Query psy12061
Match_columns 626
No_of_seqs 319 out of 2408
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 17:40:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v5y_A Receptor-type tyrosine- 100.0 3.6E-56 1.2E-60 474.7 47.3 551 3-587 89-698 (731)
2 3l5h_A Interleukin-6 receptor 100.0 1.4E-51 4.8E-56 430.3 18.0 542 2-592 15-588 (589)
3 2jll_A NCAM2, neural cell adhe 100.0 6.1E-46 2.1E-50 367.3 42.2 358 2-385 12-384 (389)
4 3l5h_A Interleukin-6 receptor 100.0 2.7E-44 9.2E-49 375.2 20.5 458 87-583 9-485 (589)
5 1zlg_A Anosmin 1; insulin-like 100.0 4.4E-40 1.5E-44 345.1 44.8 415 150-595 131-633 (680)
6 2v5y_A Receptor-type tyrosine- 100.0 1.6E-39 5.5E-44 346.4 46.6 493 55-593 45-563 (731)
7 1fnf_A Fibronectin; RGD, extra 100.0 1.4E-37 4.9E-42 304.5 41.8 363 179-590 1-365 (368)
8 3t1w_A Four-domain fibronectin 100.0 7.2E-37 2.4E-41 300.2 38.4 357 179-584 2-361 (375)
9 2jll_A NCAM2, neural cell adhe 100.0 1.9E-35 6.4E-40 292.1 35.6 367 88-489 7-385 (389)
10 2nzi_A Titin; IG-domain, FNIII 100.0 3.1E-35 1.1E-39 280.1 28.1 268 2-287 16-296 (305)
11 3se4_A Interferon alpha/beta r 100.0 5.2E-36 1.8E-40 296.1 22.8 376 180-593 8-409 (414)
12 1zlg_A Anosmin 1; insulin-like 100.0 2.5E-32 8.5E-37 286.4 43.1 454 51-538 131-673 (680)
13 3b43_A Titin; I-SET IG fold, e 100.0 2.3E-31 7.8E-36 275.3 39.7 524 2-581 17-561 (570)
14 3l5i_A Interleukin-6 receptor 100.0 8.4E-33 2.9E-37 260.8 23.3 268 299-592 20-289 (290)
15 1e07_A Carcinoembryonic antige 100.0 2E-28 7E-33 258.1 51.0 499 2-583 123-633 (642)
16 3b43_A Titin; I-SET IG fold, e 100.0 1.7E-30 5.7E-35 268.9 34.4 342 3-376 114-467 (570)
17 2dtg_E Insulin receptor; IR ec 100.0 5E-33 1.7E-37 299.4 15.6 506 42-595 337-890 (897)
18 3r8q_A Fibronectin; heparin, F 100.0 9.1E-30 3.1E-34 239.7 31.9 267 284-583 17-284 (290)
19 1i1r_A GP130, interleukin-6 re 100.0 2.9E-30 9.9E-35 244.4 26.3 277 87-388 10-302 (303)
20 1tdq_A Tenascin-R; extracellul 100.0 3.5E-29 1.2E-33 235.1 31.4 260 287-583 14-277 (283)
21 2d9q_B Granulocyte colony-stim 100.0 1.4E-29 4.7E-34 240.8 26.1 281 88-391 7-311 (313)
22 1fnf_A Fibronectin; RGD, extra 100.0 5.9E-28 2E-32 236.2 38.2 350 87-482 4-359 (368)
23 3t1w_A Four-domain fibronectin 100.0 8.9E-28 3E-32 235.5 36.5 352 86-482 4-361 (375)
24 3l5i_A Interleukin-6 receptor 100.0 3.8E-28 1.3E-32 228.9 28.6 276 178-489 2-289 (290)
25 3lb6_C IL-13, interleukin-13 r 100.0 2.8E-28 9.4E-33 236.0 27.2 310 253-593 5-335 (380)
26 2rik_A Titin; I-SET IG fold, p 100.0 4.9E-28 1.7E-32 227.7 25.4 249 2-271 17-274 (284)
27 1tdq_A Tenascin-R; extracellul 100.0 5.4E-27 1.8E-31 220.1 31.2 270 173-482 8-278 (283)
28 1e07_A Carcinoembryonic antige 100.0 3.7E-25 1.3E-29 233.2 48.9 505 2-581 11-547 (642)
29 3s98_A Interferon alpha/beta r 100.0 3.8E-28 1.3E-32 228.1 21.1 286 289-593 5-302 (306)
30 3r8q_A Fibronectin; heparin, F 100.0 6.5E-27 2.2E-31 220.2 29.3 264 178-480 19-283 (290)
31 3dmk_A DOWN syndrome cell adhe 100.0 6.1E-26 2.1E-30 246.1 39.3 520 2-583 260-802 (816)
32 3dmk_A DOWN syndrome cell adhe 100.0 3.8E-27 1.3E-31 255.5 28.2 431 2-481 355-802 (816)
33 3p4l_A Neogenin; iron homeosta 100.0 5.3E-27 1.8E-31 209.3 23.6 200 388-592 2-203 (211)
34 1n26_A IL-6 receptor alpha cha 100.0 5.8E-27 2E-31 223.6 25.2 274 86-385 11-295 (325)
35 2ocw_A Polymeric-immunoglobuli 100.0 1.5E-24 5.2E-29 226.1 45.3 451 2-479 12-536 (585)
36 3kld_A Contactin 4, axcam, BIG 99.9 6.3E-27 2.2E-31 229.7 21.2 340 3-381 21-379 (384)
37 2gys_A Cytokine receptor commo 99.9 1.4E-25 4.9E-30 221.7 29.9 365 182-583 5-408 (419)
38 3se4_A Interferon alpha/beta r 99.9 1.2E-26 4.3E-31 229.0 21.9 286 289-594 9-307 (414)
39 1cfb_A Drosophila neuroglian; 99.9 9.5E-26 3.3E-30 200.1 22.7 196 388-592 4-202 (205)
40 3laf_A Deleted in colorectal c 99.9 6.1E-26 2.1E-30 225.1 22.4 341 2-376 33-392 (403)
41 3rbs_A Myomesin-1; immunoglobu 99.9 2.9E-26 9.9E-31 202.4 17.9 163 2-177 14-206 (207)
42 2yd1_A Tyrosine-protein phosph 99.9 6.5E-26 2.2E-30 202.7 20.2 175 2-184 18-206 (212)
43 1cs6_A Axonin-1; neural cell a 99.9 1E-25 3.6E-30 221.6 22.2 335 2-377 19-374 (382)
44 3f7q_A Integrin beta-4, GP150; 99.9 9.8E-26 3.4E-30 204.3 20.2 194 389-594 4-200 (234)
45 3s98_A Interferon alpha/beta r 99.9 8.2E-26 2.8E-30 212.3 19.7 281 180-490 4-302 (306)
46 2yd9_A Receptor-type tyrosine- 99.9 2.4E-25 8.1E-30 211.4 22.9 170 2-178 18-201 (304)
47 3laf_A Deleted in colorectal c 99.9 9.8E-26 3.3E-30 223.7 19.8 248 2-272 133-392 (403)
48 2ec8_A MAST/stem cell growth f 99.9 2.8E-25 9.5E-30 228.1 22.8 256 2-271 126-401 (524)
49 3oq3_B IFN-alpha/beta binding 99.9 5.2E-26 1.8E-30 218.2 15.9 258 1-271 40-320 (329)
50 2iep_A Muscle-specific kinase 99.9 1.7E-25 5.7E-30 196.8 17.6 170 2-180 19-192 (192)
51 2wim_A N-CAM 2, NCAM2, neural 99.9 5.8E-25 2E-29 207.5 21.8 248 2-272 16-275 (291)
52 1qz1_A Neural cell adhesion mo 99.9 6.6E-25 2.3E-29 207.1 22.0 249 2-271 14-280 (291)
53 3kld_A Contactin 4, axcam, BIG 99.9 1.4E-25 4.7E-30 220.2 17.5 165 2-177 217-382 (384)
54 2v5m_A Dscam; neurobiology SPL 99.9 7.8E-25 2.7E-29 215.9 22.7 342 2-376 16-380 (388)
55 3qs7_E FL cytokine receptor; i 99.9 5.9E-25 2E-29 216.9 21.5 241 2-267 60-312 (423)
56 3f7q_A Integrin beta-4, GP150; 99.9 6.2E-25 2.1E-29 199.0 20.0 222 286-534 4-230 (234)
57 2x1w_L Vascular endothelial gr 99.9 1.2E-25 4.1E-30 200.7 15.0 179 2-181 19-210 (213)
58 3p3y_A Neurofascin; IG domains 99.9 2.9E-25 1E-29 220.4 19.4 342 2-377 29-395 (404)
59 3lcy_A Titin; A-BAND, IG tande 99.9 4.2E-25 1.5E-29 195.2 18.4 168 2-178 19-196 (197)
60 2q7n_A Leukemia inhibitory fac 99.9 6E-25 2E-29 216.4 21.2 277 81-388 203-487 (488)
61 2yd6_A PTPRD protein; hydrolas 99.9 3.8E-25 1.3E-29 197.6 17.7 173 2-180 18-206 (212)
62 2wv3_A Neuroplastin; igcam, me 99.9 8.6E-25 2.9E-29 191.7 19.6 165 3-177 15-189 (190)
63 3rjd_A High affinity immunoglo 99.9 4.9E-24 1.7E-28 197.8 25.8 231 2-271 13-249 (262)
64 2r15_A Myomesin-1; sarcomeric 99.9 4.5E-25 1.5E-29 197.5 17.9 169 4-179 16-211 (212)
65 1cfb_A Drosophila neuroglian; 99.9 4E-24 1.4E-28 189.6 23.7 197 287-491 5-204 (205)
66 2vkw_A Neural cell adhesion mo 99.9 1.9E-24 6.6E-29 192.3 21.4 188 387-585 6-196 (209)
67 3qs9_E FL cytokine receptor; i 99.9 5E-25 1.7E-29 223.3 19.9 189 2-202 239-443 (527)
68 3p4l_A Neogenin; iron homeosta 99.9 4.4E-24 1.5E-28 190.3 23.7 199 285-491 2-205 (211)
69 2va4_A NCAM2, N-CAM 2, neural 99.9 2.3E-24 7.9E-29 189.5 21.2 170 2-177 16-192 (192)
70 3bpo_C Interleukin-13 receptor 99.9 1.6E-23 5.3E-28 198.9 28.1 276 289-585 5-305 (314)
71 3sgj_C Human FCG3A receptor; r 99.9 5.5E-25 1.9E-29 194.2 16.8 160 2-184 19-180 (204)
72 2a38_A Titin; Z1Z2, structural 99.9 7.6E-25 2.6E-29 192.9 17.7 169 2-177 17-194 (194)
73 2rcj_C Light chain; immunoglob 99.9 2.3E-23 7.9E-28 213.7 31.1 262 2-271 12-306 (523)
74 4fa8_A Secreted protein BARF1; 99.9 1.2E-25 4E-30 197.0 11.9 163 2-170 5-194 (203)
75 2j8h_A Titin, connectin; cardi 99.9 6.5E-25 2.2E-29 193.9 16.8 169 2-177 16-196 (197)
76 2y23_A Myomesin; structural pr 99.9 1.1E-24 3.9E-29 207.8 19.5 249 2-271 13-302 (312)
77 2ocw_A Polymeric-immunoglobuli 99.9 1.4E-22 4.8E-27 211.2 36.8 356 2-376 124-536 (585)
78 3ojm_B Fibroblast growth facto 99.9 6E-25 2.1E-29 199.7 16.5 182 2-185 31-228 (231)
79 2v5t_A NCAM2, N-CAM 2, neural 99.9 1E-24 3.5E-29 191.3 17.3 169 2-177 14-187 (189)
80 1ry7_B FGFR-3, fibroblast grow 99.9 1.3E-25 4.6E-30 216.4 12.7 258 2-272 20-318 (334)
81 2nzi_A Titin; IG-domain, FNIII 99.9 9E-24 3.1E-28 200.8 24.8 271 80-383 4-288 (305)
82 2v9r_A Roundabout homolog 1; p 99.9 1.2E-24 4.2E-29 194.7 17.6 174 2-183 21-207 (212)
83 4dep_C Interleukin-1 receptor 99.9 1.4E-24 4.7E-29 210.6 18.3 168 2-179 19-218 (349)
84 2y25_A Myomesin; structural pr 99.9 2.5E-25 8.7E-30 212.9 13.0 168 2-177 18-199 (317)
85 2c5d_C AXL oncogene, tyrosine- 99.9 3E-24 1E-28 189.1 18.7 163 2-176 14-191 (195)
86 3grw_A Fibroblast growth facto 99.9 1.4E-24 4.7E-29 198.6 16.8 182 2-185 27-225 (241)
87 2v44_A NCAM2, neural cell adhe 99.9 4.2E-24 1.5E-28 187.2 18.4 166 2-176 14-185 (189)
88 2ec8_A MAST/stem cell growth f 99.9 3.9E-24 1.3E-28 219.6 21.0 195 2-202 223-442 (524)
89 1wio_A CD4, T-cell surface gly 99.9 8.1E-24 2.8E-28 206.2 22.0 240 2-270 6-282 (363)
90 1rhf_A Tyrosine-protein kinase 99.9 6.3E-24 2.2E-28 184.8 18.8 162 2-177 14-182 (182)
91 1wio_A CD4, T-cell surface gly 99.9 2.4E-24 8.3E-29 209.9 17.7 220 2-268 108-351 (363)
92 1vca_A VCAM-D1,2, human vascul 99.9 2.3E-24 7.9E-29 189.8 15.7 176 3-181 14-200 (202)
93 1z7z_I Intercellular adhesion 99.9 2.8E-24 9.6E-29 216.3 18.4 233 2-269 98-351 (450)
94 2rik_A Titin; I-SET IG fold, p 99.9 1.1E-23 3.8E-28 197.9 21.1 168 2-177 111-283 (284)
95 2wng_A Tyrosine-protein phosph 99.9 7E-24 2.4E-28 203.4 20.0 166 2-167 15-205 (327)
96 3o4o_C Interleukin-1 receptor 99.9 9E-25 3.1E-29 211.0 13.3 170 2-180 30-222 (339)
97 3lb6_C IL-13, interleukin-13 r 99.9 2.7E-23 9.4E-28 201.0 23.1 309 154-491 9-336 (380)
98 3p3y_A Neurofascin; IG domains 99.9 9.2E-24 3.1E-28 209.6 19.8 170 2-178 234-403 (404)
99 1epf_A NCAM, protein (neural c 99.9 1.2E-23 4.1E-28 184.7 18.2 167 2-176 14-189 (191)
100 1hng_A CD2; T lymphocyte adhes 99.9 2.4E-24 8.1E-29 185.1 13.2 153 2-176 8-174 (176)
101 1bih_A Hemolin; insect immunit 99.9 9.3E-24 3.2E-28 208.8 19.4 165 2-176 224-394 (395)
102 2v5m_A Dscam; neurobiology SPL 99.9 4.5E-24 1.6E-28 210.4 16.7 246 2-271 115-379 (388)
103 3k0w_A Mucosa-associated lymph 99.9 1.6E-23 5.4E-28 187.8 18.8 159 2-180 30-204 (218)
104 2vr9_A Roundabout 1, ROBO; imm 99.9 8.3E-24 2.8E-28 189.9 16.9 176 2-179 21-207 (217)
105 3lpw_A A77-A78 domain from tit 99.9 4.6E-23 1.6E-27 181.9 21.2 186 389-587 5-191 (197)
106 3s97_C Contactin-1; carbonic a 99.9 7.8E-24 2.7E-28 187.7 16.1 166 2-177 20-200 (201)
107 2vkw_A Neural cell adhesion mo 99.9 3.6E-23 1.2E-27 184.1 20.4 194 287-489 8-202 (209)
108 1z7z_I Intercellular adhesion 99.9 9.1E-24 3.1E-28 212.5 18.2 244 2-271 11-272 (450)
109 3qs9_E FL cytokine receptor; i 99.9 3.1E-23 1.1E-27 210.1 22.0 247 2-267 60-312 (527)
110 3oq3_B IFN-alpha/beta binding 99.9 2.4E-23 8.3E-28 199.6 19.7 173 2-177 140-329 (329)
111 1itb_B Type 1 interleukin-1 re 99.9 1.1E-24 3.9E-29 208.0 10.3 167 2-177 17-201 (315)
112 1fnl_A Low affinity immunoglob 99.9 1.4E-23 4.7E-28 180.9 15.8 155 2-179 19-175 (175)
113 3jz7_A MCAR, CAR, coxsackievir 99.9 1E-23 3.4E-28 189.1 15.3 169 2-180 12-214 (214)
114 3qs7_E FL cytokine receptor; i 99.9 5.4E-24 1.8E-28 210.0 14.7 173 2-186 239-422 (423)
115 2yd9_A Receptor-type tyrosine- 99.9 1.1E-23 3.6E-28 200.0 15.9 172 2-184 120-297 (304)
116 2ibg_A CG9211-PA, GH03927P; IH 99.9 7.8E-23 2.7E-27 182.8 20.6 192 393-592 4-211 (214)
117 3bpo_C Interleukin-13 receptor 99.9 5.7E-22 2E-26 188.1 27.6 283 180-489 4-311 (314)
118 2wim_A N-CAM 2, NCAM2, neural 99.9 1.7E-23 5.9E-28 197.4 16.7 172 2-180 110-286 (291)
119 1n26_A IL-6 receptor alpha cha 99.9 1.6E-22 5.4E-27 192.8 23.2 255 2-280 18-291 (325)
120 1f2q_A High affinity immunoglo 99.9 3.1E-23 1.1E-27 179.0 16.5 157 2-181 16-174 (176)
121 2d9q_B Granulocyte colony-stim 99.9 6.9E-23 2.4E-27 194.6 20.0 269 2-287 12-310 (313)
122 1bih_A Hemolin; insect immunit 99.9 4.8E-23 1.6E-27 203.7 19.6 246 2-271 112-386 (395)
123 2o26_X MAST/stem cell growth f 99.9 6.1E-23 2.1E-27 193.3 19.4 236 2-271 24-278 (290)
124 2ny1_B T-cell surface glycopro 99.9 1.3E-23 4.5E-28 182.9 13.4 158 2-183 7-184 (184)
125 1cs6_A Axonin-1; neural cell a 99.9 2.4E-23 8.3E-28 204.7 16.2 163 2-177 219-381 (382)
126 1f97_A Junction adhesion molec 99.9 2.5E-23 8.5E-28 186.2 14.8 173 2-178 13-207 (212)
127 2y25_A Myomesin; structural pr 99.9 4.3E-23 1.5E-27 197.4 17.4 169 2-179 110-316 (317)
128 1qz1_A Neural cell adhesion mo 99.9 4.9E-23 1.7E-27 194.2 16.9 172 2-178 112-290 (291)
129 3r4d_A CEA-related cell adhesi 99.9 4.3E-23 1.5E-27 183.9 15.1 172 2-183 11-205 (208)
130 1itb_B Type 1 interleukin-1 re 99.9 6.2E-23 2.1E-27 195.9 17.1 173 2-178 115-314 (315)
131 3bp6_B Programmed cell death 1 99.9 4.1E-23 1.4E-27 182.9 14.4 167 2-180 14-195 (202)
132 2rcj_C Light chain; immunoglob 99.9 4.9E-22 1.7E-26 203.9 24.4 175 2-180 126-318 (523)
133 1i1r_A GP130, interleukin-6 re 99.9 3.2E-22 1.1E-26 189.2 21.1 228 349-592 65-300 (303)
134 3ejj_X Macrophage colony-stimu 99.9 1.2E-22 4.2E-27 191.3 18.1 243 2-272 16-272 (289)
135 2ibg_A CG9211-PA, GH03927P; IH 99.9 4.4E-22 1.5E-26 177.9 20.7 197 289-490 3-212 (214)
136 1ry7_B FGFR-3, fibroblast grow 99.9 3.2E-23 1.1E-27 199.7 14.2 180 2-183 135-332 (334)
137 1bqu_A Protein (GP130); cytoki 99.9 1.7E-22 5.7E-27 180.7 17.5 192 389-593 6-205 (215)
138 4fqp_A Poliovirus receptor; im 99.9 8E-23 2.7E-27 194.8 16.2 169 2-180 129-306 (313)
139 2o26_X MAST/stem cell growth f 99.9 2.4E-23 8.4E-28 196.1 11.9 176 2-180 103-290 (290)
140 3p2t_A Leukocyte immunoglobuli 99.9 2.9E-23 1E-27 182.6 11.5 169 2-177 16-195 (196)
141 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.8E-22 6E-27 175.9 15.7 163 2-178 10-183 (184)
142 3u83_A Poliovirus receptor-rel 99.9 2.6E-22 9E-27 193.1 18.1 247 2-271 26-310 (331)
143 3vh8_G Killer cell immunoglobu 99.9 3.8E-22 1.3E-26 190.3 18.4 243 2-270 35-297 (316)
144 3v2a_R Vascular endothelial gr 99.9 1.2E-22 4.2E-27 219.3 16.9 255 2-273 138-409 (772)
145 1ugn_A LIR1, leukocyte immunog 99.9 9.1E-23 3.1E-27 179.8 12.7 167 2-177 16-197 (198)
146 2gi7_A GPVI protein; IG-like d 99.9 6E-23 2.1E-27 178.3 11.1 145 2-166 19-168 (184)
147 1qgc_4 Protein (immunoglobulin 99.9 9.4E-22 3.2E-26 197.2 21.4 168 2-171 13-210 (438)
148 2fbo_J V1V2;, variable region- 99.9 1.3E-22 4.4E-27 186.7 13.8 172 2-175 14-249 (250)
149 1uct_A Immunoglobulin alpha FC 99.9 8.3E-23 2.8E-27 182.0 12.1 168 2-180 20-200 (218)
150 2oz4_A Intercellular adhesion 99.9 2.6E-22 8.8E-27 186.1 15.8 225 2-271 15-254 (265)
151 3mtr_A N-CAM-1, NCAM-1, neural 99.9 1.6E-21 5.6E-26 174.3 20.5 181 87-282 24-209 (215)
152 3ry4_A Low affinity immunoglob 99.9 6.2E-22 2.1E-26 169.9 17.0 152 2-176 16-169 (170)
153 2q7n_A Leukemia inhibitory fac 99.9 3.1E-20 1.1E-24 182.9 31.3 454 88-592 7-485 (488)
154 1jbj_A CD3 epsilon and gamma e 99.9 9.4E-23 3.2E-27 177.1 11.8 143 3-168 12-179 (186)
155 3ejj_X Macrophage colony-stimu 99.9 2.4E-22 8.3E-27 189.3 15.6 175 2-180 101-283 (289)
156 2gee_A Hypothetical protein; f 99.9 5.7E-21 1.9E-25 168.5 23.3 177 387-583 21-197 (203)
157 4dkd_C Macrophage colony-stimu 99.9 2.3E-22 8E-27 189.7 14.9 244 2-271 16-271 (292)
158 2y23_A Myomesin; structural pr 99.9 2.9E-22 9.9E-27 191.1 15.7 166 2-177 119-311 (312)
159 3lpw_A A77-A78 domain from tit 99.9 2.3E-21 8E-26 170.9 20.4 185 287-483 5-189 (197)
160 4fqp_A Poliovirus receptor; im 99.9 6.9E-22 2.4E-26 188.3 17.4 249 2-271 12-294 (313)
161 2if7_A SLAM family member 6; N 99.9 1.8E-21 6E-26 170.2 18.4 156 2-172 10-186 (193)
162 1nbq_A JAM, junctional adhesio 99.9 6.5E-23 2.2E-27 183.0 9.2 171 2-176 16-207 (209)
163 1qr4_A Protein (tenascin); fib 99.9 6.4E-21 2.2E-25 166.0 21.5 168 393-583 9-176 (186)
164 3mj8_L Stimulatory hamster ant 99.9 2.2E-22 7.4E-27 180.0 12.2 170 2-173 12-208 (213)
165 3v2a_R Vascular endothelial gr 99.9 3.8E-23 1.3E-27 223.3 8.5 171 2-182 236-423 (772)
166 4fom_A Poliovirus receptor-rel 99.9 3.6E-22 1.2E-26 189.9 13.8 251 2-272 11-291 (308)
167 4fom_A Poliovirus receptor-rel 99.9 4.7E-23 1.6E-27 196.0 7.6 171 2-181 126-303 (308)
168 2ifg_A High affinity nerve gro 99.9 4.4E-23 1.5E-27 199.1 7.3 172 2-180 170-347 (347)
169 1oll_A NK receptor; immune sys 99.9 3.9E-22 1.4E-26 173.8 12.4 163 2-177 15-187 (188)
170 3fl7_A Ephrin receptor; ATP-bi 99.9 2E-21 6.9E-26 192.5 18.9 213 363-593 309-533 (536)
171 4dkd_C Macrophage colony-stimu 99.9 3.3E-22 1.1E-26 188.7 12.2 178 2-183 101-286 (292)
172 2d3v_A Leukocyte immunoglobuli 99.9 3.2E-22 1.1E-26 175.9 11.2 156 2-166 16-180 (196)
173 3d9a_L Light chain of hyhel10 99.9 5.9E-22 2E-26 177.1 12.9 165 2-168 13-203 (213)
174 1lk3_L 9D7 light chain; antige 99.9 9.3E-22 3.2E-26 175.3 13.8 165 2-168 12-202 (210)
175 2gys_A Cytokine receptor commo 99.9 8.9E-20 3E-24 180.3 29.3 309 151-488 81-418 (419)
176 3fl7_A Ephrin receptor; ATP-bi 99.9 2.4E-21 8.1E-26 192.0 17.7 220 254-490 304-533 (536)
177 2dtg_E Insulin receptor; IR ec 99.9 3.2E-22 1.1E-26 215.5 12.0 285 289-593 470-788 (897)
178 1bqu_A Protein (GP130); cytoki 99.9 1.5E-21 5E-26 174.6 14.2 200 286-497 6-212 (215)
179 2ha1_A Fibronectin; beta sandw 99.9 5.2E-21 1.8E-25 168.8 16.9 176 393-583 2-194 (201)
180 1hnf_A CD2; T lymphocyte adhes 99.9 5.5E-21 1.9E-25 163.7 16.5 152 2-175 11-178 (182)
181 3mjg_X Beta-type platelet-deri 99.9 9.8E-21 3.4E-25 178.2 19.4 238 2-272 12-269 (289)
182 1qgc_4 Protein (immunoglobulin 99.9 2.4E-21 8.1E-26 194.3 15.0 174 4-178 130-338 (438)
183 3u83_A Poliovirus receptor-rel 99.9 1.3E-21 4.5E-26 188.2 12.4 169 3-183 145-325 (331)
184 3sbw_C Programmed cell death 1 99.9 6.7E-21 2.3E-25 171.6 16.2 172 2-181 13-214 (222)
185 4frw_A Poliovirus receptor-rel 99.9 2.1E-21 7.1E-26 174.5 12.7 172 2-177 11-210 (218)
186 4dep_C Interleukin-1 receptor 99.9 1.5E-21 5.2E-26 189.2 12.0 174 2-178 132-333 (349)
187 4f80_A Butyrophilin subfamily 99.9 1.5E-20 5E-25 169.6 17.4 168 2-179 16-214 (226)
188 3rjd_A High affinity immunoglo 99.9 9.9E-21 3.4E-25 175.4 16.6 150 2-168 94-249 (262)
189 1sy6_A T-cell surface glycopro 99.9 3.6E-21 1.2E-25 169.5 12.8 157 2-177 15-203 (204)
190 4i0k_A CD276 antigen; immunogl 99.9 2.8E-21 9.7E-26 174.0 12.4 173 1-181 6-209 (222)
191 3n06_B PRL-R, prolactin recept 99.9 9.2E-20 3.1E-24 161.9 21.9 199 286-492 2-206 (210)
192 1p6f_A NKP46, natural cytotoxi 99.8 4.9E-21 1.7E-25 173.0 13.3 169 2-183 18-196 (242)
193 3e0g_A Leukemia inhibitory fac 99.8 6.7E-19 2.3E-23 171.9 29.1 412 136-593 39-481 (483)
194 1igt_B IGG2A intact antibody - 99.8 2.4E-20 8E-25 187.0 19.2 170 2-175 12-216 (444)
195 2pet_A Lutheran blood group gl 99.8 1.6E-21 5.3E-26 177.0 9.7 170 2-176 12-229 (231)
196 1za6_B IGG heavy chain; immuno 99.8 5.2E-21 1.8E-25 184.5 13.6 168 2-172 12-211 (344)
197 3n06_B PRL-R, prolactin recept 99.8 1.2E-19 4.2E-24 161.0 21.4 194 389-593 2-204 (210)
198 2gee_A Hypothetical protein; f 99.8 3.5E-19 1.2E-23 157.0 23.7 174 290-482 25-198 (203)
199 1igy_B IGG1 intact antibody MA 99.8 2.1E-21 7.1E-26 194.0 10.5 170 2-175 11-212 (434)
200 3auv_A SC-DSFV derived from th 99.8 2.3E-20 8E-25 173.6 16.7 181 2-182 24-258 (276)
201 2ha1_A Fibronectin; beta sandw 99.8 8.1E-20 2.8E-24 161.1 19.4 176 290-482 2-195 (201)
202 3tv3_L PGT128 light chain, IG 99.8 3.1E-21 1.1E-25 172.1 9.9 167 2-172 12-205 (211)
203 1f3r_B FV antibody fragment; I 99.8 6.1E-21 2.1E-25 175.5 12.1 180 2-183 12-250 (257)
204 1ccz_A Protein (CD58); LFA-3, 99.8 3.2E-20 1.1E-24 158.0 15.7 148 2-174 7-167 (171)
205 1q0x_L FAB 9B1, light chain; a 99.8 1.2E-20 4E-25 168.5 13.3 169 2-171 12-208 (212)
206 1cd9_B G-CSF-R, protein (G-CSF 99.8 8.5E-20 2.9E-24 162.9 18.9 194 389-592 3-212 (215)
207 2ghw_B Anti-SARS SCFV antibody 99.8 2.1E-20 7.1E-25 171.2 15.1 174 2-177 14-241 (247)
208 1dr9_A B7-1 (CD80), T lymphocy 99.8 1.6E-20 5.4E-25 166.1 13.4 161 2-174 6-197 (201)
209 3mj6_A Junctional adhesion mol 99.8 1.7E-20 5.9E-25 174.3 14.2 170 2-179 17-238 (268)
210 3mtr_A N-CAM-1, NCAM-1, neural 99.8 3.4E-20 1.2E-24 165.7 14.7 169 2-181 30-212 (215)
211 2c1o_A IGK-C protein; FAB frag 99.8 1.7E-20 5.8E-25 172.7 12.8 165 2-168 50-245 (254)
212 1nqb_A Single-chain antibody f 99.8 5E-20 1.7E-24 169.0 15.7 176 2-178 12-233 (256)
213 3o4o_C Interleukin-1 receptor 99.8 3.1E-21 1.1E-25 186.2 7.7 174 2-176 132-333 (339)
214 1gsm_A Madcam-1, mucosal addre 99.8 8E-20 2.7E-24 157.6 15.5 160 2-168 19-195 (210)
215 1qr4_A Protein (tenascin); fib 99.8 5.7E-19 2E-23 153.6 21.2 178 287-489 6-183 (186)
216 3r06_A Anti-mouse CD3epsilon a 99.8 3.2E-20 1.1E-24 165.8 13.6 165 2-168 13-203 (213)
217 2xzc_L FAB A.17 light chain; i 99.8 2.8E-20 9.6E-25 166.5 13.2 165 2-168 12-205 (216)
218 1iga_A IGA1; immunoglobulin; N 99.8 1.4E-18 4.8E-23 175.4 27.1 163 2-167 13-215 (475)
219 4dzb_B Vbeta2 (MAIT T cell rec 99.8 1.9E-20 6.5E-25 171.4 12.2 167 2-169 13-222 (246)
220 1c1e_H Catalytic antibody 1E9 99.8 1.5E-20 5.2E-25 168.6 11.3 169 2-174 12-216 (219)
221 1nkr_A P58-CL42 KIR; inhibitor 99.8 6E-20 2E-24 162.0 14.7 152 2-165 19-184 (201)
222 3nl4_L Antigen binding fragmen 99.8 2.2E-20 7.7E-25 166.8 11.8 157 2-162 13-198 (213)
223 2oz4_A Intercellular adhesion 99.8 2.1E-20 7.3E-25 173.1 12.0 151 2-179 110-265 (265)
224 3s96_B 3B5H10 FAB light chain; 99.8 2E-20 6.8E-25 167.9 11.0 169 2-172 12-214 (218)
225 3uzq_A Anti-dengue MAB 4E11; d 99.8 7E-20 2.4E-24 168.2 14.9 182 2-183 13-249 (253)
226 1mju_H Immunoglobulin MS6-12; 99.8 1.7E-20 5.7E-25 168.8 10.4 178 2-183 12-222 (227)
227 3bkj_L WO2 IGG2A FAB fragment 99.8 3.9E-20 1.3E-24 169.7 12.6 164 2-167 46-240 (252)
228 3eow_R Poliovirus receptor; im 99.8 1.1E-20 3.8E-25 169.8 8.4 177 2-184 11-216 (221)
229 2p1y_A Bispecific alpha/beta T 99.8 1.1E-19 3.8E-24 165.4 15.0 161 2-165 12-222 (238)
230 2zg1_A Sialic acid-binding IG- 99.8 1.4E-19 4.7E-24 161.9 15.0 162 2-175 12-210 (214)
231 3d9a_H Heavy chain of hyhel10 99.8 4.9E-20 1.7E-24 164.0 11.9 165 2-171 12-207 (210)
232 2wqr_A IG epsilon chain C regi 99.8 6.4E-21 2.2E-25 182.2 6.6 162 6-168 25-204 (323)
233 2dru_A Chimera of CD48 antigen 99.8 2.2E-19 7.5E-24 154.3 15.5 150 2-174 11-177 (180)
234 1igt_B IGG2A intact antibody - 99.8 1.7E-20 5.9E-25 188.0 9.9 169 2-174 135-337 (444)
235 3sob_L Antibody light chain; b 99.8 7.3E-20 2.5E-24 166.6 13.1 169 2-171 36-229 (237)
236 4fmk_A Poliovirus receptor-rel 99.8 5.1E-20 1.8E-24 166.3 11.9 172 2-175 13-214 (225)
237 3esu_F Antibody 14B7* light ch 99.8 1.4E-19 4.7E-24 166.1 14.8 162 2-163 16-231 (250)
238 1moe_A Anti-CEA MAB T84.66; an 99.8 8.3E-20 2.9E-24 166.5 13.3 162 2-163 13-219 (240)
239 3pv7_A B7-H6, IG-like domain-c 99.8 1E-19 3.5E-24 166.8 13.9 172 2-177 15-225 (248)
240 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 3.9E-20 1.3E-24 166.3 10.2 169 2-174 12-219 (222)
241 3gkz_A Anti-methamphetamine si 99.8 3E-19 1E-23 164.5 16.2 181 2-183 20-254 (257)
242 2j6e_L IGM, FAB light chain; a 99.8 3.3E-20 1.1E-24 168.5 9.5 170 2-172 31-229 (234)
243 3umt_A SCFV heavy chain and li 99.8 1.7E-19 5.9E-24 165.9 14.4 177 2-180 14-247 (256)
244 1nfd_E H57 FAB; complex (immun 99.8 7.7E-21 2.6E-25 169.7 5.1 165 2-169 11-203 (212)
245 1hzh_H IGG, immunoglobulin hea 99.8 9.4E-19 3.2E-23 176.0 20.9 172 2-176 12-227 (457)
246 2wng_A Tyrosine-protein phosph 99.8 9.3E-20 3.2E-24 174.7 12.6 160 2-168 129-309 (327)
247 1b6u_A KIR2DL3, P58 killer cel 99.8 1.5E-19 5.1E-24 164.4 13.0 170 2-181 18-204 (257)
248 1cd9_B G-CSF-R, protein (G-CSF 99.8 3.7E-18 1.3E-22 152.2 21.7 195 286-491 3-214 (215)
249 2znx_A SCFV; fluorotryptohpan, 99.8 2.7E-19 9.2E-24 162.9 13.5 162 2-164 13-222 (242)
250 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 2.6E-19 8.9E-24 164.5 13.5 174 2-178 15-248 (256)
251 3nl4_H Antigen binding fragmen 99.8 4E-19 1.4E-23 158.7 14.3 167 2-175 11-211 (215)
252 1qok_A MFE-23 recombinant anti 99.8 4E-19 1.4E-23 165.7 14.4 176 2-180 38-270 (282)
253 1svz_A Immunoglobulin;, single 99.8 8E-19 2.7E-23 160.6 15.5 162 2-164 13-228 (247)
254 3ux9_B SCFV antibody; five hel 99.8 1E-18 3.4E-23 160.9 16.3 163 2-165 14-236 (256)
255 3bqu_C 3H6 FAB light chain; be 99.8 1.3E-20 4.6E-25 170.9 3.5 164 2-167 35-224 (233)
256 2vol_A Murine IGG FC; FC, zinc 99.8 5.8E-20 2E-24 162.7 7.4 161 2-167 15-197 (207)
257 1pz5_B Heavy chain of FAB (SYA 99.8 3.4E-19 1.2E-23 159.9 11.9 168 2-173 12-216 (220)
258 3pl6_D MBP peptide / T-cell re 99.8 4.9E-19 1.7E-23 164.2 12.9 164 2-167 38-241 (268)
259 4ei6_B Vbeta16 XV19 type II na 99.8 7.5E-19 2.6E-23 160.6 13.9 164 2-167 14-219 (245)
260 3nfj_J T cell receptor beta ch 99.8 4.3E-19 1.5E-23 162.2 11.9 166 2-168 13-220 (245)
261 1op3_H FAB 2G12, heavy chain; 99.8 3.5E-19 1.2E-23 160.1 11.1 163 2-168 12-215 (225)
262 3e0g_A Leukemia inhibitory fac 99.8 4.4E-18 1.5E-22 166.1 19.6 271 86-388 203-482 (483)
263 3mjg_X Beta-type platelet-deri 99.8 4.2E-19 1.4E-23 167.0 11.9 171 2-184 107-284 (289)
264 3bae_H WO2 IGG2A FAB fragment 99.8 3.7E-19 1.3E-23 160.3 10.9 168 2-173 12-221 (228)
265 2rgs_A I, IG gamma-2B heavy ch 99.8 6.5E-20 2.2E-24 163.8 5.3 161 2-167 23-205 (218)
266 3vh8_G Killer cell immunoglobu 99.8 5.6E-19 1.9E-23 168.3 12.0 169 2-180 130-315 (316)
267 1dee_B IGM RF 2A2; FAB-IBP com 99.8 3.8E-18 1.3E-22 153.0 16.0 168 2-172 12-221 (223)
268 3juy_B 3B3 single chain varian 99.8 2.2E-18 7.5E-23 158.5 14.6 174 2-176 18-255 (256)
269 3d85_D IL-12B, interleukin-12 99.8 2.2E-17 7.4E-22 154.0 21.3 256 93-383 18-303 (306)
270 3d85_D IL-12B, interleukin-12 99.8 3E-17 1E-21 153.0 22.2 245 2-277 18-301 (306)
271 2gjj_A A21 single-chain antibo 99.8 1.6E-18 5.4E-23 159.7 13.5 162 2-164 17-239 (264)
272 1hzh_H IGG, immunoglobulin hea 99.8 7E-19 2.4E-23 176.9 11.6 168 2-174 144-346 (457)
273 3q5y_A TCR N15 beta; IG, T cel 99.8 2.9E-18 1E-22 156.1 14.6 163 2-167 14-213 (240)
274 1igy_B IGG1 intact antibody MA 99.8 5.6E-20 1.9E-24 183.6 3.2 163 2-168 131-321 (434)
275 4go6_B HCF C-terminal chain 1; 99.8 9.6E-19 3.3E-23 156.9 10.9 157 422-584 19-193 (232)
276 1l6x_A Immunoglobulin gamma-1 99.8 4.2E-19 1.4E-23 157.3 8.4 160 3-167 16-197 (207)
277 2fbj_H IGA-kappa J539 FAB (hea 99.8 3.4E-18 1.2E-22 153.0 14.2 165 2-169 12-212 (220)
278 3liz_H 4C3 monoclonal antibody 99.8 1.6E-18 5.3E-23 158.8 12.0 177 2-182 12-224 (253)
279 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 3.5E-18 1.2E-22 158.2 14.3 163 2-164 27-254 (268)
280 2xqy_G A13-D6.3 monoclonal ant 99.8 1.7E-18 5.9E-23 158.6 11.8 163 2-168 18-215 (261)
281 3fku_X Neutralizing antibody F 99.8 2.3E-18 7.8E-23 160.2 12.3 181 2-183 12-255 (280)
282 1iga_A IGA1; immunoglobulin; N 99.8 1.6E-17 5.4E-22 167.8 18.7 171 3-176 139-343 (475)
283 3m8o_H Immunoglobulin A1 heavy 99.8 1.2E-17 4.1E-22 149.8 15.6 164 2-168 12-213 (221)
284 3omz_A Human vdelta1 gamma del 99.8 2.7E-18 9.2E-23 158.2 11.2 178 2-181 14-253 (259)
285 1i1c_A IGG2A, IG gamma-2A chai 99.8 7.2E-19 2.5E-23 158.7 7.1 161 2-167 29-211 (239)
286 2gki_A Nuclease; anti-DNA anti 99.8 5E-18 1.7E-22 158.8 12.8 179 2-180 34-274 (291)
287 1hxm_B Gamma-delta T-cell rece 99.7 5.7E-18 2E-22 154.0 12.5 172 2-176 13-227 (242)
288 2wqr_A IG epsilon chain C regi 99.7 9E-19 3.1E-23 167.3 7.2 162 2-167 125-309 (323)
289 1dn0_B IGM-kappa cold agglutin 99.7 1.7E-17 5.9E-22 149.6 15.2 173 2-177 12-226 (232)
290 1zvo_C Myeloma immunoglobulin 99.7 7.2E-16 2.5E-20 156.5 28.9 169 2-172 12-226 (512)
291 2ed9_A Netrin receptor DCC; tu 99.7 6.6E-18 2.3E-22 135.6 11.1 120 468-592 3-122 (124)
292 3qib_D 2B4 beta chain; IG doma 99.7 4.2E-18 1.4E-22 158.0 11.3 164 2-167 39-244 (270)
293 3lqm_A Interleukin-10 receptor 99.7 1.3E-16 4.4E-21 139.2 19.9 180 393-593 4-195 (201)
294 3knb_B Obscurin-like protein 1 99.7 2.6E-18 8.9E-23 132.5 8.0 80 2-81 25-107 (107)
295 1c5d_H Monoclonal antibody aga 99.7 1.3E-17 4.5E-22 148.6 13.1 162 2-172 12-210 (215)
296 4go6_B HCF C-terminal chain 1; 99.7 7.2E-18 2.5E-22 151.3 10.6 169 315-493 17-204 (232)
297 2edx_A Protein tyrosine phosph 99.7 2.9E-17 1E-21 134.0 13.3 132 373-506 1-133 (134)
298 2w59_A IGY FCU3-4; immunoglobu 99.7 2.8E-18 9.4E-23 154.6 7.7 161 3-167 26-217 (231)
299 2wbj_D OB TCR; transmembrane, 99.7 1.2E-17 4.1E-22 155.5 12.2 166 2-168 36-246 (279)
300 3o3u_N Maltose-binding peripla 99.7 1.7E-17 6E-22 172.3 12.7 164 2-167 378-566 (581)
301 3bn9_D E2 FAB heavy chain; ant 99.7 9.8E-18 3.4E-22 152.7 9.4 163 2-168 12-220 (257)
302 2dbj_A Proto-oncogene tyrosine 99.7 9.8E-17 3.4E-21 128.2 14.1 116 476-593 1-117 (124)
303 3to4_D NKT vbeta2 (mouse varia 99.7 1.5E-17 5E-22 152.5 10.5 164 2-166 13-218 (253)
304 2edx_A Protein tyrosine phosph 99.7 1.7E-16 5.7E-21 129.5 15.0 118 476-594 1-118 (134)
305 3qt2_A Interleukin-5 receptor 99.7 2E-14 6.9E-19 133.5 29.7 272 288-584 12-306 (317)
306 1wj3_A KIAA1496 protein; beta 99.7 7.9E-17 2.7E-21 126.5 11.3 110 476-593 1-110 (117)
307 2ee2_A Contactin-1; neural cel 99.7 2.2E-16 7.6E-21 125.3 14.0 114 476-595 1-114 (119)
308 1wfo_A Sidekick 2; FN3, cell a 99.7 5.4E-17 1.8E-21 131.4 10.4 122 468-594 2-124 (130)
309 3lqm_A Interleukin-10 receptor 99.7 7E-16 2.4E-20 134.6 17.5 182 289-491 3-196 (201)
310 3qhz_H Human monoclonal antibo 99.7 9.7E-17 3.3E-21 144.9 12.3 172 2-176 12-227 (232)
311 1bec_A 14.3.D T cell antigen r 99.7 6.2E-17 2.1E-21 146.8 11.0 162 2-166 11-211 (238)
312 1axi_B HGHBP, growth hormone r 99.7 4.5E-16 1.6E-20 139.4 16.3 191 389-592 28-234 (236)
313 1wfo_A Sidekick 2; FN3, cell a 99.7 8.2E-17 2.8E-21 130.3 10.3 124 366-494 3-127 (130)
314 1oga_E TRBC1, T-cell receptor 99.7 2.2E-16 7.4E-21 144.5 14.2 165 2-168 15-219 (252)
315 2ed9_A Netrin receptor DCC; tu 99.7 1E-16 3.5E-21 128.6 10.6 121 365-490 3-123 (124)
316 2ee2_A Contactin-1; neural cel 99.7 4E-16 1.4E-20 123.8 13.7 116 373-494 1-116 (119)
317 1zvo_C Myeloma immunoglobulin 99.7 3E-15 1E-19 151.9 23.5 164 4-169 149-388 (512)
318 3tv3_H PGT128 heavy chain, IG 99.7 9.9E-17 3.4E-21 145.3 11.2 172 2-176 12-235 (239)
319 1axi_B HGHBP, growth hormone r 99.7 1.3E-15 4.6E-20 136.4 17.1 194 286-490 28-235 (236)
320 3n1f_C Cell adhesion molecule- 99.7 4.8E-16 1.6E-20 118.6 12.1 99 492-591 3-101 (102)
321 2dbj_A Proto-oncogene tyrosine 99.7 6E-16 2E-20 123.6 13.1 119 373-493 1-120 (124)
322 3knb_A Titin; IG-like, titin, 99.7 1.5E-16 5.1E-21 121.1 8.8 77 2-78 17-98 (100)
323 2dlh_A Receptor-type tyrosine- 99.7 2.8E-16 9.4E-21 125.5 10.7 115 476-594 1-115 (121)
324 1za6_B IGG heavy chain; immuno 99.7 4.4E-17 1.5E-21 157.0 7.1 157 2-167 132-330 (344)
325 3shs_A HOC head outer capsid p 99.7 5.3E-15 1.8E-19 127.5 18.4 154 3-177 15-182 (304)
326 1ypz_F T-cell receptor gamma c 99.7 2.1E-16 7.3E-21 142.1 9.9 163 2-168 13-217 (230)
327 1x4y_A Biregional cell adhesio 99.7 1.3E-15 4.3E-20 119.7 13.0 105 489-594 4-108 (114)
328 1wj3_A KIAA1496 protein; beta 99.7 8.2E-16 2.8E-20 120.7 11.8 114 373-494 1-114 (117)
329 2lu7_A Obscurin-like protein 1 99.7 3.5E-16 1.2E-20 113.9 8.9 72 2-78 8-82 (84)
330 1x5i_A Neogenin; RGM binding, 99.7 9.1E-16 3.1E-20 122.6 11.9 106 473-586 2-113 (126)
331 1ow0_A IG alpha-1 chain C regi 99.6 6.5E-18 2.2E-22 150.3 -1.1 159 2-166 16-199 (214)
332 1he7_A High affinity nerve gro 99.6 3.3E-16 1.1E-20 121.9 8.2 81 3-83 13-103 (126)
333 1x5h_A Neogenin; RGM binding, 99.6 6.1E-16 2.1E-20 125.6 10.1 115 476-593 1-115 (132)
334 2cqv_A MLCK, myosin light chai 99.6 5.8E-16 2E-20 121.9 9.7 84 2-85 19-105 (114)
335 2aty_A Complement receptor chi 99.6 7.8E-16 2.7E-20 149.4 12.4 163 2-166 180-361 (376)
336 2ede_A Netrin receptor DCC; tu 99.6 3.6E-15 1.2E-19 117.4 13.9 105 487-594 2-108 (114)
337 2dlh_A Receptor-type tyrosine- 99.6 2.8E-16 9.5E-21 125.5 7.5 118 373-494 1-118 (121)
338 3u2s_H PG9 heavy chain; greek 99.6 8.7E-16 3E-20 139.5 11.7 172 2-176 11-236 (248)
339 1uen_A KIAA0343 protein; immun 99.6 6.6E-16 2.2E-20 124.1 9.5 112 481-593 2-118 (125)
340 1mq8_A ICAM-1, intercellular a 99.6 3.8E-17 1.3E-21 149.8 2.3 172 2-182 98-286 (291)
341 3knb_B Obscurin-like protein 1 99.6 1.2E-15 4E-20 117.6 10.2 91 80-180 13-107 (107)
342 3n9g_H FAB fragment of MAB CR4 99.6 1E-15 3.6E-20 137.8 11.6 171 2-177 12-224 (230)
343 2edj_A Roundabout homolog 2; K 99.6 9.5E-16 3.3E-20 117.5 9.1 80 2-81 20-100 (100)
344 4doh_B Interleukin-20 receptor 99.6 3.3E-14 1.1E-18 124.0 19.5 184 393-593 9-200 (206)
345 1va9_A DOWN syndrome cell adhe 99.6 3.1E-15 1.1E-19 119.6 11.9 112 481-593 3-116 (122)
346 2yuz_A Myosin-binding protein 99.6 8.8E-16 3E-20 116.8 8.0 77 2-82 19-98 (100)
347 1wfn_A Sidekick 2; FN3, cell a 99.6 1.7E-15 5.9E-20 120.2 9.9 106 476-586 1-106 (119)
348 1uen_A KIAA0343 protein; immun 99.6 3.9E-15 1.3E-19 119.5 12.0 115 378-494 2-122 (125)
349 1x3d_A Fibronectin type-III do 99.6 3.9E-15 1.3E-19 117.9 11.8 111 476-593 1-111 (118)
350 3g9v_A Interleukin 22 receptor 99.6 2.5E-15 8.7E-20 131.3 11.6 179 393-584 10-204 (211)
351 2eo9_A Roundabout homolog 1; b 99.6 6.4E-16 2.2E-20 122.6 7.1 96 2-97 20-117 (118)
352 1x5h_A Neogenin; RGM binding, 99.6 8E-16 2.7E-20 124.9 7.7 124 373-500 1-130 (132)
353 3irg_B Obscurin-like protein 1 99.6 1.3E-15 4.4E-20 118.6 8.0 80 2-81 25-107 (107)
354 1iam_A ICAM-1, CD54, intercell 99.6 1.5E-14 5.2E-19 121.7 15.0 151 2-166 11-166 (185)
355 4acp_A IG gamma-1 chain C regi 99.6 6.7E-16 2.3E-20 138.6 7.2 161 4-166 38-217 (240)
356 3v6o_A Leptin receptor; recept 99.6 7.5E-14 2.5E-18 122.5 20.1 183 393-586 3-199 (206)
357 1ypz_E T cell receptor delta, 99.6 6.9E-15 2.4E-19 129.6 13.5 156 2-168 13-199 (207)
358 2lvc_A Obscurin-like protein 1 99.6 8.6E-16 2.9E-20 113.8 6.1 71 2-77 18-91 (91)
359 1x5z_A Receptor-type tyrosine- 99.6 1.8E-15 6.2E-20 119.4 8.3 115 373-497 1-115 (115)
360 4doh_R Interleukin-20 receptor 99.6 3.9E-14 1.3E-18 124.9 17.6 188 393-593 11-213 (221)
361 1wis_A KIAA1514 protein; FNIII 99.6 3.2E-15 1.1E-19 119.2 9.7 114 478-594 3-119 (124)
362 2e7h_A Ephrin type-B receptor 99.6 1E-14 3.6E-19 113.4 12.1 102 487-594 2-103 (109)
363 1x5z_A Receptor-type tyrosine- 99.6 4.5E-15 1.5E-19 117.1 10.1 109 476-594 1-109 (115)
364 1eer_B Epobp, erythropoietin r 99.6 3E-14 1E-18 127.4 16.6 188 393-592 23-222 (227)
365 2edd_A Netrin receptor DCC; tu 99.6 1.6E-14 5.3E-19 114.4 12.8 116 377-494 5-121 (123)
366 3qt2_A Interleukin-5 receptor 99.6 2.3E-12 7.8E-17 119.8 29.2 277 179-486 11-313 (317)
367 2crm_A Fibronectin type-III do 99.6 1.1E-14 3.6E-19 115.8 11.5 111 476-593 1-113 (120)
368 3sob_H Antibody heavy chain, l 99.6 9.5E-15 3.3E-19 133.8 12.9 170 2-176 35-249 (256)
369 1x5f_A Neogenin; RGM binding, 99.6 1.3E-14 4.3E-19 115.5 12.0 111 477-593 2-113 (120)
370 2cqv_A MLCK, myosin light chai 99.6 9E-15 3.1E-19 115.1 11.0 97 81-186 7-107 (114)
371 4doh_R Interleukin-20 receptor 99.6 4.3E-14 1.5E-18 124.6 16.5 192 289-491 10-214 (221)
372 2yd1_A Tyrosine-protein phosph 99.6 2.1E-14 7.3E-19 127.6 14.8 170 81-272 6-190 (212)
373 3knb_A Titin; IG-like, titin, 99.6 6.7E-15 2.3E-19 111.9 9.8 89 83-178 7-99 (100)
374 3qp3_A Titin; I-SET IG-like, s 99.6 4E-15 1.4E-19 114.8 8.7 79 2-80 20-101 (103)
375 2bk8_A Connectin, M1, titin he 99.6 8.3E-15 2.8E-19 111.5 10.3 77 2-78 13-93 (97)
376 2kkq_A Myotilin; unknown funct 99.6 4.3E-15 1.5E-19 116.9 8.9 81 2-82 27-112 (116)
377 1waa_A Titin; metal binding pr 99.6 4.1E-15 1.4E-19 111.1 8.4 73 2-79 17-92 (93)
378 1x5g_A Neogenin; RGM binding, 99.6 1.4E-14 4.7E-19 114.5 11.9 107 478-593 1-109 (116)
379 1gxe_A Myosin binding protein 99.6 1.7E-15 5.7E-20 122.2 6.6 77 2-78 30-138 (139)
380 2djs_A Ephrin type-B receptor 99.6 1.6E-14 5.4E-19 112.3 11.9 101 487-594 2-102 (108)
381 2e7c_A Myosin-binding protein 99.6 8.5E-15 2.9E-19 116.0 10.4 79 2-81 36-117 (118)
382 1g1c_A Immunoglobulin-like dom 99.6 5.6E-15 1.9E-19 113.1 9.1 77 2-78 17-97 (99)
383 1va9_A DOWN syndrome cell adhe 99.6 6.3E-15 2.2E-19 117.7 9.7 116 378-495 3-121 (122)
384 1x3d_A Fibronectin type-III do 99.6 1.5E-14 5.2E-19 114.5 11.7 114 373-494 1-115 (118)
385 2edd_A Netrin receptor DCC; tu 99.6 2.4E-14 8.2E-19 113.3 12.7 111 478-594 3-117 (123)
386 1wwb_X Protein (brain derived 99.6 6.5E-15 2.2E-19 113.0 9.1 79 3-81 14-100 (103)
387 2ckn_A Basic fibroblast growth 99.6 4.9E-15 1.7E-19 112.0 8.3 74 2-77 21-94 (95)
388 1eer_B Epobp, erythropoietin r 99.6 1.4E-13 4.9E-18 122.9 19.3 191 290-491 23-224 (227)
389 3n1f_C Cell adhesion molecule- 99.6 2E-14 6.7E-19 109.6 11.6 99 389-489 3-102 (102)
390 1x4z_A Biregional cell adhesio 99.6 2.2E-14 7.6E-19 114.0 12.4 111 480-593 5-115 (121)
391 2c1o_A IGK-C protein; FAB frag 99.6 8.1E-15 2.8E-19 134.5 11.3 130 50-183 11-155 (254)
392 2ed7_A Netrin receptor DCC; tu 99.6 3E-14 1E-18 113.1 12.5 102 485-592 10-111 (119)
393 2cr3_A Basic fibroblast growth 99.6 7.2E-15 2.5E-19 112.0 8.5 78 2-81 15-92 (99)
394 2kdg_A Myotilin; immonoglobuli 99.6 8.9E-15 3.1E-19 112.1 9.0 78 2-79 17-98 (100)
395 1mq8_A ICAM-1, intercellular a 99.6 1.3E-14 4.4E-19 133.1 11.6 187 2-202 11-212 (291)
396 3mlr_H Human monoclonal anti-H 99.6 9.9E-15 3.4E-19 130.8 10.3 167 2-173 12-221 (226)
397 2yd6_A PTPRD protein; hydrolas 99.6 1.1E-13 3.7E-18 123.0 17.0 172 80-273 6-195 (212)
398 2haz_A N-CAM 1, neural cell ad 99.6 1.7E-14 5.8E-19 111.1 10.2 99 489-592 3-103 (105)
399 3iu4_H CHP3 FAB heavy chain; a 99.6 7.1E-15 2.4E-19 134.7 9.4 169 2-175 12-221 (263)
400 1x5l_A Ephrin type-A receptor 99.6 2.1E-14 7.1E-19 112.4 10.8 103 485-594 3-105 (111)
401 3puc_A Titin; I-SET IG-like do 99.6 9.4E-15 3.2E-19 111.8 8.6 77 2-78 18-97 (99)
402 1x5g_A Neogenin; RGM binding, 99.6 2.4E-14 8.3E-19 113.0 11.1 111 375-494 1-113 (116)
403 2yr3_A Myosin light chain kina 99.6 4E-15 1.4E-19 113.8 6.2 76 2-77 23-98 (99)
404 2a38_A Titin; Z1Z2, structural 99.6 1.2E-13 4.2E-18 120.9 16.6 172 80-271 5-185 (194)
405 1wit_A Twitchin 18TH IGSF modu 99.5 6.5E-15 2.2E-19 111.0 6.9 76 2-77 14-92 (93)
406 1x4y_A Biregional cell adhesio 99.5 4.6E-14 1.6E-18 110.7 12.0 106 387-494 5-111 (114)
407 3kvq_A Vascular endothelial gr 99.5 9E-15 3.1E-19 114.0 7.6 81 2-82 22-103 (108)
408 2yrz_A Integrin beta-4; GP150, 99.5 1.2E-14 4.3E-19 115.1 8.5 110 476-591 1-110 (118)
409 4doh_B Interleukin-20 receptor 99.5 1.9E-13 6.6E-18 119.1 16.3 184 289-489 8-199 (206)
410 1u2h_A APEG-1, aortic preferen 99.5 1.8E-14 6.2E-19 110.2 8.6 77 2-78 17-97 (99)
411 1nct_A Titin; cell adhesion, g 99.5 3E-15 1E-19 115.6 4.2 76 2-77 26-104 (106)
412 2edy_A Receptor-type tyrosine- 99.5 1.3E-14 4.3E-19 111.9 7.7 100 487-592 2-101 (103)
413 1fhg_A Telokin; immunoglobulin 99.5 1.8E-14 6.2E-19 120.1 9.1 86 2-87 53-142 (154)
414 1x5j_A Neogenin; RGM binding, 99.5 5E-14 1.7E-18 109.5 10.9 106 387-494 5-111 (113)
415 2dm2_A Palladin; beta-sandwich 99.5 1.5E-14 5.3E-19 112.9 8.0 81 2-82 20-105 (110)
416 2ede_A Netrin receptor DCC; tu 99.5 1.2E-13 4E-18 108.7 13.0 106 385-494 3-111 (114)
417 1v5j_A KIAA1355 protein, RSGI 99.5 1.4E-14 4.8E-19 110.1 7.3 94 493-592 7-100 (108)
418 1x5f_A Neogenin; RGM binding, 99.5 4.3E-14 1.5E-18 112.4 10.5 113 376-494 4-117 (120)
419 2xot_A Amphoterin-induced prot 99.5 1.5E-14 5.1E-19 139.6 9.1 98 2-113 258-359 (361)
420 3g9v_A Interleukin 22 receptor 99.5 1E-14 3.5E-19 127.4 7.1 185 289-483 9-205 (211)
421 1wfn_A Sidekick 2; FN3, cell a 99.5 3.5E-14 1.2E-18 112.6 9.3 106 373-484 1-106 (119)
422 2e7h_A Ephrin type-B receptor 99.5 1.6E-13 5.6E-18 106.5 13.0 101 385-492 3-104 (109)
423 2ed7_A Netrin receptor DCC; tu 99.5 1.1E-13 3.8E-18 109.8 12.2 106 383-494 11-116 (119)
424 1x4x_A Fibronectin type-III do 99.5 8E-14 2.7E-18 107.6 11.0 94 493-594 7-100 (106)
425 2crm_A Fibronectin type-III do 99.5 7.5E-14 2.6E-18 110.8 11.1 115 373-494 1-117 (120)
426 2wv3_A Neuroplastin; igcam, me 99.5 3.3E-13 1.1E-17 117.5 16.3 174 80-271 3-180 (190)
427 2djs_A Ephrin type-B receptor 99.5 1.8E-13 6E-18 106.3 12.8 102 385-493 3-104 (108)
428 1x5j_A Neogenin; RGM binding, 99.5 1.2E-13 4.2E-18 107.3 11.8 98 490-593 5-106 (113)
429 3v6o_A Leptin receptor; recept 99.5 1.9E-12 6.4E-17 113.5 20.8 184 290-482 3-197 (206)
430 2e3v_A Neural cell adhesion mo 99.5 8.3E-14 2.8E-18 110.5 11.1 101 488-593 3-105 (122)
431 4hwu_A Fibroblast growth facto 99.5 5.2E-14 1.8E-18 106.5 9.4 77 2-81 13-89 (95)
432 1uey_A KIAA0343 protein; immun 99.5 7E-14 2.4E-18 112.3 10.6 109 387-502 14-125 (127)
433 1x5i_A Neogenin; RGM binding, 99.5 1E-13 3.5E-18 110.6 11.4 110 370-489 2-117 (126)
434 3irg_A Titin; IG-like, titin, 99.5 2.9E-14 9.8E-19 109.4 7.9 77 2-78 17-98 (100)
435 3bn3_B ICAM-5, intercellular a 99.5 1.6E-13 5.5E-18 116.3 13.1 157 2-166 14-174 (196)
436 2ed8_A Netrin receptor DCC; tu 99.5 1.1E-13 3.7E-18 107.1 11.1 96 489-593 4-99 (106)
437 2j8h_A Titin, connectin; cardi 99.5 3E-13 1E-17 118.7 15.4 170 80-271 4-187 (197)
438 2kkq_A Myotilin; unknown funct 99.5 1.3E-13 4.3E-18 108.4 11.6 95 80-183 15-114 (116)
439 2edb_A Netrin receptor DCC; tu 99.5 9.5E-14 3.2E-18 108.9 10.8 93 484-584 8-101 (116)
440 3caf_A Fibroblast growth facto 99.5 3E-14 1E-18 109.1 7.8 76 2-77 20-99 (100)
441 2dav_A SLOW MYBP-C, myosin-bin 99.5 5.3E-14 1.8E-18 109.6 9.1 78 2-79 19-111 (126)
442 4fa8_A Secreted protein BARF1; 99.5 6.5E-14 2.2E-18 122.3 10.4 162 89-271 1-192 (203)
443 2e3v_A Neural cell adhesion mo 99.5 1.7E-13 5.7E-18 108.7 11.7 109 385-499 3-114 (122)
444 1uey_A KIAA0343 protein; immun 99.5 2.2E-13 7.6E-18 109.3 12.6 112 478-595 3-115 (127)
445 2iep_A Muscle-specific kinase 99.5 5.3E-14 1.8E-18 122.9 9.7 165 83-271 9-179 (192)
446 2ed8_A Netrin receptor DCC; tu 99.5 1.6E-13 5.4E-18 106.2 11.1 100 386-494 4-103 (106)
447 2dm2_A Palladin; beta-sandwich 99.5 8E-14 2.7E-18 108.8 9.3 96 80-184 8-108 (110)
448 2eny_A Obscurin; beta-sandwich 99.5 2.2E-14 7.4E-19 110.1 5.7 77 2-82 20-100 (104)
449 3lcy_A Titin; A-BAND, IG tande 99.5 3.9E-13 1.3E-17 118.0 14.5 170 80-271 7-186 (197)
450 2dm4_A Sortilin-related recept 99.5 2.1E-13 7.3E-18 105.8 11.3 99 387-494 5-105 (108)
451 2edn_A Myosin-binding protein 99.5 2.1E-14 7.3E-19 110.6 5.3 78 2-79 24-116 (118)
452 2va4_A NCAM2, N-CAM 2, neural 99.5 1.3E-13 4.6E-18 120.4 11.2 170 89-271 12-183 (192)
453 2dm4_A Sortilin-related recept 99.5 2.4E-13 8.2E-18 105.5 11.4 94 490-592 5-100 (108)
454 2e6q_A Obscurin-like protein 1 99.5 1.1E-13 3.7E-18 106.0 9.2 77 2-83 20-109 (112)
455 2crz_A Fibronectin type-III do 99.5 1.6E-13 5.4E-18 106.9 10.2 98 489-593 5-103 (110)
456 3cx2_A Myosin-binding protein 99.5 6.9E-14 2.4E-18 108.5 8.1 77 2-78 16-107 (108)
457 3t04_D Monobody 7C12; engineer 99.5 4.6E-13 1.6E-17 102.2 12.5 89 494-587 8-98 (103)
458 2dm3_A KIAA0992 protein, palla 99.5 1.4E-14 4.8E-19 113.3 4.1 81 2-82 21-105 (110)
459 1x44_A Myosin-binding protein 99.5 6.9E-14 2.4E-18 107.6 8.0 76 2-82 19-99 (103)
460 3bp6_B Programmed cell death 1 99.5 7E-13 2.4E-17 116.8 15.6 166 85-271 6-183 (202)
461 2edj_A Roundabout homolog 2; K 99.5 2.5E-13 8.4E-18 103.9 11.0 91 82-180 9-100 (100)
462 1x4x_A Fibronectin type-III do 99.5 2.8E-13 9.6E-18 104.4 11.3 99 387-494 5-103 (106)
463 2yrz_A Integrin beta-4; GP150, 99.5 1.3E-13 4.5E-18 109.1 9.6 111 374-491 2-113 (118)
464 3kvq_A Vascular endothelial gr 99.5 8.6E-14 3E-18 108.3 8.4 102 74-183 4-105 (108)
465 2e7c_A Myosin-binding protein 99.5 2.5E-13 8.7E-18 107.4 11.2 95 79-181 20-118 (118)
466 2cr6_A KIAA1556 protein, obscu 99.5 4.7E-14 1.6E-18 110.9 6.7 82 2-87 25-110 (115)
467 1x5a_A Ephrin type-A receptor 99.5 4E-13 1.4E-17 103.4 11.6 96 487-594 4-101 (107)
468 1wwc_A Protein (NT-3 growth fa 99.5 7.7E-14 2.6E-18 110.4 7.8 79 5-83 20-105 (118)
469 2e6p_A Obscurin-like protein 1 99.5 9E-14 3.1E-18 107.3 7.9 76 2-82 22-100 (104)
470 2dju_A Receptor-type tyrosine- 99.5 7.9E-13 2.7E-17 102.4 13.3 102 387-497 5-106 (106)
471 2db8_A Tripartite motif protei 99.5 1E-13 3.4E-18 107.6 8.1 98 491-595 8-105 (110)
472 2edf_A Obscurin; beta-sandwich 99.5 5.5E-14 1.9E-18 108.2 6.6 76 2-82 20-98 (103)
473 2yuv_A Myosin-binding protein 99.5 1.2E-13 4E-18 105.6 8.3 75 2-81 20-97 (100)
474 2cpc_A KIAA0657 protein; immun 99.5 1.9E-13 6.5E-18 107.3 9.7 80 2-86 25-107 (113)
475 1hxm_A Gamma-delta T-cell rece 99.5 6.5E-13 2.2E-17 118.3 14.3 155 2-166 13-198 (229)
476 2dn7_A Receptor-type tyrosine- 99.5 2.4E-13 8.3E-18 105.4 10.1 97 487-592 2-98 (107)
477 2edh_A Obscurin; structural ge 99.5 1.8E-13 6.1E-18 107.4 9.1 77 2-84 31-110 (113)
478 1f97_A Junction adhesion molec 99.5 1.5E-12 5E-17 115.8 16.3 174 84-271 4-195 (212)
479 1wis_A KIAA1514 protein; FNIII 99.5 1.6E-13 5.5E-18 109.3 8.9 112 378-494 6-122 (124)
480 2dm7_A KIAA1556 protein; beta- 99.5 1.2E-13 4.2E-18 107.3 7.9 83 2-90 20-105 (108)
481 3sgj_C Human FCG3A receptor; r 99.5 1.6E-13 5.5E-18 120.6 9.4 149 87-269 13-161 (204)
482 2e7b_A Obscurin; IG-like domai 99.5 1.4E-13 4.7E-18 106.0 7.9 77 2-83 20-99 (103)
483 2ckn_A Basic fibroblast growth 99.5 2.5E-13 8.5E-18 102.6 9.0 86 81-176 9-94 (95)
484 3bfo_A Mucosa-associated lymph 99.5 2.6E-13 8.8E-18 101.6 8.9 70 2-77 15-85 (91)
485 1x5l_A Ephrin type-A receptor 99.5 3.3E-13 1.1E-17 105.5 9.9 103 383-492 4-106 (111)
486 3irg_B Obscurin-like protein 1 99.5 3.5E-13 1.2E-17 104.6 10.0 91 81-180 13-107 (107)
487 1wit_A Twitchin 18TH IGSF modu 99.4 1.5E-13 5.1E-18 103.4 7.5 90 80-177 2-93 (93)
488 1wfu_A Unnamed protein product 99.4 2.1E-13 7E-18 106.1 8.4 100 488-594 10-114 (120)
489 3rbs_A Myomesin-1; immunoglobu 99.4 2.5E-12 8.4E-17 113.0 16.4 162 88-271 9-197 (207)
490 2kdg_A Myotilin; immonoglobuli 99.4 7.8E-13 2.7E-17 101.2 11.5 93 80-180 5-100 (100)
491 2c5d_C AXL oncogene, tyrosine- 99.4 7.3E-13 2.5E-17 115.9 12.8 166 81-271 3-182 (195)
492 1g1c_A Immunoglobulin-like dom 99.4 5.7E-13 2E-17 101.7 10.6 91 80-178 5-98 (99)
493 1pd6_A Cardiac MYBP-C;, myosin 99.4 2.1E-13 7.3E-18 104.4 8.1 72 2-78 28-103 (104)
494 2crz_A Fibronectin type-III do 99.4 6.4E-13 2.2E-17 103.4 11.0 101 387-494 6-107 (110)
495 2yuw_A Myosin binding protein 99.4 9.6E-13 3.3E-17 102.5 12.0 95 493-592 7-103 (110)
496 1x4z_A Biregional cell adhesio 99.4 9.5E-13 3.2E-17 104.5 12.1 104 383-491 11-116 (121)
497 2dlt_A Myosin binding protein 99.4 7.3E-14 2.5E-18 108.1 5.4 74 2-78 20-96 (106)
498 2k1m_A Myosin-binding protein 99.4 2.5E-13 8.7E-18 102.5 8.2 72 2-78 20-94 (95)
499 2yr3_A Myosin light chain kina 99.4 2.5E-13 8.5E-18 103.7 8.2 90 79-177 10-99 (99)
500 3u1s_H FAB PGT145 heavy chain; 99.4 3.1E-13 1.1E-17 124.3 10.4 169 2-175 35-262 (267)
No 1
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-56 Score=474.71 Aligned_cols=551 Identities=18% Similarity=0.216 Sum_probs=350.9
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCC-CCCEEEEEEEEcCCCCceeeE-EEEEE--
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDESKG-RLIVL-- 78 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~-~l~v~-- 78 (626)
..+.+++|.|.+.|.|.|.|.|.|+|..+..-. .+.|.|..+.. +..+.|+|++.|..|...... .+.+.
T Consensus 89 ~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~ 162 (731)
T 2v5y_A 89 SPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWN------RAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPC 162 (731)
T ss_dssp SCSEEEEEEEEETTCCCCSEEEEECCCCCSSCE------EEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCC
T ss_pred CCcceEEEEEecCCCCccceeEEEeCCcCCcee------EEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccc
Confidence 456799999999999999999999998774322 23466766533 345899999988888754432 22221
Q ss_pred -eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEe--eCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 79 -HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT--HNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 79 -~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~--~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
.+|.+. .+.+..+.+|++++|.|.+.|.|.|.+. .|+ +||..+...........+ ..+.|.|.+++..|+|
T Consensus 163 ~~~p~~~--~~~~~~v~~G~~v~l~C~~~g~P~p~i~-~W~~~~~g~~l~~~~~~~~~~~~---~~~~l~I~~~~~~d~g 236 (731)
T 2v5y_A 163 TRTPHFL--RIQNVEVNAGQFATFQCSAIGRTVAGDR-LWLQGIDVRDAPLKEIKVTSSRR---FIASFNVVNTTKRDAG 236 (731)
T ss_dssp SSSCEEC--CCCCEEEETTSCEEEEEEEESCCCTTCE-EEEEESSSCCEEEEEEEECCSSE---EEEEEEECSCCTTTCE
T ss_pred ccccccc--cccceEEeCCCcEEEEEEeCCCCCCcee-EEEecCCCccccccceEEecccc---ceEEEEEcccccccCe
Confidence 245544 3568999999999999999999998763 377 788877543210000011 2368999999999999
Q ss_pred eEEEEEEeCCCc-eEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCC-CCCcccEEEEEEeecCCCCceEeeccee
Q psy12061 156 EYECVVKSTVGK-ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWNSTWFNVSEHVI 233 (626)
Q Consensus 156 ~Y~C~a~n~~g~-~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~-~~~~~~~y~v~~~~~~~~~w~~~~~~~~ 233 (626)
.|+|.|.|..|. .+..+.|.|..+|.+|..+.+...+..++.|.|.++.. ++.++..|.|+++.. ...|.....
T Consensus 237 ~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~-~~~~~~~~~--- 312 (731)
T 2v5y_A 237 KYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTA-SGSWNDRQP--- 312 (731)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEES-SSSCEEEEE---
T ss_pred EEEEEEECCCCCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccCCCCccEEEEEEEEEC-CCCceEEec---
Confidence 999999999998 78889999999999999999988899999999997653 347899999999875 456754322
Q ss_pred eeeeeccCCceeEEEEeeccCCceEEEEEEEe--cCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeC
Q psy12061 234 GKEVDRYTGRKEASIENVLVPWSTYEFKVIAG--NELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPL 311 (626)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~--n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~ 311 (626)
.....+.+.+ |.+++.|.|+|.|. |..|.+.++... .+.+....|+.+|.++.+...+.+++.|+|+++
T Consensus 313 -------~~~~~~~i~~-L~p~t~Y~~~V~A~~~N~~G~s~~S~~~-~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p 383 (731)
T 2v5y_A 313 -------VDSTSYKIGH-LDPDTEYEISVLLTRPGEGGTGSPGPAL-RTRTKCADPMRGPRKLEVVEVKSRQITIRWEPF 383 (731)
T ss_dssp -------CCSSEEEECS-CCTTCEEEEEEEEECSSTTCSCCBCCCE-EEECCCCCCSCCCEEEEEEEECSSCEEEEEECC
T ss_pred -------cCcceEEEeC-CCCCCEEEEEEEEEecCCCccccCCCcE-EeeecCCCCCCCCceeEEEeccCCeEEEEEECC
Confidence 1224566655 99999999999999 999999877764 567777788889999999988999999999985
Q ss_pred CCCCcccCcceEEEEEEecCCCcceeeee-eeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCC
Q psy12061 312 PREKQNAPNIYYKIFWRKKNDTEFQSETL-KEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMP 390 (626)
Q Consensus 312 ~~~~~~~~~~~y~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p 390 (626)
.....++.+.+|.|+|+......+..... ..........+.+.+|.|++.|.|+|+|.|..|.|. |..+.++|.+.+|
T Consensus 384 ~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P 462 (731)
T 2v5y_A 384 GYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLP 462 (731)
T ss_dssp CHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCC
T ss_pred CcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCC
Confidence 43334567889999999876433322111 111223445688999999999999999999999985 8889999999888
Q ss_pred CCCC-CceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCc------cceEEEEecCccceEEEeCCccCc
Q psy12061 391 QVAP-QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE------ETAVYYLSRTTRNWALIVGLQPDT 463 (626)
Q Consensus 391 ~~~p-~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~------~~~~~~~~~~~~~~~~i~~L~p~t 463 (626)
..+| ..+.... ..+++.|+|++|... +|.|.+|.|+|+...... .............++.+.+|+|++
T Consensus 463 ~~p~~~~~~~~~-~~~si~l~W~~P~~~----~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 537 (731)
T 2v5y_A 463 GAVPTESIQGST-FEEKIFLQWREPTQT----YGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGT 537 (731)
T ss_dssp CCCCTTTCEEEE-ETTEEEEECCCCSCC----SSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTE
T ss_pred CCCCcceEEeee-cCCeEEEEEcCCCCC----CCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCC
Confidence 8555 3565553 578999999998643 377999999998765431 112222334556679999999999
Q ss_pred eEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEE-EeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcc
Q psy12061 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH-IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR 542 (626)
Q Consensus 464 ~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~-~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~ 542 (626)
.|.|+|+|+|..|.|+++. ..++|...+|..|+.... ....+.+++.|+|. +|.+.+++|.+|.|.|+..+.....
T Consensus 538 ~Y~~~V~A~n~~G~g~~s~-~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~--pp~~~~g~I~~Y~v~~~~~~~~~~~ 614 (731)
T 2v5y_A 538 TYSFTIRASTAKGFGPPAT-NQFTTKISAPSMPAYELETPLNQTDNTVTVMLK--PAHSRGAPVSVYQIVVEEERPRRTK 614 (731)
T ss_dssp EEEEEEEEEETTEEEEEEE-EEEECCCCCCCC------------------------------------------------
T ss_pred EEEEEEEEEeCCccCCCcc-cEEEcCCCCCCCCCcccccccccCCceEEEEEe--CCCCCCCceEEEEEEEEecCCCCCc
Confidence 9999999999999999884 778898888775443332 23457889999999 6778899999999988765432100
Q ss_pred c----cc---------------------------------eeeec--CccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 543 A----ND---------------------------------TIIPV--GNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 543 ~----~~---------------------------------~~~~~--~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
. .. .+... .....|.+..|+|++.|.|+|+|++.+|.|..+
T Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~ 694 (731)
T 2v5y_A 615 KTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKI 694 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEe
Confidence 0 00 00000 011233456699999999999999999999988
Q ss_pred CCcE
Q psy12061 584 SPAI 587 (626)
Q Consensus 584 ~~~~ 587 (626)
+.+.
T Consensus 695 ~~v~ 698 (731)
T 2v5y_A 695 DCVQ 698 (731)
T ss_dssp ----
T ss_pred eeEE
Confidence 6544
No 2
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=430.26 Aligned_cols=542 Identities=15% Similarity=0.201 Sum_probs=371.8
Q ss_pred CCCCceEEEEeeeC-------CCCCCeeEEEeCCEEccCCCcEEEccC--CcEEEccCCCCCCEEEEEEEEcC--CCCce
Q psy12061 2 AGEGGNVTIFCNPE-------AAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNV--HGMDE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-------g~p~p~i~W~~~~~~i~~~~~~~~~~~--g~L~i~~v~~~d~G~Y~C~a~n~--~g~~~ 70 (626)
+.+|++++|.|.+. +.|.+.|.|++||..|... ++.+..+ .+|.|.++...|++ |.|.+... .....
T Consensus 15 v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~~~~i~~~-~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~~~~~~~ 92 (589)
T 3l5h_A 15 VQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASLNIQ-LTCNILTFGQLEQNV 92 (589)
T ss_dssp CCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCSSSBSCGG-GCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCTTCC-CCC
T ss_pred EeCCCCEEEEEEEeCccCccccccccceEEEeCCEECChH-HccccCCcEeEEEEecCCCccee-eEEecccCCCcccEE
Confidence 57899999999997 6778899999999878643 2233322 36999999998866 77887642 12233
Q ss_pred eeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccC--CcceeE--EEeeCCEEeccccCCccCCCeeE---ecCCe
Q psy12061 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE--LLDVAY--IWTHNGVRIGNMDLNELETPNIN---IDGGL 143 (626)
Q Consensus 71 ~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p--~p~~~i--~W~~~~~~~~~~~~~~~~~~~~~---~~~~~ 143 (626)
..+.|.|..+|. +|.++.+..-..-.+.|.+.... .+...+ .+...+... .... .....
T Consensus 93 ~~~~l~v~~pP~----~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~----------~~c~~~~~~~~~ 158 (589)
T 3l5h_A 93 YGITIISGLPPE----KPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKF----------ADCKAKRDTPTS 158 (589)
T ss_dssp CCCCCCC-CCCC----CCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBC----------CCEECBTTBSSC
T ss_pred EeEEEeccCCCC----CCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCc----------ccCCCCCCCcEE
Confidence 455666655552 34445444332233444443321 111111 111111000 0010 01234
Q ss_pred EEEe-ecCCCCCEeEEEEEEeCCCceE-EEEEEEEe--CCCCCCCceEEE--EEeccceEEEEecCCCCCCcccEEEEEE
Q psy12061 144 LEIT-NASFADAGEYECVVKSTVGKIS-TKTTVIVE--GPPGLPGGVQVV--EVHKTSATIQWTDGATNGRPITHYKIIA 217 (626)
Q Consensus 144 l~i~-~~~~~d~g~Y~C~a~n~~g~~~-~~~~l~v~--~~P~~p~~~~~~--~~~~~~~~l~W~~~~~~~~~~~~y~v~~ 217 (626)
..|. ++.....+.|+|.|.|..|... ....+... .+|.+|.++.+. ....+++.|+|++|...+..+..|.|++
T Consensus 159 c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~ 238 (589)
T 3l5h_A 159 CTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQY 238 (589)
T ss_dssp CBCCSCCCSSSCEEECEEEEESSCCBCCCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEE
T ss_pred EEECCCCchheeEEEEEEEEeCCCCcccccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEE
Confidence 4444 5666778899999999999752 23333322 378999999884 4678999999998876666789999999
Q ss_pred eecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCC--cccCCCCCCCCCCceeE
Q psy12061 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKPYQAPSRIG 295 (626)
Q Consensus 218 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~--~~~~~~~~p~~~p~~~~ 295 (626)
+..+...|..+..... ......+.+.+ |.|++.|.|+|+|.|..|.+.++..+. .+.+....|..+|..+.
T Consensus 239 ~~~~~~~w~~~~~~~~------~~~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~ 311 (589)
T 3l5h_A 239 RTKDASTWSQIPPEDT------ASTRSSFTVQD-LKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWY 311 (589)
T ss_dssp EETTCSCCBCCCTTSS------CSCCSEEEECS-CCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEE
T ss_pred CCCCCCCcEEEccccC------cCceeEEEECC-CCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEE
Confidence 9988888876532110 01223555655 999999999999999999877654433 34677777767887655
Q ss_pred ee----cCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecC
Q psy12061 296 GG----GGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND 371 (626)
Q Consensus 296 ~~----~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~ 371 (626)
.. ..+.+++.|.|+++++...++.+.+|+|+|+..+. .+..... ....+++ |.+++.|.|+|.|.|.
T Consensus 312 ~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~-~~~~~~~------~~~~~~~--l~~~~~Y~~~V~A~n~ 382 (589)
T 3l5h_A 312 KIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKS-HLQNYTV------NATKLTV--NLTNDRYLATLTVRNL 382 (589)
T ss_dssp ECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTS-CCCBCCC------SSSCCEE--CCCSSCCCEEEEEEBT
T ss_pred EeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCC-Cceeecc------CCceEEE--EeCCCCEEEEEEEEeC
Confidence 33 45678999999987777888999999999976553 2322111 1122223 7799999999999999
Q ss_pred CCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccc--eEEEEecC
Q psy12061 372 VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET--AVYYLSRT 449 (626)
Q Consensus 372 ~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~ 449 (626)
.|.|.++..... +....++.+|.++.+... .+++.|+|++|.. .+.+|.|+|+........ ........
T Consensus 383 ~G~~~~s~~~~~-~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~-------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 453 (589)
T 3l5h_A 383 VGKSDAAVLTIP-ACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE-------SVKKYILEWCVLSDKAPCITDWQQEDGT 453 (589)
T ss_dssp TBCCCCCCCCCC-CTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS-------CCSCBCCEEEEECSSSCCCEEECCBCSS
T ss_pred CccCCCeEEEee-cccccCCCCcceEEEEEC-CCeEEEEEECCCC-------CccEEEEEEEECCCCCCCccCcEEeeCC
Confidence 999988764322 222223446668887755 6899999999863 378999999877654321 11112233
Q ss_pred ccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeE
Q psy12061 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGY 529 (626)
Q Consensus 450 ~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y 529 (626)
....+.+.+|.|++.|.|+|+|+|..|.|..+ ...+.|.+..|..+| ++.+...+.+++.|+|+++++.+.+|.|.+|
T Consensus 454 ~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~-~~~~~t~~~~P~~pp-~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y 531 (589)
T 3l5h_A 454 VHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNY 531 (589)
T ss_dssp CCEEECCSCCCSSSEEEEEECBEETTEECCCE-EEEEESSCCCCSSCC-CCCEECCCSSCBEEBCCCCCHHHHCSCEEEE
T ss_pred cceEEehhccccCcEEEEEEEEEeCCcccCCE-EEEEEeccCCCCCCC-eEEEeecccceEEEEecCCCHHHcCccceeE
Confidence 34456679999999999999999999988775 466778888887655 7888888999999999965567788999999
Q ss_pred EEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
.|+|+..++.. .........+.+.+.+|.|++.|.|+|+|.|.+| |++|.+ +.|+|.
T Consensus 532 ~v~~~~~~~~~----~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~-~~~~T~ 588 (589)
T 3l5h_A 532 TIFYRTIIGNE----TAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPE-FTFTTP 588 (589)
T ss_dssp EECCBCSSCCC----CCEEECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEECCC-CEECCC
T ss_pred EEEEEeCCCCe----EEEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCCCC-eEEecC
Confidence 99887655432 2445667889999999999999999999999999 888854 556654
No 3
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=6.1e-46 Score=367.35 Aligned_cols=358 Identities=23% Similarity=0.363 Sum_probs=287.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEccC-----CCcEEEcc---CCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIGS-----GGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i~~-----~~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+.+|++++|.|.+.|.|.|.|.|+|+ |..|.. +.|+.+.. +++|.|.+++.+|+|.|+|.|.|..|....
T Consensus 12 ~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (389)
T 2jll_A 12 TYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQK 91 (389)
T ss_dssp EETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred EeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcce
Confidence 46899999999999999999999999 998864 46777754 347999999999999999999999999988
Q ss_pred eEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEEe
Q psy12061 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEIT 147 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~ 147 (626)
.+.|.|..+|.+.. ++....+..|++++|.|.+.+.|.| .+.|+|+|..+..... .++.. ....|.|.
T Consensus 92 ~~~l~V~~~P~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~g~~l~~~~~-----~~~~~~~~~~~~~L~i~ 163 (389)
T 2jll_A 92 SMYLDIEYAPKFIS-NQTIYYSWEGNPINISCDVKSNPPA--SIHWRRDKLVLPAKNT-----TNLKTYSTGRKMILEIA 163 (389)
T ss_dssp EEEEEEEEEEEECC-SCCEEEECTTCCEEEEECEEEESCC--EEEEEETTEESSCTTC-----TTEEEEECSSCEEEEEC
T ss_pred EEEEEEEeCCEEec-CcceEEeccCCEEEEEEEEEecCCC--eEEEEECCccCCcccC-----ceEEEeccCCEEEEEEC
Confidence 99999998887765 4555688999999999999999875 5699999999875421 12222 24579999
Q ss_pred ecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCC-CCCCcccEEEEEEeecCCCCce
Q psy12061 148 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWF 226 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~-~~~~~~~~y~v~~~~~~~~~w~ 226 (626)
++...|+|.|+|.|.|..|..+..+.+.+..+|.+|.++.+......++.|.|.++. .++.++..|.|+++..+...|.
T Consensus 164 ~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~ 243 (389)
T 2jll_A 164 PTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK 243 (389)
T ss_dssp CCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE
T ss_pred CCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE
Confidence 999999999999999999999999999999999999999998889999999999765 4456889999999998888887
Q ss_pred EeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEE
Q psy12061 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSI 306 (626)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l 306 (626)
..... .....+.+.+ |.+++.|.|+|.|.|..|.+.++... .+.+.+..++.+|. +.....+.+++.|
T Consensus 244 ~~~~~---------~~~~~~~i~~-l~~~~~y~~~v~A~N~~G~~~~s~~~-~~~t~~~~~p~~p~-~~~~~~~~~~v~l 311 (389)
T 2jll_A 244 IVRSH---------GVQTMVVLNN-LEPNTTYEIRVAAVNGKGQGDYSKIE-IFQTLPVREPSPPS-IHGQPSSGKSFKL 311 (389)
T ss_dssp EEECS---------TTCSEEEECS-CCTTCEEEEEEEEEESSCBCCCCCCE-EEECCCCCCCCCCC-EEEEEETTTEEEE
T ss_pred Eeecc---------CCcceEEECC-ccCCCEEEEEEEEEcCCccCCCCcce-EEEecCCCCCCCCc-cccccCcCCEEEE
Confidence 54321 1223566655 99999999999999999998877764 45555555556674 5555568899999
Q ss_pred EEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEc
Q psy12061 307 SWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFS 385 (626)
Q Consensus 307 ~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t 385 (626)
+|.+ +.+.++++.+|.|+|+..+...|...... . .....+.+.+|.|++.|.|+|+|.|..|.|.+|.. .+.|
T Consensus 312 ~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~--~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T 384 (389)
T 2jll_A 312 SITK--QDDGGAPILEYIVKYRSKDKEDQWLEKKV-Q--GNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSM 384 (389)
T ss_dssp EECC--CCCCSSCCCEEEEEEEC-----CCBCCEE-C--TTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEEC
T ss_pred EEEC--CCCCCCcccEEEEEEEeCCCCcceeEeec-c--CCcceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecC
Confidence 9998 56778899999999998766666532211 1 12346789999999999999999999999998865 5555
No 4
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=375.25 Aligned_cols=458 Identities=14% Similarity=0.182 Sum_probs=323.3
Q ss_pred CCCceEEecCCcEEEEEEecc-------cCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEE
Q psy12061 87 LPPKITIAAHRNLQLRCSAHT-------EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159 (626)
Q Consensus 87 ~~~~~~v~~g~~~~l~C~~~~-------~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 159 (626)
.|++..+..|++++|.|.+.. .+.+ .|.|++||..+..... ..+....+.|.|.++...|++ |+|
T Consensus 9 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~~--~i~W~~~~~~i~~~~~-----~~~~~~~~~l~i~~~~~~~~~-y~C 80 (589)
T 3l5h_A 9 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNAN--YIVWKTNHFTIPKEQY-----TIINRTASSVTFTDIASLNIQ-LTC 80 (589)
T ss_dssp SCSCCCCCSSSCCCCCC-CCTTTTTTTTCCTT--TCCCBCSSSBSCGGGC-----BCCSSSCCBCCCCCCCSSCCC-CCC
T ss_pred ecCCCEEeCCCCEEEEEEEeCccCcccccccc--ceEEEeCCEECChHHc-----cccCCcEeEEEEecCCCccee-eEE
Confidence 467788999999999999984 3444 4589999987765421 112223568999999988765 779
Q ss_pred EEEeC--CCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeee
Q psy12061 160 VVKST--VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEV 237 (626)
Q Consensus 160 ~a~n~--~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~ 237 (626)
.+... .+.....+.|.+..+|.+|.++.|......++.++|+++.+. .....|.|+++.... .|..+...
T Consensus 81 ~~~~~~~~~~~~~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~~~-~~~~~y~l~~~~~~~-~~~~c~~~------ 152 (589)
T 3l5h_A 81 NILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRET-HLETNFTLKSEWATH-KFADCKAK------ 152 (589)
T ss_dssp C-CCTTCC-CCCCCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCSCC-SSCEEEEECCBCSSS-BCCCEECB------
T ss_pred ecccCCCcccEEEeEEEeccCCCCCCEeeEEEECCCceEEEEECCCCcC-CcCceEEEEEEEcCC-CcccCCCC------
Confidence 88642 223356678888899999999999999999999999987644 457899998765432 22221110
Q ss_pred eccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEe--ecCCcCeEEEEEeeCCCCC
Q psy12061 238 DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG--GGGKIGDLSISWEPLPREK 315 (626)
Q Consensus 238 ~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~--~~~~~~~v~l~W~~~~~~~ 315 (626)
......+.+..+|.+++.|.|+|.|.|..|.+.+... .+.+....++.+|.++.+ ...+.+++.|+|++ +..
T Consensus 153 --~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~~--~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~--p~~ 226 (589)
T 3l5h_A 153 --RDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHI--NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN--PSI 226 (589)
T ss_dssp --TTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCCE--EECGGGSEECCCCCSCEEECTTTCTTCEEEECCC--CGG
T ss_pred --CCCcEEEEECCCCchheeEEEEEEEEeCCCCcccccE--EEccccEEEcCCCceEEEEecCCCCCeEEEEeCC--CCC
Confidence 0122344454359999999999999999997643221 233333334578888888 45678999999998 444
Q ss_pred cccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCC---CccEEEEccCCCCCC
Q psy12061 316 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE---SEVVTIFSAEDMPQV 392 (626)
Q Consensus 316 ~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~---s~~~~~~t~~~~p~~ 392 (626)
.++.+..|.|+|+..+...|....... .......+.+.+|.|++.|.|+|+|.|..|.|.+ |....+.|.+..|..
