPLVKWLRASNW 471
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 36/250 (14%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS---ISWEPLPRE 314
Y KV+A N+ G ++ + D+P AP+ +I + ++W P+ E
Sbjct: 786 YLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMR--QITSSTSGYMAWTPVSEE 843
Query: 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY-YTEYEVKVQAINDVG 373
YKI +N+ E E L+E G + ++F ++ ++ A N
Sbjct: 844 SVRGHFKGYKIQTWTENEGE---EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRF 900
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW 433
GP S V+ + E +P QG+ + S+A + W + + N G+L G++I Y
Sbjct: 901 NGPPSAVIDFDTPEGVPSPV-QGLDAYPLGSSAFMLHWK--KPLYPN--GKLTGYKIYY- 954
Query: 434 KEDNPEETAVYYLS------------RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
EE Y+ R TR + GL+P++KY + + A GEG S
Sbjct: 955 -----EEVKESYVGERREYDPHITDPRVTR--MKMAGLKPNSKYRISITATTKMGEG--S 1005
Query: 482 ERYLERTYRK 491
E Y+E+T K
Sbjct: 1006 EHYIEKTTLK 1015
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens GN=CHL1
PE=1 SV=4
Length = 1208
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 275/592 (46%), Gaps = 41/592 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR-KIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+P+ W+K + GRR I+ENG L I+ + +D+G YSC
Sbjct: 438 GYSAFLHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVE 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAIGKTAVTANLDIRNA-TKLRVSPKNPRIPKLHMLELHCESKCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C + + + T V V P
Sbjct: 557 EA---FEINGTEDGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
P + + E S + W GA + I+ Y + N W +E+ R
Sbjct: 614 PPENLHLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G+K I L P+ Y+F+VIA NE+G +PS PS + TP P + P I
Sbjct: 665 VQGKKTTVILP-LAPFVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFY 358
+ ++ I WEPL +QN P + Y++ W+ + E++ ET+ + +R+ +
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYRVTWKPQGAPVEWEEETVTNH------TLRVMTPAV 777
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
Y Y+VKVQAIN +G GP+ + VT++S ED P AP NST + VTW+ + +
Sbjct: 778 YAPYDVKVQAINQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVP--K 835
Query: 419 ENIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
+ + GRL G++I +WK +P+E + S RN ++ L +++++ V+A
Sbjct: 836 DRVHGRLKGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDAFSEFHLTVLA 894
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
YN+ G GPESE Y+ +T P++ P+ + + ++ T ++W P + GY +
Sbjct: 895 YNSKGAGPESEPYIFQTPEGVPEQ-PTFLKVIKVDKDTATLSWGL--PKKLNGNLTGYLL 951
Query: 532 RVWEVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
+ ++ ++ ND I + + +L+ +Y + A ++ G G+
Sbjct: 952 QYQIINDTYEIGELNDINITTPSKPSWHLSNLNATTKYKFYLRACTSQGCGK 1003
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 124/607 (20%), Positives = 225/607 (37%), Gaps = 56/607 (9%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTA 62
G N + C E P+P W+ +G+ + + +F + + + + + +Y C A
Sbjct: 345 GSNGILLCEAEGEPQPTIKWRVNGSPVDNHPFAGDVVFPR-EISFTNLQPNHTAVYQCEA 403
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRN----LQLRCSAHTEELLDVAYIWT 118
+NVHG + + V+ + P I N + H E + +
Sbjct: 404 SNVHGTILANANIDVV-------DVRPLIQTKDGENYATVVGYSAFLHCEFFASPEAVVS 456
Query: 119 HNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
V ++ LE +I + G L+I + DAG Y C V++ +GK + + +
Sbjct: 457 WQKVE----EVKPLEGRRYHIYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIR 512
Query: 178 GPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
L P ++ ++H + + +H K + +W+ + + G
Sbjct: 513 NATKLRVSPKNPRIPKLHMLELHCE-------SKCDSHLKHSLKLSWSKD--GEAFEING 563
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
E GR N+ + T E + I S+ T D P P +
Sbjct: 564 TE----DGRIIIDGANLTISNVTLEDQGIYCCSAHTALDSAADITQVTVLDVP-DPPENL 618
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ + ++WE N + K+ ++ T + + + P
Sbjct: 619 HLSERQNRSVRLTWEAGADHNSNISEYIVEFEGNKEEPGRWEELTRVQGKKTTVILPLAP 678
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ Y+ +V A+N+VG S+ + P PQ + + + + W P
Sbjct: 679 ----FVRYQFRVIAVNEVGRSQPSQPSDHHETPPAAPDRNPQNIRVQASQPKEMIIKWEP 734
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD--TKYYVKVMA 471
++ + +N G + +R+ WK P+ V + T N L V + P Y VKV A
Sbjct: 735 LKSMEQN--GPGLEYRVT-WK---PQGAPVEWEEETVTNHTLRV-MTPAVYAPYDVKVQA 787
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
N G GP+ + + P P + IN T V VTW V + GY++
Sbjct: 788 INQLGSGPDPQSVTLYSGEDYPDTAPVIHGVDVINSTLVKVTWSTVPKDRVHGRLKGYQI 847
Query: 532 RVWE----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPA 586
W+ +D I+ ++ +V L +H+ VLA+++ G G S P
Sbjct: 848 NWWKTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDAFSEFHLTVLAYNSKGAGPESEPY 907
Query: 587 ITFQMGE 593
I FQ E
Sbjct: 908 I-FQTPE 913
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P+ W K G + G K L I VS D G Y CTA+
Sbjct: 254 KGEILLLECFAEGLPTPQVDWNKIGGDLPKGRETKENYGKTLKIENVSYQDKGNYRCTAS 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G +IV P + ++ P + N L C A E + W NG
Sbjct: 314 NFLGTATHDFHVIVEEPPRWTKK-PQSAVYSTGSNGILLCEAEGEPQPTIK--WRVNGSP 370
Query: 124 IGN 126
+ N
Sbjct: 371 VDN 373
Score = 36.6 bits (83), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNI--IGSGGRRKIFENGNLLISPVSRDDS-GIYSC 60
EG + + CNP P ++ + + I R + + G+L + V DS Y C
Sbjct: 145 EGDPIVLPCNPPKGLPPLHIYWMNIELEHIEQDERVYMSQKGDLYFANVEEKDSRNDYCC 204
Query: 61 TAT--NVHGMDESKGRLIVLHGPSYYEQLPPK-------------ITIAAHRNLQLRCSA 105
A + + + + ++ + +Q PK ITI L L C A
Sbjct: 205 FAAFPRLRTIVQKMPMKLTVNSSNSIKQRKPKLLLPPTESGSESSITILKGEILLLECFA 264
Query: 106 HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165
E L W G G++ N G L+I N S+ D G Y C + +
Sbjct: 265 --EGLPTPQVDWNKIG---GDLPKGRETKENY---GKTLKIENVSYQDKGNYRCTASNFL 316
Query: 166 GKISTKTTVIVEGPP 180
G + VIVE PP
Sbjct: 317 GTATHDFHVIVEEPP 331
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 241/522 (46%), Gaps = 35/522 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK-KDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + + C A+PK VW+ D G R ENG L I + +D+G YSC
Sbjct: 438 GYSAFLHCEYFASPKATVVWEVADETHPLEGDRYHTHENGTLEIYRTTEEDAGSYSCWVD 497
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWTHNG 121
N G L + + + P I L+L C + + L + W+ +G
Sbjct: 498 NAMGKAVITANLDIRNA-TKLRVSPKNPRIPKSHVLELYCESQCDSHLKHSLKLSWSKDG 556
Query: 122 VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181
++N E I IDG L I+N + D G Y C ++++ S KT V V G P
Sbjct: 557 EA---FEMNGTEDGRIVIDGAYLTISNITAEDQGVYSCSAQTSLDSTSEKTQVTVLGVPD 613
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKEVDR 239
PG + + E S + W G + I+ Y + N W +E+ R
Sbjct: 614 PPGNLHLSERQNRSVRLSWEAGDDHNSKISEYIVEFEGNREEPGKW---------EELTR 664
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
G +E + L P+ Y+F+V A NE+G S PS + TP P + P I
Sbjct: 665 VQG-EETDVVLSLAPYVRYQFRVTAVNEVGRSHASLPSDHHETPPAAPDKNPQNIRVQAS 723
Query: 300 KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359
+ ++ I WEPL +QN P + YK+ W+ + E E + V +R+ + Y
Sbjct: 724 QPKEMIIKWEPLKSMEQNGPGLEYKVSWKPQGAPEEWEEEI-----VTNHTLRVMTPTVY 778
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
Y+VKVQAIN +G P+ + VT++S ED P AP NST + VTW+ I +E
Sbjct: 779 APYDVKVQAINQLGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIP--KE 836
Query: 420 NIRGRLIGHRIKYWK-------EDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
+ G L G++I +WK +P+E + S RN ++ L P +++++ V+AY
Sbjct: 837 TVHGLLRGYQINWWKTKSLLDGRTHPKEVNILRFS-GQRNSGMVPSLDPFSEFHLTVLAY 895
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
N+ G GPESE Y+ +T P++ PS + + ++ T ++W
Sbjct: 896 NSKGAGPESEPYIFQTPEGVPEQ-PSFLKVIKVDKDTATLSW 936
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 18/244 (7%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP----QGVFSRGFNSTAINVTWNPI 414
Y Y+ +V A+N+VG S + P AP Q + + + + W P+
Sbjct: 679 YVRYQFRVTAVNEVG---RSHASLPSDHHETPPAAPDKNPQNIRVQASQPKEMIIKWEPL 735
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN 474
+ + +N G + +++ + + PEE ++ T P Y VKV A N
Sbjct: 736 KSMEQN--GPGLEYKVSWKPQGAPEEWEEEIVTNHTLRVMTPTVYAP---YDVKVQAINQ 790
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVW 534
G P+ + + P P + +N T V VTW + + GY++ W
Sbjct: 791 LGSSPDPQPVTLYSGEDYPSTAPVIQRVDVMNSTLVKVTWSSIPKETVHGLLRGYQINWW 850
Query: 535 E----VDQDMSRANDTIIPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ +D I+ ++ +V L P +H+ VLA+++ G G S P I F
Sbjct: 851 KTKSLLDGRTHPKEVNILRFSGQRNSGMVPSLDPFSEFHLTVLAYNSKGAGPESEPYI-F 909
Query: 590 QMGE 593
Q E
Sbjct: 910 QTPE 913
Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
+G + + C E P P W K G+ + G L I +S D G Y CTA
Sbjct: 254 KGDTLLLECFAEGLPTPHIQWSKPGSELPEGRATIEVHEKTLKIENISYQDRGNYRCTAN 313
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N+ G S + + P +++ P + + L C A E + W NG+
Sbjct: 314 NLLG-KASHDFHVTVEEPPRWKKKPQSAVYSTGSSGILLCEAEGEPQPTIK--WRLNGLP 370
Query: 124 I 124
I
Sbjct: 371 I 371
>sp|Q92823|NRCAM_HUMAN Neuronal cell adhesion molecule OS=Homo sapiens GN=NRCAM PE=1 SV=3
Length = 1304
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/602 (27%), Positives = 266/602 (44%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ ENG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPLPTIEWFKGAK--GSALHEDIYVLHENGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P++ + P + + C + L + +W + N +
Sbjct: 534 AKNEVHLEI-KDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTVLWLKD-----NRE 587
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
L E +D L + + S D+G Y CV +T+ +S + V P
Sbjct: 588 LPSDE--RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGKE 236
P P +++ + S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P + P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+ND+G PE VV S ED+P VAP V NST V W+P+
Sbjct: 813 TF--VPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
L ++IRG L G+RI YWK + + ++ + ++ ++ GL+P + Y + V
Sbjct: 871 L--KSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S + T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASPDRVFNTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 TLKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEA 1044
Query: 587 IT 588
+T
Sbjct: 1045 VT 1046
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 132/618 (21%), Positives = 227/618 (36%), Gaps = 70/618 (11%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP+ W +G I RKI + ++ S V S +Y
Sbjct: 375 GEDG--TLICRANGNPKPRISWLTNGVPIEIAPDDPSRKI-DGDTIIFSNVQERSSAVYQ 431
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKIT---IAAHRNLQLRCSAHTEELLDVAYI 116
C A+N +G + + VL P L P T + A+R L C+ L + +
Sbjct: 432 CNASNEYGYLLANAFVNVLAEPPRI--LTPANTLYQVIANRPALLDCAFFGSPLPTIEWF 489
Query: 117 WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G + + D+ L + G LEI A G Y CV ++ +G + + +
Sbjct: 490 KGAKGSAL-HEDIYVLH------ENGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEI 542
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
+ P + V+ E A +Q + + H ++ T W + + E
Sbjct: 543 KDPTWI---VKQPEY----AVVQRGSMVSFECKVKHDHTLSLT---VLWLKDNRELPSDE 592
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS----------SPSPQYNTPADK 286
R+T K+ + + + + +A L S +P+P Y+ P
Sbjct: 593 --RFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVP--- 647
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKE 342
P + + +SW P + N+P I Y+ K Q+E
Sbjct: 648 --NPPFDLELTDQLDKSVQLSW--TPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV--- 700
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRG 401
G A +++ Y Y +V A+N +G SE + + P P V G
Sbjct: 701 SGTQTTAQLKLSP---YVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLG 757
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ +TW P+ N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 758 SEPDNLVITWKPLNGFESN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGTPT 813
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
Y +KV A N+ G PE + + P P V + +N T V W V
Sbjct: 814 FVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKS 873
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLAFS 575
+ GY++ W+ Q S+ N I G+ + L P Y + V +
Sbjct: 874 IRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVRVVN 932
Query: 576 NGGDGRMSSPAITFQMGE 593
G+G +SP F E
Sbjct: 933 GKGEGP-ASPDRVFNTPE 949
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ R +++N L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPIIYWAKEDGMLPKN--RTVYKNFEKTLQIIHVSEADSGNYQCIA 342
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 343 KNALGAIHHTISVRVKAAP-YWITAPQNLVLSPGEDGTLICRANGNPKPRIS--WLTNGV 399
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I + P+ IDG + +N + Y+C + G + V V P
Sbjct: 400 PIEIAP----DDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVLAEP 453
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 124/325 (38%), Gaps = 61/325 (18%)
Query: 183 PGGVQVVEVHKTSATIQW-------TDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
PG V+V V+ T A + W G G I ++K + + N I K
Sbjct: 849 PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRN-------RRHIEK 901
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ + G K + L P+S Y V N G G P+SP +NTP P APS +
Sbjct: 902 KILTFQGSKTHGMLPGLEPFSHYTLNVRVVNGKGEG-PASPDRVFNTPEGVP-SAPSSLK 959
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
+ L++ W+P N Y + ++ N T E G + ++IP+
Sbjct: 960 IVNPTLDSLTLEWDP--PSHPNGILTEYTLKYQPINSTH-------ELG--PLVDLKIPA 1008
Query: 356 EF---------YYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVA----PQGVFS 399
+ T Y+ A G G E V T+ A +P Q V
Sbjct: 1009 NKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVTTVDEAGILPPDVGAGKVQAVNP 1068
Query: 400 RGFNSTAI------NVTWN--PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 451
R N TA N++W E + + + G + ++ KE + +R
Sbjct: 1069 RISNLTAAAAETYANISWEYEGPEHVNFYVEYGVAGSKEEWRKE----------IVNGSR 1118
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAG 476
++ + GL P T Y V+V A ++G
Sbjct: 1119 SFFGLKGLMPGTAYKVRVGAVGDSG 1143
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDS----GIYS 59
N+ I C + P P F W ++G + G L+I+ +S + G+Y
Sbjct: 63 NIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQ 122
Query: 60 CTATNVHGMDESKGRLIV-LHGPSYYEQLPPKITIAAHRNLQLRC 103
CTA N G S ++ P + ++ IT+ + ++L L C
Sbjct: 123 CTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSGQSLVLPC 167
>sp|P35331|NRCAM_CHICK Neuronal cell adhesion molecule OS=Gallus gallus PE=1 SV=1
Length = 1284
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 249/549 (45%), Gaps = 50/549 (9%)
Query: 10 IFCNPEAAPKPKFVWKK--DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C +PKP+ W + G+I+ G +NG L I +D +G Y+C A N G
Sbjct: 450 IDCAYFGSPKPEIEWFRGVKGSIL-RGNEYVFHDNGTLEIPVAQKDSTGTYTCVARNKLG 508
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM 127
+++ +L V P+ + P I C + L IW + N
Sbjct: 509 KTQNEVQLEV-KDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-----NN 562
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK----------TTVIVE 177
+L + E + D L I N + D G Y C+V +T+ +S T I+
Sbjct: 563 ELPDDERFLVGKDN--LTIMNVTDKDDGTYTCIVNTTLDSVSASAVLTVVAAPPTPAIIY 620
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIGK 235
P P +++ + S + W G N PIT++ I + W +E V G
Sbjct: 621 ARPNPPLDLELTGQLERSIELSWVPGEENNSPITNFVIEYEDGLHEPGVWHYQTE-VPGS 679
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
+++ L P+ Y F+VIA NE+G +PS PS QY T + P + PS +
Sbjct: 680 H---------TTVQLKLSPYVNYSFRVIAVNEIGRSQPSEPSEQYLTKSANPDENPSNVQ 730
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIP 354
G G + +L I+WE L + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 731 GIGSEPDNLVITWESLKGFQSNGPGLQYKVSWRQKDVDDEWTSVVV---ANVSKYIVSGT 787
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
F YE+KVQA+ND+G PE V S ED+P VAP V NST V W+P+
Sbjct: 788 PTF--VPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLAKVHWDPV 845
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS------RTTRNWALIVGLQPDTKYYVK 468
L +++RG L G+++ YWK + + ++ R + + ++ GL+P + Y +
Sbjct: 846 PL--KSVRGHLQGYKVYYWKVQSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPYSSYKLN 903
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V N GEGP S + +T P PPS + I NPT +T + SP+ +
Sbjct: 904 VRVVNGKGEGPASPDKVFKTPEGVPS-PPSFLKI--TNPTLDSLTLEWGSPTHPNGVLTS 960
Query: 529 YKVRVWEVD 537
Y ++ ++
Sbjct: 961 YILKFQPIN 969
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 243/629 (38%), Gaps = 92/629 (14%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
GE G T+ C PKP W +G I RK+ + ++ S V S +Y
Sbjct: 351 GEDG--TLICRANGNPKPSISWLTNGVPIAIAPEDPSRKV-DGDTIIFSAVQERSSAVYQ 407
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT- 118
C A+N +G + + VL PP+I A++ Q+ A + L+D AY +
Sbjct: 408 CNASNEYGYLLANAFVNVLAE-------PPRILTPANKLYQV--IADSPALIDCAYFGSP 458
Query: 119 ------HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
GV+ + NE + D G LEI A G Y CV ++ +GK +
Sbjct: 459 KPEIEWFRGVKGSILRGNEY----VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSA---------------TIQWTDGATNGRPITHYKIIA 217
+ V+ P + Q + +++ T+ W N P ++
Sbjct: 515 QLEVKDPTMIIKQPQYKVIQRSAQASFECVIKHDPTLIPTVIWLKD-NNELPDDERFLVG 573
Query: 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277
+ N T NV++ K+ YT ++++V ++ V+A P +P+
Sbjct: 574 KDNL--TIMNVTD----KDDGTYTCIVNTTLDSVS---ASAVLTVVAA-------PPTPA 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP----NIYYKIFWRKKNDT 333
Y P P + G + +SW +P E+ N+P I Y+ +
Sbjct: 618 IIYARP-----NPPLDLELTGQLERSIELSW--VPGEENNSPITNFVIEYEDGLHEPGVW 670
Query: 334 EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMP 390
+Q+E + V + + Y Y +V A+N++G P SE SA P
Sbjct: 671 HYQTEVPGSHTTVQLKLSP------YVNYSFRVIAVNEIGRSQPSEPSEQYLTKSAN--P 722
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT 450
P V G + +TW ++ + N G + +++ + ++D +E ++ +
Sbjct: 723 DENPSNVQGIGSEPDNLVITWESLKGFQSN--GPGLQYKVSWRQKDVDDEWTSVVVANVS 780
Query: 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510
+ ++ G Y +KV A N+ G PE + + P P V + IN T
Sbjct: 781 K--YIVSGTPTFVPYEIKVQALNDLGYAPEPSEVIGHSGEDLPMVAPGNVQVHVINSTLA 838
Query: 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV------GNTLDADIVDLSPG 564
V W V + GYKV W+V Q +SR + + GN + L P
Sbjct: 839 KVHWDPVPLKSVRGHLQGYKVYYWKV-QSLSRRSKRHVEKKILTFRGNKTFGMLPGLEPY 897
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
Y + V + G+G +SP F+ E
Sbjct: 898 SSYKLNVRVVNGKGEGP-ASPDKVFKTPE 925
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 124/557 (22%), Positives = 203/557 (36%), Gaps = 72/557 (12%)
Query: 6 GNVTIF-CNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
GNV + C P P W K+G + + R FEN L I VS DSG Y CTA