T Consensus 227 ~~~~~~~Y~v~~~~~~~~~w~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~ 305 (589)
T 3l5h_A 227 KSVIILKYNIQYRTKDASTWSQIPPED-TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSK 305 (589)
T ss_dssp GGTSCEEEEEEEEETTCSCCBCCCTTS-SCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCS
T ss_pred CCeeeEEEEEEECCCCCCCcEEEcccc-CcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCC
Confidence 567889999999998877787543211 1123456789999999999999999999987665 566677888888877
Q ss_pred CCCceEEE----eeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEE
Q psy12061 393 APQGVFSR----GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468 (626)
Q Consensus 393 ~p~~~~~~----~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~ 468 (626)
+|..+... ..+.+++.|.|+++..... +|.|.+|.|.|+..+..... .......+ ..|.+++.|.|+
T Consensus 306 ~p~~~~~v~~~~~~~~~~v~l~W~p~~~~~~--~g~i~~Y~v~~~~~~~~~~~-----~~~~~~~~--~~l~~~~~Y~~~ 376 (589)
T 3l5h_A 306 APSFWYKIDPSHTQGYRTVQLVWKTLPPFEA--NGKILDYEVTLTRWKSHLQN-----YTVNATKL--TVNLTNDRYLAT 376 (589)
T ss_dssp CCCEEEECCSCSSTTSCCEEEEECCCCTTTS--SSCCCEEEEEECCTTSCCCB-----CCCSSSCC--EECCCSSCCCEE
T ss_pred CCcEEEEeecCcCCCcceEEEEEeeCCchhc--cCceeeEEEEEecCCCCcee-----eccCCceE--EEEeCCCCEEEE
Confidence 88766543 3567899999998654333 48899999998655443221 12222333 448999999999
Q ss_pred EEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcc-cccee
Q psy12061 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSR-ANDTI 547 (626)
Q Consensus 469 V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~-~~~~~ 547 (626)
|+|.|..|.|+.+... +.+....++.||.++.+... .+++.|+|+ +|. ..+.+|.|+|+..+..... .....
T Consensus 377 V~A~n~~G~~~~s~~~-~~~~~~~~~~p~~~l~~~~~-~~si~l~W~--~p~---~~i~~Y~v~~~~~~~~~~~~~~~~~ 449 (589)
T 3l5h_A 377 LTVRNLVGKSDAAVLT-IPACDFQATHPVMDLKAFPK-DNMLWVEWT--TPR---ESVKKYILEWCVLSDKAPCITDWQQ 449 (589)
T ss_dssp EEEEBTTBCCCCCCCC-CCCTTCCCCSCCCSCEEEEC-SSSEEEECC--CCS---SCCSCBCCEEEEECSSSCCCEEECC
T ss_pred EEEEeCCccCCCeEEE-eecccccCCCCcceEEEEEC-CCeEEEEEE--CCC---CCccEEEEEEEECCCCCCCccCcEE
Confidence 9999999999888543 33333334556778877755 689999999 443 2788999998876654221 11222
Q ss_pred eecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 548 ~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
........+.+.+|.|++.|.|+|+|+|..|.|.++
T Consensus 450 ~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~ 485 (589)
T 3l5h_A 450 EDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE 485 (589)
T ss_dssp BCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE
T ss_pred eeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE
Confidence 333445567779999999999999999999999875
No 5
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=345.08 Aligned_cols=415 Identities=18% Similarity=0.284 Sum_probs=293.7
Q ss_pred CCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCC-CceEEEEEeccceEEEEecCCC-CCCcccEEEEEEeecCC-----
Q psy12061 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP-GGVQVVEVHKTSATIQWTDGAT-NGRPITHYKIIARTNWN----- 222 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p-~~~~~~~~~~~~~~l~W~~~~~-~~~~~~~y~v~~~~~~~----- 222 (626)
...+.|.+.| +.|..|..=......+...|.+| .++.+...+.+++.|+|+++.+ ++.++. |.|+++....
T Consensus 131 d~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~ 208 (680)
T 1zlg_A 131 DNECSGVKKC-CSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSE 208 (680)
T ss_pred cccCCCcccc-ccccccccccccceeeecccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCc
Confidence 3457888888 56667764222333357889999 8999999999999999998854 356666 9999987632
Q ss_pred ---CCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCC-CCCCCCceeEeec
Q psy12061 223 ---STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPAD-KPYQAPSRIGGGG 298 (626)
Q Consensus 223 ---~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~-~p~~~p~~~~~~~ 298 (626)
..|..+.. .....+.+.+ |.|++.|.|+|.|.|..|.+.++.....+++... .++.+|.++.+..
T Consensus 209 ~~~~~w~~v~~----------~~~~~~~i~~-L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~ 277 (680)
T 1zlg_A 209 DDATHWQTVAQ----------TTDERVQLTD-IRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLAN 277 (680)
T ss_pred cccCceEEEEe----------cCCCeEEeCC-CCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeee
Confidence 46766533 1223456655 9999999999999999995545554445566444 5678899999887
Q ss_pred C--CcC---eEEEEEeeCCCCCcccCcceEEEEEEec-C------CCcceeeeeeeecceeeEEEEeCCCcceeEEEEEE
Q psy12061 299 G--KIG---DLSISWEPLPREKQNAPNIYYKIFWRKK-N------DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 299 ~--~~~---~v~l~W~~~~~~~~~~~~~~y~i~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
. +.+ ++.|+|++ +...++++.+|+|+|+.. + ...|..... ......+++.+|.|++.|.|+|
T Consensus 278 ~~~~~~g~~sv~l~W~p--P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v----~~~~~~~~l~~L~p~t~Y~~~V 351 (680)
T 1zlg_A 278 STVNSDGSVTVTIVWDL--PEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTT----DGFQNSVILEKLQPDCDYVVEL 351 (680)
T ss_pred eeecCCCceEEEEEecC--CCCCCCceeEEEEEEEecccccccCCccceEEEEE----cCCeeEEEeCCCCCCCEEEEEE
Confidence 7 677 99999998 445678999999999832 1 123443322 1234678899999999999999
Q ss_pred EEecCCCCCCCCcc---EEEEccCCCCCCCCCceEEEeeecceEEE-----------EeeeccccccccceeeEEEEEEE
Q psy12061 367 QAINDVGPGPESEV---VTIFSAEDMPQVAPQGVFSRGFNSTAINV-----------TWNPIELIRENIRGRLIGHRIKY 432 (626)
Q Consensus 367 ~a~n~~g~~~~s~~---~~~~t~~~~p~~~p~~~~~~~~~~~si~l-----------~W~~~~~~~~~~~~~i~~Y~v~~ 432 (626)
+|.|..|.|.+|.. +.+.|....|. |.++.+...+.+++.| +|.+|... +.+.+|.|.|
T Consensus 352 ~A~n~~G~g~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~-----~~~~~y~v~w 424 (680)
T 1zlg_A 352 QAITYWGQTRLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQ-----DGQLQVKVYW 424 (680)
T ss_pred EEEECCCcCCCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCccc-----CCcceEEEEE
Confidence 99999999988877 77888777775 7788888888888877 99988532 2356888888
Q ss_pred EecCCCccce------------------EEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecC----
Q psy12061 433 WKEDNPEETA------------------VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR---- 490 (626)
Q Consensus 433 ~~~~~~~~~~------------------~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~---- 490 (626)
+..+...... ..........++.|.+|+|++.|.|+|+|.|..|.|+.. ...|.|..
T Consensus 425 ~~~~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~-~~~f~T~~~~~~ 503 (680)
T 1zlg_A 425 KKTEDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAE-AVFFTTPPCSAL 503 (680)
T ss_pred eCCCCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCcc-ccceeCCCcccc
Confidence 6655321000 001123345679999999999999999999999966421 12222211
Q ss_pred -------------CCC-----CCCCce----EEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCc--cccce
Q psy12061 491 -------------KAP-----QKPPSA----VHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS--RANDT 546 (626)
Q Consensus 491 -------------~~p-----~~~p~~----l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~--~~~~~ 546 (626)
..| +.+|.+ +.+...+.+ +.|+|++| ..+.+|.|++|.|+|+....... .....
T Consensus 504 ~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP-~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~ 581 (680)
T 1zlg_A 504 KGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSWKMA-KANLYQPMTGFQVTWAEVTTESRQNSLPNS 581 (680)
T ss_pred ccCCccccccCCCCccccccccCCccccceeEEEeccCce-EEEEecCC-CCCCCCCceeEEEEEEEccCCCccccccce
Confidence 112 156777 566666666 99999952 23458999999999876533211 11111
Q ss_pred -----eeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecccc
Q psy12061 547 -----IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595 (626)
Q Consensus 547 -----~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~~ 595 (626)
....++.+++.|.+|.|++.|.|+|+|+|.+|.|+. .+ ..+++....
T Consensus 582 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~-~~~~T~~~~ 633 (680)
T 1zlg_A 582 IISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TI-KTFRTPELP 633 (680)
T ss_pred eeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cc-eEEECCCCC
Confidence 122356789999999999999999999999999997 33 557666543
No 6
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=346.44 Aligned_cols=493 Identities=15% Similarity=0.147 Sum_probs=328.9
Q ss_pred CEEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCce---EEecC------CcEEEEEEecccCCcceeEEEeeCCEEec
Q psy12061 55 SGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKI---TIAAH------RNLQLRCSAHTEELLDVAYIWTHNGVRIG 125 (626)
Q Consensus 55 ~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~---~v~~g------~~~~l~C~~~~~p~p~~~i~W~~~~~~~~ 125 (626)
+|.|.++-... +.....|.|.--. +.......+ .-+.| .+++|.|.+.|.|.|.+ .|.|+|..+.
T Consensus 45 ~g~y~~~~~s~-~~~~~~a~l~sp~---~~~~~~~c~~F~y~m~G~~~~~~g~l~v~c~~~g~P~p~i--~W~k~g~~~~ 118 (731)
T 2v5y_A 45 SGSFMLVNASG-RPEGQRAHLLLPQ---LKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNP--IWNISGDPTR 118 (731)
T ss_dssp SSEEEEEECTT-CCTTCEEEEEEEE---ECCSSCCEEEEEEEEECSSSSCSEEEEEEEEETTCCCCSE--EEEECCCCCS
T ss_pred cccEEEEECcC-CCCCCEEEEEeCc---cCCCCCcEEEEEEEecCCCCCCcceEEEEEecCCCCccce--eEEEeCCcCC
Confidence 58898877664 4334556655321 111011111 22333 48999999999998855 8999998864
Q ss_pred cccCCccCCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCceEEE-EEEEEeCCCCCCC---ceEEEEEeccceEEEE
Q psy12061 126 NMDLNELETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKISTK-TTVIVEGPPGLPG---GVQVVEVHKTSATIQW 200 (626)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~~~~~-~~l~v~~~P~~p~---~~~~~~~~~~~~~l~W 200 (626)
.- ....+.|..+...+ .+.|+|.+.|..|..... +.+.....+.+|. ...+.......+.|.|
T Consensus 119 ~~------------~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~~~~~~v~~G~~v~l~C 186 (731)
T 2v5y_A 119 TW------------NRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQC 186 (731)
T ss_dssp SC------------EEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECCCCCEEEETTSCEEEEE
T ss_pred ce------------eEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccccccceEEeCCCcEEEEE
Confidence 31 12245565542333 478899888887764322 1222221122221 1123344567789999
Q ss_pred ecCCCCCCcccEEEEEEeecCC-CCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCc
Q psy12061 201 TDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ 279 (626)
Q Consensus 201 ~~~~~~~~~~~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~ 279 (626)
...... .+...+.... .++. ..+... ...........+.|.+ |.+.+.|.|+|.|.|..|.+........
T Consensus 187 ~~~g~P-~p~i~~W~~~-~~g~~l~~~~~------~~~~~~~~~~~l~I~~-~~~~d~g~Y~c~A~n~~G~~~s~~~~l~ 257 (731)
T 2v5y_A 187 SAIGRT-VAGDRLWLQG-IDVRDAPLKEI------KVTSSRRFIASFNVVN-TTKRDAGKYRCMIRTEGGVGISNYAELV 257 (731)
T ss_dssp EEESCC-CTTCEEEEEE-SSSCCEEEEEE------EECCSSEEEEEEEECS-CCTTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred EeCCCC-CCceeEEEec-CCCccccccce------EEeccccceEEEEEcc-cccccCeEEEEEEECCCCCcceeeEEEE
Confidence 864322 2222221111 1111 111100 0000000123556655 9999999999999999997433332223
Q ss_pred ccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcce
Q psy12061 280 YNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY 359 (626)
Q Consensus 280 ~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 359 (626)
+...+.+ +.+|.. ...+.+++.|.|.++ ...+++++..|.|+|+..+ ..|...... ....+.+.+|.|+
T Consensus 258 V~~~P~~-~~~p~~---~~~~~~~v~l~w~~~-~~~g~~~i~~Y~v~~~~~~-~~~~~~~~~-----~~~~~~i~~L~p~ 326 (731)
T 2v5y_A 258 VKEPPVP-IAPPQL---ASVGATYLWIQLNAN-SINGDGPIVAREVEYCTAS-GSWNDRQPV-----DSTSYKIGHLDPD 326 (731)
T ss_dssp EECCCCB-SSCCEE---EEECSSCEEEECCCS-SBSSCSCCCEEEEEEEESS-SSCEEEEEC-----CSSEEEECSCCTT
T ss_pred EecCCCC-CCCcce---eccCCceEEEEeCCc-ccCCCCccEEEEEEEEECC-CCceEEecc-----CcceEEEeCCCCC
Confidence 3333322 234433 334678999999973 3345588999999999864 556543221 2356789999999
Q ss_pred eEEEEEEEEe--cCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCC
Q psy12061 360 TEYEVKVQAI--NDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN 437 (626)
Q Consensus 360 ~~Y~~~v~a~--n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~ 437 (626)
+.|.|+|.|. |..|.+.+|....+++.+..|+.+|.++++...+.+++.|+|+++..... ++.+.+|.|+|+....
T Consensus 327 t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~--~~~~~~y~v~y~~~~~ 404 (731)
T 2v5y_A 327 TEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVT--RCHSYNLTVHYCYQVG 404 (731)
T ss_dssp CEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHH--CSSSCEEEEEEEEESS
T ss_pred CEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccc--cceeeeEEEEEEEccC
Confidence 9999999999 99999999999999999988988999999999999999999999864332 2567899999987764
Q ss_pred CccceE---EEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCC-ceEEEeeeCCCEEEEE
Q psy12061 438 PEETAV---YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP-SAVHIKGINPTTVHVT 513 (626)
Q Consensus 438 ~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p-~~l~~~~~~~~~~~l~ 513 (626)
...... ..........+++.+|+|++.|.|+|+|.|..|.|+ |..+.++|.+.+|..+| ..+.... ..+++.|+
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~ 482 (731)
T 2v5y_A 405 GQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQ 482 (731)
T ss_dssp SSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEE
T ss_pred CCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeee-cCCeEEEE
Confidence 332211 113334556799999999999999999999999985 88899999999887665 3565543 46899999
Q ss_pred EeecCCCCCCCceeeEEEEEEEeccCCc-----cccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEE
Q psy12061 514 WRYVSPSFEEEPIIGYKVRVWEVDQDMS-----RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAIT 588 (626)
Q Consensus 514 W~~~~~~~~~~~i~~Y~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~ 588 (626)
|+ +|...+|.|.+|.|+|+..+.... ..........+.+++.+.+|.|++.|.|+|+|+|..|.|++| . +.
T Consensus 483 W~--~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s-~-~~ 558 (731)
T 2v5y_A 483 WR--EPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-T-NQ 558 (731)
T ss_dssp CC--CCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE-E-EE
T ss_pred Ec--CCCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc-c-cE
Confidence 99 567788999999999987664311 112234456778899999999999999999999999999988 3 44
Q ss_pred Eeecc
Q psy12061 589 FQMGE 593 (626)
Q Consensus 589 ~~~~~ 593 (626)
+++..
T Consensus 559 ~~T~~ 563 (731)
T 2v5y_A 559 FTTKI 563 (731)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 55554
No 7
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=100.00 E-value=1.4e-37 Score=304.50 Aligned_cols=363 Identities=19% Similarity=0.272 Sum_probs=268.5
Q ss_pred CCCCCCceEEEEEecc-ceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCce
Q psy12061 179 PPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWST 257 (626)
Q Consensus 179 ~P~~p~~~~~~~~~~~-~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 257 (626)
||.+|.++++...... ++.|+|+++. +..+.+|.|+++..+...|....... ......+.+.+ |.+++.
T Consensus 1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~-L~p~t~ 70 (368)
T 1fnf_A 1 PLSPPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVV-------HADQSSCTFDN-LSPGLE 70 (368)
T ss_dssp CCCCCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEE-------CTTCCEEECCC-CCTTSC
T ss_pred CCCCCcceEEEecCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEe-------cCCcCEEEECC-CCCCCE
Confidence 6889999999887776 5999999875 35689999999986554332111111 02233455555 999999
Q ss_pred EEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCC-Ccce
Q psy12061 258 YEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-TEFQ 336 (626)
Q Consensus 258 y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~-~~~~ 336 (626)
|.|+|+|.|..|.+.+... .+...+ .+|.++.+...+.+++.|+|++++ ++.+.+|.|+|+..+. ..|.
T Consensus 71 Y~~~V~a~~~~g~s~~~~~----~~~~~~--~~p~~l~~~~~~~~si~l~W~~p~----~~~~~~Y~v~~~~~~~~~~~~ 140 (368)
T 1fnf_A 71 YNVSVYTVKDDKESVPISD----TIIPAV--PPPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEEDVA 140 (368)
T ss_dssp EEEEEEEEETTEECCCEEE----EECCCC--CCCEEEEEESCCSSCEEEEEECCT----TCCCSEEEEEEEETTCTTCCE
T ss_pred EEEEEEEEcCCCccCceee----eecCCC--cCCceeEEEEcCCCeEEEEeeCCC----CCCCcEEEEEEEECCCCCccE
Confidence 9999999999997764322 222222 378899999889999999999842 3678999999998663 3454
Q ss_pred eeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccc
Q psy12061 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416 (626)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~ 416 (626)
..... .....+.+.+|.|++.|.|+|+|.|..|.+.+.... ..+ .| .+|.++.+...+.+++.|+|+++.
T Consensus 141 ~~~~~----~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~-~~~---~~-~~P~~l~~~~~~~~sv~l~W~~p~- 210 (368)
T 1fnf_A 141 ELSIS----PSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGR-QKT---GL-DSPTGIDFSDITANSFTVHWIAPR- 210 (368)
T ss_dssp EEEEC----TTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEE-EEC---CC-CCCEEEEEESCCSSEEEEEEECCS-
T ss_pred EEEcC----CCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEee-ecC---CC-CCCCccEEEEccCCEEEEEEeCCC-
Confidence 43322 134567899999999999999999999876543221 222 23 378899999889999999999874
Q ss_pred cccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCC
Q psy12061 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKP 496 (626)
Q Consensus 417 ~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~ 496 (626)
+.+.+|.|+|+..+...... ..........+.+.+|.|++.|.|+|+|.|..|.|+.+.. ... .++.+
T Consensus 211 ------~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~-~~~----t~p~~ 278 (368)
T 1fnf_A 211 ------ATITGYRIRHHPEHFSGRPR-EDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG-QQS----TVSDV 278 (368)
T ss_dssp ------SCCSEEEEEEECSCCSSCCE-EEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE-EEE----CCCCS
T ss_pred ------CCcCEEEEEEecCCCCCCcc-EEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccc-ccc----CCCCC
Confidence 45889999998766533222 2233455567999999999999999999999998876532 222 23457
Q ss_pred CceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEec
Q psy12061 497 PSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576 (626)
Q Consensus 497 p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~ 576 (626)
|.++.+...+.+++.|+|+ ++. +.+.+|.|+|+..++... ........+.+.+.+.+|.|++.|.|+|+|+|.
T Consensus 279 P~~l~~~~~~~~sv~l~W~--~p~---~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~ 351 (368)
T 1fnf_A 279 PRDLEVVAATPTSLLISWD--APA---VTVRYYRITYGETGGNSP--VQEFTVPGSKSTATISGLKPGVDYTITVYAVTG 351 (368)
T ss_dssp CEEEEEEEEETTEEEEEEE--CCS---SCCSEEEEEEEETTCCSC--CEEEEEETTCCEEEECSCCTTCCEEEEEEEECC
T ss_pred CCeeEEEecCCCEEEEEee--CCC---CccceEEEEEEECCCCCc--cEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCC
Confidence 8899998889999999999 443 248899999876654321 223445667889999999999999999999999
Q ss_pred CCCCCCCCCcEEEe
Q psy12061 577 GGDGRMSSPAITFQ 590 (626)
Q Consensus 577 ~G~g~~s~~~~~~~ 590 (626)
.|.|++|+..+.++
T Consensus 352 ~G~g~~s~~~~~i~ 365 (368)
T 1fnf_A 352 RGDSPASSKPISIN 365 (368)
T ss_dssp CSSSCCBCCCEEEE
T ss_pred CCcCcccCceeeee
Confidence 99999987555443
No 8
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=100.00 E-value=7.2e-37 Score=300.21 Aligned_cols=357 Identities=18% Similarity=0.257 Sum_probs=268.6
Q ss_pred CCCCCCceEEEEEecc-ceEEEEecCCCCCCcccEEEEEEeecCCCC--ceEeecceeeeeeeccCCceeEEEEeeccCC
Q psy12061 179 PPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVLVPW 255 (626)
Q Consensus 179 ~P~~p~~~~~~~~~~~-~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~--w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 255 (626)
|+.+|.++++...+.. ++.|+|+++.. ..+.+|.|+++...... +.... . ......+.+.+ |.++
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~--~-------~~~~~~~~i~~-L~p~ 69 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEV--V-------HADQSSCTFDN-LSPG 69 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEE--E-------ETTCCEEEECC-CCTT
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEE--c-------CCCccEEEEcC-CcCC
Confidence 6889999999998888 99999998754 35889999998865422 21110 0 02334566655 9999
Q ss_pred ceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcc
Q psy12061 256 STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEF 335 (626)
Q Consensus 256 ~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~ 335 (626)
+.|.|+|+|.|..|.+.+.. ..+....| +|.++.+...+.+++.|+|+++. ++.+.+|.|+|+..+....
T Consensus 70 t~Y~~~V~a~~~~g~s~~~~----~~~~~~~p--~p~~l~~~~~~~~si~l~W~~~~----~~~i~~Y~v~~~~~~~~~~ 139 (375)
T 3t1w_A 70 LEYNVSVYTVKDDKESVPIS----DTIIPEVP--QLTDLSFVDITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGIP 139 (375)
T ss_dssp CCEEEEEEEEETTEECCCEE----EEECCCCC--CCSCCEEECCCSSEEEEECCCCC----CTTEEEEEEEEEESSSCCS
T ss_pred CEEEEEEEEEcCCCCCCcEE----eeEcCCCC--CCceEEEEecCCCeEEEEEECCC----CCCceEEEEEEEECCCCCc
Confidence 99999999999988765433 22333344 47889998889999999999832 4678999999998764322
Q ss_pred eeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecc
Q psy12061 336 QSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE 415 (626)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~ 415 (626)
...... ......+.+.+|.|++.|.|+|+|.|..|.|.++.. ...+ .|+ +|.++.+...+.+++.|+|+++.
T Consensus 140 ~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~-~~~t---~~~-~p~~l~~~~~~~~si~l~W~~p~ 211 (375)
T 3t1w_A 140 IFEDFV---DSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTL-TQQT---AVP-PPTDLRFTNIGPDTMRVTWAPPP 211 (375)
T ss_dssp CEEEEE---CTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEE-EEEC---CCC-CCEEEEEESCCSSCEEEEEECCS
T ss_pred eeEEEc---CCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeee-eeec---CCC-CCceeEEEecccCEEEEEEcCCC
Confidence 211111 123456789999999999999999999998887663 3444 333 78899999889999999999874
Q ss_pred ccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCC
Q psy12061 416 LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495 (626)
Q Consensus 416 ~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~ 495 (626)
. +.+.+|.|+|+..+...... ..........+.+.+|.|++.|.|+|+|.|..|.|..+. ..+.| ++.
T Consensus 212 ~------~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~-~~~~t----~p~ 279 (375)
T 3t1w_A 212 S------IDLTNFLVRYSPVKNEEDVA-ELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKT----GLD 279 (375)
T ss_dssp S------CCCCEEEEEEEEGGGTTCCE-EEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC----CCC
T ss_pred C------CCccEEEEEEEeCCCCCCcE-EEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee-eEEec----CCC
Confidence 2 55889999998776443222 223344557799999999999999999999999887653 33444 234
Q ss_pred CCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEe
Q psy12061 496 PPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFS 575 (626)
Q Consensus 496 ~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~ 575 (626)
+|.++.+...+.+++.|+|+ +| .+.+.+|.|+|+..+... ...........+.+.+.+|.|++.|.|+|+|+|
T Consensus 280 ~P~~l~~~~~~~~sv~l~W~--~p---~~~~~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 352 (375)
T 3t1w_A 280 SPTGIDFSDITANSFTVHWI--AP---RATITGYRIRHHPEHFSG--RPREDRVPHSRNSITLTNLTPGTEYVVSIVALN 352 (375)
T ss_dssp CCEEEEEESCCSSCEEEEEE--CC---SSCCSEEEEEEEETTCCS--SCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCccEeeeccCCEEEEEEC--CC---CcceeeEEEEEEECCCCC--cceeEEcCCCccEEEECCCCCCCEEEEEEEEEC
Confidence 78899998889999999999 44 378899999988765421 133455567788999999999999999999999
Q ss_pred cCCCCCCCC
Q psy12061 576 NGGDGRMSS 584 (626)
Q Consensus 576 ~~G~g~~s~ 584 (626)
..|.|++..
T Consensus 353 ~~G~s~p~s 361 (375)
T 3t1w_A 353 GREESPLLI 361 (375)
T ss_dssp TTEECCCEE
T ss_pred CCCCCCcee
Confidence 999998663
No 9
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.9e-35 Score=292.14 Aligned_cols=367 Identities=15% Similarity=0.141 Sum_probs=255.8
Q ss_pred CCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEEeccccCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEE
Q psy12061 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGNMDLNELETPNINI----DGGLLEITNASFADAGEYECVV 161 (626)
Q Consensus 88 ~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a 161 (626)
+.+..+.+|++++|.|.+.+.|.|. |.|+|+ |..+....... ..++.. ..+.|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~--v~W~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPE--ITWKRAVDGFTFTEGDKSL--DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEA 82 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCE--EEEEETTTTEEECC--CCS--SSSEEEEECSSEEEEEEESCCGGGCEEEEEEE
T ss_pred cCceEEeCCCeEEEEEEeecccCCe--EEEEeCCCCceeccCcCCC--CCeEEEeccCCcceEEEcccChhhCEEEEEEE
Confidence 5677888899999999999998774 589999 88886532111 234443 3468999999999999999999
Q ss_pred EeCCCceEEEEEEEEeCCCCCCCceEE-EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee-----
Q psy12061 162 KSTVGKISTKTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK----- 235 (626)
Q Consensus 162 ~n~~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~----- 235 (626)
.|..|..+..+.|.|..+|........ .......+.|.|.... .+. ..+.|. +.+..+...
T Consensus 83 ~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g---~p~--~~i~W~--------~~g~~l~~~~~~~~ 149 (389)
T 2jll_A 83 ASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKS---NPP--ASIHWR--------RDKLVLPAKNTTNL 149 (389)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEE---ESC--CEEEEE--------ETTEESSCTTCTTE
T ss_pred EeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEe---cCC--CeEEEE--------ECCccCCcccCceE
Confidence 999999999999999887753322222 2233445566664311 111 122222 211111000
Q ss_pred eeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCC
Q psy12061 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315 (626)
Q Consensus 236 ~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~ 315 (626)
..........+.+.+ +.+.+.|.|+|.|.|..|....... . .. ..++.+|.++.+......++.|.|.+ +...
T Consensus 150 ~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~~~~~---l-~v-~~~P~~P~~~~~~~~~~~~~~l~w~~-p~~~ 222 (389)
T 2jll_A 150 KTYSTGRKMILEIAP-TSDNDFGRYNCTATNHIGTRFQEYI---L-AL-ADVPSSPYGVKIIELSQTTAKVSFNK-PDSH 222 (389)
T ss_dssp EEEECSSCEEEEECC-CSTTSSEEEEEEEEETTEEEEEEEE---E-EE-CCCCCCCEEEEEEEECSSCEEEEEEC-CSCC
T ss_pred EEeccCCEEEEEECC-CChhhCEEEEEEEEcCCCcEEEEEE---E-Ee-cCCCCCCcceEEeeccCCEEEEEEeC-CCCC
Confidence 000001223456655 9999999999999999997532211 1 11 22335777788777778899999997 2344
Q ss_pred cccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCC
Q psy12061 316 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQ 395 (626)
Q Consensus 316 ~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~ 395 (626)
.+.++..|.|+|+..+...|...... .....+.+.+|.+++.|.|+|.|.|..|.+.+|....+.+.+..|+.+|
T Consensus 223 ~g~pi~~y~v~~~~~~~~~~~~~~~~----~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p- 297 (389)
T 2jll_A 223 GGVPIHHYQVDVKEVASEIWKIVRSH----GVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPP- 297 (389)
T ss_dssp TTSCEEEEEEEEEETTCSCCEEEECS----TTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCC-
T ss_pred CCcceEEEEEEEEECCCcccEEeecc----CCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCC-
Confidence 55678899999999887777643321 2335678999999999999999999999999999988888777666567
Q ss_pred ceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCC
Q psy12061 396 GVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA 475 (626)
Q Consensus 396 ~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~ 475 (626)
.+.....+.+++.|+|+++.+. ++.+.+|.|+|+..+...+.... ........+.+.+|+|++.|.|+|+|.|..
T Consensus 298 ~~~~~~~~~~~v~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~ 372 (389)
T 2jll_A 298 SIHGQPSSGKSFKLSITKQDDG----GAPILEYIVKYRSKDKEDQWLEK-KVQGNKDHIILEHLQWTMGYEVQITAANRL 372 (389)
T ss_dssp CEEEEEETTTEEEEEECCCCCC----SSCCCEEEEEEEC-----CCBCC-EECTTCCEEEECSCCTTCEEEEEEEEEC-C
T ss_pred ccccccCcCCEEEEEEECCCCC----CCcccEEEEEEEeCCCCcceeEe-eccCCcceEEeCCcCCCCEEEEEEEEEcCC
Confidence 5667778899999999987643 36799999999875554433221 223455679999999999999999999999
Q ss_pred CCCCCCccEEEeec
Q psy12061 476 GEGPESERYLERTY 489 (626)
Q Consensus 476 g~s~~s~~~~~~t~ 489 (626)
|.|++|.. .++|.
T Consensus 373 G~s~~s~~-~~~T~ 385 (389)
T 2jll_A 373 GYSEPTVY-EFSMP 385 (389)
T ss_dssp CBCCCEEE-EEECC
T ss_pred cCCCceee-EecCC
Confidence 99998864 66665
No 10
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=280.09 Aligned_cols=268 Identities=25% Similarity=0.355 Sum_probs=220.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC-CcEEEc--cCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIF--ENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~-~~~~~~--~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+ .++.+. .++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 16 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 95 (305)
T 2nzi_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLE 95 (305)
T ss_dssp ECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEE
Confidence 578999999999999999999999999998754 455543 344 799999999999999999999999888888999
Q ss_pred EEeCCceee----eCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cCCeEEEee-c
Q psy12061 77 VLHGPSYYE----QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLEITN-A 149 (626)
Q Consensus 77 v~~~p~~~~----~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~-~ 149 (626)
|..+|.+.. ..+....+..|++++|.|.+.+.|.| .+.|++++..+..... ..+.. ....|.|.+ +
T Consensus 96 V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~-----~~~~~~~~~~~l~i~~~~ 168 (305)
T 2nzi_A 96 VEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGH-----YQVIVTRSFTSLVFPNGV 168 (305)
T ss_dssp ECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCC--EEEEEESSSBCCSSSS-----CEEEECSSEEEEEETTCC
T ss_pred EecCCccCCCccccccccEEecCCCEEEEEEEECCCCCC--EEEEEECCEECCCCCc-----EEEEEcCCceEEEEecCC
Confidence 977665432 12356788999999999999999887 5689999988865421 11211 346899999 9
Q ss_pred CCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCC-CCCCcccEEEEEEeecCCCCceEe
Q psy12061 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNV 228 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~-~~~~~~~~y~v~~~~~~~~~w~~~ 228 (626)
...|+|.|+|.|.|..|..+..+.|.|..+|.+|.++.+......++.|+|.+|. +++.++..|.++++......|...
T Consensus 169 ~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~ 248 (305)
T 2nzi_A 169 ERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRV 248 (305)
T ss_dssp CSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEE
T ss_pred ccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEEC
Confidence 9999999999999999999999999999999999999998889999999999864 455689999999999888899876
Q ss_pred ecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCC
Q psy12061 229 SEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKP 287 (626)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p 287 (626)
.... ...+.+.+ |.+++.|.|+|.|.|..|.+.++..+..+.+.+..|
T Consensus 249 ~~~~----------~~~~~i~~-l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t~~~~p 296 (305)
T 2nzi_A 249 GQAR----------ETRYTVIN-LFGKTSYQFRVIAENKFGLSKPSEPSEPTITKEDKT 296 (305)
T ss_dssp EEES----------SSEEEECS-CCSSCEEEEEEEEEETTEECCCCCCCCCEECCC---
T ss_pred cccc----------CceEEecC-CCCCCeEEEEEEEEeCCcccCCcCCCCCEEcCCccc
Confidence 5431 33566655 999999999999999999999998877676655544
No 11
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=100.00 E-value=5.2e-36 Score=296.07 Aligned_cols=376 Identities=13% Similarity=0.105 Sum_probs=187.5
Q ss_pred CCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEE
Q psy12061 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYE 259 (626)
Q Consensus 180 P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~ 259 (626)
..+|.++++... ..++.|+|+++.++..++. |.|+++..+...|.......... .....+... +|.++..|.
T Consensus 8 l~~P~nv~~~~~-~~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~-----~~~~~~t~~-~l~~~~~Y~ 79 (414)
T 3se4_A 8 LKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNIT-----STKCNFSSL-KLNVYEEIK 79 (414)
T ss_dssp ---CCCCCEEEE-TTEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEES-----CSCEECCSS-CCCTTSCEE
T ss_pred CCCCceeEEEEE-CCceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCC-----CCEEECCcc-cccCCCcEE
Confidence 456889999776 4678999999877666776 99999987778897653221110 111122222 389999999
Q ss_pred EEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCc-----ccCcceEEEEEEecCCCc
Q psy12061 260 FKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ-----NAPNIYYKIFWRKKNDTE 334 (626)
Q Consensus 260 ~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~-----~~~~~~y~i~~~~~~~~~ 334 (626)
|||+|.| .+.+.++... .+......+..+|. +.+.... +++.|+|+ +....+ ++.+.+|+|.|+..+...
T Consensus 80 ~rV~A~n-~~~S~~s~~~-~~~~~~~~~~~pP~-v~~~~~~-~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~ 154 (414)
T 3se4_A 80 LRIRAEK-ENTSSWYEVD-SFTPFRKAQIGPPE-VHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGV 154 (414)
T ss_dssp EEEEEEE-TTEEEEEECC-CBCHHHHCCCCCCE-EEEEECS-SCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCC
T ss_pred EEEEEee-CCcCCCEecC-ceeecccceeCCCe-EEEEEcC-CEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCc
Confidence 9999999 6555443221 22221122334554 6665544 68999999 432321 356889999999887544
Q ss_pred ceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecC--CCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEee
Q psy12061 335 FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND--VGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412 (626)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~--~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~ 412 (626)
.... . .....+.+.+|.|++.|.|+|+|.|. .|.|.+|....+.|.++.|..+|.++.+...+ .++.|+|+
T Consensus 155 ~~~~--~----~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~ 227 (414)
T 3se4_A 155 EERI--E----NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWD 227 (414)
T ss_dssp EEEE--E----EECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEE
T ss_pred eEEE--e----cCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEEC
Confidence 2221 1 12345789999999999999999994 68888898888888887777789999988665 67999999
Q ss_pred eccccccccceeeEEEEEEEEec--------CCCccceEEEEecCccceEEEe-CCccCceEEEEEEEeeCCCCCCCCcc
Q psy12061 413 PIELIRENIRGRLIGHRIKYWKE--------DNPEETAVYYLSRTTRNWALIV-GLQPDTKYYVKVMAYNNAGEGPESER 483 (626)
Q Consensus 413 ~~~~~~~~~~~~i~~Y~v~~~~~--------~~~~~~~~~~~~~~~~~~~~i~-~L~p~t~Y~v~V~a~~~~g~s~~s~~ 483 (626)
++.. ..+|.|+|+.. +...+.............+.+. +|.+++.|.|+|+|.|..|.|++|..
T Consensus 228 pp~~--------~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~ 299 (414)
T 3se4_A 228 YTYA--------NMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE 299 (414)
T ss_dssp CSSS--------SCEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCC
T ss_pred CCCC--------CeEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCccccccc
Confidence 9641 23999999863 1111111000011223456676 69999999999999999999999998
Q ss_pred EEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCC------CceeeEEEEEEEeccCCccccceeeecCccceEE
Q psy12061 484 YLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE------EPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDAD 557 (626)
Q Consensus 484 ~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~------~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (626)
..|.|.++.+++||. +.+... .+++.|.|++ |...+ +.+.+|.|.|+..+.... .. ...+.+.+.
T Consensus 300 ~~~~t~~~~~~~pP~-l~~~~~-~~si~v~W~~--P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~---~~--~~~~~~~~~ 370 (414)
T 3se4_A 300 IKFDTEIQAFLLPPV-FNIRSL-SDSFHIYIGA--PKQSGNTPVIQDYPLIYEIIFWENTSNAE---RK--IIEKKTDVT 370 (414)
T ss_dssp EEEETTCC------------------------------------------------------------------------
T ss_pred ccccchhccccCCCe-EEEEEC-CCeEEEEEEC--CCCccccchhhcCCeEEEEEEEECCCCce---EE--EEecCCeEE
Confidence 999999998888887 887754 5799999995 44333 467899999887654321 11 124667899
Q ss_pred ecCCCCCceEEEEEEEEec----CCCCCCCCCcEEEeecc
Q psy12061 558 IVDLSPGKRYHMRVLAFSN----GGDGRMSSPAITFQMGE 593 (626)
Q Consensus 558 l~~L~p~~~Y~~~V~a~~~----~G~g~~s~~~~~~~~~~ 593 (626)
|.+|+|++.|.|+|+|++. .|.|++|.+ +++++.+
T Consensus 371 l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~-~~~~T~~ 409 (414)
T 3se4_A 371 VPNLKPLTVYCVKARAHTMDEKLNKSSVFSDA-VCEKTKP 409 (414)
T ss_dssp ----------------------------------------
T ss_pred eCCCCCCCeEEEEEEEEecccccCCCCCCCCC-EeEEeCC
Confidence 9999999999999999993 589999965 5566643
No 12
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=286.36 Aligned_cols=454 Identities=15% Similarity=0.175 Sum_probs=289.0
Q ss_pred CCCCCEEEEEEEEcCCCCceeeEEEEEEeCCceeeeCC-CceEEe--cCCcEEEEEEeccc--CCcc-eeEEEeeC-CEE
Q psy12061 51 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLP-PKITIA--AHRNLQLRCSAHTE--ELLD-VAYIWTHN-GVR 123 (626)
Q Consensus 51 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~-~~~~v~--~g~~~~l~C~~~~~--p~p~-~~i~W~~~-~~~ 123 (626)
..++.|.+.| +.|..|..=......+...| .+| .++.+. ..+.++|.+....+ ..+. ..|.|... +..
T Consensus 131 d~~c~g~~~C-c~n~cG~~C~~P~~~~~~~P----~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~ 205 (680)
T 1zlg_A 131 DNECSGVKKC-CSNGCGHTCQVPKTLYKGVP----LKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIH 205 (680)
T ss_pred cccCCCcccc-ccccccccccccceeeeccc----ccccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCC
Confidence 3567888988 55666653222222232222 234 444443 45668888775321 1121 22334332 210
Q ss_pred eccccCCccCCCeeE-ecCCeEEEeecCCCCCEeEEEEEEeCCCc---eEEEEEEEEe---CCCCCCCceEEEEE--ecc
Q psy12061 124 IGNMDLNELETPNIN-IDGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIVE---GPPGLPGGVQVVEV--HKT 194 (626)
Q Consensus 124 ~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~---~~~~~~l~v~---~~P~~p~~~~~~~~--~~~ 194 (626)
......... ..+. .....+.|.++.....+.|++.|.|..|. .+....+... .+|.+|.++++... +.+
T Consensus 206 ~~~~~~~~w--~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~ 283 (680)
T 1zlg_A 206 PSEDDATHW--QTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSD 283 (680)
T ss_pred cCccccCce--EEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCC
Confidence 000000000 1111 23457889999999999999999998882 2223333332 57889999999877 777
Q ss_pred ---ceEEEEecCCCCCCcccEEEEEEeec-C------CCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEE
Q psy12061 195 ---SATIQWTDGATNGRPITHYKIIARTN-W------NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIA 264 (626)
Q Consensus 195 ---~~~l~W~~~~~~~~~~~~y~v~~~~~-~------~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a 264 (626)
++.|+|++|...+.++.+|.|+++.. . ...|...... .....+.+.+ |.+++.|.|+|.|
T Consensus 284 g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~~l~~-L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 284 GSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTD---------GFQNSVILEK-LQPDCDYVVELQA 353 (680)
T ss_pred CceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEc---------CCeeEEEeCC-CCCCCEEEEEEEE
Confidence 99999998876678899999999832 1 1234432211 1223555555 9999999999999
Q ss_pred ecCCccCCCCCCC--CcccCCCCCCCCCCceeEeecCCcCeEEE-----------EEeeCCCCCcccCcceEEEEEEecC
Q psy12061 265 GNELGYGEPSSPS--PQYNTPADKPYQAPSRIGGGGGKIGDLSI-----------SWEPLPREKQNAPNIYYKIFWRKKN 331 (626)
Q Consensus 265 ~n~~g~~~~s~~~--~~~~~~~~~p~~~p~~~~~~~~~~~~v~l-----------~W~~~~~~~~~~~~~~y~i~~~~~~ 331 (626)
.|..|.+..+... ..+.+....|. |.++.+...+.+++.| .|.++. . ...+.+|+|.|+..+
T Consensus 354 ~n~~G~g~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~--~-~~~~~~y~v~w~~~~ 428 (680)
T 1zlg_A 354 ITYWGQTRLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPF--Y-QDGQLQVKVYWKKTE 428 (680)
T ss_pred EECCCcCCCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCc--c-cCCcceEEEEEeCCC
Confidence 9999998776652 24556666553 7788887777788876 999842 2 234668899888665
Q ss_pred CCc-------ceeee---------eeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEcc---------
Q psy12061 332 DTE-------FQSET---------LKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSA--------- 386 (626)
Q Consensus 332 ~~~-------~~~~~---------~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~--------- 386 (626)
... |.... ...........+.+.+|.|++.|.|+|+|.|..|.+... ...+.+.
T Consensus 429 ~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~~-~~~f~T~~~~~~~~~~ 507 (680)
T 1zlg_A 429 DPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAE-AVFFTTPPCSALKGKS 507 (680)
T ss_pred CCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCcc-ccceeCCCccccccCC
Confidence 321 10000 000011234567899999999999999999999965421 1111111
Q ss_pred --------CCCCC-----CCCCc----eEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc---c-eEEE
Q psy12061 387 --------EDMPQ-----VAPQG----VFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE---T-AVYY 445 (626)
Q Consensus 387 --------~~~p~-----~~p~~----~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~---~-~~~~ 445 (626)
...|. .+|.+ +.+...+.+ +.|+|++|.... +|.|.+|.|+|+....... . ....
T Consensus 508 ~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW~pP~~~~---ng~I~gY~V~y~~~~~~~~~~~~~~~~~ 583 (680)
T 1zlg_A 508 HKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSWKMAKANL---YQPMTGFQVTWAEVTTESRQNSLPNSII 583 (680)
T ss_pred ccccccCCCCccccccccCCccccceeEEEeccCce-EEEEecCCCCCC---CCCceeEEEEEEEccCCCccccccceee
Confidence 11121 46777 566656555 999999986432 4789999999987643321 0 0000
Q ss_pred ----EecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCC
Q psy12061 446 ----LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF 521 (626)
Q Consensus 446 ----~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~ 521 (626)
.......++.|.+|+|++.|.|+|+|.|..|.|+. ....++|...+|. +|..+.+.... .|+|++ +...
T Consensus 584 ~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~-~P~~l~v~~~~----~l~W~p-P~~~ 656 (680)
T 1zlg_A 584 SQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPS-SAHRSHLKHRH----PHHYKP-SPER 656 (680)
T ss_pred ecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCC-CCCCCeEEecc----ceeECC-CCCC
Confidence 11234567999999999999999999999999988 7788899887665 67778776543 899995 3344
Q ss_pred CCCceeeEEEEEEEecc
Q psy12061 522 EEEPIIGYKVRVWEVDQ 538 (626)
Q Consensus 522 ~~~~i~~Y~i~~~~~~~ 538 (626)
.+.+|.+|.+.|.....
T Consensus 657 ~G~~I~~~~~~~~~~~~ 673 (680)
T 1zlg_A 657 YGKPIPNPLLGLDSTRT 673 (680)
T ss_pred CCCccceeeEEEeeccc
Confidence 56788899998865443
No 13
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.3e-31 Score=275.34 Aligned_cols=524 Identities=15% Similarity=0.174 Sum_probs=287.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC---CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|||..|....++.+... ++|.|.+++.+|+|.|+|.|.|..|...+.+.|.|.
T Consensus 17 v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~ 96 (570)
T 3b43_A 17 AAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIK 96 (570)
T ss_dssp ECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEEC
Confidence 56899999999999999999999999999987777776543 369999999999999999999999998888888775
Q ss_pred e--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 79 H--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 79 ~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
. .|+.+...+.+..+..|++++|.|.+.+.|.| ++.|+|||..+...... ..........|.|.++..+|+|.
T Consensus 97 ~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~ 171 (570)
T 3b43_A 97 ERKLPPSFARKLKDVHETLGFPVAFECRINGSEPL--QVSWYKDGELLKDDANL---QTSFIHNVATLQILQTDQSHVGQ 171 (570)
T ss_dssp CCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSC--EEEEEETTEECCCCSSE---EEEEETTEEEEEESSCCGGGCEE
T ss_pred CCCCCCcccccCCCeEecCCCeEEEEEEEccCCCC--EEEEEECCEECcCCCCE---EEEEECCEEEEEECcCChHHCEE
Confidence 4 23333345677888999999999999998876 56999999998754200 00111234689999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCCCCCCceEE-----EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecc
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQV-----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~-----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~ 231 (626)
|+|.|.|..|..+..+.|.+.....+|. +.. .......+.|.|.... .+.. .+. |.+.+..
T Consensus 172 Y~C~a~n~~g~~~~~~~l~v~~~~~pp~-~~~~p~~~~v~~G~~~~l~C~~~g---~p~p--~i~--------W~k~g~~ 237 (570)
T 3b43_A 172 YNCSASNPLGTASSSAKLTLSEHEVPPF-FDLKPVSVDLALGESGTFKCHVTG---TAPI--KIT--------WAKDNRE 237 (570)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCCCCE-EEECCCCBCCBSBSCEEEEEEEES---SSCC--EEE--------EEETTEE
T ss_pred EEEEEEeCCcEEEEEEEEEEcCCCCCCc-cccCCceeEecCCCeEEEEEEEEE---CCCC--EEE--------EEECCEE
Confidence 9999999999998888888876443331 111 1122344555555321 1111 122 2222111
Q ss_pred eeeee---eeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEE
Q psy12061 232 VIGKE---VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISW 308 (626)
Q Consensus 232 ~~~~~---~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W 308 (626)
+.... .........+.+.+ +...+.+.|+|.|.|..|....+... .+..++......+....+. ....+.|..
T Consensus 238 i~~~~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~a~N~~g~~~~~~~l-~V~~~p~~~~~~~~~~~v~--~g~~~~l~C 313 (570)
T 3b43_A 238 IRPGGNYKMTLVENTATLTVLK-VTKGDAGQYTCYASNVAGKDSCSAQL-GVQEPPRFIKKLEPSRIVK--QDEHTRYEC 313 (570)
T ss_dssp CCTTSSEEEEEETTEEEEEESS-BCGGGCEEEEEEEEETTEEEEEEEEE-CCBCCCEEEECCCSBCCEE--SSCEEEEEE
T ss_pred CcCCCcEEEEEECCEEEEEEcc-cCcccCEEEEEEEECCCCcEEEEEEE-EeecCCcccccCCCccEEc--CCCcEEEEE
Confidence 11000 00001223455655 89999999999999998864322211 1111100000000011111 224455655
Q ss_pred eeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCC
Q psy12061 309 EPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAED 388 (626)
Q Consensus 309 ~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~ 388 (626)
... + .+. -.+.|.+.+..--...............+.+.++.......|+|.|.|..|....+..+.+...+.
T Consensus 314 ~~~----g-~P~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~ 386 (570)
T 3b43_A 314 KIG----G-SPE--IKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPV 386 (570)
T ss_dssp EEE----S-SSS--CEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCE
T ss_pred EEe----e-CCC--CEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCe
Confidence 541 1 111 156676655110000000000011234566778887778889999999998754444443332221
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC--ccceEEEEecCccceEEEeCCccCceEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP--EETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
... .|..+.+ .....+.|.......+. -.+.|.+.+.. ...............+.|.++.....-.
T Consensus 387 ~~~-~~~~~~~--~~G~~v~l~C~~~g~P~---------p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 454 (570)
T 3b43_A 387 FRK-KPHPVET--LKGADVHLECELQGTPP---------FQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGE 454 (570)
T ss_dssp ECS-CCCCEEE--CTTCCEEEEEEEESSSS---------CCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEE
T ss_pred eec-CCCceee--cCCCEEEEEEEEecCCC---------CEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEE
Confidence 111 2333322 22334444443221110 11233222211 0011111112222346788888777777
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEE----EeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCc-
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH----IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMS- 541 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~----~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~- 541 (626)
++..|.|..|....+..+.+.. +|..+. ........+.|.-.- .... .+ .|.|+..+....
T Consensus 455 Y~C~A~N~~G~~~~~~~l~v~~-------~P~~~~~~~~~~~~~g~~~~l~c~~--~g~p--~~---~v~W~k~~~~~~~ 520 (570)
T 3b43_A 455 YQCKASNDVGSDTCVGSITLKA-------PPRFVKKLSDISTVVGEEVQLQATI--EGAE--PI---SVAWFKDKGEIVR 520 (570)
T ss_dssp EEEEEECSSCEEEEEEEEEECC-------CCEEEECCCCBCCBTTCCEEEEEEE--ESCS--SC---CCEEEETTEECCC
T ss_pred EEEEEEECCCeEEEEEEEEecc-------CCcccccCCCceecCCCeEEEEEEE--ecCC--CC---EEEEEeCCeEecc
Confidence 7888999988643222222211 221111 011122334443331 0000 00 122222221110
Q ss_pred -cccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCC
Q psy12061 542 -RANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581 (626)
Q Consensus 542 -~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~ 581 (626)
.....+..........|.++.+...=.+...|.|..|...
T Consensus 521 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 561 (570)
T 3b43_A 521 ESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQE 561 (570)
T ss_dssp CTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEE
T ss_pred CCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEE
Confidence 0011112223445677888888777777888999988654
No 14
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=100.00 E-value=8.4e-33 Score=260.76 Aligned_cols=268 Identities=15% Similarity=0.203 Sum_probs=204.3
Q ss_pred CCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCC
Q psy12061 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES 378 (626)
Q Consensus 299 ~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s 378 (626)
.+.+++.|.|+++++...++.+.+|.|+|+..+.... .... . ...+.+|.|++.|.|+|.|.|..|.|.++
T Consensus 20 ~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~~~~------~--~~~~~~l~p~t~Y~~~V~A~n~~G~s~~s 90 (290)
T 3l5i_A 20 QGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-NYTV------N--ATKLTVNLTNDRYLATLTVRNLVGKSDAA 90 (290)
T ss_dssp TTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-EEEE------S--SSEEEEEECSSCEEEEEEEEESSCBCCCE
T ss_pred CCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-eEec------C--CcEEEEEcCCceEEEEEEEEcCCCCCCCc
Confidence 3468999999986666788999999999998764322 1111 1 12356788999999999999999998765
Q ss_pred ccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc--ceEEEEecCccceEEE
Q psy12061 379 EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE--TAVYYLSRTTRNWALI 456 (626)
Q Consensus 379 ~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~~i 456 (626)
... ..+....|+.+|.++.+...+ +++.|+|+++.. .+.+|.|+|+....... .............+.+
T Consensus 91 ~~~-~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~-------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (290)
T 3l5i_A 91 VLT-IPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE-------SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLR 161 (290)
T ss_dssp EEE-ECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS-------CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECC
T ss_pred eEE-eecccccCCCccceeEEEeCC-CeEEEEEeCCCC-------CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEe
Confidence 322 222222445477778777654 799999999863 48899999987765532 1122233455566788
Q ss_pred eCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEe
Q psy12061 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEV 536 (626)
Q Consensus 457 ~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~ 536 (626)
.+|+|++.|.|+|+|+|..|.|+ +..+.+.|.+..|..+| .+.+...+.+++.|+|+++++.+.+|.|.+|.|+|+..
T Consensus 162 ~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~ 239 (290)
T 3l5i_A 162 GNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTI 239 (290)
T ss_dssp SCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEET
T ss_pred cCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeC
Confidence 99999999999999999999888 45566778888887666 77788889999999999766777899999999998876
Q ss_pred ccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 537 DQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
++. ..........+++.|.+|.|++.|.|+|+|+|.+| |++| +.+.|+|.
T Consensus 240 ~~~----~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s-~~~~~~T~ 289 (290)
T 3l5i_A 240 IGN----ETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDG-PEFTFTTP 289 (290)
T ss_dssp TSC----CEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEEC-CCEEEECC
T ss_pred CCC----eEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCC-CceEeecC
Confidence 543 23445577888999999999999999999999999 8777 44667764
No 15
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2e-28 Score=258.07 Aligned_cols=499 Identities=15% Similarity=0.127 Sum_probs=302.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc-CCcEEEccCCCCCCEEEEEEEEcCCCCce-eeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDE-SKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~-~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 79 (626)
+.+|+.++|.|.+.| |.|.|.|+|||..+..+.|+.+.. +++|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..
T Consensus 123 v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 201 (642)
T 1e07_A 123 VEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLY 201 (642)
T ss_pred EecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEe
Confidence 357899999999999 899999999999998888887765 45799999999999999999999988743 457899987
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 159 (626)
+|......|....+.+|++++|.|.+.+.|.| .+.|++||..+.. +..|.|.+++.+|+|.|+|
T Consensus 202 ~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~--~i~W~~~g~~i~~--------------~~~L~i~~~~~~d~G~Y~C 265 (642)
T 1e07_A 202 GPDAPTISPLNTSYRSGENLNLSCHAASNPPA--QYSWFVNGTFQQS--------------TQELFIPNITVNNSGSYTC 265 (642)
T ss_pred CCCCcEEecCCcccccCCEEEEEEEcCCCCCc--EEEEEECCeEccc--------------CCceEEecccccCCeEEEE
Confidence 77665556777889999999999999888876 5699999988742 3579999999999999999
Q ss_pred EEEeCCCceEE--EEEEEEeCCCCCCCce---EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceee
Q psy12061 160 VVKSTVGKIST--KTTVIVEGPPGLPGGV---QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIG 234 (626)
Q Consensus 160 ~a~n~~g~~~~--~~~l~v~~~P~~p~~~---~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~ 234 (626)
.|.|..|.... .+.|.|..+|..|... .........+.|.|..... +. .+.|..++. .+..
T Consensus 266 ~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~---p~---~v~W~~~g~--------~l~~ 331 (642)
T 1e07_A 266 QAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQ---NT---TYLWWVNNQ--------SLPV 331 (642)
T ss_pred EEEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCC---Cc---cEEEEECCc--------cCCC
Confidence 99999887644 4566676655444210 0112234568888885422 21 233333221 1110
Q ss_pred ee-eeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCC
Q psy12061 235 KE-VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPR 313 (626)
Q Consensus 235 ~~-~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~ 313 (626)
.. .........+.+.+ +...+.+.|+|.|.|..|..........+...+..+...|....+.. ...+.|.....
T Consensus 332 ~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~--g~~~~l~C~~~-- 406 (642)
T 1e07_A 332 SPRLQLSNDNRTLTLLS-VTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRP--GVNLSLSCHAA-- 406 (642)
T ss_pred cCCEEEeCCCCEEEEec-cCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecC--CCcEEEEEEcC--
Confidence 00 00001223566666 89999999999999998854322111122222222222333333332 34566666541
Q ss_pred CCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCC
Q psy12061 314 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVA 393 (626)
Q Consensus 314 ~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~ 393 (626)
+.. .. .+.|.+.+.. .. ....+.+.++.+.....|+|.|.|..|....+..+.+..... +. +
T Consensus 407 --g~p-~~--~i~W~~~g~~------~~-----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~-~~-~ 468 (642)
T 1e07_A 407 --SNP-PA--QYSWLIDGNI------QQ-----HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAE-LP-K 468 (642)
T ss_pred --ccC-CC--eEEEEECCEE------cC-----CCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEecc-CC-C
Confidence 111 11 5677665511 00 113466788888888899999999998766555444433221 11 2
Q ss_pred CCce---EEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEE
Q psy12061 394 PQGV---FSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470 (626)
Q Consensus 394 p~~~---~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~ 470 (626)
|... .........+.|.+..... .-.+.|+..+.................+.|.++.......++..
T Consensus 469 p~i~~~~~~~v~~g~~v~l~C~~~~~----------~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 538 (642)
T 1e07_A 469 PSISSNNSKPVEDKDAVAFTCEPEAQ----------NTTYLWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCG 538 (642)
T ss_pred ceEecCCceeecCCCeEEEEEECCCC----------CcEEEEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEE
Confidence 2110 1112245567777765421 12344444332211111111112234588888888777777888
Q ss_pred EeeCCCCCCC-CccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeee
Q psy12061 471 AYNNAGEGPE-SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP 549 (626)
Q Consensus 471 a~~~~g~s~~-s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~ 549 (626)
|.|..|.... +..+.+...+..+...|.+..+ .....+.|... ....+ .. .|.|+..+....
T Consensus 539 a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v--~~g~~~~l~C~--~~g~p--~p---~v~W~~~g~~i~-------- 601 (642)
T 1e07_A 539 IQNSVSANRSDPVTLDVLYGPDTPIISPPDSSY--LSGANLNLSCH--SASNP--SP---QYSWRINGIPQQ-------- 601 (642)
T ss_pred eEcCCCCccCCCEEEEEEeCCCcceecCCceeE--EcCCcEEEEEE--eccCC--CC---eEEEEECCEECc--------
Confidence 8898875322 2223333222222222333332 23456677766 21111 11 344443322110
Q ss_pred cCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 550 VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 550 ~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
......|.++.+...-.|+..|.|..|....+
T Consensus 602 --~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s 633 (642)
T 1e07_A 602 --HTQVLFIAKITPNNNGTYACFVSNLATGRNNS 633 (642)
T ss_pred --cCceEEECcccccCCeEEEEEEEecccCccee
Confidence 12357788888888888999999999976544
No 16
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.7e-30 Score=268.85 Aligned_cols=342 Identities=18% Similarity=0.303 Sum_probs=220.4
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc---cCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF---ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~---~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
.+|+.++|.|.+.|.|+|+|.|+|||..|..+.++... ..++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 114 ~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 193 (570)
T 3b43_A 114 TLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSE 193 (570)
T ss_dssp ETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcC
Confidence 46999999999999999999999999999876665432 235799999999999999999999999988888888764
Q ss_pred --CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cCCeEEEeecCCCCCE
Q psy12061 80 --GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADAG 155 (626)
Q Consensus 80 --~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g 155 (626)
.|+.+...|.+..+.+|++++|.|.+.+.|.| ++.|+|+|..+.... ..++.. ....|.|.+++.+|+|
T Consensus 194 ~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p--~i~W~k~g~~i~~~~-----~~~~~~~~~~~~L~i~~v~~~D~G 266 (570)
T 3b43_A 194 HEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPI--KITWAKDNREIRPGG-----NYKMTLVENTATLTVLKVTKGDAG 266 (570)
T ss_dssp CCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCC--EEEEEETTEECCTTS-----SEEEEEETTEEEEEESSBCGGGCE
T ss_pred CCCCCccccCCceeEecCCCeEEEEEEEEECCCC--EEEEEECCEECcCCC-----cEEEEEECCEEEEEEcccCcccCE
Confidence 45555556778889999999999999999876 569999999986542 112222 3468999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCCCCCCce--EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeeccee
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~--~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~ 233 (626)
.|+|.|.|..|..+..+.|.|..+|.....+ .........+.|.|... +.+... +. |.+.+..+.
T Consensus 267 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~---g~P~p~--v~--------W~k~~~~l~ 333 (570)
T 3b43_A 267 QYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG---GSPEIK--VL--------WYKDETEIQ 333 (570)
T ss_dssp EEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEE---SSSSCE--EE--------EEETTEECC
T ss_pred EEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEe---eCCCCE--EE--------EeECCEECC
Confidence 9999999999999999999998877421110 00112334455555532 111111 12 222211110
Q ss_pred ee---eeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEee
Q psy12061 234 GK---EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEP 310 (626)
Q Consensus 234 ~~---~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~ 310 (626)
.. ..........+.+.+ +...+.+.|+|.|.|..|....+... .+..++.. ...|..+.+..+ ..+.|....
T Consensus 334 ~~~~~~~~~~~~~~~L~i~~-v~~~D~G~Y~C~a~N~~g~~~~~~~l-~V~~~P~~-~~~~~~~~~~~G--~~v~l~C~~ 408 (570)
T 3b43_A 334 ESSKFRMSFVESVAVLEMYN-LSVEDSGDYTCEAHNAAGSASSSTSL-KVKEPPVF-RKKPHPVETLKG--ADVHLECEL 408 (570)
T ss_dssp CSSSEEEEEETTEEEEEEES-CCGGGCEEEEEEEEBTTBCCEEEEEE-CEECCCEE-CSCCCCEEECTT--CCEEEEEEE
T ss_pred CCCcEEEEEECCEEEEEECC-CCcccCEEEEEEEEeCCCEEEEEEEE-EecCCCee-ecCCCceeecCC--CEEEEEEEE
Confidence 00 000011223456655 99999999999999999865432221 12211111 123334444333 445555554
Q ss_pred CCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCC
Q psy12061 311 LPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376 (626)
Q Consensus 311 ~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~ 376 (626)
. +. +. -.|.|.+.+..-..........+.....+.+.++.......|.|.|.|..|...
T Consensus 409 ~----g~-P~--p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~ 467 (570)
T 3b43_A 409 Q----GT-PP--FQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDT 467 (570)
T ss_dssp E----SS-SS--CCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred e----cC-CC--CEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEE
Confidence 1 11 11 145666655110000000111111234577888888888899999999998654
No 17
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=100.00 E-value=5e-33 Score=299.38 Aligned_cols=506 Identities=15% Similarity=0.166 Sum_probs=276.3
Q ss_pred CCcEEEccCCCCCCEEEEE--EEEcCCCCc-eeeEEEEEEeCCc-eeeeCCCceEEecCCcEEE--EEEecccCCcceeE
Q psy12061 42 NGNLLISPVSRDDSGIYSC--TATNVHGMD-ESKGRLIVLHGPS-YYEQLPPKITIAAHRNLQL--RCSAHTEELLDVAY 115 (626)
Q Consensus 42 ~g~L~i~~v~~~d~G~Y~C--~a~n~~g~~-~~~~~l~v~~~p~-~~~~~~~~~~v~~g~~~~l--~C~~~~~p~p~~~i 115 (626)
+|+|.|.... |. .| .+.+..+.. .....|.|..... .....++++.+..|+.+.+ .|.+.-... .++.
T Consensus 337 ~G~L~I~~~~----g~-~~~~~~~~~l~~v~~Itg~L~i~~~~~l~~l~~~~nL~~I~g~~~~~~~~~l~~~~n~-~l~~ 410 (897)
T 2dtg_E 337 NGSLIINIRG----GN-NLAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLRLIRGETLEIGNYSFYALDNQ-NLRQ 410 (897)
T ss_dssp SSCCEECCCC----CS-STHHHHHHHHTTCCEESSCEEEESCTTCSBGGGGTTCCEECCTTCBTTTEEEEEESCT-TCCB
T ss_pred CcEEEEEEcC----CC-CccHHHHhhccCcEEEeEEEEEEEeccccchhhccCccEEcCeeccCCCEEEEEEecc-Chhh
Confidence 5778887542 21 33 122344444 4456788875333 2234577888888988643 355443222 3444
Q ss_pred EEeeCCEEeccccCCccCCCeeEec-CCeEEEeecCCC--CCEeEEEEEE-----eCCCceEEEEEEEEeCCCCCCCceE
Q psy12061 116 IWTHNGVRIGNMDLNELETPNINID-GGLLEITNASFA--DAGEYECVVK-----STVGKISTKTTVIVEGPPGLPGGVQ 187 (626)
Q Consensus 116 ~W~~~~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~--d~g~Y~C~a~-----n~~g~~~~~~~l~v~~~P~~p~~~~ 187 (626)
.|.++.+.+... .+++.+. +..|-+..+..- ..|.|.+... ...|.. ..-...|.+++
T Consensus 411 l~~~~~~~l~i~------~G~v~i~~n~~LC~~~i~~~~~~~g~~~~~~~~di~~~tNgd~--------~~C~~~~~~l~ 476 (897)
T 2dtg_E 411 LWDWSKHNLTIT------QGKLFFHYNPKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQ--------ASCENELLKFS 476 (897)
T ss_dssp SCCTTSCCCBCS------SCEEEEESBTTSCHHHHHHHHHHTTCSSSCCSSSBCSTTBSTT--------CCCSCCBCCCS
T ss_pred hCccccCceEEc------cCEEEEEeCCcccccccccHHHhcCCcccccccceehhhcCCc--------cccccceeEEE
Confidence 688776544321 1333332 222222211110 1233333110 011110 00113466888
Q ss_pred EEEEeccceEEEEecCCC-CCCcccEEEEEEeec--------------CCCCceEeecceeeeeee-ccCCceeEEEEee
Q psy12061 188 VVEVHKTSATIQWTDGAT-NGRPITHYKIIARTN--------------WNSTWFNVSEHVIGKEVD-RYTGRKEASIENV 251 (626)
Q Consensus 188 ~~~~~~~~~~l~W~~~~~-~~~~~~~y~v~~~~~--------------~~~~w~~~~~~~~~~~~~-~~~~~~~~~i~~~ 251 (626)
+...+++++.|+|++|.. ++.++.+|.|+++.. +...|............. .......+.+.+
T Consensus 477 v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~- 555 (897)
T 2dtg_E 477 YIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRG- 555 (897)
T ss_dssp EEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECS-
T ss_pred EEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccccceEeCC-
Confidence 899999999999999864 456899999998865 234676543322111000 000123455555
Q ss_pred ccCCceEEEEEEE-ecCCcc----CCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEE
Q psy12061 252 LVPWSTYEFKVIA-GNELGY----GEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIF 326 (626)
Q Consensus 252 l~~~~~y~~~v~a-~n~~g~----~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~ 326 (626)
|.|++.|.|+|+| .|..|. +.++... .+++...+| .+|.++.+...+.+++.|+|++ +...++.+.+|+|+
T Consensus 556 L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v-~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~p--P~~~nG~I~~Y~V~ 631 (897)
T 2dtg_E 556 LKPWTQYAIFVKTLVTFSDERRTYGAKSDII-YVQTDATNP-SVPLDPISVSNSSSQIILKWKP--PSDPNGNITHYLVF 631 (897)
T ss_dssp CCSSCBCCBEEEECCCCCSSCCCCCCBCCCB-CCBCCCCCC-CCCEEEEEEECSSSCEEEEEEC--CCCSSSSCSEEECC
T ss_pred CCCCcEEEEEEEEEEeccCCccccCCccceE-EEECCCCCC-cCCcceEEEeCCCCEEEEEEeC--CCCCCCCeeEEEEE
Confidence 9999999999999 999987 4445443 566766666 5899999999999999999998 45677889999999
Q ss_pred EEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecce
Q psy12061 327 WRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTA 406 (626)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~s 406 (626)
|+..+...... ..+ ......|.|++.|.++|.|.+..+.+..+......+....|. .|..+. ...+.++
T Consensus 632 ~~~~~~~~~~~-----~~~----~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~-~p~~~~-~~~~~~s 700 (897)
T 2dtg_E 632 WERQAEDSELF-----ELD----YCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPK-TDSQIL-KELEESS 700 (897)
T ss_dssp EEEECCCCSCT-----TCS----SSCSCCCCCC-----------------------------------------------
T ss_pred EEECCCCccce-----ecc----cccCCCcCCccccceeeecccccCcccccccccCCCccCCcC-cccchh-hhhhhhh
Confidence 98765322110 000 112345789999999999999877655443222222233444 333443 4567789
Q ss_pred EEEEeeeccccccccceeeEEEE---EEEEe--cCC----CccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCC
Q psy12061 407 INVTWNPIELIRENIRGRLIGHR---IKYWK--EDN----PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE 477 (626)
Q Consensus 407 i~l~W~~~~~~~~~~~~~i~~Y~---v~~~~--~~~----~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~ 477 (626)
+.++|+.+.... +..+. .++.. ..+ ...... .......++++.+|+|++.|.|+|+|.|..|.
T Consensus 701 ~~~~W~~~~~n~------v~~~~p~~~r~~l~~~~n~t~~~~~~~~--~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~ 772 (897)
T 2dtg_E 701 FRKTFEDYLHNV------VFVPRPSRKRRSLGDVGNAGNNEEHRPF--EKVVNKESLVISGLRHFTGYRIELQACNQDTP 772 (897)
T ss_dssp -----------------------------------------CCSCS--CEECSCSEEEECSSCSSCEEEECCEEESCSSS
T ss_pred eeeeEEEccCce------EEccCCCcccccccccccccCccccceE--EecCCceEEEECCCCCCcEEEEEEEEEeCCCC
Confidence 999999765311 11110 00000 000 000000 11234467999999999999999999999998
Q ss_pred CCC---CccEEEeecCC-CCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCcc
Q psy12061 478 GPE---SERYLERTYRK-APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNT 553 (626)
Q Consensus 478 s~~---s~~~~~~t~~~-~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~ 553 (626)
++. +..+.++|.+. .++.+|.++++...+.+++.|+|+ +|...+|.|.+|.|+|+..+................
T Consensus 773 g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~--~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~ 850 (897)
T 2dtg_E 773 EERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQ--EPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALE 850 (897)
T ss_dssp SCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCC--CCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCT
T ss_pred CCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEEC--CCCCCCCCEEEEEEEEEECCCcceEEEEeeeeeccc
Confidence 764 55677888753 334578888888888999999999 667789999999999876654211111111123467
Q ss_pred ceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecccc
Q psy12061 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595 (626)
Q Consensus 554 ~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~~ 595 (626)
+.+.+.+|.|+ .|.|+|+|.|.+|.|++|+++ .|++.+.+
T Consensus 851 ~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v-~~~T~~~p 890 (897)
T 2dtg_E 851 RGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPT-YFYVTDYL 890 (897)
T ss_dssp TCCCCCSCCSS-EECCCCCEEETTBCCCCCCCC-EECCCCCC
T ss_pred CcEEECCCCCC-cEEEEEEEEeCCcccCCCCCE-EEEeCCCC
Confidence 78999999999 699999999999999999765 57666543
No 18
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.98 E-value=9.1e-30 Score=239.75 Aligned_cols=267 Identities=19% Similarity=0.281 Sum_probs=205.2
Q ss_pred CCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC-CCcceeeeeeeecceeeEEEEeCCCcceeEE
Q psy12061 284 ADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362 (626)
Q Consensus 284 ~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y 362 (626)
..+++.+|.++.+...+.+++.|+|+++ ++.+.+|.|+|+..+ ...|...... .....+.+.+|.|++.|
T Consensus 17 ~~~~p~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y 87 (290)
T 3r8q_A 17 QGPAIPAPTDLKFTQVTPTSLSAQWTPP-----NVQLTGYRVRVTPKEKTGPMKEINLA----PDSSSVVVSGLMVATKY 87 (290)
T ss_dssp ---CCCCCEEEEEEEECSSCEEEEEECC-----SSCCCEEEEEEEESSSSSCCEEEEEC----TTCCEEEECSCCSSCEE
T ss_pred eCCCCCCCCceEEEECCCCEEEEEEeCC-----CCCeeEEEEEEEeCCCCCceEEEEcC----CCccEEEeCCCCCCCEE
Confidence 3455678999999999999999999983 357899999999876 4455544332 13456789999999999
Q ss_pred EEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccce
Q psy12061 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA 442 (626)
Q Consensus 363 ~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~ 442 (626)
.|+|+|.|..|.+.++. ..+.+.+.. . +|.++.+...+.+++.|+|+++. +.+.+|.|+|+..+.....
T Consensus 88 ~~~V~a~~~~g~s~~s~-~~~~t~~~~-~-~P~~l~~~~~~~~sv~l~W~~p~-------~~~~~Y~v~~~~~~~~~~~- 156 (290)
T 3r8q_A 88 EVSVYALKDTLTSRPAQ-GVVTTLENV-S-PPRRARVTDATETTITISWRTKT-------ETITGFQVDAVPANGQTPI- 156 (290)
T ss_dssp EEEEEEEETTEECCCEE-EEEECCCCC-C-CCEEEEEEEECSSCEEEEEECCS-------CCCCEEEEEEEESSSCCCE-
T ss_pred EEEEEEEeCCCCCCCcc-eeEecCCCC-C-CCceeEEEEcCCCeEEEEEeCCC-------CcccEEEEEEEECCCCcce-
Confidence 99999999999988764 445554443 3 78899999999999999999873 4588999999876654322
Q ss_pred EEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCC
Q psy12061 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522 (626)
Q Consensus 443 ~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~ 522 (626)
..........+.+.+|.|++.|.|+|+|.|..|.|.... +.+.|. +.+|.++.+...+.+++.|+|++ |.
T Consensus 157 -~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t~----p~~P~~l~~~~~~~~sv~l~W~~--p~-- 226 (290)
T 3r8q_A 157 -QRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVV-IDASTA----IDAPSNLRFLATTPNSLLVSWQP--PR-- 226 (290)
T ss_dssp -EEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECC----CCCCEEEEEEEEETTEEEEEEEC--CS--
T ss_pred -EEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEE-EEecCC----CCCCCccEEEeeCCCEEEEEEeC--CC--
Confidence 223345566799999999999999999999998876542 334443 34788999998999999999994 43
Q ss_pred CCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 523 ~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
+.+.+|.|+|+..+.... ..........+++.+.+|.|++.|.|+|+|++..|.|++.
T Consensus 227 -~~~~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 284 (290)
T 3r8q_A 227 -ARITGYIIKYEKPGSPPR--EVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEPL 284 (290)
T ss_dssp -SCCCEEEEEEECTTSCCE--ECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred -CcccEEEEEEEeCCCCcc--eeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCcc
Confidence 578999999876544321 1112334577899999999999999999999999988743
No 19
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.97 E-value=2.9e-30 Score=244.42 Aligned_cols=277 Identities=15% Similarity=0.181 Sum_probs=201.8
Q ss_pred CCCceEEecCCcEEEEEEeccc-------CCcceeEEEeeCCEEeccccCCccCCCeeEe-cCCeEEEeecCCCCCEeEE
Q psy12061 87 LPPKITIAAHRNLQLRCSAHTE-------ELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGGLLEITNASFADAGEYE 158 (626)
Q Consensus 87 ~~~~~~v~~g~~~~l~C~~~~~-------p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~ 158 (626)
.|++..+..|++++|.|.+.+. |.| .|.|+|||..+.... .++.. ..+.|.|.+++..| |.|+
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p--~i~W~~~g~~i~~~~------~~~~~~~~~~L~i~~~~~~~-g~Y~ 80 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNAN--YIVWKTNHFTIPKEQ------YTIINRTASSVTFTDIASLN-IQLT 80 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGG--GEEEEETTEECCGGG------CEEEETTEEEEEECSCCCSE-EEEE
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChh--heEEEECCEECChhh------eeeeCCcEEEEEEcCcCCCc-eEEE
Confidence 4677889999999999999974 444 569999999886432 11111 13579999999885 9999
Q ss_pred EEEEeCCCc--eEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeee
Q psy12061 159 CVVKSTVGK--ISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236 (626)
Q Consensus 159 C~a~n~~g~--~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~ 236 (626)
|.|.|..+. ....+.|.+..+|.+|.++.+...+.+++.|+|+++.+++. ...|.|+++..+...|.-...
T Consensus 81 C~a~~~g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~-~~~Y~v~~~~~~~~~~~~~~~------ 153 (303)
T 1i1r_A 81 CNILTFGQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKFADCKAK------ 153 (303)
T ss_dssp EEEEETTTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEECCCEECC------
T ss_pred EecccCCCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCC-CcCEEEEEEecCCCCccCCCc------
Confidence 999885322 23456788899999999999988888999999999877654 579999998654332221110
Q ss_pred eeccCCceeEEEEeec-cCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecC--CcCeEEEEEeeCCC
Q psy12061 237 VDRYTGRKEASIENVL-VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG--KIGDLSISWEPLPR 313 (626)
Q Consensus 237 ~~~~~~~~~~~i~~~l-~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~--~~~~v~l~W~~~~~ 313 (626)
......+.+.+ | .+++.|.|+|.|.|..|.+.++.. .+.+....++.+|.++.+... +.+++.|+|++ +
T Consensus 154 ---~~~~~~~~i~~-L~~p~t~Y~f~V~A~N~~G~~~s~~~--~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~--p 225 (303)
T 1i1r_A 154 ---RDTPTSCTVDY-STVYFVNIEVWVEAENALGKVTSDHI--NFDPVYKVKPNPPHNLSVINSEELSSILKLTWTN--P 225 (303)
T ss_dssp ---SSCTTEEECSS-CCCTTSCEEEEEEEEETTEEEECCCE--EECGGGGEECCCCEEEEEECCSSSSSCEEEEEEC--C
T ss_pred ---CCCceEEEECC-cCcccccEEEEEEEEcCCCCcccCCE--EECHHHeEecCCCcceEEEEecCCCCEEEEEECC--C
Confidence 01223555554 9 899999999999999998753322 222222345578888887643 67899999998 3
Q ss_pred CCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCC---CccEEEEccCC
Q psy12061 314 EKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE---SEVVTIFSAED 388 (626)
Q Consensus 314 ~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~---s~~~~~~t~~~ 388 (626)
...++.+.+|.|+|+..+...|....... .......+.+.+|.|++.|.|+|+|.|..|.|.+ |..+.++|.++
T Consensus 226 ~~~~~~i~~Y~v~y~~~~~~~w~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 226 SIKSVIILKYNIQYRTKDASTWSQIPPED-TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp GGGGTSCEEEEEEEEETTCSSCEECCGGG-GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred CCCCcccEEEEEEEEeCCCCCceEEcccc-CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence 44567899999999998877787543211 0123346889999999999999999999987655 56677777654
No 20
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.97 E-value=3.5e-29 Score=235.07 Aligned_cols=260 Identities=15% Similarity=0.193 Sum_probs=200.0
Q ss_pred CCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC-CCcceeeeeeeecceeeEEEEeCCCcceeEEEEE
Q psy12061 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365 (626)
Q Consensus 287 p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~ 365 (626)
++.+|.++.+...+.+++.|+|+++. +.+.+|.|+|+... ...|..... ......+.+.+|.|++.|.|+
T Consensus 14 ~p~~P~~l~~~~~~~~sv~l~W~~~~-----~~~~~Y~v~~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~ 84 (283)
T 1tdq_A 14 VIDGPTQILVRDVSDTVAFVEWTPPR-----AKVDFILLKYGLVGGEGGKTTFRL----QPPLSQYSVQALRPGSRYEVS 84 (283)
T ss_dssp SSCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEESSSSCCCEEEEE----CTTCSEEEECSCCTTCEEEEE
T ss_pred CCCCCcEEEEEecCCCeEEEEEECCC-----CceeEEEEEEEEecCCCCcEEEEe----CCCCCEEEecCCCCCCEEEEE
Confidence 45788999999889999999999832 56889999998654 344433322 123456789999999999999
Q ss_pred EEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEE
Q psy12061 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445 (626)
Q Consensus 366 v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~ 445 (626)
|+|.|..|.+.+ ....+.+ .| .+|.++++...+.+++.|+|+++. +.+.+|.|+|+..+.......
T Consensus 85 V~a~~~~g~s~~-~~~~~~t---~p-~~P~~l~~~~~~~~sv~l~W~~p~-------~~i~~Y~v~~~~~~~~~~~~~-- 150 (283)
T 1tdq_A 85 ISAVRGTNESDA-SSTQFTT---EI-DAPKNLRVGSRTATSLDLEWDNSE-------AEAQEYKVVYSTLAGEQYHEV-- 150 (283)
T ss_dssp EEEEETTEECCC-EEEEEEC---CC-CCCEEEEEEEECSSCEEEEEECCS-------SCCSEEEEEEEETTCCCCEEE--
T ss_pred EEEECCCCCCCC-eeEEEEC---CC-CCCCceEEEecCCCeEEEEecCCC-------CCccEEEEEEEeCCCCcceEE--
Confidence 999998887653 3333444 23 378899999999999999999886 348899999987765433222
Q ss_pred EecCc---cceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCC
Q psy12061 446 LSRTT---RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE 522 (626)
Q Consensus 446 ~~~~~---~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~ 522 (626)
..... ...+.+.+|+|++.|.|+|+|.|..|.|.... ..+.+. | .+|.++.+...+.+++.|+|+ ++
T Consensus 151 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t~---~-~~P~~l~~~~~~~~sv~l~W~--~p--- 220 (283)
T 1tdq_A 151 LVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT-MNARTE---L-DSPRDLMVTASSETSISLIWT--KA--- 220 (283)
T ss_dssp EEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEECC---C-CCCEEEEEEEECSSCEEEEEE--CC---
T ss_pred ECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE-EEecCC---C-CCCCccEEeEecCCEEEEEEe--CC---
Confidence 22233 56799999999999999999999988765432 223332 2 367899999989999999999 43
Q ss_pred CCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 523 EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 523 ~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
++.+.+|.|+|+..++. ..........+.+.+.+|.|++.|.|+|+|+|..|.|+++
T Consensus 221 ~~~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 221 SGPIDHYRITFTPSSGI----SSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp CSCCSEEEEEEECSSSC----CEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred CCcccEEEEEEEcCCCC----eeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 47889999998765543 2344556788899999999999999999999999998866
No 21
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.97 E-value=1.4e-29 Score=240.81 Aligned_cols=281 Identities=14% Similarity=0.164 Sum_probs=201.6
Q ss_pred CCceEEecCCcEEEEEEeccc--CC-cceeEEEeeCCEEeccccCCccCCCeeEecC---CeEEEeecCCCCCEeEEEEE
Q psy12061 88 PPKITIAAHRNLQLRCSAHTE--EL-LDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEITNASFADAGEYECVV 161 (626)
Q Consensus 88 ~~~~~v~~g~~~~l~C~~~~~--p~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~~~~~~d~g~Y~C~a 161 (626)
|++..+..|++++|.|.+.+. +. |...|.|++||..+..... +....+ +.|.|.+++..|+|.|.|.+
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~~~------~~~~~~~~~~~L~i~~~~~~d~g~y~c~~ 80 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQ------QRLSDGTQESIITLPHLNHTQAFLSCSLN 80 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTCEE------CCCSSSCCCEEEEESCCCSSEEEEEEEEE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCccce------EEEecCeEEEEEEEeccCCCccceEEeee
Confidence 457789999999999999997 21 2245699999998754321 111122 57999999999999999998
Q ss_pred EeCCCceEEEEEEEEeCCCCCCCceEEEEEe-ccceEEEEecCCCCCCcccEEEEEEeecCC------CCceEeecceee
Q psy12061 162 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGATNGRPITHYKIIARTNWN------STWFNVSEHVIG 234 (626)
Q Consensus 162 ~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~-~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~------~~w~~~~~~~~~ 234 (626)
.+..+.....+.|.+..+|.+|.++.|.... ..++.++|+++.+++.+ ..|.|+++..+. ..|..+..
T Consensus 81 ~~~~~~~~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~-~~Y~l~~~~~~~~~~~~~~~~~~~~~---- 155 (313)
T 2d9q_B 81 WGNSLQILDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLP-TSFTLKSFKSRGNCQTQGDSILDCVP---- 155 (313)
T ss_dssp SSSSEEEEEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSC-CEEEEEEEECCTTSCSCCCCEEEECC----
T ss_pred cCCCceeEEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCc-eeEEEEEEecCCCcccCCcccccCCC----
Confidence 7766666778899999999999999998774 68999999998775554 579999886542 12222211
Q ss_pred eeeeccCCceeEEEEe-eccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecC------CcCeEEEE
Q psy12061 235 KEVDRYTGRKEASIEN-VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG------KIGDLSIS 307 (626)
Q Consensus 235 ~~~~~~~~~~~~~i~~-~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~------~~~~v~l~ 307 (626)
..+...+.+.. +|.+++.|.|+|.|.|..|.+.+. .. .+.+....++.+|.++.+... +.+++.|+
T Consensus 156 -----~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~-~~-~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~ 228 (313)
T 2d9q_B 156 -----KDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSP-QL-CLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLS 228 (313)
T ss_dssp -----CTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECC-CE-EECGGGGEECCCCEEEECCC-------CCSCEEEE
T ss_pred -----CCCCcEEEECccccccceeEEEEEEEECCCCCccCc-cE-EEehhheeccCcCceeEEEEecccccCCCCeEEEE
Confidence 12223444432 499999999999999999986322 21 233333345578888887765 46899999
Q ss_pred EeeCCCCCcccCcceEEEEEE-ecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCC---CCCccEEE
Q psy12061 308 WEPLPREKQNAPNIYYKIFWR-KKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG---PESEVVTI 383 (626)
Q Consensus 308 W~~~~~~~~~~~~~~y~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~---~~s~~~~~ 383 (626)
|+++. ..+..+.+|+|+|+ ..+...|...... ......+.+.+|.|++.|.|+|+|.|..|.| .||..+.+
T Consensus 229 W~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~~~~~---~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~ 303 (313)
T 2d9q_B 229 WEPWQ--PGLHINQKCELRHKPQRGEASWALVGPL---PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLEL 303 (313)
T ss_dssp EECCG--GGTTSCEEEEEEEEESSSCCCCEEEEEE---CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEE
T ss_pred ECCCC--CCCceeEEEEEEEccCCCCCCcEEcccc---cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccce
Confidence 99843 33344579999999 5666778765332 1234678899999999999999999987766 46777888
Q ss_pred EccCCCCC
Q psy12061 384 FSAEDMPQ 391 (626)
Q Consensus 384 ~t~~~~p~ 391 (626)
+|.+++|.
T Consensus 304 ~T~~~~P~ 311 (313)
T 2d9q_B 304 RTTERAAA 311 (313)
T ss_dssp CCCC----
T ss_pred eCCccCCC
Confidence 88887664
No 22
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=99.97 E-value=5.9e-28 Score=236.17 Aligned_cols=350 Identities=15% Similarity=0.165 Sum_probs=243.1
Q ss_pred CCCceEEec-CC--cEEEEEEeccc-CCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEE
Q psy12061 87 LPPKITIAA-HR--NLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVK 162 (626)
Q Consensus 87 ~~~~~~v~~-g~--~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~ 162 (626)
+|.++.+.. ++ .+.|.+....+ +.....|.|...+..-.... ..........+.|.++.....+.|++.|.
T Consensus 4 ~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 78 (368)
T 1fnf_A 4 PPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSL-----EEVVHADQSSCTFDNLSPGLEYNVSVYTV 78 (368)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCE-----EEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred CCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCcee-----EEEecCCcCEEEECCCCCCCEEEEEEEEE
Confidence 455655553 22 37888876542 22223344544321100000 00112245678899999999999999999
Q ss_pred eCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCC-CCceEeecceeeeeeeccC
Q psy12061 163 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYT 241 (626)
Q Consensus 163 n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~ 241 (626)
|..|..... ...+...+.+|.++.+...+..++.|+|+++.. ..+.+|.|+++.... ..|...... .
T Consensus 79 ~~~g~s~~~-~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~~--~~~~~Y~v~~~~~~~~~~~~~~~~~---------~ 146 (368)
T 1fnf_A 79 KDDKESVPI-SDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPPS--IDLTNFLVRYSPVKNEEDVAELSIS---------P 146 (368)
T ss_dssp ETTEECCCE-EEEECCCCCCCEEEEEESCCSSCEEEEEECCTT--CCCSEEEEEEEETTCTTCCEEEEEC---------T
T ss_pred cCCCccCce-eeeecCCCcCCceeEEEEcCCCeEEEEeeCCCC--CCCcEEEEEEEECCCCCccEEEEcC---------C
Confidence 998854332 334444555888999988899999999998733 568899999987654 345443211 2
Q ss_pred CceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcc
Q psy12061 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNI 321 (626)
Q Consensus 242 ~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~ 321 (626)
....+.+.+ |.+++.|.|+|+|.|..|.+.+... .. ..++.+|.++.+...+.+++.|+|+++. +.+.
T Consensus 147 ~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~s~~~~~--~~----~~~~~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~ 214 (368)
T 1fnf_A 147 SDNAVVLTN-LLPGTEYVVSVSSVYEQHESTPLRG--RQ----KTGLDSPTGIDFSDITANSFTVHWIAPR-----ATIT 214 (368)
T ss_dssp TCCEEEECS-CCTTCEEEEEEEEEETTEECCCEEE--EE----ECCCCCCEEEEEESCCSSEEEEEEECCS-----SCCS
T ss_pred CcceEEecC-CCCCCEEEEEEEEEeCCCCCCCeEe--ee----cCCCCCCCccEEEEccCCEEEEEEeCCC-----CCcC
Confidence 233555555 9999999999999999997654221 11 2233578899998888999999999832 5688
Q ss_pred eEEEEEEecCC-CcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEE
Q psy12061 322 YYKIFWRKKND-TEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSR 400 (626)
Q Consensus 322 ~y~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~ 400 (626)
+|.|+|+..+. ..+...... .....+.+.+|.|++.|.|+|+|.|..|.+.++.. ...+ .|. +|.++.+.
T Consensus 215 ~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~~-~~~t---~p~-~P~~l~~~ 285 (368)
T 1fnf_A 215 GYRIRHHPEHFSGRPREDRVP----HSRNSITLTNLTPGTEYVVSIVALNGREESPLLIG-QQST---VSD-VPRDLEVV 285 (368)
T ss_dssp EEEEEEECSCCSSCCEEEEEE----TTCCEEEEESCCTTCEEEEEEEEEETTEECCCEEE-EEEC---CCC-SCEEEEEE
T ss_pred EEEEEEecCCCCCCccEEEeC----CCcCEEEECCCCCCCEEEEEEEEEeCCccCCcccc-cccC---CCC-CCCeeEEE
Confidence 99999987763 233322221 23356788999999999999999999998776532 2222 333 78899999
Q ss_pred eeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCC
Q psy12061 401 GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480 (626)
Q Consensus 401 ~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~ 480 (626)
..+.+++.|+|+++.. .+.+|.|+|+..+...... ..........+.+.+|+|++.|.|+|+|.|..|.|++
T Consensus 286 ~~~~~sv~l~W~~p~~-------~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G~g~~ 357 (368)
T 1fnf_A 286 AATPTSLLISWDAPAV-------TVRYYRITYGETGGNSPVQ-EFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPA 357 (368)
T ss_dssp EEETTEEEEEEECCSS-------CCSEEEEEEEETTCCSCCE-EEEEETTCCEEEECSCCTTCCEEEEEEEECCCSSSCC
T ss_pred ecCCCEEEEEeeCCCC-------ccceEEEEEEECCCCCccE-EEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCCcCcc
Confidence 8999999999998863 3789999998766543222 2233455677999999999999999999999999987
Q ss_pred Cc
Q psy12061 481 SE 482 (626)
Q Consensus 481 s~ 482 (626)
+.
T Consensus 358 s~ 359 (368)
T 1fnf_A 358 SS 359 (368)
T ss_dssp BC
T ss_pred cC
Confidence 75
No 23
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.97 E-value=8.9e-28 Score=235.47 Aligned_cols=352 Identities=16% Similarity=0.179 Sum_probs=246.6
Q ss_pred eCCCceEEec--CC-cEEEEEEeccc-CCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEE
Q psy12061 86 QLPPKITIAA--HR-NLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161 (626)
Q Consensus 86 ~~~~~~~v~~--g~-~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a 161 (626)
.+|.++.+.. .. .+.|.+..... +.....+.|...+..-.... ..........+.|.++.....+.|++.|
T Consensus 4 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 4 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSL-----EEVVHADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCE-----EEEEETTCCEEEECCCCTTCCEEEEEEE
T ss_pred CCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcce-----eEEcCCCccEEEEcCCcCCCEEEEEEEE
Confidence 3566666653 33 57777765432 12223355554332100000 0112225578999999999999999999
Q ss_pred EeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCc-eEeecceeeeeeecc
Q psy12061 162 KSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW-FNVSEHVIGKEVDRY 240 (626)
Q Consensus 162 ~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w-~~~~~~~~~~~~~~~ 240 (626)
.|..|............+| +|.++.+...+.+++.|+|+++. +..+.+|.|+++..+...+ ..... .
T Consensus 79 ~~~~g~s~~~~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~---------~ 146 (375)
T 3t1w_A 79 VKDDKESVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIFEDFV---------D 146 (375)
T ss_dssp EETTEECCCEEEEECCCCC-CCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCCSCEEEEE---------C
T ss_pred EcCCCCCCcEEeeEcCCCC-CCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCCceeEEEc---------C
Confidence 9987754443333333444 58899998999999999999874 3578999999987654322 21111 0
Q ss_pred CCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCc
Q psy12061 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 320 (626)
Q Consensus 241 ~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~ 320 (626)
.....+.+.+ |.+++.|.|+|+|.|..|.+.++.. ...+ .+ .+|.++.+...+.+++.|+|++++ ++.+
T Consensus 147 ~~~~~~~i~~-L~p~t~Y~~~V~a~~~~g~s~~s~~--~~~t---~~-~~p~~l~~~~~~~~si~l~W~~p~----~~~i 215 (375)
T 3t1w_A 147 SSVGYYTVTG-LEPGIDYDISVITLINGGESAPTTL--TQQT---AV-PPPTDLRFTNIGPDTMRVTWAPPP----SIDL 215 (375)
T ss_dssp TTCCEEEEEC-CCTTCEEEEEEEEEETTEECCCEEE--EEEC---CC-CCCEEEEEESCCSSCEEEEEECCS----SCCC
T ss_pred CCcceEEEeC-CCCCCEEEEEEEEEeCCcccCCeee--eeec---CC-CCCceeEEEecccCEEEEEEcCCC----CCCc
Confidence 2334566655 9999999999999999998876653 2333 22 378899998888999999999832 3668
Q ss_pred ceEEEEEEecC-CCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEE
Q psy12061 321 IYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFS 399 (626)
Q Consensus 321 ~~y~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~ 399 (626)
.+|.|+|+..+ ...|...... .....+.+.+|.|++.|.|+|+|.|..|.|.++. ....+ .|. +|.++.+
T Consensus 216 ~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~-~~~~t---~p~-~P~~l~~ 286 (375)
T 3t1w_A 216 TNFLVRYSPVKNEEDVAELSIS----PSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR-GRQKT---GLD-SPTGIDF 286 (375)
T ss_dssp CEEEEEEEEGGGTTCCEEEEEC----TTCCEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCC-CCEEEEE
T ss_pred cEEEEEEEeCCCCCCcEEEEcC----CCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCcee-eEEec---CCC-CCCccEe
Confidence 99999999876 3444433322 1335678999999999999999999999876543 33344 333 7889999
Q ss_pred EeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCC
Q psy12061 400 RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479 (626)
Q Consensus 400 ~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~ 479 (626)
...+.+++.|+|++|. +.+.+|.|+|+..+..... ...........+.+.+|+|++.|.|+|+|.|..|.|+
T Consensus 287 ~~~~~~sv~l~W~~p~-------~~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~ 358 (375)
T 3t1w_A 287 SDITANSFTVHWIAPR-------ATITGYRIRHHPEHFSGRP-REDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESP 358 (375)
T ss_dssp ESCCSSCEEEEEECCS-------SCCSEEEEEEEETTCCSSC-EEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eeccCCEEEEEECCCC-------cceeeEEEEEEECCCCCcc-eeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCCCC
Confidence 8889999999999874 5588999999887653222 2233345566799999999999999999999999987
Q ss_pred CCc
Q psy12061 480 ESE 482 (626)
Q Consensus 480 ~s~ 482 (626)
+..
T Consensus 359 p~s 361 (375)
T 3t1w_A 359 LLI 361 (375)
T ss_dssp CEE
T ss_pred cee
Confidence 653
No 24
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.97 E-value=3.8e-28 Score=228.88 Aligned_cols=276 Identities=14% Similarity=0.158 Sum_probs=202.6
Q ss_pred CCCCCCCceEEEEEe-----ccceEEEEecC--CCCCCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEe
Q psy12061 178 GPPGLPGGVQVVEVH-----KTSATIQWTDG--ATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN 250 (626)
Q Consensus 178 ~~P~~p~~~~~~~~~-----~~~~~l~W~~~--~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (626)
.+|..|.++...... .+++.|.|+++ .+.+..+.+|.|+++..+...+ ... .. ...+..
T Consensus 2 ~~Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~~~-~~~-----------~~--~~~~~~ 67 (290)
T 3l5i_A 2 DRPSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQ-NYT-----------VN--ATKLTV 67 (290)
T ss_dssp CCCSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSCCE-EEE-----------ES--SSEEEE
T ss_pred CCCCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcCce-eEe-----------cC--CcEEEE
Confidence 467777787664332 58999999973 3456788999999988654332 110 01 123434
Q ss_pred eccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEec
Q psy12061 251 VLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK 330 (626)
Q Consensus 251 ~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~ 330 (626)
|.+++.|.|+|.|.|..|.+.++.. ........++.++.++.+.... +++.|+|+++. . .+.+|.|+|+..
T Consensus 68 -l~p~t~Y~~~V~A~n~~G~s~~s~~--~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~--~---~i~~Y~v~~~~~ 138 (290)
T 3l5i_A 68 -NLTNDRYLATLTVRNLVGKSDAAVL--TIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPR--E---SVKKYILEWCVL 138 (290)
T ss_dssp -EECSSCEEEEEEEEESSCBCCCEEE--EECCTTCCCCCCCEEEEEEEET-TEEEEEEECCS--S---CCCEEEEEEEEE
T ss_pred -EcCCceEEEEEEEEcCCCCCCCceE--EeecccccCCCccceeEEEeCC-CeEEEEEeCCC--C---CCCcEEEEEEEC
Confidence 9999999999999999998865532 1222222455677788776654 69999999842 2 689999999987
Q ss_pred CCCc-----ceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecc
Q psy12061 331 NDTE-----FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNST 405 (626)
Q Consensus 331 ~~~~-----~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~ 405 (626)
+... |... .......+.+.+|.|++.|.|+|+|.|..|.|. +......+.+..|..+| .+.+...+.+
T Consensus 139 ~~~~~~~~~~~~~-----~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p-~~~~~~~~~~ 211 (290)
T 3l5i_A 139 SDKAPCITDWQQE-----DGTVHRTYLRGNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGP-TVRTKKVGKN 211 (290)
T ss_dssp CSSSCCCCEEEEE-----ETTCSEEECCSCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCC-CEEEEEECSS
T ss_pred CCCCCCCcCeEEc-----cCCCcceEEecCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCC-eeeEeeccCC
Confidence 6332 3222 123445677899999999999999999999887 45666678888887555 7788888999
Q ss_pred eEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEE
Q psy12061 406 AINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYL 485 (626)
Q Consensus 406 si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~ 485 (626)
++.|+|+++..... +|.|.+|.|+|+..+... ..........++++.+|+|++.|.|+|+|.|..| |+.|..+.
T Consensus 212 sv~l~W~~~~~~~~--~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~ 285 (290)
T 3l5i_A 212 EAVLEWDQLPVDVQ--NGFIRNYTIFYRTIIGNE---TAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFT 285 (290)
T ss_dssp CEEEEECCCCHHHH--SSCCCEEEEEEEETTSCC---EEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE-EEECCCEE
T ss_pred EEEEEEcCCChhcc--CCEEEEEEEEEEeCCCCe---EEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceE
Confidence 99999996543222 378999999998765432 1223355667799999999999999999999999 88888888
Q ss_pred Eeec
Q psy12061 486 ERTY 489 (626)
Q Consensus 486 ~~t~ 489 (626)
++|.
T Consensus 286 ~~T~ 289 (290)
T 3l5i_A 286 FTTP 289 (290)
T ss_dssp EECC
T ss_pred eecC
Confidence 8875
No 25
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.96 E-value=2.8e-28 Score=235.96 Aligned_cols=310 Identities=12% Similarity=0.131 Sum_probs=167.7
Q ss_pred cCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCC-cCeEEEEEeeCCC-CCcccCcceEEEEEEec
Q psy12061 253 VPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK-IGDLSISWEPLPR-EKQNAPNIYYKIFWRKK 330 (626)
Q Consensus 253 ~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~-~~~v~l~W~~~~~-~~~~~~~~~y~i~~~~~ 330 (626)
.-...|.+.+.+.|..|.+..... ..++.||.++.+...+ .+++.|+|+++.. +..++.+..|+|+|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~ 76 (380)
T 3lb6_C 5 CLAVGCLYTFLISTTFGCTSSSDT--------EIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNI 76 (380)
T ss_dssp ----------------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEET
T ss_pred EEehhhhhhheeecccccccCCcc--------cccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCC
Confidence 345677888888998885522221 2234789999998765 6899999999554 23456789999999998
Q ss_pred CCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecC----CCCCCCCccEEEEc---cCCCCCCCCCceEEEeee
Q psy12061 331 NDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIND----VGPGPESEVVTIFS---AEDMPQVAPQGVFSRGFN 403 (626)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~----~g~~~~s~~~~~~t---~~~~p~~~p~~~~~~~~~ 403 (626)
+.+.|+..... + ...... +..+..|.|||+|.|. .|.|.+|......+ .++.|+.+|.++++...+
T Consensus 77 ~~~~w~~~~~~---~--~~~~~~--~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~ 149 (380)
T 3lb6_C 77 GSETWKTIITK---N--LHYKDG--FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYN 149 (380)
T ss_dssp TCSSCEEEEES---S--SEEEEE--CCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEET
T ss_pred CCCcceEEEec---c--EEEEEe--ecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECC
Confidence 87788876543 1 122223 3448999999999976 67777776554443 567888899999999999
Q ss_pred cceEEEEeeeccccccccceeeEEEEEEEEecCCCccce--EEEEecCccceEEEe--CCccCceEEEEEEEeeCCCCCC
Q psy12061 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA--VYYLSRTTRNWALIV--GLQPDTKYYVKVMAYNNAGEGP 479 (626)
Q Consensus 404 ~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~~~~i~--~L~p~t~Y~v~V~a~~~~g~s~ 479 (626)
.+.+.++|+++... +...+|.|+|+..+...... ......+......+. ++.+++.|.|+|.|.|..|.++
T Consensus 150 ~~~l~csW~p~~~~-----~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~ 224 (380)
T 3lb6_C 150 WQYLLCSWKPGIGV-----LLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIR 224 (380)
T ss_dssp TTEEEEEEECC-----------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CC
T ss_pred CcEEEEEEcCCCCC-----CCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeec
Confidence 99999999987643 34678999998765432211 111121222234444 5688899999999999888655
Q ss_pred CCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCC-CCceeeEEEEEEEeccCCccccceeeecCccceEEe
Q psy12061 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFE-EEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADI 558 (626)
Q Consensus 480 ~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~-~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 558 (626)
. ....+.+.+.+++.||.++++...+.+++.|+|++ |... .+.+.+|+|+|+..+..+ ..... . .++.+
T Consensus 225 s-~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~--P~~~~~~~~l~Yev~y~~~~~~w----~~~~~-~--~~~~l 294 (380)
T 3lb6_C 225 S-SYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSI--PLGPIPARCFDYEIEIREDDTTL----VTATV-E--NETYT 294 (380)
T ss_dssp C-EEEEECGGGSCCCCCCEEEEEC-------CEEEEC--CSSSCCSTTEEEEECC------------CCEE-S--SSCC-
T ss_pred c-ccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECC--CCCCCCcceEEEEEEEEeCCCCc----eEecc-c--ceEEE
Confidence 3 34567777777778999999987788899999995 4333 357789999998753321 11111 1 25778
Q ss_pred cC-CCCCceEEEEEEEEec-----CC-CCCCCCCcEEEeecc
Q psy12061 559 VD-LSPGKRYHMRVLAFSN-----GG-DGRMSSPAITFQMGE 593 (626)
Q Consensus 559 ~~-L~p~~~Y~~~V~a~~~-----~G-~g~~s~~~~~~~~~~ 593 (626)
.+ |+|++.|.|+|+|... .| .|+||++ +.|.+.+
T Consensus 295 ~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~-~~~~t~~ 335 (380)
T 3lb6_C 295 LKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDK-QCWEGED 335 (380)
T ss_dssp -----------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred eCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCC-EEEeCCC
Confidence 88 9999999999999954 23 2566654 4566654
No 26
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.96 E-value=4.9e-28 Score=227.71 Aligned_cols=249 Identities=21% Similarity=0.342 Sum_probs=186.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc---CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.+.|.|+|+|..+..+.++.+.. +++|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 17 ~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~ 96 (284)
T 2rik_A 17 LALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ 96 (284)
T ss_dssp EETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEcc
Confidence 5689999999999999999999999999998777666542 3479999999999999999999999998888999999
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE--ecCCeEEEeecCCCCCEe
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEITNASFADAGE 156 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~ 156 (626)
.+|.+...++....+..|++++|.|.+.+.|.+ .+.|++++..+..... .+.. .....|.|.+++.+|+|.
T Consensus 97 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~ 169 (284)
T 2rik_A 97 EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEI--KVLWYKDETEIQESSK-----FRMSFVESVAVLEMYNLSVEDSGD 169 (284)
T ss_dssp CCCEEEECCCSEEEEETTCCEEEEEEEESSSCC--EEEEEETTEECCCSSS-----EEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCCcccccCCCceEecCCceEEEEEEEeeeCCC--EEEEEECCEECcCCCc-----EEEEEcCCEEEEEECCCCcccCEE
Confidence 999888777777889999999999999998776 5699999999875421 1222 234679999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCCCCCCceE-EEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~-~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~ 235 (626)
|+|.|.|..|..+..+.|.|..+|....... ........+.|.|... +.+.. .+.|..++ ..+...
T Consensus 170 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~~--~v~W~~~~--------~~~~~~ 236 (284)
T 2rik_A 170 YTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQ---GTPPF--QVSWHKDK--------RELRSG 236 (284)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECB---SSSCC--EEEEEETT--------EEECBT
T ss_pred EEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEE---ecCCC--EEEEEECC--------EECcCC
Confidence 9999999999999999999998885432211 1223455678888743 22222 23332221 111000
Q ss_pred e---eeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 236 E---VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 236 ~---~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
. .........+.+.+ +...+.+.|+|.|.|..|..
T Consensus 237 ~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~ 274 (284)
T 2rik_A 237 KKYKIMSENFLTSIHILN-VDSADIGEYQCKASNDVGSY 274 (284)
T ss_dssp TTEEEEEETTEEEEEECS-CCGGGCEEEEEEEEETTEEE
T ss_pred CCEEEEEcCCEEEEEEcC-CCcccCEEEEEEEEeCCCce
Confidence 0 00001122455555 88999999999999999854
No 27
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.96 E-value=5.4e-27 Score=220.11 Aligned_cols=270 Identities=17% Similarity=0.186 Sum_probs=198.4
Q ss_pred EEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecC-CCCceEeecceeeeeeeccCCceeEEEEee
Q psy12061 173 TVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENV 251 (626)
Q Consensus 173 ~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (626)
.+....+|.+|.++.+...+.+++.|+|+++. ..+.+|.|+++... ...|...... .....+.+.+
T Consensus 8 ~~~~~~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~i~~- 74 (283)
T 1tdq_A 8 GGGGIPVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGKTTFRLQ---------PPLSQYSVQA- 74 (283)
T ss_dssp ----CCSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCCEEEEEC---------TTCSEEEECS-
T ss_pred ccccccCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCcEEEEeC---------CCCCEEEecC-
Confidence 34456789999999999999999999999876 46889999997643 3344222110 2334556655
Q ss_pred ccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC
Q psy12061 252 LVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN 331 (626)
Q Consensus 252 l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~ 331 (626)
|.+++.|.|+|+|.|..|.+.+... .+.+ ++.+|.++.+...+.+++.|+|+++. +.+.+|.|+|+..+
T Consensus 75 L~p~t~Y~~~V~a~~~~g~s~~~~~--~~~t----~p~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~ 143 (283)
T 1tdq_A 75 LRPGSRYEVSISAVRGTNESDASST--QFTT----EIDAPKNLRVGSRTATSLDLEWDNSE-----AEAQEYKVVYSTLA 143 (283)
T ss_dssp CCTTCEEEEEEEEEETTEECCCEEE--EEEC----CCCCCEEEEEEEECSSCEEEEEECCS-----SCCSEEEEEEEETT
T ss_pred CCCCCEEEEEEEEECCCCCCCCeeE--EEEC----CCCCCCceEEEecCCCeEEEEecCCC-----CCccEEEEEEEeCC
Confidence 9999999999999999887643221 2222 34678899998888999999999832 56899999999877
Q ss_pred CCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEe
Q psy12061 332 DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTW 411 (626)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W 411 (626)
...+........ ......+.+.+|.|++.|.|+|+|.|..|.+.... ....+ .|+ +|.++.+...+.+++.|+|
T Consensus 144 ~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~-~~~~t---~~~-~P~~l~~~~~~~~sv~l~W 217 (283)
T 1tdq_A 144 GEQYHEVLVPKG-IGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPAT-MNART---ELD-SPRDLMVTASSETSISLIW 217 (283)
T ss_dssp CCCCEEEEEECC-SSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCC-CCEEEEEEEECSSCEEEEE
T ss_pred CCcceEEECCCC-CcccceEEEecCCCCCEEEEEEEEEeCCCCCcceE-EEecC---CCC-CCCccEEeEecCCEEEEEE
Confidence 655543333210 01156788999999999999999999988765432 22222 233 7789999999999999999
Q ss_pred eeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCc
Q psy12061 412 NPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482 (626)
Q Consensus 412 ~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~ 482 (626)
+++. +.+.+|.|+|+..+... ...........+.+.+|+|++.|.|+|+|.|..|.|+.+.
T Consensus 218 ~~p~-------~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~~ 278 (283)
T 1tdq_A 218 TKAS-------GPIDHYRITFTPSSGIS---SEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQQSLEST 278 (283)
T ss_dssp ECCC-------SCCSEEEEEEECSSSCC---EEEEEESSCSEEEECCCCTTCCEEEEEEEEETTEECCCEE
T ss_pred eCCC-------CcccEEEEEEEcCCCCe---eEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCCCCccee
Confidence 9864 55889999998765432 2223345567799999999999999999999999887654
No 28
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=3.7e-25 Score=233.23 Aligned_cols=505 Identities=13% Similarity=0.160 Sum_probs=293.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC-------------------CCcEEEccCCcEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-------------------GGRRKIFENGNLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~-------------------~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a 62 (626)
|.+|++++|.|...+.+.+.|.|+|+...... .+|..+..+++|.|.+++.+|+|.|+|.+
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v~~~D~G~Y~C~~ 90 (642)
T 1e07_A 11 VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDTGFYTLHV 90 (642)
T ss_pred ccccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccCCcEEECCCCcccCcEEEEEE
Confidence 67999999999987777789999995432110 24666677889999999999999999999
Q ss_pred EcCC-CCceeeEEEEEEeCC--ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe
Q psy12061 63 TNVH-GMDESKGRLIVLHGP--SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 139 (626)
Q Consensus 63 ~n~~-g~~~~~~~l~v~~~p--~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 139 (626)
.+.. +.....+.|.|...+ +.+.. +....+..|+.++|.|.+.+ |. ..+.|+++|..+.... ...+..
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~--~~v~W~~~g~~l~~~~-----~~~~~~ 161 (642)
T 1e07_A 91 IKSDLVNEEATGQFRVYPELPKPSISS-NNSKPVEDKDAVAFTCEPET-QD--ATYLWWVNNQSLPVSP-----RLQLSN 161 (642)
T ss_pred EcCCCeEEEEEEEEEecccCCCCcEEc-cCceeEecCCcEEEEEECCC-CC--eeEEEEECCeECCCCC-----ceEEcC
Confidence 9864 444566778886632 22222 33467889999999999998 54 4679999999986542 112223
Q ss_pred cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCCCce--EEEEEeccceEEEEecCCCCCCcccEEEEE
Q psy12061 140 DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPGGV--QVVEVHKTSATIQWTDGATNGRPITHYKII 216 (626)
Q Consensus 140 ~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p~~~--~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~ 216 (626)
.++.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|..|... .........+.|.|... +.+... +
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~---g~p~~~--i- 235 (642)
T 1e07_A 162 GNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAA---SNPPAQ--Y- 235 (642)
T ss_pred CCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcC---CCCCcE--E-
Confidence 46799999999999999999999988864 566888888766544211 01123456777888752 222222 2
Q ss_pred EeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCc-ccCCCCCCCCCCceeE
Q psy12061 217 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQ-YNTPADKPYQAPSRIG 295 (626)
Q Consensus 217 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~-~~~~~~~p~~~p~~~~ 295 (626)
.|.+.+..+ .....+.+.+ +...+.+.|+|.|.|..|....+..... +...+..|...+....
T Consensus 236 -------~W~~~g~~i--------~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~ 299 (642)
T 1e07_A 236 -------SWFVNGTFQ--------QSTQELFIPN-ITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSN 299 (642)
T ss_pred -------EEEECCeEc--------ccCCceEEec-ccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCCce
Confidence 233322221 1122456655 8999999999999999875433222111 1111111100011111
Q ss_pred eecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCC
Q psy12061 296 GGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPG 375 (626)
Q Consensus 296 ~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~ 375 (626)
... ....+.|.+.... . + ..+.|...+..--........ .....+.+.++.......|+|.|.|..|..
T Consensus 300 ~~~-~g~~v~l~C~~~~----~-p---~~v~W~~~g~~l~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 368 (642)
T 1e07_A 300 PVE-DEDAVALTCEPEI----Q-N---TTYLWWVNNQSLPVSPRLQLS--NDNRTLTLLSVTRNDVGPYECGIQNELSVD 368 (642)
T ss_pred eEe-cCCcEEEEEECCC----C-C---ccEEEEECCccCCCcCCEEEe--CCCCEEEEeccCcccCeeEEEEEeCCCCCc
Confidence 111 1245788887621 1 1 256676665211000011110 112356777888888889999999998864
Q ss_pred CCCcc--EEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccce
Q psy12061 376 PESEV--VTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453 (626)
Q Consensus 376 ~~s~~--~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 453 (626)
. +.. +.+...+..+...|....+ .....+.|.......+. -.+.|...+... .....
T Consensus 369 ~-s~~~~l~V~~~p~~~~~~~~~~~~--~~g~~~~l~C~~~g~p~---------~~i~W~~~g~~~---------~~~~~ 427 (642)
T 1e07_A 369 H-SDPVILNVLYGPDDPTISPSYTYY--RPGVNLSLSCHAASNPP---------AQYSWLIDGNIQ---------QHTQE 427 (642)
T ss_pred c-eeeEEEEEEcCCCCCeecCCceEe--cCCCcEEEEEEcCccCC---------CeEEEEECCEEc---------CCCce
Confidence 3 322 2333222222212222222 23445555554422110 134443332111 11234
Q ss_pred EEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEE----EeeeCCCEEEEEEeecCCCCCCCceeeE
Q psy12061 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH----IKGINPTTVHVTWRYVSPSFEEEPIIGY 529 (626)
Q Consensus 454 ~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~----~~~~~~~~~~l~W~~~~~~~~~~~i~~Y 529 (626)
+.|.++.+.....++..|.|..|....+..+.+...... .+| .+. ........+.|.+.. . ++ .-
T Consensus 428 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~--~~p-~i~~~~~~~v~~g~~v~l~C~~--~----~~--~~ 496 (642)
T 1e07_A 428 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAEL--PKP-SISSNNSKPVEDKDAVAFTCEP--E----AQ--NT 496 (642)
T ss_pred EEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccC--CCc-eEecCCceeecCCCeEEEEEEC--C----CC--Cc
Confidence 788888888888888999999887655544444333211 122 111 122245678888882 2 11 12
Q ss_pred EEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCC
Q psy12061 530 KVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGR 581 (626)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~ 581 (626)
.+.|+..+..... ............+.|.++.......|+..|.|..|...
T Consensus 497 ~i~W~~~g~~l~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 547 (642)
T 1e07_A 497 TYLWWVNGQSLPV-SPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANR 547 (642)
T ss_pred EEEEEECCEeCCC-CCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCcc
Confidence 3444443332211 11222222345788888888888888999999988543
No 29
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=228.14 Aligned_cols=286 Identities=15% Similarity=0.110 Sum_probs=186.1
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a 368 (626)
.+|.++.+... ...+.|+|+++ .+.++.+. |.|+|+..+...|...............++...|.+++.|.|||+|
T Consensus 5 ~~P~nv~~~~~-n~~~iL~W~pp--~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A 80 (306)
T 3s98_A 5 KSPQKVEVDII-DDNFILRWNRS--DESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 80 (306)
T ss_dssp ---CCCEEEEE-TTEEEEECC----------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred CCCcEeEEEEE-CCeEEEEEcCC--CCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence 47888888765 45688999983 34445565 9999999877788754222111222333444457899999999999
Q ss_pred ecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecccccc--ccceeeEEEEEEEEecCCCccceEEEE
Q psy12061 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRE--NIRGRLIGHRIKYWKEDNPEETAVYYL 446 (626)
Q Consensus 369 ~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~ 446 (626)
.| .|.|.++....+.+....+.++|. +.+.... ++|.|+|+|+...+. ..+|.+.+|.|.||+.+...... .
T Consensus 81 ~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~--~- 154 (306)
T 3s98_A 81 EK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEER--I- 154 (306)
T ss_dssp EC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC---CCCC-----CCEEEEEEEETTTCCCEE--E-
T ss_pred Ee-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCCCCCcceeccCCcEEEEEEEEECCCCCeEE--E-
Confidence 99 888877766666665555555674 7776544 689999996543211 01478999999999887654322 1
Q ss_pred ecCccceEEEeCCccCceEEEEEEEee--CCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCC
Q psy12061 447 SRTTRNWALIVGLQPDTKYYVKVMAYN--NAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEE 524 (626)
Q Consensus 447 ~~~~~~~~~i~~L~p~t~Y~v~V~a~~--~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~ 524 (626)
......+.|.+|+|++.|.|+|+|.+ ..|.|++|..+.+.|..+.|+.+|.++.+...+ +++.|+|++ +....
T Consensus 155 -~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~~-~s~~l~W~~--p~~~~- 229 (306)
T 3s98_A 155 -ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDY--TYANM- 229 (306)
T ss_dssp -EEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEEC--SSSSC-
T ss_pred -ecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEec-CEEEEEeCC--CCCcE-
Confidence 12345699999999999999999999 678999999999999988888899999987655 789999994 43222
Q ss_pred ceeeEEEEEEEec-----cCCccccce--eeecCccceEEecC-CCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 525 PIIGYKVRVWEVD-----QDMSRANDT--IIPVGNTLDADIVD-LSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 525 ~i~~Y~i~~~~~~-----~~~~~~~~~--~~~~~~~~~~~l~~-L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+|.+.|...- ......+.. .......+.+.+.+ |.+...|.|||+|.|..|.|.+|+. ..|.++.
T Consensus 230 ---~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~-~~~~~~~ 302 (306)
T 3s98_A 230 ---TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE-IKFDTEI 302 (306)
T ss_dssp ---EEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCC-EEEEC--
T ss_pred ---EEEEEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCCCccccccc-cccCccc
Confidence 4555544210 100111111 11233556777777 3455599999999999999999964 5677653
No 30
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.96 E-value=6.5e-27 Score=220.23 Aligned_cols=264 Identities=20% Similarity=0.249 Sum_probs=198.5
Q ss_pred CCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecC-CCCceEeecceeeeeeeccCCceeEEEEeeccCCc
Q psy12061 178 GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256 (626)
Q Consensus 178 ~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 256 (626)
.+|.+|.++.+...+.+++.|+|+++. ..+.+|.|+++..+ ...|...... .....+.+.+ |.+++
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~~~~~~~~---------~~~~~~~i~~-L~p~t 85 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTGPMKEINLA---------PDSSSVVVSG-LMVAT 85 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEESSSSSCCEEEEEC---------TTCCEEEECS-CCSSC
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCC---CCeeEEEEEEEeCCCCCceEEEEcC---------CCccEEEeCC-CCCCC
Confidence 467889999999999999999999873 36889999998765 3455443221 2233555655 99999
Q ss_pred eEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcce
Q psy12061 257 TYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336 (626)
Q Consensus 257 ~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~ 336 (626)
.|.|+|+|.|..|.+.++.. .+.+...+ .+|.++.+...+.+++.|+|+++ ++.+.+|.|+|+..+...+.
T Consensus 86 ~Y~~~V~a~~~~g~s~~s~~--~~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~~ 156 (290)
T 3r8q_A 86 KYEVSVYALKDTLTSRPAQG--VVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQVDAVPANGQTPI 156 (290)
T ss_dssp EEEEEEEEEETTEECCCEEE--EEECCCCC--CCCEEEEEEEECSSCEEEEEECC-----SCCCCEEEEEEEESSSCCCE
T ss_pred EEEEEEEEEeCCCCCCCcce--eEecCCCC--CCCceeEEEEcCCCeEEEEEeCC-----CCcccEEEEEEEECCCCcce
Confidence 99999999999998876642 34444333 57889999888899999999983 35689999999987644333
Q ss_pred eeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccc
Q psy12061 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416 (626)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~ 416 (626)
.... ......+.+.+|.|++.|.|+|+|.|..|.+.+. .....+ .|. +|.++.+...+.+++.|+|++|.
T Consensus 157 ~~~~----~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t---~p~-~P~~l~~~~~~~~sv~l~W~~p~- 226 (290)
T 3r8q_A 157 QRTI----KPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV-VIDAST---AID-APSNLRFLATTPNSLLVSWQPPR- 226 (290)
T ss_dssp EEEE----CTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEEC---CCC-CCEEEEEEEEETTEEEEEEECCS-
T ss_pred EEec----CCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecC---CCC-CCCccEEEeeCCCEEEEEEeCCC-
Confidence 2222 1234467899999999999999999999887643 233333 244 78899999899999999999876
Q ss_pred cccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCC
Q psy12061 417 IRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE 480 (626)
Q Consensus 417 ~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~ 480 (626)
+.+.+|.|+|+..+...... ..........+.+.+|+|++.|.|+|+|.+..|.|++
T Consensus 227 ------~~~~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p 283 (290)
T 3r8q_A 227 ------ARITGYIIKYEKPGSPPREV-VPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSEP 283 (290)
T ss_dssp ------SCCCEEEEEEECTTSCCEEC-SSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred ------CcccEEEEEEEeCCCCccee-EeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCCc
Confidence 35889999998765543211 1122345567999999999999999999999998764
No 31
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=6.1e-26 Score=246.10 Aligned_cols=520 Identities=16% Similarity=0.118 Sum_probs=292.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEE------ccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNI------IGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~------i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 75 (626)
+.+|++++|.|.+.|.|.|.|.|+|++.. +....+... .+++|.|.+++.+|+|.|+|.|.|..|.....+.|
T Consensus 260 v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 338 (816)
T 3dmk_A 260 YSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQ-VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVL 338 (816)
T ss_dssp ECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEE-ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEe-ccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEE
Confidence 46899999999999999999999995432 223344433 46789999999999999999999999988888888
Q ss_pred EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 76 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 76 ~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
.|..+|.+.. .|....+.+|++++|.|.+.+.|.+ .+.|+|||..+.. ..+.|.|.+++.+|+|
T Consensus 339 ~V~~~~~~~~-~~~~~~v~~G~~v~l~C~~~g~p~~--~v~W~k~g~~~~~-------------~~~~L~i~~v~~~d~G 402 (816)
T 3dmk_A 339 TVTAPLSAKI-DPPTQTVDFGRPAVFTCQYTGNPIK--TVSWMKDGKAIGH-------------SESVLRIESVKKEDKG 402 (816)
T ss_dssp EECEEEEEEE-ESSEEECCTTSCEEEEEEEEEECCC--EEEEEETTEECSC-------------CSSEEEESSCCGGGCE
T ss_pred EEcCCCceee-CCCceEecCCCCEEEEEEEeccCCC--EEEEEECCEECCC-------------CCCEEEEcCCCHHHCE
Confidence 8876665544 4678889999999999999999876 5689999998854 2457999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCCCCCCceE----EEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecc
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ----VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEH 231 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~----~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~ 231 (626)
.|+|.|.|..|.....+.|.+.....+|.... ........+.|.|.... .+.. .+.|..++..- .....
T Consensus 403 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g---~p~p--~v~W~~~g~~l--~~~~~ 475 (816)
T 3dmk_A 403 MYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGG---NPTP--EISWELDGKKI--ANNDR 475 (816)
T ss_dssp EEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEEC---SSCC--EEEEEETTEEC--CSCTT
T ss_pred EEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEec---CCCC--EEEEEECCEEC--CCCCC
Confidence 99999999999888888888865444442111 11223445666665321 1111 12222211100 00000
Q ss_pred eeeeeeeccCCc--eeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEe
Q psy12061 232 VIGKEVDRYTGR--KEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309 (626)
Q Consensus 232 ~~~~~~~~~~~~--~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~ 309 (626)
..........+. ..+.+.+ +...+.+.|+|.|.|..|....+... .+...+.. ..+....+.. ...+.|.+.
T Consensus 476 ~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~~--~~~~~~~v~~--G~~v~l~C~ 549 (816)
T 3dmk_A 476 YQVGQYVTVNGDVVSYLNITS-VHANDGGLYKCIAKSKVGVAEHSAKL-NVYGLPYI--RQMEKKAIVA--GETLIVTCP 549 (816)
T ss_dssp EEEEEEECTTSCEEEEEEESS-CCTTTCEEEEEEEEETTEEEEEEEEE-EECSSCEE--CCCCCEEEET--TCCEEEECC
T ss_pred cccccEEecCCCcEEEEEEee-ccccCCEEEEEEEEECCCeEEEEEEE-EEecCCee--EccCCeEEec--CCeEEEEEE
Confidence 000000000111 1344544 88999999999999998865332221 11111111 1222233332 356777776
Q ss_pred eCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCc-ceeEEEEEEEEecCCCCCCC-CccEEEEccC
Q psy12061 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF-YYTEYEVKVQAINDVGPGPE-SEVVTIFSAE 387 (626)
Q Consensus 310 ~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-p~~~Y~~~v~a~n~~g~~~~-s~~~~~~t~~ 387 (626)
.. . .+ .-.+.|.+.+............ ....+.+.++. ......|+|.|.|..|.... +..+.+...+
T Consensus 550 ~~--g---~p--~~~i~W~k~~~~l~~~~~~~~~---~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p 619 (816)
T 3dmk_A 550 VA--G---YP--IDSIVWERDNRALPINRKQKVF---PNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLP 619 (816)
T ss_dssp EE--C---SS--EEEEEEEETTEESCCSTTEEEC---TTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCC
T ss_pred ec--C---CC--CCEEEEEECCeEcccCCceEEe---cCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCC
Confidence 51 1 11 1267777665111000000001 11246677775 46677889999999885431 1112222222
Q ss_pred CCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc---ceEEEEecCccceEEEeCCccCce
Q psy12061 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE---TAVYYLSRTTRNWALIVGLQPDTK 464 (626)
Q Consensus 388 ~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~ 464 (626)
......+.... ......+.|.+....... ...+.|...+.... .............+.|.++.....
T Consensus 620 ~~~~~~~~~~~--~~~G~~v~L~C~~~~~~~--------~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 689 (816)
T 3dmk_A 620 RIIPFAFEEGP--AQVGQYLTLHCSVPGGDL--------PLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHA 689 (816)
T ss_dssp CCBCCCCCSSC--EESSCEEEEEEBCCCSSS--------CCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGC
T ss_pred ccccccccccc--cCCCCeEEEEEEEeCCCC--------CCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhC
Confidence 11111112222 234567778876542111 12344444332211 111112223334588999999888
Q ss_pred EEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccc-
Q psy12061 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA- 543 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~- 543 (626)
..++..|.|..|....+..+.+...+... ..|.+..+ .....+.|.-.. ... +. -.|.|...+......
T Consensus 690 G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~-~~~~~~~v--~~G~~v~l~C~~--~g~---P~--p~i~W~k~~~~~~~~~ 759 (816)
T 3dmk_A 690 GNFTCHARNLAGHQQFTTPLNVYVPPRWI-LEPTDKAF--AQGSDAKVECKA--DGF---PK--PQVTWKKAVGDTPGEY 759 (816)
T ss_dssp EEEEEEEECSSCEEEEEEEECEEEEEEEE-ECCCCEEE--ETTCCEEEECEE--EEE---SC--CEEECCEECSSSTTCC
T ss_pred EEEEEEEEeCCccEEEEEEEEEEeCCcee-eeccccee--cCCCcEEEEEEE--ecC---CC--CeEEEEecCCCCCccc
Confidence 89999999988865433333332221111 12223222 223344444331 000 00 023333322211000
Q ss_pred -----cceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 544 -----NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 544 -----~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
...... ......|.++.+...=.++..|.|..|.+..+
T Consensus 760 ~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 802 (816)
T 3dmk_A 760 KDLKKSDNIRV--EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSA 802 (816)
T ss_dssp BCCCCBTTEEE--ETTEEEECSCCGGGCEEEEEEEECSSSSCEEE
T ss_pred cccccCCCEEe--cCCEEEECcCChhhCeEEEEEEEeCCCCCcEE
Confidence 001111 22357888888888888889999999987633
No 32
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.96 E-value=3.8e-27 Score=255.55 Aligned_cols=431 Identities=18% Similarity=0.182 Sum_probs=257.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe--
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~-- 79 (626)
+.+|++++|.|.+.|.|.|.|.|+|||..+... ++.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 355 v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~ 427 (816)
T 3dmk_A 355 VDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS-------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRF 427 (816)
T ss_dssp CCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSS
T ss_pred ecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-------CCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEcccc
Confidence 578999999999999999999999999998643 45699999999999999999999999888888887742
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC----CeEEEeecCCCCCE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG----GLLEITNASFADAG 155 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~~~~~~d~g 155 (626)
.|+.+...+....+.+|++++|.|.+.+.|.| .+.|+++|..+........ ......+ ..|.|.+++.+|+|
T Consensus 428 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p--~v~W~~~g~~l~~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G 503 (816)
T 3dmk_A 428 DPPVIRQAFQEETMEPGPSVFLKCVAGGNPTP--EISWELDGKKIANNDRYQV--GQYVTVNGDVVSYLNITSVHANDGG 503 (816)
T ss_dssp CCCEEEEECCCEEECSSSCEEEEEEEECSSCC--EEEEEETTEECCSCTTEEE--EEEECTTSCEEEEEEESSCCTTTCE
T ss_pred CCCceEecCcceEEcCCCCEEEEEEEecCCCC--EEEEEECCEECCCCCCccc--ccEEecCCCcEEEEEEeeccccCCE
Confidence 34444445677889999999999999999887 5699999999865421000 0000111 36999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~ 235 (626)
.|+|.|.|..|..+..+.|.|..+|...............+.|.|... +.+.. .+.|..+ +..+...
T Consensus 504 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~---g~p~~--~i~W~k~--------~~~l~~~ 570 (816)
T 3dmk_A 504 LYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVA---GYPID--SIVWERD--------NRALPIN 570 (816)
T ss_dssp EEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEE---CSSEE--EEEEEET--------TEESCCS
T ss_pred EEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEec---CCCCC--EEEEEEC--------CeEcccC
Confidence 999999999999999999999988743222222334566777777642 12222 2333322 2211111
Q ss_pred eeeccCCceeEEEEeecc-CCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCC
Q psy12061 236 EVDRYTGRKEASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPRE 314 (626)
Q Consensus 236 ~~~~~~~~~~~~i~~~l~-~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~ 314 (626)
..........+.+.+ +. ..+.+.|+|.|.|..|..........+...+......+....+. ....+.|.+....
T Consensus 571 ~~~~~~~~~~l~i~~-v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~--~G~~v~L~C~~~~-- 645 (816)
T 3dmk_A 571 RKQKVFPNGTLIIEN-VERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQ--VGQYLTLHCSVPG-- 645 (816)
T ss_dssp TTEEECTTSEEEESS-CCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEE--SSCEEEEEEBCCC--
T ss_pred CceEEecCCeEEEEe-cCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccC--CCCeEEEEEEEeC--
Confidence 111111223455555 65 58899999999999885422111111112221111111222222 2467888887521
Q ss_pred CcccCcceEEEEEEecCCCcce--eeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCC
Q psy12061 315 KQNAPNIYYKIFWRKKNDTEFQ--SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQV 392 (626)
Q Consensus 315 ~~~~~~~~y~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~ 392 (626)
+.+. ..+.|...+..... ...... .......+.+.++.......|+|.|.|..|....+..+.+...+..-.
T Consensus 646 --~~~~--~~i~W~~~g~~l~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~- 719 (816)
T 3dmk_A 646 --GDLP--LNIDWTLDGQAISEDLGITTSR-VGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWIL- 719 (816)
T ss_dssp --SSSC--CEEEEEETTBCCCGGGTCEEEE-ETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEE-
T ss_pred --CCCC--CEEEEEECCeEcCCCCCeeEEE-cCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceee-
Confidence 1111 25667766521100 000010 111335677888888889999999999988765444443332211111
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc--------ceEEEEecCccceEEEeCCccCce
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE--------TAVYYLSRTTRNWALIVGLQPDTK 464 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~L~p~t~ 464 (626)
.|....+ .....+.|.-.....+. -.|.|...+.... ...... ....+.|.++.....
T Consensus 720 ~~~~~~v--~~G~~v~l~C~~~g~P~---------p~i~W~k~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~ 785 (816)
T 3dmk_A 720 EPTDKAF--AQGSDAKVECKADGFPK---------PQVTWKKAVGDTPGEYKDLKKSDNIRV---EEGTLHVDNIQKTNE 785 (816)
T ss_dssp CCCCEEE--ETTCCEEEECEEEEESC---------CEEECCEECSSSTTCCBCCCCBTTEEE---ETTEEEECSCCGGGC
T ss_pred eccccee--cCCCcEEEEEEEecCCC---------CeEEEEecCCCCCccccccccCCCEEe---cCCEEEECcCChhhC
Confidence 2222222 12333444333211000 0233322211100 000011 122477888888777
Q ss_pred EEEEEEEeeCCCCCCCC
Q psy12061 465 YYVKVMAYNNAGEGPES 481 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s 481 (626)
-.++..|.|..|....+
T Consensus 786 G~Y~C~a~N~~G~~~~~ 802 (816)
T 3dmk_A 786 GYYLCEAINGIGSGLSA 802 (816)
T ss_dssp EEEEEEEECSSSSCEEE
T ss_pred eEEEEEEEeCCCCCcEE
Confidence 77788899999875433
No 33
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.96 E-value=5.3e-27 Score=209.29 Aligned_cols=200 Identities=23% Similarity=0.304 Sum_probs=160.7
Q ss_pred CCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEE
Q psy12061 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467 (626)
Q Consensus 388 ~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v 467 (626)
++|+.+|.++++...+.+++.|+|++|.......++.+.+|.|+|+..+........ .......+.+.+|+|++.|.|
T Consensus 2 d~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~i~~L~p~t~Y~~ 79 (211)
T 3p4l_A 2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN--ANATTLSYLVTGLKPNTLYEF 79 (211)
T ss_dssp -CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE--EEESSSEEEECSCCTTCEEEE
T ss_pred CCCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE--eCCCceEEEecCcCCCCEEEE
Confidence 467779999999999999999999998654333347799999999876654333222 234556799999999999999
Q ss_pred EEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeC--CCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccc
Q psy12061 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN--PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~--~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~ 545 (626)
+|+|.|..|.|++|..+.++|.+..|+.+|.++++...+ .+++.|+|+ +|...+|.|.+|.|+|+..+........
T Consensus 80 ~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~~~~~ 157 (211)
T 3p4l_A 80 SVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQ--PPSEANGKITGYIIYYSTDVNAEIHDWV 157 (211)
T ss_dssp EEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEE--CCTTCCSCCCEEEEEEESCTTSCGGGSE
T ss_pred EEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEEC--CCCCCCCCEEEEEEEEEECCCCCCCceE
Confidence 999999999999999999999999888799999988874 789999999 5677889999999998765544322223
Q ss_pred eeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 546 ~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
......+.+.+.|.+|.|++.|.|+|+|+|..|.|++|+++ .+.+.
T Consensus 158 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v-~~~~~ 203 (211)
T 3p4l_A 158 IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAV-QFRTP 203 (211)
T ss_dssp EEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCE-EEECC
T ss_pred EEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE-EccCc
Confidence 34456788999999999999999999999999999999765 45554
No 34
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.96 E-value=5.8e-27 Score=223.56 Aligned_cols=274 Identities=14% Similarity=0.161 Sum_probs=194.8
Q ss_pred eCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCC
Q psy12061 86 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTV 165 (626)
Q Consensus 86 ~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~ 165 (626)
.++..+.+..|++++|.|.+.+.+. ...|.|++++..+... ..+....++.|.|.+++..|+|.|+|. ..
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~-~~~i~W~~~~~~~~~~------~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~ 80 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPED-NATVHWVLRKPAAGSH------PSRWAGMGRRLLLRSVQLHDSGNYSCY---RA 80 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTC-CSEEEEEEECSSSSCC------CEEEEEESSEEEECSCCGGGCEEEEEE---SS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCC-CceEEEEECCccCCcc------ccccccccceEEecccchhhCeEeEEE---eC
Confidence 3455566689999999999987652 2467999988765221 134445678999999999999999999 37
Q ss_pred CceEEEEEEEEeCCCCCCCceEEEE-EeccceEEEEecCCCCCCcccEEEEEEeec-CC--CCc-eEeecceeeeeeecc
Q psy12061 166 GKISTKTTVIVEGPPGLPGGVQVVE-VHKTSATIQWTDGATNGRPITHYKIIARTN-WN--STW-FNVSEHVIGKEVDRY 240 (626)
Q Consensus 166 g~~~~~~~l~v~~~P~~p~~~~~~~-~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~-~~--~~w-~~~~~~~~~~~~~~~ 240 (626)
|.....+.|.|..+|..|. +.|.. ....++.+.|+++.+++ ....|.+.++.. +. ..| ..+.. ...
T Consensus 81 g~~~~~~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~-~~~~y~l~~~~~~~~~~~~~~~~c~~-------~~~ 151 (325)
T 1n26_A 81 GRPAGTVHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPS-LTTKAVLLVRKFQNSPAEDFQEPCQY-------SQE 151 (325)
T ss_dssp SSCSCEEEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCC-TTCEEEEEEEEESSSSCEEEEEEEEE-------ETT
T ss_pred CEEeeeEEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCC-CCceEEEEEEEccCCCCCcccccCCC-------CCC
Confidence 8888899999999999998 88763 33678999999876655 347899887754 21 122 11110 001
Q ss_pred CCceeEEEEeecc-CCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCC--cCeEEEEEeeCCCCCcc
Q psy12061 241 TGRKEASIENVLV-PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK--IGDLSISWEPLPREKQN 317 (626)
Q Consensus 241 ~~~~~~~i~~~l~-~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~--~~~v~l~W~~~~~~~~~ 317 (626)
.+...+.+.. +. +++.|.|+|.|.|..|.+.. ... .+......++.+|.++.+...+ .+++.|+|+++...+.+
T Consensus 152 ~~~~~c~i~~-~~~~~~~Y~f~v~A~N~~G~~~s-~~~-~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~ 228 (325)
T 1n26_A 152 SQKFSCQLAV-PEGDSSFYIVSMCVASSVGSKFS-KTQ-TFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSS 228 (325)
T ss_dssp TTEEEEEECC-CTTCCCEEEEEEEEEETTEEEEC-CCE-EEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCS
T ss_pred CCCEEEEECC-CcccCcEEEEEEEEEcCCCCccc-CcE-EEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCC
Confidence 2333455544 54 78999999999999997642 221 2233333445788899887654 36999999995443356
Q ss_pred cCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCC---ccEEEEc
Q psy12061 318 APNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPES---EVVTIFS 385 (626)
Q Consensus 318 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s---~~~~~~t 385 (626)
+.+.+|.|+|+..+...|...... .....+.+.+|.|++.|.|+|+|.|..|.|.|| ..+..++
T Consensus 229 ~~~~~Y~V~yr~~~~~~W~~~~~~----~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 229 FYRLRFELRYRAERSKTFTTWMVK----DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp SSCEEEEEEEEETTCSCCEEEECG----GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred cEeEEEEEEEEeCCCCCCEEEccc----CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 678999999999887788765432 123467899999999999999999988866555 4444443
No 35
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=1.5e-24 Score=226.07 Aligned_cols=451 Identities=16% Similarity=0.126 Sum_probs=257.1
Q ss_pred CCCCceEEEEeeeCCCCCC---eeEEEeCCEEcc--------------CCCcEEEcc---CC--cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIG--------------SGGRRKIFE---NG--NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~i~--------------~~~~~~~~~---~g--~L~i~~v~~~d~G~Y~ 59 (626)
+.+|++++|.|.+.+.|.| .|.|+|++..+. ..+|+.+.. +| +|.|.+++.+|+|.|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~ 91 (585)
T 2ocw_A 12 SVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYK 91 (585)
T ss_pred EecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEE
Confidence 6789999999999998754 899999885321 135666653 33 5999999999999999
Q ss_pred EEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecc----c-c-CCccC
Q psy12061 60 CTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN----M-D-LNELE 133 (626)
Q Consensus 60 C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~----~-~-~~~~~ 133 (626)
|.|.|..|.....+.|.|..+|.+.. .+....+.+|++++|.|.+.+.+++ ..+.|+|++..... . . .....
T Consensus 92 C~~~n~~~~~~~~~~l~V~~~p~~~~-~~~~~~v~~G~~v~l~C~~~~~~~~-~~v~W~k~~~~~~~~~~~~~~~~~~~~ 169 (585)
T 2ocw_A 92 CGLGINSRGLSFDVSLEVSQGPGLLN-DTKVYTVDLGRTVTINCPFKTENAQ-KRKSLYKQIGLYPVLVIDSSGYVNPNY 169 (585)
T ss_pred EEcccCCCCceEEEEEEEecCccccC-CCccEEEEcCCCEEEEEEecCCCCC-ccEEEEECCCCCceEEecCCcccCccc
Confidence 99999998888889999988887654 5788899999999999999976543 35699998764211 0 0 00000
Q ss_pred CCeeEe--cCC-----eEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCC
Q psy12061 134 TPNINI--DGG-----LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN 206 (626)
Q Consensus 134 ~~~~~~--~~~-----~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~ 206 (626)
..++.+ .+. .|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+| |..+. ......+.|.|.....
T Consensus 170 ~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~--p~~~~--~~~G~~v~l~C~~~~~- 244 (585)
T 2ocw_A 170 TGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE--PELVY--EDLRGSVTFHCALGPE- 244 (585)
T ss_pred cCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC--CceeE--EcCCCcEEEEEEcCCC-
Confidence 123322 222 79999999999999999999999999999999998754 32222 2345567777774211
Q ss_pred CCcccEEEEEEe-ecCCC---CceE-------eecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCC-
Q psy12061 207 GRPITHYKIIAR-TNWNS---TWFN-------VSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPS- 274 (626)
Q Consensus 207 ~~~~~~y~v~~~-~~~~~---~w~~-------~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s- 274 (626)
.+. .-.+.+. .++.. .... ......... ....+...+.+.+ +...+.+.|+|.|.|. |....+
T Consensus 245 -~~~-~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~L~i~~-v~~~d~G~Y~C~a~n~-g~~~~~~ 319 (585)
T 2ocw_A 245 -VAN-VAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNP-QDKDGSFSVVITG-LRKEDAGRYLCGAHSD-GQLQEGS 319 (585)
T ss_pred -CCC-ceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeec-cCCCcEEEEEEcc-CChhhCEEEEEEEEcC-CCccccC
Confidence 111 1122222 11110 0000 000000000 0001222566665 9999999999999995 333211
Q ss_pred --C-CCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEe--cCCC-cce------------
Q psy12061 275 --S-PSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK--KNDT-EFQ------------ 336 (626)
Q Consensus 275 --~-~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~--~~~~-~~~------------ 336 (626)
. ....+...+..+ ..|..+.+..+ ..+.|.+... . ...+...|.+.|.+ .+.. ...
T Consensus 320 ~~~~~~l~V~~~p~~~-~~~~~~~~~~G--~~v~l~C~~~--~-~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~ 393 (585)
T 2ocw_A 320 PIQAWQLFVNEESTIP-RSPTVVKGVAG--SSVAVLCPYN--R-KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEG 393 (585)
T ss_pred ceeeEEEEEecccccc-cCCcceEEEeC--CcEEEEEecC--C-CCCccEEEEEEEEccCCCCCceeeeecceeecccCC
Confidence 1 111122222222 23445554443 4466666541 1 11223345556665 3320 000
Q ss_pred eeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccc
Q psy12061 337 SETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIEL 416 (626)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~ 416 (626)
..............+.|.++.......|+|.| |..|....+..+.+...+.... .|..+. ......+.|.+.....
T Consensus 394 r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~-~~~~~~--v~~G~~v~L~C~~~~~ 469 (585)
T 2ocw_A 394 RLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLK-VPGNVT--AVLGETLKVPCHFPCK 469 (585)
T ss_pred CEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccc-cCCcee--EecCCcEEEEEEecCC
Confidence 00000000123345778888877777888888 8776543333333332111111 233333 3345667888865421
Q ss_pred cccccceeeEEEEEEEEecCCCccc-------eEEEEe--cCccceEEEeCCccCceEEEEEEEeeCCCCCC
Q psy12061 417 IRENIRGRLIGHRIKYWKEDNPEET-------AVYYLS--RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP 479 (626)
Q Consensus 417 ~~~~~~~~i~~Y~v~~~~~~~~~~~-------~~~~~~--~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~ 479 (626)
... .-.+.|.|...+..... ...... ......+.|.++.....-.++..|.|..|.+.
T Consensus 470 ~~~-----~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 470 FSS-----YEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred CCC-----CccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 100 11345666554422100 001111 12224578888888766677788889887644
No 36
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=6.3e-27 Score=229.75 Aligned_cols=340 Identities=19% Similarity=0.266 Sum_probs=202.3
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEccCCcEEEccC-CCCCCEEEEEEEEcCCCCce-eeEEEEEE
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPV-SRDDSGIYSCTATNVHGMDE-SKGRLIVL 78 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~~g~L~i~~v-~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 78 (626)
.+|+.++|.|.+.|.|.|+|.|+|||.+|... .++. ..+|+|.|.++ +.+|+|.|+|.|.|..|... ..+.|.|.
T Consensus 21 ~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~-~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~ 99 (384)
T 3kld_A 21 SEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYS-VVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFA 99 (384)
T ss_dssp CSCSEEEECCEEEEESCCEEEEEETTEECCC----CEE-EETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEE-EECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEe
Confidence 58999999999999999999999999999743 3444 35778888876 67899999999999999854 45788887
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCEeE
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEY 157 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y 157 (626)
..+.+...++....+.+|+.+.|.|.+.... +.+.+.|++++.++.... .+.. ..++.|.|.+++.+|+|.|
T Consensus 100 ~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~~------~~~~~~~~~~L~I~~v~~~D~G~Y 172 (384)
T 3kld_A 100 YLENFKTRTRSTVSVRRGQGMVLLCGPPPHS-GELSYAWIFNEYPSYQDN------RRFVSQETGNLYIAKVEKSDVGNY 172 (384)
T ss_dssp EECCCSCCCCCCEEEEETCCEEECCCCCSEE-SCEEEEEEETTEECCCSS------SEEECTTTCCEEESSCCGGGCEEE
T ss_pred cccccccCCCCceeEEcCCCeEEecCCCCCC-CCeEEEEEECCCCCEeec------cEEEEcCCCcEEEeecCHHHCceE
Confidence 7776666566778999999999999754322 235779999998875332 2222 3567899999999999999
Q ss_pred EEEEEeCCCceEE---EEEEEEeC-------CCC----CCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCC
Q psy12061 158 ECVVKSTVGKIST---KTTVIVEG-------PPG----LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 223 (626)
Q Consensus 158 ~C~a~n~~g~~~~---~~~l~v~~-------~P~----~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~ 223 (626)
+|.|.|..|.... ...+.+.. +|. .|..+ .......+.|.|.. ...+....
T Consensus 173 ~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~--~~~~G~~v~l~C~~-------------~g~P~p~i 237 (384)
T 3kld_A 173 TCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETV--PAEKGTTVKLECFA-------------LGNPVPTI 237 (384)
T ss_dssp EEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEE--EEETTSCEEEEEEE-------------EEESCCEE
T ss_pred EEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCce--EecCCCcEEEEEEE-------------eecCCCcE
Confidence 9999999876432 11222210 010 11111 11223344444442 11111112
Q ss_pred CceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCe
Q psy12061 224 TWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGD 303 (626)
Q Consensus 224 ~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~ 303 (626)
.|.+..................+.|.+ +...+.+.|+|.|.|..|........ .+...+.. ...+.+..+... ..
T Consensus 238 ~W~k~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~~~~~l-~v~~~P~~-~~~~~~~~v~~g--~~ 312 (384)
T 3kld_A 238 LWRRADGKPIARKARRHKSNGILEIPN-FQQEDAGSYECVAENSRGKNVAKGQL-TFYAQPNW-VQIINDIHVAME--ES 312 (384)
T ss_dssp EEEETTCCCCCTTCEECTTSCEEEECS-CCGGGCEEEEEEEEETTEEEEEEEEE-EEEEEEEE-EECCCCEEECTT--CC
T ss_pred EEEeCCCccccccceecCCCcEEEECC-CChhhCEEEEEEEEcCCCeEEEEEEE-EEecCCcc-ccCCCceEecCC--CC
Confidence 232211110000000011223466655 99999999999999999865322211 11111100 012223333332 34
Q ss_pred EEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccE
Q psy12061 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVV 381 (626)
Q Consensus 304 v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~ 381 (626)
+.|..... + .+.- .|.|.+.+..-........ ....+.|..+.......|+|.|.|..|....+..+
T Consensus 313 v~l~C~~~----g-~P~p--~i~W~k~g~~l~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L 379 (384)
T 3kld_A 313 VFWECKAN----G-RPKP--TYRWLKNGDPLLTRDRIQI----EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAEL 379 (384)
T ss_dssp EEEECEEE----E-ESCC--EEEEEETTEECCCBTTEEE----ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEeECC----c-cCCC--eEEEEECCEECCCCccEEE----eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEE
Confidence 55544431 1 1111 4667666521100000010 11256788888778888999999999875433333
No 37
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.95 E-value=1.4e-25 Score=221.73 Aligned_cols=365 Identities=13% Similarity=0.159 Sum_probs=224.5
Q ss_pred CCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCC------------CCceEeecceeeeeeeccCCceeEEEE
Q psy12061 182 LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN------------STWFNVSEHVIGKEVDRYTGRKEASIE 249 (626)
Q Consensus 182 ~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~------------~~w~~~~~~~~~~~~~~~~~~~~~~i~ 249 (626)
+|.++.|.......+++.|+++.+.... ..|.+.++.... ..|....... .....+.+.
T Consensus 5 ~~~~l~C~~~~~~~~~C~W~~~~~~~~~-~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~~~~~--------~~~~~C~~~ 75 (419)
T 2gys_A 5 PLQTLRCYNDYTSHITCRWADTQDAQRL-VNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPR--------CVPRRCVIP 75 (419)
T ss_dssp HHHHCEEEECSSSEEEEEEEEEHHHHTT-CCEEEEEEEETTEEEECCEEECSCCTTSCCCSSS--------EEEEEEEEE
T ss_pred cCCCceEEeCCCEEEEEEeeCCcCCCCc-ccEEEEeecCCcCCccceeccccCcccccCCCCC--------ccccEeEeC
Confidence 4668889888888999999976432222 346666653211 1111110000 001233332
Q ss_pred -eeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCc----ccCcceEE
Q psy12061 250 -NVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ----NAPNIYYK 324 (626)
Q Consensus 250 -~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~----~~~~~~y~ 324 (626)
..+.....|.|+|+|.|..|... .+.......+.||.++.+.... ..+.|+|++++.... ......|.
T Consensus 76 ~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~ 148 (419)
T 2gys_A 76 CQSFVVTDVDYFSFQPDRPLGTRL------TVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFE 148 (419)
T ss_dssp CSCCCTTCEEEEEEEESSCCCEEE------EEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEE
T ss_pred CcceeeecccEEEEeCCccccccc------eEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEE
Confidence 12455678999999988776432 2233333455789999887755 699999999654332 13568899
Q ss_pred EEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCC------CCCCCccEEEEccCCCCCCCCCceE
Q psy12061 325 IFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVG------PGPESEVVTIFSAEDMPQVAPQGVF 398 (626)
Q Consensus 325 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g------~~~~s~~~~~~t~~~~p~~~p~~~~ 398 (626)
|+|+..+ ..|...... ..+.....+.+.+|.|++.|.|+|+|.+..| .|.||..+.+.+.+..|. +|.++.
T Consensus 149 v~yr~~~-~~w~~~~~~-~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~-~p~~l~ 225 (419)
T 2gys_A 149 VVYKRLQ-DSWEDAAIL-LSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEA-QPQNLE 225 (419)
T ss_dssp EEEEETT-SCSTTCEEE-EESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTT-SCEEEE
T ss_pred EEEccCC-CChhheeee-cccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccC-CCceEE
Confidence 9999886 677655432 1122223333448999999999999999642 345677888888887765 899999
Q ss_pred EEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-----ccce---EEEEecC------ccceEEEeCCccCce
Q psy12061 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-----EETA---VYYLSRT------TRNWALIVGLQPDTK 464 (626)
Q Consensus 399 ~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-----~~~~---~~~~~~~------~~~~~~i~~L~p~t~ 464 (626)
+...+.+.+.+.|+++.... + -.+|.|+|+..... .... ....... ....+.+.+|.+.+.
T Consensus 226 c~~~~~~~l~c~W~~~~~~~----~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~ 300 (419)
T 2gys_A 226 CFFDGAAVLSCSWEVRKEVA----S-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQ 300 (419)
T ss_dssp EEECSSSEEEEEEEEEHHHH----T-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCE
T ss_pred EEECCceEEEeEEECCCCCC----C-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCE
Confidence 99888999999999863211 1 13599998765321 1110 1111101 112466788899999
Q ss_pred EEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcccc
Q psy12061 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN 544 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~ 544 (626)
|.|+|.|.+..+ .+.....+.+.|| .+.+.. ..+.+.|+|++|.....+ .+.+|+|.|+..+..+.. .
T Consensus 301 y~i~V~a~~~~~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~~~~-~~l~Yev~y~~~~~~w~~-~ 368 (419)
T 2gys_A 301 YIVSVQPRRAEK--------HIKSSVNIQMAPP-SLQVTK-DGDSYSLRWETMKMRYEH-IDHTFEIQYRKDTATWKD-S 368 (419)
T ss_dssp EEEEEEECCCCE--------EEEGGGSBCCCCC-EEEEC----CCCEEEEEC---------CEEEEEEEECSSSCSTT-S
T ss_pred EEEEEEEccCCc--------cccceEEEEECCC-CeEEEE-eCCeEEEEECCCcccccc-cceEEEEEEEcCCCCcce-e
Confidence 999999875432 1222333345566 566555 478999999953222223 567999999876543221 1
Q ss_pred ceeeecCccceEEecCCCCCceEEEEEEEEecCC--CCCCC
Q psy12061 545 DTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG--DGRMS 583 (626)
Q Consensus 545 ~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G--~g~~s 583 (626)
...... +.+.+.|.+|+|++.|.|+|+|.+..| .|.+|
T Consensus 369 ~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS 408 (419)
T 2gys_A 369 KTETLQ-NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWS 408 (419)
T ss_dssp CEEEEE-SCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCC
T ss_pred eccccc-cccEEEeccCCCCCeEEEEEEEEEcCCCCCCccC
Confidence 122222 678899999999999999999999874 45343
No 38
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.95 E-value=1.2e-26 Score=228.97 Aligned_cols=286 Identities=15% Similarity=0.118 Sum_probs=191.1
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a 368 (626)
.+|.++.+.... ..+.|+|+++ .+.++++. |.|+|+..+...|...............++..+|.+++.|.|||+|
T Consensus 9 ~~P~nv~~~~~~-~~~~L~W~p~--~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A 84 (414)
T 3se4_A 9 KSPQKVEVDIID-DNFILRWNRS--DESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 84 (414)
T ss_dssp --CCCCCEEEET-TEEEEC------------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEE
T ss_pred CCCceeEEEEEC-CceEEEEcCC--CCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEE
Confidence 467888887654 5789999994 34455666 9999998777788754322222223445556678999999999999
Q ss_pred ecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccc---cceeeEEEEEEEEecCCCccceEEE
Q psy12061 369 INDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIREN---IRGRLIGHRIKYWKEDNPEETAVYY 445 (626)
Q Consensus 369 ~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~---~~~~i~~Y~v~~~~~~~~~~~~~~~ 445 (626)
.| .+.+.++....+.+....+.++| .+.+... .+++.|+|+ |...+.. .++.+.+|.|.||+.+......
T Consensus 85 ~n-~~~S~~s~~~~~~~~~~~~~~pP-~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~--- 157 (414)
T 3se4_A 85 EK-ENTSSWYEVDSFTPFRKAQIGPP-EVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEER--- 157 (414)
T ss_dssp EE-TTEEEEEECCCBCHHHHCCCCCC-EEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEE---
T ss_pred ee-CCcCCCEecCceeecccceeCCC-eEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEE---
Confidence 99 66655544333333333444466 4776654 468999999 6533210 2357889999999887654322
Q ss_pred EecCccceEEEeCCccCceEEEEEEEeeC--CCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCC
Q psy12061 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNN--AGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE 523 (626)
Q Consensus 446 ~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~--~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~ 523 (626)
.......+.|.+|.|++.|.|+|+|.|. .|.|+.|....+.|.++.|..+|.++.+...+ +++.|.|++ |.
T Consensus 158 -~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~~-~~~~l~W~p--p~--- 230 (414)
T 3se4_A 158 -IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN-QNYVLKWDY--TY--- 230 (414)
T ss_dssp -EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEET-TEEEEEEEC--SS---
T ss_pred -EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEec-CCeEEEECC--CC---
Confidence 1234456999999999999999999994 68888888888888887787889999988765 679999994 32
Q ss_pred CceeeEEEEEEEec-----cCCcccccee--eecCccceEEec-CCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 524 EPIIGYKVRVWEVD-----QDMSRANDTI--IPVGNTLDADIV-DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 524 ~~i~~Y~i~~~~~~-----~~~~~~~~~~--~~~~~~~~~~l~-~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+. .+|.|+|+... .+....+..+ ......+.+.+. +|.+++.|.|+|+|+|..|.|++|+. ..|.+...
T Consensus 231 ~~-~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~-~~~~t~~~ 307 (414)
T 3se4_A 231 AN-MTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEE-IKFDTEIQ 307 (414)
T ss_dssp SS-CEEEEEEEESGGGSCCCC--CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCC-EEEETTCC
T ss_pred CC-eEEEEEEEehhccccccccccCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCccccccc-ccccchhc
Confidence 22 39999998631 0000011111 112234566675 69999999999999999999999965 45655543
No 39
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.94 E-value=9.5e-26 Score=200.10 Aligned_cols=196 Identities=19% Similarity=0.257 Sum_probs=152.6
Q ss_pred CCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-ccceEEEEecCccceEEEeCCccCceEE
Q psy12061 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 388 ~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
+.|. +|.++++.. +.+++.|+|+++.+.+ +.|.+|.|+|+..... .+.............+.+ +|+|++.|.
T Consensus 4 ~~P~-~P~~~~~~~-~~~sv~l~W~~p~~~~----~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~ 76 (205)
T 1cfb_A 4 DVPN-APKLTGITC-QADKAEIHWEQQGDNR----SPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYT 76 (205)
T ss_dssp CCCC-CCEEEEEEE-CSSEEEEEEECCCCTT----SCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEE
T ss_pred cCCC-CCCCcEEEe-cCCEEEEEEECcccCC----CceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEE
Confidence 4455 899999999 9999999999985432 6799999999765432 232222233344455776 999999999
Q ss_pred EEEEEeeCCCCCCCC-ccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccc
Q psy12061 467 VKVMAYNNAGEGPES-ERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545 (626)
Q Consensus 467 v~V~a~~~~g~s~~s-~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~ 545 (626)
|+|+|.|..|.|+++ ....++|.+..|+.+|.++++...+.+++.|+|++++..+.+|.|.+|.|+|+..+.... ..
T Consensus 77 ~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~--~~ 154 (205)
T 1cfb_A 77 FRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAA--WE 154 (205)
T ss_dssp EEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCC--CE
T ss_pred EEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCC--cE
Confidence 999999999999988 568899999999888999999988999999999954433788999999999887655421 22
Q ss_pred ee-eecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 546 TI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 546 ~~-~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
.. ......+.+.|.+|.|++.|.|+|+|+|..|.|++++..+.+++.
T Consensus 155 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 155 NNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 22 223367899999999999999999999999999965444545554
No 40
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.94 E-value=6.1e-26 Score=225.14 Aligned_cols=341 Identities=19% Similarity=0.284 Sum_probs=214.0
Q ss_pred CCCCceEEEEeeeCC-CCCCeeEEEeCCEEccC--CCcEEEccCCcEEEccC-----CCCCCEEEEEEEEcCCCCc--ee
Q psy12061 2 AGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGS--GGRRKIFENGNLLISPV-----SRDDSGIYSCTATNVHGMD--ES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~i~~--~~~~~~~~~g~L~i~~v-----~~~d~G~Y~C~a~n~~g~~--~~ 71 (626)
+.+|++++|.|.+.+ .|.+.|.|+|||..+.. ..+..+..+++|.|.++ +.+|+|.|+|.|.|..+.. ..
T Consensus 33 v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~ 112 (403)
T 3laf_A 33 TMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISR 112 (403)
T ss_dssp ECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECC
T ss_pred EecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEE
Confidence 578999999999977 58889999999999863 57888888999999998 6779999999999754432 33
Q ss_pred eEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCC
Q psy12061 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 151 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 151 (626)
.+.+.|..+|.+. ..+....+.+|++++|.|.+.+.|.+ .+.|+|++..+.... .........++.|.|.+++.
T Consensus 113 ~~~l~v~~p~~~~-~~~~~~~~~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~---~~~~~~~~~~~~L~i~~~~~ 186 (403)
T 3laf_A 113 TAKVMVAGPLRFL-SQTESITAFMGDTVLLKCEVIGDPMP--TIHWQKNQQDLNPIP---GDSRVVVLPSGALQISRLQP 186 (403)
T ss_dssp CEEEEECCCCEEC-SCCCCEEEETTSCEEECCCEECSSCC--EEEEEESSSBCCCCT---TCCSEEECTTSCEEECSCCG
T ss_pred EEEEEecCCCccc-cCCCcEEEEcCCeEEEEEEEcccCCC--eEEEEECCEeccccC---CceEEEEcCCceEEEccccc
Confidence 4677776655554 45778899999999999999998876 569999998875321 01122334567999999999
Q ss_pred CCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCCCceEEE-------EEeccceEEEEecCCCCCCcccEEEEEEeecCCC
Q psy12061 152 ADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPGGVQVV-------EVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 223 (626)
Q Consensus 152 ~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p~~~~~~-------~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~ 223 (626)
+|+|.|+|.+.|..|.. +..+.+.+...|..+..+... ......+.|.|.. ...+....
T Consensus 187 ~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~-------------~~~p~~~~ 253 (403)
T 3laf_A 187 GDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV-------------SGYPPPSF 253 (403)
T ss_dssp GGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEE-------------EEESCCEE
T ss_pred ccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEc-------------CCCCCCeE
Confidence 99999999999988764 466788888777654333221 1223445555442 22122222
Q ss_pred CceEeecceeeee-eeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcC
Q psy12061 224 TWFNVSEHVIGKE-VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIG 302 (626)
Q Consensus 224 ~w~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~ 302 (626)
.|.+....+.... .........+.+.+ +...+.+.|+|.|.|..|....+... .+..++.. ...|.+..+.. ..
T Consensus 254 ~W~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~~-~~~~~~~~~~~--g~ 328 (403)
T 3laf_A 254 TWLRGEEVIQLRSKKYSLLGGSNLLISN-VTDDDSGTYTCVVTYKNENISASAEL-TVLVPPWF-LNHPSNLYAYE--SM 328 (403)
T ss_dssp EEEETTEECCCSSSSEEEETTTEEEECS-CCGGGCEEEEEEEEETTEEEEEEEEE-EEEEEEEE-EECCCCEECCT--TC
T ss_pred EEEECCeeccCCCceEEECCccEEEEeC-CCHHHCEEEEEEEEcCCCceEEEEEE-EEECCCcE-eecCcceEEec--CC
Confidence 3443322211100 00001223456655 99999999999999998854322221 11111110 11233333333 23
Q ss_pred eEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCC
Q psy12061 303 DLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376 (626)
Q Consensus 303 ~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~ 376 (626)
.+.|..... +. +.. .+.|.+.+............ ....+.+.++.......|+|.|.|..|...
T Consensus 329 ~v~l~C~~~----g~-p~p--~v~W~~~g~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 329 DIEFECAVS----GK-PVP--TVNWMKNGDVVIPSDYFQIV---GGSNLRILGVVKSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp CEEECCEEE----EE-SCC--EEEEEETTEECCCSSSEEEE---TTTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEEEEEEEe----ec-cCC--EEEEEECCEECCCCCcEEEe---cCccEEEeccccccCEEEEEEEEcCCceEE
Confidence 455555431 11 111 46776665211000000000 112466778877777889999999988754
No 41
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.94 E-value=2.9e-26 Score=202.36 Aligned_cols=163 Identities=20% Similarity=0.343 Sum_probs=130.5
Q ss_pred CCCCceEEEEeeeCC-CCCCeeEEEeCCEEccCCCcEEEccCC-----cEEEccCCCCCCEEEEEEEEcCCCCceeeEEE
Q psy12061 2 AGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRRKIFENG-----NLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~i~~~~~~~~~~~g-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 75 (626)
+.+|+.++|.|.+.+ .|.|+|.|+|||.+|..+.++.+..++ +|.|.+++.+|+|.|+|.|.| |.....+.+
T Consensus 14 v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~ 91 (207)
T 3rbs_A 14 ILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKATNHSTV 91 (207)
T ss_dssp ECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTEEEEEEE
T ss_pred EEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCeEEEEEE
Confidence 578999999999964 799999999999999887777775443 599999999999999999999 554544444
Q ss_pred EEE---------------------eCCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccCCccC
Q psy12061 76 IVL---------------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELE 133 (626)
Q Consensus 76 ~v~---------------------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~~ 133 (626)
.+. .+|.+... + +..+.+|++++|.|.+.+. |.| +|.|+|||.++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~-~~~v~~g~~v~l~C~v~g~~P~p--~i~W~k~g~~l~~~~----- 162 (207)
T 3rbs_A 92 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY-L-SWEVTGECNVLLKCKVANIKKET--HIVWYKDEREISVDE----- 162 (207)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHTSSEEEEE-E-EEEEETTTEEEEEEEEESCCTTC--EEEEEETTEEECCCC-----
T ss_pred EEEccchhhhcccccccccccccCCCCceEec-C-CcEEcCCCcEEEEEEEeCCCCCC--EEEEEECCEECCCCC-----
Confidence 321 14554443 2 4788999999999999998 776 558999999997642
Q ss_pred CCeeEe--cCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 134 TPNINI--DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 134 ~~~~~~--~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
++.. ....|.|.+++.+|+|.|+|.|.|..|..+..+.|..+
T Consensus 163 --~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 163 --KHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp --CCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred --ceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 2222 23469999999999999999999999999999888653
No 42
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.94 E-value=6.5e-26 Score=202.67 Aligned_cols=175 Identities=26% Similarity=0.500 Sum_probs=144.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc-CCCcEEEcc--CC--cEEEccCCC-CCCEEEEEEEEcCCCC-ceeeEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFE--NG--NLLISPVSR-DDSGIYSCTATNVHGM-DESKGR 74 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~-~~~~~~~~~--~g--~L~i~~v~~-~d~G~Y~C~a~n~~g~-~~~~~~ 74 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+. ...++.+.. +| +|.|.+++. +|+|.|+|.|.|..|. ....+.
T Consensus 18 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~ 97 (212)
T 2yd1_A 18 VRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADAT 97 (212)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEE
T ss_pred EecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEE
Confidence 5789999999999999999999999999997 556666643 33 699999999 9999999999999998 677889
Q ss_pred EEEEeCC------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEee
Q psy12061 75 LIVLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 148 (626)
Q Consensus 75 l~v~~~p------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 148 (626)
|.|...+ +.+...+....+..|++++|.|.+.+.|.| .+.|++++..+.... .++...++.|.|.+
T Consensus 98 l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~~------~~~~~~~~~L~i~~ 169 (212)
T 2yd1_A 98 LTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTP--NIYWIKNQTKVDMSN------PRYSLKDGFLQIEN 169 (212)
T ss_dssp EEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCC--EEEEEETTEECCTTS------TTEEEETTEEEECS
T ss_pred EEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCC--eEEEEECCeEcccCC------CeEEccCCeEEEcc
Confidence 9998752 233345677889999999999999999877 469999999987542 45566778999999
Q ss_pred cCCCCCEeEEEEEEeCCCceEEE-EEEEEeCCCCCCC
Q psy12061 149 ASFADAGEYECVVKSTVGKISTK-TTVIVEGPPGLPG 184 (626)
Q Consensus 149 ~~~~d~g~Y~C~a~n~~g~~~~~-~~l~v~~~P~~p~ 184 (626)
++.+|+|.|+|.|.|..|..... +.|.|...+..+.
T Consensus 170 v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~~~ 206 (212)
T 2yd1_A 170 SREEDQGKYECVAENSMGTEHSKATNLYVKVRRVGTK 206 (212)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C--
T ss_pred CChhhCEEEEEEeecCCCceeEEEEEEEEEecccccc
Confidence 99999999999999999998765 8999998776553
No 43
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.94 E-value=1e-25 Score=221.60 Aligned_cols=335 Identities=18% Similarity=0.229 Sum_probs=206.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEccCCcEEEccCCC-CCCEEEEEEEEcCCCCcee-eEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSR-DDSGIYSCTATNVHGMDES-KGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~~g~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~-~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|+|.|+|||..|... .++.+ .+++|.|.++.. +|+|.|+|.|.|..|...+ .+.|.|
T Consensus 19 ~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~-~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v 97 (382)
T 1cs6_A 19 GSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRL-VAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRF 97 (382)
T ss_dssp TCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEE-ETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEe-eCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEe
Confidence 368999999999999999999999999998743 55554 578899999997 9999999999999887544 578888
Q ss_pred EeCCceeeeCCCceEEecCCcEEEEEEec-ccCCcceeEEEeeCCEEeccccCCccCCCee-EecCCeEEEeecCCCCCE
Q psy12061 78 LHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDGGLLEITNASFADAG 155 (626)
Q Consensus 78 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g 155 (626)
...|.+...++....+.+|++++|.|.+. +.|. ..+.|++++..+.... ...+. ...++.|.|.+++.+|+|
T Consensus 98 ~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~--~~i~W~~~~~~~~~~~----~~~~~~~~~~~~L~i~~~~~~d~G 171 (382)
T 1cs6_A 98 GFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPA--LSYRWLLNEFPNFIPA----DGRRFVSQTTGNLYIAKTEASDLG 171 (382)
T ss_dssp EEECCCCSSCCCCEEEETTSCEEECCCCCSEESC--CEEEEEESSTTCBCCC----CSSEEECTTTCCEEESSCCGGGCE
T ss_pred eccccccccCCCceEEecCCcEEEEeCCCCCCCC--cEEEEEECCCcccccc----CceEEEecCceEEEEEeeCcccCe
Confidence 77777666667788999999999999964 4454 4679999987653211 01122 224578999999999999
Q ss_pred eEEEEEEeCCCceEE-----EEEEEEeCC------CC----CCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeec
Q psy12061 156 EYECVVKSTVGKIST-----KTTVIVEGP------PG----LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTN 220 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~-----~~~l~v~~~------P~----~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~ 220 (626)
.|+|.+.|..|.... .+.|.+... |. .|.. ........+.|.|... ..+.
T Consensus 172 ~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~--~~~~~G~~v~l~C~~~-------------g~p~ 236 (382)
T 1cs6_A 172 NYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPAD--TYALTGQMVTLECFAF-------------GNPV 236 (382)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSE--EEEETTCCEEEECEEE-------------EESC
T ss_pred eEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCc--eEEeCCCeEEEEEEEc-------------cCCC
Confidence 999999998864332 234554321 10 1111 1222344555555421 1111
Q ss_pred CCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCC
Q psy12061 221 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGK 300 (626)
Q Consensus 221 ~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~ 300 (626)
....|.+....+.. ........+.+.+ +...+.+.|+|.|.|..|........ .+...+... ..+....+..+
T Consensus 237 ~~i~W~~~~~~~~~---~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~~~-~~~~~~~~~~g- 309 (382)
T 1cs6_A 237 PQIKWRKLDGSQTS---KWLSSEPLLHIQN-VDFEDEGTYECEAENIKGRDTYQGRI-IIHAQPDWL-DVITDTEADIG- 309 (382)
T ss_dssp CEEEEEECCSCCSC---CCSBSSSEEEECS-CCGGGCEEEEEEEEETTEEEEEEEEE-EEEEEEEEE-ECCCCEEEETT-
T ss_pred CEEEEEECCccccc---EEecCCcEEEEcc-CChhhCEEEEEEEEcCCCeEEEEEEE-EEecCCCcc-cCCCccEEcCC-
Confidence 11233332222111 0012233556655 89999999999999998864322111 111111100 12223333332
Q ss_pred cCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCC
Q psy12061 301 IGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPE 377 (626)
Q Consensus 301 ~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~ 377 (626)
..+.|..... +. +.. .+.|.+.+........... ....+.+.++.......|+|.|.|..|....
T Consensus 310 -~~~~l~C~~~----g~-p~p--~v~W~~~g~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 374 (382)
T 1cs6_A 310 -SDLRWSCVAS----GK-PRP--AVRWLRDGQPLASQNRIEV----SGGELRFSKLVLEDSGMYQCVAENKHGTVYA 374 (382)
T ss_dssp -CCEEEECEEE----EE-SCC--EEEEEETTEECCCCSSEEE----ETTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred -CeEEEEEEee----ee-cCC--EEEEEECCEECCCCceEEE----ECCEEEECcCCcccCEEEEEEEEeCCCeEEE
Confidence 3455555441 11 111 4667666511100000010 1125778888888888899999999887543
No 44
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.94 E-value=9.8e-26 Score=204.30 Aligned_cols=194 Identities=25% Similarity=0.365 Sum_probs=156.4
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~ 468 (626)
.|+.+|.++++...+.+++.|+|+++. +.+.+|.|+|+..+......... .....++.+.+|+|++.|.|+
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p~-------g~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPPS-------GKPMGYRVKYWIQGDSESEAHLL--DSKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECCS-------SCCCEEEEEEEETTSCGGGCEEE--EESSSEEEECSCCTTCEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECCC-------CccceEEEEEEECCCCccceEEE--cCCccEEEECCCCCCCEEEEE
Confidence 456699999999999999999999972 56899999998776554333222 245566999999999999999
Q ss_pred EEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccc--cc-
Q psy12061 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA--ND- 545 (626)
Q Consensus 469 V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~--~~- 545 (626)
|+|+|..|.|++|..+.++|.+..|. +|.++++...+.+++.|+|+ +|...+|.|.+|.|+|+..+...... ..
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~ 151 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQEVPS-EPGRLAFNVVSSTVTQLSWA--EPAETNGEITAYEVCYGLVNDDNRPIGPMKK 151 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCC-CCCCCEEEECSSSCEEEECC--CCSCCSSCCCEEEEEEEEBCTTSCBSSCCEE
T ss_pred EEEEeCCCcCCCCCeEEEEcCCCCCC-CCCccEEEEecCCEEEEEEc--CCCCCCCceeEEEEEEEECCCCCCccCcceE
Confidence 99999999999999999999988886 57799999999999999999 56778899999999988765542211 11
Q ss_pred eeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 546 ~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
........+.+.|.+|.|++.|.|+|+|+|..|.|++|++.+.+++.+.
T Consensus 152 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 152 VLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp CCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 1223345678999999999999999999999999999865555666543
No 45
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.94 E-value=8.2e-26 Score=212.26 Aligned_cols=281 Identities=11% Similarity=0.064 Sum_probs=181.1
Q ss_pred CCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEe-eccCCceE
Q psy12061 180 PGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIEN-VLVPWSTY 258 (626)
Q Consensus 180 P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~-~l~~~~~y 258 (626)
..+|.++++... ..++.|+|+++.++..++. |.|+++..+...|........ .....+.+.. .|.++..|
T Consensus 4 l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~-------~~~~~c~lt~~~l~~~~~Y 74 (306)
T 3s98_A 4 LKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQN-------ITSTKCNFSSLKLNVYEEI 74 (306)
T ss_dssp ----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSS-------BSSSEEECCC---CTTSCE
T ss_pred CCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccC-------CCCCEEEccccccCCCCcE
Confidence 457899999755 5668899999876656665 999999988888987533221 1112222221 27899999
Q ss_pred EEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCc-----ccCcceEEEEEEecCCC
Q psy12061 259 EFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQ-----NAPNIYYKIFWRKKNDT 333 (626)
Q Consensus 259 ~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~-----~~~~~~y~i~~~~~~~~ 333 (626)
.|||+|.| .|.+.++... .+.+....+..+|. +.+.... .+|.|.|+| +...+ ++.+.+|.|.|+..+..
T Consensus 75 ~~rV~A~n-~~~S~~s~~~-~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P-~~~~~~~~~~~g~~l~Y~v~y~~~~~~ 149 (306)
T 3s98_A 75 KLRIRAEK-ENTSSWYEVD-SFTPFRKAQIGPPE-VHLEAED-KAIVIHISP-GTKDSVMWALDGLSFTYSLVIWKNSSG 149 (306)
T ss_dssp EEEEEEEC-SSCEEEEECC-CBCHHHHCBCCCCE-EEEEECS-SCEEEEEEC-C---CCCC-----CCEEEEEEEETTTC
T ss_pred EEEEEEEe-CCcCCCEeee-eEechhhCccCCCe-EEEEEcC-CEEEEEEEC-CCCCCcceeccCCcEEEEEEEEECCCC
Confidence 99999999 7766544332 33333333445664 6666544 689999995 33221 46789999999987743
Q ss_pred c-ceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEec--CCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEE
Q psy12061 334 E-FQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAIN--DVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVT 410 (626)
Q Consensus 334 ~-~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n--~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~ 410 (626)
. |. . . .....+.|.+|.|++.|.|+|+|.+ ..|.|.+|....+.|..+.|..+|.++.+... .+++.|+
T Consensus 150 ~~~~-~--~----~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~-~~s~~l~ 221 (306)
T 3s98_A 150 VEER-I--E----NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ-NQNYVLK 221 (306)
T ss_dssp CCEE-E--E----EECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEE-TTEEEEE
T ss_pred CeEE-E--e----cccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEe-cCEEEEE
Confidence 3 33 1 1 1234678999999999999999999 67899999999999988888889999998765 5789999
Q ss_pred eeeccccccccceeeEEEEEEEEe--------cCCCccceEEEEecCccceEEEeCC-ccCceEEEEEEEeeCCCCCCCC
Q psy12061 411 WNPIELIRENIRGRLIGHRIKYWK--------EDNPEETAVYYLSRTTRNWALIVGL-QPDTKYYVKVMAYNNAGEGPES 481 (626)
Q Consensus 411 W~~~~~~~~~~~~~i~~Y~v~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~L-~p~t~Y~v~V~a~~~~g~s~~s 481 (626)
|+++.... +|.+.+.. .+...+.............+.+.++ .+...|.|||+|.|..|.|.+|
T Consensus 222 W~~p~~~~--------~~~v~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s 293 (306)
T 3s98_A 222 WDYTYANM--------TFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWS 293 (306)
T ss_dssp EECSSSSC--------EEEEEEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCC
T ss_pred eCCCCCcE--------EEEEEEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCCCccccc
Confidence 99875321 44444432 1122221100011233455778874 4656999999999999999999
Q ss_pred ccEEEeecC
Q psy12061 482 ERYLERTYR 490 (626)
Q Consensus 482 ~~~~~~t~~ 490 (626)
....|.|..
T Consensus 294 ~~~~~~~~~ 302 (306)
T 3s98_A 294 EEIKFDTEI 302 (306)
T ss_dssp CCEEEEC--
T ss_pred cccccCccc
Confidence 999988763
No 46
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.94 E-value=2.4e-25 Score=211.37 Aligned_cols=170 Identities=24% Similarity=0.444 Sum_probs=131.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc--cCC---cEEEccCCC-CCCEEEEEEEEcCCCCceeeEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENG---NLLISPVSR-DDSGIYSCTATNVHGMDESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~--~~g---~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l 75 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+... ++.+. .+| +|.|.+++. +|+|.|+|.|.|..|.....+.|
T Consensus 18 v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 96 (304)
T 2yd9_A 18 GVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKL 96 (304)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEE
T ss_pred ecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEE
Confidence 568999999999999999999999999998643 44443 333 599999998 99999999999999998888999
Q ss_pred EEEeCC------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCee-EecCCeEEEee
Q psy12061 76 IVLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDGGLLEITN 148 (626)
Q Consensus 76 ~v~~~p------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~ 148 (626)
.|...+ +.+...|....+..|++++|.|.+.+.|.| .+.|++++..+..... ..++ ...++.|.|.+
T Consensus 97 ~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~k~~~~~~~~~~----~~~~~~~~~~~L~i~~ 170 (304)
T 2yd9_A 97 TVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVDPSAS----NGRIKQLRSGALQIES 170 (304)
T ss_dssp EEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCC--EEEEEETTEECCGGGG----TTSEEECTTSCEEECS
T ss_pred EEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCC--eEEEEECCEECcCCCC----cceEEeCCCeEEEEcc
Confidence 998752 233345677889999999999999999876 5699999999875421 1222 34567999999
Q ss_pred cCCCCCEeEEEEEEeCCCceEEE-EEEEEeC
Q psy12061 149 ASFADAGEYECVVKSTVGKISTK-TTVIVEG 178 (626)
Q Consensus 149 ~~~~d~g~Y~C~a~n~~g~~~~~-~~l~v~~ 178 (626)
++.+|+|.|+|.|.|..|..... +.|.|..
T Consensus 171 ~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~ 201 (304)
T 2yd9_A 171 SEETDQGKYECVATNSAGVRYSSPANLYVRV 201 (304)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCcccCEEEEEEEEeCCCCEEeccEEEEEEe
Confidence 99999999999999999976543 5666654
No 47
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.94 E-value=9.8e-26 Score=223.67 Aligned_cols=248 Identities=22% Similarity=0.356 Sum_probs=179.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc---CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce-eeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG---SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE-SKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~---~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+. ...+..+..+++|.|.+++.+|+|.|+|.|.|..|... ..+.+.|
T Consensus 133 ~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v 212 (403)
T 3laf_A 133 AFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRI 212 (403)
T ss_dssp EETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEE
T ss_pred EEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEE
Confidence 4689999999999999999999999999884 45677777788999999999999999999999888744 5678888
Q ss_pred EeCCce-----eeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCC
Q psy12061 78 LHGPSY-----YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 152 (626)
Q Consensus 78 ~~~p~~-----~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 152 (626)
...|.. +...+....+.+|++++|.|.+.+.|.| .+.|++++..+.... .......++.|.|.+++.+
T Consensus 213 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~--~~~W~~~~~~~~~~~-----~~~~~~~~~~L~i~~~~~~ 285 (403)
T 3laf_A 213 LSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPP--SFTWLRGEEVIQLRS-----KKYSLLGGSNLLISNVTDD 285 (403)
T ss_dssp ECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCC--EEEEEETTEECCCSS-----SSEEEETTTEEEECSCCGG
T ss_pred ecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCC--eEEEEECCeeccCCC-----ceEEECCccEEEEeCCCHH
Confidence 776642 3345777889999999999999998876 569999999886542 1223346678999999999
Q ss_pred CCEeEEEEEEeCCCceEEEEEEEEeCCCC---CCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEee
Q psy12061 153 DAGEYECVVKSTVGKISTKTTVIVEGPPG---LPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~---~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~ 229 (626)
|+|.|+|.|.|..|..+..+.|.|..+|. .|.+.. ......+.|.|... ..+.....|.+.+
T Consensus 286 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~--~~~g~~v~l~C~~~-------------g~p~p~v~W~~~g 350 (403)
T 3laf_A 286 DSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLY--AYESMDIEFECAVS-------------GKPVPTVNWMKNG 350 (403)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEE--CCTTCCEEECCEEE-------------EESCCEEEEEETT
T ss_pred HCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceE--EecCCeEEEEEEEe-------------eccCCEEEEEECC
Confidence 99999999999999999999999987663 222221 12233444444421 1111112233322
Q ss_pred cceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
..+.............+.+.. +...+.+.|+|.|.|..|...
T Consensus 351 ~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 351 DVVIPSDYFQIVGGSNLRILG-VVKSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp EECCCSSSEEEETTTEEEESS-CCGGGCEEEEEEEEETTEEEE
T ss_pred EECCCCCcEEEecCccEEEec-cccccCEEEEEEEEcCCceEE
Confidence 221111100111223456655 889999999999999998653
No 48
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.94 E-value=2.8e-25 Score=228.09 Aligned_cols=256 Identities=13% Similarity=0.083 Sum_probs=176.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe-CCEEccCCCcEEEccCCcEEEccCCCCCCE-EEEEEEEcCCCCcee-eEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDES-KGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~-~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.+.|.|+| ||..+..+.++.+..++.|.|.+++.+|+| .|+|.|.|..|...+ .+.|.|.