Sbjct: 261 GNVLLLECIAAGLPTPVIRWIKEGGELPAN--RTFFENFKKTLKIIDVSEADSGNYKCTA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ + L C A+ ++ W NGV
Sbjct: 319 RNTLGSTHHVISVTVKAAP-YWITAPRNLVLSPGEDGTLICRANGNPKPSIS--WLTNGV 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT--TVIVEGPP 180
I E P+ +DG + + + Y+C + G + V+ E P
Sbjct: 376 PIAIAP----EDPSRKVDGDTIIFSAVQERSSAVYQCNASNEYGYLLANAFVNVLAEPPR 431
Query: 181 GLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
L ++ +V S + D A G P + WF + I + + Y
Sbjct: 432 ILTPANKLYQVIADSPAL--IDCAYFGSPKPEIE----------WFRGVKGSILRG-NEY 478
Query: 241 TGRKEASIE-NVLVPWSTYEFKVIAGNELGYG------EPSSPSPQYNTPADKPYQAPSR 293
++E V ST + +A N+LG E P+ P K Q ++
Sbjct: 479 VFHDNGTLEIPVAQKDSTGTYTCVARNKLGKTQNEVQLEVKDPTMIIKQPQYKVIQRSAQ 538
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
S+E + + P + + W K N+ E + G + ++ +
Sbjct: 539 ------------ASFECVIKHD---PTLIPTVIWLKDNN-ELPDDERFLVGKDNLTIMNV 582
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV------APQGVFSRGFNSTAI 407
+ T + ++ V S V+T+ +A P + P + G +I
Sbjct: 583 TDKDDGTYTCIVNTTLDSVS---ASAVLTVVAAPPTPAIIYARPNPPLDLELTGQLERSI 639
Query: 408 NVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTT--RNWALIVGLQPDTKY 465
++W P E I +I + ED E V++ + + + L P Y
Sbjct: 640 ELSWVPGEENNSPITNFVIEY------EDGLHEPGVWHYQTEVPGSHTTVQLKLSPYVNY 693
Query: 466 YVKVMAYNNAGEGP---ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522
+V+A N G SE+YL ++ P + PS V G P + +TW +
Sbjct: 694 SFRVIAVNEIGRSQPSEPSEQYLTKSAN--PDENPSNVQGIGSEPDNLVITWESLKGFQS 751
Query: 523 EEPIIGYKVRVWEVDQD 539
P + YKV + D D
Sbjct: 752 NGPGLQYKVSWRQKDVD 768
>sp|O42414|NFASC_CHICK Neurofascin OS=Gallus gallus GN=NFASC PE=1 SV=1
Length = 1369
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 171/610 (28%), Positives = 273/610 (44%), Gaps = 66/610 (10%)
Query: 12 CNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69
C +P P W K+G N++ GG K ENG+L +S ++D GIY+C ATN+ G
Sbjct: 470 CPFFGSPIPTLRWFKNGQGNML-DGGNYKAHENGSLEMSMARKEDQGIYTCVATNILGKV 528
Query: 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNM 127
E++ RL V P+ + P + +L C + L + W + + IGN
Sbjct: 529 EAQVRLEV-KDPTRIVRGPEDQVVKRGSMPRLHCRVKHDPTLKLTVTWLKDDAPLYIGNR 587
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV----------- 176
E D GL I + D G+Y CV + + K S K + V
Sbjct: 588 MKKE--------DDGLT-IYGVAEKDQGDYTCVASTELDKDSAKAYLTVLAIPANRLRDL 638
Query: 177 -EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN--WNSTWFNVSEHVI 233
+ P P +++ ++ + S + W G N PIT Y + + TW N S
Sbjct: 639 PKERPDRPRDLELSDLAERSVKLTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHS---- 694
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
RY G +++ + L P+ Y+F+VIA N++G PS PS +Y T +P P+
Sbjct: 695 -----RYPGNVNSALLS-LSPYVNYQFRVIAVNDVGSSLPSMPSERYQTSGARPEINPTG 748
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVR 352
+ G G + ++ I+W PL + PN+ Y + WR+++ + +ET+K +V V
Sbjct: 749 VQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRDPRGSWYNETVKAPRHV---VWN 805
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P Y YE+KVQA ND G PE E +S ED P+ AP V R NSTAI +TW
Sbjct: 806 TP---IYVPYEIKVQAENDFGRAPEPETYIGYSGEDYPKAAPTDVRIRVLNSTAIALTWT 862
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYY 466
+ L + I+G+L +R +W++ + + R RN ++ L P + Y
Sbjct: 863 RVHL--DTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVSFPGDRNRGIVSRLFPYSNYK 920
Query: 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI 526
++++ N G+GP SE T P P + I+ N ++++ W + P +
Sbjct: 921 LEMVVTNGRGDGPRSEVKEFPTPEGVPSS-PRYLRIRQPNLESINLEWDH--PEHPNGVL 977
Query: 527 IGYKVR----VWEVDQDMSRANDTIIP--VGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY +R + S+ T++ N + P RY + A + GDG
Sbjct: 978 TGYNLRYQASCLSSPVNGSKTGRTLVENFSPNQTRFTVQRTDPISRYRFFLRARTQVGDG 1037
Query: 581 RM---SSPAI 587
+ SPA+
Sbjct: 1038 EVIVEESPAL 1047
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 8/179 (4%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++ + C P P +W K G + +G + N L IS VS +DSG Y C A+N
Sbjct: 279 GVDLLLECIASGVPAPDIMWYKKGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASN 338
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G + V P Y+ P + +A + +L C A+ + W NG I
Sbjct: 339 KMGSIRHTISVRVKAAP-YWLDEPQNLILAPGEDGRLVCRANGNPKPSIQ--WLVNGEPI 395
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGL 182
N P+ + G + + + Y+C + G + V +++ PP +
Sbjct: 396 EGSPPN----PSREVAGDTIVFRDTQIGSSAVYQCNASNEHGYLLANAFVSVLDVPPRI 450
>sp|O94856|NFASC_HUMAN Neurofascin OS=Homo sapiens GN=NFASC PE=1 SV=4
Length = 1347
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 60/549 (10%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y CV + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDANNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + +Y G +++ L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKYPGSVNSAVLR-LSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 GDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETREAWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED P+ AP V R NSTAI++
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKVRVMNSTAISL 844
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW------ALIVGLQPDT 463
WN + + ++G+L +R YW+E + + R ++ ++ L P +
Sbjct: 845 QWN--RVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVSRLFPYS 902
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y ++++ N G+GP SE T P P ++ N T+++ W + P
Sbjct: 903 NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSA-PRRFRVRQPNLETINLEWDH--PEHPN 959
Query: 524 EPIIGYKVR 532
+IGY ++
Sbjct: 960 GIMIGYTLK 968
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 138/646 (21%), Positives = 233/646 (36%), Gaps = 118/646 (18%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRML--SPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPP-------------GLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217
+ V+ P G ++ H S T+ W + P+ +
Sbjct: 515 RLEVKDPTRIYRMPEDQVARRGTTVQLECRVKHDPSLKLTVSWL---KDDEPLYIGNRMK 571
Query: 218 RTNWNSTWFNVSEH-------VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGY 270
+ + + T F V+E V E+D+ + + VL +T ++ A L
Sbjct: 572 KEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLT---VLADQATPTNRLAA---LPK 625
Query: 271 GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330
G P P T + + S+ +P + N+P Y + +
Sbjct: 626 GRPDRPRDLELT-----------------DLAERSVRLTWIPGDANNSPITDYVVQFE-- 666
Query: 331 NDTEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTI 383
+ +FQ ++ G+V AV+R+ Y Y+ +V AIN+VG P SE
Sbjct: 667 -EDQFQPGVWHDHSKYPGSVNSAVLRLSP---YVNYQFRVIAINEVGSSHPSLPSERYRT 722
Query: 384 FSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443
A P+ P V G + +TW P+ G ++Y + ET
Sbjct: 723 SGAP--PESNPGDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRE 774
Query: 444 YYLSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI 502
+ + T +VG P Y ++V A N+ G+GPE E + + P+ P+ V +
Sbjct: 775 AWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPESVIGYSGEDYPRAAPTEVKV 834
Query: 503 KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE---------VDQDMSRANDTIIPVGNT 553
+ +N T + + W V + + Y+ W V Q +A+ P G+
Sbjct: 835 RVMNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAS---FP-GDR 890
Query: 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKS 599
L + L P Y + ++ + GDG S E KEF +
Sbjct: 891 LRGVVSRLFPYSNYKLEMVVVNGRGDGPRS---------ETKEFTT 927
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>sp|Q05695|L1CAM_RAT Neural cell adhesion molecule L1 OS=Rattus norvegicus GN=L1cam PE=2
SV=3
Length = 1259
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 154/593 (25%), Positives = 269/593 (45%), Gaps = 42/593 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG+L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 497 QAANDQNNVTILANLQVKEATQITQG--PRSTIEKKGARVTFTCQASFDPSLQASITWRG 554
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL E ++ I+ G L I + ++D G+Y CV + + ++ ++ ++V G
Sbjct: 555 DG-----RDLQERGDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVG 609
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVI 233
PG +++ + H ++ + W+ + PI Y I + WF++ + V
Sbjct: 610 SPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VP 668
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
G + S L P+ Y F+V A N+ G GEPS S TP P + P
Sbjct: 669 GNQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVD 719
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRI 353
+ G G + ++ I+W+PL NAP I Y++ WR + ET KE V + +
Sbjct: 720 VRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLG----KQETWKEQ-TVSDPFLVV 774
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ + YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 775 SNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
+V A+N G GP SE + T P P A+H++ + T++ + W+ P +
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ--PPLSHNGVLT 948
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
GY + +D + + ++ +L+P +Y ++ A ++ G G
Sbjct: 949 GYLLSYHPLDGESKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTHQGPG 1001
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 140/599 (23%), Positives = 234/599 (39%), Gaps = 54/599 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G I + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGHLGIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRST-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L ++ +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGQLVIKSLDYSDQGDYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V T+ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPLGKQET---WKEQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLRGYN 848
Query: 531 VRVW------EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + + + ++P NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHVHKSHMVVP-ANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G ++ + C E P P W + + + R I++N N L + V +D G Y+
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPMPTD--RVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ Q P +L C +V W
Sbjct: 311 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEVT--WRI 367
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ I ++ ++ I+ G L ++N +D +C ++ G + + V
Sbjct: 368 NGMSIEKVNKDQ----KYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV 420
>sp|P97686|NRCAM_RAT Neuronal cell adhesion molecule OS=Rattus norvegicus GN=Nrcam PE=1
SV=2
Length = 1214
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 258/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 476 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 533
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + + P + + C + L +W + + N +
Sbjct: 534 AKNEVHLEI-KDPTRFIKQPGYAVVQRGSKVSFECKVKHDHTLIPTILWLKDNGELPNDE 592
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
++D L +++ D G Y C +T+ +S + V P
Sbjct: 593 -------RFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVSASAVLRVVAPTPTPAPIYD 645
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 646 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHEAGLWRHQAE------ 699
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P+ + G
Sbjct: 700 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSVPSEASEQYLTKAAEPDQNPTAVEG 755
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 756 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 812
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST W+P+
Sbjct: 813 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEAHWDPVP 870
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + ++ ++ GLQP + Y + V
Sbjct: 871 --PKSVRGHLQGYRIYYWKAQSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSHYVLNV 928
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 929 RVVNGKGEGPASADRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 985
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 986 ILKYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGSGSQITEEA 1044
Query: 587 IT 588
IT
Sbjct: 1045 IT 1046
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 131/618 (21%), Positives = 230/618 (37%), Gaps = 89/618 (14%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 375 GENGTLICRANGNPKPRISWLTNGVPVEIALDDPSRKI-DGDTIMFSNVQESSSAVYQCN 433
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 434 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 484
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 485 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 540
Query: 175 IVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH-YKIIARTNW--------N 222
++ P PG V K S + + H + +I W N
Sbjct: 541 EIKDPTRFIKQPGYAVVQRGSKVSFECK----------VKHDHTLIPTILWLKDNGELPN 590
Query: 223 STWFNVS-EHVIGKEVD-----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSP 276
F+V +H++ +V YT ++++V ++ +V+A +P
Sbjct: 591 DERFSVDKDHLVVSDVKDEDGGTYTCAANTTLDSVS---ASAVLRVVAPT-------PTP 640
Query: 277 SPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEF 335
+P Y+ P P + + ++W P + N+P + I + ++
Sbjct: 641 APIYDVP-----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHEAGL 693
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQV 392
+ G A +++ Y Y +V A N +G P SE +AE P
Sbjct: 694 WRHQAEVSGTQTTAQLKLSP---YVNYSFRVMAENSIGRSVPSEASEQYLTKAAE--PDQ 748
Query: 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452
P V G + +TW P+ + N G + +++ + ++D +E ++ ++
Sbjct: 749 NPTAVEGLGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK- 805
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
++ G Y +KV A N+ G PE + + P P V + +N T
Sbjct: 806 -YIVSGTPTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEA 864
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKR 566
W V P + GY++ W+ Q S+ N I G+ + L P
Sbjct: 865 HWDPVPPKSVRGHLQGYRIYYWKA-QSSSKRNRRHIEKKILTFQGSKTHGMLPGLQPYSH 923
Query: 567 YHMRVLAFSNGGDGRMSS 584
Y + V + G+G S+
Sbjct: 924 YVLNVRVVNGKGEGPASA 941
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 9/177 (5%)
Query: 5 GGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G +++ C E P P W K+DG + + + F+ L I VS DSG Y C A
Sbjct: 285 GNVLSLECIAEGLPTPVIYWIKEDGTLPVNRTFYRNFKK-TLQIIHVSEADSGNYQCIAK 343
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 344 NALGAVHHTISVTVKAAP-YWIVAPHNLVLSPGENGTLICRANGNPKPRIS--WLTNGVP 400
Query: 124 IGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
+ L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 401 VEIA----LDDPSRKIDGDTIMFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 453
>sp|P32004|L1CAM_HUMAN Neural cell adhesion molecule L1 OS=Homo sapiens GN=L1CAM PE=1 SV=2
Length = 1257
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/597 (25%), Positives = 259/597 (43%), Gaps = 50/597 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A +G + C AP P W +DG + R + NG L I + +D+G Y C
Sbjct: 438 AVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFC 497
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYIWTH 119
A N L V + P+ TI + C A + L + W
Sbjct: 498 LAANDQNNVTIMANLKVKDATQITQG--PRSTIEKKGSRVTFTCQASFDPSLQPSITWRG 555
Query: 120 NGVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G DL EL ++ I+ G L I + ++D G Y CV + + + ++ ++V G
Sbjct: 556 DG-----RDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVG 610
Query: 179 PPGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVS 229
PG + + ++H ++ + W+ + PI Y I +A W S
Sbjct: 611 SPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYS------ 664
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
+GK + S L P+ Y F+V A N+ G GEPS S TP P +
Sbjct: 665 ---LGK-----VPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEK 716
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P + G G + ++ I+W+PL NAP + Y++ WR + E + V
Sbjct: 717 NPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQI-----VSDP 771
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ + + + YE+KVQA+N G GPE +V +S ED PQ P+ NS+A+ V
Sbjct: 772 FLVVSNTSTFVPYEIKVQAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLV 831
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSR------TTRNWALIVGLQPDT 463
W P++L + ++G L G+ + YW+E + + + ++ + ++ GL+P +
Sbjct: 832 KWRPVDLAQ--VKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYS 889
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523
Y+++V A+N G GP SE + T P P A+H++ + T++ + W+ P
Sbjct: 890 SYHLEVQAFNGRGSGPASE-FTFSTPEGVPGH-PEALHLECQSNTSLLLRWQ--PPLSHN 945
Query: 524 EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
+ GY + +D+ + ++ DLSP RY ++ A + G G
Sbjct: 946 GVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPG 1002
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 144/632 (22%), Positives = 246/632 (38%), Gaps = 61/632 (9%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + G L++S V D+ + C
Sbjct: 345 GPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQC 404
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQ--------LRCSAHTEELLD 112
A N HG L++ + Y QLP KI A ++ L C A +
Sbjct: 405 EARNRHG-------LLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPS 457
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
V ++ +G + +E P N G L I + D G Y C+ + ++
Sbjct: 458 VQWL-DEDGTTVLQ---DERFFPYAN---GTLGIRDLQANDTGRYFCLAANDQNNVTIMA 510
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ + G + + K + + +T A+ + W ++ E
Sbjct: 511 NLKVKDATQITQGPRST-IEKKGSRVTFTCQASFDPSLQ-----PSITWRGDGRDLQE-- 562
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+G + D+Y + + L + +A EL E + +P P S
Sbjct: 563 LG-DSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVVESRAQLLVVGSPGPVPRLVLS 621
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVV 351
+ + +SW P E NAP Y I + K + +L K GN +
Sbjct: 622 DLHLL--TQSQVRVSWSPA--EDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTL 677
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
++ Y Y +V AIN GPG S V T+ + E P+ P V G +T + +T
Sbjct: 678 KLSP---YVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVKGEGNETTNMVIT 734
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKV 469
W P+ + N +++Y + P+ T + + + L+V Y +KV
Sbjct: 735 WKPLRWMDWN------APQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKV 788
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A N+ G+GPE + + + PQ P I+ +N + V V WR V + + + GY
Sbjct: 789 QAVNSQGKGPEPQVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGY 848
Query: 530 KVRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
V W + D ++ NT + L P YH+ V AF +GR S
Sbjct: 849 NVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAF----NGRGSG 904
Query: 585 PAITFQMGEEKEFKSGSPALY---SASTTLLL 613
PA F + AL+ ++T+LLL
Sbjct: 905 PASEFTFSTPEGVPGHPEALHLECQSNTSLLL 936
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G + + C E P P W + + + R ++N N L + V +D G Y