T Consensus 126 v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 205 (524)
T 2ec8_A 126 GKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVR 205 (524)
T ss_dssp EETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEE
T ss_pred EEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEE
Confidence 5689999999999997778999988 899998888888888889999999999999 999999998777644 7888887
Q ss_pred ---eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEe--ccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 79 ---HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI--GNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 79 ---~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
..|+.+...+....+.+|++++|.|.+.+.|.|. ++.|++++..+ .................+.|.|.+++.+|
T Consensus 206 ~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 284 (524)
T 2ec8_A 206 PAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSV-YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVND 284 (524)
T ss_dssp CCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTC-EEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTT
T ss_pred eCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcE-EEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHH
Confidence 2334444457778999999999999999988764 47999999883 22210000001112345789999999999
Q ss_pred CEeEEEEEEeCCCceEEEEEEEEeCCCCCCCc----eEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEee
Q psy12061 154 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~----~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~ 229 (626)
+|.|+|.|.|..|..+..+.|.|..+|..... ..........+.|.|..... ..+. .+. |.+.+
T Consensus 285 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~-P~p~---~v~--------W~k~g 352 (524)
T 2ec8_A 285 SGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAF-PKPE---HQQ--------WIYMN 352 (524)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEE-SCCC---EEE--------EESSS
T ss_pred CEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeec-CCCc---EEE--------EEECC
Confidence 99999999999999999999999887643211 11222334456666653110 1111 122 22222
Q ss_pred cceeeee--eec------cCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 230 EHVIGKE--VDR------YTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 230 ~~~~~~~--~~~------~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
..+.... ... +.....+.+.+ +...+.+.|+|.|.|..|..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~ 401 (524)
T 2ec8_A 353 RTFTDKWEDYPKSENESNIRYVSELHLTR-LKGTEGGTYTFLVSNSDVNA 401 (524)
T ss_dssp CBCSSSBCCEESCCSSSCCEEEEEEEECS-CCGGGCEEEEEEEECSSCEE
T ss_pred eeccCCccceeEEccCCCceeEEEEEEee-cCcccCeEEEEEEEecCceE
Confidence 2111100 000 00123455655 89999999999999999864
No 49
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.93 E-value=5.2e-26 Score=218.23 Aligned_cols=258 Identities=17% Similarity=0.105 Sum_probs=167.2
Q ss_pred CCCCCceEEEEeeeCCC---------CCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCE-EEEEEEEcCCCCce
Q psy12061 1 YAGEGGNVTIFCNPEAA---------PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDE 70 (626)
Q Consensus 1 ~~~~G~~~~l~C~~~g~---------p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G-~Y~C~a~n~~g~~~ 70 (626)
+|.+|++++|.|.+.+. |.+.|.|+|++..+....++ ..+++|.|.+++.+|+| .|+|.|.|..|...
T Consensus 40 ~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~ 117 (329)
T 3oq3_B 40 MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCV 117 (329)
T ss_dssp EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETTEEEESSCCGGGGGCCEEEEEECTTSCEE
T ss_pred EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecceEEEcCCChHhCCCcEEEEEEeCCCcee
Confidence 36899999999999884 56799999999887654444 45789999999999999 99999999998755
Q ss_pred eeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccC-CcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeec
Q psy12061 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 71 ~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
....+.|...|+....++....+.+|++++|.|.+.+.| .| .+.|+|++..+.... .++...++.|.|.++
T Consensus 118 ~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~--~i~W~k~~~~l~~~~------~~~~~~~~~L~I~~v 189 (329)
T 3oq3_B 118 QGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYN--NITWYKNNQELIIDG------TKYSQSGQNLIIHNP 189 (329)
T ss_dssp EEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCC--EEEEEETTEECCCSS------SSEEEETTEEEECSC
T ss_pred eEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCc--eEEEEECCccCCCCC------ceEecCCCEEEEeec
Confidence 555445555443333333334467899999999999988 55 569999999985432 455555799999999
Q ss_pred CCCCCEeEEEEEEeC--CCceEE----EEEEEEeCCCCCCC----ceEEEEEeccceEEEEecCCCCCCcccEEEEEEee
Q psy12061 150 SFADAGEYECVVKST--VGKIST----KTTVIVEGPPGLPG----GVQVVEVHKTSATIQWTDGATNGRPITHYKIIART 219 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~--~g~~~~----~~~l~v~~~P~~p~----~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~ 219 (626)
+.+|+|.|+|.|.|. .|.... .+.|.|..+|.... ...........+.|.|........+. ...+.|..
T Consensus 190 ~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~-~i~v~W~~ 268 (329)
T 3oq3_B 190 ELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVD-DVLIDWEN 268 (329)
T ss_dssp CGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTT-CCEEEEEC
T ss_pred ChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCC-CcEEEEEE
Confidence 999999999999997 654433 37788887763211 01122223445566665322110000 01233332
Q ss_pred cCCCCceEeecceeeeeeecc-CCceeEEEEeeccCCceE-EEEEEEecCCccC
Q psy12061 220 NWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTY-EFKVIAGNELGYG 271 (626)
Q Consensus 220 ~~~~~w~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~y-~~~v~a~n~~g~~ 271 (626)
.+..-. .............. .....+.|.+ +...+.+ .|+|.|.|..|..
T Consensus 269 ~g~~i~-~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~~Y~C~a~N~~G~~ 320 (329)
T 3oq3_B 269 PSGWII-GLDFGVYSILTSSGGITEATLYFEN-VTEEYIGNTYTCRGHNYYFDK 320 (329)
T ss_dssp TTSCBC-CBCSSEEEEEEEETTEEEEEEEESS-CCGGGTTCEEEEEEECSSCEE
T ss_pred CCeeee-ccCCceeeeecccCceeEeEEEEEe-ccHHHCCCcEEEEEEecCCce
Confidence 221100 00000000000000 0123455544 8889999 9999999998854
No 50
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=1.7e-25 Score=196.83 Aligned_cols=170 Identities=30% Similarity=0.422 Sum_probs=142.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC-CCcEEEccCC-cEEEccCCCCCCEEEEEEEEcCCCC-ceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGM-DESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~-~~~~~~~~~g-~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+.. +.++.+..++ +|.|.+++.+|+|.|+|.+.|..|. ....+.|.|.
T Consensus 19 ~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 98 (192)
T 2iep_A 19 ALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK 98 (192)
T ss_dssp EETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEE
Confidence 56899999999999999999999999999875 5677776665 5999999999999999999999888 4556788888
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEE
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 158 (626)
.+|.+.. ++....+..|++++|.|.+.+.|.+ .+.|++++..+.... ......++.|.|.++..+|+|.|+
T Consensus 99 ~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~L~i~~~~~~d~G~Y~ 169 (192)
T 2iep_A 99 MKPKITR-PPINVKIIEGLKAVLPCTTMGNPKP--SVSWIKGDSALRENS------RIAVLESGSLRIHNVQKEDAGQYR 169 (192)
T ss_dssp EEEEEEE-CCCCEEEETTSCEEECCEEEEESCC--EEEEEETTEECCCCS------SEEECTTSCEEESSCCGGGCEEEE
T ss_pred eCCcccc-CCcceEEeCCCcEEEEEEEeccCCc--eEEEEeCCEEccCCC------cEEEecCCcEEEecCChhhCEEEE
Confidence 8777655 5678899999999999999999876 569999999987542 222335678999999999999999
Q ss_pred EEEEeCCCce-EEEEEEEEeCCC
Q psy12061 159 CVVKSTVGKI-STKTTVIVEGPP 180 (626)
Q Consensus 159 C~a~n~~g~~-~~~~~l~v~~~P 180 (626)
|.|.|..|.. +..+.|.|..+|
T Consensus 170 C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 170 CVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEcCCCcEEEEEEEEEEEeCC
Confidence 9999999987 557888888765
No 51
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.93 E-value=5.8e-25 Score=207.49 Aligned_cols=248 Identities=19% Similarity=0.272 Sum_probs=175.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe-CCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCce-eeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDE-SKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~ 76 (626)
+.+|++++|.|.+.|.|. .|.|+| +|..+..+.++.+..+| +|.|.+++.+|+|.|+|.|.|..|... ....|.
T Consensus 16 v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~ 94 (291)
T 2wim_A 16 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 94 (291)
T ss_dssp EETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEE
T ss_pred ecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEE
Confidence 568999999999999875 999999 88888888888887766 799999999999999999999988763 456788
Q ss_pred EEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCE
Q psy12061 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAG 155 (626)
Q Consensus 77 v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g 155 (626)
|..+|.+.. .+....+.+|++++|.|.+.+.|.+ .+.|++++..+.... ..++. ..++.|.|.+++..|+|
T Consensus 95 v~~~~~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~-----~~~~~~~~~~~L~i~~v~~~d~G 166 (291)
T 2wim_A 95 IYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEVTTIS-----DNRFAMLANNNLQILNINKSDEG 166 (291)
T ss_dssp EECCCBCCS-CCCSEEEETTSCEEECCCCBCSSCC--EEEEECC----CBCC-----CSSEEECTTSCEEETTCCGGGCE
T ss_pred ecCCcceEe-CCCChhhcCCCCEEEEEEEccCCCC--EEEEEECCccccccC-----CceEEEccCCCEEEEecchhhCE
Confidence 877776554 4667889999999999999998876 469999998876421 13333 35678999999999999
Q ss_pred eEEEEEEeCCCce--EEEEEEEEeCCCCCCCce---EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeec
Q psy12061 156 EYECVVKSTVGKI--STKTTVIVEGPPGLPGGV---QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSE 230 (626)
Q Consensus 156 ~Y~C~a~n~~g~~--~~~~~l~v~~~P~~p~~~---~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~ 230 (626)
.|+|.+.|..+.. ...+.+.+..+|...... .........+.|.|... +.+... +.|..++ .
T Consensus 167 ~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~--v~W~~~g--------~ 233 (291)
T 2wim_A 167 IYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS---GSPEPA--ISWFRNG--------K 233 (291)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCC---CBSCCE--EEEEETT--------E
T ss_pred EEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEee---cCCCCe--EEEEECC--------E
Confidence 9999999987543 456677777777543211 12223456677887753 222222 2332222 1
Q ss_pred ceeeee-eeccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 231 HVIGKE-VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 231 ~~~~~~-~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
.+.... .........+.+.+ +...+.+.|+|.|.|..|...
T Consensus 234 ~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~ 275 (291)
T 2wim_A 234 LIEENEKYILKGSNTELTVRN-IINSDGGPYVCRATNKAGEDE 275 (291)
T ss_dssp ECCCTTTEEECSTTCEEEEES-CCSTTCEEEEEEEEETTEEEE
T ss_pred ECcCCccEEEcCCccEEEEee-CCcccCEEEEEEEEECCCcee
Confidence 111000 00011233566766 999999999999999999664
No 52
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.93 E-value=6.6e-25 Score=207.13 Aligned_cols=249 Identities=20% Similarity=0.283 Sum_probs=169.3
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEe-CCEEccC-CCcEEEcc----CCcEEEccCCCCCCEEEEEEEEcCCCC-ceeeE
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKK-DGNIIGS-GGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHGM-DESKG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~-~~~~i~~-~~~~~~~~----~g~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~ 73 (626)
+.+|++++|.|.+.|.| .+.|.|+| ||..+.. ..++.+.. +++|.|.+++.+|+|.|+|.|.|..|. ....+
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~ 93 (291)
T 1qz1_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATV 93 (291)
T ss_dssp EETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEE
T ss_pred EeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEE
Confidence 56899999999999987 68999999 8888864 45666543 347999999999999999999999865 44567
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
.|.|..+|.+.. .|....+.+|++++|.|.+.+.|.| .+.|++++..+.... ........++.|.|.+++.+|
T Consensus 94 ~l~v~~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~----~~~~~~~~~~~L~i~~~~~~d 166 (291)
T 1qz1_A 94 NVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPP--TIIWKHKGRDVILKK----DVRFIVLSNNYLQIRGIKKTD 166 (291)
T ss_dssp EEEEECCSEEEE-CCSSEEEETTSCEEECCEEECSSCC--EEEEEETTSCSSTTC----CTTEEECTTSCEEETTCCGGG
T ss_pred EEEeeccccccC-CCCcccccCCCeEEEEEEeccCCCC--EEEEEECCEEcccCC----CceEEEccCCcEEEccCcccc
Confidence 888877766554 5778889999999999999999876 569999998875431 012223466799999999999
Q ss_pred CEeEEEEEEeCCCce--EEEEEEEEeCCCCCCC---ceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEe
Q psy12061 154 AGEYECVVKSTVGKI--STKTTVIVEGPPGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~--~~~~~l~v~~~P~~p~---~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~ 228 (626)
+|.|+|.|.|..+.. ...+.|.|..+|.... ...........+.|.|.... .+. ....|.+.
T Consensus 167 ~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g---~p~----------p~i~W~~~ 233 (291)
T 1qz1_A 167 EGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADG---FPE----------PTMSWTKD 233 (291)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEE---ESC----------CEEEEEET
T ss_pred CeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEE---eCC----------CcEEEEEC
Confidence 999999999976433 4556677765553211 11111223344555554211 111 11122222
Q ss_pred ecceeeee-----eeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 229 SEHVIGKE-----VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 229 ~~~~~~~~-----~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
+..+.... .........+.+.+ +...+.+.|+|.|.|..|..
T Consensus 234 g~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~ 280 (291)
T 1qz1_A 234 GEPIENEEEDDEKHIFSDDSSELTIRN-VDKNDEAEYVCIAENKAGEQ 280 (291)
T ss_dssp TEECCCC--CCSSEEECTTSCEEEECS-CCGGGCEEEEEEEEETTEEE
T ss_pred CEECcCCCCCCcceEEcCCCcEEEEEe-cChhcCEEEEEEEEeCCCce
Confidence 22111100 00001223466655 89999999999999999854
No 53
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.93 E-value=1.4e-25 Score=220.23 Aligned_cols=165 Identities=30% Similarity=0.541 Sum_probs=143.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe-CCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.|.+.|+| ++.++... ......+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 217 ~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~ 295 (384)
T 3kld_A 217 AEKGTTVKLECFALGNPVPTILWRRADGKPIARK-ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQ 295 (384)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT-CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred ecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc-ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecC
Confidence 4579999999999999999999999 55566443 333445678999999999999999999999999999999999888
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|.+.. .+.+..+..|+++.|.|.+.|.|.|. |.|+|||..+... .++...++.|.|.+++.+|+|.|+|.
T Consensus 296 P~~~~-~~~~~~v~~g~~v~l~C~~~g~P~p~--i~W~k~g~~l~~~-------~~~~~~~~~L~i~~v~~~D~G~Y~C~ 365 (384)
T 3kld_A 296 PNWVQ-IINDIHVAMEESVFWECKANGRPKPT--YRWLKNGDPLLTR-------DRIQIEQGTLNITIVNLSDAGMYQCV 365 (384)
T ss_dssp EEEEE-CCCCEEECTTCCEEEECEEEEESCCE--EEEEETTEECCCB-------TTEEEETTEEEESSCCGGGCEEEEEE
T ss_pred Ccccc-CCCceEecCCCCEEEEeECCccCCCe--EEEEECCEECCCC-------ccEEEeCCEEEEeecChhhCEEEEEE
Confidence 87765 46788999999999999999999874 5899999998653 45667788999999999999999999
Q ss_pred EEeCCCceEEEEEEEEe
Q psy12061 161 VKSTVGKISTKTTVIVE 177 (626)
Q Consensus 161 a~n~~g~~~~~~~l~v~ 177 (626)
|.|..|...+++.|.|.
T Consensus 366 A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 366 AENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEeCCceEEeceEEEEe
Confidence 99999999999999885
No 54
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.93 E-value=7.8e-25 Score=215.90 Aligned_cols=342 Identities=16% Similarity=0.203 Sum_probs=209.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe-CCEEccCC-CcEEEccCCcEEEccCCCCC------CEEEEEEEEcCCCCc-eee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSG-GRRKIFENGNLLISPVSRDD------SGIYSCTATNVHGMD-ESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~i~~~-~~~~~~~~g~L~i~~v~~~d------~G~Y~C~a~n~~g~~-~~~ 72 (626)
+.+|+.++|.|.+.|.|.|+|.|+| ||.++... ....+..+|+|.|.+++.+| +|.|+|.|.|..|.. ...
T Consensus 16 ~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~ 95 (388)
T 2v5m_A 16 FSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRD 95 (388)
T ss_dssp EETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCC
T ss_pred EEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecc
Confidence 4589999999999999999999999 88888643 33355678899999999987 999999999999874 346
Q ss_pred EEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCC-cceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCC
Q psy12061 73 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 151 (626)
Q Consensus 73 ~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 151 (626)
+.|.|..+|.+.. .+....+.+|++++|.|.+.+.+. +...+.|++++..+...... .........++.|.|.+++.
T Consensus 96 ~~v~v~~~p~~~~-~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~ 173 (388)
T 2v5m_A 96 VHVRAVVAQYYEA-DVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE-YDGKYLVLPSGELHIREVGP 173 (388)
T ss_dssp EEEEEECCCCCCC-BCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSC-BTTTEEECTTSCEEESSCCG
T ss_pred eEEEEcccccccc-CccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccC-CCCcEEEccCCcEEEecCCc
Confidence 7888877776655 466788999999999999988754 33578999998877532210 11122234567999999999
Q ss_pred CCC-EeEEEEEEeCCCceE-EE---EEEEEeCC-----CCCCC---ceEEEEEeccceEEEEecCCCCCCcccEEEEEEe
Q psy12061 152 ADA-GEYECVVKSTVGKIS-TK---TTVIVEGP-----PGLPG---GVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218 (626)
Q Consensus 152 ~d~-g~Y~C~a~n~~g~~~-~~---~~l~v~~~-----P~~p~---~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~ 218 (626)
+|+ |.|+|.+.|..+... .. ..|.|..+ |..|. ... .......+.|.|... +.+... +.|.
T Consensus 174 ~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~-~v~~G~~v~l~C~~~---g~p~p~--v~W~ 247 (388)
T 2v5m_A 174 EDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPL-ELMVAHTISLLCPAQ---GFPAPS--FRWY 247 (388)
T ss_dssp GGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCE-EEETTSCEEECCCCE---EESCCE--EEEE
T ss_pred cccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCce-EEeeCCcEEEEEECC---CCCCCE--EEEE
Confidence 999 999999999865432 21 35666654 21111 111 122345666666532 111111 2222
Q ss_pred ecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeec
Q psy12061 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGG 298 (626)
Q Consensus 219 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~ 298 (626)
..+...-....... ..... .....+.+.+ +...+.+.|+|.|.|..|........ .+..++. ....|....+..
T Consensus 248 ~~~~~~~~~~~~~~-~~~~~--~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~-~~~~~~~~~v~~ 321 (388)
T 2v5m_A 248 KFIEGTTRKQAVVL-NDRVK--QVSGTLIIKD-AVVEDSGKYLCVVNNSVGGESVETVL-TVTAPLS-AKIDPPTQTVDF 321 (388)
T ss_dssp EECTTSSCEEECCC-SSSEE--EETTEEEESS-CCGGGCEEEEEEEECSSCEEEEEEEE-EEEEEEE-EEEESSEEEECT
T ss_pred ecCCCCcccccccc-cCcee--cccCEEEECc-CCHHHCeEEEEEEecCCCceeEEEEE-EEeCCCc-cccCCCcEEecC
Confidence 21110000000000 00000 0112455555 89999999999999999864222111 1111110 011223333333
Q ss_pred CCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCC
Q psy12061 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376 (626)
Q Consensus 299 ~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~ 376 (626)
+ ..+.|..... +.. .. .+.|.+.+.. +. .....+.|.++.......|+|.|.|..|...
T Consensus 322 g--~~~~l~C~~~----g~p-~p--~i~W~~~g~~------i~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 380 (388)
T 2v5m_A 322 G--RPAVFTCQYT----GNP-IK--TVSWMKDGKA------IG----HSESVLRIESVKKEDKGMYQCFVRNDRESAE 380 (388)
T ss_dssp T--SCEEEEEEEE----EEC-CC--EEEEEETTEE------CS----CCSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred C--CCEEEEEEec----ccc-CC--eEEEEECCEE------Cc----cCCCEEEEecCChhhCEEEEEEEEcCCCcEE
Confidence 3 4556655541 111 11 5677766511 00 0123577888888888889999999988654
No 55
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.93 E-value=5.9e-25 Score=216.88 Aligned_cols=241 Identities=10% Similarity=0.026 Sum_probs=146.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC--CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN--GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~--g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
|.+|++++|.|.+.|.|.|.|.|++++..+....+...... .+|.|.+|+.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 60 V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 139 (423)
T 3qs7_E 60 VDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN 139 (423)
T ss_dssp ECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-
T ss_pred EecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEec
Confidence 57999999999999999999999999988754222111111 2599999999999999999999999888888998876
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 159 (626)
+|.+... ....+..|+.++|.|.+.|.|.|. |.|+|++..+..... .....+......| ...|+|.|+|
T Consensus 140 ~p~~~~~--~p~~~~~~~~~~L~C~a~G~P~P~--i~W~k~~~~~~~~~~--~~~~~~~~~~~~l-----~~~d~G~Y~C 208 (423)
T 3qs7_E 140 TLLYTLR--RPYFRKMENQDALVCISESVPEPI--VEWVLCDSQGESCKE--ESPAVVKKEEKVL-----HELFGTDIRC 208 (423)
T ss_dssp ----CEE--EEEEEECSSSSCEEEEEEESSCCE--EEEEEC---------------CEEECCSEE-----CCCCSSCEEE
T ss_pred Ccccccc--CCcEeccCCceEEEEEEeeecCCe--EEEEECCCCCccccc--cccccccccceEE-----ecccCeEEEE
Confidence 6654322 223456788999999999999885 589999876532110 0001111112222 5789999999
Q ss_pred EEEeCCCceEE-EEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee---
Q psy12061 160 VVKSTVGKIST-KTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK--- 235 (626)
Q Consensus 160 ~a~n~~g~~~~-~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~--- 235 (626)
.|.|..|.... .+.|.|..+|..|.. .........+.|.|........+ .|. |.+.+..+...
T Consensus 209 ~A~N~~G~~~~~~~~l~V~~~p~~~~~-~~~v~~G~~v~L~C~~~g~~p~p----~i~--------W~k~g~~l~~~~~~ 275 (423)
T 3qs7_E 209 CARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVHVNHGF----GLT--------WELENKALEEGNYF 275 (423)
T ss_dssp EEECSSCEEEEECEEEESSSCCCSSTT-EEEEETTSCEEEEEEEEESSSCC----CEE--------EEESSSBCCGGGEE
T ss_pred EEEcCCCCcceeeEEEEEecCCccCCC-ceEEeCCCeEEEEEEEEcCCCCc----EEE--------EEECCEEcccccee
Confidence 99999998654 367777766654322 22234455666666642111111 122 22222111000
Q ss_pred eeec------cCCceeEEEEeeccCCceEEEEEEEecC
Q psy12061 236 EVDR------YTGRKEASIENVLVPWSTYEFKVIAGNE 267 (626)
Q Consensus 236 ~~~~------~~~~~~~~i~~~l~~~~~y~~~v~a~n~ 267 (626)
.... ......+.|.+ +...+.+.|+|.|.|.
T Consensus 276 ~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 276 EMSTYSTNRTMIRILFAFVSS-VARNDTGYYTCSSSKH 312 (423)
T ss_dssp EEEEEETTTEEEEEEEEEESS-CCTTTCEEEEEEETTE
T ss_pred ecccccCCceeEEEEEEEEee-cCHHHCEEEEEEEecC
Confidence 0000 01112355555 8999999999999998
No 56
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.93 E-value=6.2e-25 Score=199.04 Aligned_cols=222 Identities=21% Similarity=0.293 Sum_probs=163.2
Q ss_pred CCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEE
Q psy12061 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365 (626)
Q Consensus 286 ~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~ 365 (626)
.|+.+|.++.+...+.+++.|+|+++ ++.+.+|.|+|+..+...+...... .....+.+.+|.|++.|.|+
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p-----~g~i~~Y~v~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP-----SGKPMGYRVKYWIQGDSESEAHLLD----SKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC-----SSCCCEEEEEEEETTSCGGGCEEEE----ESSSEEEECSCCTTCEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC-----CCccceEEEEEEECCCCccceEEEc----CCccEEEECCCCCCCEEEEE
Confidence 35678999999999999999999983 3578999999998764443322222 23456889999999999999
Q ss_pred EEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccc----
Q psy12061 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET---- 441 (626)
Q Consensus 366 v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~---- 441 (626)
|+|.|..|.|.+|....++|.+..|. +|.++++...+.+++.|+|++|... +|.+.+|.|+|+..+.....
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~~ 149 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQEVPS-EPGRLAFNVVSSTVTQLSWAEPAET----NGEITAYEVCYGLVNDDNRPIGPM 149 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCCCCCC-CCCCCEEEECSSSCEEEECCCCSCC----SSCCCEEEEEEEEBCTTSCBSSCC
T ss_pred EEEEeCCCcCCCCCeEEEEcCCCCCC-CCCccEEEEecCCEEEEEEcCCCCC----CCceeEEEEEEEECCCCCCccCcc
Confidence 99999999999999999999988887 6889999999999999999988643 37799999999877654321
Q ss_pred eEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCc-cEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCC
Q psy12061 442 AVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520 (626)
Q Consensus 442 ~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~-~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~ 520 (626)
............+.+.+|+|++.|.|+|+|.|..|.|++|. .+.++|.+..|+.+|....+. .+. .
T Consensus 150 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~~P~~~~~~-------i~~------~ 216 (234)
T 3f7q_A 150 KKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMSIPIIPDIP-------IVD------A 216 (234)
T ss_dssp EECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCCCCCCTTCC-------EEE------T
T ss_pred eEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCCCcccccee-------eEE------c
Confidence 11112233446799999999999999999999999999987 478899888887766433222 111 1
Q ss_pred CCCCceeeEEEEEE
Q psy12061 521 FEEEPIIGYKVRVW 534 (626)
Q Consensus 521 ~~~~~i~~Y~i~~~ 534 (626)
..+..+++|.++++
T Consensus 217 ~~g~~~~~~~~~~~ 230 (234)
T 3f7q_A 217 QSGEDYDSFLMYSD 230 (234)
T ss_dssp TC------------
T ss_pred ccCcchheeeeehh
Confidence 24567778888643
No 57
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.93 E-value=1.2e-25 Score=200.69 Aligned_cols=179 Identities=20% Similarity=0.207 Sum_probs=133.0
Q ss_pred CCCC--ceEEEEeeeCCCCCCeeEEEe---CCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceee-EEE
Q psy12061 2 AGEG--GNVTIFCNPEAAPKPKFVWKK---DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRL 75 (626)
Q Consensus 2 ~~~G--~~~~l~C~~~g~p~p~i~W~~---~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l 75 (626)
+.+| ++++|.|.+.+ |.+.+.|+| ||..+..+.++....++.|.|.+++.+|+|.|+|.|.|..+...+. ..|
T Consensus 19 v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l 97 (213)
T 2x1w_L 19 ITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIV 97 (213)
T ss_dssp ECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEE
T ss_pred EecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEE
Confidence 5789 99999999987 789999988 4777776666666666789999999999999999999965543333 566
Q ss_pred EEEe--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC-C-ccCCCe---eEecCCeEEEee
Q psy12061 76 IVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-N-ELETPN---INIDGGLLEITN 148 (626)
Q Consensus 76 ~v~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~-~-~~~~~~---~~~~~~~l~i~~ 148 (626)
.|.. +|.+...++..+.+.+|++++|.|.+.+.|.+.+++.|+++|..+..... . .....+ .....+.|.|.+
T Consensus 98 ~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 177 (213)
T 2x1w_L 98 VVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDG 177 (213)
T ss_dssp EECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESS
T ss_pred EEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECC
Confidence 6643 34455556666799999999999999997766667899999886432110 0 000000 012345799999
Q ss_pred cCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 149 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 149 ~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
++.+|+|.|+|.|.|..|..+..+.|.|..+|.
T Consensus 178 v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 178 VTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred CCcccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 999999999999999999999999999988763
No 58
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.93 E-value=2.9e-25 Score=220.37 Aligned_cols=342 Identities=16% Similarity=0.208 Sum_probs=211.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC--CCcEEEc-cCCcEEEc----cCCCCCCEEEEEEEEcCCCCce-eeE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS--GGRRKIF-ENGNLLIS----PVSRDDSGIYSCTATNVHGMDE-SKG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~--~~~~~~~-~~g~L~i~----~v~~~d~G~Y~C~a~n~~g~~~-~~~ 73 (626)
+.+|++++|.|.+.|.|.|+|.|+|||..+.. +.++.+. .+++|.|. +++.+|+|.|+|.|.|..|... ..+
T Consensus 29 v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~ 108 (404)
T 3p3y_A 29 VDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRI 108 (404)
T ss_dssp ECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEE
T ss_pred EcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeE
Confidence 56899999999999999999999999998853 3344333 45677775 8889999999999999998864 567
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCCeEEEeecCC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASF 151 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~ 151 (626)
.|.|..+|.+....+....+.+|++++|.|.+ .+.|.+ .+.|++++....... .+.. ..++.|.|.+++.
T Consensus 109 ~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~~l~i~~v~~ 180 (404)
T 3p3y_A 109 RLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSP--VIFWMSSSMEPITQD------KRVSQGHNGDLYFSNVML 180 (404)
T ss_dssp EEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCC--EEEEECTTSCBCCCC------SSEEECTTSCEEESSCCS
T ss_pred EEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCC--eEEEeCCCccccCCC------CcEEEcCCCcEEEEeeee
Confidence 88888888776666677899999999999999 667665 569999875443321 2333 3577899999999
Q ss_pred CC-CEeEEEEEEeCCCceEE---EEEEEEeCCCC----CCC------c-eEEEEEeccceEEEEecCCCCCCcccEEEEE
Q psy12061 152 AD-AGEYECVVKSTVGKIST---KTTVIVEGPPG----LPG------G-VQVVEVHKTSATIQWTDGATNGRPITHYKII 216 (626)
Q Consensus 152 ~d-~g~Y~C~a~n~~g~~~~---~~~l~v~~~P~----~p~------~-~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~ 216 (626)
.| +|.|+|.+.|..|.... ...+.+...+. +|. . -.........+.|.|... +.+.. .+.
T Consensus 181 ~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~---g~p~~--~v~ 255 (404)
T 3p3y_A 181 QDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIAS---GVPTP--DIA 255 (404)
T ss_dssp GGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBC---CSSCC--EEE
T ss_pred ccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEEC---CCCCC--cEE
Confidence 99 59999999998886432 34555543221 111 1 122334556788888643 22222 233
Q ss_pred EeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEe
Q psy12061 217 ARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGG 296 (626)
Q Consensus 217 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~ 296 (626)
|...+ ..+.............+.+.+ +...+.+.|+|.|.|..|........ .+...+.. ...|.+..+
T Consensus 256 W~~~~--------~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l-~V~~~p~~-~~~~~~~~v 324 (404)
T 3p3y_A 256 WYKKG--------GDLPSDKAKFENFNKALRITN-VSEEDSGEYFCLASNKMGSIRHTISV-RVKAAPYW-LDEPKNLIL 324 (404)
T ss_dssp EEETT--------BCCCTTTEEEEGGGTEEEESS-CCGGGCEEEEEEEECSSCEEEEEEEE-EEEEEEEE-EECCCCEEE
T ss_pred EEECC--------EECCCCcccccccCceEEEcc-CCHhHCEEEEEEEEeCCCcEEEEEEE-EEeCCCee-eccCCccee
Confidence 33322 211110000001123456655 89999999999999998854322111 11111100 112333444
Q ss_pred ecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCC
Q psy12061 297 GGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376 (626)
Q Consensus 297 ~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~ 376 (626)
..+ ..+.|..... +.... .+.|...+........ ..........+.+.++.......|+|.|.|..|...
T Consensus 325 ~~g--~~~~l~C~~~----g~p~p---~v~W~~~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 394 (404)
T 3p3y_A 325 APG--EDGRLVCRAN----GNPKP---TVQWMVNGEPLQSAPP-NPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL 394 (404)
T ss_dssp CTT--CCEEEECEEE----EESCC---EEEEEETTEEGGGSCC-CTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEE
T ss_pred ecC--CcEEEEEEcc----ccCCC---ceEEEECCEecCCCCC-CceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEE
Confidence 333 3455555441 11111 4677766511100000 000000112567888887777889999999988754
Q ss_pred C
Q psy12061 377 E 377 (626)
Q Consensus 377 ~ 377 (626)
.
T Consensus 395 ~ 395 (404)
T 3p3y_A 395 A 395 (404)
T ss_dssp E
T ss_pred E
Confidence 3
No 59
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=4.2e-25 Score=195.19 Aligned_cols=168 Identities=23% Similarity=0.379 Sum_probs=144.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.+.+.|+|++..+....++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 19 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~ 98 (197)
T 3lcy_A 19 TKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQ 98 (197)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEE
Confidence 568999999999999999999999999999888888887777 79999999999999999999999998888999998
Q ss_pred eCCceeee--CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--c--CCeEEEeecCC-
Q psy12061 79 HGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--D--GGLLEITNASF- 151 (626)
Q Consensus 79 ~~p~~~~~--~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~--~~~l~i~~~~~- 151 (626)
.+|.+... .+....+..|+.+.|.|.+.+.|.| .+.|++++..+.... ++.. . ...|.|.++..
T Consensus 99 ~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~~~~~-------~~~~~~~~~~~~L~i~~~~~~ 169 (197)
T 3lcy_A 99 ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP--AMTWFHGQKLLQNSE-------NITIENTEHYTHLVMKNVQRK 169 (197)
T ss_dssp EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCC--EEEEEETTEECCCCS-------SEEEEECSSEEEEEESSCCHH
T ss_pred cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCC--eeEEeECCEECCCCC-------ceEEEEcCCEEEEEEccccch
Confidence 87766543 2456788999999999999999887 468999999987542 2222 1 26899999985
Q ss_pred CCCEeEEEEEEeCCCceEEEEEEEEeC
Q psy12061 152 ADAGEYECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 152 ~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 170 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 170 THAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp HHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred hhCceEEEEEEcCcCceEEEEEEEEec
Confidence 899999999999999999999998865
No 60
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.93 E-value=6e-25 Score=216.38 Aligned_cols=277 Identities=14% Similarity=0.129 Sum_probs=198.6
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|..+...|++..+..|++++|.|.+. . + .|.|++||..+... ++....+.|+|.+++..|.|.|.|.
T Consensus 203 ~t~i~v~P~~~~v~~Gs~vtl~C~a~-~--~--~I~W~~ng~~i~~~--------ri~~~~~~L~I~nl~~sd~g~y~~~ 269 (488)
T 2q7n_A 203 NTETNVFPQDKVVLAGSNMTICCMSP-T--K--VLSGQIGNTLRPLI--------HLYGQTVAIHILNIPVSENSGTNII 269 (488)
T ss_dssp CSSCCEECTTCEEESSCCCEEEECCS-S--C--EEEEEETTEECCCE--------ECSSSCEEEECCSCCCCCSSCEEEE
T ss_pred CCceEECCCCCEEcCCCCEEEEEECC-C--C--EEEEEECCEECchh--------hccceEEEEEEeCCCcccCCcEEEE
Confidence 33344567888899999999999998 2 3 56899999887543 2223456899999999999998887
Q ss_pred EEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCC---CcccEEEEEEeecCCC-CceEeecceeeee
Q psy12061 161 VKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG---RPITHYKIIARTNWNS-TWFNVSEHVIGKE 236 (626)
Q Consensus 161 a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~---~~~~~y~v~~~~~~~~-~w~~~~~~~~~~~ 236 (626)
+.+ +.....+.+.+..+|.+|.++.|......++.++|+++.+.+ .+...|.|.++..+.. .|.....
T Consensus 270 C~~--~~~i~~~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~~------ 341 (488)
T 2q7n_A 270 FIT--DDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSAVFHRIEG------ 341 (488)
T ss_dssp EEE--SSCEEEEEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEEEEECSSC------
T ss_pred EEc--CCeEEEEEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCCCCccccc------
Confidence 773 333558899999999999999998888899999999986652 4678999998754321 2221110
Q ss_pred eeccCCceeEEEEeeccC-CceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCC
Q psy12061 237 VDRYTGRKEASIENVLVP-WSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREK 315 (626)
Q Consensus 237 ~~~~~~~~~~~i~~~l~~-~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~ 315 (626)
.......+.+ . +.+ .+.|.|+|.|.|..|... + . ..+.+....++.+|.++.+...+.+++.|+|+++ ..
T Consensus 342 --~~~~~~~ct~-~-l~~~~t~Y~f~V~A~N~~G~~~-S-~-~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP--~~ 412 (488)
T 2q7n_A 342 --LTNETYRLGV-Q-MHPGQEIHNFTLTGRNPLGQAQ-S-A-VVINVTERVAPHDPTSLKVKDINSTVVTFSWYLP--GN 412 (488)
T ss_dssp --CCSSCEEEEE-E-CCSSCCCCEEEEEEEETTEEEE-E-E-EECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEE--EE
T ss_pred --cCCceEEEEE-c-CCCCccEEEEEEEEEeCCCCcc-c-e-EEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCC--CC
Confidence 0012233444 3 555 599999999999999843 3 2 2333344456689999999888889999999994 33
Q ss_pred cccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCC---CCCCccEEEEccCC
Q psy12061 316 QNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIFSAED 388 (626)
Q Consensus 316 ~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~---~~~s~~~~~~t~~~ 388 (626)
.++.+..|.|+|+..+...|...............+.+.+|.|++.|.|+|+|.+ .|. |+||..+.++|.++
T Consensus 413 ~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 413 FTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp CSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred CCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence 4567899999999887665632111111112334458999999999999999999 887 57777667766543
No 61
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=3.8e-25 Score=197.60 Aligned_cols=173 Identities=25% Similarity=0.443 Sum_probs=135.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc-c---CCcEEEccCC-CCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-E---NGNLLISPVS-RDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~-~---~g~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+....+. . +..|.|.+++ .+|+|.|+|.|.|..|.....+.|.
T Consensus 18 v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 97 (212)
T 2yd6_A 18 GVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLT 97 (212)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEE
Confidence 568999999999999999999999999999755433322 1 2259999995 9999999999999999988888999
Q ss_pred EEeCC------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEE
Q psy12061 77 VLHGP------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEI 146 (626)
Q Consensus 77 v~~~p------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i 146 (626)
|...+ +.+...|....+..|++++|.|.+.+.|.| .+.|+++|..+..... ..++.. ..+.|.|
T Consensus 98 V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~v~W~~~g~~l~~~~~----~~~~~~~~~~~~~~L~i 171 (212)
T 2yd6_A 98 VLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDP--EITWFKDFLPVDTSNN----NGRIKQLRSESIGALQI 171 (212)
T ss_dssp EECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEEC----------CCEEEEEETTEEEEEE
T ss_pred EeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCC--eEEEEECCccccCcCC----CceEEEEecCCeEEEEE
Confidence 98742 223345677889999999999999999876 4699999999875410 122222 2478999
Q ss_pred eecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCC
Q psy12061 147 TNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180 (626)
Q Consensus 147 ~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P 180 (626)
.+++.+|+|.|+|.|.|..|.. +..+.|.+..+|
T Consensus 172 ~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 172 EQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred cCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 9999999999999999999986 456788877655
No 62
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=8.6e-25 Score=191.66 Aligned_cols=165 Identities=22% Similarity=0.305 Sum_probs=137.2
Q ss_pred CC-CceEEEEeeeCCCCC--CeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 3 GE-GGNVTIFCNPEAAPK--PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 3 ~~-G~~~~l~C~~~g~p~--p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
.+ |++++|.|.+.+.|. +.+.|+|+|..+..+.+.. .++.|.|.+++.+|+|.|+|.|.|. |.....+.|.|..
T Consensus 15 ~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~ 91 (190)
T 2wv3_A 15 RDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA--SNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKA 91 (190)
T ss_dssp CCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC--SEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEEC
T ss_pred ccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe--ccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEec
Confidence 34 999999999999887 7999999999997654332 4568999999999999999999999 8888889999988
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee--CCEEeccccCCccCCCeeEec----CCeEEEeecC-CC
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH--NGVRIGNMDLNELETPNINID----GGLLEITNAS-FA 152 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~--~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~-~~ 152 (626)
+|.+... +....+..|++++|.|.+.+.|.| .+.|++ +|..+.... ...++... .+.|.|.+++ .+
T Consensus 92 ~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~~~g~~~~~~~----~~~~~~~~~~~~~~~L~i~~~~~~~ 164 (190)
T 2wv3_A 92 APDITGH-KRSENKNEGQDAMMYCKSVGYPHP--EWMWRKKENGVFEEISN----SSGRFFIINKENYTELNIVNLQITE 164 (190)
T ss_dssp CCEEEEE-CSEEEEETTSCEEEEEEEECSSCC--EEEEEEEETTEEEECCC----TTSCEEEEECSSEEEEEECSCCTTT
T ss_pred CCccccc-CCcceeeCCCcEEEEEEeCccCCC--ceEEEEcCCCceeeeec----CCCeEEEecCCCeeEEEEEeccccC
Confidence 8877654 677889999999999999999887 568999 788775321 11333332 1379999999 79
Q ss_pred CCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 153 DAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|+|.|+|.|.|..|..+..+.|.|.
T Consensus 165 d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 165 DPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCEEEEEEEEecCCcceeEEEEEEE
Confidence 9999999999999999999988875
No 63
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.93 E-value=4.9e-24 Score=197.75 Aligned_cols=231 Identities=18% Similarity=0.158 Sum_probs=167.9
Q ss_pred CCCCceEEEEeeeCCCCCC-eeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.+.|.+ .|.|+|+|..+... +++|.|.+++.+|+|.|+|.|.|..+. ..+.|.|..+
T Consensus 13 v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~-------~~~l~i~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v~~~ 83 (262)
T 3rjd_A 13 VFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS-------TPSYRITSASVNDSGEYRCQRGLSGRS--DPIQLEIHRG 83 (262)
T ss_dssp EETTCCEEEEEECSSCCCTTCEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEESSSCCC--CCEEEEEECS
T ss_pred eeCCCeEEEEEECCCCCCCceEEEEECCEEeecc-------CCeEEEecCCcccCeEEEEEEecCCcc--ccEEEEEecc
Confidence 5689999999999999988 99999999998643 467999999999999999999986654 4577777766
Q ss_pred CceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 159 (626)
|.... +....+.+|++++|.|.+ .+.|.+ .+.|+++|..+... ..++.|.|.+++.+|+|.|+|
T Consensus 84 ~~~~~--~~~~~~~~g~~v~l~C~~~~~~p~~--~v~W~~~g~~~~~~-----------~~~~~l~i~~~~~~d~G~Y~C 148 (262)
T 3rjd_A 84 WLLLQ--VSSRVFTEGEPLALRCHAWKDKLVY--NVLYYRNGKAFKFF-----------HWNSNLTILKTNISHNGTYHC 148 (262)
T ss_dssp SEEEE--ESCSEEETTSCEEEEEEEGGGCCCE--EEEEEETTEEEEEE-----------EECCCEEESSCCGGGCEEEEE
T ss_pred ceEec--CCCeEEecCCeEEEEEEccCCCCCc--eEEEEECCcccccc-----------CCCCeEEEEECChhhCEEEEE
Confidence 54433 445678899999999999 555544 66999999988542 146789999999999999999
Q ss_pred EEEeCCCceEEEEEEEEeCCCCCCCceEE----EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee
Q psy12061 160 VVKSTVGKISTKTTVIVEGPPGLPGGVQV----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235 (626)
Q Consensus 160 ~a~n~~g~~~~~~~l~v~~~P~~p~~~~~----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~ 235 (626)
.+.|..+..+..+.|.|..++.+|. +.. .......+.|.|........+...+.+.+. +....+...
T Consensus 149 ~~~n~~~~~~~~~~l~V~~~~~~p~-~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~--------~~~~~~~~~ 219 (262)
T 3rjd_A 149 SGMGKHRYTSAGISVTVKELFPAPV-LNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY--------MGSKTLRGR 219 (262)
T ss_dssp EEESSSEEEEECEEEEEECSSCCCE-EEESSCSSEETTCCEEEEEECCCCCC-----EEEEEE--------ETTEEEEEE
T ss_pred EEeCCCCccccceEEEeccCCCCCe-EeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEE--------eCCcEeccc
Confidence 9999998888889999987654442 111 123456788888854322112223333333 222221110
Q ss_pred eeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 236 EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 236 ~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.....+.+.+ +...+.+.|+|.|.|..|..
T Consensus 220 -----~~~~~L~i~~-v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 -----NTSSEYQILT-ARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -----ESCCEEEESS-CCGGGCEEEEEEEEETTSSC
T ss_pred -----CCCceEEEEE-echhhCeEEEEEEEcccCce
Confidence 1223455655 89999999999999999853
No 64
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.93 E-value=4.5e-25 Score=197.51 Aligned_cols=169 Identities=22% Similarity=0.296 Sum_probs=136.8
Q ss_pred CCceEEEEeeeCCC-CCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 4 EGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 4 ~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
+|+.+.|.|.+.|. |.|.|.|+|+|..|..+.++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~ 95 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQA 95 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEee
Confidence 35556666666664 68899999999999988888876655 399999999999999999999888877777776542
Q ss_pred --------------------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe
Q psy12061 80 --------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 139 (626)
Q Consensus 80 --------------------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 139 (626)
.|.+....|....+..|++++|.|.+.+.|.|. +.|+|++..+.... ...+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~-----~~~~~~ 168 (212)
T 2r15_A 96 YDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE--VSWLKNEKALAQTD-----HCNLKF 168 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCE--EEEEETTEEECCCS-----SEEEEE
T ss_pred ccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCce--EEEEECCeECccCC-----CEEEEE
Confidence 566666667788999999999999999998874 68999999997642 112222
Q ss_pred c---CCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCC
Q psy12061 140 D---GGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 140 ~---~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
. ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 169 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 169 EAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp ETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 2 238999999999999999999999999999999988743
No 65
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.93 E-value=4e-24 Score=189.60 Aligned_cols=197 Identities=18% Similarity=0.270 Sum_probs=157.6
Q ss_pred CCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC-CCcceeeeeeeecceeeEEEEeCCCcceeEEEEE
Q psy12061 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365 (626)
Q Consensus 287 p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~ 365 (626)
++.+|.++.+.. +.+++.|+|++ +.+.++++.+|.|+|+... ...|.........+ ...+.+ +|.|++.|.|+
T Consensus 5 ~P~~P~~~~~~~-~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~--~~~~~~-~L~p~t~Y~~~ 78 (205)
T 1cfb_A 5 VPNAPKLTGITC-QADKAEIHWEQ--QGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT--DSSFVV-QMSPWANYTFR 78 (205)
T ss_dssp CCCCCEEEEEEE-CSSEEEEEEEC--CCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETT--CSEEEE-ECCSSEEEEEE
T ss_pred CCCCCCCcEEEe-cCCEEEEEEEC--cccCCCceEEEEEEEecCCCCCCceeeeeccCCC--ceEEEE-eCCCCCEEEEE
Confidence 346889999988 99999999998 4567788999999998765 46676443332222 224456 89999999999
Q ss_pred EEEecCCCCCCCC-ccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEE
Q psy12061 366 VQAINDVGPGPES-EVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444 (626)
Q Consensus 366 v~a~n~~g~~~~s-~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~ 444 (626)
|+|.|..|.|.+| ....++|.+..|..+|.++++...+.+++.|+|++|..... +|.+.+|.|+|+..+........
T Consensus 79 V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~--ng~i~~Y~v~~~~~~~~~~~~~~ 156 (205)
T 1cfb_A 79 VIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEH--NAPNFHYYVSWKRDIPAAAWENN 156 (205)
T ss_dssp EEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGT--CSSSCEEEEEEEESSTTCCCEEE
T ss_pred EEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCcccc--CCCceEEEEEEEECCCCCCcEEE
Confidence 9999999999988 56788888888887899999999899999999999874322 37799999999887765423333
Q ss_pred EEecCccceEEEeCCccCceEEEEEEEeeCCCCCCC-CccEEEeecCC
Q psy12061 445 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPE-SERYLERTYRK 491 (626)
Q Consensus 445 ~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~-s~~~~~~t~~~ 491 (626)
.........+.+.+|.|++.|.|+|+|.|..|.|++ |..+.++|.++
T Consensus 157 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~ 204 (205)
T 1cfb_A 157 NIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 204 (205)
T ss_dssp EECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred EecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence 333335677999999999999999999999999995 78888888765
No 66
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.93 E-value=1.9e-24 Score=192.33 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=148.2
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccce-eeEEEEEEEEecCCCccceEEEEe--cCccceEEEeCCccCc
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEETAVYYLS--RTTRNWALIVGLQPDT 463 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t 463 (626)
.+.|. +|.++++...+. ++.|+|++|...+ | .+.+|.|+|+..+...+....... ......+.+.+|+|++
T Consensus 6 ~~~P~-~P~~~~~~~~~~-s~~l~W~~p~~~~----g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 6 ADTPS-SPSIDQVEPYSS-TAQVQFDEPEATG----GVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCCC-CCEEEEEEECSS-CEEEEEECCSCCC----SSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTC
T ss_pred cCCCc-CCcccEeeeccC-eEEEEEcCCCcCC----CcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCC
Confidence 44565 789999988777 6899999985432 4 389999999877665544332221 1234569999999999
Q ss_pred eEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccc
Q psy12061 464 KYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA 543 (626)
Q Consensus 464 ~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~ 543 (626)
.|.|+|+|.|..|.|++|....+.|....++.+|.++.+...+.+++.|+|+ +|.+.++.|.+|.|+|+..+..+
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~--~p~~~~~~i~~Y~v~~~~~~~~~--- 154 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLI--KQDDGGSPIRHYLVRYRALSSEW--- 154 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEE--CCCCTTSCCCEEEEEEEETTSCC---
T ss_pred eEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEE--CcccCCCCCceEEEEEECCCCCC---
Confidence 9999999999999999999888888876344578788888889999999999 56778899999999988722221
Q ss_pred cceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCC
Q psy12061 544 NDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP 585 (626)
Q Consensus 544 ~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~ 585 (626)
..........+++.+.+|.|++.|.|+|+|+|..|.|++|++
T Consensus 155 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 196 (209)
T 2vkw_A 155 KPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHF 196 (209)
T ss_dssp CCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEE
T ss_pred ceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchh
Confidence 122344567789999999999999999999999999999964
No 67
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.93 E-value=5e-25 Score=223.29 Aligned_cols=189 Identities=12% Similarity=0.170 Sum_probs=145.7
Q ss_pred CCCCceEEEEeeeC-CCCCCeeEEEeCCEEccCCCcEE---------EccCCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 2 AGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRK---------IFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~i~~~~~~~---------~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+.+|++++|.|.+. |.|.|.|.|+|+|..+....++. ....++|.|.+++.+|+|.|+|.|.|. ...
T Consensus 239 v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~ 315 (527)
T 3qs9_E 239 LKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQ 315 (527)
T ss_dssp ECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEE
T ss_pred EeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCc
Confidence 56899999999996 99999999999999886543322 122346999999999999999999998 667
Q ss_pred eEEEEEEeCCceeeeC-CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecC
Q psy12061 72 KGRLIVLHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 150 (626)
.+.|.|..+|.+...+ .....+.+|+++.|.|.+.+.|.|. |.|+|||..+.... +....+..|.|.+++
T Consensus 316 ~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~--i~W~k~g~~l~~~~-------~~~~~~~~L~I~~v~ 386 (527)
T 3qs9_E 316 SALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIR--CTWTFSRKSFPCEQ-------KGLDNGYSISKFCNH 386 (527)
T ss_dssp EEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCE--EEEEETTEEEECBC-------CBCSSSSEEEEECCC
T ss_pred eEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCE--EEEEECCEECcCCc-------ccccCCcEEEEecCC
Confidence 7889998777654333 2356788999999999999999874 69999999996542 223366789999999
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeCCCCC---C--CceEEEEEeccceEEEEec
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGL---P--GGVQVVEVHKTSATIQWTD 202 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~---p--~~~~~~~~~~~~~~l~W~~ 202 (626)
.+|+|.|+|.|.|..|..+..+.|.|..+|.. + ..+.|...+.....+.|..
T Consensus 387 ~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~~~l~C~a~g~P~p~i~W~~ 443 (527)
T 3qs9_E 387 KHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKK 443 (527)
T ss_dssp TTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCCE---EEEECSSCCEEEEEC
T ss_pred cccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCCCEEEEEEEEEcCCeEEEEE
Confidence 99999999999999999999999999987742 1 2345555566666777764
No 68
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.93 E-value=4.4e-24 Score=190.28 Aligned_cols=199 Identities=23% Similarity=0.261 Sum_probs=158.1
Q ss_pred CCCCCCCceeEeecCCcCeEEEEEeeCC--CCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEE
Q psy12061 285 DKPYQAPSRIGGGGGKIGDLSISWEPLP--REKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEY 362 (626)
Q Consensus 285 ~~p~~~p~~~~~~~~~~~~v~l~W~~~~--~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y 362 (626)
+.|+.+|.++.+...+.+++.|+|+++. ....++.+.+|.|+|+..+...+..... +.....+.+.+|.|++.|
T Consensus 2 d~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y 77 (211)
T 3p4l_A 2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA----NATTLSYLVTGLKPNTLY 77 (211)
T ss_dssp -CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE----EESSSEEEECSCCTTCEE
T ss_pred CCCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe----CCCceEEEecCcCCCCEE
Confidence 4577899999999999999999999842 2233678999999999876444332222 223456889999999999
Q ss_pred EEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEee--ecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc
Q psy12061 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF--NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE 440 (626)
Q Consensus 363 ~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~--~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~ 440 (626)
.|+|+|.|..|.|.+|....+.|.+..|..+|.++++... +.+++.|+|++|... +|.+.+|.|+|+.......
T Consensus 78 ~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~ 153 (211)
T 3p4l_A 78 EFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEA----NGKITGYIIYYSTDVNAEI 153 (211)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTC----CSCCCEEEEEEESCTTSCG
T ss_pred EEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCC----CCCEEEEEEEEEECCCCCC
Confidence 9999999999999999999999999989878999999877 578999999998643 3779999999987665433
Q ss_pred ce-EEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCC
Q psy12061 441 TA-VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK 491 (626)
Q Consensus 441 ~~-~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~ 491 (626)
.. ...........+.+.+|.|++.|.|+|+|.|..|.|++|..+.+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~ 205 (211)
T 3p4l_A 154 HDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205 (211)
T ss_dssp GGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred CceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence 21 2223345667799999999999999999999999999999999888753
No 69
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.93 E-value=2.3e-24 Score=189.55 Aligned_cols=170 Identities=24% Similarity=0.462 Sum_probs=141.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC-cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG-NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g-~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.+.+.|+|+|..+....++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 95 (192)
T 2va4_A 16 AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQ 95 (192)
T ss_dssp TTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEcc
Confidence 578999999999999999999999999999888887776544 6999999999999999999999998888889999888
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEEeccccCCccCCCeeEe----cCCeEEEeecCCCCC
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGNMDLNELETPNINI----DGGLLEITNASFADA 154 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~ 154 (626)
|.+... ....+..|++++|.|.+.+.|.|. +.|+++ +..+....... ..++.. ..+.|.|.+++.+|+
T Consensus 96 p~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~--v~W~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~ 169 (192)
T 2va4_A 96 PHIIQL--KNETTYENGQVTLVCDAEGEPIPE--ITWKRAVDGFTFTEGDKSL--DGRIEVKGQHGSSSLHIKDVKLSDS 169 (192)
T ss_dssp EEEEEE--CCEEECTTSEEEEEEEEEEESCCE--EEEEETTTTEEECTTCBCT--TSCEEEEEETTEEEEEEESCCGGGC
T ss_pred Cccccc--CcceEEeCCeEEEEEEecCCCCCc--EEEEeCCCCceeecccccc--CCcEEEeeccCceEEEEecCCcccC
Confidence 876653 345778899999999999998764 689998 66665432111 123332 236899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEe
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|.|+|.|.|..|..+.++.|.|+
T Consensus 170 G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 170 GRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEEEEecCCceEEEEEEEeC
Confidence 99999999999999988888874
No 70
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.93 E-value=1.6e-23 Score=198.87 Aligned_cols=276 Identities=13% Similarity=0.100 Sum_probs=179.3
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a 368 (626)
.+|.++.+.....+++.|+|+++ ....++...+|.+.|.. .|.... . . .. +.+.+|.++..|.|+|+|
T Consensus 5 ~pP~nl~~~~~~~~~v~l~W~pP-~~~~~~~~~~Y~v~~~~----~~~~~~-~--~--~~--~~~~~~~~~~~y~~~V~a 72 (314)
T 3bpo_C 5 PPVTNLSVSVENLCTVIWTWNPP-EGASSNCSLWYFSHFGD----KQDKKI-A--P--ET--RRSIEVPLNERICLQVGS 72 (314)
T ss_dssp CCCEEEEEEEETTTEEEEEEECC-SSCCCSSCCCEEECCC------CCCEE-E--S--SS--EEEEECCCSSCEEEEEEE
T ss_pred CCCcceEEEeCCceEEEEEEcCC-CCCCCCceEEEEEEecc----cCceEe-c--c--cc--EEEEEEcCCCcEEEEEEE
Confidence 58899999888889999999993 33335677889988743 222111 1 1 11 233557788999999999
Q ss_pred ec-CCCCCCCCccEEEE--ccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceE-E
Q psy12061 369 IN-DVGPGPESEVVTIF--SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV-Y 444 (626)
Q Consensus 369 ~n-~~g~~~~s~~~~~~--t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~-~ 444 (626)
.. ..|.|..+..+... +.+..|+.+|.++.+...+.+++.++|+++... +.+.+|.|+|+..+....... .
T Consensus 73 ~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-----~~~~~Y~l~y~~~~~~~~~~C~~ 147 (314)
T 3bpo_C 73 QCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-----SPDTNYTLYYWHRSLEKIHQCEN 147 (314)
T ss_dssp CC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC--------CCCCEEEEEEESSCSSCEECCC
T ss_pred EecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-----CCCccEEEEEEeCCCCccccCcC
Confidence 64 56666667766532 456677778999999988899999999988643 347789999987643321111 0
Q ss_pred EEecCccceEEEeCCc----cCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCC
Q psy12061 445 YLSRTTRNWALIVGLQ----PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS 520 (626)
Q Consensus 445 ~~~~~~~~~~~i~~L~----p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~ 520 (626)
...........+..+. .++.|.|+|.|.|..|.+..+ ...+.+...+.+.||.++++. ...+++.|+|++ |.
T Consensus 148 ~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~--P~ 223 (314)
T 3bpo_C 148 IFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWEN--PQ 223 (314)
T ss_dssp EEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEECSSSSEECCCCEEEEEE-EETTEEEEEEEC--CT
T ss_pred eecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEEehhheEeeCCCCEEEEE-EcCCcEEEEEeC--CC
Confidence 1112233456677665 378999999999998887644 355655555555699999987 778899999994 44
Q ss_pred CCCCceeeEEEEEEEeccCCccccce---------e-eecCccceEEecCCCCCceEEEEEEEEec------CC-CCCCC
Q psy12061 521 FEEEPIIGYKVRVWEVDQDMSRANDT---------I-IPVGNTLDADIVDLSPGKRYHMRVLAFSN------GG-DGRMS 583 (626)
Q Consensus 521 ~~~~~i~~Y~i~~~~~~~~~~~~~~~---------~-~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~------~G-~g~~s 583 (626)
..++.+.+|+|+|+..+...+..... . ......+.+.|.+|+|++.|.|+|+|.+. .| .|+||
T Consensus 224 ~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS 303 (314)
T 3bpo_C 224 NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWS 303 (314)
T ss_dssp TCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCC
T ss_pred ccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCC
Confidence 44556789999998765442110000 0 01245678999999999999999999995 34 35666
Q ss_pred CC
Q psy12061 584 SP 585 (626)
Q Consensus 584 ~~ 585 (626)
.+
T Consensus 304 ~~ 305 (314)
T 3bpo_C 304 QE 305 (314)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 71
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.93 E-value=5.5e-25 Score=194.15 Aligned_cols=160 Identities=20% Similarity=0.299 Sum_probs=127.8
Q ss_pred CCCCceEEEEeeeCCCCCCe-eEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.+. |.|+|||..+.... ++|.|.+++.+|+|.|+|.|.|. .....+.|.|..+
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~-------~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~~~ 89 (204)
T 3sgj_C 19 VLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA-------SSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVHIG 89 (204)
T ss_dssp EETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS-------SEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEECS
T ss_pred EECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc-------cEEEEecccccCCEEEEEEeCCC--cccccEEEEEecC
Confidence 56899999999999998875 99999999886543 77999999999999999999874 4456688888877
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|.+... + ...+.+|++++|.|.+.+.+++ ..+.|+|||..+... ..++.|.|.+++.+|+|.|+|.
T Consensus 90 p~~~~~-~-~~~v~~G~~v~L~C~~~~~~p~-~~v~W~k~g~~~~~~-----------~~~~~L~i~~v~~~D~G~Y~C~ 155 (204)
T 3sgj_C 90 WLLLQA-P-RWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKGRKYF-----------HHNSDFYIPKATLKDSGSYFCR 155 (204)
T ss_dssp SEEEEC-S-CSEEETTCCEEEEEEEGGGCCC-EEEEEEETTEEEEEE-----------EECCCEEESSCCGGGCEEEEEE
T ss_pred ceEecC-C-ceeEeCCCcEEEEEEecCCCCC-ceEEEEECCcEeecc-----------cCCceEEECcCCcccCEEEEEE
Confidence 765543 3 3778899999999999776442 367999999987532 1467899999999999999999
Q ss_pred EEe-CCCceEEEEEEEEeCCCCCCC
Q psy12061 161 VKS-TVGKISTKTTVIVEGPPGLPG 184 (626)
Q Consensus 161 a~n-~~g~~~~~~~l~v~~~P~~p~ 184 (626)
|.| ..+..+..+.|.|.++|..|.
T Consensus 156 a~n~~~~~~s~~~~l~V~~~~~~P~ 180 (204)
T 3sgj_C 156 GLVGSKNVSSETVQITITQGLAVST 180 (204)
T ss_dssp EEETTEEEECCCEEEEEEC------
T ss_pred EEeCCCceecCcEEEEEeCcCCCCc
Confidence 999 555667888999998887764
No 72
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.93 E-value=7.6e-25 Score=192.94 Aligned_cols=169 Identities=25% Similarity=0.387 Sum_probs=137.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCC--cEEE-ccCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKI-FENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~--~~~~-~~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.+.|+|+|..+.... ++.+ ..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 17 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 96 (194)
T 2a38_A 17 VLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELL 96 (194)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEE
Confidence 5689999999999999999999999999987542 3333 2333 699999999999999999999999888888888
Q ss_pred EEe--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCC--eEEEeecCCC
Q psy12061 77 VLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG--LLEITNASFA 152 (626)
Q Consensus 77 v~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~ 152 (626)
|.. .|+.+...+....+..|++++|.|.+.+.|.|. +.|+++|..+..... ..+...+. .|.|.+++.+
T Consensus 97 v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~ 169 (194)
T 2a38_A 97 VKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPV--VKFYRDGAEIQSSLD-----FQISQEGDLYSLLIAEAYPE 169 (194)
T ss_dssp EECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCE--EEEEETTEECCCSSS-----EEEEEETTEEEEEEEEECGG
T ss_pred EccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCe--EEEEECCEECCCCCc-----EEEEEcCCEEEEEECCCChh
Confidence 873 333344456788999999999999999988874 699999999875421 11222222 7999999999
Q ss_pred CCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 153 DAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|+|.|+|.|.|..|..+..+.|.|+
T Consensus 170 d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 170 DSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999999999999998888874
No 73
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.93 E-value=2.3e-23 Score=213.74 Aligned_cols=262 Identities=13% Similarity=0.116 Sum_probs=160.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EEcc------------CCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~i~------------~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.|.|.+.|.|+|++ ..+. ..+|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 91 (523)
T 2rcj_C 12 GTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWN 91 (523)
T ss_pred EecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEcc
Confidence 578999999999999999999999974 2211 13566643332 699999999999999999999
Q ss_pred CCCC---ceeeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCcc----C
Q psy12061 65 VHGM---DESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL----E 133 (626)
Q Consensus 65 ~~g~---~~~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~----~ 133 (626)
..|. ....+.|.|. .+|.+.. .+....+.+|++++|.|.+.+.|++.+++.|+|||..+........ .
T Consensus 92 ~~g~~~~~~~~~~l~V~~~~~~~P~~~~-~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 170 (523)
T 2rcj_C 92 SSDNSYVFGTGTKVTVLGQPKANPTVTL-FPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQS 170 (523)
T ss_pred CCCccccccCceEEEeccCCCcCCeEEe-cCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccC
Confidence 8764 2345788884 3454443 3555567789999999999998876567899999998864321000 0
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeC-CCCCCCce----EEEEEeccceEEEEecCCCCCC
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEG-PPGLPGGV----QVVEVHKTSATIQWTDGATNGR 208 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~-~P~~p~~~----~~~~~~~~~~~l~W~~~~~~~~ 208 (626)
...+ ...+.|.|.+++.+|+|.|+|.|.|..|.....+.+.+.. .+.+|.-. .........+.|.|........
T Consensus 171 ~~~~-~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~ 249 (523)
T 2rcj_C 171 NNKY-AASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQ 249 (523)
T ss_pred CCCE-EEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCC
Confidence 0000 0123699999999999999999999998776666543321 12222110 0011234556666653211111
Q ss_pred cccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 209 PITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 209 ~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
++ .|.|..++...-... ..........+.....+.|.. +...+ +.|+|.|.|..|..
T Consensus 250 p~---~v~W~k~g~~~~~~~-~~~~~~~~g~~~~~s~L~i~~-~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 250 PV---TVSWNSGALTSGVHT-FPAVLQSSGLYSLSSVVTVPS-SSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred Ce---EEEEecCCcccceEe-CCcEecCCCcEEEEEEEEech-hhcCC-ceEEEEEEeCCCCc
Confidence 11 223322221100000 000000000111122455554 77778 99999999999864
No 74
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.93 E-value=1.2e-25 Score=197.02 Aligned_cols=163 Identities=15% Similarity=0.083 Sum_probs=120.2
Q ss_pred CCCCceEEEEee---eCCCCCCeeEEEeCCEEccC-----------------CCcEEEccC---CcEEEccCCCCCCEEE
Q psy12061 2 AGEGGNVTIFCN---PEAAPKPKFVWKKDGNIIGS-----------------GGRRKIFEN---GNLLISPVSRDDSGIY 58 (626)
Q Consensus 2 ~~~G~~~~l~C~---~~g~p~p~i~W~~~~~~i~~-----------------~~~~~~~~~---g~L~i~~v~~~d~G~Y 58 (626)
|..|++++|.|. +.+.|.|.|.|+|+|..+.. ..++.+..+ .+|.|.+++.+|+|.|
T Consensus 5 a~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 84 (203)
T 4fa8_A 5 AFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNY 84 (203)
T ss_dssp EETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEE
Confidence 468999999994 67889999999998753311 122222222 2699999999999999
Q ss_pred EEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE
Q psy12061 59 SCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN 138 (626)
Q Consensus 59 ~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 138 (626)
+|.|.|..|.....+.|.|..+|.+. ..+.+..+.+|++++|.|.+.|.|.|. |.|++++..+.... ....++.
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~~p~~~~-~~~~~~~v~~g~~~~l~C~~~G~P~P~--v~W~~~~~~~~~~~---~~~~r~~ 158 (203)
T 4fa8_A 85 LCRMKLGETEVTKQEHLSVVKPLTLS-VHSERSQFPDFSVLTVTCTVNAFPHPH--VQWLMPEGVEPAPT---AANGGVM 158 (203)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEE-EEEEECCSSCSCCEEEEEEEEEESCCE--EEECCC---------------CCE
T ss_pred EEEEEcCCCcEEEEEEEEecCCceee-ecceeEEEcCCCEEEEEEEcCCCCCCE--EEEEECCeeecCcc---cccceEE
Confidence 99999999999999999997766554 456778889999999999999999885 58998765543211 1113333
Q ss_pred e-cCCeEE---EeecCCCCCEeEEEEEEeCCCceEE
Q psy12061 139 I-DGGLLE---ITNASFADAGEYECVVKSTVGKIST 170 (626)
Q Consensus 139 ~-~~~~l~---i~~~~~~d~g~Y~C~a~n~~g~~~~ 170 (626)
. .++.|. |.+++.+|+|.|+|.|.|..|.++.
T Consensus 159 ~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 159 KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 3 445544 4689999999999999999998765
No 75
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.93 E-value=6.5e-25 Score=193.85 Aligned_cols=169 Identities=21% Similarity=0.231 Sum_probs=139.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC-CcEEEc--cCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIF--ENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~-~~~~~~--~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.+.|.|+|+|..+... .++.+. .++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~ 95 (197)
T 2j8h_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLE 95 (197)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEE
Confidence 568999999999999999999999999998754 455553 344 799999999999999999999999888888999
Q ss_pred EEeCCceeee----CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cCCeEEEee-c
Q psy12061 77 VLHGPSYYEQ----LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLEITN-A 149 (626)
Q Consensus 77 v~~~p~~~~~----~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~-~ 149 (626)
|..+|.+... .+....+..|++++|.|.+.+.|.| .+.|++++..+..... ..+.. ..+.|.|.+ +
T Consensus 96 V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~ 168 (197)
T 2j8h_A 96 VEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGH-----YQVIVTRSFTSLVFPNGV 168 (197)
T ss_dssp EEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCC--EEEEEESSCEECSSSS-----CEEEECSSEEEEECTTCC
T ss_pred EcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCC--cEEEEECCEEeecCCC-----EEEEEcCCceEEEEeCCC
Confidence 9876655321 1345778899999999999999876 5689999999875421 11111 346899999 9
Q ss_pred CCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 150 SFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 169 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 169 ERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999999999999999999999998875
No 76
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=207.83 Aligned_cols=249 Identities=15% Similarity=0.203 Sum_probs=166.5
Q ss_pred CCCCceEEEEeeeC-CCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
|.+|++++|.|... |.|.|.|.|+|||.++..+.|+.+..+| +|.|.+++.+|+|.|+|.|.|..|... .+.+.|
T Consensus 13 v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v 91 (312)
T 2y23_A 13 VDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDE 91 (312)
T ss_dssp ECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECH
T ss_pred EecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEE
Confidence 56899999999885 5799999999999999988888887765 799999999999999999999988544 556666
Q ss_pred Ee------------CCceeeeCCCceEEecCCcEEEEEEec-ccCCcceeEEEeeCCEEeccccCCccCCCeeEec--C-
Q psy12061 78 LH------------GPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNINID--G- 141 (626)
Q Consensus 78 ~~------------~p~~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~--~- 141 (626)
.. +|.+...++....+.+|++++|.|.+. +.|.+ .+.|++++..+..... ..+... .
T Consensus 92 ~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~i~~~~~-----~~~~~~~~~~ 164 (312)
T 2y23_A 92 EELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNA--KVNYIFNEKEIFEGPK-----YKMHIDRNTG 164 (312)
T ss_dssp HHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSC--EEEEEETTEEECSSSS-----CEEEEETTTT
T ss_pred eeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCC--EEEEEECCEECeeCCc-----EEEEEccCCC
Confidence 43 565555444588899999999999999 77765 5689999999876421 122211 2
Q ss_pred -CeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE-------------------eCCCCCCCceEEEEEeccceEEEEe
Q psy12061 142 -GLLEITNASFADAGEYECVVKSTVGKISTKTTVIV-------------------EGPPGLPGGVQVVEVHKTSATIQWT 201 (626)
Q Consensus 142 -~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v-------------------~~~P~~p~~~~~~~~~~~~~~l~W~ 201 (626)
..|.|.+++.+|+|.|+|.+.|..+.......+.. ..+|..-..+.........+.|.|.
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~ 244 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCK 244 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEE
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEE
Confidence 24999999999999999999865544433333210 0112110111223334566777776
Q ss_pred cCCCCCCcccEEEEEEeecCCCCceEeecceeeeeeecc-CCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 202 DGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY-TGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 202 ~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.... ..+. . + .|.+....+........ .+...+.|.+ +...+.+.|+|.|.|..|..
T Consensus 245 ~~~~-p~~~-~--v--------~W~~~g~~~~~~~~~~~~~~~~~L~I~~-v~~~d~G~Y~C~a~N~~G~~ 302 (312)
T 2y23_A 245 VANI-KKET-H--I--------VWYKDEREISVDEKHDFKDGICTLLITE-FSKKDAGIYEVILKDDRGKD 302 (312)
T ss_dssp EESC-CSSC-E--E--------EEEETTEEEEEECCC----CEEEEEECS-CSGGGCEEEEEEEESTTCCE
T ss_pred EcCC-CCCC-E--E--------EEeeCCEECCCCCcEEEECCEEEEEECc-CCHHHCEEEEEEEEcCCCce
Confidence 4221 1110 1 2 23332222211111111 2223566655 99999999999999999854
No 77
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=1.4e-22 Score=211.19 Aligned_cols=356 Identities=15% Similarity=0.135 Sum_probs=217.5
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEcc-------------CCCcEEEccCC------cEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIG-------------SGGRRKIFENG------NLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~-------------~~~~~~~~~~g------~L~i~~v~~~d~G~Y~C~ 61 (626)
+.+|++++|.|.+.+. |.+.+.|+|++..+. ..+|+.+..++ +|.|.+++.+|+|.|+|.
T Consensus 124 v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 203 (585)
T 2ocw_A 124 VDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQ 203 (585)
T ss_pred EEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEE
Confidence 5689999999999876 456899999876421 13566776555 699999999999999999
Q ss_pred EEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcc-eeEEEe-eCCEE----eccccC-CccCC
Q psy12061 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD-VAYIWT-HNGVR----IGNMDL-NELET 134 (626)
Q Consensus 62 a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~-~~i~W~-~~~~~----~~~~~~-~~~~~ 134 (626)
|.|..|.....+.|.|..+| |..+.+.+|++++|.|.+ +.+.|. +.|.|+ +||.. +..... .....
T Consensus 204 a~n~~g~~~~~~~l~V~~~~------p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~ 276 (585)
T 2ocw_A 204 AGDDSNSNKKNADLQVLKPE------PELVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFE 276 (585)
T ss_pred eccCCccccceEEEEEccCC------CceeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccC
Confidence 99999998888999996643 455678899999999997 444443 788997 88842 211110 00012
Q ss_pred CeeEec----CC--eEEEeecCCCCCEeEEEEEEeCCCceE-----EEEEEEEeCCCCCCCceE-EEEEeccceEEEEec
Q psy12061 135 PNINID----GG--LLEITNASFADAGEYECVVKSTVGKIS-----TKTTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTD 202 (626)
Q Consensus 135 ~~~~~~----~~--~l~i~~~~~~d~g~Y~C~a~n~~g~~~-----~~~~l~v~~~P~~p~~~~-~~~~~~~~~~l~W~~ 202 (626)
.++... ++ .|.|.+++.+|+|.|+|.|.|. |... ..+.|.|..+|..+..+. ........+.|.|..
T Consensus 277 ~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~ 355 (585)
T 2ocw_A 277 GRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPY 355 (585)
T ss_pred CceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEec
Confidence 333332 34 7999999999999999999995 4443 788899988876543322 223456678888885
Q ss_pred CCCCCCcccEEEEEEee--cCCCCceEee---------cceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 203 GATNGRPITHYKIIART--NWNSTWFNVS---------EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 203 ~~~~~~~~~~y~v~~~~--~~~~~w~~~~---------~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.. ...+...|.+.|.. ++........ ...... .....+...+.|.+ +...+.+.|+|.| |..|..
T Consensus 356 ~~-~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~-~~~~~g~~~L~I~~-v~~~D~G~Y~C~a-n~~g~~ 431 (585)
T 2ocw_A 356 NR-KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLL-EEPGNGTFTVILNQ-LTSRDAGFYWCLT-NGDTLW 431 (585)
T ss_pred CC-CCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEe-ccCCCcEEEEEECC-CChhhCEEEEEcc-cCCCcc
Confidence 32 22333345445544 3221010000 000000 00001222355555 8999999999999 877754
Q ss_pred CCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceee-------eeeeec
Q psy12061 272 EPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSE-------TLKEYG 344 (626)
Q Consensus 272 ~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~-------~~~~~~ 344 (626)
...... .+...+ +....|..+.+.. ...+.|.+.... ...+ .-.+.|.|.+.+....... ......
T Consensus 432 ~~~~~l-~V~~~~-p~~~~~~~~~v~~--G~~v~L~C~~~~-~~~~--~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 504 (585)
T 2ocw_A 432 RTTVEI-KIIEGE-PNLKVPGNVTAVL--GETLKVPCHFPC-KFSS--YEKYWCKWNNTGCQALPSQDEGPSKAFVNCDE 504 (585)
T ss_pred ceeEEE-EEecCc-cccccCCceeEec--CCcEEEEEEecC-CCCC--CccEEEEEeecCceeeeccCCCCCcceEEecC
Confidence 322221 111111 1112244444443 356788887621 1111 1235777877652110000 011111
Q ss_pred ceeeEEEEeCCCcceeEEEEEEEEecCCCCCC
Q psy12061 345 NVGIAVVRIPSEFYYTEYEVKVQAINDVGPGP 376 (626)
Q Consensus 345 ~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~ 376 (626)
+.....+.|.++.......|+|.|.|..|.+.
T Consensus 505 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 536 (585)
T 2ocw_A 505 NSRLVSLTLNLVTRADEGWYWCGVKQGHFYGE 536 (585)
T ss_pred cccEEEEEECCCCcccCeEEEEEeEeCCCccE
Confidence 22335788888888888889999999998655
No 78
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.93 E-value=6e-25 Score=199.69 Aligned_cols=182 Identities=23% Similarity=0.381 Sum_probs=142.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCc----EEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~----~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+....+ .....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 31 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 110 (231)
T 3ojm_B 31 VPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 110 (231)
T ss_dssp EETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEE
Confidence 56899999999999999999999999999875433 23334457999999999999999999999998888888988
Q ss_pred EeC----CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee----CCEEeccccCCccCC----CeeEecCCeEE
Q psy12061 78 LHG----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNELET----PNINIDGGLLE 145 (626)
Q Consensus 78 ~~~----p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~----~~~~~~~~~~~~~~~----~~~~~~~~~l~ 145 (626)
... |.+....+....+..|++++|.|.+.+.|.| .+.|++ +|..+.......... .......+.|.
T Consensus 111 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 188 (231)
T 3ojm_B 111 VERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQP--HIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLA 188 (231)
T ss_dssp ECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCC--EEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEE
T ss_pred EcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCC--EEEEEECCCCCCccccCCCcceEeEecccccccCCccEEE
Confidence 763 3334444677899999999999999999877 568999 777775442111100 00112346799
Q ss_pred EeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCc
Q psy12061 146 ITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185 (626)
Q Consensus 146 i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~ 185 (626)
|.++..+|+|.|+|.|.|..|..+..+.|.|..+|.+|..
T Consensus 189 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 189 LFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGR 228 (231)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----
T ss_pred EecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCcc
Confidence 9999999999999999999999999999999999988854
No 79
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.93 E-value=1e-24 Score=191.26 Aligned_cols=169 Identities=21% Similarity=0.315 Sum_probs=134.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc--CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce--eeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~--~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~v 77 (626)
+.+|++++|.|.+.+.|.+.+.|+|++..+. ...|+.+..+++|.|.+++.+|+|.|+|.|.|..+... ....+.|
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v 93 (189)
T 2v5t_A 14 FKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 93 (189)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEe
Confidence 5689999999999999999999999999886 46788888889999999999999999999999876543 3456777
Q ss_pred EeCCceeeeCCC-ceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 78 LHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 78 ~~~p~~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
..+|.+...+.. ...+..|++++|.|.+.+.|.| .+.|+++|..+..... ......++.|.|.++..+|+|.
T Consensus 94 ~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~g~~~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~ 166 (189)
T 2v5t_A 94 NVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP--AISWFRNGKLIEENEK-----YILKGSNTELTVRNIINSDGGP 166 (189)
T ss_dssp EEEEEEECSCCEEEEETTSCCCEEEECEEEEESCC--EEEEEETTEECCCSSS-----EEEETTTTEEEECSCCGGGCEE
T ss_pred cCCCCcccccccccccccCCCcEEEEEEEccCCCC--eEEEEECCEECcCCCc-----EEEecCCCEEEEcCCChhhCee
Confidence 667665543222 4577889999999999998876 5699999999875421 1222346789999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEe
Q psy12061 157 YECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|+|.|.|..|..+..+.|.|.
T Consensus 167 Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 167 YVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCceeEEEEEEEE
Confidence 999999999999888888875
No 80
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.92 E-value=1.3e-25 Score=216.40 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=107.6
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|. |.|.|.|+|||..+..+.|+.+ .+++|.|.+++.+|+|.|+|.|.|. |.....+.|.|...
T Consensus 20 v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~ 97 (334)
T 1ry7_B 20 FGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV-GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDA 97 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe-ccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEecc
Confidence 6789999999999987 6789999999999987777665 5678999999999999999999999 77777778888654
Q ss_pred Cc---------------------eeeeC----CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCC
Q psy12061 81 PS---------------------YYEQL----PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP 135 (626)
Q Consensus 81 p~---------------------~~~~~----~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~ 135 (626)
|. .+..+ +....+.+|++++|.|.+.+.|.| .+.|+|++..+...... ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~--~~~ 173 (334)
T 1ry7_B 98 PSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP--SISWLKNGREFRGEHRI--GGI 173 (334)
T ss_dssp ---------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCC--EEECCBTTBCCCTTSST--TCC
T ss_pred CccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCC--eEEEEECCEECcccccc--cce
Confidence 32 22211 234678899999999999998876 56999999988654210 011
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCC-CCCc-----eEEEEEeccceEEEEecCCCCCCc
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG-LPGG-----VQVVEVHKTSATIQWTDGATNGRP 209 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~-~p~~-----~~~~~~~~~~~~l~W~~~~~~~~~ 209 (626)
........|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+. +|.. ..........+.|.|... +.+
T Consensus 174 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~---g~p 250 (334)
T 1ry7_B 174 KLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY---SDA 250 (334)
T ss_dssp CCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCB---CSS
T ss_pred ecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEe---cCC
Confidence 2223567899999999999999999999999999999999886432 2210 112233455677777642 222
Q ss_pred ccEEEEEEee----cCCCCceEeecc-eeeeee---ec-cCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 210 ITHYKIIART----NWNSTWFNVSEH-VIGKEV---DR-YTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 210 ~~~y~v~~~~----~~~~~w~~~~~~-~~~~~~---~~-~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
.. .+.|.. ++.. ....... ...... .. ......+.+.+ +...+.+.|+|.|.|..|...
T Consensus 251 ~p--~v~W~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 318 (334)
T 1ry7_B 251 QP--HIQWLKHVEVNGSK-VGPDGTPYVTVLKTAGANTTDKELEVLSLHN-VTFEDAGEYTCLAGNSIGFSH 318 (334)
T ss_dssp CE--EEEEEECCCGGGCS-BCTTSSBCCCCCCCSSCSCSCTTCCCEEECS-CCTTSCSEEEEEEEESSCCEE
T ss_pred CC--eEEEEECCcCCCcc-ccCCCCeeEEEeecCccccccccccEEEEcc-CCHHHCEEEEEEEeCCCCeEE
Confidence 22 233322 1100 0000000 000000 00 00112466655 899999999999999998543
No 81
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.92 E-value=9e-24 Score=200.76 Aligned_cols=271 Identities=16% Similarity=0.150 Sum_probs=182.9
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCC--eEEEeecCCCCC
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGG--LLEITNASFADA 154 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~--~l~i~~~~~~d~ 154 (626)
+|.+. ..|.+..+.+|++++|.|.+.+.|.+ .+.|+|+|..+.... .++.. .++ .|.|.+++.+|+
T Consensus 4 ~P~~~-~~p~~~~v~~G~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~d~ 74 (305)
T 2nzi_A 4 APHFK-EELRNLNVRYQSNATLVCKVTGHPKP--IVKWYRQGKEIIADG------LKYRIQEFKGGYHQLIIASVTDDDA 74 (305)
T ss_dssp CCEEE-ECCCCEEECTTCCEEEEEEEECSSCC--EEEEEETTEECCCCS------SSEEEEEETTTEEEEEESSCCGGGC
T ss_pred CCeee-ecccceEEeCCCcEEEEEEEeCCCCC--eEEEEECCEEcccCC------CeEEEEECCCCEEEEEEccCChhhC
Confidence 34444 45778999999999999999998876 569999999987542 22222 233 899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCC--CCc----eEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEe
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGL--PGG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~--p~~----~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~ 228 (626)
|.|+|.|.|..|..+..+.|.|..+|.. |.. ..........+.|.|.... .+.. .+.|...+
T Consensus 75 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p--~i~W~~~~------- 142 (305)
T 2nzi_A 75 TVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG---KPDP--VITWQKGQ------- 142 (305)
T ss_dssp SEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEE---ESCC--EEEEEESS-------
T ss_pred eEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECC---CCCC--EEEEEECC-------
Confidence 9999999999999999999998865532 110 0111223344555554211 0111 12222211
Q ss_pred ecceeeee---eeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEE
Q psy12061 229 SEHVIGKE---VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLS 305 (626)
Q Consensus 229 ~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~ 305 (626)
..+.... .........+.+.+.+.+.+.|.|+|.|.|..|....+... .+. .++.+|.++.+......++.
T Consensus 143 -~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l-~v~----~~P~~p~~~~~~~~~~~~v~ 216 (305)
T 2nzi_A 143 -DLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVEL-DVA----DVPDPPRGVKVSDVSRDSVN 216 (305)
T ss_dssp -SBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEE-EEE----BCCCCCEEEEEESCCSSCEE
T ss_pred -EECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEE-EEe----cCCCCCCCceeeeccCCEEE
Confidence 1110000 00001222344433388999999999999999976433221 111 23367888888888889999
Q ss_pred EEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEE
Q psy12061 306 ISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTI 383 (626)
Q Consensus 306 l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~ 383 (626)
|+|.++ ..+++.++..|.++++......|....... ...+.+.+|.+++.|.|+|+|.|..|.+.+|.....
T Consensus 217 l~w~~p-~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~-----~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~ 288 (305)
T 2nzi_A 217 LTWTEP-ASDGGSKITNYIVEKCATTAERWLRVGQAR-----ETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEP 288 (305)
T ss_dssp EEEECC-SCCSBSCEEEEEEEEEETTSCCEEEEEEES-----SSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCC
T ss_pred EEEcCC-ccCCCCceeEEEEEEecCCCCccEECcccc-----CceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCC
Confidence 999973 445667899999999988878887654331 346789999999999999999999999988877643
No 82
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.92 E-value=1.2e-24 Score=194.66 Aligned_cols=174 Identities=27% Similarity=0.492 Sum_probs=139.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC-----CcEEEccCCcEEE-----ccCCCCCCEEEEEEEEcCCCCc-e
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-----GRRKIFENGNLLI-----SPVSRDDSGIYSCTATNVHGMD-E 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~-----~~~~~~~~g~L~i-----~~v~~~d~G~Y~C~a~n~~g~~-~ 70 (626)
+.+|++++|.|.+.|.|.+.+.|+|+|..+... .+.....++.+.+ .+++.+|+|.|+|.|.|..|.. .
T Consensus 21 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 100 (212)
T 2v9r_A 21 VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100 (212)
T ss_dssp ECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEEC
T ss_pred EeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceee
Confidence 578999999999999999999999999998643 2344555665544 5568999999999999998875 4
Q ss_pred eeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeec
Q psy12061 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 71 ~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
..+.|.|...|..+...+....+..|++++|.|.+ .+.|.| .+.|++++..+.... .++...++.|.|.++
T Consensus 101 ~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~l~~~~------~~~~~~~~~L~i~~~ 172 (212)
T 2v9r_A 101 HDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEP--TISWKKDGSPLDDKD------ERITIRGGKLMITYT 172 (212)
T ss_dssp CCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCC--EEEEEETTEEECTTS------TTEEEETTEEEESSC
T ss_pred cceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCC--EEEEEECCccCCCCc------ceEEccCCeEEEeeC
Confidence 56788887765555556778899999999999998 888876 569999999997543 455667889999999
Q ss_pred CCCCCEeEEEEEEeCCCceEE-EEEEEEeCCCCCC
Q psy12061 150 SFADAGEYECVVKSTVGKIST-KTTVIVEGPPGLP 183 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~~~~-~~~l~v~~~P~~p 183 (626)
+.+|+|.|+|.|.|..|.... .+.|.|..+|...
T Consensus 173 ~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 173 RKSDAGKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred CHhhCeeEEEEEecccCceecceEEEEEEeCchHh
Confidence 999999999999999998655 4899999887644
No 83
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=1.4e-24 Score=210.65 Aligned_cols=168 Identities=22% Similarity=0.278 Sum_probs=133.5
Q ss_pred CCCCceEEEEeeeCCCCC-----------CeeEEEeCCE------Ecc---CCCcEEEccCCcEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPK-----------PKFVWKKDGN------IIG---SGGRRKIFENGNLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~-----------p~i~W~~~~~------~i~---~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++++|.|.+.|.|. +.|.|+|++. .+. ...++ ...+++|.|.+++.+|+|.|+|.
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~ 97 (349)
T 4dep_C 19 VFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI-SKEKDVLWFRPTLLNDTGNYTCM 97 (349)
T ss_dssp EETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE-EEETTEEEESSCCGGGCEEEEEE
T ss_pred EecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceE-eecCCEEEEccCChhhCEEEEEE
Confidence 579999999999998765 8999999884 332 22333 34567899999999999999999
Q ss_pred EEcCCCCceeeEEEEEEeCCceeee---CCCceEEecCCcEEEEEEe-----cccCCcceeEEEeeCCEEeccccCCccC
Q psy12061 62 ATNVHGMDESKGRLIVLHGPSYYEQ---LPPKITIAAHRNLQLRCSA-----HTEELLDVAYIWTHNGVRIGNMDLNELE 133 (626)
Q Consensus 62 a~n~~g~~~~~~~l~v~~~p~~~~~---~~~~~~v~~g~~~~l~C~~-----~~~p~p~~~i~W~~~~~~~~~~~~~~~~ 133 (626)
|.|..+.....+.|.|..+|..... .|....+..|++++|.|.+ .+.|.| .+.|+||+..+...
T Consensus 98 a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~--~v~W~k~~~~l~~~------ 169 (349)
T 4dep_C 98 LRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKP--TITWYMGCYKIQNF------ 169 (349)
T ss_dssp EECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCC--EEEEEETTEECCSC------
T ss_pred EecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCc--eEEEeeCCEECCCc------
Confidence 9999998888899999886654322 2446688999999999985 666665 56999999988542
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCC-Cce---EEEEEEEEeCC
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTV-GKI---STKTTVIVEGP 179 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~-g~~---~~~~~l~v~~~ 179 (626)
.++...+..|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|..+
T Consensus 170 -~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~ 218 (349)
T 4dep_C 170 -NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGS 218 (349)
T ss_dssp -SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred -cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEcc
Confidence 3455566889999999999999999999987 554 66777777764
No 84
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.92 E-value=2.5e-25 Score=212.88 Aligned_cols=168 Identities=22% Similarity=0.291 Sum_probs=127.7
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEccCCCcEEEccC-CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~~~~~~~~~~~-g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
+.+|++++|.|.+.+. |.+.|.|+|+|..+..+.++.+..+ .+|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 18 v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 97 (317)
T 2y25_A 18 VTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 97 (317)
T ss_dssp EETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHH
T ss_pred ECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEec
Confidence 5689999999999888 7899999999999987777666533 3799999999999999999999999877776666655
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecc----------cCCcceeEEEeeCCEEeccccCCccCCCeeEecC--CeEEEe
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHT----------EELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--GLLEIT 147 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~----------~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~ 147 (626)
.|.+... +....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+..... ......+ ..|.|.
T Consensus 98 ~~~~~~~-~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~--~i~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~ 169 (317)
T 2y25_A 98 FKELMME-VCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDL--KVNWSHNGSAIRYSDR-----VKTGVTGEQIWLQIN 169 (317)
T ss_dssp HHHHHHH-HHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSC--EEEEEESSSBCCCCSS-----EEEEECSSEEEEEEE
T ss_pred Ccccccc-CCceecccCCCeEEEeeccccEEEEEeccCCCCc--EEEEEECCEECCCCCC-----eEEeccCCEEEEEEC
Confidence 5444332 33455667888888888776 4554 5699999998875421 1122222 349999
Q ss_pred ecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 148 NASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
+++.+|+|.|+|.|.|..|..+..+.|.+.
T Consensus 170 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 199 (317)
T 2y25_A 170 EPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 199 (317)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred cCCcccCeeEEEEEEeCCceEEEEEEEeee
Confidence 999999999999999999988888887653
No 85
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=3e-24 Score=189.11 Aligned_cols=163 Identities=21% Similarity=0.351 Sum_probs=135.6
Q ss_pred CCCCceEEEEeeeC-CCCCCeeEEEeCCEEccCC--CcEEEc--c--------CCcEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSG--GRRKIF--E--------NGNLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~i~~~--~~~~~~--~--------~g~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|++++|.|.+. |.|.+.|.|+|||..+... .++++. . +++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 14 v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 93 (195)
T 2c5d_C 14 GARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQT 93 (195)
T ss_dssp ECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEE
T ss_pred EecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCc
Confidence 57899999999999 9999999999999999765 233332 2 247999999999999999999998877
Q ss_pred ceee-EEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEe
Q psy12061 69 DESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 147 (626)
Q Consensus 69 ~~~~-~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 147 (626)
.... +.|.|..+|.+.. .|....+.+|++++|.|.+.+.|.|. ++.|++++..+..... . ...+.|.|.
T Consensus 94 ~~~~~~~l~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~-~v~W~~~~~~~~~~~~------~--~~~~~L~i~ 163 (195)
T 2c5d_C 94 FVSQPGYVGLEGLPYFLE-EPEDRTVAANTPFNLSCQAQGPPEPV-DLLWLQDAVPLATAPG------H--GPQRSLHVP 163 (195)
T ss_dssp EECCCEEEEECCSCEEEE-CCCCEEECTTCCEEEEEEEECSSCCC-EEEEEESSCBSSSSTT------S--SCCEEEEEC
T ss_pred eecccEEEEEecCCeEEc-CCCcEEEcCCCEEEEEeECCCCCCCC-EEEEEECCEeccCCCC------c--CCCCeEEEc
Confidence 5544 8899988886655 56778999999999999999998762 4699999998875431 1 456789999
Q ss_pred ecCCCCCEeEEEEEEeCCCceE-EEEEEEE
Q psy12061 148 NASFADAGEYECVVKSTVGKIS-TKTTVIV 176 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~~-~~~~l~v 176 (626)
+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 164 ~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 164 GLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 986 89999999999999885 7888888
No 86
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=198.62 Aligned_cols=182 Identities=22% Similarity=0.353 Sum_probs=139.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCc----EEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR----RKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~----~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.+.|.|+|+|..+....+ .....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 27 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V 106 (241)
T 3grw_A 27 VPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDV 106 (241)
T ss_dssp EETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEE
Confidence 46899999999999999999999999999865432 23344568999999999999999999999998888888888
Q ss_pred Ee----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee----CCEEeccccCCccCCCe-----eEecCCeE
Q psy12061 78 LH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNELETPN-----INIDGGLL 144 (626)
Q Consensus 78 ~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~----~~~~~~~~~~~~~~~~~-----~~~~~~~l 144 (626)
.. +|.+....+....+..|++++|.|.+.+.|.| .+.|++ +|..+............ .....+.|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L 184 (241)
T 3grw_A 107 LERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRL 184 (241)
T ss_dssp ECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCC--EEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEE
T ss_pred eccCCCCceeecCCCccceecCCCEEEEEEEEecCCCC--EEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEE
Confidence 76 34445556778889999999999999999887 569999 78777644211100000 00134579
Q ss_pred EEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCc
Q psy12061 145 EITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGG 185 (626)
Q Consensus 145 ~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~ 185 (626)
.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|.+|..
T Consensus 185 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~ 225 (241)
T 3grw_A 185 RLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEE 225 (241)
T ss_dssp EECSCCGGGCEEEEEEEECSSCEEEEEEEEEC---------
T ss_pred EECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCcc
Confidence 99999999999999999999999999999999999887754
No 87
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.92 E-value=4.2e-24 Score=187.17 Aligned_cols=166 Identities=20% Similarity=0.342 Sum_probs=136.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe-CCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCc-eeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK-DGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMD-ESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~-~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|. .+.|+| +|..+....++.+..++ +|.|.+++.+|+|.|+|.|.|..|.. ...+.|.
T Consensus 14 v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~ 92 (189)
T 2v44_A 14 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 92 (189)
T ss_dssp EETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEE
T ss_pred EecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEE
Confidence 568999999999999987 999999 88888888888887766 79999999999999999999998876 5667888
Q ss_pred EEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCE
Q psy12061 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAG 155 (626)
Q Consensus 77 v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g 155 (626)
|..+|.+.. .+....+..|++++|.|.+.+.|.| .+.|++++..+.... ..++. ..++.|.|.+++.+|+|
T Consensus 93 v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~~-----~~~~~~~~~~~L~i~~v~~~d~G 164 (189)
T 2v44_A 93 IYQKLTFRE-VVSPQEFKQGEDAEVVCRVSSSPAP--AVSWLYHNEEVTTIS-----DNRFAMLANNNLQILNINKSDEG 164 (189)
T ss_dssp EECCCEEES-CCCSEEEETTSCEEECCEEECSSCC--EEEEEEEC--CEECC-----CTTEEECTTSCEEETTCCGGGCE
T ss_pred EecCCceee-cCCcEEEeCCCCEEEEEEECcCCCC--cEEEEECCcEEeccC-----CCCEEEecCCcEEEEEcCcccCe
Confidence 888876654 4566789999999999999999887 569999998876321 12333 35679999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEE
Q psy12061 156 EYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v 176 (626)
.|+|.|.|..|.......+.+
T Consensus 165 ~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 165 IYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEEccccCceeeeeEEE
Confidence 999999999977655444443
No 88
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.92 E-value=3.9e-24 Score=219.59 Aligned_cols=195 Identities=18% Similarity=0.195 Sum_probs=154.8
Q ss_pred CCCCceEEEEeeeCCCCCCe-eEEEeCCEEc--cCCCcEEEc------cCCcEEEccCCCCCCEEEEEEEEcCCCCceee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-FVWKKDGNII--GSGGRRKIF------ENGNLLISPVSRDDSGIYSCTATNVHGMDESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~i--~~~~~~~~~------~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 72 (626)
+.+|++++|.|.+.|.|.|. |.|+|++..+ ....+..+. .+++|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 223 v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~ 302 (524)
T 2ec8_A 223 LREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT 302 (524)
T ss_dssp EETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE
T ss_pred EEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE
Confidence 56899999999999999886 9999999883 333333332 24579999999999999999999999999889
Q ss_pred EEEEEEeCCceeeeC--CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe-------cCCe
Q psy12061 73 GRLIVLHGPSYYEQL--PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-------DGGL 143 (626)
Q Consensus 73 ~~l~v~~~p~~~~~~--~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 143 (626)
+.|.|..+|.+...+ +....+.+|++++|.|.+.+.|.|. .+.|+|+|..+....- ..... ....
T Consensus 303 ~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~-~v~W~k~g~~~~~~~~-----~~~~~~~~~~~~~~~~ 376 (524)
T 2ec8_A 303 TTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE-HQQWIYMNRTFTDKWE-----DYPKSENESNIRYVSE 376 (524)
T ss_dssp EEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCC-EEEEESSSCBCSSSBC-----CEESCCSSSCCEEEEE
T ss_pred EEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCc-EEEEEECCeeccCCcc-----ceeEEccCCCceeEEE
Confidence 999999888776543 2478999999999999999999875 3699999998875420 11111 2358
Q ss_pred EEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCC-------CCceEEEEEeccceEEEEec
Q psy12061 144 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL-------PGGVQVVEVHKTSATIQWTD 202 (626)
Q Consensus 144 l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~-------p~~~~~~~~~~~~~~l~W~~ 202 (626)
|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.. ...+.|...+.....+.|..
T Consensus 377 L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~ 442 (524)
T 2ec8_A 377 LHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYF 442 (524)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCC
T ss_pred EEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEE
Confidence 999999999999999999999999999999999876632 11456655566666777764
No 89
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.92 E-value=8.1e-24 Score=206.20 Aligned_cols=240 Identities=16% Similarity=0.186 Sum_probs=162.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEc--------------cCCCcEEEcc------CCcEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII--------------GSGGRRKIFE------NGNLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i--------------~~~~~~~~~~------~g~L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++++|.|.+.|.|.+.|.|+|++..+ ....|+.+.. +.+|.|.+++.+|+|.|+|.
T Consensus 6 ~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (363)
T 1wio_A 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE 85 (363)
T ss_dssp EETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEE
T ss_pred EeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEE
Confidence 679999999999999999999999998542 1234555442 44799999999999999999
Q ss_pred EEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC
Q psy12061 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141 (626)
Q Consensus 62 a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 141 (626)
|.|.. ..+.|.|... ..+| ...+.+|++++|.|.+.+.|.| .+.|+++|..+. ...
T Consensus 86 ~~n~~----~~~~l~V~~~----~~~~-~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~-------------~~~ 141 (363)
T 1wio_A 86 VEDQK----EEVQLLVFGL----TANS-DTHLLQGQSLTLTLESPPGSSP--SVQCRSPRGKNI-------------QGG 141 (363)
T ss_dssp ETTEE----EEEEEEEEEE----EESS-CSSEESBSCEEEEEECCTTCCC--CEEEECSSSCEE-------------EES
T ss_pred EEECC----CcEEEEEEeC----CCCC-ceEEecCCCEEEEEEcCCCCCC--eEEEEcCCCccc-------------ccc
Confidence 98873 3677777652 2223 2467899999999999998776 568999975542 256
Q ss_pred CeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCC-C-CcccEEEEEEee
Q psy12061 142 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATN-G-RPITHYKIIART 219 (626)
Q Consensus 142 ~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~-~-~~~~~y~v~~~~ 219 (626)
..|.|.+++.+|+|.|+|.|.|..+..+..+.|.|..+|..|..+ .......+.|.|...... + .| .-.+.|..
T Consensus 142 ~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~G~~v~l~C~~~~~~~~~~P--~p~i~W~~ 217 (363)
T 1wio_A 142 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIV--YKKEGEQVEFSFPLAFTVEKLTG--SGELWWQA 217 (363)
T ss_dssp SEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEE--EEETBCCEEEECCCCCCCCSSCE--EEEEEEEE
T ss_pred eEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCce--EEecCCEEEEEEEEecccccCCC--ceeEEEec
Confidence 799999999999999999999998888888888888777766322 223355666766532110 0 11 22333333
Q ss_pred cCCCC---ceEe---ecceeeeeee-------ccCCceeEEEEeeccCCceEEEEEEEecC--Ccc
Q psy12061 220 NWNST---WFNV---SEHVIGKEVD-------RYTGRKEASIENVLVPWSTYEFKVIAGNE--LGY 270 (626)
Q Consensus 220 ~~~~~---w~~~---~~~~~~~~~~-------~~~~~~~~~i~~~l~~~~~y~~~v~a~n~--~g~ 270 (626)
++... +... .......... ...+...+.+.+ +...+.+.|+|.|.|. .|.
T Consensus 218 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~~~g~ 282 (363)
T 1wio_A 218 ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ-ALPQYAGSGNLTLALEAKTGK 282 (363)
T ss_dssp SSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESS-BCGGGCEEEEEEECBTTTTCC
T ss_pred CCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEcc-CCcCcCcEEEEEEEEhhhcCe
Confidence 32210 0000 0000000000 001123556655 8899999999999999 773
No 90
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=6.3e-24 Score=184.80 Aligned_cols=162 Identities=23% Similarity=0.377 Sum_probs=135.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC-----CcEEEccCCCCCCEEEEEEEEcCCCC-ceeeEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN-----GNLLISPVSRDDSGIYSCTATNVHGM-DESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~-----g~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l 75 (626)
+.+|++++|.|.+.|.|.+.+.|+|++..+....+..+..+ ++|.|.+++.+|+|.|+|.|.|..|. ....+.|
T Consensus 14 v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l 93 (182)
T 1rhf_A 14 VSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWL 93 (182)
T ss_dssp EETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEE
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEE
Confidence 56899999999999999999999999999987766655443 47999999999999999999998776 4457899
Q ss_pred EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 76 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 76 ~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
.|..+|.+.. .+....+..|++++|.|.+.+.|.| +.+.|++++..+.... .....|.|.++ +|+|
T Consensus 94 ~V~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p-~~v~W~~~~~~~~~~~----------~~~~~L~i~~~--~d~G 159 (182)
T 1rhf_A 94 TVEGVPFFTV-EPKDLAVPPNAPFQLSCEAVGPPEP-VTIVWWRGTTKIGGPA----------PSPSVLNVTGV--TQST 159 (182)
T ss_dssp EEECSCEEEE-CCCCEEECTTCCEEEEEEEECSSSC-CEEEEEETTEECSCSE----------ESSEEEEECCC--SSCE
T ss_pred EEecCCeEEe-cCcceEecCCCEEEEEeEecCCCCC-CEEEEEcCCeECCCCC----------CCceEEEEecc--ccCe
Confidence 9988887665 4677899999999999999999876 2569999999986431 15678999998 5899
Q ss_pred eEEEEEEeCCCceE-EEEEEEEe
Q psy12061 156 EYECVVKSTVGKIS-TKTTVIVE 177 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~-~~~~l~v~ 177 (626)
.|+|.|.|..|... ..+.|.|+
T Consensus 160 ~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 160 MFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEECCCCCcccceEEEEeC
Confidence 99999999999875 47777763
No 91
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.92 E-value=2.4e-24 Score=209.89 Aligned_cols=220 Identities=13% Similarity=0.101 Sum_probs=165.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+ ...+++|.|.+++.+|+|.|+|.|.|..+.....+.|.|...|
T Consensus 108 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p 180 (363)
T 1wio_A 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 180 (363)
T ss_dssp EESBSCEEEEEECCTTCCCCEEEECSSSCE-------EEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCS
T ss_pred EecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------cccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCC
Confidence 568999999999999999999999997543 2356789999999999999999999987777777788887655
Q ss_pred ceeeeCCCceEEecCCcEEEEEEecc-----cCCcceeEEEeeCCEEeccccCCc-cCCCeeEe------------c--C
Q psy12061 82 SYYEQLPPKITIAAHRNLQLRCSAHT-----EELLDVAYIWTHNGVRIGNMDLNE-LETPNINI------------D--G 141 (626)
Q Consensus 82 ~~~~~~~~~~~v~~g~~~~l~C~~~~-----~p~p~~~i~W~~~~~~~~~~~~~~-~~~~~~~~------------~--~ 141 (626)
.. +....+.+|++++|.|.+.+ .|. ..+.|+++|..+....... ....++.. . .
T Consensus 181 ~~----~~~~~~~~G~~v~l~C~~~~~~~~~~P~--p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (363)
T 1wio_A 181 KA----SSIVYKKEGEQVEFSFPLAFTVEKLTGS--GELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLP 254 (363)
T ss_dssp CS----EEEEEEETBCCEEEECCCCCCCCSSCEE--EEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSS
T ss_pred CC----CCceEEecCCEEEEEEEEecccccCCCc--eeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCc
Confidence 43 35677889999999999887 444 4679999998876520000 00122222 2 3
Q ss_pred CeEEEeecCCCCCEeEEEEEEeC--CCceEEEEEEEEeCCCCCCCceEEEEEeccce--EEEEecCCCCCCcccEEEEEE
Q psy12061 142 GLLEITNASFADAGEYECVVKST--VGKISTKTTVIVEGPPGLPGGVQVVEVHKTSA--TIQWTDGATNGRPITHYKIIA 217 (626)
Q Consensus 142 ~~l~i~~~~~~d~g~Y~C~a~n~--~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~--~l~W~~~~~~~~~~~~y~v~~ 217 (626)
..|.|.+++.+|+|.|+|.|.|. .|..+..+.|.|...++.+..+.|...+.... .+.|... +..+..
T Consensus 255 ~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~---~~~~~~----- 326 (363)
T 1wio_A 255 LHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLE---NKEAKV----- 326 (363)
T ss_dssp CEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEEEECS---SSSCSE-----
T ss_pred eEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccccCCCccEEEEeC---CCceee-----
Confidence 48999999999999999999999 99999999999987777777888866554433 3788743 222211
Q ss_pred eecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCC
Q psy12061 218 RTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNEL 268 (626)
Q Consensus 218 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~ 268 (626)
...+.+.+ +.+.+.+.|+|.|.|..
T Consensus 327 -------------------------~~~l~i~~-v~~~d~G~Y~C~a~~~~ 351 (363)
T 1wio_A 327 -------------------------SKREKAVW-VLNPEAGMWQCLLSDSG 351 (363)
T ss_dssp -------------------------EESSSEEE-ESSCCSEEEEEEECSSS
T ss_pred -------------------------eeeeeeee-eccccceeEEEEEecCC
Confidence 01223444 88999999999999754
No 92
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.92 E-value=2.3e-24 Score=189.81 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=131.3
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCC-EEccCCCcEEEc-cCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDG-NIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~-~~i~~~~~~~~~-~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
.+|++++|.|.+.|.|.|.|.|+|+. .++ .++.... .+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 14 ~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~ 91 (202)
T 1vca_A 14 QIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSF 91 (202)
T ss_dssp ETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred cCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeC
Confidence 48999999999999999999999943 222 1222222 2346999999999999999999999888778889999888
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCC-cceeEEEeeCCEEeccccCCccCCCe-eEecCCeEEEeecCCCCCEeEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMDLNELETPN-INIDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~~i~W~~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~g~Y~ 158 (626)
|..+...+. ..+.+|++++|.|.+.+.++ +.++|.|+|++..+............ .......|.|..+...|.|.|+
T Consensus 92 p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~yt 170 (202)
T 1vca_A 92 PKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLV 170 (202)
T ss_dssp CSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEE
T ss_pred CCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEE
Confidence 766544444 67899999999999998644 34678999999988653211100000 0112345678888888999999
Q ss_pred EEEEeCCCc-------eEEEEEEEEeCCCC
Q psy12061 159 CVVKSTVGK-------ISTKTTVIVEGPPG 181 (626)
Q Consensus 159 C~a~n~~g~-------~~~~~~l~v~~~P~ 181 (626)
|.|.|..|. .+.+..|.|..+|.
T Consensus 171 C~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 171 CRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 999998875 35678888888874
No 93
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.92 E-value=2.8e-24 Score=216.28 Aligned_cols=233 Identities=13% Similarity=0.064 Sum_probs=157.6
Q ss_pred CCCCceEEEEeeeCCCCCC---eeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce--------
Q psy12061 2 AGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE-------- 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~-------- 70 (626)
+.+|++++|.|.+.|.|+| .|.|+|||.+|....+.....+++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 98 v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s 177 (450)
T 1z7z_I 98 QPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTS 177 (450)
T ss_dssp ECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEEC
T ss_pred EeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeecc
Confidence 5689999999999999888 99999999998644322222235799999999999999999999987543
Q ss_pred eeEEEEEEeCCceeeeCCCc---eEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEE
Q psy12061 71 SKGRLIVLHGPSYYEQLPPK---ITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 146 (626)
Q Consensus 71 ~~~~l~v~~~p~~~~~~~~~---~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 146 (626)
....|.|...|.. +|.. ..+.+|++++|.|.+.+. |.+.+.+.|+++|..+.. ++......+.+
T Consensus 178 ~~~~l~v~~~~~~---~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~---------~~~~~~~~~~~ 245 (450)
T 1z7z_I 178 APYQLQTFVLPAT---PPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---------TVTYGNDSFSA 245 (450)
T ss_dssp CCEECEECCCCSS---CCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC---------EEEEETTEEEE
T ss_pred CccceeeeccCCC---CCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc---------eEEecCCceeE
Confidence 3345555433211 2322 688999999999999998 644568899999998864 22223333333
Q ss_pred e---ecCCCCCE--eEEEEEEeCCCceEEEEEEEEeCCCCCCCceE-EEEEeccceEEEEecCCCCCCcccEEEEEEeec
Q psy12061 147 T---NASFADAG--EYECVVKSTVGKISTKTTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTN 220 (626)
Q Consensus 147 ~---~~~~~d~g--~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~-~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~ 220 (626)
. +++.+|+| .|+|.|.|..|..+..+.|.|...|.+...+. ........+.|.|... ..
T Consensus 246 ~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~C~~~---p~------------ 310 (450)
T 1z7z_I 246 KASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH---PR------------ 310 (450)
T ss_dssp EEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEEC------------------
T ss_pred EEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcEEEEEecC---CC------------
Confidence 3 77999999 99999999999999999999998665211000 0223455677777643 11
Q ss_pred CCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCc
Q psy12061 221 WNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELG 269 (626)
Q Consensus 221 ~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g 269 (626)
....| .+..+.. ......+.+.. +...+.+.|+|.|.|..|
T Consensus 311 p~i~W--~g~~~~~-----~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 311 AKVTL--NGVPAQP-----LGPRAQLLLKA-TPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp --------------------CCCCCEEEEC-CGGGTTCEEEEEEEEEET
T ss_pred CEeEE--CCEEcCC-----CCceEEEEEec-CcccCCceEEEEEEcCCC
Confidence 12234 1111100 01222556655 899999999999997654
No 94
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=1.1e-23 Score=197.90 Aligned_cols=168 Identities=21% Similarity=0.350 Sum_probs=143.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc---CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|+.++|.|.+.|.|.|.+.|+|++..+....++.+.. .+.|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 111 v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 190 (284)
T 2rik_A 111 VKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK 190 (284)
T ss_dssp EETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe
Confidence 4689999999999999999999999999998776665533 2369999999999999999999999998889999998
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEec--CCeEEEeecCCCCCEe
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGE 156 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~ 156 (626)
.+|.+.. .|....+..|++++|.|.+.+.|.| ++.|+++|..+..... ..+... ...|.|.+++.+|+|.
T Consensus 191 ~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~v~~~d~G~ 262 (284)
T 2rik_A 191 EPPVFRK-KPHPVETLKGADVHLECELQGTPPF--QVSWHKDKRELRSGKK-----YKIMSENFLTSIHILNVDSADIGE 262 (284)
T ss_dssp CCCBCCS-CCCCEEECTTCCEEEEEECBSSSCC--EEEEEETTEEECBTTT-----EEEEEETTEEEEEECSCCGGGCEE
T ss_pred cCCccee-CCCcceecCCCeEEEEEEEEecCCC--EEEEEECCEECcCCCC-----EEEEEcCCEEEEEEcCCCcccCEE
Confidence 8887665 4677889999999999999999876 5699999999876421 112222 2589999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEe
Q psy12061 157 YECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|+|.|.|..|..+..+.|.|+
T Consensus 263 Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 263 YQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEeCCCceeEEEEEEEc
Confidence 999999999999999998875
No 95
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.92 E-value=7e-24 Score=203.45 Aligned_cols=166 Identities=16% Similarity=0.203 Sum_probs=121.0
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEcc---------CCCcEEEcc--------CCcEEEccCCCCCCEEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIG---------SGGRRKIFE--------NGNLLISPVSRDDSGIYSCTAT 63 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~---------~~~~~~~~~--------~g~L~i~~v~~~d~G~Y~C~a~ 63 (626)
|.+|++++|.|.+.|. |.|.|.|+|++.++. ...|+.+.. +++|.|.+++.+|+|.|+|.|.
T Consensus 15 v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 94 (327)
T 2wng_A 15 VAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKF 94 (327)
T ss_dssp EETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEE
T ss_pred EecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEee
Confidence 5789999999999998 889999999876431 123555532 3479999999999999999999
Q ss_pred cCCCCc-----eeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCcc--CCCe
Q psy12061 64 NVHGMD-----ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL--ETPN 136 (626)
Q Consensus 64 n~~g~~-----~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~--~~~~ 136 (626)
|..+.. ...+.|.|..+|......+....+.+|++++|.|.+.+.|+|.+.+.|++||..+........ ....
T Consensus 95 n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 174 (327)
T 2wng_A 95 RKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 174 (327)
T ss_dssp ESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCS
T ss_pred cCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCC
Confidence 987642 234688887765432222234678899999999999998877567899999999875421000 0001
Q ss_pred eEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 137 INIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 137 ~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.....+.|.|......|.|.|+|.|.|..|.
T Consensus 175 ~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 175 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp CEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 1112235778777777789999999998876
No 96
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.92 E-value=9e-25 Score=210.99 Aligned_cols=170 Identities=19% Similarity=0.330 Sum_probs=136.0
Q ss_pred CCCCceEEEEeeeC-------CCCCCeeEEEeCCEEc--cCC--CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce
Q psy12061 2 AGEGGNVTIFCNPE-------AAPKPKFVWKKDGNII--GSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-------g~p~p~i~W~~~~~~i--~~~--~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 70 (626)
|.+|++++|.|.+. +.|.+.|.|+|+|..+ ... .|+. ..+++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 30 v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~ 108 (339)
T 3o4o_C 30 RLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMW-AQDGALWLLPALQEDSGTYVCTTRNASYCDK 108 (339)
T ss_dssp EETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEE-EETTEEEESSBCTTCCEEEECCEEETTEEEE
T ss_pred EECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEE-eeCCeEEECCCCcccCEEEEEEEECCcceEE
Confidence 67999999999998 8899999999999884 332 2433 5678999999999999999999999999888
Q ss_pred eeEEEEEEeCCcee-eeCCCceEEecCCcEEEEEE-----ecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cCC
Q psy12061 71 SKGRLIVLHGPSYY-EQLPPKITIAAHRNLQLRCS-----AHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGG 142 (626)
Q Consensus 71 ~~~~l~v~~~p~~~-~~~~~~~~v~~g~~~~l~C~-----~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~ 142 (626)
..+.|.|...|... ........+..|++++|.|. +.+.|.+ .+.|+|+|..+.... .++.. ..+
T Consensus 109 ~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~--~v~W~k~g~~~~~~~------~~~~~~~~~~ 180 (339)
T 3o4o_C 109 MSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV--KIQWYKDSLLLDKDN------EKFLSVRGTT 180 (339)
T ss_dssp EEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCC--CBCCEESSCBCCTTC------SSEEECTTSS
T ss_pred EEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCc--eEEEecCCeeCCCCC------ceeEEcCCcc
Confidence 88999998866542 11223457899999999999 7777776 458999999886542 33333 235
Q ss_pred eEEEeecCCCCCEeEEEEEEeCCC----ceEEEEEEEEeCCC
Q psy12061 143 LLEITNASFADAGEYECVVKSTVG----KISTKTTVIVEGPP 180 (626)
Q Consensus 143 ~l~i~~~~~~d~g~Y~C~a~n~~g----~~~~~~~l~v~~~P 180 (626)
.|.|.+++.+|+|.|+|.|.|..| ..+..+.|.|...+
T Consensus 181 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~ 222 (339)
T 3o4o_C 181 HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK 222 (339)
T ss_dssp EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC
T ss_pred eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC
Confidence 899999999999999999999887 45677888887543
No 97
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.91 E-value=2.7e-23 Score=200.97 Aligned_cols=309 Identities=14% Similarity=0.069 Sum_probs=168.1
Q ss_pred CEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEe-ccceEEEEecCCC-C--CCcccEEEEEEeecCCCCceEee
Q psy12061 154 AGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVH-KTSATIQWTDGAT-N--GRPITHYKIIARTNWNSTWFNVS 229 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~-~~~~~l~W~~~~~-~--~~~~~~y~v~~~~~~~~~w~~~~ 229 (626)
.+.++..+.|..|...... ....|.||.++.+...+ .+++.|+|+++.+ + +.....|.|+++..+...|....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~---~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~~~w~~~~ 85 (380)
T 3lb6_C 9 GCLYTFLISTTFGCTSSSD---TEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGSETWKTII 85 (380)
T ss_dssp -------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTCSSCEEEE
T ss_pred hhhhhheeecccccccCCc---ccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCCCcceEEE
Confidence 3445555666666432111 12258899999998666 6889999999865 2 24588999999998877898764
Q ss_pred cceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecC----CccCCCCCCCCccc--CCCCCCCCCCceeEeecCCcCe
Q psy12061 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNE----LGYGEPSSPSPQYN--TPADKPYQAPSRIGGGGGKIGD 303 (626)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~----~g~~~~s~~~~~~~--~~~~~p~~~p~~~~~~~~~~~~ 303 (626)
.. . ...... +..+..|.|||+|.|. .|.+.++..+.... +....|+.+|.++.........
T Consensus 86 ~~----------~--~~~~~~-~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~ 152 (380)
T 3lb6_C 86 TK----------N--LHYKDG-FDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQY 152 (380)
T ss_dssp ES----------S--SEEEEE-CCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTE
T ss_pred ec----------c--EEEEEe-ecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcE
Confidence 42 1 112222 6669999999999976 67776665443332 3446777899999998888899
Q ss_pred EEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeC--CCcceeEEEEEEEEecCCCCCCCCccE
Q psy12061 304 LSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIP--SEFYYTEYEVKVQAINDVGPGPESEVV 381 (626)
Q Consensus 304 v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~p~~~Y~~~v~a~n~~g~~~~s~~~ 381 (626)
+.++|++.. .. +....|.|.|+..+...+...............+.+. ++.+.+.|.|+|.|.|..|.+. +...
T Consensus 153 l~csW~p~~--~~-~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~-s~~~ 228 (380)
T 3lb6_C 153 LLCSWKPGI--GV-LLDTNYNLFYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIR-SSYF 228 (380)
T ss_dssp EEEEEECC---------CCEEEEEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CC-CEEE
T ss_pred EEEEEcCCC--CC-CCCccEEEEEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeec-cccE
Confidence 999999832 22 4567899999976644443322111111122234444 5678899999999999888765 3445
Q ss_pred EEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeC-Cc
Q psy12061 382 TIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG-LQ 460 (626)
Q Consensus 382 ~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~ 460 (626)
.+.+...+++.+|.++++...+.+++.|+|++|.... .+.+.+|.|+|+..+ ..+..... . .++.+.+ |+
T Consensus 229 ~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~~~---~~~~l~Yev~y~~~~-~~w~~~~~---~--~~~~l~~~L~ 299 (380)
T 3lb6_C 229 TFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLGPI---PARCFDYEIEIREDD-TTLVTATV---E--NETYTLKTTN 299 (380)
T ss_dssp EECGGGSCCCCCCEEEEEC-------CEEEECCSSSC---CSTTEEEEECC---------CCEE---S--SSCC------
T ss_pred EEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCCCC---CcceEEEEEEEEeCC-CCceEecc---c--ceEEEeCccC
Confidence 6666665666699999998877889999999886431 135789999998853 22222111 1 2367888 99
Q ss_pred cCceEEEEEEEeeC-----CC-CCCCCccEEEeecCC
Q psy12061 461 PDTKYYVKVMAYNN-----AG-EGPESERYLERTYRK 491 (626)
Q Consensus 461 p~t~Y~v~V~a~~~-----~g-~s~~s~~~~~~t~~~ 491 (626)
|++.|.|+|+|... .| .|++|....+.|.++
T Consensus 300 p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 300 ETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp ------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred CCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 99999999999953 23 267788888877644
No 98
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.91 E-value=9.2e-24 Score=209.58 Aligned_cols=170 Identities=23% Similarity=0.360 Sum_probs=148.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.|.|.|.+.|+|+|..+....+.....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 234 ~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 313 (404)
T 3p3y_A 234 VLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAP 313 (404)
T ss_dssp EETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEE
T ss_pred EecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCC
Confidence 45899999999999999999999999999987666555567789999999999999999999999998889999998888
Q ss_pred ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEE
Q psy12061 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161 (626)
Q Consensus 82 ~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a 161 (626)
.+.. .+.+..+.+|++++|.|.+.+.|.| .+.|+++|..+..... ..+....++.|.|.+++.+|+|.|+|.|
T Consensus 314 ~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~~----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 386 (404)
T 3p3y_A 314 YWLD-EPKNLILAPGEDGRLVCRANGNPKP--TVQWMVNGEPLQSAPP----NPNREVAGDTIIFRDTQISSRAVYQCNT 386 (404)
T ss_dssp EEEE-CCCCEEECTTCCEEEECEEEEESCC--EEEEEETTEEGGGSCC----CTTEEEETTEEEESSCCSSCCCEEEEEE
T ss_pred eeec-cCCcceeecCCcEEEEEEccccCCC--ceEEEECCEecCCCCC----CceEEecCCEEEEeecCHHHCEEEEEEE
Confidence 7665 5778899999999999999999877 4699999999876421 2344556789999999999999999999
Q ss_pred EeCCCceEEEEEEEEeC
Q psy12061 162 KSTVGKISTKTTVIVEG 178 (626)
Q Consensus 162 ~n~~g~~~~~~~l~v~~ 178 (626)
.|..|..+..+.|.|.+
T Consensus 387 ~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 387 SNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EETTEEEEEEEEEEEC-
T ss_pred EeCCCcEEEEEEEEEEe
Confidence 99999999999998764
No 99
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.91 E-value=1.2e-23 Score=184.65 Aligned_cols=167 Identities=17% Similarity=0.311 Sum_probs=135.3
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEe-CCEEcc-CCCcEEEcc----CCcEEEccCCCCCCEEEEEEEEcCCC-CceeeE
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKK-DGNIIG-SGGRRKIFE----NGNLLISPVSRDDSGIYSCTATNVHG-MDESKG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~-~~~~i~-~~~~~~~~~----~g~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~ 73 (626)
+.+|++++|.|.+.+.| .+.+.|+| ||..+. ...++.+.. +++|.|.+++.+|+|.|+|.|.|..| .....+
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 93 (191)
T 1epf_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATV 93 (191)
T ss_dssp EETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEE
T ss_pred EcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEE
Confidence 56899999999999987 78999999 998887 456666643 35799999999999999999999984 455667
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCCeEEEeecCCC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGGLLEITNASFA 152 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~ 152 (626)
.|.|..+|.+.. .|....+..|++++|.|.+.+.|.|. +.|++++..+.... ..++. ..++.|.|.+++.+
T Consensus 94 ~l~v~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~ 165 (191)
T 1epf_A 94 NVKIFQKLMFKN-APTPQEFKEGEDAVIVCDVVSSLPPT--IIWKHKGRDVILKK-----DVRFIVLSNNYLQIRGIKKT 165 (191)
T ss_dssp EEEEECCSEEEE-CCSSEECCTTSCEEECCEEECSSCCE--EEEEETTEEGGGGC-----CTTEEECTTSCEEETTCCGG
T ss_pred EEEeecCceEec-CCCcEeecCCCeEEEEEEECCCCCCE--EEEEECCEEeeccC-----CceEEEecCCeEEECCCChh
Confidence 888877776654 56788899999999999999998874 69999999986432 12333 35668999999999
Q ss_pred CCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 153 DAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
|+|.|+|.|.|..|.......+.|
T Consensus 166 d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 166 DEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp GCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred hCEEEEEEEEEecceeEEEEEEEE
Confidence 999999999999876555555544
No 100
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.91 E-value=2.4e-24 Score=185.08 Aligned_cols=153 Identities=17% Similarity=0.236 Sum_probs=122.1
Q ss_pred CCCCceEEEEeeeCC--CCCCeeEEEeCCEEcc----------CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEA--APKPKFVWKKDGNIIG----------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g--~p~p~i~W~~~~~~i~----------~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|...+ .|.|.|.|+|++..|. .++|+.+..+|+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 8 ~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~ 87 (176)
T 1hng_A 8 GALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTR 87 (176)
T ss_dssp EETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCE
T ss_pred EEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCE
Confidence 578999999996533 5677999999997652 4678889889999999999999999999999999986
Q ss_pred --eeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEe
Q psy12061 70 --ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 147 (626)
Q Consensus 70 --~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 147 (626)
...+.|.|..++.. ......+.+++|.|.+.+.|.| +|.|+++|..+.... .+.|.
T Consensus 88 ~~~~~~~l~V~~~~~~------p~i~~~~~~v~L~C~~~g~p~p--~i~W~~~g~~l~~~~--------------~~~i~ 145 (176)
T 1hng_A 88 ILNKALDLRILEMVSK------PMIYWECSNATLTCEVLEGTDV--ELKLYQGKEHLRSLR--------------QKTMS 145 (176)
T ss_dssp EEEEEEEEEEECCCCC------CEEEEETTTTEEEEECSSCSSC--EEEEEETTEEEEEES--------------SSEEE
T ss_pred EEEEEEEEEEeCCCCC------CEEEecCCcEEEEEEecCCCCc--EEEEEECCEECCCCC--------------cEEEE
Confidence 55678888664321 1122345679999999999876 569999999886531 25566
Q ss_pred ecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 148 NASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
++..+|+|.|+|.|.|..|..++.+.|.+
T Consensus 146 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 146 YQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEccCCeEEEEEEEecCCCceecccccC
Confidence 88899999999999999999888776654
No 101
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=9.3e-24 Score=208.80 Aligned_cols=165 Identities=22% Similarity=0.379 Sum_probs=141.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEc--cCC-cEEEccCCCCCCEEEEEEEEcCCCCcee-eEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIF--ENG-NLLISPVSRDDSGIYSCTATNVHGMDES-KGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~--~~g-~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l 75 (626)
+.+|+.++|.|.+.|.|.|.|.|+|+|..+... .++... .++ +|.|.+++.+|+|.|+|.|.|..|.... .+.|
T Consensus 224 ~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l 303 (395)
T 1bih_A 224 AKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKL 303 (395)
T ss_dssp EETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEE
T ss_pred EECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEE
Confidence 468999999999999999999999999998754 333322 123 6999999999999999999999999766 8899
Q ss_pred EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 76 IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 76 ~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
.|..+|.+...+.....+..|++++|.|.+.+.|.|. +.|+++|..+.. .++...++.|.|.+++.+|+|
T Consensus 304 ~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~--------~~~~~~~~~L~i~~~~~~d~G 373 (395)
T 1bih_A 304 TVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPN--VVWSHNAKPLSG--------GRATVTDSGLVIKGVKNGDKG 373 (395)
T ss_dssp EEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCC--CEEEETTEECCS--------SSEEEETTEEEESSCCSTTCE
T ss_pred EEEcCCccccCCCcceEecCCCeEEEEEEECcccCCe--eEEEECCEECCC--------CceEEECCEEEEeeCCcccCE
Confidence 9998888776544448899999999999999998875 589999999864 355566779999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEE
Q psy12061 156 EYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v 176 (626)
.|+|.|.|..|..+..+.|.|
T Consensus 374 ~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 374 YYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEccCCCceEEEEEEE
Confidence 999999999999999988876
No 102
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.91 E-value=4.5e-24 Score=210.43 Aligned_cols=246 Identities=17% Similarity=0.231 Sum_probs=170.6
Q ss_pred CCCCceEEEEeeeCCCCC---CeeEEEeCCEEccC-----CCcEEEccCCcEEEccCCCCCC-EEEEEEEEcCCCCcee-
Q psy12061 2 AGEGGNVTIFCNPEAAPK---PKFVWKKDGNIIGS-----GGRRKIFENGNLLISPVSRDDS-GIYSCTATNVHGMDES- 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~i~~-----~~~~~~~~~g~L~i~~v~~~d~-G~Y~C~a~n~~g~~~~- 71 (626)
+.+|++++|.|.+.+.|. +.|.|+|++..+.. +.|+.+..+++|.|.+++.+|+ |.|+|.|.|..+....
T Consensus 115 v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~ 194 (388)
T 2v5m_A 115 VIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRL 194 (388)
T ss_dssp EETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEE
T ss_pred eecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceee
Confidence 568999999999988753 79999999887632 5688888889999999999999 9999999998654322
Q ss_pred e---EEEEEEeC-----CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCe
Q psy12061 72 K---GRLIVLHG-----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL 143 (626)
Q Consensus 72 ~---~~l~v~~~-----p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (626)
. ..|.|..+ |.+.........+.+|++++|.|.+.+.|.| .+.|+|++..+.... ......++...++.
T Consensus 195 ~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (388)
T 2v5m_A 195 SATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAP--SFRWYKFIEGTTRKQ-AVVLNDRVKQVSGT 271 (388)
T ss_dssp CSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCC--EEEEEEECTTSSCEE-ECCCSSSEEEETTE
T ss_pred ccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCC--EEEEEecCCCCcccc-cccccCceecccCE
Confidence 1 35666554 3222223345678899999999999998877 468999854332110 00112345556789
Q ss_pred EEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCce-EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCC
Q psy12061 144 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWN 222 (626)
Q Consensus 144 l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~-~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~ 222 (626)
|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.....+ .........+.|.|.. ...+...
T Consensus 272 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~-------------~g~p~p~ 338 (388)
T 2v5m_A 272 LIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQY-------------TGNPIKT 338 (388)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEE-------------EEECCCE
T ss_pred EEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEe-------------ccccCCe
Confidence 9999999999999999999999999999999998765421100 1112233455555553 2222222
Q ss_pred CCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 223 ~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
..|.+.+..+. .....+.|.+ +...+.+.|+|.|.|..|..
T Consensus 339 i~W~~~g~~i~-------~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~ 379 (388)
T 2v5m_A 339 VSWMKDGKAIG-------HSESVLRIES-VKKEDKGMYQCFVRNDRESA 379 (388)
T ss_dssp EEEEETTEECS-------CCSSEEEESS-CCGGGCEEEEEEEECSSCEE
T ss_pred EEEEECCEECc-------cCCCEEEEec-CChhhCEEEEEEEEcCCCcE
Confidence 33444333221 1223556655 89999999999999999854
No 103
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.91 E-value=1.6e-23 Score=187.76 Aligned_cols=159 Identities=21% Similarity=0.353 Sum_probs=133.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCc-eeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD-ESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.+.|.|+|++..+... .+++|.|.+++.+|+|.|+|.|.|..|.. ...+.|.|...
T Consensus 30 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 30 VLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDI 103 (218)
T ss_dssp EETTSBEEEECEETTTTSSEEEEEETTEECTTC------CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECC
T ss_pred EeCCCcEEEEeeecCCCCCEEEEEECCEECCCC------CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEcc
Confidence 568999999999999999999999999998654 24679999999999999999999998865 45578888765
Q ss_pred C--------------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEE
Q psy12061 81 P--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 146 (626)
Q Consensus 81 p--------------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 146 (626)
| ..+...|....+..|++++|.|.+.+.|.| .+.|++++..+... ....|.|
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~--~v~W~~~~~~~~~~------------~~~~L~i 169 (218)
T 3k0w_A 104 PESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIP--HYQWFKNELPLTHE------------TKKLYMV 169 (218)
T ss_dssp CGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCC--EEEEEETTEECTTC------------CSSEEEE
T ss_pred CcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCC--eEEEEECCEECCCC------------CCCEEEE
Confidence 3 233445777899999999999999998876 56999999998653 2458999
Q ss_pred eecCCCCCEeEEEEEEeCCCc-eEEEEEEEEeCCC
Q psy12061 147 TNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPP 180 (626)
Q Consensus 147 ~~~~~~d~g~Y~C~a~n~~g~-~~~~~~l~v~~~P 180 (626)
.+++.+|+|.|+|.|.|..|. .+..+.|.|...+
T Consensus 170 ~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 170 PYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELN 204 (218)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEECCCEEEEECC--
T ss_pred eecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCc
Confidence 999999999999999998887 5677888887643
No 104
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=8.3e-24 Score=189.91 Aligned_cols=176 Identities=23% Similarity=0.439 Sum_probs=136.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC---CcEEEccCCcE----EEccCCCCCCEEEEEEEEcCCCCce-eeE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNL----LISPVSRDDSGIYSCTATNVHGMDE-SKG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~---~~~~~~~~g~L----~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~ 73 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+... .......++.+ .|.+++.+|+|.|+|.|.|..|... ..+
T Consensus 21 v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~ 100 (217)
T 2vr9_A 21 VKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHA 100 (217)
T ss_dssp ECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCE
T ss_pred EeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccc
Confidence 578999999999999999999999999998753 23334455554 6888999999999999999988763 357
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCCc-cCCCeeE-ecCCeEEEeecC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNE-LETPNIN-IDGGLLEITNAS 150 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~-~~~~~~~-~~~~~l~i~~~~ 150 (626)
.|.|...|..+...+....+..|++++|.|.+ .+.|.| .+.|+++|..+....... ....+.. ..++.|.|.+++
T Consensus 101 ~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 178 (217)
T 2vr9_A 101 SLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEP--TLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVE 178 (217)
T ss_dssp EEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCC--EEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCC
T ss_pred eEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCC--eEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCC
Confidence 77776644444445778889999999999999 888876 469999999987432111 0112332 366799999999
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeCC
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
.+|+|.|+|.|.|..|....+..+.+...
T Consensus 179 ~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 179 PIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp STTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred HHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 99999999999999999877766655543
No 105
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.91 E-value=4.6e-23 Score=181.95 Aligned_cols=186 Identities=21% Similarity=0.337 Sum_probs=146.6
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVK 468 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~ 468 (626)
.|. +|.++++...+.+++.|+|+++...+ +..+.+|.|+|+..+...+.... .......+.+.+|.|++.|.|+
T Consensus 5 ~P~-~P~~l~~~~~~~~sv~l~W~~p~~~~---~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~~L~p~t~Y~~~ 78 (197)
T 3lpw_A 5 TPG-PPQDLKVKEVTKTSVTLTWDPPLLDG---GSKIKNYIVEKRESTRKAYSTVA--TNCHKTSWKVDQLQEGCSYYFR 78 (197)
T ss_dssp SCC-CCEEEEEEEECSSCEEEEEECCSCCT---TSCCCEEEEEEEETTCSSCEEEE--EEECSSEEEECCCCTTCEEEEE
T ss_pred CCC-CCCCcEEEEecCCEEEEEEcCCccCC---CCcccEEEEEEEECCCCccEEee--cCCCccEEEEcCCCCCCEEEEE
Confidence 454 88999999999999999999985332 13488999999876654443322 2345567999999999999999
Q ss_pred EEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCC-CceeeEEEEEEEeccCCcccccee
Q psy12061 469 VMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE-EPIIGYKVRVWEVDQDMSRANDTI 547 (626)
Q Consensus 469 V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~-~~i~~Y~i~~~~~~~~~~~~~~~~ 547 (626)
|+|.|..|.+.++....+.+....|. +|.++.+...+.+++.|+|++ |...+ +.+.+|.|+|+..+... ...
T Consensus 79 V~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~--p~~~~~~~i~~Y~v~~~~~~~~~----~~~ 151 (197)
T 3lpw_A 79 VLAENEYGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEK--PEHDGGSRILGYIVEMQTKGSDK----WAT 151 (197)
T ss_dssp EEEEETTEECCCEECSSCEESCCCCC-CCSCEEEEEECSSCEEEEECC--CSCCTTSCCCEEEEEEEETTCSC----CEE
T ss_pred EEEEcCccccCCCCCccceecCCCCC-CCcccEEEeccCCeEEEEecC--CCcCCCCcccEEEEEEEeCCCCc----eEE
Confidence 99999999998887666677766554 788999988999999999994 44444 48999999988755432 223
Q ss_pred eecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcE
Q psy12061 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAI 587 (626)
Q Consensus 548 ~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~ 587 (626)
......+++.+.+|.|++.|.|+|+|.|..|.|++|.+..
T Consensus 152 ~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s~ 191 (197)
T 3lpw_A 152 CATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLSV 191 (197)
T ss_dssp EEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECSS
T ss_pred eecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCcc
Confidence 3345678899999999999999999999999999886543
No 106
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=7.8e-24 Score=187.69 Aligned_cols=166 Identities=24% Similarity=0.373 Sum_probs=134.2
Q ss_pred CCCCceEEEEee-eCCCCC-CeeEEEeCCEEcc--CCCcEEE-ccCCcEEEccCCCCCCEEEEEEEEcCCCCcee---eE
Q psy12061 2 AGEGGNVTIFCN-PEAAPK-PKFVWKKDGNIIG--SGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDES---KG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~-~~g~p~-p~i~W~~~~~~i~--~~~~~~~-~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~---~~ 73 (626)
+.+|++++|.|. +.+.|. +.|.|+|++..+. .+.+..+ ..+++|.|.+++.+|+|.|+|.|.|..+.... ..
T Consensus 20 v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~ 99 (201)
T 3s97_C 20 VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFI 99 (201)
T ss_dssp EETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCE
T ss_pred EECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhccc
Confidence 568999999999 899999 9999999998874 3334333 45678999999999999999999997766443 23
Q ss_pred EEEEE-------eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEE
Q psy12061 74 RLIVL-------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 146 (626)
Q Consensus 74 ~l~v~-------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 146 (626)
.+.+. .+|.+...+ ....+..|++++|.|.+.+.|.| .+.|++++..+... .++...++.|.|
T Consensus 100 ~~~~~~~~~~~~~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~-------~~~~~~~~~L~i 169 (201)
T 3s97_C 100 PLIPIPERTTKPYPADIVVQF-KDVYALMGQNVTLECFALGNPVP--DIRWRKVLEPMPST-------AEISTSGAVLKI 169 (201)
T ss_dssp EEEEECCSSCCCEEEEEEEEC-CCEEEETTCCEEEEEEEEEESCC--EEEEEETTBCCCTT-------CEEETTTTEEEE
T ss_pred ceeeccccccCCCCCceEecC-CceEEecCCcEEEEEEccCCCCC--ceEEEeCCCcCCCc-------eeecCCCCEEEE
Confidence 44443 234444443 48889999999999999999876 56999999977643 455556789999
Q ss_pred eecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 147 TNASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 147 ~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
.+++.+|+|.|+|.|.|..|..+..+.|.|+
T Consensus 170 ~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 170 FNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9999999999999999999999999998886
No 107
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.91 E-value=3.6e-23 Score=184.08 Aligned_cols=194 Identities=17% Similarity=0.139 Sum_probs=150.1
Q ss_pred CCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEE
Q psy12061 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 287 p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
++.+|.++.+...+. ++.|+|+++ ....+.++.+|.|+|+..+...|...............+.+.+|.|++.|.|+|
T Consensus 8 ~P~~P~~~~~~~~~~-s~~l~W~~p-~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 85 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS-TAQVQFDEP-EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRL 85 (209)
T ss_dssp CCCCCEEEEEEECSS-CEEEEEECC-SCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEE
T ss_pred CCcCCcccEeeeccC-eEEEEEcCC-CcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEE
Confidence 346789999988776 699999983 223344599999999988877886654332111223467899999999999999
Q ss_pred EEecCCCCCCCCccEEEEccCC-CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEE
Q psy12061 367 QAINDVGPGPESEVVTIFSAED-MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY 445 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~-~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~ 445 (626)
+|.|..|.|.+|....+.|... .|. +|..+.+...+.+++.|+|++|... ++.|.+|.|+|+. ....+....
T Consensus 86 ~A~n~~G~~~~s~~~~~~T~~~~~P~-~P~~~~~~~~~~~sv~l~W~~p~~~----~~~i~~Y~v~~~~-~~~~~~~~~- 158 (209)
T 2vkw_A 86 AALNGKGLGEISAASEFKTQPVREPS-APKLEGQMGEDGNSIKVNLIKQDDG----GSPIRHYLVRYRA-LSSEWKPEI- 158 (209)
T ss_dssp EEEETTEECCCCCCEEEECCCSCSCC-CCEEEEEECTTSSCEEEEEECCCCT----TSCCCEEEEEEEE-TTSCCCCCE-
T ss_pred EEEcCCcccCCcccccccccCCCCCC-CCcccccccccCCeEEEEEECcccC----CCCCceEEEEEEC-CCCCCceee-
Confidence 9999999999999988888766 455 7888888888899999999998432 3779999999988 333332222
Q ss_pred EecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeec
Q psy12061 446 LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489 (626)
Q Consensus 446 ~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~ 489 (626)
........+.+.+|+|++.|.|+|+|.|..|.|++|....+++.
T Consensus 159 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~ 202 (209)
T 2vkw_A 159 RLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAA 202 (209)
T ss_dssp EECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC-
T ss_pred ecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhh
Confidence 23445567999999999999999999999999999987766554
No 108
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=9.1e-24 Score=212.53 Aligned_cols=244 Identities=14% Similarity=0.094 Sum_probs=163.3
Q ss_pred CCCCceEEEEeeeCCCCCCee-----EEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKF-----VWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i-----~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.| |.|.+ .|+|++..+.. .+.. .|.|.+++. |+| |+|.|.|..+.....+.|.
T Consensus 11 v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~-~~~~-----~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~ 81 (450)
T 1z7z_I 11 LPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG-NNRK-----VYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLT 81 (450)
T ss_dssp EETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST-TTEE-----EEEEEEECS-CBC-CEEEEEETTEEEEEECEEE
T ss_pred EecCCcEEEEEEccC-CCcccccccceeeecceEecC-CCce-----EEEEEeccc-CCe-eEEEEeCCCCcceeEEEEE
Confidence 568999999999999 99998 99999876643 2222 589999987 999 9999987766677788999
Q ss_pred EEeCCceeeeCCCceEEecCCcEEEEEEecccCCc-ceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 77 VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 77 v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
|..+|.++...+.+..+.+|++++|.|.+.+.|++ .+.|.|+|+|..+....... ...++.|.|.++..+|+|
T Consensus 82 V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~------~~~~~~L~i~~~~~~d~G 155 (450)
T 1z7z_I 82 VYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG------EPAEVTTTVLVRRDHHGA 155 (450)
T ss_dssp EEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT------TTEEEEEEEECCSSCSSC
T ss_pred EEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc------cccceEEEEEeeccccCc
Confidence 99999888777788899999999999999998765 34679999999987543110 112358999999999999
Q ss_pred eEEEEEEeCCCceE--------EEEEEEEeCCC-CCCCceE-EEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCc
Q psy12061 156 EYECVVKSTVGKIS--------TKTTVIVEGPP-GLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~--------~~~~l~v~~~P-~~p~~~~-~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w 225 (626)
.|+|.|.|..|... ....+.+...| .+|.... ........+.|.|..... .+.....+.+...+.
T Consensus 156 ~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~--~P~~~~~~~W~~~~~--- 230 (450)
T 1z7z_I 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGL--FPVSEAQVHLALGDQ--- 230 (450)
T ss_dssp EEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESC--TTGGGCEEEEEETTE---
T ss_pred eEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCC--CCCCceEEEEeCCCE---
Confidence 99999999977532 44566666552 3332200 123345667777764321 121122233332221
Q ss_pred eEeecceeeeeeeccCCceeEEEEeeccCCceE--EEEEEEecCCccC
Q psy12061 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY--EFKVIAGNELGYG 271 (626)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y--~~~v~a~n~~g~~ 271 (626)
.+... .............-.+...+.+ .|+|.|.|..|..
T Consensus 231 -----~~~~~-~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~ 272 (450)
T 1z7z_I 231 -----RLNPT-VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ 272 (450)
T ss_dssp -----ECCCE-EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEE
T ss_pred -----eCCce-EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccE
Confidence 11100 0000111111111125677766 9999999998754
No 109
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.91 E-value=3.1e-23 Score=210.14 Aligned_cols=247 Identities=9% Similarity=0.004 Sum_probs=143.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
|.+|++++|.|.+.+.|...+.|++++..+.....+.....+ +|.|.+|+.+|+|.|+|.|.|..+.......|.|.
T Consensus 60 v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~- 138 (527)
T 3qs9_E 60 VDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIR- 138 (527)
T ss_dssp ECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-
T ss_pred EeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEEC-
Confidence 579999999999999888999999999987543322221112 49999999999999999999998876666666653
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYEC 159 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C 159 (626)
|.++..+........|+.+.|.|.+.|.|.|. |.|++++..+.... ......+ ......+...|+|.|+|
T Consensus 139 -~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~--i~W~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~d~G~Y~C 208 (527)
T 3qs9_E 139 -NTLLYTLRRPYFRKMENQDALVCISESVPEPI--VEWVLCDSQGESCK--EESPAVV-----KKEEKVLHELFGTDIRC 208 (527)
T ss_dssp ------CEEEEEEEECSSSSCEEEEEEESSCCE--EEEEEC---------------CE-----EECCSEECCCCSSCEEE
T ss_pred -CceeeccCCCcEEecCCceEEEEEEceecCCe--EEEEECCCCCcccc--ccCCcEE-----EEeeeeccccCCEEEEE
Confidence 33332233344556788899999999999885 58999887664211 0000111 11223345789999999
Q ss_pred EEEeCCCceEEE-EEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeeee
Q psy12061 160 VVKSTVGKISTK-TTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVD 238 (626)
Q Consensus 160 ~a~n~~g~~~~~-~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~ 238 (626)
.|.|..|..... +.|.|..+|..|.. .........+.|.|.... +.+. ..|.|...+...- ...........
T Consensus 209 ~A~N~~G~~~~~~~~l~V~~~p~~~p~-~~~v~~G~~v~L~C~~~~--g~p~--p~i~W~k~g~~l~--~~~~~~~~~~~ 281 (527)
T 3qs9_E 209 CARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVH--VNHG--FGLTWELENKALE--EGNYFEMSTYS 281 (527)
T ss_dssp EEECSSCEEEEECEEEESSSCCCCSCC-EEEECTTSCEEEEEEEEE--SSSC--CCEEEECSSSCCC--GGGEEEEEEEE
T ss_pred EEEeCCCcccceEEEEEEeccCccCCC-ceEEeCCCeEEEEEEEcc--CCCC--eEEEEEECCEECC--CCceeeeeeec
Confidence 999999987654 77888776653321 222334455666665421 1111 1122222211000 00000000000
Q ss_pred --c-cCCceeEEEEeeccCCceEEEEEEEecC
Q psy12061 239 --R-YTGRKEASIENVLVPWSTYEFKVIAGNE 267 (626)
Q Consensus 239 --~-~~~~~~~~i~~~l~~~~~y~~~v~a~n~ 267 (626)
. ......+.|.+ +...+.+.|+|.|.|.
T Consensus 282 ~~~~~~~~~~L~I~~-v~~~DsG~Y~C~a~N~ 312 (527)
T 3qs9_E 282 TNRTMIRILFAFVSS-VARNDTGYYTCSSSKH 312 (527)
T ss_dssp TTTEEEEEEEEEESS-CCGGGCEEEEEEETTE
T ss_pred cCcceeeEEEEEEcc-CCcccCeEEEEEEEeC
Confidence 0 00112355555 8999999999999997
No 110
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.91 E-value=2.4e-23 Score=199.58 Aligned_cols=173 Identities=21% Similarity=0.286 Sum_probs=136.3
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEeCCEEccC-CCcEEEccCCcEEEccCCCCCCEEEEEEEEcC--CCCceee----E
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGS-GGRRKIFENGNLLISPVSRDDSGIYSCTATNV--HGMDESK----G 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~i~~-~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~--~g~~~~~----~ 73 (626)
+.+|++++|.|.+.|.| .|.|.|+|++..+.. +.++... +++|.|.+++.+|+|.|+|.|.|. .|..... +
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~ 218 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCK 218 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEE
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeE
Confidence 56899999999999999 899999999999963 4455544 788999999999999999999997 6654443 7
Q ss_pred EEEEEeCC----ceeeeCCCceEEecCCcEEEEEEecccC--CcceeEEEeeCCEEeccccCCccCC--CeeEecCCeEE
Q psy12061 74 RLIVLHGP----SYYEQLPPKITIAAHRNLQLRCSAHTEE--LLDVAYIWTHNGVRIGNMDLNELET--PNINIDGGLLE 145 (626)
Q Consensus 74 ~l~v~~~p----~~~~~~~~~~~v~~g~~~~l~C~~~~~p--~p~~~i~W~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ 145 (626)
.|.|..+| +.+ .|....+..|++++|.|.+.+.| .+.+.+.|+++|..+.......... .+.....+.|.
T Consensus 219 ~l~V~~~~~~~~~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~ 296 (329)
T 3oq3_B 219 ILTVIPSQDHRFKLI--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLY 296 (329)
T ss_dssp EEEEECCCCCCEEEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCCCCcee--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEE
Confidence 78887776 333 56778999999999999999998 3335779999998853322100000 00011467899
Q ss_pred EeecCCCCCE-eEEEEEEeCCCceEEEEEEEEe
Q psy12061 146 ITNASFADAG-EYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 146 i~~~~~~d~g-~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
|.+++.+|+| .|+|.|.|..|..+..+.|.|.
T Consensus 297 I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 297 FENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp ESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 9999999999 9999999999999988888763
No 111
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.91 E-value=1.1e-24 Score=207.96 Aligned_cols=167 Identities=17% Similarity=0.179 Sum_probs=130.5
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEeCCEEcc----CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIG----SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~i~----~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
|.+|++++|.|.+.|.| .|.|.|+|+|..+. ...|+... +++|.|.+++.+|+|.|+|.|.|..|.......+.
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~ 95 (315)
T 1itb_B 17 SSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH-KEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAK 95 (315)
T ss_dssp EETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC-SSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCE
T ss_pred EcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc-CCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEE
Confidence 67999999999999987 78999999987532 34555543 56899999999999999999999998877776666
Q ss_pred EEeCCceeeeCC---CceEEecCCcEEEEEEe------cccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEe
Q psy12061 77 VLHGPSYYEQLP---PKITIAAHRNLQLRCSA------HTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT 147 (626)
Q Consensus 77 v~~~p~~~~~~~---~~~~v~~g~~~~l~C~~------~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 147 (626)
+...++.+...+ ....+..|++++|.|.+ .+.|.|. +.|+|++..+.... .++...++.|.|.
T Consensus 96 v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~--i~W~k~~~~l~~~~------~~~~~~~~~L~i~ 167 (315)
T 1itb_B 96 FVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPK--LQWYKDCKPLLLDN------IHFSGVKDRLIVM 167 (315)
T ss_dssp EECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCC--CEEEETTEECCCCS------SSEEEETTEEEES
T ss_pred EeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCE--EEEEECCEECCCcc------ceEeecCceEEEE
Confidence 655333322112 24678899999999998 7787764 58999999986543 4556678899999
Q ss_pred ecCCCCCEeEEEEEE-eCCCce---EEEEEEEEe
Q psy12061 148 NASFADAGEYECVVK-STVGKI---STKTTVIVE 177 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~-n~~g~~---~~~~~l~v~ 177 (626)
+++.+|+|.|+|.|. |..|.. ...+.+.+.
T Consensus 168 ~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~ 201 (315)
T 1itb_B 168 NVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL 201 (315)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred eceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEe
Confidence 999999999999999 788876 344445444
No 112
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.91 E-value=1.4e-23 Score=180.87 Aligned_cols=155 Identities=20% Similarity=0.318 Sum_probs=125.5
Q ss_pred CCCCceEEEEeeeCCCCCCe-eEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-FVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.+.|.+. +.|+|+|..+.. .+++|.|.+++.+|+|.|+|.|.|..+ ...+.|.|..+
T Consensus 19 v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~-------~~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~~~ 89 (175)
T 1fnl_A 19 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS-------QASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVHIG 89 (175)
T ss_dssp EETTCCEEEEEECCCBTTBCCCEEEETTEEEES-------SCSEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEECS
T ss_pred eeCCCcEEEEeeCCCCCCCcceEEEECCEEccC-------CceEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEeCC
Confidence 56899999999999998875 889999988853 356799999999999999999998554 45678888765
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|..+. + ....+.+|++++|.|.+.+.+++ .++.|+|+|..+... .....|.|.+++.+|+|.|+|.
T Consensus 90 ~~~~~-~-~~~~~~~g~~~~l~C~~~~~~~~-~~~~W~k~g~~~~~~-----------~~~~~L~i~~v~~~d~G~Y~C~ 155 (175)
T 1fnl_A 90 WLLLQ-A-PRWVFKEEDPIHLRCHSWKNTAL-HKVTYLQNGKDRKYF-----------HHNSDFHIPKATLKDSGSYFCR 155 (175)
T ss_dssp SEEEE-C-SCSEEETTCCEEEEEEECTTCCC-EEEEEEETTEEEEEE-----------EECCCEEESSCCGGGCEEEEEE
T ss_pred Cceee-C-CCceecCCCCEEEEEEcCCCCCc-eEEEEEECCeEccCC-----------CCCCEEEEcccChhhCeEEEEE
Confidence 55443 2 34678899999999999988765 477999999988532 2467899999999999999999
Q ss_pred EEeCCCc-eEEEEEEEEeCC
Q psy12061 161 VKSTVGK-ISTKTTVIVEGP 179 (626)
Q Consensus 161 a~n~~g~-~~~~~~l~v~~~ 179 (626)
|.|..|. .+..+.|.|.++
T Consensus 156 a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 156 GLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp EEETTEEEECCCEEEEEECC
T ss_pred EEcCCCCccCccEEEEEeCC
Confidence 9997654 566778877653
No 113
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.91 E-value=1e-23 Score=189.11 Aligned_cols=169 Identities=20% Similarity=0.314 Sum_probs=135.9
Q ss_pred CCCCceEEEEeeeCCCC----CCeeEEEe----------------CCEEccC-----CCcEEEcc------CCcEEEccC
Q psy12061 2 AGEGGNVTIFCNPEAAP----KPKFVWKK----------------DGNIIGS-----GGRRKIFE------NGNLLISPV 50 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p----~p~i~W~~----------------~~~~i~~-----~~~~~~~~------~g~L~i~~v 50 (626)
|.+|++++|.|.+.+.| .+.|.|+| ++..+.. .+|..+.. +++|.|.++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v 91 (214)
T 3jz7_A 12 KAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTNL 91 (214)
T ss_dssp EETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECSC
T ss_pred EecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEccC
Confidence 57899999999999887 46999998 5555542 46777764 457999999
Q ss_pred CCCCCEEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCC--EEeccc
Q psy12061 51 SRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNG--VRIGNM 127 (626)
Q Consensus 51 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~--~~~~~~ 127 (626)
+.+|+|.|+|.|.|..|.....+.|.|..+|.+... +....+..|++++|.|.+ .+.|.| .+.|++++ ..+...
T Consensus 92 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~v~l~C~~~~g~p~~--~v~W~~~~~~~~~~~~ 168 (214)
T 3jz7_A 92 QLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRC-FVDGSEEIGNDFKLKCEPKEGSLPL--QFEWQKLSDSQTMPTP 168 (214)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEE-EEESCCBTTCCEEEEEECSBCCSSC--EEEEEECSTTCCCCGG
T ss_pred ChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCcee-eeecceecCCcEEEEecCCCCCCCC--EEEEEECCCCCccCcc
Confidence 999999999999999998888899999888876543 333447899999999999 788876 56999954 333322
Q ss_pred cCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 128 DLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
......++.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..||
T Consensus 169 -------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P~ 214 (214)
T 3jz7_A 169 -------WLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVPPS 214 (214)
T ss_dssp -------GGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBCCC
T ss_pred -------ceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeCCC
Confidence 2223356799999999999999999999999999999999888543
No 114
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.91 E-value=5.4e-24 Score=210.01 Aligned_cols=173 Identities=12% Similarity=0.136 Sum_probs=128.2
Q ss_pred CCCCceEEEEeeeCC-CCCCeeEEEeCCEEccCCCcE---------EEccCCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 2 AGEGGNVTIFCNPEA-APKPKFVWKKDGNIIGSGGRR---------KIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~i~~~~~~---------~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+.+|++++|.|.+.| .|.|.|.|+|+|..+...... ....+++|.|.+++.+|+|.|+|.|.|. ...
T Consensus 239 v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~ 315 (423)
T 3qs7_E 239 LKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQ 315 (423)
T ss_dssp EETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEE
T ss_pred EeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCc
Confidence 568999999999999 677999999999988543222 1222347999999999999999999998 677
Q ss_pred eEEEEEEeCCceeeeCC-CceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecC
Q psy12061 72 KGRLIVLHGPSYYEQLP-PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 150 (626)
.+.|.|..+|.+...+. ....+.+|+++.|.|.+.+.|.| .|.|+|||..+.... +.......+.+....
T Consensus 316 ~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p--~i~W~k~g~~l~~~~-------~~~~~~~~~~~~~~~ 386 (423)
T 3qs7_E 316 SALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI--RCTWTFSRKSFPCEQ-------KGLDNGYSISKFCNH 386 (423)
T ss_dssp EEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCC--EEEEEETTEEEECBC-------CBCSSSSEEEEECCC
T ss_pred eEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCC--eEEEEECCEECCCcc-------ccccCCcEEEEEecc
Confidence 88999988876644332 45778899999999999999987 569999999997542 000112233336677
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCce
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV 186 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~ 186 (626)
.+|+|.|+|.|.|..|..+.++.|.|...|.+|..+
T Consensus 387 ~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~~~~ 422 (423)
T 3qs7_E 387 KHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHHHHH 422 (423)
T ss_dssp TTCCSCEEEEEEETTEEEEEEEEEC-----------
T ss_pred cccCEEEEEEEEcCCceEEEEEEEEEecCCcccccC
Confidence 899999999999999999999999999999988653
No 115
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=199.97 Aligned_cols=172 Identities=26% Similarity=0.448 Sum_probs=132.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC---CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceee-EEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG---GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~---~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+... .++....++.|.|.+++.+|+|.|+|.|.|..|..... +.|.|
T Consensus 120 v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 199 (304)
T 2yd9_A 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYV 199 (304)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEE
Confidence 457999999999999999999999999998643 36667778899999999999999999999999876654 66666
Q ss_pred Ee--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 78 LH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 78 ~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
.. .|+.+...|....+.+|++++|.|.+.+.|.|. +.|+++|..+.... +.......|.|.++ +|+|
T Consensus 200 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~--v~W~~~~~~l~~~~-------~~~~~~~~L~i~~~--~d~G 268 (304)
T 2yd9_A 200 RVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY--VKWMQGAEDLTPED-------DMPVGRNVLELTDV--KDSA 268 (304)
T ss_dssp ECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCE--EEEEETTEECSCSS-------SCCBSEEEEEECSC--CSCE
T ss_pred EeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCE--EEEEECCEECCCcc-------cccCCcEEEEEccc--ccCE
Confidence 42 233344456778899999999999999998874 68999999987542 22223334666665 6999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCCCCCC
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPPGLPG 184 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 184 (626)
.|+|.|.|..|..+..+.|.|..++..-.
T Consensus 269 ~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~ 297 (304)
T 2yd9_A 269 NYTCVAMSSLGVIEAVAQITVKSLPKAGT 297 (304)
T ss_dssp EEEEEEEETTEEEEEEEEEC---------
T ss_pred EEEEEEEeCCCcEEEEEEEEEecCccccc
Confidence 99999999999999999999988775443
No 116
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.91 E-value=7.8e-23 Score=182.84 Aligned_cols=192 Identities=15% Similarity=0.160 Sum_probs=141.9
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-ccceEE--EE--------ecCccceEEEeCCcc
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVY--YL--------SRTTRNWALIVGLQP 461 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~--~~--------~~~~~~~~~i~~L~p 461 (626)
+|.++++...+.+++.|+|+++...+ +.+.+|.|+|+..+.. .+.... .. .......+.+.+|+|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~----~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 79 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDG----LPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKP 79 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSS----CCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCT
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCC----CCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcC
Confidence 67777888889999999999987543 6799999999876542 221100 00 012345689999999
Q ss_pred CceEEEEEEEeeCCCCCCCCc-cEEEeecCC---CCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEec
Q psy12061 462 DTKYYVKVMAYNNAGEGPESE-RYLERTYRK---APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVD 537 (626)
Q Consensus 462 ~t~Y~v~V~a~~~~g~s~~s~-~~~~~t~~~---~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~ 537 (626)
++.|.|+|+|.|..|.|..+. ...+.+... .|+.+|.++.+...+.+++.|+|+++. .+.++.|.+|.|+|+..+
T Consensus 80 ~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~ 158 (214)
T 2ibg_A 80 QHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSS 158 (214)
T ss_dssp TCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETT
T ss_pred CCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECC
Confidence 999999999999999876665 333444433 244478888888889999999999533 467899999999988765
Q ss_pred cCCcccccee-eecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 538 QDMSRANDTI-IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 538 ~~~~~~~~~~-~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
.... .... ......+.+.|.+|.|++.|.|+|+|+|..|.|++|.+. .++|.
T Consensus 159 ~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~ 211 (214)
T 2ibg_A 159 SAGE--YFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALK-QGRTQ 211 (214)
T ss_dssp CCSC--CEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCE-EEECC
T ss_pred CCcc--eEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceE-eeEec
Confidence 4211 2222 223346889999999999999999999999999999654 45554
No 117
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.91 E-value=5.7e-22 Score=188.09 Aligned_cols=283 Identities=11% Similarity=0.060 Sum_probs=180.5
Q ss_pred CCCCCceEEEEEeccceEEEEecCCCC-CCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceE
Q psy12061 180 PGLPGGVQVVEVHKTSATIQWTDGATN-GRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTY 258 (626)
Q Consensus 180 P~~p~~~~~~~~~~~~~~l~W~~~~~~-~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y 258 (626)
..||.++++.....+++.|+|++|... .....+|.+.+.. .|... . . .....+.. +.++..|
T Consensus 4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~----~~~~~---~--------~-~~~~~~~~-~~~~~~y 66 (314)
T 3bpo_C 4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGD----KQDKK---I--------A-PETRRSIE-VPLNERI 66 (314)
T ss_dssp CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC------CCCE---E--------E-SSSEEEEE-CCCSSCE
T ss_pred CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecc----cCceE---e--------c-cccEEEEE-EcCCCcE
Confidence 468899999888889999999997654 3556788887643 23110 0 0 11233334 8999999
Q ss_pred EEEEEEec-CCccCCCCCCCC-cccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcce
Q psy12061 259 EFKVIAGN-ELGYGEPSSPSP-QYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQ 336 (626)
Q Consensus 259 ~~~v~a~n-~~g~~~~s~~~~-~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~ 336 (626)
.++|+|.+ ..|.+.++.... .+.+....|+.+|.++.........+.++|+++ .+. +.+..|.|.|+..+...+.
T Consensus 67 ~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~--~~~-~~~~~Y~l~y~~~~~~~~~ 143 (314)
T 3bpo_C 67 CLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPG--RNT-SPDTNYTLYYWHRSLEKIH 143 (314)
T ss_dssp EEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECC--C----CCCCEEEEEEESSCSSCE
T ss_pred EEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCC--CCC-CCCccEEEEEEeCCCCccc
Confidence 99999964 455555554432 122455667788999999887888999999983 222 4578999999876544444
Q ss_pred eeeeeeecceeeEEEEeCCCc----ceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEee
Q psy12061 337 SETLKEYGNVGIAVVRIPSEF----YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWN 412 (626)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~----p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~ 412 (626)
.+..... ......+.+..+. ..+.|.|+|.|.|..|.+..+ ...+.+...+.+.+|.++++. ...+++.|+|+
T Consensus 144 ~C~~~~~-~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~~~~~~v~P~pP~~l~~~-~~~~~l~lsW~ 220 (314)
T 3bpo_C 144 QCENIFR-EGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIVPLTSRVKPDPPHIKNLS-FHNDDLYVQWE 220 (314)
T ss_dssp ECCCEEE-ETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEECSSSSEECCCCEEEEEE-EETTEEEEEEE
T ss_pred cCcCeec-CCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEEehhheEeeCCCCEEEEE-EcCCcEEEEEe
Confidence 3321111 1122344454443 478999999999999887644 344544443333489999987 77889999999
Q ss_pred eccccccccceeeEEEEEEEEecCCCccceEEEE-----------ecCccceEEEeCCccCceEEEEEEEeeC------C
Q psy12061 413 PIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL-----------SRTTRNWALIVGLQPDTKYYVKVMAYNN------A 475 (626)
Q Consensus 413 ~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~v~V~a~~~------~ 475 (626)
+|.... +.+.+|.|+|+..+...+...... .......+.+.+|+|++.|.|+|+|.+. .
T Consensus 221 ~P~~~~----~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~ 296 (314)
T 3bpo_C 221 NPQNFI----SRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDD 296 (314)
T ss_dssp CCTTCC----GGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCC
T ss_pred CCCccC----CceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCC
Confidence 986422 336899999987765543321110 1134567899999999999999999985 4
Q ss_pred C-CCCCCccEEEeec
Q psy12061 476 G-EGPESERYLERTY 489 (626)
Q Consensus 476 g-~s~~s~~~~~~t~ 489 (626)
| .|.+|..+.+.+.
T Consensus 297 g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 297 KLWSNWSQEMSIGKK 311 (314)
T ss_dssp CCCCCCCCCEEESCC
T ss_pred CeeCCCCCCeEeccc
Confidence 5 3677877777554
No 118
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=197.36 Aligned_cols=172 Identities=20% Similarity=0.295 Sum_probs=135.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc--CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce--eeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE--SKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~--~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~v 77 (626)
+.+|+.++|.|.+.|.|.|.+.|+|++..+. ...++.+..+++|.|.+++.+|+|.|+|.|.|..+... ....+.|
T Consensus 110 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v 189 (291)
T 2wim_A 110 FKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 189 (291)
T ss_dssp EETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred hcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEe
Confidence 4689999999999999999999999999886 36788888889999999999999999999999886533 3456777
Q ss_pred EeCCceeeeCCC-ceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 78 LHGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 78 ~~~p~~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
..+|.+...+.. ...+..|++++|.|.+.+.|.|. +.|+++|..+..... ..+...++.|.|.++..+|+|.
T Consensus 190 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~ 262 (291)
T 2wim_A 190 NVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA--ISWFRNGKLIEENEK-----YILKGSNTELTVRNIINSDGGP 262 (291)
T ss_dssp EBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCE--EEEEETTEECCCTTT-----EEECSTTCEEEEESCCSTTCEE
T ss_pred ccCCccccCcccccceecCCCeEEEEEEeecCCCCe--EEEEECCEECcCCcc-----EEEcCCccEEEEeeCCcccCEE
Confidence 677766543221 45678999999999999998774 699999999875421 1122245789999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
|+|.|.|..|..+.++.|.|..++
T Consensus 263 Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 263 YVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEECCCceeeeEEEEEEEec
Confidence 999999999999999999988765
No 119
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.90 E-value=1.6e-22 Score=192.82 Aligned_cols=255 Identities=18% Similarity=0.157 Sum_probs=173.7
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++|+|.|.+.+.| .+.|.|++++..+..........+++|.|.+++..|+|.|+|.+ .|.....+.|.|..+
T Consensus 18 ~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~~~~~~L~V~~p 94 (325)
T 1n26_A 18 SLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVDVP 94 (325)
T ss_dssp ECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEES---SSSCSCEEEEEECCC
T ss_pred CCCCCcEEEEeCCCCCCCCceEEEEECCccCCccccccccccceEEecccchhhCeEeEEEe---CCEEeeeEEEEeccC
Confidence 35899999999998765 68999999887763322223345688999999999999999993 677788899999877
Q ss_pred CceeeeCCCceEEe-cCCcEEEEEEecccCC--c--ceeEEEeeC-CE---EeccccCCccCCCee-EecCCeEEEeecC
Q psy12061 81 PSYYEQLPPKITIA-AHRNLQLRCSAHTEEL--L--DVAYIWTHN-GV---RIGNMDLNELETPNI-NIDGGLLEITNAS 150 (626)
Q Consensus 81 p~~~~~~~~~~~v~-~g~~~~l~C~~~~~p~--p--~~~i~W~~~-~~---~~~~~~~~~~~~~~~-~~~~~~l~i~~~~ 150 (626)
|. .|. +.+. .+...+|.|.+..... + ...+.+.+. +. ...... ... ......+.|..+.
T Consensus 95 P~----~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c------~~~~~~~~~~c~i~~~~ 163 (325)
T 1n26_A 95 PE----EPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPC------QYSQESQKFSCQLAVPE 163 (325)
T ss_dssp CC----CCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEE------EEETTTTEEEEEECCCT
T ss_pred CC----CCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccC------CCCCCCCCEEEEECCCc
Confidence 64 333 5554 4655577787764321 1 122333332 11 100000 000 0112356676654
Q ss_pred -CCCCEeEEEEEEeCCCceEE-EEEEE--EeCCCCCCCceEEEEEec--cceEEEEecCCC--CCCcccEEEEEEeecCC
Q psy12061 151 -FADAGEYECVVKSTVGKIST-KTTVI--VEGPPGLPGGVQVVEVHK--TSATIQWTDGAT--NGRPITHYKIIARTNWN 222 (626)
Q Consensus 151 -~~d~g~Y~C~a~n~~g~~~~-~~~l~--v~~~P~~p~~~~~~~~~~--~~~~l~W~~~~~--~~~~~~~y~v~~~~~~~ 222 (626)
....+.++|.|.|..|.... ...+. ...+|.+|.++.+..... +++.|+|++|.. .+..+..|.|+|+..+.
T Consensus 164 ~~~~~Y~f~v~A~N~~G~~~s~~~~~~~~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~ 243 (325)
T 1n26_A 164 GDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERS 243 (325)
T ss_dssp TCCCEEEEEEEEEETTEEEECCCEEEETTTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTC
T ss_pred ccCcEEEEEEEEEcCCCCcccCcEEEeeccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCC
Confidence 45677889999999997532 23332 235799999999877643 689999999865 45567999999999888
Q ss_pred CCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcc
Q psy12061 223 STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQY 280 (626)
Q Consensus 223 ~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~ 280 (626)
..|..+... .....+.+.+ |.+++.|.|+|+|.|..|.+.+|..+..+
T Consensus 244 ~~W~~~~~~---------~~~~~~~l~~-L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~ 291 (325)
T 1n26_A 244 KTFTTWMVK---------DLQHHCVIHD-AWSGLRHVVQLRAQEEFGQGEWSEWSPEA 291 (325)
T ss_dssp SCCEEEECG---------GGCSEEEESS-CCTTCCEEEEEEEEETTTBSCCCCCCCCE
T ss_pred CCCEEEccc---------CCceEEEEeC-CCCCCeEEEEEEEecCCCCCCCcCCCCcc
Confidence 889765421 1123455544 99999999999999999988777765433
No 120
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.90 E-value=3.1e-23 Score=178.97 Aligned_cols=157 Identities=24% Similarity=0.285 Sum_probs=123.5
Q ss_pred CCCCceEEEEeeeCCCCCC-eeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.+.|.| .+.|+|++..+... +++|.|.+++.+|+|.|+|.|.|..+ ...+.|.|..+
T Consensus 16 v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~~~~~~~--s~~~~l~V~~~ 86 (176)
T 1f2q_A 16 IFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET-------NSSLNIVNAKFEDSGEYKCQHQQVNE--SEPVYLEVFSD 86 (176)
T ss_dssp EETTCCEEEECCTTCC----CCEEEETTEECSCC-------SSEEEECSCCGGGCEEEEEECTTSSC--CCCEEEEEECS
T ss_pred eecCCcEEEEEeCCCCCCcceEEEEECCeECCCC-------ceEEEEeccceecCEEEEEEcCCccc--cccEEEEEeCc
Confidence 5689999999999999886 79999999988642 56799999999999999999988654 45577777755
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
+..... ....+.+|++++|.|.+.+.+++ ..+.|+|+|..+.... .++.|.|.+++.+|+|.|+|.
T Consensus 87 ~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~ 152 (176)
T 1f2q_A 87 WLLLQA--SAEVVMEGQPLFLRCHGWRNWDV-YKVIYYKDGEALKYWY-----------ENHNISITNATVEDSGTYYCT 152 (176)
T ss_dssp SEEEEE--SCSEEETTSCEEEEEEEGGGCCE-EEEEEEETTEECCSCC-----------CSSEEEESSCCGGGCEEEEEE
T ss_pred ceeecC--CcceeeCCCCEEEEEEecCCCCc-eEEEEEECCEEEeeec-----------CCCeEEECCCCcccCEEEEEE
Confidence 544433 33578899999999999644332 4679999999885321 457899999999999999999
Q ss_pred EEeCCC-ceEEEEEEEEeCCCC
Q psy12061 161 VKSTVG-KISTKTTVIVEGPPG 181 (626)
Q Consensus 161 a~n~~g-~~~~~~~l~v~~~P~ 181 (626)
|.|..+ ..+..+.|.|..+|.
T Consensus 153 a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 153 GKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEETTEEEECCCEEEEEECSCC
T ss_pred EEeCCcceEecCEEEEEecCCC
Confidence 999644 456678999988875
No 121
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.90 E-value=6.9e-23 Score=194.56 Aligned_cols=269 Identities=10% Similarity=0.063 Sum_probs=169.9
Q ss_pred CCCCceEEEEeeeCCC-----CCCeeEEEeCCEEccCCCcEEEccC----CcEEEccCCCCCCEEEEEEEEcCCCCceee
Q psy12061 2 AGEGGNVTIFCNPEAA-----PKPKFVWKKDGNIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGMDESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-----p~p~i~W~~~~~~i~~~~~~~~~~~----g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 72 (626)
|..|++++|.|.+.++ |.|.|.|++||..|.. +++....+ +.|.|.+++.+|+|.|+|.|.+..+.....
T Consensus 12 v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~~~~ 90 (313)
T 2d9q_B 12 VHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQILDQ 90 (313)
T ss_dssp ECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEEEEE
T ss_pred EcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCceeEEE
Confidence 5789999999999997 6789999999998854 33333333 359999999999999999997655555556
Q ss_pred EEEEEEeCCceeeeCCCceEEecC-CcEEEEEEecccCCc----ceeEEEeeCCEEeccccCCccCCCee--EecCCeEE
Q psy12061 73 GRLIVLHGPSYYEQLPPKITIAAH-RNLQLRCSAHTEELL----DVAYIWTHNGVRIGNMDLNELETPNI--NIDGGLLE 145 (626)
Q Consensus 73 ~~l~v~~~p~~~~~~~~~~~v~~g-~~~~l~C~~~~~p~p----~~~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 145 (626)
+.|.|..+|. +|.++.+..- ..-++.|.+...... ...+.+.+.+....... ...... ........
T Consensus 91 ~~l~v~~~P~----~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 163 (313)
T 2d9q_B 91 VELRAGYPPA----IPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQG---DSILDCVPKDGQSHCS 163 (313)
T ss_dssp EEEEECCCCC----CCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCC---CCEEEECCCTTCSEEE
T ss_pred EEEccCCCCC----CCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCC---cccccCCCCCCCcEEE
Confidence 7777765553 4555555432 233444444432211 11222222211000000 000000 01223555
Q ss_pred Eee--cCCCCCEeEEEEEEeCCCceEE-EEEEEEe--CCCCCCCceEEEEE------eccceEEEEecCCCCCCcccEEE
Q psy12061 146 ITN--ASFADAGEYECVVKSTVGKIST-KTTVIVE--GPPGLPGGVQVVEV------HKTSATIQWTDGATNGRPITHYK 214 (626)
Q Consensus 146 i~~--~~~~d~g~Y~C~a~n~~g~~~~-~~~l~v~--~~P~~p~~~~~~~~------~~~~~~l~W~~~~~~~~~~~~y~ 214 (626)
|.. +.....+.++|.|.|..|.... ...+... .+|.+|.++.+... ..+++.|+|++|..++.....|.
T Consensus 164 ~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~ 243 (313)
T 2d9q_B 164 IPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCE 243 (313)
T ss_dssp EEGGGCCSSSCEEEEEEEEETTEEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEE
T ss_pred ECccccccceeEEEEEEEECCCCCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEE
Confidence 654 7777888899999999998532 2223222 36889988887654 46899999999865555567999
Q ss_pred EEEe-ecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCC--cccCCCCCC
Q psy12061 215 IIAR-TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSP--QYNTPADKP 287 (626)
Q Consensus 215 v~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~--~~~~~~~~p 287 (626)
|+|+ ..+...|..+.... .....+.+.+ |.+++.|.|+|+|.|..|.+.+|..+. .+.+...+|
T Consensus 244 v~y~~~~~~~~w~~~~~~~--------~~~~~~~l~~-L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P 310 (313)
T 2d9q_B 244 LRHKPQRGEASWALVGPLP--------LEALQYELCG-LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAA 310 (313)
T ss_dssp EEEEESSSCCCCEEEEEEC--------SCEEEEEECS-CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC---
T ss_pred EEEccCCCCCCcEEccccc--------CcceEEEEeC-CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCC
Confidence 9999 66777897653211 1223455555 999999999999999988776555442 344444433
No 122
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=4.8e-23 Score=203.70 Aligned_cols=246 Identities=21% Similarity=0.221 Sum_probs=169.2
Q ss_pred CCCCceEEEEeee-CCCCCCeeEEEeCC---EEccC----CCcEEEccCCcEEEccCCCCCCE---EEEEEEEcCCCCce
Q psy12061 2 AGEGGNVTIFCNP-EAAPKPKFVWKKDG---NIIGS----GGRRKIFENGNLLISPVSRDDSG---IYSCTATNVHGMDE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~-~g~p~p~i~W~~~~---~~i~~----~~~~~~~~~g~L~i~~v~~~d~G---~Y~C~a~n~~g~~~ 70 (626)
+.+|++++|.|.+ .|.|.|.|.|+|++ .+... +.++.+..+|+|.|.+++.+|+| .|+|.|.|..|...
T Consensus 112 ~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~ 191 (395)
T 1bih_A 112 PIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEE 191 (395)
T ss_dssp CBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSC
T ss_pred eeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceE
Confidence 5789999999996 78899999999986 22221 56788888899999999999999 99999999998855
Q ss_pred eeEEEEEEe---CC-------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe-
Q psy12061 71 SKGRLIVLH---GP-------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI- 139 (626)
Q Consensus 71 ~~~~l~v~~---~p-------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~- 139 (626)
......+.. .+ ......+....+.+|++++|.|.+.+.|.|. +.|+|+|..+..... .++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~--i~W~~~g~~~~~~~~-----~~~~~~ 264 (395)
T 1bih_A 192 VVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGY--PNYFKNGKDVNGNPE-----DRITRH 264 (395)
T ss_dssp EEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCC--CEEEETTEECCCCTT-----SSEESC
T ss_pred EEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCe--EEEEECCEEcCCCCc-----eeEEEE
Confidence 443222211 10 0011135678899999999999999998875 589999998865421 22221
Q ss_pred ---cCCeEEEeecCCCCCEeEEEEEEeCCCceEE-EEEEEEeCCCCC---CCceEEEEEeccceEEEEecCCCCCCcccE
Q psy12061 140 ---DGGLLEITNASFADAGEYECVVKSTVGKIST-KTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITH 212 (626)
Q Consensus 140 ---~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~-~~~l~v~~~P~~---p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~ 212 (626)
.+..|.|.+++.+|+|.|+|.|.|..|.... .+.|.|..+|.. |.. .........+.|.|..
T Consensus 265 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~-~~~~~~g~~~~l~C~~---------- 333 (395)
T 1bih_A 265 NRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEK-VIVVKQGQDVTIPCKV---------- 333 (395)
T ss_dssp SSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCS-EEEECTTSCEEEECEE----------
T ss_pred ecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCc-ceEecCCCeEEEEEEE----------
Confidence 2347999999999999999999999998655 889998876642 222 1122233445555542
Q ss_pred EEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 213 YKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 213 y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...+.....|.+.+..+....... .. ..+.+.+ +...+.+.|+|.|.|..|..
T Consensus 334 ---~g~p~p~v~W~~~g~~~~~~~~~~-~~-~~L~i~~-~~~~d~G~Y~C~a~N~~G~~ 386 (395)
T 1bih_A 334 ---TGLPAPNVVWSHNAKPLSGGRATV-TD-SGLVIKG-VKNGDKGYYGCRATNEHGDK 386 (395)
T ss_dssp ---EEESCCCCEEEETTEECCSSSEEE-ET-TEEEESS-CCSTTCEEEEEEEEETTEEE
T ss_pred ---CcccCCeeEEEECCEECCCCceEE-EC-CEEEEee-CCcccCEEEEEEEEccCCCc
Confidence 222222344544433221110000 11 1556655 99999999999999999864
No 123
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.90 E-value=6.1e-23 Score=193.34 Aligned_cols=236 Identities=15% Similarity=0.159 Sum_probs=158.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.| .|.|+|++..+ ......+++|.|.+++.+|+|.|+|.|.| |. ...+.|.|..+|
T Consensus 24 v~~G~~v~l~C~~~~----~i~W~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~~~~ 92 (290)
T 2o26_X 24 VEAGDTLSLTCIDPD----FVRWTFKTYFN----EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVRDPA 92 (290)
T ss_dssp EETTSCEEEEEECTT----EEEEEEECSSS----CEEEECSSEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEECSS
T ss_pred EcCCCcEEEEECCCC----cEEEecCCcce----eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEeCCC
Confidence 568999999999998 99999999877 22333447899999999999999999999 54 677899998877
Q ss_pred ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEE-eeCCEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCE-eEE
Q psy12061 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW-THNGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAG-EYE 158 (626)
Q Consensus 82 ~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W-~~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g-~Y~ 158 (626)
... ..+....+.+|++++|.|.+.+ |. ...+.| ++||..+... .++. ...+.|.|.+++.+|+| .|+
T Consensus 93 ~~~-~~~~~~~~~~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l~~~-------~~~~~~~~~~L~i~~v~~~d~G~~Y~ 162 (290)
T 2o26_X 93 KLF-LVGLPLFGKEDSDALVRCPLTD-PQ-VSQYSLIECDGKSLPTD-------LTFVPNPKAGITIKNVKRAYHRLCVR 162 (290)
T ss_dssp CCB-CCCCCEEEETTSCEEECCCBSC-CS-CEEEEEEETTSCCCCTT-------CEEEEETTTEEEEESCCGGGTTCEEE
T ss_pred ccc-ccccceEEecCCeEEEeCcCCC-CC-CceEEEEeCCCcCCCCC-------CceeeCCCCCEEEecccHHHCCCEEE
Confidence 766 4567788999999999999995 54 146799 5788877543 3333 34578999999999999 999
Q ss_pred EEEEeCCCce-EEEEEEEEeCCCCCCCceEE-----EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecce
Q psy12061 159 CVVKSTVGKI-STKTTVIVEGPPGLPGGVQV-----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232 (626)
Q Consensus 159 C~a~n~~g~~-~~~~~l~v~~~P~~p~~~~~-----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~ 232 (626)
|.|.|..|.. +..+.|.|...+..|..+.. .......+.|.|..... ..+. . ..|.+.+...
T Consensus 163 C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~-p~p~---~--------i~W~~~~~~~ 230 (290)
T 2o26_X 163 CAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDV-STSV---N--------SMWLKMNPQP 230 (290)
T ss_dssp EEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEES-STTC---E--------EEEEEESSSE
T ss_pred EEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecC-Ccce---e--------EEEecCCCCC
Confidence 9999986653 34577877732221111111 11223445555553211 1111 1 1232222210
Q ss_pred ----eeee----ee--ccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 233 ----IGKE----VD--RYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 233 ----~~~~----~~--~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.... .. .......+.|.+ +...+.+.|+|.|.|..|..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~d~G~Y~C~a~N~~g~~ 278 (290)
T 2o26_X 231 QHIAQVKHNSWHRGDFNYERQETLTISS-ARVDDSGVFMCYANNTFGSA 278 (290)
T ss_dssp EECCCEECCEEEEETTEEEEEEEEEESS-CCSSSCEEEEEEEECSSCEE
T ss_pred ccceeecccccccCceeeEEEEEEEEcC-CCcccCeEEEEEEeCCCCcE
Confidence 0000 00 011223455555 88899999999999999865
No 124
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.90 E-value=1.3e-23 Score=182.94 Aligned_cols=158 Identities=18% Similarity=0.322 Sum_probs=126.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEE--cc------------CCCcEEEc----cCC--cEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNI--IG------------SGGRRKIF----ENG--NLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~--i~------------~~~~~~~~----~~g--~L~i~~v~~~d~G~Y~C~ 61 (626)
+.+|++++|.|.+.+.|.+.|.|+|++.. +. ...|..+. .+| +|.|.+++.+|+|.|+|.
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 86 (184)
T 2ny1_B 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE 86 (184)
T ss_dssp EETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEE
Confidence 67999999999999999999999998863 21 12344443 233 499999999999999999
Q ss_pred EEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC
Q psy12061 62 ATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141 (626)
Q Consensus 62 a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 141 (626)
|.|..+ .+.|.|.. +.. +....+.+|++++|.|.+.+.|.| .+.|++++..+. ...