Sbjct: 254 ALQGQPLVLECIAEGFPTPTIKWLRPSGPMPAD--RVTYQNHNKTLQLLKVGEEDDGEYR 311
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ P +L C +V W
Sbjct: 312 CLAENSLGSARHAYYVTVEAAP-YWLHKPQSHLYGPGETARLDCQVQGRPQPEVT--WRI 368
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ + + ++ I G L ++N +D +C ++ G + + V
Sbjct: 369 NGIPVEELAKDQ----KYRIQRGALILSNVQPSDTMVTQCEARNRHGLLLANAYIYV 421
>sp|P11627|L1CAM_MOUSE Neural cell adhesion molecule L1 OS=Mus musculus GN=L1cam PE=1 SV=1
Length = 1260
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 243/528 (46%), Gaps = 40/528 (7%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSC 60
A EG + C AP P W ++G + R + NG L I + +D+G Y C
Sbjct: 437 AVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFC 496
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N L V + Q P + C A + L + W +
Sbjct: 497 QAANDQNNVTILANLQVKEA-TQITQGPRSAIEKKGARVTFTCQASFDPSLQASITWRGD 555
Query: 121 GVRIGNMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
G DL E ++ I+ G L I + ++D G Y CV + + ++ ++ ++V G
Sbjct: 556 G-----RDLQERGDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGS 610
Query: 180 PGLPGGVQVVEVH---KTSATIQWTDGATNGRPITHYKIIARTNWNS--TWFNVSEHVIG 234
PG +++ + H ++ + W+ + PI Y I + WF++ + V G
Sbjct: 611 PGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLGK-VPG 669
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ S L P+ Y F+V A N+ G GEPS S TP P + P +
Sbjct: 670 NQT---------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDV 720
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRI 353
G G + ++ I+W+PL NAP I Y++ WR + E ++ +T+ + VV
Sbjct: 721 RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWRKQTVSD----PFLVVSN 776
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
S F YE+KVQA+N+ G GPE +V +S ED PQV+P+ FNS+ + V W P
Sbjct: 777 TSTF--VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRP 834
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYV 467
++L + ++G L G+ + YW + + + + ++ ++ A++ GL+P + Y+V
Sbjct: 835 VDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHV 892
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWR 515
+V A+N G GP SE + T P P A+H++ + T++ + W+
Sbjct: 893 EVQAFNGRGLGPASE-WTFSTPEGVPGH-PEALHLECQSDTSLLLHWQ 938
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 138/598 (23%), Positives = 231/598 (38%), Gaps = 52/598 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENGNLLISPVSRDDSGIYSC 60
G G + C + P+P+ W+ +G + + + + + E G+L++S V D+ + C
Sbjct: 344 GPGETARLDCQVQGRPQPEITWRINGMSMETVNKDQKYRIEQGSLILSNVQPTDTMVTQC 403
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120
A N HG L++ + Y QLP +I + + T LL A+
Sbjct: 404 EARNQHG-------LLLANAYIYVVQLPARI-LTKDNQTYMAVEGSTAYLLCKAF----- 450
Query: 121 GVRIGNMDLNELETPNINID-------GGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
G + ++ + E + D G L I + D G Y C + ++
Sbjct: 451 GAPVPSVQWLDEEGTTVLQDERFFPYANGTLSIRDLQANDTGRYFCQAANDQNNVTILAN 510
Query: 174 VIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233
+ V+ + G + + K A + +T A+ + A W ++ E
Sbjct: 511 LQVKEATQITQGPRSA-IEKKGARVTFTCQASFDPSLQ-----ASITWRGDGRDLQER-- 562
Query: 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
+ D+Y + L + +A EL E + +P P+ S
Sbjct: 563 -GDSDKYFIEDGKLVIQSLDYSDQGNYSCVASTELDEVESRAQLLVVGSPGPVPHLELS- 620
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVR 352
K + +SW P E N+P Y I + K + +L K GN ++
Sbjct: 621 -DRHLLKQSQVHLSWSPA--EDHNSPIEKYDIEFEDKEMAPEKWFSLGKVPGNQTSTTLK 677
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVV-TIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ Y Y +V AIN GPG S V ++ + E P+ P V G + + +TW
Sbjct: 678 LSP---YVHYTFRVTAINKYGPGEPSPVSESVVTPEAAPEKNPVDVRGEGNETNNMVITW 734
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQPDTKYYVKVM 470
P+ + N I +R++ W+ +ET + +T + L+V Y +KV
Sbjct: 735 KPLRWMDWN--APQIQYRVQ-WRPQGKQET---WRKQTVSDPFLVVSNTSTFVPYEIKVQ 788
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
A NN G+GPE + + + PQ P I N +TV V WR V + + + GY
Sbjct: 789 AVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQVKGHLKGYN 848
Query: 531 VRVWEVDQDMSRAN-----DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
V W + I+ NT A + L P YH+ V AF+ G G S
Sbjct: 849 VTYWWKGSQRKHSKRHIHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGRGLGPAS 906
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 11/177 (6%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYS 59
A +G ++ + C E P P W + + + R I++N N L + V +D G Y+
Sbjct: 253 ALQGQSLILECIAEGFPTPTIKWLHPSDPMPTD--RVIYQNHNKTLQLLNVGEEDDGEYT 310
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + V P Y+ Q P +L C ++ W
Sbjct: 311 CLAENSLGSARHAYYVTVEAAP-YWLQKPQSHLYGPGETARLDCQVQGRPQPEIT--WRI 367
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
NG+ + ++ ++ I+ G L ++N D +C ++ G + + V
Sbjct: 368 NGMSMETVNKDQ----KYRIEQGSLILSNVQPTDTMVTQCEARNQHGLLLANAYIYV 420
>sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2 PE=2 SV=2
Length = 2177
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 259/596 (43%), Gaps = 36/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LL+SP D+G Y+
Sbjct: 420 DGMSVILNCETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPAHLTDAGTYT 479
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + P ++ + C + +DV YIW
Sbjct: 480 CLATNSRGVDEASADLVVW-ARTRITDPPQDQSVIKGTKASMSCGVTHDPSVDVRYIWEK 538
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P + +D G L I+ D G Y C V S G S + V
Sbjct: 539 DGAPLGTES-----GPRLRLDETGTLHISQTWSGDIGTYTCKVLSAGGNDSRSAHLRVRQ 593
Query: 179 PPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P V + K + + W P+ Y + N N+ W V + E
Sbjct: 594 LPHAPESPVAVLSPLEKRAINLTWAKPFDGNSPLLRYLVEISEN-NAPW-TVLLASVDPE 651
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ R LVP +Y+F++ A N++G + S + + + P + P+ P +
Sbjct: 652 LTWVVVRG-------LVPARSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPFAPPQNVIA 704
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPS 355
G + I W+P P QN Y I + +Q K N + + +
Sbjct: 705 SGRTNQSIMIQWQPPPESHQNGVLKGYIIRYCLAGLPVGYQ---FKNITNADVNNLLLED 761
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
+T YE++V A N G G S VT ++ + +P V P V + NST I TWNP
Sbjct: 762 LIIWTNYEIEVAAYNSAGLGVYSMKVTEWTLQGVPTVPPGNVQTEATNSTTIRFTWNPPS 821
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAY 472
+ I G G+++ W+ ++ EE V + + + + +VGL+ T+Y V+ +
Sbjct: 822 --PQFINGINQGYKLIAWEPEHEEEATVVTVRPNFQDSVHVGYVVGLKKFTEYLTSVLCF 879
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT+ P P + I T++ V+W+ P + + GY++
Sbjct: 880 TTPGDGPRSPPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPLEKNGILTGYRIS 936
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
E ++ +R + V TL+ + L+ Y + V A ++ G G++SS I+
Sbjct: 937 WEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSSSTIS 990
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 186/432 (43%), Gaps = 53/432 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P V+ +V S + W G+ P+ Y + R + W ++S +
Sbjct: 1407 PPSKPL-VRQEDVRARSVLLSWEPGSDGLSPVRFYTVQTRELPSGEWALHPASISHNATA 1465
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1466 FVVDR------------LKPFTSYKFRVKATNDIGDSEYSEESESLTTLQAAPEEAPTIL 1513
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG------- 347
+ I W+P +K N + +++ +R+ + TL GN G
Sbjct: 1514 SVTPHTTTSVLIRWQPPSEDKINGILLGFRLRYRELLYDSLRGFTLHGIGNPGATWAELT 1573
Query: 348 -IAVVRIPSEFYYTEYE-----------VKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
+ V SE T+YE +++ N VG GP S +F E MP APQ
Sbjct: 1574 PVYAVHNLSEVSLTQYELDNLSKHRRYEIRMSVYNAVGEGPPSPPQEVFVGEAMPTGAPQ 1633
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYYLSRTTRN 452
V + +T ++VTW P +N G + G++I +W+ E+A +L T
Sbjct: 1634 NVAVKAATATQLDVTWEPPPTESQN--GDIQGYKIHFWEAQRQNESARVKTLFLPETGVK 1691
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y+V + A+N AG+GP S RT + AP P ++ + T+V+V
Sbjct: 1692 LKNLTGY---TSYWVSIAAFNAAGDGPRSTPVTARTQQAAPSA-PGSIRFSELTTTSVNV 1747
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W P + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1748 SWE--PPPLPNGILEGYRL-VYEPCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRF 1804
Query: 570 RVLA--FSNGGD 579
R+ A F+ G D
Sbjct: 1805 RIRAKTFAYGPD 1816
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 177/426 (41%), Gaps = 40/426 (9%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + E+ TS + W + +T Y+I + +N T V+ ++
Sbjct: 897 EDVPGPVGHLSFSEILDTSLKVSWQEPLEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 955
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ SS + P + P AP+ +G
Sbjct: 956 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSSSTISSGVPPELP-GAPTNLG 1005
Query: 296 GGG------------GKIGDLSIS-WEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE 342
G G SIS W+ + QN + + + N+ + +S
Sbjct: 1006 ISNIGPRSVTLQFRPGYDGKTSISRWQVEAQVGQNGEAEEWGLVHQLANEPDARS----- 1060
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRG 401
+ +P+ YT Y +++ +N VG P S I + + P VAP V R
Sbjct: 1061 --------LEVPNLNPYTYYSFRMRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANVTLRT 1112
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
+ T++ + W P+ N +G+RI+Y + D V+ + I L+
Sbjct: 1113 ASETSLWLRWMPLLEQEYNGNPDSVGYRIRYLRSDGQGRAVVHVIHDRVEREYTIEDLEE 1172
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
T+Y V+V A+N G GP S L RT P PS V + + + + V W + +
Sbjct: 1173 WTEYRVQVQAFNAIGSGPWSHLVLGRTRESVPSSGPSNVSAQATSSSNMLVRWSDIPEAD 1232
Query: 522 EEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581
I+GYKV E D + +RA + + A + L Y +RVLAF+ GDG
Sbjct: 1233 CNGLILGYKVMFKEKDSE-ARAQFWLAEGNTSRSAQLTGLGKFMLYEIRVLAFTRIGDGV 1291
Query: 582 MSSPAI 587
S P I
Sbjct: 1292 PSRPPI 1297
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 37/461 (8%)
Query: 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-PGGV 186
D LE PN+N T SF +V ++ + ++ ++ PP + P V
Sbjct: 1057 DARSLEVPNLN------PYTYYSFR--MRQVNIVGTSPPSLPSRRIQTLQAPPDVAPANV 1108
Query: 187 QVVEVHKTSATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEVDRYTG 242
+ +TS ++W + NG P + Y+I R + HVI V+R
Sbjct: 1109 TLRTASETSLWLRWMPLLEQEYNGNPDSVGYRI--RYLRSDGQGRAVVHVIHDRVER--- 1163
Query: 243 RKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302
E +IE+ L W+ Y +V A N +G G P S T P PS +
Sbjct: 1164 --EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSHLVLGRTRESVPSSGPSNVSAQATSSS 1219
Query: 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362
++ + W +P N + YK+ +++K D+E +++ GN + ++ + Y
Sbjct: 1220 NMLVRWSDIPEADCNGLILGYKVMFKEK-DSEARAQFWLAEGNTSRSA-QLTGLGKFMLY 1277
Query: 363 EVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENI 421
E++V A +G G P + + +D+P P G+ +T++ + W P I
Sbjct: 1278 EIRVLAFTRIGDGVPSRPPILERTLDDVPG-PPVGMLFPEVRTTSVRLIWQPPTAPNGII 1336
Query: 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPES 481
+ HR+ L +TR + GLQP+ Y + A G G +
Sbjct: 1337 LAYQLTHRLN---TTTANAAVSEVLGPSTRQYT-ATGLQPEATYLFSITAQTRKGWGEAA 1392
Query: 482 ERYLERTYRKAPQKPPSA--VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539
E + T ++ +PPS V + + +V ++W S P+ Y V+ E+
Sbjct: 1393 EALVVTTEKRDRPQPPSKPLVRQEDVRARSVLLSWEPGSDGL--SPVRFYTVQTRELPSG 1450
Query: 540 MSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
+ I + A +VD L P Y RV A ++ GD
Sbjct: 1451 EWALHPASI--SHNATAFVVDRLKPFTSYKFRVKATNDIGD 1489
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 136/350 (38%), Gaps = 28/350 (8%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PS P + A P AP + L ++WEP P E QN
Sbjct: 1600 YEIRMSVYNAVGEGPPSPPQEVFVGEA-MPTGAPQNVAVKAATATQLDVTWEPPPTESQN 1658
Query: 318 APNIYYKI-FW---RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG 373
YKI FW R+ ++ L E G V++ + YT Y V + A N G
Sbjct: 1659 GDIQGYKIHFWEAQRQNESARVKTLFLPETG------VKLKNLTGYTSYWVSIAAFNAAG 1712
Query: 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY- 432
GP S VT + + P AP + +T++NV+W P L G L G+R+ Y
Sbjct: 1713 DGPRSTPVTARTQQAAPS-APGSIRFSELTTTSVNVSWEPPPLPN----GILEGYRLVYE 1767
Query: 433 --WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490
D + + + W + L Y ++ A A GP+ E +
Sbjct: 1768 PCMPVDGVSKIVTVDVKGNSPLWMKVKDLAEGITYRFRIRAKTFA-YGPDVEANITTGPG 1826
Query: 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP- 549
+ PP I + + + W P + PI Y + D+ + IP
Sbjct: 1827 EGAPGPPGEPFISRYG-SAITIHWTSGDPG--QGPITRYVIEARPSDEGLWDILIKDIPK 1883
Query: 550 --VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
T DI L G Y RV+A ++ G G S+P+ + + F
Sbjct: 1884 EVTSYTFSMDI--LKQGVSYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++I R ++ +G+L IS + DD+G++ C A N
Sbjct: 331 VAIPCQAKGVPPPDMAWYKDASLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNA 390
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 391 AGEVQTTTYLAVTSIAPNITRGPQDSTVIDGMSVILNC--ETSGAPRPAITW-QKGERI- 446
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L ++ A DAG Y C+ ++ G ++V
Sbjct: 447 -LASGSVQLPRFTLLESGSLLVSPAHLTDAGTYTCLATNSRGVDEASADLVV 497
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 189 VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASI 248
+ + ++ TI WT G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1838 ISRYGSAITIHWTSGDPGQGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMDILK 1896
Query: 249 ENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ V +Y+F+VIA N+ GYG PS+PSP + P+
Sbjct: 1897 QGV-----SYDFRVIAVNDYGYGTPSTPSPSVSAQKANPF 1931
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 137/633 (21%), Positives = 230/633 (36%), Gaps = 109/633 (17%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 132 GEAAVIRAPRIASFPQPQVTWFRDGRKISPSSRIAITLENTLVILSTVAPDAGRYYVQAV 191
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQ----LPPKIT--IAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ +PP+ T +A + + C A+ L+
Sbjct: 192 NDKNGDNKTSQPITLTVANVGGPADPIAPTIIVPPRNTSVVAGTSEVTMECVANARPLIK 251
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV I + I+ L I N + D+G YEC + S+V ++
Sbjct: 252 LHIIWKKDGVPISS---------GISDYSRRLTILNPTLGDSGYYECEAVLRSSSVPAVA 302
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + + + + W+ +
Sbjct: 303 EGAYLSVLEPPQF---VKEPERHITAEMEKVVAIPCQAKGVPPPDM--------AWYKDA 351
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG------YGEPSSPSPQYNT 282
+ +++ R+ + S++ + L+P T F+ A N G Y +S +P
Sbjct: 352 SLIHPEQLSRFQLLADGSLQISGLLPDDTGMFQCFARNAAGEVQTTTYLAVTSIAPNITR 411
Query: 283 -PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK------KNDTEF 335
P D S + G I + S P P I W+K +
Sbjct: 412 GPQD------STVIDGMSVILNCETSGAPRP-----------AITWQKGERILASGSVQL 454
Query: 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS---AEDMPQV 392
TL E G++ ++ + YT A N G S + +++ D PQ
Sbjct: 455 PRFTLLESGSLLVSPAHLTDAGTYT-----CLATNSRGVDEASADLVVWARTRITDPPQ- 508
Query: 393 APQGVFSRGFNSTAINVTWNP---IELIRENIRGRL---IGHRIKYWKEDNPEETAVYYL 446
Q V S + VT +P + I E L G R++ +ET ++
Sbjct: 509 -DQSVIKGTKASMSCGVTHDPSVDVRYIWEKDGAPLGTESGPRLRL------DETGTLHI 561
Query: 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG-I 505
S+T W+ +G Y KV++ G R R+ P P S V + +
Sbjct: 562 SQT---WSGDIG-----TYTCKVLS-----AGGNDSRSAHLRVRQLPHAPESPVAVLSPL 608
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPG 564
+++TW P P++ Y V E+ ++ + + V L +V L P
Sbjct: 609 EKRAINLTW--AKPFDGNSPLLRYLV---EISENNAPWTVLLASVDPELTWVVVRGLVPA 663
Query: 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEF 597
+ Y R+ A ++ G + S + EE F
Sbjct: 664 RSYQFRLCAVNDVGRSQFSKDTERVSLPEEPPF 696
>sp|Q810U4|NRCAM_MOUSE Neuronal cell adhesion molecule OS=Mus musculus GN=Nrcam PE=1 SV=2
Length = 1256
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 162/602 (26%), Positives = 255/602 (42%), Gaps = 56/602 (9%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K GS I+ +NG L I +D +G Y+C A N GM
Sbjct: 470 CAFFGSPMPTIEWFKGTK--GSALHEDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGM 527
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128
+++ L + P+ + P + + C + L +W + + N +
Sbjct: 528 AKNEVHLEI-KDPTRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDE 586
Query: 129 LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP--------- 179
+ D L +++ D G Y C +T+ S + V P
Sbjct: 587 -------RFSTDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPTPTPAPIYD 639
Query: 180 -PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKE 236
P P +++ S + WT G N PIT + I + W + +E
Sbjct: 640 VPNPPFDLELTNQLDKSVQLTWTPGDDNNSPITKFIIEYEDAMHDAGLWRHQAE------ 693
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
+ + + L P+ Y F+V+A N +G PS S QY T A +P Q P + G
Sbjct: 694 ----VSGTQTTAQLKLSPYVNYSFRVMAENSIGRSMPSEASEQYLTKAAEPDQNPMAVEG 749
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPS 355
G + +L I+W+PL + N P + YK+ WR+K+ D E+ S + NV +V
Sbjct: 750 LGTEPDNLVITWKPLNGFQSNGPGLQYKVSWRQKDGDDEWTSVVV---ANVSKYIVSGTP 806
Query: 356 EFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
F Y +KVQA+NDVG PE V S ED+P VAP V NST V W+P+
Sbjct: 807 TF--VPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVP 864
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT------TRNWALIVGLQPDTKYYVKV 469
+++RG L G+RI YWK + + ++ + T+ ++ GLQP + Y + V
Sbjct: 865 --PKSVRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNV 922
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
N GEGP S T P P S +K +NPT +T + PS + Y
Sbjct: 923 RVVNGKGEGPASTDRGFHTPEGVPSAPSS---LKIVNPTLDSLTLEWDPPSHPNGILTEY 979
Query: 530 KVRVWEVD--QDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG-RMSSPA 586
++ ++ ++ D IP N + +L+ RY A ++ G G +++ A
Sbjct: 980 ILQYQPINSTHELGPLVDLKIP-ANKTRWTLKNLNFSTRYKFYFYAQTSVGPGSQITEEA 1038
Query: 587 IT 588
IT
Sbjct: 1039 IT 1040
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 126/611 (20%), Positives = 227/611 (37%), Gaps = 75/611 (12%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDG---NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G N T+ C PKP+ W +G I RKI + ++ S V S +Y C
Sbjct: 369 GENGTLICRANGNPKPRISWLTNGVPIEIALDDPSRKI-DGDTIIFSNVQESSSAVYQCN 427
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--- 118
A+N +G + + VL PP+I +A N + A+ LLD A+ +
Sbjct: 428 ASNKYGYLLANAFVNVLAE-------PPRILTSA--NTLYQVIANRPALLDCAFFGSPMP 478
Query: 119 ----HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174
G + + E + D G LEI A G Y CV ++ +G + +
Sbjct: 479 TIEWFKGTKGSALH----EDIYVLHDNGTLEIPVAQKDSTGTYTCVARNKLGMAKNEVHL 534
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW--------NSTWF 226
++ P ++++ + + + + + R + +I W N F
Sbjct: 535 EIKDP------TRIIKQPEYAVVQRGSKVSFECRVKHDHTLIPTIMWLKDNGELPNDERF 588
Query: 227 NVS-EHVIGKEVDRYTGRKEASIENVLVPWSTYE--FKVIAGNELGYGEPSSPSPQYNTP 283