T Consensus 87 ~~~~~~----~~~l~V~~----~~~-~~~~~v~~g~~~~l~C~~~~~p~~--~v~W~~~~~~~~-------------~~~ 142 (184)
T 2ny1_B 87 VEDQKE----EVQLLVFG----LTA-NSDTHLLQGQSLTLTLESPPGSSP--SVQCRSPRGKNI-------------QGG 142 (184)
T ss_dssp ETTEEE----EEEEEEEE----EEE-SSCSEEETTCCEEEEEECCTTCCC--EEEEECTTSCEE-------------EES
T ss_pred EEcCCC----cEEEEEEE----ecC-CCCceeecCCCEEEEEEcCCCCCC--EEEEEeCCCccc-------------cCc
Confidence 998744 56677753 222 445678999999999999998765 569999876542 256
Q ss_pred CeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 142 GLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 142 ~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
+.|.|.+++.+|+|.|+|.|.|..+..+..+.|.|.+.|.+|
T Consensus 143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~ 184 (184)
T 2ny1_B 143 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 184 (184)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC--
T ss_pred eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCCCC
Confidence 799999999999999999999999999999999999988653
No 125
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.90 E-value=2.4e-23 Score=204.69 Aligned_cols=163 Identities=25% Similarity=0.466 Sum_probs=142.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+... ....++.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 219 ~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 295 (382)
T 1cs6_A 219 ALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK---WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQP 295 (382)
T ss_dssp EETTCCEEEECEEEEESCCEEEEEECCSCCSCC---CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEccCCCCEEEEEECCcccccE---EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC
Confidence 468999999999999999999999988776431 12235679999999999999999999999998888999998888
Q ss_pred ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEE
Q psy12061 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVV 161 (626)
Q Consensus 82 ~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a 161 (626)
.+.. .+....+..|++++|.|.+.+.|.|. +.|+|+|..+... .++...++.|.|.+++.+|+|.|+|.|
T Consensus 296 ~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~-------~~~~~~~~~L~i~~v~~~d~G~Y~C~a 365 (382)
T 1cs6_A 296 DWLD-VITDTEADIGSDLRWSCVASGKPRPA--VRWLRDGQPLASQ-------NRIEVSGGELRFSKLVLEDSGMYQCVA 365 (382)
T ss_dssp EEEE-CCCCEEEETTCCEEEECEEEEESCCE--EEEEETTEECCCC-------SSEEEETTEEEESSCCGGGCEEEEEEE
T ss_pred Cccc-CCCccEEcCCCeEEEEEEeeeecCCE--EEEEECCEECCCC-------ceEEEECCEEEECcCCcccCEEEEEEE
Confidence 7765 46678899999999999999998874 6899999998754 456667889999999999999999999
Q ss_pred EeCCCceEEEEEEEEe
Q psy12061 162 KSTVGKISTKTTVIVE 177 (626)
Q Consensus 162 ~n~~g~~~~~~~l~v~ 177 (626)
.|..|..+..+.|.|.
T Consensus 366 ~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 366 ENKHGTVYASAELTVQ 381 (382)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEEEe
Confidence 9999999999999885
No 126
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=2.5e-23 Score=186.20 Aligned_cols=173 Identities=20% Similarity=0.312 Sum_probs=134.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEc------------cCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCC--
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII------------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG-- 67 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i------------~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g-- 67 (626)
+.+|++++|.|.+.|.|.+.|.|+|++..+ ....|+.+. +++|.|.+++.+|+|.|+|.|.|..|
T Consensus 13 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~Y~C~~~~~~g~~ 91 (212)
T 1f97_A 13 VPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGEYTCMVSEEGGQN 91 (212)
T ss_dssp EETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEEEEEEEEETTSSS
T ss_pred EEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeEEEEEEEccCCCc
Confidence 578999999999999999999999987653 234566554 48899999999999999999999877
Q ss_pred CceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEE-ecccCCcceeEEEeeCCE-EeccccCC--ccCCCeeE--ecC
Q psy12061 68 MDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCS-AHTEELLDVAYIWTHNGV-RIGNMDLN--ELETPNIN--IDG 141 (626)
Q Consensus 68 ~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~-~~~~p~p~~~i~W~~~~~-~~~~~~~~--~~~~~~~~--~~~ 141 (626)
.....+.|.|..+|.+... +....+..|++++|.|. +.+.|.| .+.|++++. .+...... .....+.. ...
T Consensus 92 ~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 168 (212)
T 1f97_A 92 YGEVSIHLTVLVPPSKPTI-SVPSSVTIGNRAVLTCSEHDGSPPS--EYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS 168 (212)
T ss_dssp EEEEEEEEEEEBCCCCCEE-ECCSEEETTSCEEEEEECSCCBSCC--EEEEEETTEESBC-----CBSCSSSCEEECTTT
T ss_pred ccEEEEEEEEEcCCCCccc-CCccccCCCCeEEEEEEcccCcCCC--EEEEEeCCcccccccccccccccCceeEecCCC
Confidence 3456678888888876554 34467899999999999 7888876 569999999 77653210 00111222 356
Q ss_pred CeEEEeecCCCCCEeEEEEEEeCCCce--EEEEEEEEeC
Q psy12061 142 GLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEG 178 (626)
Q Consensus 142 ~~l~i~~~~~~d~g~Y~C~a~n~~g~~--~~~~~l~v~~ 178 (626)
+.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 169 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 169 GDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp CCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 789999999999999999999999987 5566777664
No 127
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.90 E-value=4.3e-23 Score=197.36 Aligned_cols=169 Identities=24% Similarity=0.297 Sum_probs=141.6
Q ss_pred CCCCceEEEEeeeCC----------CCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPEA----------APKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g----------~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|+.+.|.|.+.| .|.|.+.|+|+|..+..+.++.+...+ .|.|.+++.+|+|.|+|.|.|..|.
T Consensus 110 ~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 189 (317)
T 2y25_A 110 ALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG 189 (317)
T ss_dssp HTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred cccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCce
Confidence 357888888888887 789999999999999888888776655 3999999999999999999999998
Q ss_pred ceeeEEEEEEe--------------------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecccc
Q psy12061 69 DESKGRLIVLH--------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128 (626)
Q Consensus 69 ~~~~~~l~v~~--------------------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 128 (626)
......|.|.. .|.+...+|....+..|++++|.|.+.+.|.|. +.|+++|..+...
T Consensus 190 ~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~--i~W~~~g~~~~~~- 266 (317)
T 2y25_A 190 HQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE--VSWLKNEKALASD- 266 (317)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCE--EEEEESSSEECCC-
T ss_pred EEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCE--EEEEECCEeCCCC-
Confidence 87777776531 355555567788999999999999999998874 6999999998754
Q ss_pred CCccCCCeeEecC--C---eEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCC
Q psy12061 129 LNELETPNINIDG--G---LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 129 ~~~~~~~~~~~~~--~---~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
.++.+.. + .|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..|
T Consensus 267 ------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 267 ------DHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp ------SSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ------CcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 2333322 2 8999999999999999999999999999999998754
No 128
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.90 E-value=4.9e-23 Score=194.25 Aligned_cols=172 Identities=22% Similarity=0.345 Sum_probs=139.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc--CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCc--eeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~--~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+. .+.++....++.|.|.+++.+|+|.|+|.|.|..+.. .....|.|
T Consensus 112 ~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v 191 (291)
T 1qz1_A 112 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 191 (291)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEE
T ss_pred ccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEE
Confidence 4689999999999999999999999999875 3467777888899999999999999999999976443 34567777
Q ss_pred EeCCceeeeC-CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cCCeEEEeecCCCCC
Q psy12061 78 LHGPSYYEQL-PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DGGLLEITNASFADA 154 (626)
Q Consensus 78 ~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~ 154 (626)
..+|.+...+ +....+..|++++|.|.+.+.|.| .+.|+++|..+..... ...++.. ....|.|.+++.+|+
T Consensus 192 ~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p--~i~W~~~g~~~~~~~~---~~~~~~~~~~~~~L~i~~v~~~d~ 266 (291)
T 1qz1_A 192 NVPPTVQARQSIVNATANLGQSVTLVCDADGFPEP--TMSWTKDGEPIENEEE---DDEKHIFSDDSSELTIRNVDKNDE 266 (291)
T ss_dssp EEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCC--EEEEEETTEECCCC-----CCSSEEECTTSCEEEECSCCGGGC
T ss_pred ecCCcccccccccccccccCceEEEEEEEEEeCCC--cEEEEECCEECcCCCC---CCcceEEcCCCcEEEEEecChhcC
Confidence 7777665432 235678899999999999999887 4699999999875421 0012222 356899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
|.|+|.|.|..|..+..+.|.|..
T Consensus 267 G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 267 AEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCceEEEEEEEEEc
Confidence 999999999999999999998864
No 129
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.90 E-value=4.3e-23 Score=183.90 Aligned_cols=172 Identities=20% Similarity=0.329 Sum_probs=130.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc-------------------CCCcEEEccCCcEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-------------------SGGRRKIFENGNLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~-------------------~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a 62 (626)
|.+|++++|.|.+.+.|.+.|.|+|++.... ..+|..+..+++|.|.+++.+|+|.|+|.+
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~ 90 (208)
T 3r4d_A 11 VAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDM 90 (208)
T ss_dssp EETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEEE
T ss_pred eecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEEE
Confidence 5789999999999888999999999754221 245777888889999999999999999999
Q ss_pred EcCC-CCceeeEEEEEEeCCc--eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe
Q psy12061 63 TNVH-GMDESKGRLIVLHGPS--YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI 139 (626)
Q Consensus 63 ~n~~-g~~~~~~~l~v~~~p~--~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 139 (626)
.|.. +.......|.|..++. .+...+.. +..|++++|.|.+.+.| | .+.|+++|..+.... ......
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p--~i~W~~~g~~l~~~~-----~~~~~~ 160 (208)
T 3r4d_A 91 TDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-A--NIQWLFNSQSLQLTE-----RMTLSQ 160 (208)
T ss_dssp ECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-C--EEEEEETTEECCCCS-----SEEEET
T ss_pred EcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-C--ceEEEECCEeCCCCC-----CeEEcC
Confidence 9985 4455667888876532 22222333 88999999999999976 4 679999999987542 112223
Q ss_pred cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCC
Q psy12061 140 DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLP 183 (626)
Q Consensus 140 ~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p 183 (626)
.++.|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|..+
T Consensus 161 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~~ 205 (208)
T 3r4d_A 161 NNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHHH 205 (208)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC------
T ss_pred CCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCccc
Confidence 45899999999999999999999999976 556788777766543
No 130
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.90 E-value=6.2e-23 Score=195.91 Aligned_cols=173 Identities=19% Similarity=0.210 Sum_probs=135.4
Q ss_pred CCCCceEEEEeee------CCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEE-cCCCCce---e
Q psy12061 2 AGEGGNVTIFCNP------EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT-NVHGMDE---S 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~------~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~-n~~g~~~---~ 71 (626)
+.+|++++|.|.+ .|.|.|.|.|+|+|.++..+.......++.|.|.+++.+|+|.|+|.|. |..|... .
T Consensus 115 ~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~ 194 (315)
T 1itb_B 115 LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITR 194 (315)
T ss_dssp EETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred EecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEE
Confidence 4579999999999 8999999999999999976544455567799999999999999999999 7888763 3
Q ss_pred eEEEEEE-----eCCceeeeCCC-ceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-------
Q psy12061 72 KGRLIVL-----HGPSYYEQLPP-KITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN------- 138 (626)
Q Consensus 72 ~~~l~v~-----~~p~~~~~~~~-~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~------- 138 (626)
...+.+. .+|.+.. ++. ...+..|++++|.|.+.+.|.| .+.|++||..+........ ..+..
T Consensus 195 ~~~~~~~~~~~~~~P~~~~-~~~~~~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~i~~~~~~~~-~~~~~~~~~~~~ 270 (315)
T 1itb_B 195 VIEFITLEENKPTRPVIVS-PANETMEVDLGSQIQLICNVTGQLSD--IAYWKWNGSVIDEDDPVLG-EDYYSVENPANK 270 (315)
T ss_dssp EEEEEEECCCCCCCCEECS-CCSEEEECCSSSCEEEEEEEEECTTS--EEEEEETTEECCTTCSSEE-EEEEEECCSSCG
T ss_pred EEEEEEecCCCCCCCEEec-CCCCcEEEeCCCcEEEEEEEecCCCC--eeEEEECCEECCccccccc-ccceeeeccCCC
Confidence 3445454 3455543 344 3688999999999999999887 4599999999876421000 01111
Q ss_pred ---ecCCeEEEeecCCCC-CEeEEEEEEeCCCceEEEEEEEEeC
Q psy12061 139 ---IDGGLLEITNASFAD-AGEYECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 139 ---~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
...+.|.|.+++.+| +|.|+|.|.|..|..+..+.|.|..
T Consensus 271 ~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 271 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp GGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred ceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 123489999999999 9999999999999999999988753
No 131
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.90 E-value=4.1e-23 Score=182.94 Aligned_cols=167 Identities=16% Similarity=0.180 Sum_probs=127.0
Q ss_pred CCCCceEEEEeeeCCCCC-----CeeEEEe-CCEEccCCCcEEEccC------CcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAAPK-----PKFVWKK-DGNIIGSGGRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~-----p~i~W~~-~~~~i~~~~~~~~~~~------g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
|.+|++++|.|.+.+.|. +.|.|+| ++..+...+|..+..+ ++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 14 v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 93 (202)
T 3bp6_B 14 VDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWD 93 (202)
T ss_dssp EETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcc
Confidence 568999999999999986 8999999 6655556677777654 479999999999999999999998888
Q ss_pred eeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC---CeEEE
Q psy12061 70 ESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG---GLLEI 146 (626)
Q Consensus 70 ~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i 146 (626)
...+.|.|..+|..... ....+..|++++|.|.+.|.|.| .+.|++++..+... ...... ..+.|
T Consensus 94 ~~~~~l~V~~~~~~p~~--~~~~~~~g~~v~l~C~~~g~P~p--~v~W~~~~~~~~~~--------~~~~~~~~~~~~~i 161 (202)
T 3bp6_B 94 YKYLTVKVKASYMRIDT--RILEVPGTGEVQLTCQARGYPLA--EVSWQNVSVPANTS--------HIRTPEGLYQVTSV 161 (202)
T ss_dssp EEEEEEEEEBCCCCEEE--EEEECTTTCCEEEEEEEEEBSCC--EEEETTCCSCCEEE--------EEECTTSCEEEEEE
T ss_pred eEEEEEEecCCCCcccE--EEEecCCCCeEEEEEEccccCCc--eEEEEeCCCCccCc--------eeeCCCCCEEEEEE
Confidence 78888988765422111 11245789999999999998876 55899988765421 111112 35667
Q ss_pred eecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 147 TNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 147 ~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
.++...|.|.|+|.|.|..|..+..+.|.|..+.
T Consensus 162 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 162 LRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSRM 195 (202)
T ss_dssp EEECCCTTCCEEEEEEETTTTEEEEEEECC----
T ss_pred EEEEcCCCCEEEEEEEcCCcccccEEEEEecCcC
Confidence 7999999999999999999999999988876543
No 132
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.90 E-value=4.9e-22 Score=203.90 Aligned_cols=175 Identities=17% Similarity=0.248 Sum_probs=126.0
Q ss_pred CCCCceEEEEeeeCCCCCC--eeEEEeCCEEccCCCcEEE---ccCC------cEEEccCCCCCCEEEEEEEEcCCCCce
Q psy12061 2 AGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKI---FENG------NLLISPVSRDDSGIYSCTATNVHGMDE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~i~~~~~~~~---~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 70 (626)
+.+|++++|.|.+.|.|+| +|.|+|||.+|..+.+... ..+| .|.|.+++.+|+|.|+|.|.|..|...
T Consensus 126 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 205 (523)
T 2rcj_C 126 ELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 205 (523)
T ss_pred ccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccc
Confidence 3579999999999998764 9999999998865433221 1222 599999999999999999999988766
Q ss_pred eeEEEEE----EeCCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccCCcc--CCCeeEecCCe
Q psy12061 71 SKGRLIV----LHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNEL--ETPNINIDGGL 143 (626)
Q Consensus 71 ~~~~l~v----~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~--~~~~~~~~~~~ 143 (626)
....+.+ ..+|.+... +....+.+|++++|.|.+.+. |.| ++|.|+|+|..+........ ..+.+ ...+.
T Consensus 206 ~~~~~~~~~~~~~~P~v~~~-~~~~~~~~G~~~~l~C~~~g~~P~p-~~v~W~k~g~~~~~~~~~~~~~~~g~~-~~~s~ 282 (523)
T 2rcj_C 206 KTVAPTECSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPQP-VTVSWNSGALTSGVHTFPAVLQSSGLY-SLSSV 282 (523)
T ss_pred cceeeeecCCCCcCCEEEec-CCCcccccCCceEEEEEEeceeCCC-eEEEEecCCcccceEeCCcEecCCCcE-EEEEE
Confidence 6555432 234554433 334456899999999999987 654 47799999987643211000 00111 11348
Q ss_pred EEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 144 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 144 l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
|.|.+++..| |.|+|.|.|..|.......|.+...|
T Consensus 283 L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P 318 (523)
T 2rcj_C 283 VTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLP 318 (523)
T ss_pred EEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCc
Confidence 9999999999 99999999999988777777655443
No 133
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.89 E-value=3.2e-22 Score=189.16 Aligned_cols=228 Identities=15% Similarity=0.135 Sum_probs=158.8
Q ss_pred EEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEE
Q psy12061 349 AVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGH 428 (626)
Q Consensus 349 ~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y 428 (626)
..+.+.++... .-.|.|.|.+. |..... ..........|+.+|.++++...+.+++.|+|+++...+ .+.+|
T Consensus 65 ~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~-~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~-----~~~~Y 136 (303)
T 1i1r_A 65 SSVTFTDIASL-NIQLTCNILTF-GQLEQN-VYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETH-----LETNF 136 (303)
T ss_dssp EEEEECSCCCS-EEEEEEEEEET-TTEEEE-EEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCS-----SCCEE
T ss_pred EEEEEcCcCCC-ceEEEEecccC-CCcceE-EEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCC-----CCcCE
Confidence 45778887654 34567777663 322111 111111223445589999998888899999999887542 25699
Q ss_pred EEEEEecCCCccceEEEEecCccceEEEeCC-ccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeee--
Q psy12061 429 RIKYWKEDNPEETAVYYLSRTTRNWALIVGL-QPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI-- 505 (626)
Q Consensus 429 ~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~-- 505 (626)
.|+|+........ ..........+.+.+| .|++.|.|+|.|.|..|.+.. ....+.+....++.||.++.+...
T Consensus 137 ~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s-~~~~~~~~~~~~p~pP~~~~v~~~~~ 213 (303)
T 1i1r_A 137 TLKSEWATHKFAD--CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEE 213 (303)
T ss_dssp EEEEEETTEECCC--EECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEEC-CCEEECGGGGEECCCCEEEEEECCSS
T ss_pred EEEEEecCCCCcc--CCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCccc-CCEEECHHHeEecCCCcceEEEEecC
Confidence 9998765422111 1123344567999999 999999999999999998753 345555555566779999988755
Q ss_pred CCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeee---cCccceEEecCCCCCceEEEEEEEEecCCCCCC
Q psy12061 506 NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIP---VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRM 582 (626)
Q Consensus 506 ~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~ 582 (626)
+.+++.|+|+ +|...++.+.+|.|+|+..+... +..+.. ....+.+.|.+|.|++.|.|+|+|+|..|.|++
T Consensus 214 ~~~sv~l~W~--~p~~~~~~i~~Y~v~y~~~~~~~---w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~ 288 (303)
T 1i1r_A 214 LSSILKLTWT--NPSIKSVIILKYNIQYRTKDAST---WSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYW 288 (303)
T ss_dssp SSSCEEEEEE--CCGGGGTSCEEEEEEEEETTCSS---CEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCC
T ss_pred CCCEEEEEEC--CCCCCCcccEEEEEEEEeCCCCC---ceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCc
Confidence 6789999999 55556788999999998765331 111111 345678999999999999999999999999888
Q ss_pred CCCc--EEEeec
Q psy12061 583 SSPA--ITFQMG 592 (626)
Q Consensus 583 s~~~--~~~~~~ 592 (626)
|+++ +.++|.
T Consensus 289 S~wS~~~~~~T~ 300 (303)
T 1i1r_A 289 SDWSEEASGITY 300 (303)
T ss_dssp CCCCCCEEEECC
T ss_pred CCCCCccceeCC
Confidence 7543 345554
No 134
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.89 E-value=1.2e-22 Score=191.32 Aligned_cols=243 Identities=14% Similarity=0.126 Sum_probs=160.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEE-ccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~-~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.| .|.|++++.... +... ..+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 16 v~~G~~v~L~C~~~~----~v~W~~~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 88 (289)
T 3ejj_X 16 VEPGETVTLRCVSNG----SVEWDGPISPYW---TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDP 88 (289)
T ss_dssp ECTTCCEEEEEECSS----CCEEECSCSSSS---EECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCS
T ss_pred ECCCCCEEEEEEeCC----cEEEccCCCceE---EEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCC
Confidence 568999999999988 499998774321 1111 12357999999999999999999999998888899999887
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee-CCEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCEeEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH-NGVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~Y~ 158 (626)
|..+...+....+.+|++++|.|.+.+.+.+. .+.|++ ++..+... .++. ..++.|.|.+++.+|+|.|+
T Consensus 89 ~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~-~v~W~~~~~~~~~~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~ 160 (289)
T 3ejj_X 89 AHSWNLLAQEVTVVEGQEAVLPCLITDPALKD-SVSLMREGGRQVLRK-------TVYFFSPWRGFIIRKAKVLDSNTYV 160 (289)
T ss_dssp SCSEEESCSEEEEETTSCEEECEEESCGGGGG-SEEEEEGGGEECCTT-------CCEEEETTTEEEESSCCGGGCEEEE
T ss_pred CcceecccceEEEecCCceEeEEEccCCCcce-EEEEEecCCeecCCC-------ccEEECCCCCEEEeecccccCEEEE
Confidence 77666667889999999999999999877653 468975 67666543 2333 35678999999999999999
Q ss_pred EEEE-eCCCceEEEEEEEEeCCCCCCCceEEE-----EEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecce
Q psy12061 159 CVVK-STVGKISTKTTVIVEGPPGLPGGVQVV-----EVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV 232 (626)
Q Consensus 159 C~a~-n~~g~~~~~~~l~v~~~P~~p~~~~~~-----~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~ 232 (626)
|.+. +..+..+..+.|.|...+..|..+... ......+.|.|..... .+.. .+ .|.+.+..+
T Consensus 161 C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~--~p~~--~i--------~W~~~~~~~ 228 (289)
T 3ejj_X 161 CKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNA--EVGF--NV--------ILKRGDTKL 228 (289)
T ss_dssp EEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEES--SSCC--EE--------EEEETTEEC
T ss_pred EEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCC--CCce--EE--------EEEECCEEe
Confidence 9999 555666778888887543222122211 1234455555553210 1111 12 232222211
Q ss_pred eeeee-----eccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 233 IGKEV-----DRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 233 ~~~~~-----~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
..... ........+.+.+ +...+.+.|+|.|.|..|...
T Consensus 229 ~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 272 (289)
T 3ejj_X 229 EIPLNSDFQDNYYKKVRALSLNA-VDFQDAGIYSCVASNDVGTRT 272 (289)
T ss_dssp CCCEEEEECSSSEEEEEEEEESS-CCSSSCEEEEEEEECSSCEEE
T ss_pred eccCCcccccceEEeeEEEEEEe-ecccCCEEEEEEEEcCCCCcc
Confidence 11000 0001122455544 899999999999999998654
No 135
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.89 E-value=4.4e-22 Score=177.91 Aligned_cols=197 Identities=14% Similarity=0.126 Sum_probs=147.4
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC-CCcceeeeeeee--------cceeeEEEEeCCCcce
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEY--------GNVGIAVVRIPSEFYY 359 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~L~p~ 359 (626)
.+|.++.+...+.+++.|+|++ +...++++.+|.|+|+..+ ...|........ .......+.+.+|.|+
T Consensus 3 ~pP~~~~~~~~~~~sv~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 3 YPPTPPNVTRLSDESVMLRWMV--PRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCEEEEEETTEEEEEEEE--ECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCEeeEecCCEEEEEEEC--CCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 3555666666788999999998 4445678999999999876 367765442211 1134567889999999
Q ss_pred eEEEEEEEEecCCCCCCCCc-cEEEEccCC---CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEec
Q psy12061 360 TEYEVKVQAINDVGPGPESE-VVTIFSAED---MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE 435 (626)
Q Consensus 360 ~~Y~~~v~a~n~~g~~~~s~-~~~~~t~~~---~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~ 435 (626)
+.|.|+|+|.|..|.+..+. ...+.+... .|+.+|.++.+...+.+++.|+|+++.. ..++.+.+|.|+|+..
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~---~~~~~i~~Y~v~~~~~ 157 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASD---ADEHLITGYYAYYRPS 157 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTT---CCGGGCCEEEEEEEET
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCc---cCCCCcceEEEEEEEC
Confidence 99999999999999877665 233333322 2444688888888899999999999862 1236799999999877
Q ss_pred CCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecC
Q psy12061 436 DNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490 (626)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~ 490 (626)
+.................+++.+|+|++.|.|+|+|.|..|.|++|..+.++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 158 SSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp TCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 7632222223333445679999999999999999999999999999999998864
No 136
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=3.2e-23 Score=199.73 Aligned_cols=180 Identities=22% Similarity=0.398 Sum_probs=141.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEE---E-ccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK---I-FENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~---~-~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+....++. . ..+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 135 v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 214 (334)
T 1ry7_B 135 VPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDV 214 (334)
T ss_dssp EETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEE
Confidence 3479999999999999999999999999987654431 1 12347999999999999999999999999888889999
Q ss_pred EeC----CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee----CCEEeccccCCcc---CCCee---EecCCe
Q psy12061 78 LHG----PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH----NGVRIGNMDLNEL---ETPNI---NIDGGL 143 (626)
Q Consensus 78 ~~~----p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~----~~~~~~~~~~~~~---~~~~~---~~~~~~ 143 (626)
... |.+....|....+..|++++|.|.+.+.|.| .+.|+| ||..+........ ..... ......
T Consensus 215 ~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p--~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (334)
T 1ry7_B 215 LERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEV 292 (334)
T ss_dssp ECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCE--EEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCC
T ss_pred ecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCC--eEEEEECCcCCCccccCCCCeeEEEeecCccccccccccE
Confidence 863 3344445678899999999999999998876 568999 7777654321000 00000 011248
Q ss_pred EEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 144 LEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 144 l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...|.++
T Consensus 293 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 293 LSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp EEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC-
T ss_pred EEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCCc
Confidence 9999999999999999999999999999999999877543
No 137
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.89 E-value=1.7e-22 Score=180.75 Aligned_cols=192 Identities=17% Similarity=0.147 Sum_probs=143.5
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCC-ccCceEEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGL-QPDTKYYV 467 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~p~t~Y~v 467 (626)
.|+.+|.++++...+.+++.|+|+++...+ ...+|.|+|+........ ..........+.+.+| .+++.|.|
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~-----~~~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~~~~t~Y~~ 78 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETH-----LETNFTLKSEWATHKFAD--CKAKRDTPTSCTVDYSTVYFVNIEV 78 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCS-----SCCEEEEEEEETTEECCC--EECCSSCTTEEECSSCCCTTSCEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCC-----CCceEEEEEEEcCCCccc--cccccCCcceEEEcCCccccccEEE
Confidence 455589999999888899999999987542 246999998765432111 1122344567999999 99999999
Q ss_pred EEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeee--CCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccc
Q psy12061 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~--~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~ 545 (626)
+|.|.|..|.+. +....+.+....++.+|.++.+... +.+++.|+|+ +|...++.+.+|.|+|+..+... ..
T Consensus 79 ~V~A~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~--~p~~~~~~i~~Y~v~y~~~~~~~---~~ 152 (215)
T 1bqu_A 79 WVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWT--NPSIKSVIILKYNIQYRTKDAST---WS 152 (215)
T ss_dssp EEEEEETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEE--CCGGGGTSCEEEEEEEEETTCSS---CE
T ss_pred EEEEEecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEe--CCCCCCcceEEEEEEEccCCCCC---ce
Confidence 999999999876 4456666666556679999988765 6789999999 56666788999999998765331 11
Q ss_pred eee---ecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCc--EEEeecc
Q psy12061 546 TII---PVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA--ITFQMGE 593 (626)
Q Consensus 546 ~~~---~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~--~~~~~~~ 593 (626)
.+. .....+.+.|.+|.|++.|.|+|+|+|..|.|.+|+++ +.+++.+
T Consensus 153 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 153 QIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp ECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 111 14567899999999999999999999999997755433 3455543
No 138
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.89 E-value=8e-23 Score=194.75 Aligned_cols=169 Identities=17% Similarity=0.175 Sum_probs=138.7
Q ss_pred CCCCceEEEEeeeC-CCCCCeeEEEeCCEEccCCCcEEEccCC------cEEEccCCCCCCEEEEEEEEcCCCCcee--e
Q psy12061 2 AGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDES--K 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~i~~~~~~~~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~ 72 (626)
+.+|+.+.|.|.+. |.|.|.+.|++++..+....+.....+| .|.|..+..+|+|.|+|.|.|..+.... .
T Consensus 129 ~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 208 (313)
T 4fqp_A 129 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLT 208 (313)
T ss_dssp CCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEE
T ss_pred eecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceee
Confidence 45788999999875 6799999999999887655444444444 3899999999999999999998776443 4
Q ss_pred EEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCC
Q psy12061 73 GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA 152 (626)
Q Consensus 73 ~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 152 (626)
..|.|..+|.+...++....+..|++++|.|.+.|.|.|. .|.|+|+|..+... ....++.|.|.+++.+
T Consensus 209 ~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~-~v~W~~~~~~l~~~---------~~~~~~~L~i~~v~~~ 278 (313)
T 4fqp_A 209 VNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPT-GYNWSTTMGPLPPF---------AVAQGAQLLIRPVDKP 278 (313)
T ss_dssp EECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCC-EEEEEETTBSCCTT---------EEEETTEEEECCCSSC
T ss_pred eecccccCCccccccccceeecCCCeEEEEEEecCCCCCc-EEEEEECCEECCCc---------eEEeCCEEEECcCChh
Confidence 5677777887766667777888999999999999999873 56999999887532 2345679999999999
Q ss_pred CCEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 153 DAGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 279 d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 279 INTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred hCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 9999999999999999999999998765
No 139
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.89 E-value=2.4e-23 Score=196.07 Aligned_cols=176 Identities=16% Similarity=0.137 Sum_probs=136.3
Q ss_pred CCCCceEEEEeeeCCCCC-CeeEE-EeCCEEccCCCcEEEccCCcEEEccCCCCCCE-EEEEEEEcCCCCcee-eEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPK-PKFVW-KKDGNIIGSGGRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDES-KGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~-p~i~W-~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~-~~~l~v 77 (626)
+.+|++++|.|.+.+ |. |.|.| ++||..+..+.++.+..++.|.|.+++.+|+| .|+|.|.|..+...+ .+.|.|
T Consensus 103 ~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V 181 (290)
T 2o26_X 103 GKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKV 181 (290)
T ss_dssp EETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEE
T ss_pred EecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEE
Confidence 468999999999996 77 89999 57999998878888877889999999999999 999999998555333 578888
Q ss_pred E----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEe----ccccCCccCCCeeEecCCeEEEeec
Q psy12061 78 L----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI----GNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 78 ~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~----~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
. .+|.+ ...+....+.+|++++|.|.+.+.|.|. .+.|+++|..+ .................+.|.|.++
T Consensus 182 ~~~~~~~P~i-~~~~~~~~v~~G~~v~l~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 259 (290)
T 2o26_X 182 REAIKAIPVV-SVPETSHLLKKGDTFTVVCTIKDVSTSV-NSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSA 259 (290)
T ss_dssp ECCCCSCCEE-ECSCSBCCCCTTCCEEEEEEEEESSTTC-EEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSC
T ss_pred EeCCCCCCcc-ccCCCcceEecCCcEEEEEEEecCCcce-eEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCC
Confidence 7 34544 3456667899999999999999998874 46999998874 2211000000001234568999999
Q ss_pred CCCCCEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 150 SFADAGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
+.+|+|.|+|.|.|..|..+..+.|.|..+|
T Consensus 260 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 260 RVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 9999999999999999999999999988765
No 140
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=2.9e-23 Score=182.65 Aligned_cols=169 Identities=14% Similarity=0.248 Sum_probs=122.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEE--ccCCcEEEccCCCCCCEEEEEEEEcCCCC--ceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--FENGNLLISPVSRDDSGIYSCTATNVHGM--DESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~--~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~v 77 (626)
|.+|++++|.|.+.+ |.+.+.|+|+|..+....+... ..+++|.|.+++.+|+|.|+|.|.|..|. ......|.|
T Consensus 16 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V 94 (196)
T 3p2t_A 16 ISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVM 94 (196)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEE
T ss_pred CCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEe
Confidence 468999999999998 7789999999988754322111 22357999999999999999999999883 345577888
Q ss_pred EeC--CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 78 LHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 78 ~~~--p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
... ++.+...+. ..+.+|++++|.|.+.+.+ ..+.|+|+|..+....... ........+.|.|.+++.+|+|
T Consensus 95 ~~~~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~---~~~~w~k~g~~~~~~~~~~--~~~~~~~~~~L~i~~v~~~d~G 168 (196)
T 3p2t_A 95 TGAYSKPTLSALPS-PLVTSGKSVTLLCQSRSPM---DTFLLCKERAAHPLLCLRS--EHGAQQHQAEFPMSPVTSVHGG 168 (196)
T ss_dssp ECSSCCCEEEEESC-SEECTTCCEEEEEEEEEEE---EEEEEEETTCCCGGGSEEE--EEEEEEEEEEEEECSCCGGGCE
T ss_pred cCCCCCCEEEeCCc-ceecCCCeEEEEEecCCCC---CEEEEEeCCCcccceeecc--cccccCcceEEEeCCCcccCCC
Confidence 642 233333333 3789999999999998854 2679999998775431000 0011234578999999999999
Q ss_pred eEEEEEEeCCC-----ceEEEEEEEEe
Q psy12061 156 EYECVVKSTVG-----KISTKTTVIVE 177 (626)
Q Consensus 156 ~Y~C~a~n~~g-----~~~~~~~l~v~ 177 (626)
.|+|.|.|..+ ..+..+.|.|.
T Consensus 169 ~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 169 TYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp EEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred eEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 99999999876 23445555553
No 141
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=1.8e-22 Score=175.90 Aligned_cols=163 Identities=17% Similarity=0.273 Sum_probs=125.5
Q ss_pred CCCCceEEEEeeeCCCCCC--eeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
|.+|++++|.|.+.|.|.| .+.|+|+|..+....... ....|.|. +.+|+|.|+|.|.| .....+.|.|..
T Consensus 10 v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~--~~~~l~i~--~~~d~G~Y~C~~~n---~~~~~~~l~V~~ 82 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG--QKTEFKVD--SDDQWGEYSCVFLP---EPMGTANIQLHG 82 (184)
T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC--SEEEEEEC--GGGCCEEEEEEEES---TTSCEEEEEECC
T ss_pred EecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC--CcEEEEEe--chhhCeEEEEEEEC---CcCcEEEEEEec
Confidence 5689999999999988777 999999999987543211 12246666 68999999999998 334677888887
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccC-CcceeEEEee---CCEEeccccCCccCCCeeEe----cCCeEEEeecC-
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWTH---NGVRIGNMDLNELETPNINI----DGGLLEITNAS- 150 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~---~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~- 150 (626)
+|.+.. .+....+..|++++|.|.+.+.| .| .+.|++ ++..+.... ...++.+ ....|.|.+++
T Consensus 83 ~P~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~--~i~W~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~L~i~~v~~ 155 (184)
T 3b5h_A 83 PPRVKA-VKSSEHINEGETAMLVCKSESVPPVT--DWAWYKITDSEDKALMNG----SESRFFVSSSQGRSELHIENLNM 155 (184)
T ss_dssp SCCCEE-SCSEEEECTTSCEEEEEECCCSSCCC--EEEEEECCSSSCEECCTT----GGGTEEEEEETTEEEEEECSCCT
T ss_pred CCceee-cCCCcEEcCCCcEEEEEEECCCCCCC--eEEEEEcCCCCCEEeecC----CCCEEEEEecCCeeEEEEeeccc
Confidence 887665 45778899999999999999998 55 569999 554443211 0122222 22489999999
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeC
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 156 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 156 EADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp TTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cccCceEEEEEEeCCCcceEEEEEEEec
Confidence 8999999999999999999999988864
No 142
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.89 E-value=2.6e-22 Score=193.10 Aligned_cols=247 Identities=14% Similarity=0.198 Sum_probs=162.6
Q ss_pred CCCCceEEEEeeeCCC----CCCeeEEEeCC--E-------------Ec--cCCCcEEEc----cCCcEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAA----PKPKFVWKKDG--N-------------II--GSGGRRKIF----ENGNLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~----p~p~i~W~~~~--~-------------~i--~~~~~~~~~----~~g~L~i~~v~~~d~G 56 (626)
+.+|++++|.|.+.+. |.+.|.|+|++ . .+ ...+|+.+. .+++|.|.+++.+|+|
T Consensus 26 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 105 (331)
T 3u83_A 26 GFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEG 105 (331)
T ss_dssp EETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGCE
T ss_pred EEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccCc
Confidence 5789999999999886 44589999954 1 11 234677765 3457999999999999
Q ss_pred EEEEE-EEcCCCCceeeEEEEEEeCCceee-eCCCceEEecC---CcEEEEEE-ecccCCcceeEEEeeCCEEeccccCC
Q psy12061 57 IYSCT-ATNVHGMDESKGRLIVLHGPSYYE-QLPPKITIAAH---RNLQLRCS-AHTEELLDVAYIWTHNGVRIGNMDLN 130 (626)
Q Consensus 57 ~Y~C~-a~n~~g~~~~~~~l~v~~~p~~~~-~~~~~~~v~~g---~~~~l~C~-~~~~p~p~~~i~W~~~~~~~~~~~~~ 130 (626)
.|+|. +.|..|.....+.|.|..+|.+.. ..+....+.+| +.++|.|. +.+.|.| .+.|++++.........
T Consensus 106 ~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~~~~~ 183 (331)
T 3u83_A 106 VYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPS--VVSWETRLKGEAEYQEI 183 (331)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCC--EEEEEESSCCEEEEEEE
T ss_pred EEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCc--eEEEEcCCCCcccccee
Confidence 99998 556677777888999988887643 35677888999 88999997 8888876 56899953222111000
Q ss_pred ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEE------EEeccceEEEEecCC
Q psy12061 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVV------EVHKTSATIQWTDGA 204 (626)
Q Consensus 131 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~------~~~~~~~~l~W~~~~ 204 (626)
......+ ...+.|.|.++...|+|.|+|.|.|..|..+..+.|.|..+|.. .+. ......+.|.|..
T Consensus 184 ~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~----~~~~~~~~~~~~g~~~~l~C~~-- 256 (331)
T 3u83_A 184 RNPNGTV-TVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEV----TIEGFDGNWYLQRMDVKLTCKA-- 256 (331)
T ss_dssp ECTTSCE-EEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEE----EEECCCSCCBTTCCCEEEEEEE--
T ss_pred ECCCCcE-EEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeE----EEecCCCceEeCCCeEEEEEeC--
Confidence 0001111 12346888888999999999999999999888888888765531 111 0112344444442
Q ss_pred CCCCcccEEEEEEeecCC-CCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 205 TNGRPITHYKIIARTNWN-STWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 205 ~~~~~~~~y~v~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...+... ..|.+.+..+.... . .....+.+...+...+.+.|+|.|.|..|..
T Consensus 257 -----------~g~p~p~~i~W~~~~~~~~~~~--~-~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~ 310 (331)
T 3u83_A 257 -----------DANPPATEYHWTTLNGSLPKGV--E-AQNRTLFFKGPINYSLAGTYICEATNPIGTR 310 (331)
T ss_dssp -----------EEESCCCEEEEEETTBSCCTTE--E-EETTEEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred -----------cCCCCCCEEEEEECCCcccccc--e-ecCcEEEEeCCCccccCeEEEEEEEeccccc
Confidence 1111112 23433332221110 0 0122456651388999999999999999865
No 143
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.89 E-value=3.8e-22 Score=190.29 Aligned_cols=243 Identities=15% Similarity=0.195 Sum_probs=151.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCC-----CceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG-----MDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|. .+.+.|+|+|..+... ......+++|.|.+++.+|+|.|+|.|.|..+ .......|.
T Consensus 35 v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~ 112 (316)
T 3vh8_G 35 VPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI-FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIM 112 (316)
T ss_dssp EETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH-HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEE
T ss_pred cCCCCCEEEEEEccCC-CceEEEEeCCCcccee-ecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEE
Confidence 4689999999999988 6899999999876432 11122356899999999999999999987433 234456777
Q ss_pred EEeCC--ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCee--EecCCeEEEeecCCC
Q psy12061 77 VLHGP--SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI--NIDGGLLEITNASFA 152 (626)
Q Consensus 77 v~~~p--~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~ 152 (626)
|...+ +.+...|... +.+|++++|.|.+.+.+ + .+.|+|+|..+..... .... ....+.|.|.+++.+
T Consensus 113 V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~~~-~--~~~w~k~g~~~~~~~~----~~~~~~~~~~~~L~i~~v~~~ 184 (316)
T 3vh8_G 113 VTGNHRKPSLLAHPGPL-VKSGERVILQCWSDIMF-E--HFFLHKEGISKDPSRL----VGQIHDGVSKANFSIGPMMLA 184 (316)
T ss_dssp EECSSCCCEEEEESCSE-EETTCCEEEEEEESSCC-S--EEEEEETTCCSCCEEE----ECEEETTEEEEEEEECSCCGG
T ss_pred EecCCCCCeEEecCCCc-cCCCCeEEEEEcCCCCC-c--EEEEEECCCcccccee----eeeecCCCceEEEEECCCChh
Confidence 76532 2233334343 88999999999996543 2 5689999987743210 0111 124568999999999
Q ss_pred CCEeEEEEEEeCCCc-----eEEEEEEEEeCCCCCCCceEEE----EEeccceEEEEecCCCCCCcccEEEEEEeecCCC
Q psy12061 153 DAGEYECVVKSTVGK-----ISTKTTVIVEGPPGLPGGVQVV----EVHKTSATIQWTDGATNGRPITHYKIIARTNWNS 223 (626)
Q Consensus 153 d~g~Y~C~a~n~~g~-----~~~~~~l~v~~~P~~p~~~~~~----~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~ 223 (626)
|+|.|+|.|.|..|. .+....|.|...+.+| .+... ......+.|.|.... +... +.+..++..
T Consensus 185 D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p-~i~~~~~~~v~~G~~v~L~C~~~~----~~~~--~~W~k~g~~ 257 (316)
T 3vh8_G 185 LAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKP-SLSAQPGPKVQAGESVTLSCSSRS----SYDM--YHLSREGGA 257 (316)
T ss_dssp GCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCC-EEEEESCSCCCTTSCCEEEEEESS----CCSE--EEEEETTSS
T ss_pred hCceEEEEEecCCCCccccCCCCCEEEEecCCCCCC-eEEeCCCCeecCCCcEEEEEECCC----CCcE--EEEEECCCc
Confidence 999999999998874 2566778887755554 22221 123566778887531 1112 222222221
Q ss_pred CceEeecceeeeeeeccCC--ceeEEEEeeccCCceEEEEEEEecCCcc
Q psy12061 224 TWFNVSEHVIGKEVDRYTG--RKEASIENVLVPWSTYEFKVIAGNELGY 270 (626)
Q Consensus 224 ~w~~~~~~~~~~~~~~~~~--~~~~~i~~~l~~~~~y~~~v~a~n~~g~ 270 (626)
...... ......+ ...+.|.+ +. +.+.|+|.|.|..+.
T Consensus 258 ~~~~~~------~~~~~~~~~~~~L~i~~-v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 258 HERRLP------AVRKVNRTFQADFPLGP-AT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp CCEEEE------CEECTTSCEEEEEECC--------CEEEEEEEBTTBT
T ss_pred CCCcee------ceeccCCceeEEEEcCC-cC--CCEEEEEEeecCCCc
Confidence 110000 0000011 12444444 66 899999999998764
No 144
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.89 E-value=1.2e-22 Score=219.30 Aligned_cols=255 Identities=16% Similarity=0.128 Sum_probs=127.8
Q ss_pred CCCC--ceEEEEeeeCCCCCCeeEEEeC--CEEccCC-CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceee-EEE
Q psy12061 2 AGEG--GNVTIFCNPEAAPKPKFVWKKD--GNIIGSG-GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRL 75 (626)
Q Consensus 2 ~~~G--~~~~l~C~~~g~p~p~i~W~~~--~~~i~~~-~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l 75 (626)
+.+| +.++|.|.+.+ |.+.+.|+|+ +..+..+ .+........|.|.+++.+|+|.|+|.|.+..+...+. ..+
T Consensus 138 v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~ 216 (772)
T 3v2a_R 138 ITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIV 216 (772)
T ss_dssp EESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEE
T ss_pred EecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEE
Confidence 4578 88999999987 7889999997 6665443 33333345579999999999999999999865443333 333
Q ss_pred EEEe--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccC-----CCeeEecCCeEEEee
Q psy12061 76 IVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE-----TPNINIDGGLLEITN 148 (626)
Q Consensus 76 ~v~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~i~~ 148 (626)
.+.. .|.+...++....+.+|++++|.|.+.+.+.+.+.+.|++++..+......... ..........|.|.+
T Consensus 217 ~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 296 (772)
T 3v2a_R 217 VVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDG 296 (772)
T ss_dssp EEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESS
T ss_pred EEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECc
Confidence 3432 223344455568999999999999999876666788999999886543210000 002223456899999
Q ss_pred cCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCce----EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCC
Q psy12061 149 ASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGV----QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNST 224 (626)
Q Consensus 149 ~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~----~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~ 224 (626)
++.+|+|.|+|.+.|..|..+..+.|.|..+|...... .........+.|.|.... .+ .....
T Consensus 297 v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~---~p----------~~~v~ 363 (772)
T 3v2a_R 297 VTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLG---YP----------PPEIK 363 (772)
T ss_dssp CCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------------------------------
T ss_pred CCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEee---eC----------CCeEE
Confidence 99999999999999999998999999999877543211 122233445666665321 11 11223
Q ss_pred ceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCC
Q psy12061 225 WFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273 (626)
Q Consensus 225 w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~ 273 (626)
|.+.+..+.. ...+.....+.+.. +...+.+.|+|.|.|..|....
T Consensus 364 W~~~g~~l~~--~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~ 409 (772)
T 3v2a_R 364 WYKNGIPLES--NHTIKAGHVLTIME-VSERDTGNYTVILTNPISKEKQ 409 (772)
T ss_dssp -------------------------------------------------
T ss_pred EEECCEeCCC--CceEccceeEEEec-CChhcCceEEEEEEECCcCeEE
Confidence 4433322211 01111223556655 8899999999999999886543
No 145
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.89 E-value=9.1e-23 Score=179.81 Aligned_cols=167 Identities=15% Similarity=0.243 Sum_probs=118.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCC--cEEEccCCcEEEccCCCCCCEEEEEEEEcCC-C--CceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENGNLLISPVSRDDSGIYSCTATNVH-G--MDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~--~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~-g--~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|. .+.|+|+|..+.... +.....+++|.|.+++.+|+|.|+|.|.|.. | .....+.|.
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~ 94 (198)
T 1ugn_A 16 ITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELV 94 (198)
T ss_dssp EETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEE
T ss_pred ccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEE
Confidence 468999999999999876 799999998774221 1112345689999999999999999999987 5 345668888
Q ss_pred EEeC--CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCCeEEEeecCC
Q psy12061 77 VLHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGGLLEITNASF 151 (626)
Q Consensus 77 v~~~--p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~ 151 (626)
|... ++.+...+ ...+.+|++++|.|.+.+. .+ .+.|+|+|..+...... ..... ..+.|.|.+++.
T Consensus 95 V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~g~~~~~~~~~----~~~~~~~~~~~~L~i~~v~~ 166 (198)
T 1ugn_A 95 VTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FD--GFILCKEGEDEHPQCLN----SQPHARGSSRAIFSVGPVSP 166 (198)
T ss_dssp EECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CS--EEEEEEC------CEEE----C------CCEEEEEECCCCT
T ss_pred EcccccCCccccCC-ccccCCCCcEEEEEecCCC-Cc--EEEEEECCCccCCcccc----ccccCCCcceeEEEecccCc
Confidence 8772 22233223 4678899999999999988 34 66999999887543210 00111 236899999999
Q ss_pred CCCEeEEEEEEeCCCc-----eEEEEEEEEe
Q psy12061 152 ADAGEYECVVKSTVGK-----ISTKTTVIVE 177 (626)
Q Consensus 152 ~d~g~Y~C~a~n~~g~-----~~~~~~l~v~ 177 (626)
+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 167 ~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 167 SRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp TSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred ccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 9999999999998763 2445566554
No 146
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.88 E-value=6e-23 Score=178.31 Aligned_cols=145 Identities=17% Similarity=0.207 Sum_probs=113.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC--ceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM--DESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~v~~ 79 (626)
|.+|++++|.|.+.+ |.+.+.|+|+|.. ....++.|.|.+++.+|+|.|+|.|.|..|. ....+.|.|..
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~W~k~g~~-------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 19 VPLEKPVTLRCQGPP-GVDLYRLEKLSSS-------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp EETTCCEEEEEECST-TCSEEEEEETTTC-------CEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEES
T ss_pred ccCCCcEEEEEeCCC-CCCEEEEEECCcc-------ccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecC
Confidence 568999999999988 7889999999865 2235678999999999999999999998764 23456777754
Q ss_pred ---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 80 ---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 80 ---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
+|.+... | ...+.+|++++|.|.+.+.+ + .+.|+|+|..+... .+.....+.|.|.+++.+|+|.
T Consensus 91 ~~~~p~i~~~-p-~~~v~~G~~v~l~C~~~~~~-~--~~~w~k~g~~~~~~-------~~~~~~~~~L~i~~v~~~D~G~ 158 (184)
T 2gi7_A 91 VFAKPSLSAQ-P-GPAVSSGGDVTLQCQTRYGF-D--QFALYKEGDPAPYK-------NPERWYRASFPIITVTAAHSGT 158 (184)
T ss_dssp SSCCCEEEEE-C-CCSSCCTTCEEEEEECSSCC-C--EEEEEECCCCTTSC-------CCCEEEEESSSEEEETTCCSEE
T ss_pred cCCCCEEEeC-C-CceecCCCcEEEEEEcCCCC-c--EEEEEECCCcCcce-------ecCCCceEEEEEccCCccCCeE
Confidence 3334333 3 45678999999999987665 2 67999999887542 1223356689999999999999
Q ss_pred EEEEEEeCCC
Q psy12061 157 YECVVKSTVG 166 (626)
Q Consensus 157 Y~C~a~n~~g 166 (626)
|+|.|.|..+
T Consensus 159 Y~C~a~n~~~ 168 (184)
T 2gi7_A 159 YRCYSFSSRD 168 (184)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEEeCCC
Confidence 9999999865
No 147
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.88 E-value=9.4e-22 Score=197.20 Aligned_cols=168 Identities=17% Similarity=0.238 Sum_probs=118.9
Q ss_pred CCCCceEEEEeeeCCCCC----CeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPK----PKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~----p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++++|.|.+.+.|. +.|.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 92 (438)
T 1qgc_4 13 VSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYYC 92 (438)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred eeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEEE
Confidence 578999999999999887 499999963 322 123566665432 69999999999999999
Q ss_pred EEEcCCCCc-eeeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC-----Cc
Q psy12061 61 TATNVHGMD-ESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-----NE 131 (626)
Q Consensus 61 ~a~n~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~-----~~ 131 (626)
.|.|..+.. ...+.|.|.. +|.+...++.. ....|+.++|.|.+.+.+++.++|.|+|||..+..... ..
T Consensus 93 ~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~ 171 (438)
T 1qgc_4 93 QQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQD 171 (438)
T ss_dssp EECSSTTCCBCCCEEEEECCCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCC
T ss_pred EEecCCCccccCceeEEecCCCCCCEEEecCCCh-hhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceecccccc
Confidence 999988753 3456777753 44444333332 23468899999999884333357799999999865410 00
Q ss_pred cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEE
Q psy12061 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171 (626)
Q Consensus 132 ~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~ 171 (626)
.....+ ...+.|.|.++..+|+|.|+|.|.|..|.....
T Consensus 172 ~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 210 (438)
T 1qgc_4 172 SKDSTY-SMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV 210 (438)
T ss_dssp TTTCCE-EEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE
T ss_pred CCCCcE-EEEEEEEEeCcccCCCCeEEEEEEecccCCcee
Confidence 001111 123579999999999999999999998875333
No 148
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.88 E-value=1.3e-22 Score=186.69 Aligned_cols=172 Identities=17% Similarity=0.219 Sum_probs=127.3
Q ss_pred CCCCceEEEEeeeCC---CCCCeeEEEeCCEEc------------------------------cCCCcEEEcc--CCcEE
Q psy12061 2 AGEGGNVTIFCNPEA---APKPKFVWKKDGNII------------------------------GSGGRRKIFE--NGNLL 46 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g---~p~p~i~W~~~~~~i------------------------------~~~~~~~~~~--~g~L~ 46 (626)
|.+|++++|.|.+.+ .|.|.|.|+|++... ...+|..+.. +.+|.
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~L~ 93 (250)
T 2fbo_J 14 VHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAPTLR 93 (250)
T ss_dssp ECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSCCEE
T ss_pred EecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcceEE
Confidence 578999999999987 788999999987543 1234555544 34799
Q ss_pred EccCCCCCCEEEEEEEEcCCCCc-----eeeEEEEEEeC---CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEe
Q psy12061 47 ISPVSRDDSGIYSCTATNVHGMD-----ESKGRLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118 (626)
Q Consensus 47 i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~---p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 118 (626)
|.+++.+|+|.|+|.|.|..+.. ...+.|.|..+ |.+...++....+.+|++++|.|.+.+.|.| .|.|+
T Consensus 94 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p--~v~W~ 171 (250)
T 2fbo_J 94 LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA--NVTWY 171 (250)
T ss_dssp ECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC--EEEEE
T ss_pred EeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC--eeEEE
Confidence 99999999999999999987753 34677888664 3333445667888899999999999998887 66999
Q ss_pred eCCEEeccccCC-----------------ccCCCeeEe-cCCeEEEeecCCCCCEeEEEEEEeCCC---ceEEEEEEE
Q psy12061 119 HNGVRIGNMDLN-----------------ELETPNINI-DGGLLEITNASFADAGEYECVVKSTVG---KISTKTTVI 175 (626)
Q Consensus 119 ~~~~~~~~~~~~-----------------~~~~~~~~~-~~~~l~i~~~~~~d~g~Y~C~a~n~~g---~~~~~~~l~ 175 (626)
|++..+....-. .....+... ..+.|.|.+++.+|+|.|+|.|.|..| .....+.|.
T Consensus 172 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 172 TGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp EEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred eCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 999877542100 000112222 457999999999999999999999655 444454443
No 149
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.88 E-value=8.3e-23 Score=181.99 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=120.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEE--EccCC--cEEEccCCCCCCEEEEEEEEcCCCCc--eeeEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK--IFENG--NLLISPVSRDDSGIYSCTATNVHGMD--ESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~--~~~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l 75 (626)
|.+|++++|.|.+.+ |.+.+.|+|+|..+....+.. ...++ +|.|.+++.+|+|.|+|.|.|..|.. .....|
T Consensus 20 v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l 98 (218)
T 1uct_A 20 IPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLEL 98 (218)
T ss_dssp EETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEE
T ss_pred cCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEE
Confidence 568999999999987 678999999987664322211 12345 89999999999999999999987643 334677
Q ss_pred EEEe--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 76 IVLH--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 76 ~v~~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
.|.. .++.+...| ...+.+|++++|.|.+.+.|.+ .+.|+|+|..+... .......+.|.|.+++.+|
T Consensus 99 ~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~--~~~W~k~g~~~~~~-------~~~~~~~~~L~I~~v~~~D 168 (218)
T 1uct_A 99 VVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFD--RFSLAKEGELSLPQ-------HQSGEHPANFSLGPVDLNV 168 (218)
T ss_dssp EEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCS--EEEEEETTCSSCCS-------EEECSSSEEEECCSCCGGG
T ss_pred EEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCC--EEEEEECCCccccc-------ccCCCccCEEEEccCCccc
Confidence 7765 223333334 4578999999999976666654 67999999876531 1122356789999999999
Q ss_pred CEeEEEEEEeCCC-----ceEEEEEEEEeCCC
Q psy12061 154 AGEYECVVKSTVG-----KISTKTTVIVEGPP 180 (626)
Q Consensus 154 ~g~Y~C~a~n~~g-----~~~~~~~l~v~~~P 180 (626)
+|.|+|.|.|..+ ..+..+.|.|.+.+
T Consensus 169 ~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 169 SGIYRCYGWYNRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp CEEEEEEEECTTSTTEECCCCCCEEEEEC---
T ss_pred CEEEEEEEEcCCCCCcCCCCCCcEEEEEecCC
Confidence 9999999998642 23556677776644
No 150
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.88 E-value=2.6e-22 Score=186.07 Aligned_cols=225 Identities=13% Similarity=0.143 Sum_probs=153.7
Q ss_pred CCCCceEEEEeeeCC-CCCC--eeEEEeCCEEccCCCcEEEccCCcEEEccC---CCCCCEE--EEEEEEcCCCCceeeE
Q psy12061 2 AGEGGNVTIFCNPEA-APKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPV---SRDDSGI--YSCTATNVHGMDESKG 73 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p--~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v---~~~d~G~--Y~C~a~n~~g~~~~~~ 73 (626)
+.+|++++|.|.+.| .|.| +|.|+|||..+.. .....++.|.|..+ +.+|+|. |+|.|.|..|.....+
T Consensus 15 v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~---~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~ 91 (265)
T 2oz4_A 15 LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ 91 (265)
T ss_dssp EETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC---EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred EecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc---eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEE
Confidence 578999999999999 7877 9999999999864 23334556777766 7788885 9999999999988889
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
.|.|...|..... +....+.+|++++|.|.+. |.| .+.| +|..+.... ..+.|.|..+...|
T Consensus 92 ~l~V~~~p~p~~~-~~~~~v~~G~~v~l~C~~~--p~~--~i~W--~g~~~~~~~-----------~~~~l~i~~~~~~~ 153 (265)
T 2oz4_A 92 TVTIYSFPAPNVI-LTKPEVSEGTEVTVKCEAH--PRA--KVTL--NGVPAQPLG-----------PRAQLLLKATPEDN 153 (265)
T ss_dssp EEEEECCCCCEEE-ESCSEEETTCEEEEEEECC--TTS--EEEE--SSCSSSCCS-----------SEECCEEECCGGGT
T ss_pred EEEEeCCCCceee-cCCceecCCCcEEEEEEcc--CCC--EEEE--CCEEccCCC-----------CcEEEEEccccccC
Confidence 9999874432222 3456788999999999998 554 5689 877774321 23568899999999
Q ss_pred CEeEEEEEEe-CCCceE---EEEEEEEeCCCCCCCce---EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCce
Q psy12061 154 AGEYECVVKS-TVGKIS---TKTTVIVEGPPGLPGGV---QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226 (626)
Q Consensus 154 ~g~Y~C~a~n-~~g~~~---~~~~l~v~~~P~~p~~~---~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~ 226 (626)
.|.|+|.|.| ..|... ..+.|.|..+|...... .........+.|.|... +.+. ....|.
T Consensus 154 ~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~---g~P~----------p~i~W~ 220 (265)
T 2oz4_A 154 GRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW---GNPL----------PELKCL 220 (265)
T ss_dssp TEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCE---EESC----------CEEEEE
T ss_pred CceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECc---cCCC----------CeEEEE
Confidence 9999999985 447665 67788888777542211 12223345555655521 1111 112233
Q ss_pred EeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
+...... ..+ .. .. +...+.+.|+|.|.|..|..
T Consensus 221 ~~~~~~~------~~g--~~--~~-v~~~d~G~Y~C~a~N~~G~~ 254 (265)
T 2oz4_A 221 KDGTFPL------PIG--ES--VT-VTRDLEGTYLCRARSTQGEV 254 (265)
T ss_dssp ETTTEEC------CTT--SC--EE-CCGGGCEEEEEEEEETTEEE
T ss_pred ECCcccC------CCC--cE--EE-eehhhCeEEEEEEECCCCcE
Confidence 3222100 011 11 22 77789999999999998854
No 151
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.88 E-value=1.6e-21 Score=174.35 Aligned_cols=181 Identities=25% Similarity=0.363 Sum_probs=146.1
Q ss_pred CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEE
Q psy12061 87 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEITNASFADAGEYECVVK 162 (626)
Q Consensus 87 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~ 162 (626)
.|.++.+..|++++|.|.+.+.|.| .+.|+|+|..+..... .++.+ ..+.|.|.+++.+|+|.|+|.|.
T Consensus 24 ~p~~~~~~~G~~v~l~C~~~g~p~p--~i~W~~~g~~l~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 24 GPVAVYTWEGNQVNITCEVFAYPSA--TISWFRDGQLLPSSNY-----SNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp CCSEEEECTTCCEEEEEEEEEESCC--EEEEEETTEESSCSSS-----CSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred CCceEEEECCCCEEEEEEEeecCCC--EEEEEECCeECCCCCC-----ccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 5677899999999999999999987 5589999999875421 22332 25689999999999999999999
Q ss_pred eCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCC-CCCCcccEEEEEEeecCCCCceEeecceeeeeeeccC
Q psy12061 163 STVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGA-TNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYT 241 (626)
Q Consensus 163 n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~-~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~ 241 (626)
|..|..+..+.|.+..+|.+|..+.+ .....++.|.|+.+. +++.++..|.|+++..+...|.......... .
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~-----~ 170 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA-----S 170 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHH-----H
T ss_pred ECCCceEEEEEEEECCCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccc-----c
Confidence 99999999999999999999988877 567788999999765 5667899999999999888887653221100 1
Q ss_pred CceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccC
Q psy12061 242 GRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNT 282 (626)
Q Consensus 242 ~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~ 282 (626)
....+.+.+ |.+++.|.|+|.|.|..|.+.++... .+.+
T Consensus 171 ~~~~l~i~~-L~~~~~y~~~~~A~N~~G~s~~S~~~-~v~T 209 (215)
T 3mtr_A 171 MEGIVTIVG-LKPETTYAVRLAALNGKGLGEISAAS-EFKT 209 (215)
T ss_dssp HHTEEEEEC-CCTTCEEEEEEEEEESSCBCCCCCCE-EEEC
T ss_pred ccccEEECC-CCCCCEEEEEEEEEeCCcccCcccce-eeEe
Confidence 113566766 99999999999999999999888765 3444
No 152
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=6.2e-22 Score=169.92 Aligned_cols=152 Identities=21% Similarity=0.333 Sum_probs=121.4
Q ss_pred CCCCceEEEEeeeCCCC-CCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAP-KPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.+.| .+.+.|+|+|..+..+ .+.|.|.+++.+|+|.|+|.|.|..+ ...+.|.|..+
T Consensus 16 v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~-------~~~~~~~~~~~~d~G~Y~C~~~~~~~--s~~~~l~v~~~ 86 (170)
T 3ry4_A 16 VLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH-------TQPSYRFKANNNDSGEYTCQTGQTSL--SDPVHLTVLFE 86 (170)
T ss_dssp EETTCEEEEEEESCCCSSSSCEEEEETTEECTTC-------CSSEEEEECCGGGCEEEEEEETTSBC--CCCEEEEEECC
T ss_pred EECCCcEEEEEEecCCCCcceEEEEECCeEcccC-------ccceEEEecccccCeEEEEEEeCCCc--eEeEEEEEECC
Confidence 56899999999999987 5799999999998654 34577889999999999999997543 44678888776
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|.... +....+.+|++++|.|.+.+.+++ ..+.|+++|..+.... .++.|.|.+++.+|+|.|+|.
T Consensus 87 ~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~g~~~~~~~-----------~~~~L~i~~v~~~d~G~Y~C~ 152 (170)
T 3ry4_A 87 WLVLQ--TPHLEFQEGETIMLRCHSWKDKPL-VKVTFFQNGKSQKFSH-----------LDPTFSIPQANHSHSGDYHCT 152 (170)
T ss_dssp SEEEE--CSCSEECTTCCEEEEEEEGGGCCE-EEEEEEETTEEEEEES-----------SCCEEEESSCCGGGCEEEEEE
T ss_pred ceEec--CCCceeecCCeEEEEEECCCCCCC-ceEEEEECCeEccccC-----------CCCeEEEEeccccCCEEEEEE
Confidence 65443 335678899999999999654432 4679999999875321 456899999999999999999
Q ss_pred EEeCCCc-eEEEEEEEE
Q psy12061 161 VKSTVGK-ISTKTTVIV 176 (626)
Q Consensus 161 a~n~~g~-~~~~~~l~v 176 (626)
|.|..|. .+..+.|.|
T Consensus 153 a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 153 GNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEETTEEEECCCEEEEE
T ss_pred EEeCcCccccccEEEEE
Confidence 9999986 455666665
No 153
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.88 E-value=3.1e-20 Score=182.92 Aligned_cols=454 Identities=12% Similarity=0.043 Sum_probs=254.0
Q ss_pred CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 88 PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 88 ~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
|.++.+....--.+.|.+.......-....... +... ...-+...+..+.|..+..+|- .++.. .-.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~ 75 (488)
T 2q7n_A 7 DKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDIC---IKDR-----FHSCHPLETTNVKIPALSPGDH-EVTIN--YLNGF 75 (488)
T ss_dssp --CCCCEESSSSEEEEECCCCSSSCCSCEEEEE---EESS-----SEEEEECSSSEEEEECCCSSCE-EEEEE--ESSSC
T ss_pred CccceeEecCceEEEEeeeCcCccCCCceEEEE---EecC-----CceeEEeccceeEcccCCCCcc-eEEEe--eccCc
Confidence 445555556666777776553322111111111 1100 0123445677999999988883 44433 23333
Q ss_pred eEEEEEEEEe-----CCCCCCCceEEEEE-eccceEEEEecCCCC-CCc-ccEEEEEEeecCC--CCceEeecceeeeee
Q psy12061 168 ISTKTTVIVE-----GPPGLPGGVQVVEV-HKTSATIQWTDGATN-GRP-ITHYKIIARTNWN--STWFNVSEHVIGKEV 237 (626)
Q Consensus 168 ~~~~~~l~v~-----~~P~~p~~~~~~~~-~~~~~~l~W~~~~~~-~~~-~~~y~v~~~~~~~--~~w~~~~~~~~~~~~ 237 (626)
...+++. ..|.+|.+|.+... ....+.|+|..+... ... -..|.|++..... ..|... .....
T Consensus 76 ---~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~-~~~~~--- 148 (488)
T 2q7n_A 76 ---QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPSNATWEIKVLQNPRTEPVALVL-LNTML--- 148 (488)
T ss_dssp ---EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSEEEEEEEECCCSSSSCSCCCEE-CCEEC---
T ss_pred ---eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccCCeEEEEEEEEeccceEEEEEE-EEEEe---
Confidence 3334433 34889999988655 468999999865432 111 2578888655433 223321 10000
Q ss_pred eccCCceeEEEEeec-cCCceEEEEEEEec----CCc---cCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEe
Q psy12061 238 DRYTGRKEASIENVL-VPWSTYEFKVIAGN----ELG---YGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWE 309 (626)
Q Consensus 238 ~~~~~~~~~~i~~~l-~~~~~y~~~v~a~n----~~g---~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~ 309 (626)
...+......-..++ .....|.+++++.. -.| ++.+|.+...-...+......|.+..+..+ ..++|...
T Consensus 149 ~~~~~~~~w~w~s~~pl~c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~~G--s~vtl~C~ 226 (488)
T 2q7n_A 149 SGKDTVQHWNWTSDLPLQCATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVLAG--SNMTICCM 226 (488)
T ss_dssp SSSCBCCEEEEECSSCCSSSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEESS--CCCEEEEC
T ss_pred cCCCceeEeeccCCCcccccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEcCC--CCEEEEEE
Confidence 000111233444422 33779999999986 233 444444421111112222234555444433 46777776
Q ss_pred eCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcce--eEEEEEEEEecCCCCCCCCccEEEEccC
Q psy12061 310 PLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYY--TEYEVKVQAINDVGPGPESEVVTIFSAE 387 (626)
Q Consensus 310 ~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~--~~Y~~~v~a~n~~g~~~~s~~~~~~t~~ 387 (626)
.. . + .|.|+..+... ... . -+.....++|.++... ..|.+ .+.+ .+... ..... .
T Consensus 227 a~--~----~----~I~W~~ng~~i-~~~---r-i~~~~~~L~I~nl~~sd~g~y~~--~C~~---~~~i~-~~~l~--v 283 (488)
T 2q7n_A 227 SP--T----K----VLSGQIGNTLR-PLI---H-LYGQTVAIHILNIPVSENSGTNI--IFIT---DDDVY-GTVVF--A 283 (488)
T ss_dssp CS--S----C----EEEEEETTEEC-CCE---E-CSSSCEEEECCSCCCCCSSCEEE--EEEE---SSCEE-EEEEE--E
T ss_pred CC--C----C----EEEEEECCEEC-chh---h-ccceEEEEEEeCCCcccCCcEEE--EEEc---CCeEE-EEEEE--e
Confidence 52 1 1 57777665211 100 1 1223456788888763 23444 3332 11111 11111 1
Q ss_pred CCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEE
Q psy12061 388 DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYV 467 (626)
Q Consensus 388 ~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v 467 (626)
..|+.+|.++.+...+..++.++|+++.+.+.. +..+..|.|+|+..+....-............+.+..+..++.|.|
T Consensus 284 ~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~-G~~~t~Y~L~y~~~g~~~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f 362 (488)
T 2q7n_A 284 GYPPDVPQKLSCETHDLKEIICSWNPGRITGLV-GPRNTEYTLFESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNF 362 (488)
T ss_dssp ECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCC-TTSSCEEEEEETTTCCEEEEECSSCCCSSCEEEEEECCSSCCCCEE
T ss_pred eCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCC-CCCceeEEEEEEECCCCCCCccccccCCceEEEEEcCCCCccEEEE
Confidence 244458999999888889999999997653100 0136789999865432210000000002234456654444699999
Q ss_pred EEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcccccee
Q psy12061 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~ 547 (626)
+|.|.|..|.++ + ...+.+...+++.||.++++...+.+++.|+|++ |...++.+.+|+|+|+..+...+. ....
T Consensus 363 ~V~A~N~~G~~~-S-~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~p--P~~~~g~~l~YeV~Yr~~~~~~w~-~~~~ 437 (488)
T 2q7n_A 363 TLTGRNPLGQAQ-S-AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYL--PGNFTKINLLCQIEICKANSKKEV-RNAT 437 (488)
T ss_dssp EEEEEETTEEEE-E-EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEE--EEECSSSEEEEEEEEBCTTSCCEE-EEEE
T ss_pred EEEEEeCCCCcc-c-eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeC--CCCCCCcceEEEEEEEECCCCCce-EEEE
Confidence 999999998843 4 4666666667778999999988889999999995 344567889999999865443211 1111
Q ss_pred eecCccceE--EecCCCCCceEEEEEEEEecCCCC---CCCCCcEEEeec
Q psy12061 548 IPVGNTLDA--DIVDLSPGKRYHMRVLAFSNGGDG---RMSSPAITFQMG 592 (626)
Q Consensus 548 ~~~~~~~~~--~l~~L~p~~~Y~~~V~a~~~~G~g---~~s~~~~~~~~~ 592 (626)
........+ .+.+|+|++.|.|+|+|.+ .|.| ++|++. .|+|.
T Consensus 438 ~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v-~~~T~ 485 (488)
T 2q7n_A 438 IRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEK-RHLTT 485 (488)
T ss_dssp EECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCC-CBCCC
T ss_pred EecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCE-eEECC
Confidence 111123445 9999999999999999999 8885 666443 45554
No 154
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.88 E-value=9.4e-23 Score=177.12 Aligned_cols=143 Identities=15% Similarity=0.273 Sum_probs=109.5
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEcc-CCCCCCEEEEEEEEcCCCCceeeEEEEEEe--
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISP-VSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 79 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~-- 79 (626)
.+|++++|.|.+.| |+ .|.|+|||..|..+ .+++|.|.+ ++.+|+|.|+|.|.|..|.......+.|..
T Consensus 12 ~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~ 83 (186)
T 1jbj_A 12 ISGTSVELTCPLDS-DE-NLKWEKNGQELPQK------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSAD 83 (186)
T ss_dssp EETTEEEEECSSCC-CT-TCEEEETTEEECSC------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCC
T ss_pred eCCcEEEEEEeCCC-CC-ceEEEECCEECCCC------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEeccc
Confidence 47999999999988 44 49999999999754 355799999 999999999999999999855555554433
Q ss_pred CCcee-------------------eeCCCce---EEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCee
Q psy12061 80 GPSYY-------------------EQLPPKI---TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI 137 (626)
Q Consensus 80 ~p~~~-------------------~~~~~~~---~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~ 137 (626)
+|... ....... .+.+|++++|.|.+ |.| +|.|+|||..+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p--~i~W~k~g~~i~~~~--------- 149 (186)
T 1jbj_A 84 DAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDK--TIKWLKDGSIISPLN--------- 149 (186)
T ss_dssp CCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCS--CEEEEETTEECCCSS---------
T ss_pred ccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCC--eEEEEECCEECcccC---------
Confidence 22100 0000112 23499999999998 554 569999999986432
Q ss_pred EecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 138 NIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 138 ~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
...+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 150 -~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 150 -ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp -CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred -CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 156789999999999999999999998875
No 155
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.88 E-value=2.4e-22 Score=189.26 Aligned_cols=175 Identities=19% Similarity=0.191 Sum_probs=139.0
Q ss_pred CCCCceEEEEeeeCCCCCCe-eEEEe-CCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEE-cCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-FVWKK-DGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTAT-NVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-i~W~~-~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~-n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.+.|.+. +.|++ ++..+..+.++.+..+++|.|.+++.+|+|.|+|.|. |..+.....+.|.|.
T Consensus 101 v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 101 VVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp EETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEE
Confidence 46899999999999987765 99986 8888888888888888899999999999999999999 555556677889998
Q ss_pred e----CCceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 79 H----GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 79 ~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
. +|.+. ..+....+.+|++++|.|.+.+ .|.+ .+.|++++..+........ ........+.|.|.+++.+|
T Consensus 181 ~~~~~~p~i~-~~~~~~~~~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d 256 (289)
T 3ejj_X 181 RVHPEPPQIK-LEPSKLVRIRGEAAQIVCSATNAEVGF--NVILKRGDTKLEIPLNSDF-QDNYYKKVRALSLNAVDFQD 256 (289)
T ss_dssp SSCCCCCEEE-EESSSEECCSSSCEEEEEEEEESSSCC--EEEEEETTEECCCCEEEEE-CSSSEEEEEEEEESSCCSSS
T ss_pred ECCCCCCeEE-ecCCceEEEeCCcEEEEEEeCCCCCce--EEEEEECCEEeeccCCccc-ccceEEeeEEEEEEeecccC
Confidence 3 44444 4566777789999999999998 5554 6699999998865321000 01112245689999999999
Q ss_pred CEeEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 154 AGEYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
+|.|+|.|.|..|..++++.|.+..++
T Consensus 257 ~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 257 AGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp CEEEEEEEECSSCEEEEEEEEECC---
T ss_pred CEEEEEEEEcCCCCccccEEEEEEecc
Confidence 999999999999999999999987655
No 156
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.88 E-value=5.7e-21 Score=168.47 Aligned_cols=177 Identities=20% Similarity=0.362 Sum_probs=138.8
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEE
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
..+| +|.++.+...+.+++.|+|+++.. +.+.+|.|+|+..+....... .........+.+.+|+|++.|.
T Consensus 21 ~~~P--~P~~l~~~~~~~~sv~lsW~~p~~------~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~ 91 (203)
T 2gee_A 21 MEVP--QPTDLSFVDITDSSIGLRWTPLNS------STIIGYRITVVAAGEGIPIFE-DFVDSSVGYYTVTGLEPGIDYD 91 (203)
T ss_dssp SCCC--CCEEEEEECCTTTCEEEEEECCSS------SSCCEEEEEEEESSSSSCCEE-EEEETTCCEEEECSCCTTCEEE
T ss_pred ccCc--CCCccEEEecCCCEEEEEecCCCC------CCccEEEEEEEECCCCCCcee-EEcCCCccEEEeCCCCCCCEEE
Confidence 3455 688999999999999999998862 458899999987765433222 2334556679999999999999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccce
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~ 546 (626)
|+|+|.|..|.|..+ .+.+....| +|.++++...+.+++.|+|++ |. ++.+.+|.|+|+..+... ....
T Consensus 92 ~~V~a~~~~g~s~~~---~~~t~~~~p--~P~~l~~~~~~~~sv~l~W~~--p~--~~~i~~Y~v~~~~~~~~~--~~~~ 160 (203)
T 2gee_A 92 ISVYTVKNGGESTPT---TLTQQTAVP--PPTDLRFTNIGPDTMRVTWAP--PP--SIDLTNFLVRYSPVKNEE--DVAE 160 (203)
T ss_dssp EEEEEESSSCBCCCE---EEEEECCCC--CCEEEEEEEEETTEEEEEEEC--CS--SCCCSEEEEEEEETTCGG--GCEE
T ss_pred EEEEEEeCCCccccE---eeeecCCCc--CCCceEEEEcCCCEEEEEEcC--CC--CCCccEEEEEEEECCCCC--ccEE
Confidence 999999988876544 455555544 688999999999999999994 42 468999999988744321 1234
Q ss_pred eeecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 547 ~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
.......+.+.|.+|.|++.|.|+|+|+|..|.|+++
T Consensus 161 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 161 LSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp EEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 4556788999999999999999999999999998865
No 157
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=189.71 Aligned_cols=244 Identities=15% Similarity=0.219 Sum_probs=158.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC---CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|. |.|++++.. +..+..+ ++|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 16 v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~ 86 (292)
T 4dkd_C 16 VKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK 86 (292)
T ss_dssp ECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEEC
T ss_pred EcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEc
Confidence 5689999999999984 999976542 2233322 379999999999999999999998888888899998
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC-CEEeccccCCccCCCeeE-ecCCeEEEeecCCCCCEe
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNMDLNELETPNIN-IDGGLLEITNASFADAGE 156 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~g~ 156 (626)
.+|......+....+.+|++++|.|.+.+ |.+...+.|+++ +..+... .+.. ..++.|.|.+++.+|+|.
T Consensus 87 ~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~ 158 (292)
T 4dkd_C 87 DPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRH-------TNYSFSPWHGFTIHRAKFIQSQD 158 (292)
T ss_dssp CSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSS-------CCEECCSSSCCEETTCCGGGCSE
T ss_pred CccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccC-------CcccccCCceEEECCCCHHHCeE
Confidence 88776566678899999999999999998 543346799987 5554332 2222 244569999999999999
Q ss_pred EEEEEEeCCCce-EEEEEEEEeCCCC-CCCceEEEE-----EeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEee
Q psy12061 157 YECVVKSTVGKI-STKTTVIVEGPPG-LPGGVQVVE-----VHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS 229 (626)
Q Consensus 157 Y~C~a~n~~g~~-~~~~~l~v~~~P~-~p~~~~~~~-----~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~ 229 (626)
|+|.+.|..|.. +..+.|.|...+. +| .+.... .....+.|.|..... +. .+.+.+...+...- ..
T Consensus 159 Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p-~i~~~~~~~~~~~g~~v~l~C~~~~~---~~-~~~~~w~~~~~~~~--~~ 231 (292)
T 4dkd_C 159 YQCSALMGGRKVMSISIRLKVQKVIPGPP-ALTLVPAELVRIRGEAAQIVCSASSV---DV-NFDVFLQHNNTKLA--IP 231 (292)
T ss_dssp EEEEECSTTSCEECCCEEEEEECCCCSSC-EEEEESSCBCCCSSSCEEEEEEEEES---SS-CCEEECCBSSCCCC--CC
T ss_pred EEEEEEeCCCceeEEEEEEEEeCCCCCCC-eEEccCCceeEecCCCEEEEEEecCC---CC-ceEEEEeCCCcccc--cC
Confidence 999999988865 4478888886433 22 222211 234556666664211 11 12222222211000 00
Q ss_pred cceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 230 EHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.... .....+.....+.|.+ +...+.+.|+|.|.|..|..
T Consensus 232 ~~~~-~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 232 QQSD-FHNNRYQKVLTLNLDQ-VDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp BEEE-EETTEEEEEEEEEESS-CCTTSCEEEEEEEECSSCEE
T ss_pred ccce-eccceeeeEEEEEECc-cChhcCeEEEEEEecCCCCc
Confidence 0000 0000011112455555 88999999999999999864
No 158
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.88 E-value=2.9e-22 Score=191.12 Aligned_cols=166 Identities=20% Similarity=0.314 Sum_probs=129.7
Q ss_pred CCCCceEEEEeeeC-CCCCCeeEEEeCCEEccCCCcEEEccCCc-----EEEccCCCCCCEEEEEEEEcCCCCceeeEEE
Q psy12061 2 AGEGGNVTIFCNPE-AAPKPKFVWKKDGNIIGSGGRRKIFENGN-----LLISPVSRDDSGIYSCTATNVHGMDESKGRL 75 (626)
Q Consensus 2 ~~~G~~~~l~C~~~-g~p~p~i~W~~~~~~i~~~~~~~~~~~g~-----L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 75 (626)
+.+|++++|.|.+. |.|.|.+.|+|+|.++..+.++.+..++. |.|.+++.+|+|.|+|.|.|..+. ....+
T Consensus 119 v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~ 196 (312)
T 2y23_A 119 ILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT--NHSTV 196 (312)
T ss_dssp ECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCE--EEEEE
T ss_pred EeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCce--EEEEE
Confidence 56899999999999 88999999999999998888777765432 999999999999999999865443 33333
Q ss_pred EEE---------------------eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCC
Q psy12061 76 IVL---------------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELET 134 (626)
Q Consensus 76 ~v~---------------------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~ 134 (626)
.+. .+|.+... ....+..|++++|.|.+.+.|.| ..+.|+|+|..+.....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~v~~G~~~~l~C~~~~~p~~-~~v~W~~~g~~~~~~~~----- 268 (312)
T 2y23_A 197 VLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY--LSWEVTGECNVLLKCKVANIKKE-THIVWYKDEREISVDEK----- 268 (312)
T ss_dssp EECTHHHHHHHHHHHHHHHHHHHHHSSEEEEE--EEEEEETTTEEEEEEEEESCCSS-CEEEEEETTEEEEEECC-----
T ss_pred EEcchhhhhhcccccccccchhhccCCceeec--ceEEEeCCCEEEEEEEEcCCCCC-CEEEEeeCCEECCCCCc-----
Confidence 331 12433321 23788999999999999999876 25699999999975421
Q ss_pred CeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 135 ~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
..+......|.|.+++.+|+|.|+|.|.|..|..+..+.|.++
T Consensus 269 ~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 269 HDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp C----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 1112233699999999999999999999999999999888764
No 159
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.88 E-value=2.3e-21 Score=170.94 Aligned_cols=185 Identities=15% Similarity=0.194 Sum_probs=147.0
Q ss_pred CCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEE
Q psy12061 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 287 p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
++.+|.++.+...+.+++.|+|+++ ....+.++.+|.|+|+..+...|...... .....+.+.+|.|++.|.|+|
T Consensus 5 ~P~~P~~l~~~~~~~~sv~l~W~~p-~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~----~~~~~~~~~~L~p~t~Y~~~V 79 (197)
T 3lpw_A 5 TPGPPQDLKVKEVTKTSVTLTWDPP-LLDGGSKIKNYIVEKRESTRKAYSTVATN----CHKTSWKVDQLQEGCSYYFRV 79 (197)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECC-SCCTTSCCCEEEEEEEETTCSSCEEEEEE----ECSSEEEECCCCTTCEEEEEE
T ss_pred CCCCCCCcEEEEecCCEEEEEEcCC-ccCCCCcccEEEEEEEECCCCccEEeecC----CCccEEEEcCCCCCCEEEEEE
Confidence 3468889998888899999999983 33444568999999998887777655432 234568899999999999999
Q ss_pred EEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEE
Q psy12061 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~ 446 (626)
+|.|..|.+.++....+.+....|. +|.++++...+.+++.|+|++|...+ ++.+.+|.|+|+..+...+....
T Consensus 80 ~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~~~---~~~i~~Y~v~~~~~~~~~~~~~~-- 153 (197)
T 3lpw_A 80 LAENEYGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEKPEHDG---GSRILGYIVEMQTKGSDKWATCA-- 153 (197)
T ss_dssp EEEETTEECCCEECSSCEESCCCCC-CCSCEEEEEECSSCEEEEECCCSCCT---TSCCCEEEEEEEETTCSCCEEEE--
T ss_pred EEEcCccccCCCCCccceecCCCCC-CCcccEEEeccCCeEEEEecCCCcCC---CCcccEEEEEEEeCCCCceEEee--
Confidence 9999999988876665666666665 88899999899999999999876432 24689999999877655433222
Q ss_pred ecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCcc
Q psy12061 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483 (626)
Q Consensus 447 ~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~ 483 (626)
.....++.+.+|.|++.|.|+|+|.|..|.|++|..
T Consensus 154 -~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 189 (197)
T 3lpw_A 154 -TVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQL 189 (197)
T ss_dssp -EESSSEEEECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred -cccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence 234566999999999999999999999999887754
No 160
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.88 E-value=6.9e-22 Score=188.25 Aligned_cols=249 Identities=16% Similarity=0.144 Sum_probs=157.6
Q ss_pred CCCCceEEEEeeeCCCCCC-----eeEEEeCCEEc-------------cCCCcEEEcc--------CCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-----KFVWKKDGNII-------------GSGGRRKIFE--------NGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-----~i~W~~~~~~i-------------~~~~~~~~~~--------~g~L~i~~v~~~d~ 55 (626)
+..|++|+|.|.+.+.|.+ .|.|+|+|... ....|..+.. +++|.|.+++.+|+
T Consensus 12 ~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 91 (313)
T 4fqp_A 12 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDE 91 (313)
T ss_dssp CBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGC
T ss_pred EecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhC
Confidence 5789999999999887765 49999987532 2344555432 35799999999999
Q ss_pred EEEEEEEEc-CCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEec-ccCCcceeEEEeeCCEEeccccCCccC
Q psy12061 56 GIYSCTATN-VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELE 133 (626)
Q Consensus 56 G~Y~C~a~n-~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~ 133 (626)
|.|+|.|.+ ..|.....+.|.|..+|..... +....+..|+.+.|.|.+. +.|.| .+.|++++..+.........
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~-~~~~~~~~~~~~~~~C~~~~~~P~~--~i~W~~~~~~~~~~~~~~~~ 168 (313)
T 4fqp_A 92 GNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAE-VQKVQLTGEPVPMARCVSTGGRPPA--QITWHSDLGGMPNTSQVPGF 168 (313)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCBBCCEEEEE-ECCBCCCSSCEEEEEEEEEEEBSCC--EEEEEETTCCEEEEEEEECS
T ss_pred EEEEEEEeeccCcceeeeeeeeeccCCcceec-ccceEeecCceEEEEEEccCccCCc--EEEeecCCccccccceeeee
Confidence 999998864 4556666778888777766553 4455677889999999876 56665 56999998887643210000
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce--EEEEEEEEeCCCCC---CCceEEEEEeccceEEEEecCCCCCC
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGR 208 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~--~~~~~l~v~~~P~~---p~~~~~~~~~~~~~~l~W~~~~~~~~ 208 (626)
........+.|.|..+...|.|.|+|.|.|..+.. +..+.|.|..+|.. +.... .......+.|.|..
T Consensus 169 ~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~-~~~~g~~v~l~C~~------ 241 (313)
T 4fqp_A 169 LSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNN-WYLGQNEATLTCDA------ 241 (313)
T ss_dssp STTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSC-EETTCCCEEEEEEE------
T ss_pred cccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccce-eecCCCeEEEEEEe------
Confidence 01111112468899999999999999999987764 44455555544421 00000 01122345555542
Q ss_pred cccEEEEEEeecC-CCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 209 PITHYKIIARTNW-NSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 209 ~~~~y~v~~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...+.. ...|.+.+..+..... .....+.|.+ +...+.+.|+|.|.|..|..
T Consensus 242 -------~g~P~p~~v~W~~~~~~l~~~~~---~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~ 294 (313)
T 4fqp_A 242 -------RSNPEPTGYNWSTTMGPLPPFAV---AQGAQLLIRP-VDKPINTTLICNVTNALGAR 294 (313)
T ss_dssp -------EEESCCCEEEEEETTBSCCTTEE---EETTEEEECC-CSSCCEEEEEEEEECSSCEE
T ss_pred -------cCCCCCcEEEEEECCEECCCceE---EeCCEEEECc-CChhhCEEEEEEEEeCCCcE
Confidence 111111 1234443332211110 1112466655 99999999999999999854
No 161
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.88 E-value=1.8e-21 Score=170.18 Aligned_cols=156 Identities=17% Similarity=0.239 Sum_probs=116.0
Q ss_pred CCCCceEEEEeeeCC-CCCCeeEEEeCCEEcc---C-----------C----CcEEEccCCcEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEA-APKPKFVWKKDGNIIG---S-----------G----GRRKIFENGNLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~i~W~~~~~~i~---~-----------~----~~~~~~~~g~L~i~~v~~~d~G~Y~C~a 62 (626)
+.+|++|+|.|.+.+ .+.+.|.|+|+|..|. . + +|..+..+++|.|.+++.+|+|.|+|.|
T Consensus 10 ~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~~ 89 (193)
T 2if7_A 10 GILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQI 89 (193)
T ss_dssp EETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCEEEEEEE
T ss_pred EEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCceEEEEE
Confidence 578999999999976 4567999999987552 1 1 3667777889999999999999999999
Q ss_pred EcCCCCceeeEEEEEEeCCceeeeCCCceEEecCC-cEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC
Q psy12061 63 TNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHR-NLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG 141 (626)
Q Consensus 63 ~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~-~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 141 (626)
.|..+.....+.|.|..+|..............|. +++|.|.+.+.++ .++|.|+++|..+.. +
T Consensus 90 ~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p-~p~i~W~~~g~~l~~--------------~ 154 (193)
T 2if7_A 90 STKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADD-NVSFRWEALGNTLSS--------------Q 154 (193)
T ss_dssp ECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCT-TCEEEEEETTEEEES--------------S
T ss_pred EecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCC-ceEEEEEeCCEEcCC--------------C
Confidence 99988877778899976543221111112234565 8999999998542 236799999987642 3
Q ss_pred CeEEEeecCCC-CCEeEEEEEEeCCCceEEEE
Q psy12061 142 GLLEITNASFA-DAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 142 ~~l~i~~~~~~-d~g~Y~C~a~n~~g~~~~~~ 172 (626)
+.|.|...... |+|.|+|.|.|..|..+..+
T Consensus 155 ~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 155 PNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp SEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred CeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 45777655554 89999999999999876543
No 162
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.88 E-value=6.5e-23 Score=182.99 Aligned_cols=171 Identities=23% Similarity=0.353 Sum_probs=131.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEc------------cCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC-
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNII------------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM- 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i------------~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~- 68 (626)
+.+|++++|.|.+.|.|.+.|.|+|++..+ ....|+.+. +++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 16 v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~Y~C~~~~~~g~~ 94 (209)
T 1nbq_A 16 IPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGTYTCMVSEEGGNS 94 (209)
T ss_dssp EETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSEEEEEEEETTSSC
T ss_pred EEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcEEEEEEecCCCCc
Confidence 578999999999999999999999987652 223555554 378999999999999999999998763
Q ss_pred -ceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCC--ccCCCeeE--ecCC
Q psy12061 69 -DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLN--ELETPNIN--IDGG 142 (626)
Q Consensus 69 -~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~--~~~~~~~~--~~~~ 142 (626)
....+.|.|..+|.+... +....+..|++++|.|.+ .+.|.| .+.|++++..+...... .....++. ...+
T Consensus 95 ~~~~~~~l~V~~~p~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (209)
T 1nbq_A 95 YGEVKVKLIVLVPPSKPTV-NIPSSATIGNRAVLTCSEQDGSPPS--EYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTG 171 (209)
T ss_dssp EECCEEECCEEBCCCCCCC-CCBSEEETTSCEEECCCCCSCBSCC--EEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTC
T ss_pred cceEEEEEEEecCCcCCCc-ccccceecCCEEEEEEeCCCCCCCc--eeEEEECCeeCCCccccceeeeccceEEcCCcc
Confidence 345678888887776543 445678999999999997 888876 56999999988754211 00111122 2567
Q ss_pred eEEEeecCCCCCEeEEEEEEeCCCce--EEEEEEEE
Q psy12061 143 LLEITNASFADAGEYECVVKSTVGKI--STKTTVIV 176 (626)
Q Consensus 143 ~l~i~~~~~~d~g~Y~C~a~n~~g~~--~~~~~l~v 176 (626)
.|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 172 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 172 ELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp CEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred eEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 99999999999999999999999987 44444444
No 163
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.88 E-value=6.4e-21 Score=165.98 Aligned_cols=168 Identities=14% Similarity=0.276 Sum_probs=131.2
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEe
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~ 472 (626)
+|.++++...+.+++.|+|++|. +.+.+|.|+|+..+.. ............+.+.+|+|++.|.|+|+|.
T Consensus 9 ~P~~l~~~~~~~~sv~l~W~~p~-------~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 78 (186)
T 1qr4_A 9 NPKDLEVSDPTETTLSLRWRRPV-------AKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILRGLDAGTEYTISLVAE 78 (186)
T ss_dssp CCEEEEEESCCSSEEEEEEECCS-------SCCSEEEEEEECTTCC---EEEEEECTTCSEEEEESCCSSCEEEEEEEEE
T ss_pred CCCceEEEecCCCEEEEEEeCCC-------CCccEEEEEEEeCCCC---eeEEECCCCCCEEEECCCCCCCEEEEEEEEE
Confidence 88999999999999999999884 4578999999744321 1222334456679999999999999999999
Q ss_pred eCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCc
Q psy12061 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGN 552 (626)
Q Consensus 473 ~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~ 552 (626)
|..|.+... .+.+.|. +.+|.++++...+.+++.|+|+ +|. +.+.+|.|.|+..+.. ..........
T Consensus 79 ~~~~~s~~~-~~~~~t~----p~~P~~l~~~~~~~~sv~l~W~--~p~---~~i~~Y~v~~~~~~~~---~~~~~~~~~~ 145 (186)
T 1qr4_A 79 KGRHKSKPT-TIKGSTV----VGSPKGISFSDITENSATVSWT--PPR---SRVDSYRVSYVPITGG---TPNVVTVDGS 145 (186)
T ss_dssp SSSCBCCCE-EEEEECC----CCCCSCEEEESCCSSCEEEEEC--CCS---SCCSEEEEEEEETTCC---CCEEEEEETT
T ss_pred cCCccCCCE-EEEEECC----CCCCCccEEEEeCCCEEEEEEE--CCC---CcccEEEEEEEeCCCC---CceEEEcCCC
Confidence 976665542 3444553 3477899999889999999999 442 6799999998876542 1334455667
Q ss_pred cceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 553 TLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 553 ~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
.+++.+.+|.|++.|.|+|+|.+..|.|++.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 176 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPI 176 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCE
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE
Confidence 8999999999999999999999999888754
No 164
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.88 E-value=2.2e-22 Score=179.99 Aligned_cols=170 Identities=18% Similarity=0.213 Sum_probs=124.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe--CCEEcc------------CCCcEEEcc---CCcEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK--DGNIIG------------SGGRRKIFE---NGNLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~i~------------~~~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.|.|.+.|.|+| ++..+. ..+|+.+.. +++|.|.+++.+|+|.|+|.|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 91 (213)
T 3mj8_L 12 VALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSWD 91 (213)
T ss_dssp EETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred EeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEecc
Confidence 5689999999999999999999998 222110 234666433 33699999999999999999999
Q ss_pred CCC---CceeeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCC---ccCC
Q psy12061 65 VHG---MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN---ELET 134 (626)
Q Consensus 65 ~~g---~~~~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~---~~~~ 134 (626)
..+ .....+.|.|. .+|.+... +....+..|++++|.|.+.+.+++.+.+.|+|||..+...... ....
T Consensus 92 ~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 170 (213)
T 3mj8_L 92 GTNSAWVFGSGTKVTVLGQPNAAPSVTLF-PPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSD 170 (213)
T ss_dssp TTTTEEEEBCCEEEEEECSCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEET
T ss_pred CCcceeEEcCceEEEEeCCCCCCCeEEcc-CCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccC
Confidence 988 34556888888 45555443 3333444899999999999975554578999999998643100 0011
Q ss_pred CeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEE
Q psy12061 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173 (626)
Q Consensus 135 ~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~ 173 (626)
..+. ..+.|.|.++..+|.|.|+|.|.|..+.....+.
T Consensus 171 ~~~~-~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 171 SKYM-ATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp TEEE-EEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CcEE-EEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 1222 2356999999999999999999999877665553
No 165
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.88 E-value=3.8e-23 Score=223.28 Aligned_cols=171 Identities=18% Similarity=0.268 Sum_probs=60.7
Q ss_pred CCCCceEEEEeeeCC--CCCCeeEEEeCCEEccCCCcEE-----------EccCCcEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPEA--APKPKFVWKKDGNIIGSGGRRK-----------IFENGNLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g--~p~p~i~W~~~~~~i~~~~~~~-----------~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|++++|.|.+.+ .|.+.+.|++++..+....... ....++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 236 v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 315 (772)
T 3v2a_R 236 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 315 (772)
T ss_dssp EETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCE
T ss_pred EecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcc
Confidence 468999999999988 4567999999998865432221 112346999999999999999999999998
Q ss_pred ceeeEEEEEEeCCceeeeC--CCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEE
Q psy12061 69 DESKGRLIVLHGPSYYEQL--PPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEI 146 (626)
Q Consensus 69 ~~~~~~l~v~~~p~~~~~~--~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 146 (626)
....+.|.|..+|.+...+ +....+.+|++++|.|.+.+.|.|. +.|+|+|..+... .++. ....|.|
T Consensus 316 ~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~--v~W~~~g~~l~~~-------~~~~-~~~~L~i 385 (772)
T 3v2a_R 316 KKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPE--IKWYKNGIPLESN-------HTIK-AGHVLTI 385 (772)
T ss_dssp EEEEEEEEEECCCC------------------------------------------------------------------
T ss_pred eeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCe--EEEEECCEeCCCC-------ceEc-cceeEEE
Confidence 8888999998888654332 3467889999999999999988764 5899999988652 1111 4578999
Q ss_pred eecCCCCCEeEEEEEEeCCCce--EEEEEEEEeCCCCC
Q psy12061 147 TNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGL 182 (626)
Q Consensus 147 ~~~~~~d~g~Y~C~a~n~~g~~--~~~~~l~v~~~P~~ 182 (626)
.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|..
T Consensus 386 ~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~ 423 (772)
T 3v2a_R 386 MEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQI 423 (772)
T ss_dssp --------------------------------------
T ss_pred ecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcc
Confidence 9999999999999999998865 45567777777654
No 166
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.87 E-value=3.6e-22 Score=189.88 Aligned_cols=251 Identities=16% Similarity=0.170 Sum_probs=156.1
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEc---------------c--CCCcEEEc----cCCcEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNII---------------G--SGGRRKIF----ENGNLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i---------------~--~~~~~~~~----~~g~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++++|.|.+.+. |.+.|.|+|++... . ..+|..+. .+++|.|.+++.+|+|.|+
T Consensus 11 v~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 90 (308)
T 4fom_A 11 AVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYI 90 (308)
T ss_dssp EETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEEE
T ss_pred EEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEEE
Confidence 5689999999999765 44589999964321 1 12344442 2357999999999999999
Q ss_pred EEEEcC-CCCceeeEEEEEEeCCcee-eeCCCceEEecCCcEEEEEEe-cccCCcceeEEEeeCCEEeccccCCccCCCe
Q psy12061 60 CTATNV-HGMDESKGRLIVLHGPSYY-EQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNELETPN 136 (626)
Q Consensus 60 C~a~n~-~g~~~~~~~l~v~~~p~~~-~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~ 136 (626)
|.|.|. .|.....+.+.+...|... ...+.......|+.+.|.|.+ .+.|.| .+.|++++..+........ ..
T Consensus 91 C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~--~i~W~~~~~~~~~~~~~~~--~~ 166 (308)
T 4fom_A 91 CKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVA--HIDWEGDLGEMESTTTSFP--NE 166 (308)
T ss_dssp EEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCC--EEEECCCSSBCCEEEEECT--TS
T ss_pred EEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCc--eEEEEECCcccccccceee--ee
Confidence 999986 4556666777777766543 334556666788999999975 567765 5689999988865421111 11
Q ss_pred eEecCCeEEEeecCCCCCEeEEEEEEeCCCce--EEEEEEEEeCCCCCC---CceEEEEEeccceEEEEecCCCCCCccc
Q psy12061 137 INIDGGLLEITNASFADAGEYECVVKSTVGKI--STKTTVIVEGPPGLP---GGVQVVEVHKTSATIQWTDGATNGRPIT 211 (626)
Q Consensus 137 ~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~--~~~~~l~v~~~P~~p---~~~~~~~~~~~~~~l~W~~~~~~~~~~~ 211 (626)
.....+.|.|.++...|.|.|+|.|.|..|.. +..+.|.|..+|... ..... ......+.|.|... +.+.
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~-~~~g~~v~l~C~~~---g~P~- 241 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNW-FVGRKGVNLKCNAD---ANPP- 241 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCE-ETTCCSCEEECCEE---EESC-
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceee-eeccccEEEEEEEe---cCCC-
Confidence 11233579999999999999999999987765 444555555554321 11111 12233455554421 1110
Q ss_pred EEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 212 HYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 212 ~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
-.. ..|.+.+..+... ....+. ...+...+...+.+.|+|.|.|..|...
T Consensus 242 p~~--------v~W~k~~~~~~~~--~~~~~~-~~l~i~~v~~~d~G~Y~C~A~N~~G~~~ 291 (308)
T 4fom_A 242 PFK--------SVWSRLDGQWPDG--LLASDN-TLHFVHPLTFNYSGVYICKVTNSLGQRS 291 (308)
T ss_dssp EEE--------EECCBSSSCCCSS--CBCSTT-EEECCSCCCSCCCSEEEEEEEETTEEEE
T ss_pred CcE--------EEEEECCeECCCc--EEEcCC-eEEEECCCChhhCEEEEEEEEeCCCcEE
Confidence 001 1233322222110 011222 3333344888999999999999999653
No 167
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.87 E-value=4.7e-23 Score=195.96 Aligned_cols=171 Identities=15% Similarity=0.208 Sum_probs=135.3
Q ss_pred CCCCceEEEEeee-CCCCCCeeEEEeCCEEccCCCcEEE----ccCCcEEEccCCCCCCEEEEEEEEcCCCCcee--eEE
Q psy12061 2 AGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKI----FENGNLLISPVSRDDSGIYSCTATNVHGMDES--KGR 74 (626)
Q Consensus 2 ~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~i~~~~~~~~----~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~ 74 (626)
+.+|+.+.|.|.+ .|.|.|.|.|+|++.++........ ...+.|.|..+..+|+|.|+|.|.|..|.... .+.
T Consensus 126 ~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~ 205 (308)
T 4fom_A 126 DGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFI 205 (308)
T ss_dssp TTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEE
Confidence 3568999999986 6889999999999988853221110 01135999999999999999999998877544 456
Q ss_pred EEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCC
Q psy12061 75 LIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 154 (626)
Q Consensus 75 l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 154 (626)
|.|..+|.+...+.....+..|++++|.|.+.+.|.| ..+.|+|++..+.... ...++..|.|.+++.+|+
T Consensus 206 l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p-~~v~W~k~~~~~~~~~--------~~~~~~~l~i~~v~~~d~ 276 (308)
T 4fom_A 206 LDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPP-FKSVWSRLDGQWPDGL--------LASDNTLHFVHPLTFNYS 276 (308)
T ss_dssp CCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCE-EEEECCBSSSCCCSSC--------BCSTTEEECCSCCCSCCC
T ss_pred EEEecCCeeEEcccceeeeeccccEEEEEEEecCCCC-cEEEEEECCeECCCcE--------EEcCCeEEEECCCChhhC
Confidence 6777788777666677788899999999999999877 3579999998875431 122344567889999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 277 G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 277 GVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp SEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999999999999999999999884
No 168
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.87 E-value=4.4e-23 Score=199.05 Aligned_cols=172 Identities=17% Similarity=0.177 Sum_probs=136.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC-CcEEEccCCcEEEccCCCCCCE-EEEEEEEcCCCCceeeEEEEEEe
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENGNLLISPVSRDDSG-IYSCTATNVHGMDESKGRLIVLH 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~-~~~~~~~~g~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~v~~ 79 (626)
+.+|++++|.|.+.|.|.|.|.|++++..+... .+.....+++|.|.+++.+|+| .|+|.|.|..|.....+.|.|..
T Consensus 170 v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~ 249 (347)
T 2ifg_A 170 VDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF 249 (347)
T ss_dssp CBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC
Confidence 679999999999999999999999998765422 2223344568999999999999 99999999999988888888877
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCC----eeEecCCeEEEeecCCCCCE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETP----NINIDGGLLEITNASFADAG 155 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~----~~~~~~~~l~i~~~~~~d~g 155 (626)
+|.+.. ..+..|++++|.|.+.|.|.| +|.|+++|..+........... ......+.|.|.+++.+|+|
T Consensus 250 ~P~i~~-----~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 322 (347)
T 2ifg_A 250 PASVQL-----HTAVEMHHWCIPFSVDGQPAP--SLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNG 322 (347)
T ss_dssp EEEEEE-----CCCEESSSEEEEEEEEEESCC--EEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCE
T ss_pred CCeeee-----ccCccCceEEEEEEeeecCCC--cEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCc
Confidence 776411 124689999999999999887 5589999999875421000000 00012457999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
.|+|.|.|..|..+..+.|.|..+|
T Consensus 323 ~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 323 NYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp EEEEEEEETTEEEEEEEEECSCCCC
T ss_pred eEEEEEecCCCceeeEEEEEecCCC
Confidence 9999999999999999999988776
No 169
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.87 E-value=3.9e-22 Score=173.81 Aligned_cols=163 Identities=14% Similarity=0.189 Sum_probs=118.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC--ceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM--DESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~v 77 (626)
|.+|++|+|.|.+.+. .+.+.|+|+|..+... .......+++|.|.+++.+|+|.|+|.|.|..+. ....+.|.|
T Consensus 15 v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V 93 (188)
T 1oll_A 15 VPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVV 93 (188)
T ss_dssp EETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEE
T ss_pred CCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEe
Confidence 5689999999999764 5699999999887421 1111123457999999999999999999987553 244577888
Q ss_pred Ee---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCC
Q psy12061 78 LH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 154 (626)
Q Consensus 78 ~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 154 (626)
.. +|.+.. .| ...+.+|++++|.|.+.+.+ + .+.|+|+|..+... .......+.|.|.+++.+|+
T Consensus 94 ~~~~~~p~i~~-~p-~~~v~~G~~v~L~C~~~~~~-~--~~~w~k~g~~~~~~-------~~~~~~~~~L~I~~v~~~d~ 161 (188)
T 1oll_A 94 TEMYDTPTLSV-HP-GPEVISGEKVTFYCRLDTAT-S--MFLLLKEGRSSHVQ-------RGYGKVQAEFPLGPVTTAHR 161 (188)
T ss_dssp ESCSCCCEEEE-ES-CSEEETTCEEEEEEECSSSC-S--EEEEEEESSSCEEE-------EEECSSEEEEEEEECCGGGC
T ss_pred cccCCCCeEEE-CC-CCccccCCEEEEEEEcCCCC-C--EEEEEECCcccccc-------ccCCCceeEEEECCCCcCCC
Confidence 64 444443 33 45689999999999987653 3 67999998776431 11122457899999999999
Q ss_pred EeEEEEEEeCCC---ceEEEEEEEEe
Q psy12061 155 GEYECVVKSTVG---KISTKTTVIVE 177 (626)
Q Consensus 155 g~Y~C~a~n~~g---~~~~~~~l~v~ 177 (626)
|.|+|.|.|... ..+..+.|.|.
T Consensus 162 G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 162 GTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEEEEECEEETTEECCCCCCEEEEEE
T ss_pred cEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 999999998652 23455566554
No 170
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.87 E-value=2e-21 Score=192.48 Aligned_cols=213 Identities=18% Similarity=0.220 Sum_probs=149.8
Q ss_pred EEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCcc--
Q psy12061 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEE-- 440 (626)
Q Consensus 363 ~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~-- 440 (626)
.+.+.|.|..+.......... ...|+.+|.++.. ..+.+++.|+|++|...+. ..+.+|.|+|+.......
T Consensus 309 s~~C~C~ng~~ra~~d~~~~~---ct~pPsaP~nl~~-~vs~tSv~LsW~pP~~~gG---~~i~~Y~V~~~~~~~~~~~~ 381 (536)
T 3fl7_A 309 ATSCECEEGFFRAPQDPASMP---CTRPPSAPHYLTA-VGMGAKVELRWTPPQDSGG---REDIVYSVTCEQCWPESGEC 381 (536)
T ss_dssp CSSCEECTTCBCCTTCCTTSC---CBCCCCCBSCEEE-ECCTTSEEEEECCBSCCCS---CSCCEEEEEEEEECC-CCCE
T ss_pred ccEEEEeccccccCCCccccc---cccCCCcccceEE-EecCCEEEEEEeCCcCCCC---CceeEEEEEEEeccCCCCcc
Confidence 356778888876543322211 1124458889854 6889999999999875431 258999999986432110
Q ss_pred ----ceEEE---EecCccceEEEeCCccCceEEEEEEEeeCCCC---CCCCccEEEeecCCCCCCCCceEEEeeeCCCEE
Q psy12061 441 ----TAVYY---LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE---GPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510 (626)
Q Consensus 441 ----~~~~~---~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~---s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~ 510 (626)
..... ........+++.+|+|++.|.|+|+|.|..|. ++.+..+.+.|.+.. |..+.+...+.+++
T Consensus 382 ~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~----Ps~~~~~~~s~tSV 457 (536)
T 3fl7_A 382 GPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE----PPKVRLEGRSTTSL 457 (536)
T ss_dssp EECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC----CCEEEEEECCC-CC
T ss_pred cccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC----CCCCceeeccCCeE
Confidence 00111 12234567999999999999999999999887 456777777776544 44555677789999
Q ss_pred EEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEe
Q psy12061 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQ 590 (626)
Q Consensus 511 ~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~ 590 (626)
.|+|+ +|...++.|.+|.|+|+..+.. ..........+++.|.+|+|++.|.|+|+|.|.+|.|++|.+ +.++
T Consensus 458 ~LsW~--pP~~~ng~I~~Y~V~y~~~~~~----~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~-v~~~ 530 (536)
T 3fl7_A 458 SVSWS--IPPPQQSRVWKYEVTYRKKGDS----NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKV-HEFQ 530 (536)
T ss_dssp EEEEE--CCTTTTTTCSEEEEEEEEC--C----CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCC-EEEE
T ss_pred EEEEE--CCcCCCCcccEEEEEEEECCCC----ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCC-EEEE
Confidence 99999 6677899999999999876554 222344567789999999999999999999999999999965 4566
Q ss_pred ecc
Q psy12061 591 MGE 593 (626)
Q Consensus 591 ~~~ 593 (626)
|.+
T Consensus 531 T~~ 533 (536)
T 3fl7_A 531 TLS 533 (536)
T ss_dssp CCC
T ss_pred eCC
Confidence 653
No 171
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.87 E-value=3.3e-22 Score=188.66 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=136.8
Q ss_pred CCCCceEEEEeeeCCCCC--CeeEEEeC-CEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCcee-eEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPK--PKFVWKKD-GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES-KGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~--p~i~W~~~-~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~v 77 (626)
+.+|+.++|.|.+.+ |. |.|.|+++ +..+..+.++.+..++.|.|.+++.+|+|.|+|.|.|..+...+ .+.|.|
T Consensus 101 v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 179 (292)
T 4dkd_C 101 VFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKV 179 (292)
T ss_dssp EETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEE
T ss_pred EcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEE
Confidence 568999999999998 55 78999997 77777777877777788999999999999999999998776544 788888
Q ss_pred Ee----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 78 LH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 78 ~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
.. +|.+.. .+....+..|++++|.|.+.+.|. .+.+.|++++..+...........+. ...+.|.|.+++.+|
T Consensus 180 ~~~~~~~p~i~~-~~~~~~~~~g~~v~l~C~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d 256 (292)
T 4dkd_C 180 QKVIPGPPALTL-VPAELVRIRGEAAQIVCSASSVDV-NFDVFLQHNNTKLAIPQQSDFHNNRY-QKVLTLNLDQVDFQH 256 (292)
T ss_dssp ECCCCSSCEEEE-ESSCBCCCSSSCEEEEEEEEESSS-CCEEECCBSSCCCCCCBEEEEETTEE-EEEEEEEESSCCTTS
T ss_pred eCCCCCCCeEEc-cCCceeEecCCCEEEEEEecCCCC-ceEEEEeCCCcccccCccceecccee-eeEEEEEECccChhc
Confidence 86 555544 466667789999999999998775 45789999988765432101111111 133589999999999
Q ss_pred CEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 154 AGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
+|.|+|.|.|..|..+..+.|.|......+
T Consensus 257 ~G~Y~C~a~N~~g~~~~~~~l~V~~~~~~~ 286 (292)
T 4dkd_C 257 AGNYSCVASNVQGKHSTSMFFRVVESAGNS 286 (292)
T ss_dssp CEEEEEEEECSSCEEEEEEEECC-------
T ss_pred CeEEEEEEecCCCCceeEEEEEEeeCCCcc
Confidence 999999999999999999999988766544
No 172
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.87 E-value=3.2e-22 Score=175.86 Aligned_cols=156 Identities=16% Similarity=0.213 Sum_probs=106.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcE--EEccCCcEEEccCCCCCCEEEEEEEEcCCCCc--eeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR--KIFENGNLLISPVSRDDSGIYSCTATNVHGMD--ESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~--~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 77 (626)
|.+|++++|.|.+.+.|. .+.|+|+|..+....+. ....++.|.|.+++.+|+|.|+|.|.|..|.. ...+.|.|
T Consensus 16 v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V 94 (196)
T 2d3v_A 16 ISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVV 94 (196)
T ss_dssp EETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEE
T ss_pred ccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEe
Confidence 568999999999998876 99999999887532211 11234579999999999999999999987643 34578888
Q ss_pred EeC--CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCCeEEEeecCCC
Q psy12061 78 LHG--PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGGLLEITNASFA 152 (626)
Q Consensus 78 ~~~--p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~ 152 (626)
... ++.+...| ...+.+|++++|.|.+.+.| + .+.|+|+|..+...... ..... ..+.|.|.+++.+
T Consensus 95 ~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~--~~~W~k~g~~~~~~~~~----~~~~~~~~~~~~L~I~~v~~~ 166 (196)
T 2d3v_A 95 TGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-D--RFILTEEGDHKLSWTLD----SQLTPSGQFQALFPVGPVTPS 166 (196)
T ss_dssp ECSSCCCEEEC------------CEEEEEESSCC-S--EEEEEEC---CCEEEEE----CEECTTSCEEEEEECCCCBTT
T ss_pred cCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-C--EEEEEccCCcccccccc----cccccCCCceeEEEeeecCcc
Confidence 763 22333223 35789999999999999988 4 56999999887532100 01111 2368999999999
Q ss_pred CCEeEEEEEEeCCC
Q psy12061 153 DAGEYECVVKSTVG 166 (626)
Q Consensus 153 d~g~Y~C~a~n~~g 166 (626)
|+|.|+|.|.|..+
T Consensus 167 D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 167 HRWMLRCYGSRRHI 180 (196)
T ss_dssp BCEEEEEEEEETTE
T ss_pred cCeeEEEEEEccCC
Confidence 99999999999865
No 173
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.87 E-value=5.9e-22 Score=177.14 Aligned_cols=165 Identities=16% Similarity=0.247 Sum_probs=119.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
+.+|++++|.|.+.|.|.|.|.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 92 (213)
T 3d9a_L 13 VTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSN 92 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeeec
Confidence 578999999999999999999999843 221 113566665433 799999999999999999999
Q ss_pred CCCCcee-eEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-cC----CccCCC
Q psy12061 65 VHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-DL----NELETP 135 (626)
Q Consensus 65 ~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~~----~~~~~~ 135 (626)
..+.... .+.|.|.. +|.+...++... +..|++++|.|.+.+.+++.+.+.|+|||..+... .. ......
T Consensus 93 ~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~-~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 171 (213)
T 3d9a_L 93 SWPYTFGGGTKLEIKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 171 (213)
T ss_dssp SSSCEECCCEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred CCcceeCCCEEEEEecCCCCceeEeECCChh-hcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCC
Confidence 8876433 45777765 455544433332 34799999999999844434578999999998754 10 000011
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+. ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 172 ~~~-~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 172 TYS-MSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp CEE-EEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CEE-EEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 111 23489999999999999999999987664
No 174
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.87 E-value=9.3e-22 Score=175.29 Aligned_cols=165 Identities=19% Similarity=0.284 Sum_probs=118.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.|.|.|.|.|+|+ |..+ ....|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 91 (210)
T 1lk3_L 12 VSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSW 91 (210)
T ss_dssp ECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEEc
Confidence 57899999999999999899999984 2222 123566665433 799999999999999999999
Q ss_pred CCCCcee-eEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-c----CCccCCC
Q psy12061 65 VHGMDES-KGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-D----LNELETP 135 (626)
Q Consensus 65 ~~g~~~~-~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~----~~~~~~~ 135 (626)
..+.... .+.|.|.. +|.+...++... +..|++++|.|.+.+.+++.+++.|+|||..+... . .......
T Consensus 92 ~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 170 (210)
T 1lk3_L 92 NGPLTFGAGTKLELKRADAAPTVSIFPPSTE-QLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDS 170 (210)
T ss_dssp SSSCEECCCEEEEECCCCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTC
T ss_pred CCCceeCCCEEEEEcCCCcCCeEEEECCchh-hccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCC
Confidence 8775433 45777755 455544434332 34799999999999855444678999999988654 1 0000001
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+ ...+.|.|.++..+|+|.|+|.|.|.....
T Consensus 171 ~~-~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 171 TY-SMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CE-EEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CE-EEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 11 112379999999999999999999987643
No 175
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.87 E-value=8.9e-20 Score=180.27 Aligned_cols=309 Identities=16% Similarity=0.199 Sum_probs=188.5
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCC------CcccEEEEEEeecCCCC
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG------RPITHYKIIARTNWNST 224 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~------~~~~~y~v~~~~~~~~~ 224 (626)
..+...|...+.|..|. ...+.+.-...|.||.++.+.... ..+.|+|++|.... ...+.|.|+|+..+ ..
T Consensus 81 ~~~~~~~~v~~~~~~~~-~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~ 157 (419)
T 2gys_A 81 VTDVDYFSFQPDRPLGT-RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DS 157 (419)
T ss_dssp TTCEEEEEEEESSCCCE-EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SC
T ss_pred eecccEEEEeCCccccc-cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CC
Confidence 34445555555555443 222222223589999999987655 69999999876432 24678999999886 67
Q ss_pred ceEeecceeeeeeeccCCceeEEEE-eeccCCceEEEEEEEecCC---ccCCCCCCCC--cccCCCCCCCCCCceeEeec
Q psy12061 225 WFNVSEHVIGKEVDRYTGRKEASIE-NVLVPWSTYEFKVIAGNEL---GYGEPSSPSP--QYNTPADKPYQAPSRIGGGG 298 (626)
Q Consensus 225 w~~~~~~~~~~~~~~~~~~~~~~i~-~~l~~~~~y~~~v~a~n~~---g~~~~s~~~~--~~~~~~~~p~~~p~~~~~~~ 298 (626)
|....... .......+. .+|.|++.|.++|+|.|.. +.+.+|..+. .+.+.... +.+|.++....
T Consensus 158 w~~~~~~~--------~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~ 228 (419)
T 2gys_A 158 WEDAAILL--------SNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFF 228 (419)
T ss_dssp STTCEEEE--------ESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEE
T ss_pred hhheeeec--------ccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEE
Confidence 76543210 011223332 1499999999999999964 3345544332 34455555 46889999998
Q ss_pred CCcCeEEEEEeeCCCCCcccCcceEEEEEEecCC-C----c-ceeeeeeeec------ceeeEEEEeCCCcceeEEEEEE
Q psy12061 299 GKIGDLSISWEPLPREKQNAPNIYYKIFWRKKND-T----E-FQSETLKEYG------NVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 299 ~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~-~----~-~~~~~~~~~~------~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
.....|.+.|++. ....+ ...|.|.|+.... + . +......... ......+.+.+|.+.+.|.++|
T Consensus 229 ~~~~~l~c~W~~~--~~~~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V 305 (419)
T 2gys_A 229 DGAAVLSCSWEVR--KEVAS-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSV 305 (419)
T ss_dssp CSSSEEEEEEEEE--HHHHT-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEE
T ss_pred CCceEEEeEEECC--CCCCC-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEE
Confidence 8889999999983 22222 3569999986532 1 1 2221111110 0123456788899999999999
Q ss_pred EEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEE
Q psy12061 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~ 446 (626)
.|.+..+. +.....+.+.|| .+.+.. ..+++.|+|++|.... ...+.+|.|+|+..+..-.......
T Consensus 306 ~a~~~~~~--------~~~~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~~---~~~~l~Yev~y~~~~~~w~~~~~~~ 372 (419)
T 2gys_A 306 QPRRAEKH--------IKSSVNIQMAPP-SLQVTK-DGDSYSLRWETMKMRY---EHIDHTFEIQYRKDTATWKDSKTET 372 (419)
T ss_dssp EECCCCEE--------EEGGGSBCCCCC-EEEEC----CCCEEEEEC-----------CEEEEEEEECSSSCSTTSCEEE
T ss_pred EEccCCcc--------ccceEEEEECCC-CeEEEE-eCCeEEEEECCCcccc---cccceEEEEEEEcCCCCcceeeccc
Confidence 99765431 222222333355 466554 4789999999985421 1247799999988764311111111
Q ss_pred ecCccceEEEeCCccCceEEEEEEEeeCCC--C---CCCCccEEEee
Q psy12061 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAG--E---GPESERYLERT 488 (626)
Q Consensus 447 ~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g--~---s~~s~~~~~~t 488 (626)
.. ..+++.|.+|+|++.|.|+|+|.+..| . |++|..+.+.|
T Consensus 373 ~~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 373 LQ-NAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp EE-SCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cc-cccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 12 456799999999999999999999863 3 36677666655
No 176
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.87 E-value=2.4e-21 Score=192.00 Aligned_cols=220 Identities=19% Similarity=0.224 Sum_probs=154.8
Q ss_pred CCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecC--
Q psy12061 254 PWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKN-- 331 (626)
Q Consensus 254 ~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-- 331 (626)
....+.+.|.|.|..++............ |+.+|.++.. ..+.+++.|+|+++ ...++.++..|.|+|+..+
T Consensus 304 s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~----pPsaP~nl~~-~vs~tSv~LsW~pP-~~~gG~~i~~Y~V~~~~~~~~ 377 (536)
T 3fl7_A 304 PSPEGATSCECEEGFFRAPQDPASMPCTR----PPSAPHYLTA-VGMGAKVELRWTPP-QDSGGREDIVYSVTCEQCWPE 377 (536)
T ss_dssp CCCTTCSSCEECTTCBCCTTCCTTSCCBC----CCCCBSCEEE-ECCTTSEEEEECCB-SCCCSCSCCEEEEEEEEECC-
T ss_pred CCCCCccEEEEeccccccCCCcccccccc----CCCcccceEE-EecCCEEEEEEeCC-cCCCCCceeEEEEEEEeccCC
Confidence 44556788999999998765544333322 4567888854 57889999999983 3333347999999999743
Q ss_pred CCcceee-----eeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCC---CCCCccEEEEccCCCCCCCCCceEEEeee
Q psy12061 332 DTEFQSE-----TLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIFSAEDMPQVAPQGVFSRGFN 403 (626)
Q Consensus 332 ~~~~~~~-----~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~---~~~s~~~~~~t~~~~p~~~p~~~~~~~~~ 403 (626)
...|... ............+++.+|.|++.|.|+|.|.|..|. +..+..+.+.|.+. +|..+.....+
T Consensus 378 ~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~----~Ps~~~~~~~s 453 (536)
T 3fl7_A 378 SGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT----EPPKVRLEGRS 453 (536)
T ss_dssp CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC----CCCEEEEEECC
T ss_pred CCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc----CCCCCceeecc
Confidence 1222110 001111223567889999999999999999999987 44566677777555 44566667788
Q ss_pred cceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCcc
Q psy12061 404 STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESER 483 (626)
Q Consensus 404 ~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~ 483 (626)
.+++.|+|++|... +|.|.+|.|+|+..+.. .. .........+++|.+|+|++.|.|+|+|.|..|.|++|..
T Consensus 454 ~tSV~LsW~pP~~~----ng~I~~Y~V~y~~~~~~-~~--~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~ 526 (536)
T 3fl7_A 454 TTSLSVSWSIPPPQ----QSRVWKYEVTYRKKGDS-NS--YNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKV 526 (536)
T ss_dssp C-CCEEEEECCTTT----TTTCSEEEEEEEEC--C-CC--CEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCC
T ss_pred CCeEEEEEECCcCC----CCcccEEEEEEEECCCC-ce--EEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCC
Confidence 89999999988543 37799999999877654 21 1223445567999999999999999999999999999999
Q ss_pred EEEeecC
Q psy12061 484 YLERTYR 490 (626)
Q Consensus 484 ~~~~t~~ 490 (626)
+.++|..
T Consensus 527 v~~~T~~ 533 (536)
T 3fl7_A 527 HEFQTLS 533 (536)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998864
No 177
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.87 E-value=3.2e-22 Score=215.55 Aligned_cols=285 Identities=12% Similarity=0.124 Sum_probs=155.4
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEec--------------CCCcceeeeeeeecce------ee
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKK--------------NDTEFQSETLKEYGNV------GI 348 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~--------------~~~~~~~~~~~~~~~~------~~ 348 (626)
..|.++.+...+.+++.|+|+++. ...+.++.+|.|+|+.. +...|........... ..
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~-~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~ 548 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYW-PPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNH 548 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCC-SSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSC
T ss_pred cceeEEEEEEEecCeEEEEecCCC-CCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCccccccccccc
Confidence 355678888889999999999843 24456899999999875 2345654433211110 24
Q ss_pred EEEEeCCCcceeEEEEEEEE-ecCCCC----CCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccce
Q psy12061 349 AVVRIPSEFYYTEYEVKVQA-INDVGP----GPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG 423 (626)
Q Consensus 349 ~~~~~~~L~p~~~Y~~~v~a-~n~~g~----~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~ 423 (626)
..+.+.+|.|++.|.|+|+| .|..|. |.+|....++|.+++|. +|.++.+...+.+++.|+|++|... +|
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps-~P~~l~~~~~s~tsI~LsW~pP~~~----nG 623 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPS-VPLDPISVSNSSSQIILKWKPPSDP----NG 623 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCC-CCEEEEEEECSSSCEEEEEECCCCS----SS
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCc-CCcceEEEeCCCCEEEEEEeCCCCC----CC
Confidence 66889999999999999999 999997 78898888999888887 8999999999999999999998543 36
Q ss_pred eeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEe
Q psy12061 424 RLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIK 503 (626)
Q Consensus 424 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~ 503 (626)
.|.+|.|+|+......... .........|.|++.|.|+|.|.+..+.++.+......+....|..+ ..+. .
T Consensus 624 ~I~~Y~V~~~~~~~~~~~~-------~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p-~~~~-~ 694 (897)
T 2dtg_E 624 NITHYLVFWERQAEDSELF-------ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTD-SQIL-K 694 (897)
T ss_dssp SCSEEECCEEEECCCCSCT-------TCSSSCSCCCCCC-----------------------------------------
T ss_pred CeeEEEEEEEECCCCccce-------ecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcc-cchh-h
Confidence 7999999987766532111 11112234588999999999999987765443322222222334433 3443 4
Q ss_pred eeCCCEEEEEEeecCCCCCCCceeeEE---EEEE--Eecc--CCccccceeeecCccceEEecCCCCCceEEEEEEEEec
Q psy12061 504 GINPTTVHVTWRYVSPSFEEEPIIGYK---VRVW--EVDQ--DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN 576 (626)
Q Consensus 504 ~~~~~~~~l~W~~~~~~~~~~~i~~Y~---i~~~--~~~~--~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~ 576 (626)
..+.+++.++|++ +.. + .+..+. ..+. .... .... ..........+++.+.+|.|++.|.|+|+|+|.
T Consensus 695 ~~~~~s~~~~W~~--~~~-n-~v~~~~p~~~r~~l~~~~n~t~~~~-~~~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~ 769 (897)
T 2dtg_E 695 ELEESSFRKTFED--YLH-N-VVFVPRPSRKRRSLGDVGNAGNNEE-HRPFEKVVNKESLVISGLRHFTGYRIELQACNQ 769 (897)
T ss_dssp ---------------------------------------------C-CSCSCEECSCSEEEECSSCSSCEEEECCEEESC
T ss_pred hhhhhheeeeEEE--ccC-c-eEEccCCCcccccccccccccCccc-cceEEecCCceEEEECCCCCCcEEEEEEEEEeC
Confidence 5677899999994 321 1 111110 0000 0000 0000 011123345678999999999999999999999
Q ss_pred CCCCCC-C-CCcEEEeecc
Q psy12061 577 GGDGRM-S-SPAITFQMGE 593 (626)
Q Consensus 577 ~G~g~~-s-~~~~~~~~~~ 593 (626)
.|.|++ | +..+.+++.+
T Consensus 770 ~G~g~~~s~s~~v~~~T~~ 788 (897)
T 2dtg_E 770 DTPEERCSVAAYVSARTMP 788 (897)
T ss_dssp SSSSCCBCCCCCEEEECCC
T ss_pred CCCCCCCCCCceeEEeccC
Confidence 999875 2 2334555543
No 178
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.87 E-value=1.5e-21 Score=174.60 Aligned_cols=200 Identities=17% Similarity=0.208 Sum_probs=147.3
Q ss_pred CCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCC-cceeEEEE
Q psy12061 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSE-FYYTEYEV 364 (626)
Q Consensus 286 ~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~p~~~Y~~ 364 (626)
.|+.+|.++.+...+..++.|+|+++ .+.+. ..+|.|+|+..+...+.... .......+.+.+| .+++.|.|
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p--~~~~~-~~~Y~v~~~~~~~~~~~~~~----~~~~~~~~~i~~L~~~~t~Y~~ 78 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGG--RETHL-ETNFTLKSEWATHKFADCKA----KRDTPTSCTVDYSTVYFVNIEV 78 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECC--SCCSS-CCEEEEEEEETTEECCCEEC----CSSCTTEEECSSCCCTTSCEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCC--CCCCC-CceEEEEEEEcCCCcccccc----ccCCcceEEEcCCccccccEEE
Confidence 35578999998887778999999983 33333 47999999876532222111 1223356789999 99999999
Q ss_pred EEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEee--ecceEEEEeeeccccccccceeeEEEEEEEEecCCCccce
Q psy12061 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF--NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA 442 (626)
Q Consensus 365 ~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~--~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~ 442 (626)
+|.|.|..|.+. +....+.+....++.+|.++.+... +.+++.|+|++|... ++.+.+|.|+|+..+...+..
T Consensus 79 ~V~A~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~----~~~i~~Y~v~y~~~~~~~~~~ 153 (215)
T 1bqu_A 79 WVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIK----SVIILKYNIQYRTKDASTWSQ 153 (215)
T ss_dssp EEEEEETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGG----GTSCEEEEEEEEETTCSSCEE
T ss_pred EEEEEecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCC----CcceEEEEEEEccCCCCCceE
Confidence 999999999876 5555565555445558989988765 678999999988753 367999999998876443321
Q ss_pred EEE-EecCccceEEEeCCccCceEEEEEEEeeCCCCCC---CCccEEEeecCCCCCCCC
Q psy12061 443 VYY-LSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGP---ESERYLERTYRKAPQKPP 497 (626)
Q Consensus 443 ~~~-~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~---~s~~~~~~t~~~~p~~~p 497 (626)
... ........+.|.+|+|++.|.|+|+|.|..|.|+ +|..+.++|.+.+|..+|
T Consensus 154 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~~P~~~p 212 (215)
T 1bqu_A 154 IPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKEP 212 (215)
T ss_dssp CCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCCHHHHHH
T ss_pred eccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccccCCcCCC
Confidence 110 0134456799999999999999999999988855 677788899888776544
No 179
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.86 E-value=5.2e-21 Score=168.80 Aligned_cols=176 Identities=16% Similarity=0.263 Sum_probs=132.0
Q ss_pred CCCceEEEeee--cceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEE
Q psy12061 393 APQGVFSRGFN--STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVM 470 (626)
Q Consensus 393 ~p~~~~~~~~~--~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~ 470 (626)
+|.++++..++ .+++.|+|++|. ++.+.+|.|+|+......... ..........+.|.+|+|++.|.|+|+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~------~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 74 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ------PSHISKYILRWRPKNSVGRWK-EATIPGHLNSYTIKGLKPGVVYEGQLI 74 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS------STTCCEEEEEEEETTCSSCCE-EEEECTTCCEEEECSCCTTEEEEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC------CCCceEEEEEEEECCCCCceE-EEecCCCccEEEecCCCCCCEEEEEEE
Confidence 57899888877 899999999983 145899999998765432222 222344456799999999999999999
Q ss_pred EeeCCCCCCCCccEEEeecCC-----------CCCCCC----ceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEE
Q psy12061 471 AYNNAGEGPESERYLERTYRK-----------APQKPP----SAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWE 535 (626)
Q Consensus 471 a~~~~g~s~~s~~~~~~t~~~-----------~p~~~p----~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~ 535 (626)
|.|..|.|..+ .+.+.|... .|..+| .++++...+.+++.|+|+ +| ++.|.+|.|+|+.
T Consensus 75 a~n~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~--~p---~~~i~~Y~v~~~~ 148 (201)
T 2ha1_A 75 SIQQYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWV--SA---SDTVSGFRVEYEL 148 (201)
T ss_dssp EECTTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECC--CS---CTTEEEEEEEEEE
T ss_pred EEecccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEe--CC---CCCccEEEEEEEE
Confidence 99999988754 445555432 133233 456777788999999999 44 4689999999885
Q ss_pred eccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCC
Q psy12061 536 VDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMS 583 (626)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s 583 (626)
.+.... ........+.+++.|.+|.|++.|.|+|+|+|..|.|++.
T Consensus 149 ~~~~~~--~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~ 194 (201)
T 2ha1_A 149 SEEGDE--PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLI 194 (201)
T ss_dssp TTTCCC--CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEE
T ss_pred CCCCCc--eeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccE
Confidence 433221 2334456778999999999999999999999999988755
No 180
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.86 E-value=5.5e-21 Score=163.73 Aligned_cols=152 Identities=20% Similarity=0.269 Sum_probs=116.8
Q ss_pred CCCCceEEEEeeeC--CCCCCeeEEEe--CCEEc----------cCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCC
Q psy12061 2 AGEGGNVTIFCNPE--AAPKPKFVWKK--DGNII----------GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHG 67 (626)
Q Consensus 2 ~~~G~~~~l~C~~~--g~p~p~i~W~~--~~~~i----------~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g 67 (626)
+.+|++|+|.|... +.|.+.|.|+| ++..| ..++|+.++.+|+|.|.+++.+|+|.|+|.|.|..|
T Consensus 11 g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g 90 (182)
T 1hnf_A 11 GALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKG 90 (182)
T ss_dssp EETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEETTS
T ss_pred EecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEeCCC
Confidence 57899999999653 35677999999 99887 357899999999999999999999999999999988
Q ss_pred Cce--eeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEE
Q psy12061 68 MDE--SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLE 145 (626)
Q Consensus 68 ~~~--~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 145 (626)
... ..+.|.|..+.. .+.+.. .+.+++|.|.+.+.|.| +|.|++||..+.. ....|.
T Consensus 91 ~~~~~~~~~L~V~~~~~-----~P~i~~-~~~~v~L~C~~~~~p~~--~~~W~~~g~~l~~-------------~~~~i~ 149 (182)
T 1hnf_A 91 KNVLEKIFDLKIQERVS-----KPKISW-TCINTTLTCEVMNGTDP--ELNLYQDGKHLKL-------------SQRVIT 149 (182)
T ss_dssp CEEEEEEEEEEEECCCC-----CCEEEE-ETTTTEEEEECSSCSSC--EEEEEESSCEEEE-------------ESSCEE
T ss_pred ceeEEEEEEEEEcCcCC-----CCEEEE-ccCcEEEEeEccCCCCC--EEEEEECCEECCC-------------CCcEEE
Confidence 754 346777765321 111222 34579999999998854 6799999988821 122344
Q ss_pred EeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 146 ITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 146 i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
+.. ...|+|.|+|.|.|..|..+....+.
T Consensus 150 ~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 150 HKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred Eec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 433 57899999999999999887776653
No 181
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.86 E-value=9.8e-21 Score=178.16 Aligned_cols=238 Identities=13% Similarity=0.127 Sum_probs=137.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC----CcEEEccCCCCCCEEEEEEEEcCCCC-ceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN----GNLLISPVSRDDSGIYSCTATNVHGM-DESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~----g~L~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~ 76 (626)
+.+|++++|.|.+.|. |.|+|++..+. .+.....+ ++|.|.+++.+|+|.|+|.|.|..|. ....+.+.
T Consensus 12 v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~ 85 (289)
T 3mjg_X 12 LNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLY 85 (289)
T ss_dssp CCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEE
T ss_pred EeCCCcEEEEEeccce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEE
Confidence 5789999999999985 99999999883 34444443 36999999999999999999999887 22334444
Q ss_pred EEeC-Cce--eeeCCCc--eEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCC
Q psy12061 77 VLHG-PSY--YEQLPPK--ITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASF 151 (626)
Q Consensus 77 v~~~-p~~--~~~~~~~--~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 151 (626)
|... |.. +...+.. ..+.+|++++|.|.+. .|.|.+++.|.+++..+... .. ....+. ..
T Consensus 86 v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~---------~~-~~~~~~----~~ 150 (289)
T 3mjg_X 86 IFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP---------YD-HQRGFS----GI 150 (289)
T ss_dssp EECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC---------EE-TTTEEE----EC
T ss_pred EEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee---------ec-CCcCee----ee
Confidence 4332 222 2111121 7789999999999999 66666655555555554311 11 111111 25
Q ss_pred CCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCCCceEE-----EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCc
Q psy12061 152 ADAGEYECVVKSTVGKI-STKTTVIVEGPPGLPGGVQV-----VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225 (626)
Q Consensus 152 ~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p~~~~~-----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w 225 (626)
.|+|.|+|.|.|..+.. +....|.+..+ .+| .+.. .......+.|.|.... .+... +.|...+...
T Consensus 151 ~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-~~p-~i~~~~~~~~v~~G~~v~L~C~~~g---~p~p~--v~W~~~~~~~- 222 (289)
T 3mjg_X 151 FEDRSYICKTTIGDREVDSDAYYVYRLQV-SSI-NVSVNAVQTVVRQGENITLMCIVIG---NEVVN--FEWTYPRKES- 222 (289)
T ss_dssp CCSSEEEEEEEETTEEEECCCEEEEECCC-CCC-CCEEEESCSEEETTSCEEEEEEEES---CSSBE--EEEECTTSSS-
T ss_pred ccCcEEEEEEEeCCceeeeeeEEEEecCC-CCC-CcEEeCCcceeEcCCCEEEEEEECC---CCCcc--eEEEcCCccC-
Confidence 79999999999877654 33456666653 121 1111 1223455566665321 12111 2222111100
Q ss_pred eEeecceeeeeee----ccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 226 FNVSEHVIGKEVD----RYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 226 ~~~~~~~~~~~~~----~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
.......... .......+.|.+ +...+.+.|+|.|.|..|...
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~ 269 (289)
T 3mjg_X 223 ---GRLVEPVTDFLLDMPYHIRSILHIPS-AELEDSGTYTCNVTESVNDHQ 269 (289)
T ss_dssp ---SCCCCCEEEESCTTTTEEEEEEEESS-CCSSCCEEEEEEEEETTTTEE
T ss_pred ---CCcccccccccCCcceEEEEEEEEcc-cChhhCcEEEEEeecCCCCce
Confidence 0000000000 001223455555 899999999999999998553
No 182
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.86 E-value=2.4e-21 Score=194.30 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=120.4
Q ss_pred CCceEEEEeeeCC-CCCC-eeEEEeCCEEccCCCc--EEEc--c------CCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 4 EGGNVTIFCNPEA-APKP-KFVWKKDGNIIGSGGR--RKIF--E------NGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 4 ~G~~~~l~C~~~g-~p~p-~i~W~~~~~~i~~~~~--~~~~--~------~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+|+.++|.|.+.| .|.| +|.|+|||.++..+.. ..+. . .+.|.|.+++.+|+|.|+|.|.|..+....
T Consensus 130 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 209 (438)
T 1qgc_4 130 TSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI 209 (438)
T ss_dssp HTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE
T ss_pred cCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce
Confidence 5889999999988 6777 9999999999865411 1111 1 236999999999999999999998887533
Q ss_pred eEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEEecccc----------CCccCCCeeEe
Q psy12061 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGNMD----------LNELETPNINI 139 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~~~~----------~~~~~~~~~~~ 139 (626)
...+.+..++..+. +|....+.+|++++|.|.+.+.|.+...+.|+|+ |..+.... .......++..
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 288 (438)
T 1qgc_4 210 VKSFNRNECEVMLV-ESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTI 288 (438)
T ss_dssp EEEEETTC-CCEEE-EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEE
T ss_pred ecccccccceeEEe-cCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEE
Confidence 33332212223333 3567889999999999999998854456799987 55442100 00001133332
Q ss_pred c------CCeEEEeecCCCCCEeEEEEEEeCCC-----ceEEEEEEEEeC
Q psy12061 140 D------GGLLEITNASFADAGEYECVVKSTVG-----KISTKTTVIVEG 178 (626)
Q Consensus 140 ~------~~~l~i~~~~~~d~g~Y~C~a~n~~g-----~~~~~~~l~v~~ 178 (626)
. ...|.|.+++.+|+|.|+|.|.|..+ .....+.|.|..
T Consensus 289 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~ 338 (438)
T 1qgc_4 289 SRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA 338 (438)
T ss_dssp EEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS
T ss_pred EeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec
Confidence 2 23899999999999999999999554 333456777774
No 183
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.86 E-value=1.3e-21 Score=188.22 Aligned_cols=169 Identities=15% Similarity=0.200 Sum_probs=135.5
Q ss_pred CCC---ceEEEEee-eCCCCCCeeEEEeCC--EEcc-----CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 3 GEG---GNVTIFCN-PEAAPKPKFVWKKDG--NIIG-----SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 3 ~~G---~~~~l~C~-~~g~p~p~i~W~~~~--~~i~-----~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
.+| +.++|.|. +.|.|.|.|.|+|++ .... .+..+.+ ...|.|..+..+|+|.|+|.|.|..|....
T Consensus 145 ~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 222 (331)
T 3u83_A 145 KKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTV--ISRYRLVPSREAHQQSLACIVNYHMDRFKE 222 (331)
T ss_dssp CTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEE--EEEEEECCCGGGTTCEEEEEEEETTEEEEE
T ss_pred cCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEE--EEEEEEEeccccCCCEEEEEEecCCCccee
Confidence 466 78999998 889999999999953 3221 1111111 134888888999999999999999998888
Q ss_pred eEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEe-ecC
Q psy12061 72 KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEIT-NAS 150 (626)
Q Consensus 72 ~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-~~~ 150 (626)
.+.|.|..+|.+...++....+..|++++|.|.+.+.|.|. .+.|++++..+... ....++.|.|. ++.
T Consensus 223 ~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-~i~W~~~~~~~~~~---------~~~~~~~L~i~~~v~ 292 (331)
T 3u83_A 223 SLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPAT-EYHWTTLNGSLPKG---------VEAQNRTLFFKGPIN 292 (331)
T ss_dssp EEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCC-EEEEEETTBSCCTT---------EEEETTEEEECSCCC
T ss_pred eEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCC-EEEEEECCCccccc---------ceecCcEEEEeCCCc
Confidence 89999988888776677777889999999999999999874 36999999887532 34467899999 999
Q ss_pred CCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 151 FADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
.+|+|.|+|.|.|..|..+..+.|.|...+...
T Consensus 293 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 325 (331)
T 3u83_A 293 YSLAGTYICEATNPIGTRSGQVEVNITEAAALE 325 (331)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEECCBC-----
T ss_pred cccCeEEEEEEEeccccceEEEEEEEeccchhh
Confidence 999999999999999999999999998877654
No 184
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.86 E-value=6.7e-21 Score=171.57 Aligned_cols=172 Identities=17% Similarity=0.252 Sum_probs=122.7
Q ss_pred CCCCceEEEEeeeCCCCC-----CeeEEEeCCEEcc---------------CCCcEEEccC------CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPK-----PKFVWKKDGNIIG---------------SGGRRKIFEN------GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~-----p~i~W~~~~~~i~---------------~~~~~~~~~~------g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.|.|. +.|.|+|++..+. ..+|..+..+ .+|.|.+++.+|+
T Consensus 13 ~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (222)
T 3sbw_C 13 VEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDA 92 (222)
T ss_dssp EETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGC
T ss_pred EEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccC
Confidence 568999999999988774 4899999764331 1256666543 2799999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC-CEEeccccCCccCC
Q psy12061 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN-GVRIGNMDLNELET 134 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~-~~~~~~~~~~~~~~ 134 (626)
|.|+|.|.| .|.....+.|.|..+|..... +....+..|++++|.|.+.+.|.| .+.|+++ +..+......
T Consensus 93 G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~-~~~~~~~~g~~v~L~C~~~g~P~p--~i~W~~~~g~~~~~~~~~---- 164 (222)
T 3sbw_C 93 GVYRCMISY-GGADYKRITVKVNAPYNKINQ-RILVVDPVTSEHELTCQAEGYPKA--EVIWTSSDHQVLSGKTTT---- 164 (222)
T ss_dssp EEEEEEEES-SSEEEEEEEEEEEBCCCCCEE-EEEEEETTTTEEEEEEEEEEBSCC--EEEEEETTCCEECCEEEE----
T ss_pred eEEEEEEEe-CCCceeEEEEEEECCCCCCCc-eeeeeecCCCcEEEEEEecCCCCC--eEEEEECCCceecCccce----
Confidence 999999999 566677788888766543321 222367899999999999998876 5699998 6665432100
Q ss_pred CeeEecCCeEEE---eecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 135 PNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 135 ~~~~~~~~~l~i---~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
......++.+.+ ..+...|.|.|+|.|.|..|.....+.|.|..+|.
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~p~ 214 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPL 214 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCCC--
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecCCcc
Confidence 000112222222 24567899999999999999999999999886653
No 185
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.86 E-value=2.1e-21 Score=174.50 Aligned_cols=172 Identities=16% Similarity=0.188 Sum_probs=127.5
Q ss_pred CCCCceEEEEeeeCCCCCC---eeEEEeCCEEccC------------------CCcEEEcc------CCcEEEccCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIGS------------------GGRRKIFE------NGNLLISPVSRDD 54 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~i~~------------------~~~~~~~~------~g~L~i~~v~~~d 54 (626)
|.+|++++|.|.+.+.|.+ .|.|+|++..+.. .+|+.+.. +++|.|.+++.+|
T Consensus 11 v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 90 (218)
T 4frw_A 11 VVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQAD 90 (218)
T ss_dssp EETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGGG
T ss_pred EEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHHH
Confidence 5789999999999998876 4899998764421 12333221 3469999999999
Q ss_pred CEEEEEEEEcCCCCcee-eEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccC
Q psy12061 55 SGIYSCTATNVHGMDES-KGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELE 133 (626)
Q Consensus 55 ~G~Y~C~a~n~~g~~~~-~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~ 133 (626)
+|.|.|.+.+..+.... ...+.+..++......+....+..|+.+.|.|.+.+.|.| .|.|++++..+........
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p--~i~W~~~~~~~~~~~~~~~- 167 (218)
T 4frw_A 91 EGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP--SVTWDTEVKGTTSSRSFKH- 167 (218)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC--EEEEEESSCCEEEEEEEEC-
T ss_pred CCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc--eEEEEECCcccccCceEec-
Confidence 99999999987766444 3455555555555555667788899999999999999987 4589999888765421100
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
.......+.|.|.++...|.|.|+|.|.|..|..+..+.+.|.
T Consensus 168 -~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 168 -SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp -SSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred -CCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 1111234579999999999999999999999988777766643
No 186
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=1.5e-21 Score=189.16 Aligned_cols=174 Identities=18% Similarity=0.219 Sum_probs=101.2
Q ss_pred CCCCceEEEEeee-----CCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCC-CCc---eee
Q psy12061 2 AGEGGNVTIFCNP-----EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMD---ESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~-----~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~-g~~---~~~ 72 (626)
+.+|+.++|.|.+ .|.|.|.|.|+|||.+|....++.. .+..|.|.+++.+|+|.|+|.|.|.. |.. ...
T Consensus 132 ~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~ 210 (349)
T 4dep_C 132 YIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIP-EGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRT 210 (349)
T ss_dssp ETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEE-ETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred eecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceee-cCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEE
Confidence 4689999999985 7889999999999999965544332 33569999999999999999999987 443 455
Q ss_pred EEEEEEeC-----CceeeeCCCc--eEEecCCcEEEEEEecc----cCCcceeEEEeeCCEEeccc-cCCccCCC-----
Q psy12061 73 GRLIVLHG-----PSYYEQLPPK--ITIAAHRNLQLRCSAHT----EELLDVAYIWTHNGVRIGNM-DLNELETP----- 135 (626)
Q Consensus 73 ~~l~v~~~-----p~~~~~~~~~--~~v~~g~~~~l~C~~~~----~p~p~~~i~W~~~~~~~~~~-~~~~~~~~----- 135 (626)
..|.|..+ |+.+..++.. ..+..|++++|.|.+.+ .|.| .+.|+++|..+... ........
T Consensus 211 ~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p--~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 288 (349)
T 4dep_C 211 LTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRN--EVWWTIDGKKPDDITIDVTINESISHSR 288 (349)
T ss_dssp EEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCC--EEEEESSCC--------CCCCEEEECCT
T ss_pred EEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCC--EEEEEECCEEccccCCccccccceeeec
Confidence 66777653 3333333433 27889999999999995 4554 66999999988752 10000000
Q ss_pred -eeEecCCeEEEeecCCCCC-EeEEEEEEeCCCceEEEEEEEEeC
Q psy12061 136 -NINIDGGLLEITNASFADA-GEYECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 136 -~~~~~~~~l~i~~~~~~d~-g~Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
........|.|.+++.+|+ |.|+|.|.|..|..+..+.|.|..
T Consensus 289 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 289 TEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp TCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred CCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 0011234599999999999 999999999999999999998865
No 187
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.85 E-value=1.5e-20 Score=169.61 Aligned_cols=168 Identities=17% Similarity=0.251 Sum_probs=115.4
Q ss_pred CCCCceEEEEeeeCCCCCC---eeEEEeCCEE-----------cc------CCCcEEEccC------CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP---KFVWKKDGNI-----------IG------SGGRRKIFEN------GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~-----------i~------~~~~~~~~~~------g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.|.+ .|.|+|++.. +. ...|...... .+|.|.+++.+|+
T Consensus 16 v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 95 (226)
T 4f80_A 16 AMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDS 95 (226)
T ss_dssp EETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGC
T ss_pred EEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHC
Confidence 5689999999999887655 7999987632 21 1234444332 3699999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEE-eccccCCccC
Q psy12061 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVR-IGNMDLNELE 133 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~-~~~~~~~~~~ 133 (626)
|.|+|.|.|..|.......+.+. +... .++....+..|+.+.|.|.+.+. |.| +|.|++++.. +....
T Consensus 96 G~Y~C~a~n~~~~~~~~v~~~~~--~~~~-~~~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k~~~~~~~~~~----- 165 (226)
T 4f80_A 96 GKYLCYFQDGDFYEKALVELKVA--ALGS-DLHVDVKGYKDGGIHLECRSTGWYPQP--QIQWSNNKGENIPTVE----- 165 (226)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE--BCCC-CCEEEEEEEETTEEEEEEEEEEEBSCC--EEEEECTTSCBCCCEE-----
T ss_pred eeEEEEEECCCcEEEEEEEEeec--ccee-cccceeeeccCCceeeEEEeccCCCCC--EEEEEECCceEcCCCc-----
Confidence 99999999987766554444443 2222 23456778899999999999985 766 5689986544 33221
Q ss_pred CCeeEecCC---eEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCC
Q psy12061 134 TPNINIDGG---LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 134 ~~~~~~~~~---~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
.......++ .+.+..++.+|+|.|+|.|.|..|..+..+.|.|.+|
T Consensus 166 ~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 166 APVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADP 214 (226)
T ss_dssp CCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTT
T ss_pred eEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCC
Confidence 011222333 2445577889999999999999999999999988764
No 188
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.85 E-value=9.9e-21 Score=175.40 Aligned_cols=150 Identities=15% Similarity=0.201 Sum_probs=123.5
Q ss_pred CCCCceEEEEeee-CCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe-
Q psy12061 2 AGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH- 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~- 79 (626)
+.+|+.++|.|.+ .+.|.+.+.|+|+|..+... ..++.|.|.+++.+|+|.|+|.|.|..+.....+.|.|..
T Consensus 94 ~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~ 168 (262)
T 3rjd_A 94 FTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKEL 168 (262)
T ss_dssp EETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECS
T ss_pred EecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccC
Confidence 4589999999999 77888999999999988422 2356799999999999999999999998777888999986
Q ss_pred -CCceeeeCCCceEEecCCcEEEEEEecccCC-cc--eeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCE
Q psy12061 80 -GPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LD--VAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAG 155 (626)
Q Consensus 80 -~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~--~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 155 (626)
+++.+...+ ...+..|++++|.|.+.+.|. |. ..+.|++++..+... .....|.|.+++.+|+|
T Consensus 169 ~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~-----------~~~~~L~i~~v~~~d~G 236 (262)
T 3rjd_A 169 FPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR-----------NTSSEYQILTARREDSG 236 (262)
T ss_dssp SCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE-----------ESCCEEEESSCCGGGCE
T ss_pred CCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc-----------CCCceEEEEEechhhCe
Confidence 244444433 567889999999999999876 44 347899999988642 24568999999999999
Q ss_pred eEEEEEEeCCCce
Q psy12061 156 EYECVVKSTVGKI 168 (626)
Q Consensus 156 ~Y~C~a~n~~g~~ 168 (626)
.|+|.|.|..|..
T Consensus 237 ~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 237 LYWCEAATEDGNV 249 (262)
T ss_dssp EEEEEEEETTSSC
T ss_pred EEEEEEEcccCce
Confidence 9999999999975
No 189
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.85 E-value=3.6e-21 Score=169.50 Aligned_cols=157 Identities=19% Similarity=0.326 Sum_probs=112.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEe--
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLH-- 79 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~-- 79 (626)
+.+|++++|.|.+ |.|.|.|+|||..|... ...+++|.|.+++.+|+|.|+|.+.+.. .....|.|..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~---s~~~~v~v~~~~ 84 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL----TEDKKKWNLGSNAKDPRGMYQCKGSQNK---SKPLQVYYRMGS 84 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE----ESSCCCEEEEEGGGCCEEEEEEESSSSC---CCCEEEEEEC--
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC----CCCCCeEEeCCCCcCCCEEEEEEecCCC---CeeEEEEEEEec
Confidence 4689999999999 78899999999988532 1245689999999999999999975532 2224455540
Q ss_pred ----------------------------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 80 ----------------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 80 ----------------------------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
.+..+...|. ....+|++++|.|. +.|.|. +.|+|||..+....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~--g~p~p~--i~W~k~~~~l~~~~--- 156 (204)
T 1sy6_A 85 ADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KVSISGTTVILTCP--QYPGSE--ILWQHNDKNIGGDE--- 156 (204)
T ss_dssp ----------------------------------CCCC-EEEEETTEEEEECS--CCCSSC--EEEEETTEEESCCT---
T ss_pred cccccccccccccccccccccccccccccccceecCCc-eeeecCCcEEEEcC--CCCCCc--eEEEECCEECCCcc---
Confidence 0222222222 22338999999998 667664 58999999986431
Q ss_pred cCCCeeEecCCeEEEeec-CCCCCEeEEEEEEeCCCce-EEEEEEEEe
Q psy12061 132 LETPNINIDGGLLEITNA-SFADAGEYECVVKSTVGKI-STKTTVIVE 177 (626)
Q Consensus 132 ~~~~~~~~~~~~l~i~~~-~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~ 177 (626)
....+...++.|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.+.
T Consensus 157 -~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 157 -DDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp -TCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEEC
T ss_pred -CCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEEe
Confidence 01223335889999999 9999999999999999963 556666543
No 190
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.85 E-value=2.8e-21 Score=173.98 Aligned_cols=173 Identities=19% Similarity=0.345 Sum_probs=123.0
Q ss_pred CCCCCceEEEEeeeCCCCC-----CeeEEEeCCEEc-------------cCCCcEEEcc------CCcEEEccCCCCCCE
Q psy12061 1 YAGEGGNVTIFCNPEAAPK-----PKFVWKKDGNII-------------GSGGRRKIFE------NGNLLISPVSRDDSG 56 (626)
Q Consensus 1 ~~~~G~~~~l~C~~~g~p~-----p~i~W~~~~~~i-------------~~~~~~~~~~------~g~L~i~~v~~~d~G 56 (626)
.|.+|++++|.|.+.+.|. +.|.|+|++... ...+|..+.. +++|.|.+++.+|+|
T Consensus 6 ~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G 85 (222)
T 4i0k_A 6 VALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEG 85 (222)
T ss_dssp CCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCS
T ss_pred EEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCE
Confidence 3789999999999998864 699999987433 1245666654 567999999999999
Q ss_pred EEEEEEEcCCCCceeeEEEEEEeCC--ceeeeCCCceEEecCCcEEEEEEe-cccCCcceeEEEee-CCEEeccccCCcc
Q psy12061 57 IYSCTATNVHGMDESKGRLIVLHGP--SYYEQLPPKITIAAHRNLQLRCSA-HTEELLDVAYIWTH-NGVRIGNMDLNEL 132 (626)
Q Consensus 57 ~Y~C~a~n~~g~~~~~~~l~v~~~p--~~~~~~~~~~~v~~g~~~~l~C~~-~~~p~p~~~i~W~~-~~~~~~~~~~~~~ 132 (626)
.|+|.+.|. +.....+.|.|..++ +.+.. .....+..|++++|.|.+ .+.|.| .+.|++ ++..+.....
T Consensus 86 ~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~-~~~~~v~~G~~~~l~C~~~~g~P~~--~v~W~~~~~~~~~~~~~--- 158 (222)
T 4i0k_A 86 SYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTL-EPNKDLRPGNMVTITCSSYQGYPEA--EVFWKDGQGVPLTGNVT--- 158 (222)
T ss_dssp CEEEEEEEC-CCCCCCCCCCCCBCCCCCEEEC-CC-----CCSEEEEEEEEEEEBSCC--EEEEECTTSCBCCSEEE---
T ss_pred EEEEEEEeC-CCceEEEEEEEEcCCCCCcEEe-CCCceecCCceEEEEEecccccCCC--eEEEEcCCCccCCCCcc---
Confidence 999999986 444556677776542 22222 234467899999999999 777776 568999 5555543210
Q ss_pred CCCeeEecCC---eEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 133 ETPNINIDGG---LLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 133 ~~~~~~~~~~---~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
........+ .|.|.+++.+|+|.|+|.|.|..|.....+.|.|.++|.
T Consensus 159 -~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 159 -TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp -EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred -eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 011111222 388999999999999999999999999999999998774
No 191
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.85 E-value=9.2e-20 Score=161.86 Aligned_cols=199 Identities=16% Similarity=0.134 Sum_probs=148.1
Q ss_pred CCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEE
Q psy12061 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVK 365 (626)
Q Consensus 286 ~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~ 365 (626)
.|+.+|.++........++.++|++. .+.+. ...|.|+|+..+...|..+............+.+.+|.+.+.|.|+
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~--~~~~~-~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~ 78 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPG--TDGGL-PTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMM 78 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECC--SSSCC-CSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCC--CCCCC-CceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEE
Confidence 35688999999988899999999983 34433 4689999998775666654321111223455556679999999999
Q ss_pred EEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeee----cceEEEEeeeccccccccce-eeEEEEEEEEecCCCcc
Q psy12061 366 VQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN----STAINVTWNPIELIRENIRG-RLIGHRIKYWKEDNPEE 440 (626)
Q Consensus 366 v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~----~~si~l~W~~~~~~~~~~~~-~i~~Y~v~~~~~~~~~~ 440 (626)
|.|.|..|.+. +....+.+...+++.+|.++.+.... .+++.|+|++|...... +| .+.+|.|+|+..+...+
T Consensus 79 V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~-~g~~~~~Y~v~y~~~~~~~~ 156 (210)
T 3n06_B 79 VNATNQMGSSF-SDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLK-TGWFTLLYEIRLKPEKAAEW 156 (210)
T ss_dssp EEEEETTEEEE-CCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCT-TSSCCEEEEEEEECTTCSSC
T ss_pred EEEEcCCCCee-CCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCcccc-CCeEEEEEEEEEecCCCCCC
Confidence 99999999874 55566666665666699999888654 57999999998754311 13 36899999988766444
Q ss_pred ceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCC-CCCCccEEEeecCCC
Q psy12061 441 TAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGE-GPESERYLERTYRKA 492 (626)
Q Consensus 441 ~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~-s~~s~~~~~~t~~~~ 492 (626)
... .......+.+.+|+|++.|.|+|+|.+..|. |++|..+.++|.++.
T Consensus 157 ~~~---~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~~ 206 (210)
T 3n06_B 157 EIH---FAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSDF 206 (210)
T ss_dssp EEE---EEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCTTC
T ss_pred EEE---eccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcCCC
Confidence 321 2234456999999999999999999999887 899999999987653
No 192
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=4.9e-21 Score=172.98 Aligned_cols=169 Identities=14% Similarity=0.187 Sum_probs=121.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC--ceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM--DESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~--~~~~~~l~v 77 (626)
|.+|++|+|.|.+.+ +.+.+.|+|+|..+... .......+++|.|.+++.+|+|.|+|.+.|..+. .+....|.|
T Consensus 18 v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V 96 (242)
T 1p6f_A 18 VPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVV 96 (242)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEE
T ss_pred cCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEe
Confidence 568999999999976 45699999999876421 1111123457999999999999999999886543 244577888
Q ss_pred Ee---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCC
Q psy12061 78 LH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADA 154 (626)
Q Consensus 78 ~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 154 (626)
.. .|.+... | ...+.+|++++|.|.+.+.+. .+.|+|+|..+... .........|.|.+++.+|+
T Consensus 97 ~~~~~~P~i~~~-p-~~~v~~G~~vtL~C~~~~~~~---~~~w~k~g~~~~~~-------~~~~~~~~~l~I~~v~~~d~ 164 (242)
T 1p6f_A 97 TEMYDTPTLSVH-P-GPEVISGEKVTFYCRLDTATS---MFLLLKEGRSSHVQ-------RGYGKVQAEFPLGPVTTAHR 164 (242)
T ss_dssp ECCSCCCEEEEE-S-CSEEETTCEEEEEEECTTSCS---EEEEEECSSSCEEE-------EEECSSEEEEEEEECCGGGC
T ss_pred ecccCCCceEcc-C-CCccCCCCcEEEEEecCCCCC---EEEEEECCCccCcc-------ccCCCceEEEEeCCCccccC
Confidence 64 4444433 3 356899999999999886542 67999999766431 11122456899999999999
Q ss_pred EeEEEEEEeCC---CceEEEEEEEEeCCCCCC
Q psy12061 155 GEYECVVKSTV---GKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 155 g~Y~C~a~n~~---g~~~~~~~l~v~~~P~~p 183 (626)
|.|+|.+.|.. ...+..+.|.|.+++..|
T Consensus 165 G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P 196 (242)
T 1p6f_A 165 GTYRCFGSYNNHAWSFPSEPVKLLVTGDIENT 196 (242)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEEEEC-----
T ss_pred EEEEEEEECCCCcccCCCCCEEEEEeccCCCC
Confidence 99999999864 245677889998876655
No 193
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.85 E-value=6.7e-19 Score=171.87 Aligned_cols=412 Identities=15% Similarity=0.104 Sum_probs=236.5
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEE-eCCCceEEEEEEEEe---CCCCCCCceEEEEEec-cceEEEEecCCCC--CC
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVK-STVGKISTKTTVIVE---GPPGLPGGVQVVEVHK-TSATIQWTDGATN--GR 208 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~-n~~g~~~~~~~l~v~---~~P~~p~~~~~~~~~~-~~~~l~W~~~~~~--~~ 208 (626)
-.+..+....|..+...| .+.|+-. ...|.......|..+ ..|.+|..+.+..... ..+.|+|...... ..
T Consensus 39 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~ 116 (483)
T 3e0g_A 39 CYQLEKTSIKIPALSHGD--YEITINSLHDFGSSTSKFTLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHR 116 (483)
T ss_dssp EEEESSSBCCEECCSSSC--CCEEEECSSCC----CCCEECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSC
T ss_pred chhhhccceEeecCCccc--eEEEEcccCCCCCCceeEEEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcc
Confidence 344466788889888888 5566543 334444444444433 4688888888876655 8899999854221 11
Q ss_pred cccEEEEEEeecCCCC--ceEeecceeeeeeeccCCceeEEEEeec-cCCceEEEEEEEe-cC---CccCCCCCCCCccc
Q psy12061 209 PITHYKIIARTNWNST--WFNVSEHVIGKEVDRYTGRKEASIENVL-VPWSTYEFKVIAG-NE---LGYGEPSSPSPQYN 281 (626)
Q Consensus 209 ~~~~y~v~~~~~~~~~--w~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~~~y~~~v~a~-n~---~g~~~~s~~~~~~~ 281 (626)
.-..|.|+..+....+ |...-.. . ...-.+.....-..+| .+.+.+.+|+++. |. .|.+.+|..+....
T Consensus 117 ~~~~~~i~i~r~~~~~~v~~~~~~~-~---~~~~~~~~~w~w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~ 192 (483)
T 3e0g_A 117 SNVIWEIKVLRKESMELVKLVTHQT-T---LNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQ 192 (483)
T ss_dssp CEEEEEEEEESSSSCEEEEEEEEEE-C---GGGCCEEEEEEEECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEE
T ss_pred cceEEEEEEEEcCCccEEEEEEEEE-E---ecCCCceEEEEecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhh
Confidence 2446888777654432 2221110 0 0000112234444434 5678899999988 33 44333343331111
Q ss_pred C---CCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcc
Q psy12061 282 T---PADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFY 358 (626)
Q Consensus 282 ~---~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p 358 (626)
. ....+-.-|.+..+..+ ..+++.... ... . ... ..+........ -+.....+++.+|..
T Consensus 193 ~~~~~~~~~~ifP~~~vv~~G--S~vt~~Ci~--~~~----~----~~~-~l~~~~~~~~~----l~~~~~~i~v~nl~~ 255 (483)
T 3e0g_A 193 ISWIPDSQTKVFPQDKVILVG--SDITFCCVS--QEK----V----LSA-LIGHTNCPLIH----LDGENVAIKIRNISV 255 (483)
T ss_dssp ECCCCCSSCCEESCSEEEETT--CCEEEEECC--SSC----E----EEE-ESSSCCBCCEE----CSSSCEEEEECSCCC
T ss_pred ccccCCCCcEEeccCCEEeCC--CCEEEEEEe--Ccc----c----cce-ecCcccceeEE----ecCCEEEEEEeCCCC
Confidence 1 11111233444444433 456666654 111 0 111 11111111111 122344566666643
Q ss_pred ----eeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecccccccccee-eEEEEEEEE
Q psy12061 359 ----YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR-LIGHRIKYW 433 (626)
Q Consensus 359 ----~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~-i~~Y~v~~~ 433 (626)
++.|.+.. . + ......+. ...|+.+|.++.+...+..++.++|+++.+.+. +|. ...|.|.|+
T Consensus 256 ~~~sg~n~~C~~----~-~-~~~g~~l~----vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l--~G~~~t~YtL~y~ 323 (483)
T 3e0g_A 256 SASSGTNVVFTT----E-D-NIFGTVIF----AGYPPDTPQQLNCETHDLKEIICSWNPGRVTAL--VGPRATSYTLVES 323 (483)
T ss_dssp CCSSCEEEEEEE----S-S-CEEEEEEE----EECCCCCCEEEEEEBSSTTEEEEEEECCSCCSC--CGGGCCEEEEEET
T ss_pred ccCccceEEEec----C-C-cccceEEE----CcCCCCCCCccEEEecCCCEEEEEECCCCcCCc--CCCCCeeEEEEEE
Confidence 45554432 1 1 11111122 224556899999998888899999999875421 122 678999986
Q ss_pred ecCCCccceEEEEe---cCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEE
Q psy12061 434 KEDNPEETAVYYLS---RTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTV 510 (626)
Q Consensus 434 ~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~ 510 (626)
..+.. ...... ........+.+|.+.+.|.|+|.|.|..|.+. +. ..+.....+++.||.++++...+.+.+
T Consensus 324 ~~g~~---~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl 398 (483)
T 3e0g_A 324 FSGKY---VRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGRSQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAV 398 (483)
T ss_dssp TTCCE---EEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCEEE-EE-EEECGGGGBCCCCCEEEEECCSSSSSC
T ss_pred ECCCC---ccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCCcc-cc-eEEEeccccCCCCCeeeEEEEecCCeE
Confidence 43221 111000 12344678999999999999999999998765 33 456555666777999999988888999
Q ss_pred EEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeec---CccceEEecCCCCCceEEEEEEEEecCCC---CCCCC
Q psy12061 511 HVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPV---GNTLDADIVDLSPGKRYHMRVLAFSNGGD---GRMSS 584 (626)
Q Consensus 511 ~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~---g~~s~ 584 (626)
.|+|+ +|...++.+..|+|+|+..+.... ....... .....+.+.+|.|++.|.|+|+|. ..|. |++|+
T Consensus 399 ~LsW~--~P~~~~~~~L~YeVrYr~~~~~~~--~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~ 473 (483)
T 3e0g_A 399 KLSWH--LPGNFAKINFLCEIEIKKSNSVQE--QRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSN 473 (483)
T ss_dssp CEEEE--CCSCCTTSBCCCEEEEECSSSCCC--EEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCC
T ss_pred EEEEC--CCCCCCCceEEEEEEEEECCCCCc--eEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCC
Confidence 99999 455566778899999987654321 1111111 234468899999999999999999 7777 56665
Q ss_pred CcEEEeecc
Q psy12061 585 PAITFQMGE 593 (626)
Q Consensus 585 ~~~~~~~~~ 593 (626)
+ ..|+|.+
T Consensus 474 ~-~~f~T~E 481 (483)
T 3e0g_A 474 K-KQHLTTE 481 (483)
T ss_dssp C-CCCCCCC
T ss_pred c-eeeECCC
Confidence 4 3465543
No 194
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.85 E-value=2.4e-20 Score=187.01 Aligned_cols=170 Identities=15% Similarity=0.250 Sum_probs=119.2
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEEcc-----------------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~i~-----------------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.|.+ .+.|.|+|+ +..+. ..+|+.+..+ ++|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (444)
T 1igt_B 12 VQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDT 91 (444)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHHC
Confidence 57899999999998875 579999985 33210 2357777643 3799999999999
Q ss_pred EEEEEEEEcCCCC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccc
Q psy12061 56 GIYSCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNM 127 (626)
Q Consensus 56 G~Y~C~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~ 127 (626)
|.|+|.|.|..+. ....+.|.|.. +|.+...+|.. .+.+|+.++|.|.+.+. |.| +.+.|++++..+...
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~~~ 169 (444)
T 1igt_B 92 AMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVC-GDTTGSSVTLGCLVKGYFPEP-VTLTWNSGSLSSGVH 169 (444)
T ss_dssp EEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCS-SCCCSSCEEEEEEEEEEBSSC-CEEEEGGGTBCTTEE
T ss_pred EEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccc-cCCCCCcEEEEEEEcceeCCC-cEEEEecCCCCCCeE
Confidence 9999999998665 22346788763 45554433333 34799999999999986 544 477999998764211
Q ss_pred cCCc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 128 DLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 128 ~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
.... .....+. ..+.|.|.++..+| |.|+|.|.|..|.......+.
T Consensus 170 ~~~~~~~~~~~~-~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~ 216 (444)
T 1igt_B 170 TFPAVLQSDLYT-LSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIE 216 (444)
T ss_dssp ECCCEEETTEEE-EEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECC
T ss_pred ecCccccCCcEE-EEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEec
Confidence 1000 0011121 23579999999899 999999999999865555543
No 195
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.85 E-value=1.6e-21 Score=177.00 Aligned_cols=170 Identities=15% Similarity=0.223 Sum_probs=124.8
Q ss_pred CCCCceEEEEeeeCCCCC-CeeEEEeCCEEcc-------------CCCcEE----------EccCCcEEEccCCCCCCEE
Q psy12061 2 AGEGGNVTIFCNPEAAPK-PKFVWKKDGNIIG-------------SGGRRK----------IFENGNLLISPVSRDDSGI 57 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~-p~i~W~~~~~~i~-------------~~~~~~----------~~~~g~L~i~~v~~~d~G~ 57 (626)
+.+|++++|.|.+.+.|. +.|.|+|++.... -..|+. +..++.|.|.+++.+|+|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 91 (231)
T 2pet_A 12 VMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVGDERD 91 (231)
T ss_dssp EETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGGGCEE
T ss_pred EEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcccCce
Confidence 568999999999999985 8999998544311 123444 6667889999999999999
Q ss_pred EEEEEEcCC-CCceeeEEEEEEeCCce--eeeCCCceEEecCCcE-EEEEEe-cccCCcceeEEEeeCCEEeccccCCcc
Q psy12061 58 YSCTATNVH-GMDESKGRLIVLHGPSY--YEQLPPKITIAAHRNL-QLRCSA-HTEELLDVAYIWTHNGVRIGNMDLNEL 132 (626)
Q Consensus 58 Y~C~a~n~~-g~~~~~~~l~v~~~p~~--~~~~~~~~~v~~g~~~-~l~C~~-~~~p~p~~~i~W~~~~~~~~~~~~~~~ 132 (626)
|+|.|.|.. +.....+.|.|..+|.. +...+....+..|+++ +|.|.+ .+.|.| .+.|+++|..+......
T Consensus 92 Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p--~i~W~~~~~~~~~~~~~-- 167 (231)
T 2pet_A 92 YVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAP--KITWYRNGQRLEVPVEM-- 167 (231)
T ss_dssp EEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCC--EEEEEETTEECCCCSSC--
T ss_pred EEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCC--EEEEEECCccCcccccc--
Confidence 999999987 77777889999887643 3344566777899988 999999 888877 56899999998754310
Q ss_pred CCCeeEec-------------CCeEEEeecCCCCCEeEEEEEEeC-----CCc-eEEEEEEEE
Q psy12061 133 ETPNINID-------------GGLLEITNASFADAGEYECVVKST-----VGK-ISTKTTVIV 176 (626)
Q Consensus 133 ~~~~~~~~-------------~~~l~i~~~~~~d~g~Y~C~a~n~-----~g~-~~~~~~l~v 176 (626)
..+..+. .+.|.|......|.|.|+|.|.|. .|. .+..+.|.|
T Consensus 168 -~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 168 -NPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp -CSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred -ccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 0111111 156888755555699999999994 444 444444443
No 196
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.85 E-value=5.2e-21 Score=184.52 Aligned_cols=168 Identities=16% Similarity=0.276 Sum_probs=118.3
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEEc-----------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII-----------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~i-----------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.|.+ .+.|.|+|+ |..+ ...+|+.+..+ ++|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (344)
T 1za6_B 12 VKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSEDT 91 (344)
T ss_dssp ECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcccC
Confidence 57899999999998873 679999996 3322 12467777643 3799999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 56 GIYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
|.|+|.|.|..+.....+.|.|.. +|.+...++ ...+..|++++|.|.+.+.++..+.|.|+|+|..+.......
T Consensus 92 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 170 (344)
T 1za6_B 92 AVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPA 170 (344)
T ss_dssp EEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECC-SCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCC
T ss_pred EEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccc-cccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCC
Confidence 999999999665555667888873 344443333 334679999999999998743224679999997643211100
Q ss_pred --cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 132 --LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 132 --~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
....++. ..+.|.|.+++..| |.|+|.|.|..|......
T Consensus 171 ~~~~~~~~~-~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~ 211 (344)
T 1za6_B 171 VLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 211 (344)
T ss_dssp EECTTSCEE-EEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEE
T ss_pred eECCCCCEE-EEEEEEEcHHHcCC-CcEEEEEEeCCCCccceE
Confidence 0112221 22479999988878 999999999988754333
No 197
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.85 E-value=1.2e-19 Score=161.04 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=139.1
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEE--eCCccCceEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI--VGLQPDTKYY 466 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i--~~L~p~t~Y~ 466 (626)
.|+.+|.++++...+..++.++|+++.+.+ ....|.|+|+......+...............+ .+|.+++.|.
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~-----~~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~ 76 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGG-----LPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYI 76 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSC-----CCSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCC-----CCceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEE
Confidence 355689999999889999999999877432 246899999876533221110001112233444 5799999999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeC----CCEEEEEEeecCCCCC-CC-ceeeEEEEEEEeccCC
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN----PTTVHVTWRYVSPSFE-EE-PIIGYKVRVWEVDQDM 540 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~----~~~~~l~W~~~~~~~~-~~-~i~~Y~i~~~~~~~~~ 540 (626)
|+|.|.|..|.+. +..+.+.+...+++.||.++.+...+ .+++.|+|++|..... +| .+.+|+|+|+..+...
T Consensus 77 ~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~ 155 (210)
T 3n06_B 77 MMVNATNQMGSSF-SDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAE 155 (210)
T ss_dssp EEEEEEETTEEEE-CCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSS
T ss_pred EEEEEEcCCCCee-CCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCC
Confidence 9999999998873 44566777766777899999888664 5899999995433221 24 4689999998765432
Q ss_pred ccccceeeecCccceEEecCCCCCceEEEEEEEEecCCC-CCCCCCcEEEeecc
Q psy12061 541 SRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGD-GRMSSPAITFQMGE 593 (626)
Q Consensus 541 ~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~-g~~s~~~~~~~~~~ 593 (626)
. ........+.+.|.+|.|++.|.|+|+|.+..|. |++|.+ +.|+|.+
T Consensus 156 ~----~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~-~~~~Tp~ 204 (210)
T 3n06_B 156 W----EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPA-TFIQIPS 204 (210)
T ss_dssp C----EEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCC-EEEECCT
T ss_pred C----EEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCc-eeEECcC
Confidence 1 2223345678999999999999999999999997 999965 4577653
No 198
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.85 E-value=3.5e-19 Score=156.98 Aligned_cols=174 Identities=17% Similarity=0.252 Sum_probs=133.8
Q ss_pred CCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEe
Q psy12061 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAI 369 (626)
Q Consensus 290 ~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~ 369 (626)
+|.++.+...+.+++.|+|+++. ++.+.+|.|+|+..+...+...... ......+.+.+|.|++.|.|+|+|.
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~----~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~i~~L~p~t~Y~~~V~a~ 97 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLN----SSTIIGYRITVVAAGEGIPIFEDFV---DSSVGYYTVTGLEPGIDYDISVYTV 97 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCS----SSSCCEEEEEEEESSSSSCCEEEEE---ETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCC----CCCccEEEEEEEECCCCCCceeEEc---CCCccEEEeCCCCCCCEEEEEEEEE
Confidence 68899999999999999999832 3578999999998774433222111 1234567899999999999999999
Q ss_pred cCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecC
Q psy12061 370 NDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRT 449 (626)
Q Consensus 370 n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~ 449 (626)
|..|.+.+ ..+.+....| +|.++++...+.+++.|+|++|.. +.+.+|.|+|+........ .......
T Consensus 98 ~~~g~s~~---~~~~t~~~~p--~P~~l~~~~~~~~sv~l~W~~p~~------~~i~~Y~v~~~~~~~~~~~-~~~~~~~ 165 (203)
T 2gee_A 98 KNGGESTP---TTLTQQTAVP--PPTDLRFTNIGPDTMRVTWAPPPS------IDLTNFLVRYSPVKNEEDV-AELSISP 165 (203)
T ss_dssp SSSCBCCC---EEEEEECCCC--CCEEEEEEEEETTEEEEEEECCSS------CCCSEEEEEEEETTCGGGC-EEEEECT
T ss_pred eCCCcccc---EeeeecCCCc--CCCceEEEEcCCCEEEEEEcCCCC------CCccEEEEEEEECCCCCcc-EEEEcCC
Confidence 98887554 3444545444 788999999999999999999852 4688999999876554322 2233455
Q ss_pred ccceEEEeCCccCceEEEEEEEeeCCCCCCCCc
Q psy12061 450 TRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482 (626)
Q Consensus 450 ~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~ 482 (626)
....+.+.+|+|++.|.|+|+|.|..|.|++..
T Consensus 166 ~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~ 198 (203)
T 2gee_A 166 SDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLR 198 (203)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred CcCEEEECCCCCCCEEEEEEEEecCCCcCCCee
Confidence 667799999999999999999999999887653
No 199
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.84 E-value=2.1e-21 Score=193.96 Aligned_cols=170 Identities=15% Similarity=0.247 Sum_probs=120.4
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc----c-------------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII----G-------------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i----~-------------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.|.+ .+.|.|+|++ ..+ . ..+|+.+..+ .+|.|.+++.+|+
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 90 (434)
T 1igy_B 11 ARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSDDS 90 (434)
T ss_dssp ECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGGGC
T ss_pred ecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChHHC
Confidence 57899999999999874 6799999963 221 0 1357777653 3799999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccCC
Q psy12061 56 GIYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLN 130 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~ 130 (626)
|.|+|.|.|..+.....+.|.|.. +|.+...++. ..+.+|+.++|.|.+.+. |.| +.+.|+|++..+......
T Consensus 91 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~G~~v~L~C~~~g~~P~p-~~v~W~k~~~~~~~~~~~ 168 (434)
T 1igy_B 91 AVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGVHTFP 168 (434)
T ss_dssp SEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCC-CCCCCTTEEEEEEEEEEEBSSC-CEEEETTTTBCSSEEECC
T ss_pred EEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCc-cccCCCCcEEEEEEEeeecCCC-eEEEEeeCCcCCCeEecC
Confidence 999999999765555667888863 4545443333 335799999999999987 543 477999998764211100
Q ss_pred cc-CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 131 EL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 131 ~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
.. ....+. ..+.|.|.+++.+| |.|+|.|.|..|.......+.
T Consensus 169 ~~~~~~~~~-~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~ 212 (434)
T 1igy_B 169 AVLQSDLYT-LSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIV 212 (434)
T ss_dssp CEECSSCEE-EEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECC
T ss_pred ceecCCcEE-EEEEEEEcchhcCC-CcEEEEEEeCCCCccceeecc
Confidence 00 011111 23579999999889 999999999999865555443
No 200
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.84 E-value=2.3e-20 Score=173.58 Aligned_cols=181 Identities=17% Similarity=0.205 Sum_probs=122.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCE-----Ec---------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGN-----II---------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~-----~i---------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++|+|.|.+.+.|.+.|.|+|++. .+ ...+|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 24 v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n 103 (276)
T 3auv_A 24 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHY 103 (276)
T ss_dssp CCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEEec
Confidence 6799999999999999999999998541 12 124577665444 799999999999999999999
Q ss_pred CCCC-ceeeEEEEEEeCC-------------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCC--EEec---
Q psy12061 65 VHGM-DESKGRLIVLHGP-------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIG--- 125 (626)
Q Consensus 65 ~~g~-~~~~~~l~v~~~p-------------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~--~~~~--- 125 (626)
..+. ....+.|.|..+| .+....|....+.+|++++|.|.+.+.+.+...+.|+|++ ....
T Consensus 104 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~ 183 (276)
T 3auv_A 104 TTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVA 183 (276)
T ss_dssp SSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEE
T ss_pred CCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEE
Confidence 8665 3344678776653 2333335678999999999999999877434577999963 2210
Q ss_pred ---cc----cCCccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeCC---Cc--eEEEEEEEEeCCCCC
Q psy12061 126 ---NM----DLNELETPNINID------GGLLEITNASFADAGEYECVVKSTV---GK--ISTKTTVIVEGPPGL 182 (626)
Q Consensus 126 ---~~----~~~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~~---g~--~~~~~~l~v~~~P~~ 182 (626)
.. ........++... ...|.|.+++.+|+|.|+|.|.|.. +. ......|.|...|..
T Consensus 184 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~~~ 258 (276)
T 3auv_A 184 GITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASAA 258 (276)
T ss_dssp EECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC-----
T ss_pred EEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEcccccc
Confidence 00 0000112344432 2389999999999999999999983 22 234567777655544
No 201
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.84 E-value=8.1e-20 Score=161.14 Aligned_cols=176 Identities=18% Similarity=0.212 Sum_probs=130.7
Q ss_pred CCceeEeecCC--cCeEEEEEeeCCCCCcccCcceEEEEEEecC-CCcceeeeeeeecceeeEEEEeCCCcceeEEEEEE
Q psy12061 290 APSRIGGGGGK--IGDLSISWEPLPREKQNAPNIYYKIFWRKKN-DTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 290 ~p~~~~~~~~~--~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
+|.++.+...+ .+++.|+|+++ .++.+.+|.|+|+..+ ...|...... .....+.+.+|.|++.|.|+|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p----~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~i~~L~p~t~Y~~~V 73 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP----QPSHISKYILRWRPKNSVGRWKEATIP----GHLNSYTIKGLKPGVVYEGQL 73 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC----SSTTCCEEEEEEEETTCSSCCEEEEEC----TTCCEEEECSCCTTEEEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCC----CCCCceEEEEEEEECCCCCceEEEecC----CCccEEEecCCCCCCEEEEEE
Confidence 57788888766 89999999983 3568999999999765 3556554332 123468899999999999999
Q ss_pred EEecCCCCCCCCccEEEEccCC-----------CCCCCC----CceEEEeeecceEEEEeeeccccccccceeeEEEEEE
Q psy12061 367 QAINDVGPGPESEVVTIFSAED-----------MPQVAP----QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIK 431 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~-----------~p~~~p----~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~ 431 (626)
.|.|..|.+.++ ...+.|... .|..+| .++++...+.+++.|+|++|. +.+.+|.|+
T Consensus 74 ~a~n~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p~-------~~i~~Y~v~ 145 (201)
T 2ha1_A 74 ISIQQYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSAS-------DTVSGFRVE 145 (201)
T ss_dssp EEECTTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCSC-------TTEEEEEEE
T ss_pred EEEecccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCCC-------CCccEEEEE
Confidence 999999988754 344443321 133233 466777888999999999884 458999999
Q ss_pred EEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCc
Q psy12061 432 YWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482 (626)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~ 482 (626)
|+......... .........++.|.+|+|++.|.|+|+|.|..|.|+...