+ +H++ +V G N + ++ +V+A +P+P Y+ P
Sbjct: 589 STDKDHLVVSDVKDDDGGTYTCTANTTLDSASASAVLRVVAPT-------PTPAPIYDVP 641
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK-NDTEFQSETLKE 342
P + + ++W P + N+P + I + +D +
Sbjct: 642 -----NPPFDLELTNQLDKSVQLTW--TPGDDNNSPITKFIIEYEDAMHDAGLWRHQAEV 694
Query: 343 YGNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFSAEDMPQVAPQGVFS 399
G A +++ Y Y +V A N +G P SE +AE P P V
Sbjct: 695 SGTQTTAQLKLSP---YVNYSFRVMAENSIGRSMPSEASEQYLTKAAE--PDQNPMAVEG 749
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
G + +TW P+ + N G + +++ + ++D +E ++ ++ ++ G
Sbjct: 750 LGTEPDNLVITWKPLNGFQSN--GPGLQYKVSWRQKDGDDEWTSVVVANVSK--YIVSGT 805
Query: 460 QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSP 519
Y +KV A N+ G PE + + P P V + +N T V W V P
Sbjct: 806 PTFVPYLIKVQALNDVGFAPEPAAVMGHSGEDLPMVAPGNVRVSVVNSTLAEVHWDPVPP 865
Query: 520 SFEEEPIIGYKVRVWEVDQDMSRANDTIIP------VGNTLDADIVDLSPGKRYHMRVLA 573
+ GY++ W+ Q S+ N I G + L P Y + V
Sbjct: 866 KSVRGHLQGYRIYYWKT-QSSSKRNRRHIEKKILTFQGTKTHGMLPGLQPYSHYALNVRV 924
Query: 574 FSNGGDGRMSS 584
+ G+G S+
Sbjct: 925 VNGKGEGPAST 935
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 11/178 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTA 62
G +++ C E P P W K+ ++ + R + N L I+ VS DSG Y C A
Sbjct: 279 GNVLSLECIAEGLPTPIIYWIKEDGMLPAN--RTFYRNFKKTLQITHVSEADSGNYQCIA 336
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
N G + V P Y+ P + ++ N L C A+ ++ W NGV
Sbjct: 337 KNALGAVHHTISVTVKAAP-YWIVAPQNLVLSPGENGTLICRANGNPKPRIS--WLTNGV 393
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180
I L+ P+ IDG + +N + + Y+C + G + V V P
Sbjct: 394 PIEIA----LDDPSRKIDGDTIIFSNVQESSSAVYQCNASNKYGYLLANAFVNVLAEP 447
>sp|Q98902|L1CAM_TAKRU Neural cell adhesion molecule L1 OS=Takifugu rubripes GN=l1cam PE=3
SV=1
Length = 1277
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 155/595 (26%), Positives = 252/595 (42%), Gaps = 52/595 (8%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSC-- 60
EG + C +PKPK W+ +++ + R + NG L I+ VS DD GIY+C
Sbjct: 457 EGQKALLECETFGSPKPKVTWESSSISLLLADPRVNLLTNGGLEIANVSHDDEGIYTCLV 516
Query: 61 --TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-W 117
+ +V+ E R ++L P P K I C T+ L + W
Sbjct: 517 QGSNISVNAEVEVLNRTVILSPPQALRLQPGKTAI-------FTCLYVTDPKLSSPLLQW 569
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
N +I ++ T DG L I+N D G Y C + + + + +T+ +
Sbjct: 570 RKNDQKIFESHSDKKYT----FDGPGLIISNVEPGDEGVYTCQIITKLDMVEASSTLTLC 625
Query: 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKI------IARTNWNSTWFNVSEH 231
P P +QV T+ WT G N PI Y + + W
Sbjct: 626 DRPDPPVHLQVTNAKHRVVTLNWTPGDDNNSPILEYVVEFEDQDMKENGW---------- 675
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+E+ R K+ + L P+ +Y F+VIA N+ G +PS S Y TPAD P P
Sbjct: 676 ---EELKRVAADKK-HVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPDSNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
+ L I+WE + + N P+ Y + WR+ + + +EY +V
Sbjct: 732 EDVRSESTDPDTLVITWEEMDKRNFNGPDFKYLVMWRRVVGS--GPDWHEEYTIAPPFIV 789
Query: 352 RIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
F + +E+KVQA+N G GPE + + +S ED+P AP + NST I VTW
Sbjct: 790 TDVQNF--SAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENSTTIRVTW 847
Query: 412 NPIELIRENIRGRLIGHRI----KYWKEDNPEETAVYYLSRTTRN--WALIVGLQPDTKY 465
+ ++ +E +RG L+G++I + + +E + +T N I L+P Y
Sbjct: 848 SAVD--KETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRPYCHY 905
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
+ + A+N+ GEGP SE+ T P P S ++ +P+ +T + PS
Sbjct: 906 DLAISAFNSKGEGPLSEKTSFMTPEGVPGPPMS---MQMTSPSESEITLHWTPPSKPNGI 962
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDG 580
++GY ++ ++ D + I + L Y ++A + G G
Sbjct: 963 LLGYSLQYRKMQSDDNPLQVVDIASPEITHLTLKGLDRHSHYQFLLMARTAAGKG 1017
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 142/620 (22%), Positives = 242/620 (39%), Gaps = 102/620 (16%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG---RRKIFENGNLLISPVSRDDSGIYSCT 61
G V + C + P P W +G + + RR + E+G+L++ V D+ IY C
Sbjct: 363 GETVKLDCQADGIPSPTITWTVNGVPLSATSLEPRRSLTESGSLILKDVIFGDTAIYQCQ 422
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDV 113
A+N HG I+ + Y +LPP+I T + L C V
Sbjct: 423 ASNKHGT-------ILANTNVYVIELPPQILTENGNTYTFVEGQKALLECETFGSPKPKV 475
Query: 114 AYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W + + + L P +N+ G LEI N S D G Y C+V+ + ++ +
Sbjct: 476 T--WESSSISL------LLADPRVNLLTNGGLEIANVSHDDEGIYTCLVQGSNISVNAEV 527
Query: 173 -----TVIVEGPPGL---PG------GVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218
TVI+ P L PG + V + +S +QW N + I +
Sbjct: 528 EVLNRTVILSPPQALRLQPGKTAIFTCLYVTDPKLSSPLLQWRK---NDQKIFESHSDKK 584
Query: 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP 278
++ +S G E Y ++I +L E SS
Sbjct: 585 YTFDGPGLIISNVEPGDE-------------------GVYTCQIIT--KLDMVEASSTL- 622
Query: 279 QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE 338
T D+P P + K ++++W P + N+P + Y + EF+ +
Sbjct: 623 ---TLCDRP-DPPVHLQVTNAKHRVVTLNW--TPGDDNNSPILEYVV--------EFEDQ 668
Query: 339 TLKEYGNVGIAVVRIPSEFY------YTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQ 391
+KE G + V + Y Y +V AIND G S++ ++ + D P
Sbjct: 669 DMKENGWEELKRVAADKKHVNLPLWPYMSYRFRVIAINDQGKSDPSKLSDLYKTPADAPD 728
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAVYYLSR 448
P+ V S + + +TW E+ + N G + + W+ P+ Y ++
Sbjct: 729 SNPEDVRSESTDPDTLVITWE--EMDKRNFNGPDFKYLV-MWRRVVGSGPDWHEEYTIAP 785
Query: 449 TTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPT 508
++ +Q + + +KV A N G GPE + + + P + P + + N T
Sbjct: 786 P----FIVTDVQNFSAFEIKVQAVNKKGLGPEPDPIIGYSGEDVPLEAPLNLGVLLENST 841
Query: 509 TVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA----NDTIIPVG-NTLDADIVDLSP 563
T+ VTW V ++GYK+ + SRA N ++ G N I +L P
Sbjct: 842 TIRVTWSAVDKETVRGHLLGYKIYLTWGHHRNSRAQEPENIVMVQTGANEEKKSITNLRP 901
Query: 564 GKRYHMRVLAFSNGGDGRMS 583
Y + + AF++ G+G +S
Sbjct: 902 YCHYDLAISAFNSKGEGPLS 921
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 1 YAGEGGNVTIFCNPEAAPKPKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYS 59
+A G + + C + P PK W +KDG + S + +F+ L + +S D G Y
Sbjct: 269 HALRGQTLELECIVQGLPTPKVSWLRKDGEMSESRISKDMFDR-RLQFTNISESDGGEYQ 327
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
CTA NV G + V P Y+ P A ++L C A + + WT
Sbjct: 328 CTAENVQGRTFHTYTVTVEASP-YWTNAPVSQLYAPGETVKLDCQA--DGIPSPTITWTV 384
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEG 178
NGV + LE + G L + + F D Y+C + G I T V ++E
Sbjct: 385 NGVPLS---ATSLEPRRSLTESGSLILKDVIFGDTAIYQCQASNKHGTILANTNVYVIEL 441
Query: 179 PPGL 182
PP +
Sbjct: 442 PPQI 445
>sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens GN=SDK2 PE=1 SV=3
Length = 2172
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 262/598 (43%), Gaps = 40/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R E+G+LLISP D+G Y+
Sbjct: 415 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGTYT 474
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + + YIW
Sbjct: 475 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTIRYIWEK 533
Query: 120 NGVRIGNMDLNELETPNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+G +G P I +D G L I+ D G Y C V S G S + V
Sbjct: 534 DGATLGTES-----HPRIRLDRNGSLHISQTWSGDIGTYTCRVISAGGNDSRSAHLRVRQ 588
Query: 179 PPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
P P + V + + + WT P+ Y I+ + N+ W V+
Sbjct: 589 LPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRY-ILEMSENNAPW-----TVLLAS 642
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
VD + + LVP +Y+F++ A N++G G+ S + + + P + P P +
Sbjct: 643 VD---PKATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIA 699
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAVVRI 353
G + I W+P P QN Y I + +F++ T + N+ + + I
Sbjct: 700 SGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLII 759
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+T YE++V A N G G S VT ++ + +P V P V + NST I TWN
Sbjct: 760 -----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFTWNA 814
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVM 470
+ I G G+++ W+ + EE + + + + + GL+ T+Y+ V+
Sbjct: 815 PS--PQFINGINQGYKLIAWEPEQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFTSVL 872
Query: 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYK 530
+ G+GP S L RT+ P P + I T++ V+W+ P + + GY+
Sbjct: 873 CFTTPGDGPRSTPQLVRTHEDVP-GPVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYR 929
Query: 531 VRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
+ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I+
Sbjct: 930 ISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTIS 985
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 183/424 (43%), Gaps = 51/424 (12%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1402 PPSRPM-VQQEDVRARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASS 1460
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1461 FIVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1508
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1509 SVTPHTTTSVLIRWQPPAEDKINGILLGFRIRYRELLYEGLRGFTLRGINNPGATWAELT 1568
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P AP+
Sbjct: 1569 SMYSMRNLSRPSLTQYELDNLNKHRRYEIRMSVYNAVGEGPSSPPQEVFVGEAVPTAAPR 1628
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRN 452
V G +T ++VTW P L +N G + G++I +W+ E +L+ +
Sbjct: 1629 NVVVHGATATQLDVTWEPPPLDSQN--GDIQGYKIYFWEAQRGNLTERVKTLFLAENSVK 1686
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP PS+V + T+V+V
Sbjct: 1687 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTQGQTQQAAPSA-PSSVKFSELTTTSVNV 1742
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND--TIIPVGNT-LDADIVDLSPGKRYHM 569
+W +P F + GY++ V+E + + T+ GN+ L + DL+ G Y
Sbjct: 1743 SWE--APQFPNGILEGYRL-VYEPCSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRF 1799
Query: 570 RVLA 573
R+ A
Sbjct: 1800 RIRA 1803
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPG---GVQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 947 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGPPTNLGISN 1003
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + H + E D +
Sbjct: 1004 IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI--HQLSNEPDA----RSME 1057
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1058 VPD-LNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWLR 1116
Query: 308 WEPLPREKQNA--PNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------Y 359
W PLP + N ++ YKI K + ++ +TL + R+ ++ +
Sbjct: 1117 WMPLPEMEYNGNPESVGYKI---KYSRSDGHGKTLSH-----VVQDRVERDYTIEDLEEW 1168
Query: 360 TEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE 419
TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ E+
Sbjct: 1169 TEYRVQVQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWS--EVPEA 1226
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG- 478
+ G ++G+++ Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1227 DRNGLVLGYKVMYKEKDSDTQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGS 1286
Query: 479 PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1287 PSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI 1336
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ +P +T Y +++ +N VG P S+ I + + P +AP V R + T++ +
Sbjct: 1056 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVSLRTASETSLWL 1115
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS-RTTRNWALIVGLQPDTKYYVK 468
W P+ + N +G++IKY + D +T + + R R++ I L+ T+Y V+
Sbjct: 1116 RWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLSHVVQDRVERDYT-IEDLEEWTEYRVQ 1174
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
V A+N G GP S+ + RT P P+ V +++ V W V + ++G
Sbjct: 1175 VQAFNAIGSGPWSQTVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEVPEADRNGLVLG 1234
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YKV E D D ++ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1235 YKVMYKEKDSD-TQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1292
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI +R++ + +
Sbjct: 1092 LQAPPDMAPANVSLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYSRSDGHGKTLS-- 1149
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
HV+ V+R + +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1150 -HVVQDRVER-----DYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQTVVGRTRESVPSS 1201
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1202 GPTNVSALATTSSSMLVRWSEVPEADRNGLVLGYKVMYKEK-DSDTQPRFWLVEGNSSRS 1260
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1261 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1318
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ V L+ + R + GL+P++ Y +
Sbjct: 1319 LIWQPPAAPNGIILAYQITHRL---NTTTANTATVEVLAPSARQYT-ATGLKPESVYLFR 1374
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1375 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSRPMVQQEDVRARSVLLSWEPGSDGL--SPV 1432
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + + IVD L P Y RV A ++ GD
Sbjct: 1433 RYYTIQTRELPS--GRWALHSASVSHNASSFIVDRLKPFTSYKFRVKATNDIGD 1484
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G PSSP + P AP + G L ++WEP P + QN
Sbjct: 1595 YEIRMSVYNAVGEG-PSSPPQEVFVGEAVPTAAPRNVVVHGATATQLDVTWEPPPLDSQN 1653
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW ++ N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1654 GDIQGYKIYFWEAQRGNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1708
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W + G L G+R+ Y
Sbjct: 1709 GPRSTPTQGQTQQAAPS-APSSVKFSELTTTSVNVSWEAPQFPN----GILEGYRLVYEP 1763
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1764 CSPVDGVSKIVTVDVKGNSPLWLKVKDLAEGVTYRFRIRA-KTFTYGPEIEANVT-TGPG 1821
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1822 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1879
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1880 VSSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1915
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 106/281 (37%), Gaps = 37/281 (13%)
Query: 6 GNVTIFCNPEAA--PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
G + P A P+P+ W +DG I R I L+I D+G Y A
Sbjct: 127 GEAAVIRAPRIASFPQPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAV 186
Query: 64 NVHGMDESKGRLIVLH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLD 112
N D + I L GP+ I +A + L C A+ L+
Sbjct: 187 NDKNGDNKTSQPITLTVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTLECVANARPLIK 246
Query: 113 VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKIS 169
+ IW +GV L + I+ L I N + +DAG YEC + S+V +
Sbjct: 247 LHIIWKKDGV---------LLSGGISDHNRRLTIPNPTGSDAGYYECEAVLRSSSVPSVV 297
Query: 170 TKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229
+ V PP V+ E H T+ + D + + I TW+ +
Sbjct: 298 RGAYLSVLEPPQF---VKEPERHITAEMEKVVDIPCQAKGVPPPSI--------TWYKDA 346
Query: 230 EHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNELG 269
V +++ R+ R + ++ + LVP T F+ A N G
Sbjct: 347 AVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNAAG 387
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1832 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVSSYTFSMD-- 1888
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1889 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1922
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ R + +G L IS + DD+G++ C A N
Sbjct: 326 VDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQISGLVPDDTGMFQCFARNA 385
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI- 124
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 386 AGEVQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERIL 442
Query: 125 --GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ L TP ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 443 ASGSVQLPRF-TP---LESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 492
>sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 PE=2 SV=1
Length = 2176
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 264/601 (43%), Gaps = 46/601 (7%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
+G +V + C AP+P W+K I+ SG R + E+G+LLISP D+G Y+
Sbjct: 419 DGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTLLESGSLLISPTHISDAGTYT 478
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C ATN G+DE+ L+V + + P ++ + C + + V Y+W
Sbjct: 479 CLATNSRGVDEASADLVVW-ARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK 537
Query: 120 NGVRIGNMDLNELET-PNINID-GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
+G + +ET P I +D G L I+ D G Y C V S G S + V
Sbjct: 538 DGATLA------VETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAGGNDSRNAHLRVR 591
Query: 178 GPPGLPGG--VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
P P + V + + + W P+ Y + N N+ W ++
Sbjct: 592 QLPHAPEHPVATLSTVERRAINLTWAKPFDGNSPLMRYVLEMSEN-NAPW-----TILLA 645
Query: 236 EVDRYTGRKEASIENV--LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSR 293
VD EA+ V LVP +Y+F++ A N++G G+ S + + + P + P P
Sbjct: 646 SVD-----PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQN 700
Query: 294 IGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIAV 350
+ G + I W+P P QN Y I + +F++ T + N+ +
Sbjct: 701 VIASGRTNQSIMIQWQPPPESHQNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLED 760
Query: 351 VRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410
+ I +T YE++V A N G G S VT ++ + +P V P V + NST I T
Sbjct: 761 LII-----WTNYEIEVAAYNSAGLGVYSSKVTEWTLQGVPTVPPGNVHAEATNSTTIRFT 815
Query: 411 WNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYV 467
WN + I G G+++ W+ EE + + + + + GL+ T+Y+
Sbjct: 816 WNAPS--PQFINGINQGYKLIAWEPAQEEEVTMVTARPNFQDSIHVGFVSGLKKFTEYFT 873
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V+ + G+GP S L RT+ P P + I T++ V+W+ P + +
Sbjct: 874 SVLCFTTPGDGPRSSPQLVRTHEDVP-GPVGHLSFNDILDTSLKVSWQ--EPGEKNGILT 930
Query: 528 GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
GY++ E ++ +R + V TL+ + L+ Y + V A ++ G G++S+ I
Sbjct: 931 GYRISWEEYNRTNTRVTHYLPNV--TLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI 988
Query: 588 T 588
+
Sbjct: 989 S 989
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 183/444 (41%), Gaps = 58/444 (13%)
Query: 179 PPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF----NVSEHVIG 234
PP P VQ +V S + W G+ P+ +Y I R + W +VS +
Sbjct: 1406 PPSKPV-VQQEDVKARSVLLSWEPGSDGLSPVRYYTIQTRELPSGRWALHSASVSHNASA 1464
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
VDR L P+++Y+F+V A N++G E S S T P +AP+ +
Sbjct: 1465 FTVDR------------LKPFTSYKFRVKATNDIGDSEFSEESESLTTLQAAPDEAPTIL 1512
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
+ I W+P +K N + ++I +R+ + TL+ N G +
Sbjct: 1513 SVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRELLYDGLRGFTLRGINNPGAKWAELT 1572
Query: 355 SEFY-------------------YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395
S + + YE+++ N VG GP S +F E +P APQ
Sbjct: 1573 SLYSMRNLTRPSLTQYELDNLSKHRRYEIRMSIYNAVGEGPLSPPQEVFVGEAVPTAAPQ 1632
Query: 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYW---KEDNPEETAVYYLSRTTRN 452
V +T ++VTW P L +N G + G++I +W + + E +L+ +
Sbjct: 1633 NVAIHSATATQLDVTWEPPPL--DNQNGDIQGYKIYFWEVQRRNLTERVKTLFLAENSVK 1690
Query: 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ G T Y V V A+N AG+GP S +T + AP P S V + T+V+V
Sbjct: 1691 LKNLTGY---TAYMVSVAAFNAAGDGPRSTPTRGQTQQAAPSAPGS-VKFSELTTTSVNV 1746
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+W +P F P+ GY++ V+E PV VD+ ++V
Sbjct: 1747 SWD--APQFPNGPLEGYRL-VYE----------PCTPVDGVSKIVTVDVKGNSPLWLKVK 1793
Query: 573 AFSNGGDGRMSSPAITFQMGEEKE 596
+ G R A TF G E E
Sbjct: 1794 DLAEGMTYRFRIKAKTFTYGPEIE 1817
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 193/452 (42%), Gaps = 54/452 (11%)
Query: 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGG---VQVVE 190
PN+ ++ +T + E ++ G+ + I G PP LPG + +
Sbjct: 951 PNVTLE---YRVTGLTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELPGAPTNLGISN 1007
Query: 191 VHKTSATIQWTDGATNGRPITHYKIIARTNW---NSTWFNVSEHVIGKEVDRYTGRKEAS 247
+ S T+Q+ G I+ + + A+ W + + +G E D +
Sbjct: 1008 IGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLI--YQLGNEPDA----RSME 1061
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSIS 307
+ + L P++ Y F++ N +G PS PS + T P AP+ + L +
Sbjct: 1062 VPD-LNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR 1120
Query: 308 WEPLPREKQNA--PNIYYKI-FWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY------ 358
W PLP + N ++ YKI + R + S T+++ R+ E+
Sbjct: 1121 WMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQD---------RVEREYTIEDLEE 1171
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIR 418
+TEY V+VQA N +G GP S+ V + E +P P V + S+++ V W+ I
Sbjct: 1172 WTEYRVQVQAFNAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEAD 1231
Query: 419 ENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG 478
N G ++G++++Y ++D+ + + + + A + GL Y V+V+A+ G+G
Sbjct: 1232 RN--GLVLGYKVRYKEKDSDSQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDG 1289
Query: 479 -PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537
P LERT P PP + + T+V + W+ P+ I+ Y++
Sbjct: 1290 SPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQI------ 1340
Query: 538 QDMSRANDTIIPVGNTLDADIVDLSPGKRYHM 569
R N T NT ++ L+P R +M
Sbjct: 1341 --THRLNAT---TANTATVEV--LAPSARQYM 1365
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 18/415 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
E PG G + ++ TS + W + +T Y+I + +N T V+ ++
Sbjct: 896 EDVPGPVGHLSFNDILDTSLKVSWQEPGEKNGILTGYRI-SWEEYNRTNTRVTHYLPNVT 954
Query: 237 VD-RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIG 295
++ R TG L +TY +V A G G+ S+ + P + P AP+ +G
Sbjct: 955 LEYRVTG---------LTALTTYTIEVAAMTSKGQGQVSASTISSGVPPELP-GAPTNLG 1004
Query: 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIA-VVRI 353
IG S++ + P + + + E + L + GN A + +
Sbjct: 1005 IS--NIGPRSVTLQFRPGYDGKTSISRWVVEAQVGVIGEGEEWLLIYQLGNEPDARSMEV 1062
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESE-VVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
P +T Y +++ +N VG P S+ I + + P +AP V R + T++ + W
Sbjct: 1063 PDLNPFTYYSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLRWM 1122
Query: 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472
P+ + N +G++IKY + D +T + + I L+ T+Y V+V A+
Sbjct: 1123 PLPEMEYNGNPESVGYKIKYGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAF 1182
Query: 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N G GP S+ + RT P P+ V +++ V W + + ++GYKVR
Sbjct: 1183 NAIGSGPWSQAVVGRTRESVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVR 1242
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
E D D S+ ++ ++ A + L Y ++VLAF+ GDG S P I
Sbjct: 1243 YKEKDSD-SQPRFWLVEGNSSRSAQLTGLGKYVLYEVQVLAFTRIGDGSPSHPPI 1296
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 174/414 (42%), Gaps = 31/414 (7%)
Query: 176 VEGPPGL-PGGVQVVEVHKTSATIQWT---DGATNGRPIT-HYKI-IARTNWNSTWFNVS 229
++ PP + P V + +TS ++W + NG P + YKI R++ + +
Sbjct: 1096 LQAPPDIAPANVTLRTASETSLWLRWMPLPEMEYNGNPESVGYKIKYGRSDGHGKTLS-- 1153
Query: 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQ 289
H + V+R E +IE+ L W+ Y +V A N +G G P S + T P
Sbjct: 1154 -HTVQDRVER-----EYTIED-LEEWTEYRVQVQAFNAIGSG-PWSQAVVGRTRESVPSS 1205
Query: 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIA 349
P+ + + + W +P +N + YK+ +++K D++ Q GN +
Sbjct: 1206 GPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEK-DSDSQPRFWLVEGNSSRS 1264
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
++ Y YEV+V A +G G P + + +D+P P G+ +T++
Sbjct: 1265 A-QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVR 1322
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P I I HR+ + V L+ + R + + GL+P++ Y +
Sbjct: 1323 LIWQPPAAPNGIILAYQITHRLNATTANT---ATVEVLAPSARQY-MATGLKPESVYLFR 1378
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPS--AVHIKGINPTTVHVTWRYVSPSFEEEPI 526
+ A G G +E + T ++ +PPS V + + +V ++W S P+
Sbjct: 1379 ITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQQEDVKARSVLLSWEPGSDGL--SPV 1436
Query: 527 IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGD 579
Y ++ E+ R V + A VD L P Y RV A ++ GD
Sbjct: 1437 RYYTIQTRELPS--GRWALHSASVSHNASAFTVDRLKPFTSYKFRVKATNDIGD 1488
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 26/338 (7%)
Query: 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQN 317
YE ++ N +G G P SP + P AP + L ++WEP P + QN
Sbjct: 1599 YEIRMSIYNAVGEG-PLSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQN 1657
Query: 318 APNIYYKI-FW--RKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP 374
YKI FW +++N TE + +TL N V++ + YT Y V V A N G
Sbjct: 1658 GDIQGYKIYFWEVQRRNLTE-RVKTLFLAENS----VKLKNLTGYTAYMVSVAAFNAAGD 1712
Query: 375 GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY-- 432
GP S + + P AP V +T++NV+W+ + G L G+R+ Y
Sbjct: 1713 GPRSTPTRGQTQQAAPS-APGSVKFSELTTTSVNVSWDAPQFPN----GPLEGYRLVYEP 1767
Query: 433 -WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491
D + + + W + L Y ++ A GPE E + T
Sbjct: 1768 CTPVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKA-KTFTYGPEIEANIT-TGPG 1825
Query: 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-- 549
P V I + + + W P + PI Y + D+ + IP
Sbjct: 1826 EGAPGPPGVPIIVRYSSAIAIHWSSGDPG--KGPITRYVIEARPSDEGLWDILIKDIPKE 1883
Query: 550 -VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586
T DI L PG Y RV+A ++ G G SSP+
Sbjct: 1884 VTSYTFSMDI--LKPGVSYDFRVIAVNDYGFGTPSSPS 1919
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 8/172 (4%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNII--GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNV 65
V I C + P P W KD ++ G R K +G L IS + DD+G+ C A N
Sbjct: 330 VDIPCRAKGVPPPSITWYKDAALVEVGKLTRFKQRSDGGLQISGLLPDDTGMLQCFAHNA 389
Query: 66 HGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIG 125
G ++ L V + P T+ ++ L C T A W G RI
Sbjct: 390 AGEAQTSTYLAVTSIAPNITRGPLDSTVIDGMSVVLAC--ETSGAPRPAITW-QKGERI- 445
Query: 126 NMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
+ ++ P ++ G L I+ +DAG Y C+ ++ G ++V
Sbjct: 446 -LASGSVQLPRFTLLESGSLLISPTHISDAGTYTCLATNSRGVDEASADLVV 496
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 188 VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEAS 247
++ + ++ I W+ G PIT Y I AR + W ++ I KEV YT +
Sbjct: 1836 IIVRYSSAIAIHWSSGDPGKGPITRYVIEARPSDEGLW-DILIKDIPKEVTSYTFSMD-- 1892
Query: 248 IENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
+L P +Y+F+VIA N+ G+G PSSPS + PA K
Sbjct: 1893 ---ILKPGVSYDFRVIAVNDYGFGTPSSPS--QSVPAQK 1926
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 39/275 (14%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG I R I L+I D+G Y A N D + I
Sbjct: 145 PRPQVTWFRDGRKIPPSSRIAITLENTLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPIT 204
Query: 78 LH-----GPSYYEQLPPKI------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI-- 124
L GP+ I +A + + C A+ L+ + +W +G +
Sbjct: 205 LAVENVGGPADPIAPTIIIPPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGAPLSS 264
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC---VVKSTVGKISTKTTVIVEGPPG 181
G D N L I N + +DAG YEC + S+V ++ + V PP
Sbjct: 265 GISDYNR-----------RLTIANPTVSDAGYYECEAMLRSSSVAPVTRGAYLSVLEPPQ 313
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
V+ E H T+ + D + + I TW+ + V ++ R+
Sbjct: 314 F---VREPERHITAEMEKVVDIPCRAKGVPPPSI--------TWYKDAALVEVGKLTRFK 362
Query: 242 GRKEASIE-NVLVPWSTYEFKVIAGNELGYGEPSS 275
R + ++ + L+P T + A N G + S+
Sbjct: 363 QRSDGGLQISGLLPDDTGMLQCFAHNAAGEAQTST 397
>sp|Q90478|L1CA1_DANRE Neural cell adhesion molecule L1.1 (Fragment) OS=Danio rerio
GN=nadl1.1 PE=2 SV=1
Length = 1197
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/615 (25%), Positives = 256/615 (41%), Gaps = 73/615 (11%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSC 60
A G V + C +P PK W+ +I S + NG+L IS VS +DS Y+C
Sbjct: 373 ATAGQTVMLDCRTFGSPLPKIHWEILDSIPALSNAKISQTTNGSLKISNVSEEDSNRYTC 432
Query: 61 TATNVHGMDESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI- 116
+ + + + ++ + GP P + + + L C + L +
Sbjct: 433 SVSETNKSISADVEVLNRTKIVGP------PQNLHVIRGSDAILHCKYTVDHNLKSPTVQ 486
Query: 117 WTHNGVRI----GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W +G +I N +E+E G L++ + D G Y C V +T+ +
Sbjct: 487 WNKDGHKITASTSNDKYHEIE--------GSLKVLDVQMEDMGIYSCEVSTTLDSDTASG 538
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P P +++ E + S TI W N P+T Y I E
Sbjct: 539 YITVQDKPDPPQSLKLSEKMERSVTISWMPSVENNSPVTEYVI--------------EMN 584
Query: 233 IGKEVDRYTGRKEASIENVLVPW------STYEFKVIAGNELGYGEPSSPSPQYNTPADK 286
G+ D +K S+ + W S Y F++ A N +G P+ S Y+TPA K
Sbjct: 585 EGETPDEGQWQKYRSVSQDIDSWRSICSYSKYHFQIRAVNSIGTSAPTESSLSYSTPAAK 644
Query: 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNV 346
P P + + ISW+ + R + N P YK+FWR+ D S +V
Sbjct: 645 PDTNPENVMTLSTDPKSMIISWQEMDRRQFNGPGFQYKVFWRRAAD----SGAHWTESSV 700
Query: 347 GIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406
+ + + + +E+KVQA+ND+G PE V +S ED P AP + T+
Sbjct: 701 SNPPLMVNNTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGEDFPLEAPSALSVTELQKTS 760
Query: 407 INVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT----------TRNWALI 456
+ V W+P+ E++RG L+G++I + + ET +S + ++
Sbjct: 761 VMVRWSPVR--PESVRGHLLGYKIYLRMKGSQWETPGRAVSSSGNPTVIEVPADAAEKIV 818
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWR 515
LQ + Y + + A+N+ GEGP SE P+ P V + P+ +T R
Sbjct: 819 SDLQFYSDYTLTITAFNSKGEGPHSEESF-----STPEGAPGPVLFLPFDSPSESEITLR 873
Query: 516 YVSPSFEEEPIIGYKVRVWEV---DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
+ +P I GY ++ EV + +P + + +L+P RY +
Sbjct: 874 WEAPHKPNGEIRGYLLQYQEVVIGSESPQHVESIDLPA--VTEFTLKNLNPESRYTFHLS 931
Query: 573 AFSNGGDGRMSSPAI 587
A ++ GDG +PAI
Sbjct: 932 ARNDAGDG---APAI 943
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G +T+ C PE P P+ W + + + +K++ N L I V D G Y CTA N
Sbjct: 192 GQTLTLQCIPEGLPTPEVHWDRIDSALSPNRTKKLYNNRWLQIDNVLESDDGEYVCTARN 251
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
+ + V P Y+ + P + A ++L C A ++ W+ NGV +
Sbjct: 252 SENSVKHHYTVTVEAAP-YWTRSPEEHLYAPGETVRLDCKADGIPAPNIT--WSINGVPV 308
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPGLP 183
D++ P + G L ++N F+D Y+C + G I T V +VE LP
Sbjct: 309 SGTDVD----PRRRVSSGKLILSNVEFSDTAVYQCEAVNKHGSILINTHVHVVE----LP 360
Query: 184 GGVQVVEVHKTSATIQWT---DGATNGRPI--THYKII 216
+ + AT T D T G P+ H++I+
Sbjct: 361 AQILTPDERLYQATAGQTVMLDCRTFGSPLPKIHWEIL 398
>sp|Q7Z5N4|SDK1_HUMAN Protein sidekick-1 OS=Homo sapiens GN=SDK1 PE=1 SV=3
Length = 2213
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 253/597 (42%), Gaps = 39/597 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK++ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 493 DGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYT 552
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + S P + L C A + + + Y+W
Sbjct: 553 CYAANTEGSLNASATLTVWNRTSIVHP-PEDHVVIKGTTATLHCGATHDPRVSLRYVWKK 611
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V + + + + DG LL I+ D G+Y C + S G S + V
Sbjct: 612 DNVALTPSSTSRIV---VEKDGSLL-ISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIEL 667
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + V H + + W PI +Y I+ + NS W V +G E+
Sbjct: 668 PHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPILYY-IVELSENNSPW-KVHLSNVGPEM 725
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A NE+G G+ S+ + + P + P P I
Sbjct: 726 TGVT-------VSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKNIVAS 778
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q + + + +
Sbjct: 779 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNIT---SPEVNYCLVTDL 835
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST I WNP
Sbjct: 836 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPP- 894
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 895 -QQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTT 953
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T KP + H+ I T++ V+W+ P + I GY++
Sbjct: 954 PGDGPPSTPQLVWTQE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLEKNGIITGYQIS 1008
Query: 533 VWEV-DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ T + I LS Y + V A + G G ++S I+
Sbjct: 1009 -WEVYGRNDSRLTHTL--NSTTHEYKIQGLSSLTTYTIDVAAVTAVGTGLVTSSTIS 1062
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 158/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKI----IARTNWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + + R W + ++S VDR
Sbjct: 1485 VPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDR-- 1542
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + SS + T D P + P +
Sbjct: 1543 ----------LRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTT 1592
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKE--YGN 345
+ I W+P E N Y+I++R+ KN +E + +
Sbjct: 1593 SSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKT 1652
Query: 346 VGIAVVRIPSEFY----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
V + E Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1653 VNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTP 1712
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G++I YW+ D+ ET + + L
Sbjct: 1713 LTASQLEVTWDPPPPESQN--GNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTS 1770
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY V + A+N AG+GP+S+ RT++ AP PS + I TT++V+W P+
Sbjct: 1771 HTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGA-PSFLAFSEITSTTLNVSWG--EPAA 1827
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1828 ANGILQGYRV 1837
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 151/614 (24%), Positives = 228/614 (37%), Gaps = 81/614 (13%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
V I C P P W KD I R K+ +G L I + +DSGI+ C A+N
Sbjct: 403 TVDIGCQAMGVPLPTLQWYKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASN 462
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTH 119
G ++ L V + + Q P T+ LRC + +I
Sbjct: 463 EGGEIQTHTYLDVTNIAPVFTQRPVDTTVTDGMTAILRCEVSGAPKPAITWKRENHILAS 522
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT------- 172
VRI L ++ G L+I DAG Y C +T G ++
Sbjct: 523 GSVRIPRFML---------LESGGLQIAPVFIQDAGNYTCYAANTEGSLNASATLTVWNR 573
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
T IV P V + T+AT+ GAT+ ++ + + N T + S V
Sbjct: 574 TSIVHPPE------DHVVIKGTTATLHC--GATHDPRVSLRYVWKKDNVALTPSSTSRIV 625
Query: 233 IGKEVDRYTGRKEASIENVLVPWS----TYEFKVIA--GNELGYGE------PSSPSPQY 280
+ K+ + WS Y ++++ GN+ P SP
Sbjct: 626 VEKDGSLLISQT----------WSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLL 675
Query: 281 NTPADKPYQAPSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSET 339
+P A + +SW P N+P +YY + + N S
Sbjct: 676 VSPNSSHSHA-------------VVLSWVRPF---DGNSPILYYIVELSENN-----SPW 714
Query: 340 LKEYGNVG--IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQG 396
NVG + V + Y+ +V A+N+VG G S E + E+ P P+
Sbjct: 715 KVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSAPPKN 774
Query: 397 VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456
+ + G + +I V W P N G L G+ ++Y P E ++ N+ L+
Sbjct: 775 IVASGRTNQSIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLV 832
Query: 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRY 516
L T+Y ++V AYN AG G S E T + P PP V + +N TT+ W
Sbjct: 833 TDLIIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNP 892
Query: 517 VSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFS 575
F GYK+ W D + TI P I +L Y VL F+
Sbjct: 893 PPQQFINGINQGYKLLAWPADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFT 952
Query: 576 NGGDGRMSSPAITF 589
GDG S+P + +
Sbjct: 953 TPGDGPPSTPQLVW 966
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 167/416 (40%), Gaps = 20/416 (4%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + IT Y+I +W N S H +
Sbjct: 969 EDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQI----SWEVYGRNDSRLTHTLN 1024
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
Y + +S+ +TY V A +G G +S + P D P APS +
Sbjct: 1025 STTHEYKIQGLSSL-------TTYTIDVAAVTAVGTGLVTSSTISSGVPPDLP-GAPSNL 1076
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + + D E +E ++ IP
Sbjct: 1077 VISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1136
Query: 355 SEFYYTEYEVKVQAINDVGPGP---ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411
+ YT Y +++ +N VGP P S V+ A P VAP V R + T++ + W
Sbjct: 1137 NLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAP--PDVAPTSVTVRTASETSLRLRW 1194
Query: 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMA 471
P+ + N +G+RIKYW+ D +S I L+ +Y +++ A
Sbjct: 1195 VPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA 1254
Query: 472 YNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV 531
+N G GP SE RT P P V + ++ T + +TW V + I+GYK+
Sbjct: 1255 FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKI 1314
Query: 532 RVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D I+ +T A + L Y ++VLAF+ G+G S+P I
Sbjct: 1315 LFRAKDLD-PEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLI 1369
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 56/438 (12%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
+ T +T+ PP LPG + + + SAT+Q+ G I+ + + +
Sbjct: 1055 LVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVG---- 1110
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G P SPS
Sbjct: 1111 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVG-PSPYSPS 1162
Query: 278 PQY-NTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDT 333
+ T P AP+ + L + W PLP + N ++ Y+I +WR +
Sbjct: 1163 SRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWR----S 1218
Query: 334 EFQSETLKEYGNVGIAVVRIPSEF------YYTEYEVKVQAINDVGPGPESEVVTIFSAE 387
+ QS + + + R+ EF + EYE+++QA N VG GP SEVV + E
Sbjct: 1219 DLQSSAVAQ-----VVSDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRE 1273
Query: 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLS 447
+P AP+ V + +ST I +TW + +N G ++G++I + +D E + +
Sbjct: 1274 SVPSAAPENVSAEAVSSTQILLTWTSVPEQDQN--GLILGYKILFRAKDLDPEPRSHIVR 1331
Query: 448 RTTRNWALIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGIN 506
AL+ GL+ Y ++V+A+ G G P + LERT AP PP + +
Sbjct: 1332 GNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAP-GPPVRLVFPEVR 1390
Query: 507 PTTVHVTWRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLS 562
T+V + W+ EEP I+GY++ S T + VG T+ DL+
Sbjct: 1391 LTSVRIVWQP-----PEEPNGIILGYQIAYRLASS--SPHTFTTVEVGATVRQFTATDLA 1443
Query: 563 PGKRYHMRVLAFSNGGDG 580
P Y R+ A + G G
Sbjct: 1444 PESAYIFRLSAKTRQGWG 1461
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 195/488 (39%), Gaps = 51/488 (10%)
Query: 156 EYECVVKSTVGKISTKTTVIVE----GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPIT 211
E + + + +G T +I+E PG P + EV TS I W I
Sbjct: 1350 ELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL 1409
Query: 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271
Y+I R +S+ + +G V ++T L P S Y F++ A G+G
Sbjct: 1410 GYQIAYRLA-SSSPHTFTTVEVGATVRQFTATD-------LAPESAYIFRLSAKTRQGWG 1461
Query: 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331
EP + ++P P + ++ S+ + +P +P Y+ + R+
Sbjct: 1462 EPLEATVITTEKRERP-APPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELP 1520
Query: 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP-ESEVVTIFSAEDMP 390
E+Q+ + VV F T Y+++++A ND+G SE + + +D+P
Sbjct: 1521 RGEWQTYSSSISHEATACVVDRLRPF--TSYKLRLKATNDIGDSDFSSETEAVTTLQDVP 1578
Query: 391 QVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE--------------D 436
P V + ++++ + W P E++ G L G+RI Y++E
Sbjct: 1579 GEPPGSVSATPHTTSSVLIQWQPPR--DESLNGLLQGYRI-YYRELEYEAGSGTEAKTLK 1635
Query: 437 NP-----EETAVYYL----SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLER 487
NP E TA S +T + L+ +Y V + AYN GE P S
Sbjct: 1636 NPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVF 1695
Query: 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547
AP P V + + + + VTW P + I GYK+ WE D +
Sbjct: 1696 VGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKV 1755
Query: 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYS- 606
+ + + + +L+ +Y + + AF+ GDG S P Q G + G+P+ +
Sbjct: 1756 LFLPEPV-VRLKNLTSHTKYLVSISAFNAAGDGPKSDP----QQGRTHQAAPGAPSFLAF 1810
Query: 607 ---ASTTL 611
STTL
Sbjct: 1811 SEITSTTL 1818
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 193/459 (42%), Gaps = 35/459 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P V V +T
Sbjct: 1129 DAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASET 1188
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVSEHVIGKEV-DRYTGRKEASIE 249
S ++W D NG P + Y+I W S ++ + + V DR +E +IE
Sbjct: 1189 SLRLRWVPLPDSQYNGNPESVGYRI---KYWRS---DLQSSAVAQVVSDRL--EREFTIE 1240
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1241 ELEEW-MEYELQMQAFNAVGAG-PWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWT 1298
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YKI +R K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1299 SVPEQDQNGLILGYKILFRAKDLDPEPRSHIVR--GNHTQSAL-LAGLRKFVLYELQVLA 1355
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P + ++ + +D P + VF T++ + W P E G ++G
Sbjct: 1356 FTRIGNGVPSTPLILERTKDDAPGPPVRLVFPE-VRLTSVRIVWQP----PEEPNGIILG 1410
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1411 YQIAYRLASSSPHTFTTVEVGATVRQFT-ATDLAPESAYIFRLSAKTRQGWGEPLEATVI 1469
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + ++V E+ + + +
Sbjct: 1470 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSS 1529
Query: 547 IIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSS 584
I + A +VD L P Y +R+ A ++ GD SS
Sbjct: 1530 SI--SHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSS 1566
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G + P T Y I AR + W + K
Sbjct: 1899 AEGSPGSPRDVLVTK-SASELTLQWTEGHSGDTPTTGYVIEARPSDEGLW-----DMFVK 1952
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R S++ L TYEF+V+A NE GYGEPS+PS + + P+
Sbjct: 1953 DIPRSATSYTLSLDK-LRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPF 2004
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 58/153 (37%), Gaps = 20/153 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W ++G+ I R I L+I + D+G Y A N + I
Sbjct: 219 PRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIH 278
Query: 78 L---HGPSYYEQLPPKI--------TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L E + P I +A L C A + D++ W NGVRI
Sbjct: 279 LSIARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRI-- 336
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L I+N + AD G Y C
Sbjct: 337 -------TSGLHSFGRRLTISNPTSADTGPYVC 362
>sp|P97685|NFASC_RAT Neurofascin OS=Rattus norvegicus GN=Nfasc PE=1 SV=2
Length = 1240
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + ++ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSKFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE E V +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 844 EWD----HPEHPNGILIGYTLRY 862
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 207/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G+ + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWLVNGDPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ + RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRM--LSPRNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFEED-- 668
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 669 -QFQPGVWHDHSKFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE E + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETVIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 836 PNLETINLEWDH--PEHPNGILIGYTLR 861
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WLVNGD 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>sp|Q03696|NGCA_CHICK Neuronal-glial cell adhesion molecule OS=Gallus gallus PE=1 SV=2
Length = 1266
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/607 (25%), Positives = 247/607 (40%), Gaps = 84/607 (13%)
Query: 7 NVTIF--CNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT 63
N T+F C AP P W R +F NG+L +S V D G+Y+C A
Sbjct: 434 NQTVFLHCRTFGAPAPNVEWLTPTLEPALQDDRSFVFTNGSLRVSAVRGGDGGVYTCMAQ 493
Query: 64 NVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI-WTHNGV 122
N H + S L+ + P+ P T + C A + + + W G
Sbjct: 494 NAHS-NGSLTALLEVRAPTRISAPPRSATAKKGETVTFHCGATFDPAVTPGELRWLRGGQ 552
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPG 181
+ + P ++ + ++N + D G +C + + + + V G PP
Sbjct: 553 PLPD-------DPRYSV-AAEMTVSNVDYGDEGTIQCRASTPLDSAEAEAQLRVVGRPPS 604
Query: 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241
+QV+EV + + WT G + PI F V E +++ R
Sbjct: 605 R--DLQVMEVDEHRVRLSWTPGDDHNSPIEK-------------FVVEEEEEREDLQRGF 649
Query: 242 GRKEASIEN-----VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296
G + + L P+ + F+V+A N G GE +PS TP P + P + G
Sbjct: 650 GAADVPGQPWTPPLPLSPYGRFPFRVVAVNAYGRGEHHAPSAPIETPPAAPERNPGGVHG 709
Query: 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEY---GNVGIAVVRI 353
G + G+L I+WEPLP + NAP Y++ WR + + V V +
Sbjct: 710 EGNETGNLVITWEPLPPQAWNAPWARYRVQWRPLEEPGGGGPSGGFPWAESTVDAPPVVV 769
Query: 354 PSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN- 412
++ ++++VQA+N G GPE+ S ED+P V P+ V NS+ + V W
Sbjct: 770 GGLPPFSPFQIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWTL 829
Query: 413 ---PIELIRENIRGRLIGHRIKYWK------------------------EDNPEETAVYY 445
P EL RGRL G R+ YW+ ED P V
Sbjct: 830 GGGPKEL-----RGRLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVAL 884
Query: 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI 505
AL+ GL+P ++Y ++V+ +N G+GP SE T P PP + ++ +
Sbjct: 885 TVGGDARGALLGGLRPWSRYQLRVLVFNGRGDGPPSEPIAFETPEGVP-GPPEELRVERL 943
Query: 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL---DADIVDLS 562
+ T + V R +F+ I GY +R +V+ + +P G+ L D+ L+
Sbjct: 944 DDTALSVVERR---TFKRS-ITGYVLRYQQVEP------GSALPGGSVLRDPQCDLRGLN 993
Query: 563 PGKRYHM 569
RY +
Sbjct: 994 ARSRYRL 1000
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 47/272 (17%)
Query: 359 YTEYEVKVQAINDVGPG----PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
Y + +V A+N G G P + + T +A P+ P GV G + + +TW P+
Sbjct: 668 YGRFPFRVVAVNAYGRGEHHAPSAPIETPPAA---PERNPGGVHGEGNETGNLVITWEPL 724
Query: 415 ELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA---------LIVGLQPDTKY 465
N +R+++ P E WA ++ GL P + +
Sbjct: 725 PPQAWN--APWARYRVQW----RPLEEPGGGGPSGGFPWAESTVDAPPVVVGGLPPFSPF 778
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS-PSFEEE 524
++V A N AG+GPE+ + + P P V ++ +N +TV V W P
Sbjct: 779 QIRVQAVNGAGKGPEATPGVGHSGEDLPLVYPENVGVELLNSSTVRVRWTLGGGPKELRG 838
Query: 525 PIIGYKVRVWEVDQDMSRANDTIIPV-----------------------GNTLDADIVDL 561
+ G++V W + R+ P G+ A + L
Sbjct: 839 RLRGFRVLYWRLGWVGERSRRQAPPDPPQIPQSPAEDPPPFPPVALTVGGDARGALLGGL 898
Query: 562 SPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593
P RY +RVL F+ GDG S P I F+ E
Sbjct: 899 RPWSRYQLRVLVFNGRGDGPPSEP-IAFETPE 929
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 15/182 (8%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
G G + C P+P+ W +G I +G R+ G L++ + +DS + C
Sbjct: 339 GPGETARLDCEVGGKPRPQIQWSINGVPIEAAGAERRWLRGGALVLPELRPNDSAVLQCE 398
Query: 62 ATNVHGMDESKGRLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
A N HG + L V+ P + EQ + + ++ + L C +V ++
Sbjct: 399 ARNRHGPLLANAFLHVVELPLRMLTADEQ---RYEVVENQTVFLHCRTFGAPAPNVEWL- 454
Query: 118 THNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177
++ + + G L ++ D G Y C+ ++ S + V
Sbjct: 455 ------TPTLEPALQDDRSFVFTNGSLRVSAVRGGDGGVYTCMAQNAHSNGSLTALLEVR 508
Query: 178 GP 179
P
Sbjct: 509 AP 510
Score = 36.6 bits (83), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A GG+V + C E P P W++ + GG N L + V+ D G Y C
Sbjct: 250 ALRGGSVVLECIAEGLPTPWVRWRRLNGPLLPGGVGNF--NKTLRLWGVTESDDGEYECV 307
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
A N G + V P Y+ + P +L C + + W+ NG
Sbjct: 308 AENGRGTARGTHSVTVEAAP-YWVRRPQSGVFGPGETARLDCEVGGKPRPQIQ--WSING 364
Query: 122 VRI 124
V I
Sbjct: 365 VPI 367
>sp|Q810U3|NFASC_MOUSE Neurofascin OS=Mus musculus GN=Nfasc PE=1 SV=1
Length = 1240
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 201/443 (45%), Gaps = 54/443 (12%)
Query: 12 CNPEAAPKPKFVWKKDGNIIGS---GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68
C +P P W K+G GS GG ++ENG+L I + ++D GIY+C ATN+ G
Sbjct: 452 CPFFGSPIPTLRWFKNGQ--GSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGK 509
Query: 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGN 126
E++ RL V P+ ++P +QL C + L + W + + IGN
Sbjct: 510 AENQVRLEV-KDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGN 568
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV---------- 176
E ++ L I + D G Y C+ + + + K + V
Sbjct: 569 RMKKEDDS---------LTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPTNR 619
Query: 177 -----EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231
+G P P +++ ++ + S + W G N PIT Y + + F
Sbjct: 620 LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVV----QFEEDQFQPG-- 673
Query: 232 VIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAP 291
+ + R+ G +++ + L P+ Y+F+VIA NE+G PS PS +Y T P P
Sbjct: 674 -VWHDHSRFPGSVNSAVLH-LSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNP 731
Query: 292 SRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVV 351
S + G G + ++ I+W P+ PN+ Y + WR++ ET + + NV +
Sbjct: 732 SDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRR-------ETRETWNNVTVWGS 784
Query: 352 R--IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
R + Y YE++VQA ND G GPE + + +S ED+P AP+ R N IN+
Sbjct: 785 RYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPS-APRRFRVRQPNLETINL 843
Query: 410 TWNPIELIRENIRGRLIGHRIKY 432
W+ E+ G LIG+ ++Y
Sbjct: 844 EWD----HPEHPNGILIGYILRY 862
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 206/568 (36%), Gaps = 95/568 (16%)
Query: 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSC 60
GE G + C PKP W +G + S + ++ +Y C
Sbjct: 351 GEDGR--LVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 408
Query: 61 TATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI---- 116
+N HG + + VL +PP++ A RN +R + LD +
Sbjct: 409 NTSNEHGYLLANAFVSVL-------DVPPRMLSA--RNQLIRVILYNRTRLDCPFFGSPI 459
Query: 117 ----WTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172
W NG + N+D + G LEI D G Y CV + +GK +
Sbjct: 460 PTLRWFKNG-QGSNLDGGNYHV----YENGSLEIKMIRKEDQGIYTCVATNILGKAENQV 514
Query: 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232
+ V+ P + + +V K T+Q K +W E +
Sbjct: 515 RLEVKDPTRI-YRMPEDQVAKRGTTVQLE---------CRVKHDPSLKLTVSWLKDDEPL 564
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYE-----FKVIAGNELG----------YGEPSSPS 277
Y G + ++ L + E + +A EL + ++P+
Sbjct: 565 -------YIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATPT 617
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLS-----ISWEPLPREKQNAPNIYYKIFWRKKND 332
N A P P R ++ DL+ ++W +P + N+P Y + + +
Sbjct: 618 ---NRLAALPKGRPDR--PRDLELTDLAERSVRLTW--IPGDDNNSPITDYVVQFE---E 667
Query: 333 TEFQSETLKEY----GNVGIAVVRIPSEFYYTEYEVKVQAINDVG---PGPESEVVTIFS 385
+FQ ++ G+V AV+ + Y Y+ +V A+N+VG P SE
Sbjct: 668 DQFQPGVWHDHSRFPGSVNSAVLHLSP---YVNYQFRVIAVNEVGSSHPSLPSERYRTSG 724
Query: 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445
A P+ P V G + +TW P+ G ++Y + ET +
Sbjct: 725 AP--PESNPSDVKGEGTRKNNMEITWTPMNATSA------FGPNLRYIVKWRRRETRETW 776
Query: 446 LSRTTRNWALIVGLQPD-TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKG 504
+ T +VG P Y ++V A N+ G+GPE + + + P P ++
Sbjct: 777 NNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDLPSA-PRRFRVRQ 835
Query: 505 INPTTVHVTWRYVSPSFEEEPIIGYKVR 532
N T+++ W + P +IGY +R
Sbjct: 836 PNLETINLEWDH--PEHPNGILIGYILR 861
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN--LLISPVSRDDSGIYSCTA 62
G ++ + C P P W K G + S + FEN N L I+ VS +DSG Y C A
Sbjct: 261 GMDLLLECIASGVPTPDIAWYKKGGDLPSNKAK--FENFNKALRITNVSEEDSGEYFCLA 318
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122
+N G + V P Y+ P + +A + +L C A+ V W NG
Sbjct: 319 SNKMGSIRHTISVRVKAAP-YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQ--WMVNGE 375
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV-IVEGPPG 181
+ + N PN + G + + + Y+C + G + V +++ PP
Sbjct: 376 PLQSAPPN----PNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPR 431
Query: 182 L 182
+
Sbjct: 432 M 432
>sp|Q8AV58|SDK1_CHICK Protein sidekick-1 OS=Gallus gallus GN=SDK1 PE=2 SV=1
Length = 2169
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 157/596 (26%), Positives = 246/596 (41%), Gaps = 37/596 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----RRKIFENGNLLISPVSRDDSGIYS 59
EG + C APKP WKK I+ SG R + E+G L I+PV D+G Y+
Sbjct: 445 EGMTAMLTCEVSGAPKPAISWKKGNQILASGSVQIPRFVLLESGGLQITPVFLQDAGNYT 504
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N G + L V + ++ P T+ LRC A + + + Y+W
Sbjct: 505 CHAVNSEGALNAFVMLTVWNR-TFIVHPPENSTVIKGTTATLRCEATHDPRISIRYVWKK 563
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG LL I+ D G+Y C V S G S + V
Sbjct: 564 DSVVINPSSSSRI---TVEKDGTLL-ISQTWSGDIGDYTCEVISFGGNDSRMARLEVIEL 619
Query: 180 PGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S + W P+ +Y + N NS W +
Sbjct: 620 PHSPQNLLATLNSSYSRSVVLSWVRPFDGNSPVLYYMVELSEN-NSPW--------KVHL 670
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
+ + + L P TY+F+V A N++G G+ SS + + P + P P I
Sbjct: 671 SNLDPKMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSSETSRLMLPEEPPSAPPKNIVAS 730
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E+Q K + I +
Sbjct: 731 GRTNQSIMVQWQPPPESEHNGVLHGYILRYRLAGLPGEYQ---YKNITSAEINYCLVTDL 787
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V + N G G S VT ++ + +P PQ V NST I W+P
Sbjct: 788 IIWTQYEIQVASYNGAGLGAFSRPVTEYTLQGVPTAPPQNVQVEAVNSTTIQFLWSPPP- 846
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D P V ++ + I L+ T YY V+ +
Sbjct: 847 -QQFINGINQGYKLLAWPVDAPGSVTVVTIAPDFHGVHSGCITNLKKYTTYYTSVLCFTT 905
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L RT KP + H+ I T++ V+W+ P + I GY++
Sbjct: 906 PGDGPRSAPQLLRTLE---DKPGAVGHLSFTEILDTSLKVSWQ--EPVEKNGIITGYQLS 960
Query: 533 VWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV + + T TL+ I LS Y + V A + G G ++S I+
Sbjct: 961 -WEV-YGRNESRLTRTLTNTTLEYKITGLSSLTTYTIEVAAVTAKGSGWVTSSTIS 1014
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 37/407 (9%)
Query: 190 EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIE 249
+V S + W G+ PI ++ + R N W S + + + I
Sbjct: 1441 DVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSI--------SHEATSCII 1492
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
L P+++Y+ +V A N++G + S+ + T D P + PS + + + W+
Sbjct: 1493 ESLNPFTSYKLRVKATNDIGDSDYSAETEAVTTLQDVPDEPPSSVLVTPHTTSSVLVQWQ 1552
Query: 310 PLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG------NVGIA 349
P E N + Y+I++R+ KN + ++E + + +
Sbjct: 1553 PPKAESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALT 1612
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ Y YEV + A N +G P S V +F E P +APQ + +++ + +
Sbjct: 1613 TYELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLEL 1672
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
TW+P +N G + G++I YW+ D +T + + R + L T+Y V +
Sbjct: 1673 TWDPPPADSQN--GNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSASKNLTSHTRYLVCI 1730
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
A+N AG+GP S RT++ AP PS + I TT++V+W P+ + GY
Sbjct: 1731 SAFNAAGDGPRSRPSAGRTHQAAPSA-PSFLVFSEITSTTLNVSWG--EPTAANGVLQGY 1787
Query: 530 KVRVWE---VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
+V V+E Q +S+ I + DL+ G Y RV A
Sbjct: 1788 RV-VYEPLAPVQGVSKVVTVDIKGNWQRWLKVRDLTKGMTYLFRVQA 1833
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 186/426 (43%), Gaps = 36/426 (8%)
Query: 170 TKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKI---IARTNWNS 223
T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1009 TSSTISSGVPPELPGAPSNLVISNISPRSATLQFRPGYDGKTSICKWIVEGQVGVLGEEE 1068
Query: 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTP 283
W VS H EVD + + N L P++ Y F++ N +G S PS T
Sbjct: 1069 EW--VSLH----EVDNEPDAQMLEVPN-LTPYTHYRFRMRQVNVVGASPLSQPSRVIQTL 1121
Query: 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTEFQ-SET 339
P AP + L + W PLP + N ++ Y+I FWR + Q S
Sbjct: 1122 QAPPDVAPGSVSVRTASESSLRMRWVPLPDTQYNGNPESVGYRIKFWR----VDLQPSAL 1177
Query: 340 LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399
LK + I +TEYE+++QA N +G GP +EVV + + E +P P+ V +
Sbjct: 1178 LKVISDRLERECTIQDLEEWTEYELQIQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSA 1237
Query: 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL 459
+ST I +TW+ + +N G ++G++I Y +D E + L+ GL
Sbjct: 1238 EAVSSTQILLTWSAVPESEQN--GLILGYKILYKAKDLDSEPRSQTVRGNHTQSCLLSGL 1295
Query: 460 QPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVS 518
+ Y ++V+A+ G+G P S ERT AP PP + + T+V + W+
Sbjct: 1296 RKYVLYEIRVLAFTRIGDGVPSSPVLTERTKDDAP-GPPIRLVFPEVRLTSVRIVWQP-- 1352
Query: 519 PSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAF 574
EEP I+GY++ ++ T + VG+T+ DL+P Y R A
Sbjct: 1353 ---PEEPNGIILGYQIAYRLASSSPNKF--TTVEVGSTVRQFTATDLTPESAYIFRTSAK 1407
Query: 575 SNGGDG 580
+ G G
Sbjct: 1408 TRQGWG 1413
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAIN 408
++ +P+ YT Y +++ +N VG P S+ + + + P VAP V R + +++
Sbjct: 1084 MLEVPNLTPYTHYRFRMRQVNVVGASPLSQPSRVIQTLQAPPDVAPGSVSVRTASESSLR 1143
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468
+ W P+ + N +G+RIK+W+ D + +S I L+ T+Y ++
Sbjct: 1144 MRWVPLPDTQYNGNPESVGYRIKFWRVDLQPSALLKVISDRLERECTIQDLEEWTEYELQ 1203
Query: 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIG 528
+ A+N G GP +E RT P PP V + ++ T + +TW V S + I+G
Sbjct: 1204 IQAFNAIGAGPWNEVVGVRTRESVPSAPPENVSAEAVSSTQILLTWSAVPESEQNGLILG 1263
Query: 529 YKVRVWEVDQDMSRANDTIIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAI 587
YK+ D D + T+ GN + ++ L Y +RVLAF+ GDG SSP +
Sbjct: 1264 YKILYKAKDLDSEPRSQTV--RGNHTQSCLLSGLRKYVLYEIRVLAFTRIGDGVPSSPVL 1321
Query: 588 T 588
T
Sbjct: 1322 T 1322
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 172/433 (39%), Gaps = 43/433 (9%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS-TWFNVSEHVIGKEVD 238
PG P + EV TS I W I Y+I R +S F E +G V
Sbjct: 1330 PGPPIRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPNKFTTVE--VGSTVR 1387
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T L P S Y F+ A G+GEP + ++P P ++
Sbjct: 1388 QFTATD-------LTPESAYIFRTSAKTRQGWGEPLEATVITTEKRERP-APPQQLTTPQ 1439
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358
+ S+ +P ++P Y+ + R+ + ++Q+ + ++ + F
Sbjct: 1440 SDVSSRSLQLHWVPGSDGSSPIRYFTVQVRELPNGDWQTYSSSISHEATSCIIESLNPF- 1498
Query: 359 YTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415
T Y+++V+A ND+G E+E VT +D+P P V ++++ V W P +
Sbjct: 1499 -TSYKLRVKATNDIGDSDYSAETEAVTTL--QDVPDEPPSSVLVTPHTTSSVLVQWQPPK 1555
Query: 416 LIRENIRGRLIGHRIKYWKED-------------NP-----EETAVYYLSRTTRNWAL-- 455
E++ G L+G+RI Y + D NP E T + AL
Sbjct: 1556 A--ESLNGLLLGYRIYYRELDYDAGSATESKAVKNPSALRAELTPQSSFKTVNSSSALTT 1613
Query: 456 --IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
+ L+ +Y V + AYN GE P S AP P + + ++ + + +T
Sbjct: 1614 YELTQLKKYKRYEVLMTAYNVIGESPTSTPVEVFVGEAAPAMAPQNIQVNSLSASQLELT 1673
Query: 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573
W + I GYK+ WE D + L A +L+ RY + + A
Sbjct: 1674 WDPPPADSQNGNIQGYKIYYWEGDVQNDTEKVKVFSSLRQLSAS-KNLTSHTRYLVCISA 1732
Query: 574 FSNGGDGRMSSPA 586
F+ GDG S P+
Sbjct: 1733 FNAAGDGPRSRPS 1745
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236
EG PG P + V + + T+QWT+G + +P T Y I AR + W + K+
Sbjct: 1852 EGSPGSPHEILVTK-SASGLTVQWTEGDSGEKPTTGYIIEARPSDEGLW-----DMFVKD 1905
Query: 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
+ R S++ L TYEF+V+A NE GYGEPS PS + + P+
Sbjct: 1906 IPRSATSYTVSLDK-LKQGVTYEFRVVAVNEFGYGEPSVPSVAVSAQTEAPF 1956
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 76/193 (39%), Gaps = 26/193 (13%)
Query: 18 PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77
P+P+ W +DG+ I R I L+I S D+G Y A N + LI
Sbjct: 171 PRPQVTWFRDGHKIIPSSRIAITLENQLVILATSVADAGGYYAQAVNEKNGENKTSPLIH 230
Query: 78 LHGPSYYEQ---------LPP--KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126
L S + +PP K + + L C A + ++ +W NG++I
Sbjct: 231 LSIASATDPSDPTAPIIVIPPQNKSVVVGTSEVTLECVASARPVERLSIMWKRNGIKI-- 288
Query: 127 MDLNELETPNINIDGGLLEITNASFADAGEYECVVK---STVGKISTKTTVIVEGPPGL- 182
T I+ G L ITN + AD G Y C K ST K + + PP
Sbjct: 289 -------TSGISSFGRRLTITNPTSADVGMYFCEAKLRDSTEEPARAKAFISLMVPPYFT 341
Query: 183 --PGGVQVVEVHK 193
P GV + EV K
Sbjct: 342 AEPEGVILAEVEK 354
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
+V I C P P VW KD + R K+ +G L I + D+GI+ C A+N
Sbjct: 355 DVDILCQAMGVPIPSLVWYKDSVPLSKLQNPRYKVLLSGGLRIHALRPQDAGIFQCFASN 414
Query: 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124
G ++ L V + + Q P T+ L C +++ + +
Sbjct: 415 KAGEIQTYTYLDVTNIKPAFIQPPEDTTVTEGMTAMLTCEVSGAPKPAISWKKGNQILAS 474
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176
G++ + + ++ G L+IT DAG Y C ++ G ++ + V
Sbjct: 475 GSVQIPRF----VLLESGGLQITPVFLQDAGNYTCHAVNSEGALNAFVMLTV 522
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 8 VTIFCNPEAAPKPKF--VWKKDGNIIGSG----GRRKIFENGNLLISPVSRDDSGIYSCT 61
VT+ C A P + +WK++G I SG GRR L I+ + D G+Y C
Sbjct: 263 VTLECVASARPVERLSIMWKRNGIKITSGISSFGRR-------LTITNPTSADVGMYFCE 315
Query: 62 ATNVHGMDESKGR---LIVLHGPSYYEQLPPKITIA-AHRNLQLRCSAHTEELLDVAYIW 117
A + E R I L P Y+ P + +A +++ + C A + + +W
Sbjct: 316 A-KLRDSTEEPARAKAFISLMVPPYFTAEPEGVILAEVEKDVDILCQAMGVPIPSL--VW 372
Query: 118 THNGVRIGNMDLNELETP--NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175
+ V L++L+ P + + GGL I DAG ++C + G+I T T +
Sbjct: 373 YKDSV-----PLSKLQNPRYKVLLSGGL-RIHALRPQDAGIFQCFASNKAGEIQTYTYLD 426
Query: 176 V 176
V
Sbjct: 427 V 427
>sp|Q3UH53|SDK1_MOUSE Protein sidekick-1 OS=Mus musculus GN=Sdk1 PE=2 SV=1
Length = 2193
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 252/598 (42%), Gaps = 41/598 (6%)
Query: 4 EGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYS 59
+G + C APKP WK+ +I+ SG R + E+G L I+PV D+G Y+
Sbjct: 475 DGMTAVLRCEVSGAPKPAITWKRGNHILASGSVRIPRFMLLESGGLRIAPVFIQDAGNYT 534
Query: 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119
C A N + L V + S ++ I L C A + + Y+W
Sbjct: 535 CYAANTEASVNASAMLTVWNRTSIVHPPEDRVVIKG-TTATLCCGATHDPRTSLRYVWKK 593
Query: 120 NGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179
+ V I + + + DG L+ I+ D G+Y C + S G S + V
Sbjct: 594 DNVVITASSSSRIV---VEKDGSLV-ISQTWSGDIGDYTCEIISEGGSDSRTARLEVIEL 649
Query: 180 PGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237
P P + + S T+ W P+ +Y + N NS W V +G E+
Sbjct: 650 PHPPQNLLASLSPARSHSVTLSWVRPFDGNSPVLYYIVQVSEN-NSPW-KVHLSNVGPEM 707
Query: 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGG 297
T + L P TY+F+V A N++G G+ S+ + + P + P P I
Sbjct: 708 TGVT-------VSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVAS 760
Query: 298 GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSE 356
G + + W+P P + N Y + +R E Q + + + +
Sbjct: 761 GRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEHQQRNIS---SPEVNYCLVTDL 817
Query: 357 FYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416
+T+YE++V A N G G S VT ++ + +P PQ V + NST ++ WNP
Sbjct: 818 IIWTQYEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPP- 876
Query: 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR--NWALIVGLQPDTKYYVKVMAYNN 474
++ I G G+++ W D PE V ++ + I L+ T Y+ V+ +
Sbjct: 877 -QQFINGINQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTT 935
Query: 475 AGEGPESERYLERTYRKAPQKPPSAVHIK--GINPTTVHVTWRYVSPSFEEEPIIGYKVR 532
G+GP S L T+ KP + H+ I T++ V+W+ P I+GY++
Sbjct: 936 PGDGPPSSPQLVWTHE---DKPGAVGHLSFTEILDTSLKVSWQ--EPLERNGIIMGYQIS 990
Query: 533 VWEV-DQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588
WEV ++ SR T+ +T+ + I LS Y + V A + G G +S I+
Sbjct: 991 -WEVYGRNDSRLTHTL---NSTMHEYKIQGLSSLTTYTIDVAALTAAGVGVTTSSTIS 1044
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 155/605 (25%), Positives = 236/605 (39%), Gaps = 69/605 (11%)
Query: 10 IFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
I C P P W KD + R K+ +G L I +S +DSGI+ C A+N G
Sbjct: 388 IPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGG 447
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVA-----YIWTHNGV 122
++ L V + + Q P T+ LRC + +I V
Sbjct: 448 EVQTHTYLDVTNIAPAFTQRPVDTTVTDGMTAVLRCEVSGAPKPAITWKRGNHILASGSV 507
Query: 123 RIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182
RI L ++ G L I DAG Y C +T ++ + V +
Sbjct: 508 RIPRFML---------LESGGLRIAPVFIQDAGNYTCYAANTEASVNASAMLTVWNRTSI 558
Query: 183 --PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240
P +VV + T+AT+ GAT+ RT+ W + + R
Sbjct: 559 VHPPEDRVV-IKGTTATL--CCGATHD---------PRTSLRYVWKKDNVVITASSSSRI 606
Query: 241 TGRKEASIENVLVPWS----TYEFKVIAGNELGYGEPSS-------PSPQYNTPADKPYQ 289
K+ S+ + WS Y ++I+ E G ++ P P N A
Sbjct: 607 VVEKDGSLV-ISQTWSGDIGDYTCEIIS--EGGSDSRTARLEVIELPHPPQNLLAS---L 660
Query: 290 APSRIGGGGGKIGDLSISW-EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVG- 347
+P+R +++SW P N+P +YY I +N++ ++ NVG
Sbjct: 661 SPARSH-------SVTLSWVRPF---DGNSPVLYY-IVQVSENNSPWKVH----LSNVGP 705
Query: 348 -IAVVRIPSEFYYTEYEVKVQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNST 405
+ V + Y+ +V A+N VG G S E + E+ P P+ + + G +
Sbjct: 706 EMTGVTVSGLTPARTYQFRVCAVNQVGKGQYSTETSRLMLPEEPPSAPPKNIVASGRTNQ 765
Query: 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465
+I V W P N G L G+ ++Y P E +S N+ L+ L T+Y
Sbjct: 766 SIMVQWQPPPETEHN--GVLRGYILRYRLAGLPGEHQQRNISSPEVNYCLVTDLIIWTQY 823
Query: 466 YVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP 525
++V AYN AG G S E T + P PP V + +N TTVH W F
Sbjct: 824 EIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQAEAVNSTTVHFLWNPPPQQFINGI 883
Query: 526 IIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD-IVDLSPGKRYHMRVLAFSNGGDGRMSS 584
GYK+ W D + TI P + + I +L Y VL F+ GDG SS
Sbjct: 884 NQGYKLLAWPADAPETVTVVTIAPDFHGIHHGYITNLKKFTAYFTSVLCFTTPGDGPPSS 943
Query: 585 PAITF 589
P + +
Sbjct: 944 PQLVW 948
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 41/370 (11%)
Query: 186 VQVVEVHKTSATIQWTDGATNGRPITHYKIIART----NWNSTWFNVSEHVIGKEVDRYT 241
V EV S +QW G+ PI ++ + R W + ++S V+R
Sbjct: 1467 VPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVER-- 1524
Query: 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKI 301
L P+++Y+ ++ A N++G + S+ + T D P + P +
Sbjct: 1525 ----------LRPFTSYKLRLKATNDIGDSDFSAETEAVTTLQDVPGEPPGSVSATPHTT 1574
Query: 302 GDLSISWEPLPREKQNAPNIYYKIFWRK--------------KNDTEFQSETLKEYG--- 344
+ I W+P E N Y+I++R+ K+ + ++E +
Sbjct: 1575 SSVLIQWQPPRDESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKT 1634
Query: 345 ---NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRG 401
+ + + Y YEV + A N +G P S V +F E P +APQ V
Sbjct: 1635 VNSSSSLTTYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTP 1694
Query: 402 FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQP 461
++ + VTW+P +N G + G+++ YW+ D+ ET + I L
Sbjct: 1695 LTASQLEVTWDPPPPESQN--GNIQGYKVYYWEADSRNETEKMKVLFLPEPVVKIKDLTS 1752
Query: 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521
TKY + + A+N AG+GP+S+ RT++ AP PPS + I TT++V+W PS
Sbjct: 1753 HTKYLISISAFNAAGDGPKSDPCQGRTHQAAP-GPPSFLAFSEITSTTLNVSWG--EPSA 1809
Query: 522 EEEPIIGYKV 531
+ GY+V
Sbjct: 1810 ANGILQGYRV 1819
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 168/414 (40%), Gaps = 16/414 (3%)
Query: 177 EGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE--HVIG 234
E PG G + E+ TS + W + I Y+I +W N S H +
Sbjct: 951 EDKPGAVGHLSFTEILDTSLKVSWQEPLERNGIIMGYQI----SWEVYGRNDSRLTHTLN 1006
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRI 294
+ Y + +S+ +TY V A G G +S + P D P APS +
Sbjct: 1007 STMHEYKIQGLSSL-------TTYTIDVAALTAAGVGVTTSSTISSGVPPDLP-GAPSNL 1058
Query: 295 GGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP 354
++ + P K + D E +E ++ IP
Sbjct: 1059 VISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVTLYEEENEPDAQMLEIP 1118
Query: 355 SEFYYTEYEVKVQAINDVGPGPESEVVTIF-SAEDMPQVAPQGVFSRGFNSTAINVTWNP 413
+ YT Y +++ +N VGP P S+ + + + P VAP + R + T++ + W P
Sbjct: 1119 NLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASETSLRLRWVP 1178
Query: 414 IELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYN 473
+ + N +G+R+KYW+ D P +S I L+ T+Y +++ A+N
Sbjct: 1179 LPDSQYNGNPESVGYRVKYWRSDQPSSALAQVVSDRLERELTIEELEEWTEYELRMQAFN 1238
Query: 474 NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRV 533
G GP SE RT P P V + ++ T + +TW V + I+GYKV
Sbjct: 1239 AIGAGPWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWASVPEQDQNGLILGYKVLY 1298
Query: 534 WEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587
D D ++ +T A + L Y ++VLAF+ G+G SSP I
Sbjct: 1299 CAKDLD-PEPRSHVVRGNHTQSALLAGLRKFVVYELQVLAFTRIGNGVPSSPLI 1351
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 184/431 (42%), Gaps = 42/431 (9%)
Query: 168 ISTKTTVIVEGPPGLPGG---VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224
++T +T+ PP LPG + + + SAT+Q+ G I + + +
Sbjct: 1037 VTTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVG---- 1092
Query: 225 WFNVSEHVIGKE---VDRYTGRKEASIENV----LVPWSTYEFKVIAGNELGYGEPSSPS 277
IG E V Y E + + L P++ Y F++ N +G S S
Sbjct: 1093 -------AIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSS 1145
Query: 278 PQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNA--PNIYYKI-FWRKKNDTE 334
T P AP+ + L + W PLP + N ++ Y++ +WR +
Sbjct: 1146 RVIQTLQAPPDVAPTSLTVRTASETSLRLRWVPLPDSQYNGNPESVGYRVKYWRSDQPSS 1205
Query: 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394
++ + + + I +TEYE+++QA N +G GP SE+V + E +P AP
Sbjct: 1206 ALAQVVSDRLERELT---IEELEEWTEYELRMQAFNAIGAGPWSELVRGRTRESVPSAAP 1262
Query: 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454
+ V + +ST I +TW + +N G ++G+++ Y +D E + + A
Sbjct: 1263 ENVSAEAVSSTQILLTWASVPEQDQN--GLILGYKVLYCAKDLDPEPRSHVVRGNHTQSA 1320
Query: 455 LIVGLQPDTKYYVKVMAYNNAGEG-PESERYLERTYRKAPQKPPSAVHIKGINPTTVHVT 513
L+ GL+ Y ++V+A+ G G P S LERT P PP + + T V +
Sbjct: 1321 LLAGLRKFVVYELQVLAFTRIGNGVPSSPLILERTKDDTP-GPPVRLVFPEVRLTAVRIV 1379
Query: 514 WRYVSPSFEEEP---IIGYKVRVWEVDQDMSRANDTIIPVGNTL-DADIVDLSPGKRYHM 569
W+ EEP I+GY++ S T + VG T+ +L+P Y
Sbjct: 1380 WQP-----PEEPNGVILGYQIAYRLASG--SPHTFTTVEVGATVRQFTATELAPESAYIF 1432
Query: 570 RVLAFSNGGDG 580
R+ A + G G
Sbjct: 1433 RLSAKTRQGWG 1443
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 187/469 (39%), Gaps = 53/469 (11%)
Query: 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVD 238
PG P + EV T+ I W I Y+I R S F E +G V
Sbjct: 1360 PGPPVRLVFPEVRLTAVRIVWQPPEEPNGVILGYQIAYRLASGSPHTFTTVE--VGATVR 1417
Query: 239 RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298
++T + L P S Y F++ A G+GEP + ++P P +
Sbjct: 1418 QFTATE-------LAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERP-APPRELLVPQ 1469
Query: 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLK-EYGNVGIAVVRIPSEF 357
++ S+ + +P +P Y+ + R+ E+Q+ + + AV R+
Sbjct: 1470 AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSSSISHEATACAVERLRP-- 1527
Query: 358 YYTEYEVKVQAINDVGPG---PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPI 414
+T Y+++++A ND+G E+E VT +D+P P V + ++++ + W P
Sbjct: 1528 -FTSYKLRLKATNDIGDSDFSAETEAVTTL--QDVPGEPPGSVSATPHTTSSVLIQWQPP 1584
Query: 415 ELIRENIRGRLIGHRIKYWKEDN------------------PEETAVYYLSRTTRNWAL- 455
E++ G L G+RI Y + ++ E TA + +L
Sbjct: 1585 R--DESLNGLLQGYRIYYRELESETGMSPEPKTLKSPSALRAELTAQSSFKTVNSSSSLT 1642
Query: 456 ---IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
+ L+ +Y V + AYN GE P S AP P V + + + + V
Sbjct: 1643 TYELTHLKKYRRYEVIMTAYNIIGESPASVPVEVFVGEAAPAMAPQNVQVTPLTASQLEV 1702
Query: 513 TWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572
TW P + I GYKV WE D ++ + + I DL+ +Y + +
Sbjct: 1703 TWDPPPPESQNGNIQGYKVYYWEADSRNETEKMKVLFLPEPV-VKIKDLTSHTKYLISIS 1761
Query: 573 AFSNGGDGRMSSPAITFQMGEEKEFKSGSPALYSASTTLLLVMSSTLYI 621
AF+ GDG S P G + G P+ + S + S+TL +
Sbjct: 1762 AFNAAGDGPKSDPC----QGRTHQAAPGPPSFLAFSE----ITSTTLNV 1802
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235
EG PG P V V + + T+QWT+G P T Y I AR + W + K
Sbjct: 1881 AEGSPGSPRNVLVTK-SASELTLQWTEGNAGTTPTTGYVIEARPSDEGLW-----DMFAK 1934
Query: 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPY 288
++ R ++ L TYEF+V+A N+ G+GEPS PS + A+ P+
Sbjct: 1935 DIPRSATSYTVDLDK-LRQGVTYEFRVVAVNKAGFGEPSRPSIAVSAQAEAPF 1986
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 189/458 (41%), Gaps = 33/458 (7%)
Query: 140 DGGLLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPPGL-PGGVQVVEVHKT 194
D +LEI N + + + VG S++ ++ PP + P + V +T
Sbjct: 1111 DAQMLEIPNLTPYTHYRFRMRQVNIVGPSPFSQSSRVIQTLQAPPDVAPTSLTVRTASET 1170
Query: 195 SATIQWT---DGATNGRPIT-HYKIIARTNWNSTWFNVS-EHVIGKEVDRYTGRKEASIE 249
S ++W D NG P + Y++ W S + + V+ ++R E +IE
Sbjct: 1171 SLRLRWVPLPDSQYNGNPESVGYRV---KYWRSDQPSSALAQVVSDRLER-----ELTIE 1222
Query: 250 NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309
+ + YE ++ A N +G G P S + T P AP + + ++W
Sbjct: 1223 ELEEW-TEYELRMQAFNAIGAG-PWSELVRGRTRESVPSAAPENVSAEAVSSTQILLTWA 1280
Query: 310 PLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368
+P + QN + YK+ + K+ D E +S ++ GN + + + + YE++V A
Sbjct: 1281 SVPEQDQNGLILGYKVLYCAKDLDPEPRSHVVR--GNHTQSAL-LAGLRKFVVYELQVLA 1337
Query: 369 INDVGPG-PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIG 427
+G G P S ++ + +D P + VF TA+ + W P E G ++G
Sbjct: 1338 FTRIGNGVPSSPLILERTKDDTPGPPVRLVFPE-VRLTAVRIVWQP----PEEPNGVILG 1392
Query: 428 HRIKY-WKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLE 486
++I Y +P + T R + L P++ Y ++ A G G E +
Sbjct: 1393 YQIAYRLASGSPHTFTTVEVGATVRQFT-ATELAPESAYIFRLSAKTRQGWGEPLEATVI 1451
Query: 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546
T ++ PP + + T + ++V S PI + V+V E+ + +
Sbjct: 1452 TTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTVQVRELPGGEWQTYSS 1511
Query: 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSS 584
I T A + L P Y +R+ A ++ GD S+
Sbjct: 1512 SISHEATACA-VERLRPFTSYKLRLKATNDIGDSDFSA 1548
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 16 AAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75
+ P+P+ W ++G+ I R I L+I + D+G Y A N +
Sbjct: 199 SCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASDAGAYYVQAVNEKNGENKTSPF 258
Query: 76 I---VLHGPSYYEQLPPKITIA-AHRNL-------QLRCSAHTEELLDVAYIWTHNGVRI 124
I V +E + P I +A +R++ L C A+ + +++ W NGVR+
Sbjct: 259 IHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVRL 318
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159
T ++ G L ITN + AD G Y C
Sbjct: 319 ---------TSGLHSYGRRLTITNPTSADTGMYVC 344
>sp|Q60ZN5|SDK_CAEBR Protein sidekick homolog OS=Caenorhabditis briggsae GN=rig-4 PE=3
SV=1
Length = 2322
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 157/631 (24%), Positives = 263/631 (41%), Gaps = 65/631 (10%)
Query: 8 VTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67
+T+ C +P P VW +GN I + + F NG+L I + + D G Y+C + G
Sbjct: 477 ITLECAAAGSPPPHIVWFLNGNGIQTDSVKYDFSNGDLTIHDIRKSDEGEYTC---EISG 533
Query: 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--- 124
D + ++G S E P N++ C E W N +
Sbjct: 534 TDVKASANVQVNGDSLIEYGPADQKSLIGTNVEFSCEVAKEYARKATVEWYLNDALLPVN 593
Query: 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184
GN L + N G L+ I + GEY C V + + + + P +P
Sbjct: 594 GNSGLR----ISRNRKGSLI-IRQVGPDNTGEYRCRVTVDGREENASAMLQIIEKPAMPE 648
Query: 185 GVQVVEVHKTS----ATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDR 239
V+ E+H + ++W +G PI + I RT W + + + D
Sbjct: 649 RVRA-ELHNETMPAKVRVRWNEGFDGNEPIIKHAIEIRTMGPTGLWSDWTTAIDNIPKDD 707
Query: 240 YTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG 299
A IE+ L P ST EF+V+A N+ G G+PS PS P P AP +
Sbjct: 708 GKPCCWADIED-LRPSSTAEFRVVASNKHGPGKPSLPSSSVTMPQQPPSAAPRNVAASAR 766
Query: 300 KIGDLSISWEPLPREKQNAPNI-----------YYKIFWRKKNDTEFQSETLKEYGNVGI 348
+ + W+ P+E+Q++ + Y + W +KN T K+ N +
Sbjct: 767 SPHSVMVQWQ-QPKEEQDSGDFLGYVVRYRLAGYSSLTWNEKN------LTTKDARNTLV 819
Query: 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAIN 408
+ + EYE++V A N G G SE + + +AE P AP+ V + NSTA++
Sbjct: 820 DEL-----ITWREYEIQVAAYNKRGLGVFSESIEVTTAEGRPTQAPKNVRVKVLNSTAVS 874
Query: 409 VTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY---YLSRTTRNWALIVG-LQPDTK 464
+ + E ++ I G +G+++++WK + PE+ +Y L R + +V L+
Sbjct: 875 LEFTAPE--QQRIPGVNLGYKVQFWKGE-PEKGELYKQVILDPDRRQLSTVVNELEKFGH 931
Query: 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524
Y + V+ + G+GP+S T P+ + I + +TW +P +E
Sbjct: 932 YNLTVLCFTTPGDGPKSNILRVVTEEDTPEA-VDELSIAEVMYNGAVLTW---NPPMKEN 987
Query: 525 PII-GYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583
I+ Y +R W + + G+T + I L P RY + V+A + GDG +
Sbjct: 988 GIVTKYTIRHWASSSPDVKTKHEVD--GSTTNITIDGLQPSTRYGVDVMASTKKGDGPV- 1044
Query: 584 SPAITFQMGEEKEFKSGSPALYSASTTLLLV 614
EE +F+SG P ++L +
Sbjct: 1045 ---------EETKFESGVPPELPGRPSMLSI 1066
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 150/625 (24%), Positives = 255/625 (40%), Gaps = 74/625 (11%)
Query: 5 GGNVTIFCN--PEAAPKPKFVWKKDGNII----GSGGRRKIFENGNLLISPVSRDDSGIY 58
G NV C E A K W + ++ SG R G+L+I V D++G Y
Sbjct: 562 GTNVEFSCEVAKEYARKATVEWYLNDALLPVNGNSGLRISRNRKGSLIIRQVGPDNTGEY 621
Query: 59 SCTATNVHGMDESKGRLI-VLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELLDVAYI 116
C T V G +E+ ++ ++ P+ +P ++ H + + E D
Sbjct: 622 RCRVT-VDGREENASAMLQIIEKPA----MPERVRAELHNETMPAKVRVRWNEGFDGNEP 676
Query: 117 WTHNGVRIGNMDLNEL------ETPNINIDGG----LLEITNASFADAGEYECVVKSTVG 166
+ + I M L NI D G +I + + E+ V + G
Sbjct: 677 IIKHAIEIRTMGPTGLWSDWTTAIDNIPKDDGKPCCWADIEDLRPSSTAEFRVVASNKHG 736
Query: 167 K-----ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWT------DGATNGRPITHYKI 215
S+ T+ + P P V S +QW D + Y++
Sbjct: 737 PGKPSLPSSSVTMPQQPPSAAPRNVAASARSPHSVMVQWQQPKEEQDSGDFLGYVVRYRL 796
Query: 216 IARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSS 275
++ TW E + T ++ + L+ W YE +V A N+ G G S
Sbjct: 797 AGYSSL--TW---------NEKNLTTKDARNTLVDELITWREYEIQVAAYNKRGLGV-FS 844
Query: 276 PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP--NIYYKI-FWRKKND 332
S + T +P QAP + + ++S E E+Q P N+ YK+ FW+ + +
Sbjct: 845 ESIEVTTAEGRPTQAPKNVRVK--VLNSTAVSLEFTAPEQQRIPGVNLGYKVQFWKGEPE 902
Query: 333 T-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQ 391
E + + + ++ V E + Y + V G GP+S ++ + + ED P+
Sbjct: 903 KGELYKQVILDPDRRQLSTVVNELE-KFGHYNLTVLCFTTPGDGPKSNILRVVTEEDTPE 961
Query: 392 VAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 451
+ + + A+ +TWNP ++EN G + + I++W +P+ + + +T
Sbjct: 962 AVDELSIAEVMYNGAV-LTWNPP--MKEN--GIVTKYTIRHWASSSPDVKTKHEVDGSTT 1016
Query: 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP--PSAVHIKGINPTT 509
N I GLQP T+Y V VMA G+GP E E P+ P PS + I I+ TT
Sbjct: 1017 N-ITIDGLQPSTRYGVDVMASTKKGDGPVEETKFESGV--PPELPGRPSMLSIGDISATT 1073
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN--DTIIPVGNTLDADIV--DLSPGK 565
V + + +P F+ I R W V+ M+ ++ I V + I+ L P
Sbjct: 1074 VQL---HFTPGFDGHTAI----RQWIVEGKMADSSVFAHIFNVSSPKARSIIVTGLRPFT 1126
Query: 566 RYHMRVLAFSNGGDGRMSSPAITFQ 590
+Y +R++A + G G S P+ TF+
Sbjct: 1127 QYQLRLIAENVKGRGAPSEPSRTFE 1151
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 168/410 (40%), Gaps = 28/410 (6%)
Query: 179 PPGLPGGVQVVEVHKTSAT---IQWTDGATNGRPITHYKIIARTNWNSTW---FNVSEHV 232
PP LPG ++ + SAT + +T G I + + + +S + FNVS
Sbjct: 1054 PPELPGRPSMLSIGDISATTVQLHFTPGFDGHTAIRQWIVEGKMADSSVFAHIFNVS--- 1110
Query: 233 IGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPS 292
+ + + I L P++ Y+ ++IA N G G PS PS + T P
Sbjct: 1111 --------SPKARSIIVTGLRPFTQYQLRLIAENVKGRGAPSEPSRTFETLQTNPETPSQ 1162
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVR 352
R+ +S+SW PL N Y I +R+ ++ ++ + V
Sbjct: 1163 RLFTEPVSATSISVSWTPLLATHWNGQPKGYLIVYREVDEDNWKEVRTPALRSSEHTVTD 1222
Query: 353 IPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412
+ +T YEV V + N G ++ V + E +P +P+ + S + V W+
Sbjct: 1223 LRP---FTTYEVNVFSENVFGRSLPTDAVKARTYESVPSGSPRNIVVTAEGSKSAIVKWD 1279
Query: 413 PIELIRENIRGRLIGHRIKYWKEDN---PEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
P+ + N G +IG++++ E +ET + + + L+P T YYV +
Sbjct: 1280 PVAELSTN--GDVIGYKLRVVPERESLMADETREIDVPGQSTLMTKVSNLRPFTSYYVYM 1337
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529
AY G GPE+ L + PP + I+ V + W + P I Y
Sbjct: 1338 SAYTIVGNGPENSTPLSFETLEDVPAPPESFQCSQISEQDVRMKW--LPPGSPNGKITNY 1395
Query: 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD 579
+ W+ + S A D + GN L + LSP +Y + A ++ G+
Sbjct: 1396 VISYWKSHEPRSMAIDAQV-AGNLLMFSAMSLSPNTQYTFAIKAKNSKGE 1444
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 171/435 (39%), Gaps = 55/435 (12%)
Query: 176 VEGPPGLPGGVQVVEVHKTSATIQWTD-GATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
+E P P Q ++ + ++W G+ NG+ IT+Y I + + V G
Sbjct: 1358 LEDVPAPPESFQCSQISEQDVRMKWLPPGSPNGK-ITNYVISYWKSHEPRSMAIDAQVAG 1416
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS--------PQYNTPADK 286
+ ++ L P + Y F + A N G E + P N PA
Sbjct: 1417 NLL-MFSAMS-------LSPNTQYTFAIKAKNSKGESEEAVAEVMTSSVRLPVRNAPA-- 1466
Query: 287 PYQAPSRIGGGGGKIGDLSISW-EPLPR---EKQNAPNIYYKIFWRKKNDTEFQS-ETLK 341
P R +++I W E LPR E +P ++ ++K N+ E+ + E
Sbjct: 1467 ----PVRDTTSQHLATEITIRWDESLPRKLTEDAESPVRAVQVSYQKTNEDEWLTLEKKF 1522
Query: 342 EYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG---PESE-VVTIFSAEDMPQVAPQGV 397
EY + + + + +++ I D PESE + T+ SA P P +
Sbjct: 1523 EYSKRRAVIKHLSPN---SMFRFRIRFIGDFLESSWSPESEWMRTLPSA---PFAQPISL 1576
Query: 398 FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKY--------WKEDNPEETAVYYLSRT 449
+ + ++ + W + + IG+RI Y W+ EE AV+
Sbjct: 1577 KATPYERNSVQLEW--VVPHKSTWNSDAIGYRIHYREYPSNETWQM---EEIAVHD-PHE 1630
Query: 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTT 509
R ++ L Y +++ +N+ GEGP S P++ + + + ++ ++
Sbjct: 1631 DREEKVLAKLSTFRHYIIRMRLFNSEGEGPFSAPVFVYVGYSIPKRNLTNIITEPLSSSS 1690
Query: 510 VHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP-VGNTLDADIVDLSPGKRYH 568
+ V W P + E + +KVR V +S + + +T + + DL Y
Sbjct: 1691 IRVKWD-AWPKEDSETVTSFKVRYVPVASVLSSVSSEEEVMIVDTNECILSDLRKFAEYQ 1749
Query: 569 MRVLAFSNGGDGRMS 583
+ V ++ G+G+MS
Sbjct: 1750 ISVSPYNRAGEGKMS 1764
Score = 39.3 bits (90), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 145/381 (38%), Gaps = 26/381 (6%)
Query: 244 KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303
K ++ L P S + F++ + S S T P+ P + +
Sbjct: 1526 KRRAVIKHLSPNSMFRFRIRFIGDFLESSWSPESEWMRTLPSAPFAQPISLKATPYERNS 1585
Query: 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTE-FQSETLKEYGNVGIAVVRIPSEF-YYTE 361
+ + W + N+ I Y+I +R+ E +Q E + + ++ ++ +
Sbjct: 1586 VQLEWVVPHKSTWNSDAIGYRIHYREYPSNETWQMEEIAVHDPHEDREEKVLAKLSTFRH 1645
Query: 362 YEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN--PIELIRE 419
Y ++++ N G GP S V ++ +P+ + + +S++I V W+ P E E
Sbjct: 1646 YIIRMRLFNSEGEGPFSAPVFVYVGYSIPKRNLTNIITEPLSSSSIRVKWDAWPKE-DSE 1704
Query: 420 NIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479
+ + + + + T N ++ L+ +Y + V YN AGEG
Sbjct: 1705 TVTSFKVRYVPVASVLSSVSSEEEVMIVDT--NECILSDLRKFAEYQISVSPYNRAGEGK 1762
Query: 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKV-----RVW 534
S+ E+T P P + + +V V+W P+ +IGY V R+
Sbjct: 1763 MSQ-VREKTLEDKP-GPVGVLRFSDVLMDSVKVSWD--EPAQPNGMVIGYIVNYKGYRMQ 1818
Query: 535 E--VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592
E ++D R + D L+ G Y V A ++ G G + S +T
Sbjct: 1819 EEFKNEDQQRTSRNYF--------DSHGLAEGVTYFFSVWAETSAGKGELRSANVTIGPS 1870
Query: 593 EEKEFKSGSPALYSASTTLLL 613
++ P + S + + L
Sbjct: 1871 KDGPLPPSKPQITSGQSYVTL 1891
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 139/352 (39%), Gaps = 24/352 (6%)
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
L P+++Y + A +G G +S + T D P P D+ + W L
Sbjct: 1327 LRPFTSYYVYMSAYTIVGNGPENSTPLSFETLEDVP-APPESFQCSQISEQDVRMKW--L 1383
Query: 312 PREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGI--AVVRIPSEFYYTEYEVKVQAI 369
P N Y I + K ++ + + GN+ + A+ P+ T+Y ++A
Sbjct: 1384 PPGSPNGKITNYVISYWKSHEPRSMAIDAQVAGNLLMFSAMSLSPN----TQYTFAIKAK 1439
Query: 370 NDVGPGPESEVVTIFSAEDMP---QVAPQGVFSRGFNSTAINVTWN---PIELIRENIRG 423
N G E+ + S+ +P AP + +T I + W+ P +L E+
Sbjct: 1440 NSKGESEEAVAEVMTSSVRLPVRNAPAPVRDTTSQHLATEITIRWDESLPRKLT-EDAES 1498
Query: 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG---PE 480
+ ++ Y K + E + ++ A+I L P++ + ++ + E PE
Sbjct: 1499 PVRAVQVSYQKTNEDEWLTLEKKFEYSKRRAVIKHLSPNSMFRFRIRFIGDFLESSWSPE 1558
Query: 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDM 540
SE RT AP P ++ +V + W S IGY++ E +
Sbjct: 1559 SE--WMRTLPSAPFAQPISLKATPYERNSVQLEWVVPHKSTWNSDAIGYRIHYREYPSNE 1616
Query: 541 SRANDTII---PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITF 589
+ + I P + + + LS + Y +R+ F++ G+G S+P +
Sbjct: 1617 TWQMEEIAVHDPHEDREEKVLAKLSTFRHYIIRMRLFNSEGEGPFSAPVFVY 1668
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 16/181 (8%)
Query: 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST---AINVTWNPIE 415
+ EY++ V N G G S+V + ED P P GV F+ ++ V+W+ E
Sbjct: 1745 FAEYQISVSPYNRAGEGKMSQVREK-TLEDKP--GPVGVLR--FSDVLMDSVKVSWD--E 1797
Query: 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475
+ N G +IG+ + Y EE RT+RN+ GL Y+ V A +A
Sbjct: 1798 PAQPN--GMVIGYIVNYKGYRMQEEFKNEDQQRTSRNYFDSHGLAEGVTYFFSVWAETSA 1855
Query: 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535
G+G + K PPS I + V ++W V+ S E I+G+ ++
Sbjct: 1856 GKGELRSANVTIGPSKDGPLPPSKPQITS-GQSYVTLSWNDVANSDE---IVGHLLQAKR 1911
Query: 536 V 536
V
Sbjct: 1912 V 1912
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATN 64
G ++T+ C + W ++G ++ + + G L I + ++D G+Y C A N
Sbjct: 338 GSSLTLKCGVKKKSSMDIKWYRNGLMMNT-------QRGKLTIDRIRQEDFGLYQCEAVN 390
Query: 65 VHGMDES 71
G D S
Sbjct: 391 EAGADMS 397
>sp|Q9ERC8|DSCAM_MOUSE Down syndrome cell adhesion molecule homolog OS=Mus musculus GN=Dscam
PE=1 SV=1
Length = 2013
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/525 (25%), Positives = 235/525 (44%), Gaps = 34/525 (6%)
Query: 5 GGNVTIFCNPEAAPKPKFVWK--KDGNI-----IGSGGRRKIFENGNLLISPVSRDDSGI 57
G V + C+ E P P VWK K + I GR ++ NG+LLI V +DSG
Sbjct: 704 GKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGY 763
Query: 58 YSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117
Y C +N G D SK + + P+ P + ++ C+AH E+ + V W
Sbjct: 764 YLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQRKEMSCTAHGEKPIIVR--W 821
Query: 118 THNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKTTV 174
RI N ++ + + L+I D+G + C ++ G+ +
Sbjct: 822 EKED-RIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQL 880
Query: 175 IVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234
V+ PP P +++ +V + T++WT G PIT Y I + N + +W +
Sbjct: 881 TVQEPPD-PPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECK-NKSDSWDSAQ----- 933
Query: 235 KEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADK--PYQAPS 292
+ D A+I ++ P STY ++ A N +G EPS+ + AD+ P P
Sbjct: 934 RTKDVSPQLNSATIIDIH-PSSTYSIRMYAKNRIGKSEPSN---EITITADEAAPDGPPQ 989
Query: 293 RIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN---DTEFQSETLKEYGNVGIA 349
+ + ++W+ + QN Y+I +R+ + + +F ++ G+ +
Sbjct: 990 EVHLEPTSSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISIDTTGDSEVY 1049
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ ++F T+Y + VQA N G GP S+ + + ED+P P+ V + + +I++
Sbjct: 1050 TLDNLNKF--TQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISI 1107
Query: 410 TWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKV 469
+W+ L +E + G L G R+ YW E TT+ + GL+ T Y ++V
Sbjct: 1108 SWS--TLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQV 1165
Query: 470 MAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTW 514
+A+ AG+G SE+ RT P PP+ V + + V V+W
Sbjct: 1166 LAFTRAGDGVRSEQIFTRTKEDVP-GPPAGVKAAAASASMVFVSW 1209
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 140/618 (22%), Positives = 231/618 (37%), Gaps = 88/618 (14%)
Query: 22 FVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78
W+KDG I + I +L IS +S +G Y+C A N E + +LIV
Sbjct: 628 ITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIV- 686
Query: 79 HGPSYYEQLPPKITIAAH-------RNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131
++PPK + + + L CSA + + + ++ G +
Sbjct: 687 -------RVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFS-KGAGVPQFQPIA 738
Query: 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEV 191
L + G L I + D+G Y C V + VG +K+ + P + +
Sbjct: 739 LNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAM-----ITSY 793
Query: 192 HKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENV 251
T+ Q + II R W + +I E+ RY + E V
Sbjct: 794 PNTTLATQGQRKEMSCTAHGEKPIIVR--WEK-----EDRIINPEMARYLVSTKEVGEEV 846
Query: 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311
+ ST + + G+ ++ A Y G I L++ P
Sbjct: 847 I---STLQILPTVREDSGF---------FSCHAINSY-------GEDRGIIQLTVQEPPD 887
Query: 312 PREKQ-------------------NAPNIYYKIFWRKKNDTEFQSETLKEYG---NVGIA 349
P E + N+P Y I + K+D+ ++ K+ N
Sbjct: 888 PPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATI 947
Query: 350 VVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINV 409
+ PS + Y +++ A N +G S +TI + E P PQ V +S +I V
Sbjct: 948 IDIHPS----STYSIRMYAKNRIGKSEPSNEITITADEAAPDGPPQEVHLEPTSSQSIRV 1003
Query: 410 TWNPIELIREN--IRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467
TW + +N IRG IG+R +Y N + + + + L T+Y +
Sbjct: 1004 TWKAPKKHLQNGIIRGYQIGYR-EYSTGGNFQFNIISIDTTGDSEVYTLDNLNKFTQYGL 1062
Query: 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII 527
V A N AG GP S+ + T P PP V +P ++ ++W +S +
Sbjct: 1063 VVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQ 1122
Query: 528 GYKVRVWE--VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585
G++V W +D ++ + + +L+ D L Y ++VLAF+ GDG S
Sbjct: 1123 GFRVIYWANLIDGELGEIKN-VTTTQPSLELD--GLEKYTNYSIQVLAFTRAGDGVRSEQ 1179
Query: 586 AITFQMGEEKEFKSGSPA 603
T KE G PA
Sbjct: 1180 IFT----RTKEDVPGPPA 1193
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 7 NVTIFCNPEAAPKPKFVWKKDGN----IIGSGGRRKIFENGNLLISPVSRDDSGIYSCTA 62
++ + C P P W KD N ++ GRR IF NG+ +I V +DSG YSC A
Sbjct: 1302 DIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVKAEDSGYYSCVA 1361
Query: 63 TNVHGMDE 70
N G DE
Sbjct: 1362 NNNWGSDE 1369
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCT 61
A G V + C P+P + W KD + GR + G LLI DSG Y C
Sbjct: 236 AMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTG-LLIENSRPSDSGSYVCE 294
Query: 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+N +G + GRL V P P K+ + + L CS E D W NG
Sbjct: 295 VSNRYGTAKVIGRLYVKQ-PLKATISPRKVKSSVGSQVSLSCSVTGNE--DQELSWYRNG 351
Query: 122 VRIG---NMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG 178
+ N+ + L N+ +D + +D G Y+C V+ K+S + V V
Sbjct: 352 EILNPGKNVRITGLNHANLIMD-------HMVKSDGGAYQCFVRK--DKLSAQDYVQVVL 402
Query: 179 PPGLP 183
G P
Sbjct: 403 EDGTP 407
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRD-DSGIYSCTA 62
G + I C P W K+ N++ R+ FEN G L +S V ++ D G Y+C
Sbjct: 518 GRDTYIHCRVIGYPYYSIKWYKNANLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNV 577
Query: 63 TNVHGMDESKGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121
+ S+ + + P + + P+ +I + + + C + +L + W +G
Sbjct: 578 LVQPQLSTSQSVHVTVKVPPFIQPFEFPRFSIG--QRVFIPCVVVSGDL-PITITWQKDG 634
Query: 122 --------VRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173
V I N+D L I+N S G Y C+ ++ + ++
Sbjct: 635 RPIPASLGVTIDNIDFT-----------SSLRISNLSLMHNGNYTCIARNEAAAVEHQSQ 683
Query: 174 VIVEGPP 180
+IV PP
Sbjct: 684 LIVRVPP 690
Score = 40.4 bits (93), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FENGNLLISPVSRDDSGIYSCTA 62
G V++ C+ + W ++G I+ G +I + NL++ + + D G Y C
Sbjct: 328 GSQVSLSCSVTGNEDQELSWYRNGEILNPGKNVRITGLNHANLIMDHMVKSDGGAYQCFV 387
Query: 63 TNVHGMDESKGRLIVLHG-PSYYEQLPPKITIAAHRNLQLRCSAHTEEL------LDVAY 115
+ ++++ G P K+ ++ + L C+ L LD
Sbjct: 388 RKDKLSAQDYVQVVLEDGTPKIISAFSEKV-VSPAEPVSLVCNVKGTPLPTVTWTLDDDP 446
Query: 116 IWTHNGVRIGNMDLNELETPNINIDGGL---LEITNASFADAGEYECVVKSTVGKISTKT 172
I +G RI M I +G + L I+++ D G Y C ++ G + +
Sbjct: 447 ILKGSGHRISQM---------ITSEGNVVSYLNISSSQVRDGGVYRCTANNSAGVVLYQA 497
Query: 173 TVIVEGPPGL 182
+ V GP +
Sbjct: 498 RINVRGPASI 507
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDT 463
S++I ++W P + +IRG ++ + EDN E+ + +S + R++ L L+ T
Sbjct: 1392 SSSITLSWLPGDNGGSSIRGYIL-----QYSEDNSEQWGSFPISPSERSYRL-ENLKCGT 1445
Query: 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHV 512
Y + A N G G SE +T K PQ IN T V +
Sbjct: 1446 WYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRL 1494
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,172,119
Number of Sequences: 539616
Number of extensions: 12583719
Number of successful extensions: 27745
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 475
Number of HSP's that attempted gapping in prelim test: 20764
Number of HSP's gapped (non-prelim): 3829
length of query: 626
length of database: 191,569,459
effective HSP length: 124
effective length of query: 502
effective length of database: 124,657,075
effective search space: 62577851650
effective search space used: 62577851650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)