T Consensus 146 ~~~~~~~~~~~-~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s 195 (201)
T 2ha1_A 146 YELSEEGDEPQ-YLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL 195 (201)
T ss_dssp EEETTTCCCCE-EEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred EEECCCCCcee-EEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence 98654333322 223345567799999999999999999999999876543
No 202
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.84 E-value=3.1e-21 Score=172.10 Aligned_cols=167 Identities=17% Similarity=0.219 Sum_probs=120.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEcc------------CCCcEEEccC---CcEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i~------------~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+. |.+.|.|+|+ +..+. ..+|+.+... .+|.|.+++.+|+|.|+|.|.|
T Consensus 12 v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 89 (211)
T 3tv3_L 12 GSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLV 89 (211)
T ss_dssp ECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEE
T ss_pred EcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEec
Confidence 57899999999999 8899999993 32221 2356654332 3699999999999999999999
Q ss_pred CCC--CceeeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCC----ccCC
Q psy12061 65 VHG--MDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN----ELET 134 (626)
Q Consensus 65 ~~g--~~~~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~----~~~~ 134 (626)
..+ .....+.|.|. .+|.+...+ ....+..|++++|.|.+.+.++|.+.+.|+|||..+...... ....
T Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~ 168 (211)
T 3tv3_L 90 GNWDVIFGGGTKLTVLGQPKAAPSVTLFP-PSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSN 168 (211)
T ss_dssp TTTEEEECCCEEEEECCSCCBCCEEEEEC-CCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTT
T ss_pred CCCceeECCCceEEEeCCCCcCCeeEecC-CchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCC
Confidence 988 35556788887 455554443 333344799999999999976555688999999998642100 0001
Q ss_pred CeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 135 PNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 135 ~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
..+ ...+.|.|..+..+|.|.|+|.|.|..+.....+
T Consensus 169 ~~~-~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 169 NKY-AASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp SSE-EEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCE-EEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 111 1124688999988899999999999987665554
No 203
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=6.1e-21 Score=175.55 Aligned_cols=180 Identities=16% Similarity=0.199 Sum_probs=125.7
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEE---cc-------------CCCcEEEccC-----CcEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---IG-------------SGGRRKIFEN-----GNLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~---i~-------------~~~~~~~~~~-----g~L~i~~v~~~d~G 56 (626)
|.+|++|+|.|.+.|.| .+.|.|+|+ +.. +. ..+|+.+..+ .+|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG 91 (257)
T 1f3r_B 12 VRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDTG 91 (257)
T ss_dssp ECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCCE
T ss_pred ccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccCE
Confidence 57899999999999985 689999995 221 10 1467777543 27999999999999
Q ss_pred EEEEEEEcCCC-------C--ceeeEEEEEEeCC--------------ceeeeCCCceEEecCCcEEEEEEecccCCcce
Q psy12061 57 IYSCTATNVHG-------M--DESKGRLIVLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113 (626)
Q Consensus 57 ~Y~C~a~n~~g-------~--~~~~~~l~v~~~p--------------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~ 113 (626)
.|.|.|.|..| . ....+.|.|...| ..+...|..+.+.+|++++|.|.+.+.|.+
T Consensus 92 ~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-- 169 (257)
T 1f3r_B 92 TYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINN-- 169 (257)
T ss_dssp EEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBT--
T ss_pred EEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCC--
Confidence 99999999865 1 1234678887643 234445677889999999999999998876
Q ss_pred eEEEee--CCEEeccc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCC
Q psy12061 114 AYIWTH--NGVRIGNM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182 (626)
Q Consensus 114 ~i~W~~--~~~~~~~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~ 182 (626)
.+.|+| +|..+... ........++.. ....|.|.+++.+|+|.|+|.|.|........+.|.|...+..
T Consensus 170 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~V~~~~~~ 249 (257)
T 1f3r_B 170 YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLELKAAEQK 249 (257)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEECCSSSCCC
T ss_pred cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEEEeCCCcC
Confidence 568999 55543110 000000123322 2347999999999999999999997522234456777665544
Q ss_pred C
Q psy12061 183 P 183 (626)
Q Consensus 183 p 183 (626)
+
T Consensus 250 ~ 250 (257)
T 1f3r_B 250 L 250 (257)
T ss_dssp C
T ss_pred C
Confidence 3
No 204
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.84 E-value=3.2e-20 Score=158.02 Aligned_cols=148 Identities=20% Similarity=0.215 Sum_probs=110.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc------------CCCcEEEc-cCCcEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG------------SGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~------------~~~~~~~~-~~g~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|++|+|.|.+.+ |.+.|.|+|++..|. ..+|..+. .+|+|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~- 84 (171)
T 1ccz_A 7 GVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD- 84 (171)
T ss_dssp EETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS-
T ss_pred EEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC-
Confidence 678999999999955 889999999887542 12455553 578999999999999999999999887
Q ss_pred ceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEee
Q psy12061 69 DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITN 148 (626)
Q Consensus 69 ~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~ 148 (626)
...+.|.|..++.. ..+.+. +...+|.|.+.+.|.| +|.|+++|..+... ....|.+.+
T Consensus 85 -~~~~~L~V~~~~~~-----p~i~~~-~~~~~L~C~~~~~p~p--~i~W~~~~~~l~~~------------~~~~l~~~~ 143 (171)
T 1ccz_A 85 -TMKFFLYVLEMVSK-----PMIYWE-CSNATLTCEVLEGTDV--ELKLYQGKEHLRSL------------RQKTMSYQW 143 (171)
T ss_dssp -CEEEEEEEECCCCC-----CEEEEE-TTTTEEEEECSSCSSC--EEEEEETTEEEEEE------------SSSEEEEEC
T ss_pred -cEEEEEEEECcCCC-----CEEEEe-cCCcEEEEEeCCCCCc--EEEEEECCEECcCC------------cceEEEEec
Confidence 66778888765321 111121 1124899999998765 56999999988642 122344443
Q ss_pred cCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 149 ASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 149 ~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
.+|+|.|+|.|.|..|..+..+.|
T Consensus 144 --~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 144 --TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp --SCCSSCEEEEEEETTEEEEEEECC
T ss_pred --cCCCceEEEEEEcccCcccceeEE
Confidence 688999999999999987776655
No 205
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.84 E-value=1.2e-20 Score=168.46 Aligned_cols=169 Identities=18% Similarity=0.240 Sum_probs=117.9
Q ss_pred CCCCceEEEEeeeCCCC---CCeeEEEeC--CEEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP---KPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p---~p~i~W~~~--~~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++++|.|.+.|.| .+.|.|+|+ |..+ ...+|+.+..++ +|.|.+++.+|+|.|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (212)
T 1q0x_L 12 TSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCA 91 (212)
T ss_dssp ECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred ecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEEE
Confidence 57899999999999987 479999995 2222 123566655433 799999999999999999
Q ss_pred EEcCCCCce-eeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc---cC
Q psy12061 62 ATNVHGMDE-SKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---LE 133 (626)
Q Consensus 62 a~n~~g~~~-~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~---~~ 133 (626)
|.|..+... ..+.|.|. .+|.+...++. ..+..|+.++|.|.+.+.+++.++|.|+|||..+....... ..
T Consensus 92 ~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 170 (212)
T 1q0x_L 92 LWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQ 170 (212)
T ss_dssp EECSSCEEECCCEEEEECCSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EecCchhhcCCCeEEEEecCCCCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeC
Confidence 999876432 34567774 24444433332 23447999999999999765556789999999986531000 00
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEE
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~ 171 (626)
........+.|.|..+..+|.|.|+|.|.|.......+
T Consensus 171 ~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 171 SNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp TTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred CCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 00000122468999999999999999999987654443
No 206
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.84 E-value=8.5e-20 Score=162.92 Aligned_cols=194 Identities=12% Similarity=0.081 Sum_probs=134.9
Q ss_pred CCCCCCCceEEEee-ecceEEEEeeeccccccccceeeEEEEEEEEecCCCc---cceEE-EE--ecCccceEEEeCCcc
Q psy12061 389 MPQVAPQGVFSRGF-NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE---ETAVY-YL--SRTTRNWALIVGLQP 461 (626)
Q Consensus 389 ~p~~~p~~~~~~~~-~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~---~~~~~-~~--~~~~~~~~~i~~L~p 461 (626)
.|+.+|.++.+... ..+++.++|+++.+.+ ....|.|+|+...... ..... .. .......+.+.+|.+
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~-----~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 77 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETH-----LPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLL 77 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCS-----SCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCT
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCC-----CceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCccccc
Confidence 46668999998877 6789999999876532 2456999998654321 11111 11 122334567789999
Q ss_pred CceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeee------CCCEEEEEEeecCCCCCCCceeeEEEEEE-
Q psy12061 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI------NPTTVHVTWRYVSPSFEEEPIIGYKVRVW- 534 (626)
Q Consensus 462 ~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~------~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~- 534 (626)
++.|.|+|.|.|..|.+ .+..+.+.+...+++.||.++.+... ..+++.|+|++ |...+..+.+|+|+|+
T Consensus 78 ~~~Y~~~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~--p~~~~~~~l~Y~v~y~~ 154 (215)
T 1cd9_B 78 YQYMAIWVQAENMLGSS-ESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKP--WKPSEYMEQECELRYQP 154 (215)
T ss_dssp TSCEEEEEEEEETTEEE-ECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEEC--CGGGTTSCEEEEEEEEE
T ss_pred ceEEEEEEEEECCCCCc-cCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeC--CCCCCeEEEEEEEEEcc
Confidence 99999999999999875 34556777777677789999988776 67889999994 4444444579999998
Q ss_pred EeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCC--cEEEeec
Q psy12061 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSP--AITFQMG 592 (626)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~--~~~~~~~ 592 (626)
..+...+. .........+.+.|.+|.|++.|.|+|+|++..|.|.+|+. .+.++|.
T Consensus 155 ~~~~~~w~--~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~ 212 (215)
T 1cd9_B 155 QLKGANWT--LVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPT 212 (215)
T ss_dssp SSTTCCCE--EEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCC
T ss_pred CCCCCCcE--EEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecC
Confidence 44333211 11122345678999999999999999999999887664432 2445554
No 207
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=2.1e-20 Score=171.24 Aligned_cols=174 Identities=16% Similarity=0.217 Sum_probs=122.9
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc-----------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-----------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.|.| .+.|.|+|++ ..+ ...+|+.+..+ .+|.|.+++.+|+
T Consensus 14 v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 93 (247)
T 2ghw_B 14 VQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDT 93 (247)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHHC
Confidence 57899999999999987 6789999842 111 12357777543 2699999999999
Q ss_pred EEEEEEEEcCCCC--ceeeEEEEEEeC--------------CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee
Q psy12061 56 GIYSCTATNVHGM--DESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119 (626)
Q Consensus 56 G~Y~C~a~n~~g~--~~~~~~l~v~~~--------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 119 (626)
|.|+|.|.|..+. ....+.|.|... +..+..+|....+.+|++++|.|.+.+.|.+ .+.|+|
T Consensus 94 G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~--~v~W~k 171 (247)
T 2ghw_B 94 AVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRS--NLAWYQ 171 (247)
T ss_dssp EEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTT--CEEEEE
T ss_pred EEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccc--eEEEEE
Confidence 9999999997332 233467888654 3334455778889999999999999999876 568999
Q ss_pred --CCEEeccc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEe
Q psy12061 120 --NGVRIGNM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVE 177 (626)
Q Consensus 120 --~~~~~~~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~ 177 (626)
++..+... ........++.. ....|.|.+++.+|+|.|+|.|.|..+.. .....|.|.
T Consensus 172 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 172 QKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 55543110 000000123322 23469999999999999999999865433 445567776
No 208
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.84 E-value=1.6e-20 Score=166.06 Aligned_cols=161 Identities=14% Similarity=0.242 Sum_probs=115.1
Q ss_pred CCCCceEEEEeeeC----CCCCCeeEEEeCCEEcc------------CCCcEEE--ccCCcEEEccCCCCCCEEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPE----AAPKPKFVWKKDGNIIG------------SGGRRKI--FENGNLLISPVSRDDSGIYSCTAT 63 (626)
Q Consensus 2 ~~~G~~~~l~C~~~----g~p~p~i~W~~~~~~i~------------~~~~~~~--~~~g~L~i~~v~~~d~G~Y~C~a~ 63 (626)
|.+|++++|.|.+. +.|.+.+.|+|++..+. ..+|..+ ..+++|.|.+++.+|+|.|+|.|.
T Consensus 6 v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 85 (201)
T 1dr9_A 6 KEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVL 85 (201)
T ss_dssp EETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEEEEE
T ss_pred EEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEEEEE
Confidence 56899999999995 34778999999998872 0234433 234589999999999999999999
Q ss_pred cCCCCce-----eeEEEEEEeCCceeeeCCCc--eEEecCCcEEEEEEec-ccCCcceeEEEeeCCEEeccccCCccCCC
Q psy12061 64 NVHGMDE-----SKGRLIVLHGPSYYEQLPPK--ITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETP 135 (626)
Q Consensus 64 n~~g~~~-----~~~~l~v~~~p~~~~~~~~~--~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~~~ 135 (626)
|..|... ....|.|..++.. |.. .....|+.++|.|.+. +.|.| +|.|++||..+.... .
T Consensus 86 ~~~g~~~~~~~~~~~~l~V~~~~~~----p~~~~~~~~~g~~~~l~C~~~~g~P~p--~i~W~k~g~~l~~~~------~ 153 (201)
T 1dr9_A 86 KYEKDAFKREHLAEVTLSVKADFPT----PSISDFEIPTSNIRRIICSTSGGFPEP--HLSWLENGEELNAIN------T 153 (201)
T ss_dssp ECCTTSCEEEEEEEEEEEEECCCCC----CEEEEEECSSTTEEEEEEEEEEESSCE--EEEEEESSCEECCSE------E
T ss_pred cCCCCccccccccEEEEEEcCCCCC----CceEeccCCCCCeEEEEEecCCccCCC--EEEEEECCEECcccc------c
Confidence 9877653 3566777654221 111 1124688999999995 88887 569999999887532 2
Q ss_pred eeEe-cC-CeE---EEeecCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 136 NINI-DG-GLL---EITNASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 136 ~~~~-~~-~~l---~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
+... .. +.+ .+..+...|.|.|+|.|.|..|..+..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 154 TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 2222 12 222 234556789999999999999988776654
No 209
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.84 E-value=1.7e-20 Score=174.29 Aligned_cols=170 Identities=19% Similarity=0.312 Sum_probs=122.2
Q ss_pred CCCCceEEEEeeeC---CCCCCeeEEEeCCEEccC------------------CCcEEEcc-----CCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPE---AAPKPKFVWKKDGNIIGS------------------GGRRKIFE-----NGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~---g~p~p~i~W~~~~~~i~~------------------~~~~~~~~-----~g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+. +.|.+.|.|+|++..... .+|..+.. +++|.|.+++.+|+
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 96 (268)
T 3mj6_A 17 VHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADE 96 (268)
T ss_dssp EETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGGC
T ss_pred EecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhHC
Confidence 56899999999998 778889999996543211 25555532 36799999999999
Q ss_pred EEEEEEEEcCCCCceee--EEEEEEeCCceeeeCCCceEEecCCcEEEEEEe---cccCCcceeEEEeeC-CEEeccccC
Q psy12061 56 GIYSCTATNVHGMDESK--GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHN-GVRIGNMDL 129 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~--~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~---~~~p~p~~~i~W~~~-~~~~~~~~~ 129 (626)
|.|+|.|.|..+..... ..|.|. | ..|....+.+|++++|.|.+ .+.|.| .+.|+++ +........
T Consensus 97 G~Y~C~~~~~~~~~~~~~~~~l~V~--~----~~p~~~~v~~G~~v~L~C~~~~~~~~p~~--~v~W~~~~~~~~~~~~~ 168 (268)
T 3mj6_A 97 GIYTCEIRLKNESMVMKKPVELWVL--P----EEPRDLRVRVGDTTQMRCSIQSTEEKRVT--KVNWMFSSGSHTEEETV 168 (268)
T ss_dssp EEEEEEEEETTCCCEEEEEEEEEEE--C----CCCSEEEEETTCCEEECCBCEESSSSCCC--EEEEEEECTTCSSCEEE
T ss_pred EEEEEEEEecCCcceEEEEEEEEEe--c----cCCCccccccCCcEEEEEEecCCCCCCcc--ceEEEecCCCCCcceeE
Confidence 99999999976665443 445443 2 34668899999999999999 455554 6699984 321110000
Q ss_pred --------------CccCCCeeE------ecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCC
Q psy12061 130 --------------NELETPNIN------IDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 130 --------------~~~~~~~~~------~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
...-..++. ...+.|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 238 (268)
T 3mj6_A 169 LSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQD 238 (268)
T ss_dssp EEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcC
Confidence 000001111 24678999999999999999999999999999999998543
No 210
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.83 E-value=3.4e-20 Score=165.72 Aligned_cols=169 Identities=21% Similarity=0.251 Sum_probs=129.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEcc---CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFE---NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..|..+ .++.+.. +++|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 30 ~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 109 (215)
T 3mtr_A 30 TWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILV 109 (215)
T ss_dssp ECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEE
Confidence 578999999999999999999999999999765 5666654 34799999999999999999999999998888998
Q ss_pred EEeCCceeeeCCCceE-EecCCcEEEEEEec----ccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEEe
Q psy12061 77 VLHGPSYYEQLPPKIT-IAAHRNLQLRCSAH----TEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEIT 147 (626)
Q Consensus 77 v~~~p~~~~~~~~~~~-v~~g~~~~l~C~~~----~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~ 147 (626)
|..+|... .... ...+..+.|.|... +.|.+...+.|.+++...-.. ..... ....|.|.
T Consensus 110 v~~~P~~p----~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~-------~~~~~~~~~~~~~l~i~ 178 (215)
T 3mtr_A 110 QADTPSSP----SIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS-------KWYDAKEASMEGIVTIV 178 (215)
T ss_dssp ECCCCCCC----EEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEE-------EEEEHHHHHHHTEEEEE
T ss_pred ECCCCCCC----cceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccc-------cccccccccccccEEEC
Confidence 87766432 2222 24578899999743 233333457899887542211 11111 22789999
Q ss_pred ecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 148 NASFADAGEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
++...+.|.|+|.|.|..|....+..+.+..+|.
T Consensus 179 ~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 179 GLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp CCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred CCCCCCEEEEEEEEEeCCcccCcccceeeEeccc
Confidence 9999999999999999999887777777776653
No 211
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.83 E-value=1.7e-20 Score=172.66 Aligned_cols=165 Identities=19% Similarity=0.254 Sum_probs=117.7
Q ss_pred CCCCceEEEEeeeCCCC-----CCeeEEEeC--CEEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-----KPKFVWKKD--GNII------------GSGGRRKIFENG---NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-----~p~i~W~~~--~~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~ 59 (626)
+.+|++++|.|.+.|.| .+.|.|+|+ |..+ ...+|+.+..++ +|.|.+++.+|+|.|+
T Consensus 50 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 129 (254)
T 2c1o_A 50 VTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYY 129 (254)
T ss_dssp ECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEE
T ss_pred ecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEE
Confidence 56899999999999998 489999984 3222 123677665444 7999999999999999
Q ss_pred EEEEcCCCCce-eeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC-----C
Q psy12061 60 CTATNVHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL-----N 130 (626)
Q Consensus 60 C~a~n~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~-----~ 130 (626)
|.|.|..+... ..+.|.|.. +|.+...++... ...|++++|.|.+.+.+++.+.+.|+|||..+..... .
T Consensus 130 C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 208 (254)
T 2c1o_A 130 CVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 208 (254)
T ss_dssp EEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCC
T ss_pred EEEEcCcceEecCCEEEEECCCCCCCeeEeecCChh-hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccc
Confidence 99999866533 234677754 454444333322 3468899999999986555567899999998865410 0
Q ss_pred ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 131 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
......+. ..+.|.|.++..+|+|.|+|.|.|.....
T Consensus 209 ~~~~g~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 209 DSKDSTYS-MSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp CTTTCCEE-EEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCCCcEE-EEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 00011111 23579999999999999999999987653
No 212
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.83 E-value=5e-20 Score=169.01 Aligned_cols=176 Identities=15% Similarity=0.217 Sum_probs=124.4
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEEc-----------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNII-----------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~i-----------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.|.| .+.|.|+|+ +..+ ...+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 91 (256)
T 1nqb_A 12 VKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDS 91 (256)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChhhC
Confidence 57899999999999886 679999994 3222 01367777643 3799999999999
Q ss_pred EEEEEEEEcCCCC-----ceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcc---eeEEEee--CCEEec
Q psy12061 56 GIYSCTATNVHGM-----DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD---VAYIWTH--NGVRIG 125 (626)
Q Consensus 56 G~Y~C~a~n~~g~-----~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~---~~i~W~~--~~~~~~ 125 (626)
|.|.|.|.|..|. ....+.|.|..+|.+. ..|..+.+.+|++++|.|.+.+.|.+. ..+.|+| +|..+.
T Consensus 92 G~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~-~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 170 (256)
T 1nqb_A 92 AVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELT-QTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPK 170 (256)
T ss_dssp EEEEEEECCTTSSSSCSEECCCEEEEECCCCCEE-EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEE
T ss_pred EEEEEEEeeccCccceeEEcCceeeeecccccEE-ecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcE
Confidence 9999999998763 1234678776665443 457788999999999999999988652 3669999 665442
Q ss_pred cc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCc-eEEEEEEEEeC
Q psy12061 126 NM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEG 178 (626)
Q Consensus 126 ~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~-~~~~~~l~v~~ 178 (626)
.. ........++.. ....|.|.+++.+|+|.|+|.|.|..+. ......|.|..
T Consensus 171 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 171 LLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 10 000000123322 2347999999999999999999986443 24455666653
No 213
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.83 E-value=3.1e-21 Score=186.18 Aligned_cols=174 Identities=20% Similarity=0.259 Sum_probs=133.3
Q ss_pred CCCCceEEEEee-----eCCCCCCeeEEEeCCEEccCC-CcEEEccC-CcEEEccCCCCCCEEEEEEEEcCCCC----ce
Q psy12061 2 AGEGGNVTIFCN-----PEAAPKPKFVWKKDGNIIGSG-GRRKIFEN-GNLLISPVSRDDSGIYSCTATNVHGM----DE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~-----~~g~p~p~i~W~~~~~~i~~~-~~~~~~~~-g~L~i~~v~~~d~G~Y~C~a~n~~g~----~~ 70 (626)
+.+|+.++|.|. +.|.|.|.|.|+|+|..+..+ .++.+..+ +.|.|.+++.+|+|.|+|.|.|..|. ..
T Consensus 132 ~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (339)
T 3o4o_C 132 LTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNIT 211 (339)
T ss_dssp EETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEE
T ss_pred EECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEE
Confidence 468999999999 788999999999999999755 56666554 47999999999999999999998874 45
Q ss_pred eeEEEEEEeC----CceeeeCCCceEEecCCcEEEEEEe---cccCCcceeEEEeeCCEEeccccC--CccCCCeeEe-c
Q psy12061 71 SKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSA---HTEELLDVAYIWTHNGVRIGNMDL--NELETPNINI-D 140 (626)
Q Consensus 71 ~~~~l~v~~~----p~~~~~~~~~~~v~~g~~~~l~C~~---~~~p~p~~~i~W~~~~~~~~~~~~--~~~~~~~~~~-~ 140 (626)
..+.|.|... |+.+..++....+..|++++|.|.+ .+.|.+ ..+.|+++|..+..... ......+... .
T Consensus 212 ~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~-~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~ 290 (339)
T 3o4o_C 212 RSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLT-TMLWWTANDTHIESAYPGGRVTEGPRQEYSE 290 (339)
T ss_dssp EEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSS-CEEEEESSSSCSSSSSCSSSCEECCCEECCC
T ss_pred EEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCC-ceEEEEECCeecccccccccceecceEEecc
Confidence 5678888752 2334445777889999999999999 888832 35699999988753210 0000112221 2
Q ss_pred CC------eEEEeecCCCCC-EeEEEEEEeCCCceEEEEEEEE
Q psy12061 141 GG------LLEITNASFADA-GEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 141 ~~------~l~i~~~~~~d~-g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
.+ .|.|.+++.+|+ |.|+|.|.|..|..+..+.+.+
T Consensus 291 ~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 291 NNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp SSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred cCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 23 799999999997 9999999999999887766543
No 214
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.83 E-value=8e-20 Score=157.57 Aligned_cols=160 Identities=11% Similarity=0.142 Sum_probs=116.9
Q ss_pred CCCCceEEEEeeeCCCCCC--eeEEEeCCEEccCCCcEEEc-cCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~i~~~~~~~~~-~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
|.+|++++|+|.+ |.|.| .|.|.+.+..+ ++.... .++.|.|.+++.+|+|.|.|.|.|..+.....+.|.|+
T Consensus 19 v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~ 94 (210)
T 1gsm_A 19 VALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY 94 (210)
T ss_dssp EETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE
Confidence 5689999999999 88888 99999966544 333333 23469999999999999999999998887788999999
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEeccc-CCc--ceeEEEeeCCEEeccccCCc--c---------CCCeeEecCCeE
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELL--DVAYIWTHNGVRIGNMDLNE--L---------ETPNINIDGGLL 144 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p--~~~i~W~~~~~~~~~~~~~~--~---------~~~~~~~~~~~l 144 (626)
.+|..+...+. ....|+.+ |.|.+.+. |.+ .++|.|+|||.++....... . .....-.-.+.|
T Consensus 95 ~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~ 171 (210)
T 1gsm_A 95 AFPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERW 171 (210)
T ss_dssp BCCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEE
T ss_pred ecCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEE
Confidence 98877664443 66788888 99999986 654 57889999999996542100 0 000000112234
Q ss_pred EEeecCCCCCEeEEEEEEeCCCce
Q psy12061 145 EITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 145 ~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+......|.+.|+|.|.+..-..
T Consensus 172 ~~~~~~~D~~~~~tC~a~~~L~~~ 195 (210)
T 1gsm_A 172 RLPPLGTPVPPALYCQATMRLPGL 195 (210)
T ss_dssp ECCCCCSSCCSEEEEEEEEEETTE
T ss_pred eecCCcccCCceEEEEEEeeCCCC
Confidence 444555566689999999876543
No 215
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.83 E-value=5.7e-19 Score=153.57 Aligned_cols=178 Identities=15% Similarity=0.183 Sum_probs=131.1
Q ss_pred CCCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEE
Q psy12061 287 PYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKV 366 (626)
Q Consensus 287 p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v 366 (626)
++.+|.++.+...+.+++.|+|+++ .+.+.+|.|+|+..+ ..+..... ......+.+.+|.|++.|.|+|
T Consensus 6 ~p~~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~-~~~~~~~~----~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 6 DLDNPKDLEVSDPTETTLSLRWRRP-----VAKFDRYRLTYVSPS-GKKNEMEI----PVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp --CCCEEEEEESCCSSEEEEEEECC-----SSCCSEEEEEEECTT-CCEEEEEE----CTTCSEEEEESCCSSCEEEEEE
T ss_pred CCcCCCceEEEecCCCEEEEEEeCC-----CCCccEEEEEEEeCC-CCeeEEEC----CCCCCEEEECCCCCCCEEEEEE
Confidence 3468899999999999999999983 246889999998543 33332222 1123467789999999999999
Q ss_pred EEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEE
Q psy12061 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL 446 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~ 446 (626)
+|.|..|.+.+ ....+.+. |. +|.++++...+.+++.|+|++|. +.+.+|.|+|+..+..... ...
T Consensus 76 ~a~~~~~~s~~-~~~~~~t~---p~-~P~~l~~~~~~~~sv~l~W~~p~-------~~i~~Y~v~~~~~~~~~~~--~~~ 141 (186)
T 1qr4_A 76 VAEKGRHKSKP-TTIKGSTV---VG-SPKGISFSDITENSATVSWTPPR-------SRVDSYRVSYVPITGGTPN--VVT 141 (186)
T ss_dssp EEESSSCBCCC-EEEEEECC---CC-CCSCEEEESCCSSCEEEEECCCS-------SCCSEEEEEEEETTCCCCE--EEE
T ss_pred EEEcCCccCCC-EEEEEECC---CC-CCCccEEEEeCCCEEEEEEECCC-------CcccEEEEEEEeCCCCCce--EEE
Confidence 99997666543 23344443 33 78899999889999999999875 4588999999877653322 223
Q ss_pred ecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeec
Q psy12061 447 SRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489 (626)
Q Consensus 447 ~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~ 489 (626)
......++.+.+|+|++.|.|+|+|.+..|.|++. ...+.|.
T Consensus 142 ~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~ 183 (186)
T 1qr4_A 142 VDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTA 183 (186)
T ss_dssp EETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC-
T ss_pred cCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEec
Confidence 34455779999999999999999999998887654 3455554
No 216
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.83 E-value=3.2e-20 Score=165.79 Aligned_cols=165 Identities=18% Similarity=0.226 Sum_probs=117.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC---EE--c---------cCCCcEEEccC---CcEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG---NI--I---------GSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~---~~--i---------~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.+.|.+.|.|+|.+ .+ + ....|+.+... .+|.|.+++.+|+|.|+|.|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 92 (213)
T 3r06_A 13 ASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYY 92 (213)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECS
T ss_pred ecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEeccc
Confidence 578999999999999999999999832 11 1 12456665533 2799999999999999999998
Q ss_pred CCCC-ceeeEEEEE---EeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecccc-----CCccCCC
Q psy12061 65 VHGM-DESKGRLIV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD-----LNELETP 135 (626)
Q Consensus 65 ~~g~-~~~~~~l~v---~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~-----~~~~~~~ 135 (626)
..+. ......|.| ..+|.+... +....+..|+.++|.|.+.+.+++.+.+.|+|||..+.... ......+
T Consensus 93 ~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 171 (213)
T 3r06_A 93 NYPWTFGPGTKLEIKRADAKPTVSIF-PPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDS 171 (213)
T ss_dssp SSSCEECCCEEEEECCCCBCCEEEEE-CCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred CCceEEcCCceEEEeccCCCceeeee-CCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCC
Confidence 8654 334467777 345555443 33444457888999999999876567889999999986521 0000011
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+ .....|.|......|.|.|+|.|.|.....
T Consensus 172 ~~-~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 172 TY-SLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp CE-EEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred cE-EEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 11 122368888888889999999999986543
No 217
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.83 E-value=2.8e-20 Score=166.48 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=113.6
Q ss_pred CCCCceEEEEeee-CCCC-CCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNP-EAAP-KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~-~g~p-~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a 62 (626)
+.+|++++|.|.+ .+.+ .+.|.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 12 v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 91 (216)
T 2xzc_L 12 AAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGT 91 (216)
T ss_dssp ECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEEE
Confidence 5789999999996 4443 5799999943 221 113566665433 7999999999999999999
Q ss_pred EcCCC--CceeeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-cC----Ccc
Q psy12061 63 TNVHG--MDESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-DL----NEL 132 (626)
Q Consensus 63 ~n~~g--~~~~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~~----~~~ 132 (626)
.|..+ .....+.|.|.. +|.+...++... ...|++++|.|.+.+.+++.+++.|+|||..+... .. ...
T Consensus 92 ~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~ 170 (216)
T 2xzc_L 92 WDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDE-QLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDS 170 (216)
T ss_dssp ECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCT
T ss_pred EeCCCcceECCCEEEEEcCCCCCCceEEeCCChh-hccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccC
Confidence 99876 223345777753 444444333332 23689999999999855443578999999988653 10 000
Q ss_pred CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 133 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 133 ~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
....+ ...+.|.|..+..+|+|.|+|.|.|.....
T Consensus 171 ~~g~~-~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 171 KDSTY-SLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp TTCCE-EEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred CCCCE-EEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 00111 112379999999999999999999987553
No 218
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.83 E-value=1.4e-18 Score=175.43 Aligned_cols=163 Identities=13% Similarity=0.234 Sum_probs=112.3
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEE---c--------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I--------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~---i--------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++++|.|.+.+.+ .+.+.|+|+ |.. + ...+|+.+..+ .+|.|.+++.+|+
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 92 (475)
T 1iga_A 13 KKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPEDT 92 (475)
T ss_pred EeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhhC
Confidence 57899999999998875 579999995 221 1 01356666543 3699999999999
Q ss_pred EEEEEEEEcCCCC------ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCc-ceeEEEeeCCEEe
Q psy12061 56 GIYSCTATNVHGM------DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRI 124 (626)
Q Consensus 56 G~Y~C~a~n~~g~------~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~~~ 124 (626)
|.|.|.|.|..|. ....+.|.|.. +|.+...++. .+.+|+.++|.|.+.+.+++ .+.|.|++++...
T Consensus 93 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~ 170 (475)
T 1iga_A 93 AVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLC--STQPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 170 (475)
T ss_pred EEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCcc--ccCCCCeEEEEEEEeeecCCCceEEEEcCCCccc
Confidence 9999999998762 23456788864 3444433222 23789999999999997433 3577999988543
Q ss_pred ccccCCc---cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 125 GNMDLNE---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 125 ~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
....... ...+.+. ..+.|.|..+...|.|.|+|.|.|..+.
T Consensus 171 ~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 215 (475)
T 1iga_A 171 TARNFPPSQDASGDLYT-TSSQLTLPATQCLAGKSVTCHVKHYTNP 215 (475)
T ss_pred ceEeCCceecCCCCcEE-EEEEEEechhHcCCCceEEEEEEECCCC
Confidence 2111000 0011111 1246888899889999999999998874
No 219
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.83 E-value=1.9e-20 Score=171.39 Aligned_cols=167 Identities=18% Similarity=0.244 Sum_probs=122.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe----------------CCEEccCC---CcEEEccC----CcEEEccCCCCCCEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK----------------DGNIIGSG---GRRKIFEN----GNLLISPVSRDDSGIY 58 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~----------------~~~~i~~~---~~~~~~~~----g~L~i~~v~~~d~G~Y 58 (626)
|.+|++|+|.|.+.+.|.+.|.|+| ++..+... +|+.+..+ .+|.|.+++.+|+|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y 92 (246)
T 4dzb_B 13 SKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFY 92 (246)
T ss_dssp EETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred EeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEEE
Confidence 5689999999999999999999999 44444332 57776542 2699999999999999
Q ss_pred EEEEEcCCC----CceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecccc
Q psy12061 59 SCTATNVHG----MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD 128 (626)
Q Consensus 59 ~C~a~n~~g----~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~ 128 (626)
.|.|.|..+ .....+.|.|.. +|.+....|....+..|+.++|.|.+.+.|++.+.+.|+|||..+....
T Consensus 93 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~ 172 (246)
T 4dzb_B 93 ICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 172 (246)
T ss_dssp EEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCc
Confidence 999998654 223456788874 4555555566666778999999999999876666889999999987532
Q ss_pred CCcc---------CCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCceE
Q psy12061 129 LNEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKIS 169 (626)
Q Consensus 129 ~~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~~~ 169 (626)
.... ....+. ..+.|.|......| .|.|+|.|.|......
T Consensus 173 ~~~~~~~~~~~~~~~g~~~-~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 173 CTDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EECSSCEESSTTSTTCCEE-EEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred ccccccccccccCCCCCEE-EEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 1000 011111 12348888888888 9999999999766543
No 220
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.83 E-value=1.5e-20 Score=168.63 Aligned_cols=169 Identities=17% Similarity=0.242 Sum_probs=116.2
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEEcc-----------------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG-----------------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~i~-----------------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+.|.| .+.|.|+|+ |..+. ..+|+.+..+ ++|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (219)
T 1c1e_H 12 KKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNEDM 91 (219)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcccC
Confidence 57899999999999875 689999996 33221 1357776542 4799999999999
Q ss_pred EEEEEEEEcCCCC----ceeeEEEEEEeC----CceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEecc
Q psy12061 56 GIYSCTATNVHGM----DESKGRLIVLHG----PSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGN 126 (626)
Q Consensus 56 G~Y~C~a~n~~g~----~~~~~~l~v~~~----p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~ 126 (626)
|.|+|.|.|..+. ....+.|.|... |.+...++ ...+..|++++|.|.+.+ .|.| +.|.|+++|..+..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~~~~ 169 (219)
T 1c1e_H 92 ATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAP-GSAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGV 169 (219)
T ss_dssp EEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECC-CSSSCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBCTTE
T ss_pred EEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecC-ccccccCCeEEEEEEcccccCCC-eEEEEEeCCcccce
Confidence 9999999998742 224567877653 44443333 234578999999999998 7766 36699999987532
Q ss_pred ccCCcc-CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 127 MDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 127 ~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
...... ....+ ...+.|.|... ..|.|.|+|.|.|..|.......|
T Consensus 170 ~~~~~~~~~~~~-~~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 170 HTFPAVLQSDLY-TLSSSVTVPSS-PRPSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp EECCCEESSSCE-EEEEEEEEESS-STTTSCCEEEEEEGGGTEEEEEEC
T ss_pred EecCCcccCCeE-EEEEEEEEecc-cCCCCEEEEEEEeCCCCccEEEec
Confidence 111000 00111 12246888444 446699999999998876555444
No 221
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.83 E-value=6e-20 Score=161.99 Aligned_cols=152 Identities=18% Similarity=0.238 Sum_probs=108.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEE--E--ccCCcEEEccCCCCCCEEEEEEEEcCCC-----Cceee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRK--I--FENGNLLISPVSRDDSGIYSCTATNVHG-----MDESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~--~--~~~g~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~ 72 (626)
|.+|++++|.|.+.+ |.+.+.|+|+|..+....+.. . ..++.|.|.+++.+|+|.|+|.|.|... .....
T Consensus 19 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~ 97 (201)
T 1nkr_A 19 VKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDP 97 (201)
T ss_dssp EETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCC
T ss_pred cCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCC
Confidence 468999999999975 778999999998664221111 1 1245799999999999999999987532 23445
Q ss_pred EEEEEEeC---CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE--ecCCeEEEe
Q psy12061 73 GRLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEIT 147 (626)
Q Consensus 73 ~~l~v~~~---p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~ 147 (626)
+.|.|... |.+... |. ..+.+|++++|.|.+.+.+ ..+.|+|+|..+..... ..+.. .....|.|.
T Consensus 98 ~~l~V~~~~~~p~i~~~-p~-~~v~~G~~v~L~C~~~~~~---~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~L~i~ 168 (201)
T 1nkr_A 98 LDIVIIGLYEKPSLSAQ-PG-PTVLAGENVTLSCSSRSSY---DMYHLSREGEAHERRLP----AGPKVNGTFQADFPLG 168 (201)
T ss_dssp EEEEEECSSCCCEEEEE-SC-SEECTTCEEEEEEEESSCC---SEEEEEETTCSSCEEEE----CEEEETTEEEEEEEEE
T ss_pred EEEEeeccCCCCceecC-CC-CccCCCCeEEEEEeCCCCC---ceEEEEECCcccCcccc----cccccCCceEEEEEeC
Confidence 68888753 344333 33 4789999999999988643 36789999987653210 00111 125689999
Q ss_pred ecCCCCCEeEEEEEEeCC
Q psy12061 148 NASFADAGEYECVVKSTV 165 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~ 165 (626)
+++ |+|.|+|.|.+..
T Consensus 169 ~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 169 PAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp ECC--SCEEEEEEEEETT
T ss_pred CcC--CCeeEEEEEEcCC
Confidence 998 9999999998763
No 222
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.83 E-value=2.2e-20 Score=166.83 Aligned_cols=157 Identities=21% Similarity=0.289 Sum_probs=113.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EE---cc---------CCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---i~---------~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.+.|.+.|.|+|++ .. +. ..+|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 92 (213)
T 3nl4_L 13 EPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQSTY 92 (213)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECC
T ss_pred EcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecCC
Confidence 568999999999999999999999942 11 10 13566665443 699999999999999999999
Q ss_pred CCCC---ceeeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEecccc-----CCcc
Q psy12061 65 VHGM---DESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMD-----LNEL 132 (626)
Q Consensus 65 ~~g~---~~~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~~~-----~~~~ 132 (626)
..+. ....+.|.|.. +|.+... +....+..|+.++|.|.+.+ .|.| .+.|+|+|..+.... ....
T Consensus 93 ~~~~~~~~~~~~~l~V~~~~~~p~v~~~-~~~~~~~~g~~v~l~C~~~g~~P~~--~v~W~k~g~~~~~~~~~~~~~~~~ 169 (213)
T 3nl4_L 93 ENPTYVSFGGGTEVGVKGDPVAPTVLIF-PPSADLVATGTVTIVCVANKYFPDV--TVTWEVDGTTQTTGIENSKTPQNS 169 (213)
T ss_dssp SSTTTCEECCCEEEEEECCCBCCEEEEE-CCCHHHHTTSEEEEEEEEEEEBSCC--EEEEEETTEECCSSEEEEECCCCT
T ss_pred CCceeEEeCCCeEEEEeCCCcCCeEEEe-CCchhhccCCcEeEEEEEecccCCc--EEEEEeCCccCCCCeecccCcccC
Confidence 8773 34456777743 4444333 23334567999999999998 7754 669999999886421 0000
Q ss_pred CCCeeEecCCeEEEeecCCCCCEeEEEEEE
Q psy12061 133 ETPNINIDGGLLEITNASFADAGEYECVVK 162 (626)
Q Consensus 133 ~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~ 162 (626)
....+. ..+.|.|.++..+|.|.|+|.|.
T Consensus 170 ~~~~~~-~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 170 ADCTYN-LSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp TTCCEE-EEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeEE-EEEEEEecHHHcCCCCeEEEEEE
Confidence 111221 23579999999999999999999
No 223
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.83 E-value=2.1e-20 Score=173.13 Aligned_cols=151 Identities=26% Similarity=0.354 Sum_probs=121.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCC-CCce---eeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVH-GMDE---SKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~-g~~~---~~~~l~v 77 (626)
+.+|++++|.|.+. |.|.|.| ||.++...+. .+.|.|..+..+|.|.|+|.|.|.. |... ..+.|.|
T Consensus 110 v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~~-----~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V 180 (265)
T 2oz4_A 110 VSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLGP-----RAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV 180 (265)
T ss_dssp EETTCEEEEEEECC--TTSEEEE--SSCSSSCCSS-----EECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEE
T ss_pred ecCCCcEEEEEEcc--CCCEEEE--CCEEccCCCC-----cEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEE
Confidence 46899999999998 8999999 8888743321 2458899999999999999998654 7655 5678999
Q ss_pred EeCCceeee-CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 78 LHGPSYYEQ-LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 78 ~~~p~~~~~-~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
..+|.+... .|.+..+.+|++++|.|.+.|.|.|. +.|+|+|..+.. .+.+ ..++.+|+|.
T Consensus 181 ~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~--i~W~~~~~~~~~--------------~g~~--~~v~~~d~G~ 242 (265)
T 2oz4_A 181 LYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPE--LKCLKDGTFPLP--------------IGES--VTVTRDLEGT 242 (265)
T ss_dssp EEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCE--EEEEETTTEECC--------------TTSC--EECCGGGCEE
T ss_pred EeCCccccccCCCccEEcCCCeEEEEeECccCCCCe--EEEEECCcccCC--------------CCcE--EEeehhhCeE
Confidence 888877543 35678999999999999999999874 589999873322 1222 2478899999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCC
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGP 179 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~ 179 (626)
|+|.|.|..|..+..+.|.|..+
T Consensus 243 Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 243 YLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp EEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEECCCCcEEEEEEEEEecC
Confidence 99999999999999999998753
No 224
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.83 E-value=2e-20 Score=167.91 Aligned_cols=169 Identities=16% Similarity=0.211 Sum_probs=116.0
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCC---EE------------cc---CCCcEEEcc---CCcEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDG---NI------------IG---SGGRRKIFE---NGNLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~---~~------------i~---~~~~~~~~~---~g~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++++|.|.+.+. |.+.|.|+|.. .+ .. ..+|+.+.. +.+|.|.+++.+|+|.|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (218)
T 3s96_B 12 FSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAIYI 91 (218)
T ss_dssp EETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEEEE
Confidence 5689999999999999 89999999921 10 00 124666543 236999999999999999
Q ss_pred EEEEcCCC-----CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCC
Q psy12061 60 CTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130 (626)
Q Consensus 60 C~a~n~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~ 130 (626)
|.|.|..| .....+.|.|.. +|.+...+ ....+..|+.++|.|.+.+.+++.+.+.|+|||..+......
T Consensus 92 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~-~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~ 170 (218)
T 3s96_B 92 CGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFP-PSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDT 170 (218)
T ss_dssp EEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEEC-CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC------
T ss_pred EEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeC-CCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceec
Confidence 99999887 334457888874 44444333 333445779999999999843333578999999998652100
Q ss_pred ---ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 131 ---ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 131 ---~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
......+. ..+.|.|......|.|.|+|.|.|..+..+..+
T Consensus 171 ~~~~~~~~~~~-~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 171 SNPTKEGNKFM-ASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp --------CEE-EEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred CcccccCCcEE-EEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 00011111 124588888888899999999999987665443
No 225
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.83 E-value=7e-20 Score=168.20 Aligned_cols=182 Identities=16% Similarity=0.198 Sum_probs=124.4
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEe--CCEEc-----------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKK--DGNII-----------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~--~~~~i-----------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.|.+ .+.|.|+| .+..+ ...+|+.+..++ +|.|.+++.+|+
T Consensus 13 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 92 (253)
T 3uzq_A 13 VKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGDT 92 (253)
T ss_dssp ECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcccC
Confidence 57899999999999864 67999999 22111 113567766543 399999999999
Q ss_pred EEEEEEEEcCCCCc-eeeEEEEEEeC--------------CceeeeCCCceEEecCCcEEEEEEecccCCc--ceeEEEe
Q psy12061 56 GIYSCTATNVHGMD-ESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELL--DVAYIWT 118 (626)
Q Consensus 56 G~Y~C~a~n~~g~~-~~~~~l~v~~~--------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p--~~~i~W~ 118 (626)
|.|.|.|.|..+.. ...+.|.|... +..+...|....+.+|++++|.|.+.+.+.+ ...+.|+
T Consensus 93 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~ 172 (253)
T 3uzq_A 93 AVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWY 172 (253)
T ss_dssp EEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEE
T ss_pred EEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEE
Confidence 99999999976654 34567777642 3445556778999999999999999998765 1356899
Q ss_pred eC--CEEec---c-cc-CCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCC
Q psy12061 119 HN--GVRIG---N-MD-LNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLP 183 (626)
Q Consensus 119 ~~--~~~~~---~-~~-~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p 183 (626)
|+ +.... . .. .......++.. ....|.|.+++.+|+|.|+|.|.|..+.. .....|.|...+.+|
T Consensus 173 r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~~~ 249 (253)
T 3uzq_A 173 QQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLEHH 249 (253)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC----
T ss_pred EECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCCCc
Confidence 84 22221 0 00 00000122222 22369999999999999999999876543 556778888766554
No 226
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.82 E-value=1.7e-20 Score=168.84 Aligned_cols=178 Identities=16% Similarity=0.231 Sum_probs=118.4
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EE---c---c-----------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I---G-----------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---i---~-----------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.| .+.|.|+|++ .. + . ..+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~ 91 (227)
T 1mju_H 12 VKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDS 91 (227)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCcccC
Confidence 57899999999999887 6899999853 21 1 1 1357777542 3799999999999
Q ss_pred EEEEEEEEcCCCC-ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccC
Q psy12061 56 GIYSCTATNVHGM-DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 56 G~Y~C~a~n~~g~-~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~ 129 (626)
|.|.|.|.|..+. ....+.|.|.. +|.+....|. ..+..|+.++|.|.+.+. |.| +.+.|++++..+.....
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~~~~~~~ 169 (227)
T 1mju_H 92 AVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEP-VTLTWNSGSLSSGVHTF 169 (227)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSC-CEEEEGGGTBCTTEEEC
T ss_pred EEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCC-eEEEEecCCCcCCcEEC
Confidence 9999999986432 22346788864 3444443333 346789999999999986 543 57799999876532110
Q ss_pred Ccc-CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 130 NEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 130 ~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
... ....+ ...+.|.|..+..+| |.|+|.|.|..+.......+.+..+|..|
T Consensus 170 ~~~~~~g~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~p~~~ 222 (227)
T 1mju_H 170 PAVLQSDLY-TLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKP 222 (227)
T ss_dssp CCEEETTEE-EEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCCCC----
T ss_pred CceecCCeE-EEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCCCCCCCC
Confidence 000 00111 134578999988878 99999999988877777777777777654
No 227
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.82 E-value=3.9e-20 Score=169.75 Aligned_cols=164 Identities=16% Similarity=0.236 Sum_probs=115.8
Q ss_pred CCCCceEEEEeeeCCCC-----CCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-----KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++|+|.|.+.+.| .+.|.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|+
T Consensus 46 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 125 (252)
T 3bkj_L 46 VNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYY 125 (252)
T ss_dssp ECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEEE
Confidence 57899999999999988 6899999954 111 113566665443 7999999999999999
Q ss_pred EEEEcCCCCce-eeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-cC----C
Q psy12061 60 CTATNVHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-DL----N 130 (626)
Q Consensus 60 C~a~n~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~~----~ 130 (626)
|.|.|..+... ....|.|.. +|.+...++.. .+..|++++|.|.+.+.+++.+++.|+|||..+... .. .
T Consensus 126 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 204 (252)
T 3bkj_L 126 CFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 204 (252)
T ss_dssp EEECSBSSCEECCCEEEEECCCCBCCEEEEECCCH-HHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCC
T ss_pred EEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCCh-hhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcc
Confidence 99998866432 335677754 34444333332 234799999999999965444678999999988643 10 0
Q ss_pred ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 131 ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 131 ~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
....+.+ ...+.|.|.++..+|+|.|+|.|.|....
T Consensus 205 ~~~~g~~-~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 205 DSKDSTY-SMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp CTTTCCE-EEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred cCCCCCE-EEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 0000111 11246999999999999999999997654
No 228
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.82 E-value=1.1e-20 Score=169.77 Aligned_cols=177 Identities=15% Similarity=0.166 Sum_probs=123.9
Q ss_pred CCCCceEEEEeeeCC-CCCCe----eEEEeCCEEcc-------------CCCcEEEcc--------CCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEA-APKPK----FVWKKDGNIIG-------------SGGRRKIFE--------NGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~----i~W~~~~~~i~-------------~~~~~~~~~--------~g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+.+ .|.+. |.|+|++.... ..+|..+.. +++|.|.+++.+|+
T Consensus 11 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 90 (221)
T 3eow_R 11 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDE 90 (221)
T ss_dssp CCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCC
T ss_pred EEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHC
Confidence 678999999999954 45444 99999865221 145666654 45799999999999
Q ss_pred EEEEEEEEcCC-CCceeeEEEEEEeCCceeeeCCCceEEecCCcE-EEEEEec-ccCCcceeEEEeeCCEEeccccCCcc
Q psy12061 56 GIYSCTATNVH-GMDESKGRLIVLHGPSYYEQLPPKITIAAHRNL-QLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNEL 132 (626)
Q Consensus 56 G~Y~C~a~n~~-g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~-~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~ 132 (626)
|.|+|.+.|.. +.....+.|.|..+|.+...+.... ..|+.+ .|.|.+. +.|.| .+.|++++...........
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p--~v~W~k~~~~~~~~~~~~~ 166 (221)
T 3eow_R 91 GSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPA--QITWHSDLGGMPQTSQVPG 166 (221)
T ss_dssp SCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCC--CEEEECSSSCCCCCEEECC
T ss_pred eEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc--cCCceEEEEEEECCCccCCC--eeEEEeCCCCCCccceeec
Confidence 99999999977 7777788888888887765433333 678888 4999988 77776 5699987543322110000
Q ss_pred CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCCCC
Q psy12061 133 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGLPG 184 (626)
Q Consensus 133 ~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 184 (626)
.........+.|.|.++...|.|.|+|.|.|..+.. ...+.|...|..|.
T Consensus 167 ~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~--~~~~~v~~~~~~~~ 216 (221)
T 3eow_R 167 FLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEK--PQLLTVSLTVYYPH 216 (221)
T ss_dssp CCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSS--CEEEEECCCCCC--
T ss_pred CCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCC--CeEEEEEEEEEccc
Confidence 001111123579999999999999999999988764 44455666666553
No 229
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.82 E-value=1.1e-19 Score=165.37 Aligned_cols=161 Identities=20% Similarity=0.303 Sum_probs=113.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEc---------------cCCCcEEEcc----CCcEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNII---------------GSGGRRKIFE----NGNLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i---------------~~~~~~~~~~----~g~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++|+|.|. .+.|.|.|.|+|+ +..+ ...+|+.+.. +.+|.|.+++.+|+|.|+|
T Consensus 12 v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 90 (238)
T 2p1y_A 12 AVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYFC 90 (238)
T ss_dssp EETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEEE
T ss_pred EeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEEE
Confidence 568999999999 7889999999995 2111 1135666653 2369999999999999999
Q ss_pred EEEcCCCCc-----eeeEEEEEEeCCc-----------eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCC--E
Q psy12061 61 TATNVHGMD-----ESKGRLIVLHGPS-----------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--V 122 (626)
Q Consensus 61 ~a~n~~g~~-----~~~~~l~v~~~p~-----------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~--~ 122 (626)
.|.|..|.. ...+.|.|...+. .+...|....+.+|++++|.|.+.+.|.| .+.|+|++ .
T Consensus 91 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~--~i~W~k~~~~~ 168 (238)
T 2p1y_A 91 ASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFD--YFPWYQQFPGE 168 (238)
T ss_dssp EEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCC--EEEEEEECTTS
T ss_pred EEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCC--cEEEEEECCCC
Confidence 999987631 1346788876553 44555778899999999999999998876 56899864 1
Q ss_pred ---Eeccc--cCCccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeCC
Q psy12061 123 ---RIGNM--DLNELETPNINID------GGLLEITNASFADAGEYECVVKSTV 165 (626)
Q Consensus 123 ---~~~~~--~~~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~~ 165 (626)
.+... ........++... ...|.|.+++.+|+|.|+|.|.|..
T Consensus 169 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 169 GPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 11100 0000011233332 3589999999999999999999974
No 230
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.82 E-value=1.4e-19 Score=161.88 Aligned_cols=162 Identities=21% Similarity=0.274 Sum_probs=113.8
Q ss_pred CCCCceEEEEeeeCCC-------CCCeeEEEeCCEE------c-----------cCCCcEEEccC-----CcEEEccCCC
Q psy12061 2 AGEGGNVTIFCNPEAA-------PKPKFVWKKDGNI------I-----------GSGGRRKIFEN-----GNLLISPVSR 52 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-------p~p~i~W~~~~~~------i-----------~~~~~~~~~~~-----g~L~i~~v~~ 52 (626)
+.+|++|+|.|.+.+. +.+.|.|+|++.. + ...+|+.+..+ .+|.|.+++.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 91 (214)
T 2zg1_A 12 VQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARM 91 (214)
T ss_dssp EETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCCG
T ss_pred EecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCCH
Confidence 5689999999999754 5779999998752 1 12367776543 3799999999
Q ss_pred CCCEEEEEEEEcCCCCce----eeEEEEEEeCCc--eeeeCCCceEEecCCcEEEEEEeccc-C-CcceeEEEeeCCEEe
Q psy12061 53 DDSGIYSCTATNVHGMDE----SKGRLIVLHGPS--YYEQLPPKITIAAHRNLQLRCSAHTE-E-LLDVAYIWTHNGVRI 124 (626)
Q Consensus 53 ~d~G~Y~C~a~n~~g~~~----~~~~l~v~~~p~--~~~~~~~~~~v~~g~~~~l~C~~~~~-p-~p~~~i~W~~~~~~~ 124 (626)
+|+|.|.|.+.+..+... ....|.|...|. .+.. +. .+.+|++++|.|.+.+. + .|.+.+.|++++..+
T Consensus 92 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~ 168 (214)
T 2zg1_A 92 EDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSP 168 (214)
T ss_dssp GGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSS
T ss_pred hhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCcc
Confidence 999999999998864322 457888877432 2222 22 26799999999999875 1 123467999998654
Q ss_pred ccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 125 GNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
... + ....+.|.|..+..+|.|.|+|.|.|..+.......+.
T Consensus 169 ~~~--------~-~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 169 LDP--------E-TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp SCS--------S-CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred CCC--------C-ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 211 1 13567899999999999999999999876544444333
No 231
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.82 E-value=4.9e-20 Score=164.04 Aligned_cols=165 Identities=14% Similarity=0.244 Sum_probs=114.9
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEEcc----------------CCCcEEEccC-----CcEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNIIG----------------SGGRRKIFEN-----GNLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~i~----------------~~~~~~~~~~-----g~L~i~~v~~~d~G 56 (626)
+.+|++++|.|.+.|.| .+.|.|+|+ |..+. ..+|+.+..+ .+|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 91 (210)
T 3d9a_H 12 VKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTA 91 (210)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred ecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcccCE
Confidence 57899999999999876 479999985 32210 2467777542 27999999999999
Q ss_pred EEEEEEEcCCCCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccccCCc
Q psy12061 57 IYSCTATNVHGMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 57 ~Y~C~a~n~~g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
.|.|.|.|.. .....+.|.|.. +|.+...++. ..+..|++++|.|.+.+. |.| +++.|++++..+.......
T Consensus 92 ~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~~~~~~~ 168 (210)
T 3d9a_H 92 TYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLSSGVHTFPA 168 (210)
T ss_dssp EEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBCTTEEECCC
T ss_pred EEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCC-cEEEEeeCCcccceEEcCC
Confidence 9999999864 223346777763 3444433332 346789999999999987 654 4679999988643211000
Q ss_pred c-CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEE
Q psy12061 132 L-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171 (626)
Q Consensus 132 ~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~ 171 (626)
. ....+ ...+.|.|.++...| |.|+|.|.|..|.....
T Consensus 169 ~~~~~~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 169 VLQSDLY-TLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp EEETTEE-EEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCCcE-EEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 0 00111 123569999998877 99999999999875443
No 232
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.82 E-value=6.4e-21 Score=182.21 Aligned_cols=162 Identities=15% Similarity=0.253 Sum_probs=109.7
Q ss_pred ceEEEEeeeCCC-C-CCeeEEEeCCEEccCCCcE--EEccCC------cEEEccCCCCCCEEEEEEEEcCCCCceeeEEE
Q psy12061 6 GNVTIFCNPEAA-P-KPKFVWKKDGNIIGSGGRR--KIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKGRL 75 (626)
Q Consensus 6 ~~~~l~C~~~g~-p-~p~i~W~~~~~~i~~~~~~--~~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 75 (626)
++++|.|.+.|. | .+.|.|+|||.+|..+.+. .+..+| .|.|..+..+|+|.|+|.|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 699999999986 4 4699999999998644221 122233 47788888889999999999987654333221
Q ss_pred EE---EeCCceeeeCCCceEEecCCcEEEEEEecccC-Cc-ceeEEEeeCC-EEeccccCCc--cCCCeeEecCCeEEEe
Q psy12061 76 IV---LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE-LL-DVAYIWTHNG-VRIGNMDLNE--LETPNINIDGGLLEIT 147 (626)
Q Consensus 76 ~v---~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p-~~~i~W~~~~-~~~~~~~~~~--~~~~~~~~~~~~l~i~ 147 (626)
.+ ...|.+...+|....+.+|++++|.|.+.+.+ .| .+.|.|+|++ ..+....... ....++. ..+.|.|.
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~-~~~~L~I~ 183 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT-VTSTLPVG 183 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE-EEEEEECC
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE-EEEEEEEC
Confidence 11 12344445566666788999999999999864 33 1477999974 4443211000 0011111 34479999
Q ss_pred ecCCCCCEeEEEEEEeCCCce
Q psy12061 148 NASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 148 ~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
+++.+|+|.|+|.|.|..+..
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHHHHTTCCEEEEEECTTSSS
T ss_pred HHHccCCCCEEEEEECCCCCC
Confidence 999999999999999987543
No 233
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.82 E-value=2.2e-19 Score=154.30 Aligned_cols=150 Identities=21% Similarity=0.203 Sum_probs=110.6
Q ss_pred CCCCceEEEEeeeCC-CCCCeeEEEeC-CEEc------------cCC--CcEEE-ccCCcEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEA-APKPKFVWKKD-GNII------------GSG--GRRKI-FENGNLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g-~p~p~i~W~~~-~~~i------------~~~--~~~~~-~~~g~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++|+|.|.+.+ .+.+.|.|+|+ +..| ... +|+.+ ..+++|.|.+++.+|+|.|+|.+.+
T Consensus 11 v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~ 90 (180)
T 2dru_A 11 AITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLH 90 (180)
T ss_dssp EETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEEES
T ss_pred EEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEEEc
Confidence 678999999999865 34689999994 3322 122 67777 6778999999999999999999988
Q ss_pred CCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeE
Q psy12061 65 VHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLL 144 (626)
Q Consensus 65 ~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l 144 (626)
.. .....+.|.|..++.. +.+. ..+++++|.|.+...|.| .|.|++++..+.. ..+..|
T Consensus 91 ~~-~~~~~~~L~V~~~~~~-----P~i~-~~~~~v~L~C~~~~gp~p--~i~W~~~~~~l~~------------~~~~~l 149 (180)
T 2dru_A 91 ET-EDQWKITMEVYEMVSK-----PMIY-WECSNATLTCEVLEGTDV--ELKLYQGKEHLRS------------LRQKTM 149 (180)
T ss_dssp SS-EEEEEEEEEEECCCCC-----CEEE-EEGGGTEEEEECSSCTTC--EEEEEETTEEEEE------------ESSSEE
T ss_pred CC-eEEEEEEEEEECCCCC-----CEEE-ecCCCEEEEEEeCCCCCC--EEEEEECCeECcC------------CCCCEE
Confidence 76 5556678888664321 1222 356789999999443655 5699999998751 134456
Q ss_pred EEeecCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 145 EITNASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 145 ~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
.+.. ..|+|.|+|.|.|..|..++...+
T Consensus 150 ~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 150 SYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEE--hhcCccEEEEEecCcCccccceeE
Confidence 6633 789999999999999987665543
No 234
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.82 E-value=1.7e-20 Score=188.00 Aligned_cols=169 Identities=15% Similarity=0.242 Sum_probs=119.2
Q ss_pred CCCCceEEEEeeeCCC-CCC-eeEEEeCCEEccC--C------CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 2 AGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS--G------GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p-~i~W~~~~~~i~~--~------~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+.+|+.++|.|.+.|. |.| .|.|+|++..+.. . +.+.+ .+.|.|.++..+| |.|+|.|.|..|....
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~ 211 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVTSSTWPS-QSITCNVAHPASSTKV 211 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEE--EEEEEECSTTTTT-SCCEEEEEETTTTEEE
T ss_pred CCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEE--EEEEEEchhhcCC-CeEEEEEEeCCCCcce
Confidence 3589999999999986 777 9999999886421 1 11111 2469999999999 9999999999987654
Q ss_pred eEEEEE------------------EeCCceeeeCCCceE-EecCCcEEEEEEecccC--CcceeEEEeeCCEEeccccCC
Q psy12061 72 KGRLIV------------------LHGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEE--LLDVAYIWTHNGVRIGNMDLN 130 (626)
Q Consensus 72 ~~~l~v------------------~~~p~~~~~~~~~~~-v~~g~~~~l~C~~~~~p--~p~~~i~W~~~~~~~~~~~~~ 130 (626)
...+.+ ..+|.+...+|.... +.+|++++|.|.+.+.+ ++.+.|.|+|+|..+......
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~ 291 (444)
T 1igt_B 212 DKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQ 291 (444)
T ss_dssp EEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCB
T ss_pred EEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccc
Confidence 444432 124544344554443 68899999999999985 444678999999887643210
Q ss_pred c---cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 131 E---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 131 ~---~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
. .....+ ...+.|.|.+++.+|+|.|+|.|.|..|.......+
T Consensus 292 ~~~~~~~~~~-~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v 337 (444)
T 1igt_B 292 THREDYNSTL-RVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTI 337 (444)
T ss_dssp CCEEECSSSE-EEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEE
T ss_pred cceeCCCCcE-EEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEE
Confidence 0 000111 123579999999999999999999998876433343
No 235
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.82 E-value=7.3e-20 Score=166.64 Aligned_cols=169 Identities=15% Similarity=0.178 Sum_probs=117.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EE------------ccCCCcEEEcc---CCcEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NI------------IGSGGRRKIFE---NGNLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~------------i~~~~~~~~~~---~g~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.+.|.+.|.|+|++ .. ....+|+.+.. +.+|.|.+++.+|+|.|+|.|.|
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 115 (237)
T 3sob_L 36 ASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSY 115 (237)
T ss_dssp EETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeecc
Confidence 568999999999999999999999832 11 11245666653 33699999999999999999998
Q ss_pred CCCCc-eeeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecccc----CCccCCCe
Q psy12061 65 VHGMD-ESKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMD----LNELETPN 136 (626)
Q Consensus 65 ~~g~~-~~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~----~~~~~~~~ 136 (626)
..+.. ...+.|.|.. +|.+...+ ....+..|++++|.|.+.+.+++.+++.|+|||..+.... ........
T Consensus 116 ~~~~~~~~~~~l~V~~~~~~p~v~~~~-~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g 194 (237)
T 3sob_L 116 TTPPTFGQGTKVEIKRTVAAPSVFIFP-PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDS 194 (237)
T ss_dssp SSSCEECCCEEEEEECCCBCCEEEEEC-CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTC
T ss_pred CCceEEcCcEEEEEecCCCCCceEEeC-CChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCC
Confidence 77642 3345777743 44443332 2333446889999999999654245789999999986421 00000111
Q ss_pred eEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEE
Q psy12061 137 INIDGGLLEITNASFADAGEYECVVKSTVGKISTK 171 (626)
Q Consensus 137 ~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~ 171 (626)
.......|.|.....+|.|.|+|.|.|........
T Consensus 195 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 195 TYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp CEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred cEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 11123468899999999999999999987654333
No 236
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.82 E-value=5.1e-20 Score=166.26 Aligned_cols=172 Identities=15% Similarity=0.168 Sum_probs=114.4
Q ss_pred CCCCceEEEEeeeCCCCCC---eeEEEeCCEEcc----------------CCCcEEEc----------cCCcEEEccCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKP---KFVWKKDGNIIG----------------SGGRRKIF----------ENGNLLISPVSR 52 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p---~i~W~~~~~~i~----------------~~~~~~~~----------~~g~L~i~~v~~ 52 (626)
+..|++|+|.|.+.+.|.+ .|.|+|++..+. ...|.... .+++|.|.+++.
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 92 (225)
T 4fmk_A 13 GRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRV 92 (225)
T ss_dssp EETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCG
T ss_pred EecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCH
Confidence 4679999999999998776 489999765331 11222221 235799999999
Q ss_pred CCCEEEEEEEEcCCCCceee-EEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 53 DDSGIYSCTATNVHGMDESK-GRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 53 ~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
+|+|.|+|.|.|..+..... ..+.+..+|..... +.......++.+.+.|.+.+.+++ ..+.|.+++..+.......
T Consensus 93 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~~~~P~-~~~~w~~~~~~~~~~~~~~ 170 (225)
T 4fmk_A 93 EDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAE-AQEVTIGPQSVAVARCVSTGGRPP-ARITWISSLGGEAKDTQEP 170 (225)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-ECCBCCSSSCEEEEEEEEEEEBSC-CEEEEECSSCCEEEEEEEE
T ss_pred HHCcceEEEEEeCCCcceeeeeeeeeecCCceeec-ccceeecceeeeeeeeeecCCCCC-CEEEEEECCccccCCcceE
Confidence 99999999999987765554 45555555554443 444556677777777776654433 3568998876654331100
Q ss_pred cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 132 LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 132 ~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
..........+.|.|.++...|+|.|+|.|.|..|.....+.+.
T Consensus 171 ~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 171 GIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp CSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred EecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 10111111234699999999999999999999988764444333
No 237
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.82 E-value=1.4e-19 Score=166.10 Aligned_cols=162 Identities=17% Similarity=0.282 Sum_probs=112.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC-----EEc---------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG-----NII---------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~-----~~i---------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++++|.|.+.+.|.|.|.|+|+. ..+ ...+|+.+..++ +|.|.+++.+|+|.|.|.|.|
T Consensus 16 v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 95 (250)
T 3esu_F 16 ASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGN 95 (250)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred eeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEee
Confidence 578999999999999999999999943 111 123566554333 699999999999999999999
Q ss_pred CCCCc-eeeEEEEEEeC------------------CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEE
Q psy12061 65 VHGMD-ESKGRLIVLHG------------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVR 123 (626)
Q Consensus 65 ~~g~~-~~~~~l~v~~~------------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~ 123 (626)
..+.. ...+.|.|..+ +......|....+.+|++++|.|.+.+.+.+...+.|+|+ +..
T Consensus 96 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~ 175 (250)
T 3esu_F 96 TLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQG 175 (250)
T ss_dssp SSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSC
T ss_pred CCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCC
Confidence 76653 33456777553 1222234567889999999999999987744557799997 443
Q ss_pred ecccc-C---------CccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEe
Q psy12061 124 IGNMD-L---------NELETPNINID------GGLLEITNASFADAGEYECVVKS 163 (626)
Q Consensus 124 ~~~~~-~---------~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n 163 (626)
+.... + ......|+.+. ...|.|.+++.+|+|.|+|.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 176 PEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 32110 0 00001333332 12699999999999999999997
No 238
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=8.3e-20 Score=166.46 Aligned_cols=162 Identities=19% Similarity=0.216 Sum_probs=117.1
Q ss_pred CCCCceEEEEeeeCCCC----CCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP----KPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p----~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++|+|.|.+.+.| .+.|.|+|++ ..+ ....|+.+..++ +|.|.+++.+|+|.|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 92 (240)
T 1moe_A 13 VSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYC 92 (240)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEEE
Confidence 57899999999999998 7899999952 211 023566665433 69999999999999999
Q ss_pred EEEcCCCC-ceeeEEEEEEeCC-----ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEEecc------
Q psy12061 61 TATNVHGM-DESKGRLIVLHGP-----SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIGN------ 126 (626)
Q Consensus 61 ~a~n~~g~-~~~~~~l~v~~~p-----~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~~------ 126 (626)
.|.|..+. ....+.|.|..++ ......|....+.+|++++|.|.+.+.|.+...+.|+|+ +..+..
T Consensus 93 ~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~ 172 (240)
T 1moe_A 93 QQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDP 172 (240)
T ss_dssp EECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEET
T ss_pred EEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcc
Confidence 99998765 4456788887643 333344677889999999999999998865557799996 322210
Q ss_pred -cc---CCccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEe
Q psy12061 127 -MD---LNELETPNINID------GGLLEITNASFADAGEYECVVKS 163 (626)
Q Consensus 127 -~~---~~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n 163 (626)
.. .......++... ...|.|.+++.+|+|.|+|.|.+
T Consensus 173 ~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 173 ANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp TTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred cCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 00 000011233332 24799999999999999999985
No 239
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.82 E-value=1e-19 Score=166.76 Aligned_cols=172 Identities=15% Similarity=0.208 Sum_probs=113.1
Q ss_pred CCCCceEEEEeeeCCCCCCe-----eEEEeCCEEcc--------CCCcEEEc-------------cCCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-----FVWKKDGNIIG--------SGGRRKIF-------------ENGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-----i~W~~~~~~i~--------~~~~~~~~-------------~~g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+.|.|.+. |.|+|++.... .+.+.... .+.+|.|.+++.+|+
T Consensus 15 v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~ 94 (248)
T 3pv7_A 15 TPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEA 94 (248)
T ss_dssp EETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGGC
T ss_pred EeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHHC
Confidence 46899999999999988876 99999643211 01111111 123599999999999
Q ss_pred EEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEecccc------
Q psy12061 56 GIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMD------ 128 (626)
Q Consensus 56 G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~~~------ 128 (626)
|.|+|.|.|..+.....+.|.|..+|.+...+. ..+..|+.++|.|.+.+ .|.| +.+.|+++|..+....
T Consensus 95 G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~p-i~v~W~k~g~~l~~~~~~~~~~ 171 (248)
T 3pv7_A 95 GEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEA-INITWEKQTQKFPHPIEISEDV 171 (248)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSC-CEEEEEEECSSSCSCEEECTTE
T ss_pred eEEEEEEEeCCccceeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCC-eEEEEEECCccCCCccccccce
Confidence 999999999988878888999988887655433 34556888889999999 6765 4679999996443110
Q ss_pred ----CCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc--eEEEEEEEEe
Q psy12061 129 ----LNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGK--ISTKTTVIVE 177 (626)
Q Consensus 129 ----~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~--~~~~~~l~v~ 177 (626)
........+ .....|.|......|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 172 ~~~~~~~~~~~~~-~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 172 ITGPTIKNMDGTF-NVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp EEEEEEECTTSCE-EEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred eecccEECCCCCE-EEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 000001111 12346888888999999999999999886 4556666663
No 240
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.81 E-value=3.9e-20 Score=166.26 Aligned_cols=169 Identities=15% Similarity=0.250 Sum_probs=118.3
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EE---c----------------cCCCcEEEccC-----CcEEEccCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I----------------GSGGRRKIFEN-----GNLLISPVSRD 53 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---i----------------~~~~~~~~~~~-----g~L~i~~v~~~ 53 (626)
|.+|++++|.|.+.+.| .+.|.|+|++ .. + ...+|+.+..+ .+|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 91 (222)
T 1q9r_B 12 VQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAE 91 (222)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCCcc
Confidence 57899999999999876 6799999842 21 1 01357777643 37999999999
Q ss_pred CCEEEEEEEEcCCC-----CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEE
Q psy12061 54 DSGIYSCTATNVHG-----MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVR 123 (626)
Q Consensus 54 d~G~Y~C~a~n~~g-----~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~ 123 (626)
|+|.|.|.|.|..+ .....+.|.|.. +|.+...++. ..+..|+.++|.|.+.+. |.| +.+.|+++|..
T Consensus 92 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~ 169 (222)
T 1q9r_B 92 DSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEP-VTVTWNSGSLS 169 (222)
T ss_dssp GCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC-SCCCCSSEEEEEEEEEEEBSSC-CEEEEGGGTBC
T ss_pred cCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc-ccccCCCcEEEEEEEccEECCC-CEEEEecCCeE
Confidence 99999999999765 223456787764 3444443332 235689999999999986 665 46799999977
Q ss_pred eccccCCc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEE
Q psy12061 124 IGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 124 ~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l 174 (626)
+....... ...+.+ ...+.|.|.++...| |.|+|.|.|..|.......+
T Consensus 170 ~~~~~~~~~~~~~~~-~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 170 SGVHTFPAVLQSDLY-TLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp TTEEEEEEEEETTEE-EEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred cceEeccccccCCcE-EEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 54311000 001111 123478999999899 99999999999976554443
No 241
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.81 E-value=3e-19 Score=164.46 Aligned_cols=181 Identities=17% Similarity=0.228 Sum_probs=120.7
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--E---Ec-------------cCCCcEEEccCC-----cEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--N---II-------------GSGGRRKIFENG-----NLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~---~i-------------~~~~~~~~~~~g-----~L~i~~v~~~d~G 56 (626)
|.+|++|+|.|.+.+. |.+.|.|+|.. . .+ ...+|+.+..++ +|.|.+++.+|+|
T Consensus 20 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 99 (257)
T 3gkz_A 20 VKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSEDTA 99 (257)
T ss_dssp ECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhhCE
Confidence 5789999999999884 57899999832 1 11 123567766433 5999999999999
Q ss_pred EEEEEEEcCCCC----ceeeEEEEEEeC-------------CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee
Q psy12061 57 IYSCTATNVHGM----DESKGRLIVLHG-------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119 (626)
Q Consensus 57 ~Y~C~a~n~~g~----~~~~~~l~v~~~-------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 119 (626)
.|.|.|.|..+. ....+.|.|..+ +..+...|....+.+|++++|.|.+.+.+.+ ..+.|+|
T Consensus 100 ~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~v~W~k 178 (257)
T 3gkz_A 100 TYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSS-SHLYWYQ 178 (257)
T ss_dssp EEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCG-GGEEEEE
T ss_pred EEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccc-eEEEEEE
Confidence 999999997322 234567777654 3445556778999999999999999998765 2568998
Q ss_pred C--CEEeccc----c-CCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCc-eEEEEEEEEeCCCCCC
Q psy12061 120 N--GVRIGNM----D-LNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPPGLP 183 (626)
Q Consensus 120 ~--~~~~~~~----~-~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~-~~~~~~l~v~~~P~~p 183 (626)
+ +..+... . .......++.. ....|.|.+++.+|+|.|+|.|.+.... ......|.|...|..|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~~~~ 254 (257)
T 3gkz_A 179 QKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTKLEIKRAPHHH 254 (257)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCC----
T ss_pred ECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEEEEEEeCCCCC
Confidence 3 3322100 0 00000122222 2236999999999999999999875543 2445677777655444
No 242
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=3.3e-20 Score=168.47 Aligned_cols=170 Identities=18% Similarity=0.205 Sum_probs=117.4
Q ss_pred CCCCceEEEEeeeCCCC-CC-eeEEEeCC--EEc------------cCCCcEEEccC---CcEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-KP-KFVWKKDG--NII------------GSGGRRKIFEN---GNLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-~p-~i~W~~~~--~~i------------~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a 62 (626)
+.+|++++|.|.+.|.+ .+ .|.|+|++ ..+ ...+|+.+..+ .+|.|.+++.+|+|.|+|.|
T Consensus 31 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 110 (234)
T 2j6e_L 31 GTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAT 110 (234)
T ss_dssp BCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEEE
T ss_pred eeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEEE
Confidence 67999999999999864 34 79999963 222 11356665432 37999999999999999999
Q ss_pred EcCCCC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc---c
Q psy12061 63 TNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---L 132 (626)
Q Consensus 63 ~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~---~ 132 (626)
.|..+. ....+.|.|.. +|.+...++.. .+..|++++|.|.+.+.+++.+++.|+|||..+....... .
T Consensus 111 ~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 189 (234)
T 2j6e_L 111 WDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSS-EELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSK 189 (234)
T ss_dssp EETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCH-HHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCC
T ss_pred EcCCcceeEecCCEEEEEecCCCCCCcccccCCCh-hHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceE
Confidence 998872 22345666632 44443333332 2346899999999998765546789999999986431000 0
Q ss_pred CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 133 ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 133 ~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
.........+.|.|.++..+|+|.|+|.|.|..+..+.++
T Consensus 190 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 190 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp CTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 0000111234789999999999999999999987755444
No 243
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.81 E-value=1.7e-19 Score=165.90 Aligned_cols=177 Identities=16% Similarity=0.249 Sum_probs=122.1
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEE---c--------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I--------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~---i--------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.|.| .+.|.|+|. +.. + ...+|+.+..++ +|.|.+++.+|+
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 93 (256)
T 3umt_A 14 VKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSEDS 93 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCcccC
Confidence 57899999999999876 679999983 221 1 023566666443 399999999999
Q ss_pred EEEEEEEEcC----CCCceeeEEEEEEeC---------------CceeeeCCCceEEecCCcEEEEEEecccCCcceeEE
Q psy12061 56 GIYSCTATNV----HGMDESKGRLIVLHG---------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116 (626)
Q Consensus 56 G~Y~C~a~n~----~g~~~~~~~l~v~~~---------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 116 (626)
|.|.|.|.|. .+.....+.|.|... +..+...|....+.+|++++|.|.+.+.+.+ .+.
T Consensus 94 G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~--~v~ 171 (256)
T 3umt_A 94 AVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGS--NLN 171 (256)
T ss_dssp EEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTT--CEE
T ss_pred EEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCc--EEE
Confidence 9999999987 333445578888652 4445556788999999999999999998876 568
Q ss_pred EeeC--CEEec---c-c-cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCC
Q psy12061 117 WTHN--GVRIG---N-M-DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPP 180 (626)
Q Consensus 117 W~~~--~~~~~---~-~-~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P 180 (626)
|+|+ +..+. . . ........|+.. ....|.|.+++.+|+|.|+|.+.|..+.. .....|.|..++
T Consensus 172 W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 172 WLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp EEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 9984 22221 0 0 000000123322 22369999999999999999999865433 446677777554
No 244
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=7.7e-21 Score=169.66 Aligned_cols=165 Identities=21% Similarity=0.254 Sum_probs=116.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEcc------------CCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNIIG------------SGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i~------------~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
+.+|++++|.|.+.+.|.+.|.|+|+ |..+. ..+|+.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 11 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 90 (212)
T 1nfd_E 11 VTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSSY 90 (212)
T ss_dssp EETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEE
T ss_pred EeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEEc
Confidence 56899999999999988889999984 33321 13566665432 799999999999999999997
Q ss_pred CCCCc---eeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc----cC
Q psy12061 65 VHGMD---ESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE----LE 133 (626)
Q Consensus 65 ~~g~~---~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~----~~ 133 (626)
..+.. ...+.|.|.. +|.+... +....+..|++++|.|.+.+.+++.+.+.|+|||..+....... ..
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~~p~v~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 169 (212)
T 1nfd_E 91 GDNNDLVFGSGTQLTVLRGPKSSPKVTVF-PPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQG 169 (212)
T ss_dssp TTTTEEEECCCEEEEEECCCCBCCEEECC-CCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSS
T ss_pred ccCcccccCCceEEEEccCCCCCCEEEee-CCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecC
Confidence 43321 2345677743 3433332 33333468999999999999754435779999999987542100 00
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceE
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~ 169 (626)
.. +. ..+.|.|.++..+|+|.|+|.|.|..+..+
T Consensus 170 ~~-~~-~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 170 QN-YM-TSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp SC-EE-EEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred CC-ce-EEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 11 11 225699999999999999999999987643
No 245
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.81 E-value=9.4e-19 Score=175.98 Aligned_cols=172 Identities=14% Similarity=0.241 Sum_probs=119.5
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEE---c--------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I--------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~---i--------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+.+.| .+.|.|+|+ |.. + ...+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (457)
T 1hzh_H 12 KKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADT 91 (457)
T ss_dssp ECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcccC
Confidence 57899999999999886 679999983 321 1 01367777643 2699999999999
Q ss_pred EEEEEEEEcCCC------------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee
Q psy12061 56 GIYSCTATNVHG------------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119 (626)
Q Consensus 56 G~Y~C~a~n~~g------------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 119 (626)
|.|+|.|.|..| .....+.|.|.. +|.+...++ ...+.+|++++|.|.+.+..+..+.+.|+|
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 170 (457)
T 1hzh_H 92 AVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (457)
T ss_dssp EEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECC-CSCCCTTCCEEEEEEEESBBSCCCEEEETT
T ss_pred EEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCc-cccccCCCcEEEEEEEeEEeCCCeEEEEEe
Confidence 999999999876 223456788865 454444333 334689999999999998732224679999
Q ss_pred CCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 120 NGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 120 ~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
++..+....... ...+++. ..+.|.|.++..+| |.|+|.|.|..+.......+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~ 227 (457)
T 1hzh_H 171 GALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEP 227 (457)
T ss_dssp TTBCTTEEEEEEEECTTSCEE-EEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred CCEeccceEcCceECCCCCEE-EEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecc
Confidence 996543111000 0011111 12479999999999 9999999998887655555443
No 246
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.81 E-value=9.3e-20 Score=174.68 Aligned_cols=160 Identities=13% Similarity=0.149 Sum_probs=109.9
Q ss_pred CCCCceEEEEeeeCCCCCC--eeEEEeCCEEccCCCcEEEcc--CC------cEEEccCCCCCCEEEEEEEEcCCCCc--
Q psy12061 2 AGEGGNVTIFCNPEAAPKP--KFVWKKDGNIIGSGGRRKIFE--NG------NLLISPVSRDDSGIYSCTATNVHGMD-- 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p--~i~W~~~~~~i~~~~~~~~~~--~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~-- 69 (626)
+.+|++++|.|.+.|.|+| .|.|+|||.+|....+..... ++ .|.|.....+|.|.|+|.|.|..+..
T Consensus 129 ~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~ 208 (327)
T 2wng_A 129 ATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDP 208 (327)
T ss_dssp BCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCC
T ss_pred cCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCc
Confidence 5789999999999998776 999999999997543322221 12 47788777788999999999988763
Q ss_pred -eeeEEE--EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC-----
Q psy12061 70 -ESKGRL--IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG----- 141 (626)
Q Consensus 70 -~~~~~l--~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~----- 141 (626)
...+.+ .+..+|.+...+. . +.+|++++|.|.+.+.+++.++|.|+|||..+..... .......+
T Consensus 209 ~~~~~~~~~~v~~~P~i~~~~~-~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~----~~~~~~~~g~~~~ 281 (327)
T 2wng_A 209 LRGTANLSETIRVPPTLEVTQQ-P--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETA----STVTENKDGTYNW 281 (327)
T ss_dssp EEEEEEGGGTBCBCCEEEEEEE-C--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEEC----CSCEECTTSCEEE
T ss_pred ccceEEeccccCCCCEEEEecC-C--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCccc----CceEECCCCcEEE
Confidence 223333 3344565544322 2 7799999999999997666667899999999865310 01111112
Q ss_pred -CeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 142 -GLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 142 -~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
..|.|.++..+|+|.|+|.|.|..|..
T Consensus 282 ~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 282 MSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEEC-------CCEEEEEEEETTCCC
T ss_pred EEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 358888999999999999999999865
No 247
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.5e-19 Score=164.42 Aligned_cols=170 Identities=18% Similarity=0.235 Sum_probs=117.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcE----EEccCCcEEEccCCCCCCEEEEEEEEcCCC-----Cceee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRR----KIFENGNLLISPVSRDDSGIYSCTATNVHG-----MDESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~----~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~ 72 (626)
|.+|++|+|.|.+.+ +.+.+.|+|+|..+....+. ....+++|.|.+++.+|+|.|+|.|.|..+ .....
T Consensus 18 V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~ 96 (257)
T 1b6u_A 18 VKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDP 96 (257)
T ss_dssp EESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCC
T ss_pred ecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCCC
Confidence 468999999999975 56799999998755321110 011245799999999999999999987532 22445
Q ss_pred EEEEEEeC---CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeec
Q psy12061 73 GRLIVLHG---PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 73 ~~l~v~~~---p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
+.|.|... |.+.. .|. ..+.+|++++|.|.+.+.+ ..+.|+|||..+........ ......+..|.|.++
T Consensus 97 ~~L~V~~~~~~P~l~~-~p~-~~V~~G~~vtL~C~~~~~~---~~~~w~k~g~~~~~~~~~~~--~~~~~~~~~l~I~~v 169 (257)
T 1b6u_A 97 LDIVITGLYEKPSLSA-QPG-PTVLAGESVTLSCSSRSSY---DMYHLSREGEAHERRFSAGP--KVNGTFQADFPLGPA 169 (257)
T ss_dssp EEEEEECSSCCCEEEC-SSC-TTCBTTCEEEEEEECSSCC---SEEEEEETTSSCEECCBCBC--CSSSCCBEEEEEEEC
T ss_pred EEEecccCCCCcceEc-cCC-CccCCCCEEEEEEeCCCCC---cEEEEEECCcccCccccccc--ccCCceeEEEEeccc
Confidence 67888753 33333 333 3678999999999998764 26799999987754321000 000012568999999
Q ss_pred CCCCCEeEEEEEEeCCC-----ceEEEEEEEEeCCCC
Q psy12061 150 SFADAGEYECVVKSTVG-----KISTKTTVIVEGPPG 181 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g-----~~~~~~~l~v~~~P~ 181 (626)
+ |+|.|+|.|.+..+ ..+..+.|.|.++|.
T Consensus 170 ~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 170 T--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp C--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred c--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 8 99999999997643 335667888887764
No 248
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.81 E-value=3.7e-18 Score=152.24 Aligned_cols=195 Identities=14% Similarity=0.126 Sum_probs=138.9
Q ss_pred CCCCCCceeEeecC-CcCeEEEEEeeCCCCCcccCcceEEEEEEecCCC------cceeeeeeeecceeeEEEEeCCCcc
Q psy12061 286 KPYQAPSRIGGGGG-KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT------EFQSETLKEYGNVGIAVVRIPSEFY 358 (626)
Q Consensus 286 ~p~~~p~~~~~~~~-~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~L~p 358 (626)
.|+.+|.++..... ...++.|+|++ +.+.+. ...|.|+|+..+.. .+.... .........+.+.+|.+
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p--~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~ 77 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEP--GPETHL-PTSFILKSFRSRADCQYQGDTIPDCV--AKKRQNNCSIPRKNLLL 77 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEEC--CSCCSS-CCEEEEEEEECCGGGCSCCCEEEEEE--CCTTCCEEEEEGGGCCT
T ss_pred CCCCCCeeeeeecCCCcccEEEEecC--CCCCCC-ceeEEEEEEecCCcccccccccccCC--CCCCCcEEEECCccccc
Confidence 45678999988765 57899999998 334333 45799999875421 121111 11223456778889999
Q ss_pred eeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEee------ecceEEEEeeeccccccccceeeEEEEEEE
Q psy12061 359 YTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF------NSTAINVTWNPIELIRENIRGRLIGHRIKY 432 (626)
Q Consensus 359 ~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~------~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~ 432 (626)
++.|.|+|.|.|..|.+. +....+.+...+++.+|.++.+... +.+++.|+|++|...+ ..+.+|.|+|
T Consensus 78 ~~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~----~~~l~Y~v~y 152 (215)
T 1cd9_B 78 YQYMAIWVQAENMLGSSE-SPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSE----YMEQECELRY 152 (215)
T ss_dssp TSCEEEEEEEEETTEEEE-CCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGGGT----TSCEEEEEEE
T ss_pred ceEEEEEEEEECCCCCcc-CccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCC----eEEEEEEEEE
Confidence 999999999999999764 5556666666566669999888766 6788999999887422 2247999999
Q ss_pred E-ecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCC---CCCccEEEeecCC
Q psy12061 433 W-KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEG---PESERYLERTYRK 491 (626)
Q Consensus 433 ~-~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s---~~s~~~~~~t~~~ 491 (626)
+ ..+...+.... ........+.+.+|+|++.|.|+|+|.+..|.| ++|..+.++|.++
T Consensus 153 ~~~~~~~~w~~~~-~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e~ 214 (215)
T 1cd9_B 153 QPQLKGANWTLVF-HLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTMK 214 (215)
T ss_dssp EESSTTCCCEEEE-EEESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC-
T ss_pred ccCCCCCCcEEEe-cccCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCCC
Confidence 8 55544443222 223345669999999999999999999986654 6788888888754
No 249
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.80 E-value=2.7e-19 Score=162.87 Aligned_cols=162 Identities=18% Similarity=0.282 Sum_probs=112.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--E---Ec---------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--N---II---------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~i---------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
|.+|++|+|.|.+.+.|.+.|.|+|+. . .+ ...+|+.+..++ +|.|.+++.+|+|.|.|.|.|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 92 (242)
T 2znx_A 13 VTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSN 92 (242)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred EcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEec
Confidence 579999999999999999999999943 1 11 124566665332 699999999999999999999
Q ss_pred CCCCc-eeeEEEEEEeCCc-------------eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC--CEEec---
Q psy12061 65 VHGMD-ESKGRLIVLHGPS-------------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN--GVRIG--- 125 (626)
Q Consensus 65 ~~g~~-~~~~~l~v~~~p~-------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~--~~~~~--- 125 (626)
..+.. ...+.|.|..+|. .+.. +....+.+|++++|.|.+.+.|.+...+.|+|+ +..+.
T Consensus 93 ~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~ 171 (242)
T 2znx_A 93 SXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQE-SGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMG 171 (242)
T ss_dssp SSSCEECCCEEEEEC---------------CCEEEE-ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE
T ss_pred CCceEECCCEEEEEcCCCCCCcccccccccceeeec-CCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEE
Confidence 86542 2446788866552 3333 334569999999999999988744456799985 33221
Q ss_pred ---cccC---CccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeC
Q psy12061 126 ---NMDL---NELETPNINID------GGLLEITNASFADAGEYECVVKST 164 (626)
Q Consensus 126 ---~~~~---~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~ 164 (626)
.... ......++... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 172 ~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 172 YVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 0000 00012344432 248999999999999999999873
No 250
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.80 E-value=2.6e-19 Score=164.52 Aligned_cols=174 Identities=16% Similarity=0.191 Sum_probs=118.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EE---c----------cCCCcEEEc-----cCCcEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I----------GSGGRRKIF-----ENGNLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---i----------~~~~~~~~~-----~~g~L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++|+|.|.+.+.|.+.|.|+|.. .. + ...+|+.+. .+.+|.|.+++.+|+|.|.|.
T Consensus 15 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~ 94 (256)
T 3tf7_C 15 VSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFCA 94 (256)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEEE
T ss_pred ecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEEE
Confidence 568999999999999999999999832 11 1 113455552 123699999999999999999
Q ss_pred EEcCCCC----ceeeEEEEEEe-------------------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEe
Q psy12061 62 ATNVHGM----DESKGRLIVLH-------------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118 (626)
Q Consensus 62 a~n~~g~----~~~~~~l~v~~-------------------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 118 (626)
|.|..+. ....+.|.|.. .+..+...|....+.+|++++|.|.+.+. .+ .+.|+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~--~v~W~ 171 (256)
T 3tf7_C 95 VSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HN--YMYWY 171 (256)
T ss_dssp EECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CS--EEEEE
T ss_pred EecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ce--EEEEE
Confidence 9997653 22346777765 23445567888899999999999999887 34 56899
Q ss_pred eCC--EEecccc------C--CccCCCeeEe-----cCCeEEEeecCCCCCEeEEEEEEeCCCceE--EEEEEEEeC
Q psy12061 119 HNG--VRIGNMD------L--NELETPNINI-----DGGLLEITNASFADAGEYECVVKSTVGKIS--TKTTVIVEG 178 (626)
Q Consensus 119 ~~~--~~~~~~~------~--~~~~~~~~~~-----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~--~~~~l~v~~ 178 (626)
|.. ....... . ......++.. ....|.|.+++.+|+|.|+|.|.|..|... ....|.|..
T Consensus 172 k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 172 RQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp EECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 832 1111000 0 0000112221 234799999999999999999999877542 234555543
No 251
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.80 E-value=4e-19 Score=158.71 Aligned_cols=167 Identities=17% Similarity=0.258 Sum_probs=113.4
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EE---c-------------cCCCcEEEccCC---cEEEccCCCCCCEEE
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---I-------------GSGGRRKIFENG---NLLISPVSRDDSGIY 58 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~---i-------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y 58 (626)
|.+|++|+|.|.+.+. +.+.|.|+|.. .. + ...+|+.+..++ +|.|.+++.+|+|.|
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 90 (215)
T 3nl4_H 11 VTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTATY 90 (215)
T ss_dssp ECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEEE
T ss_pred EcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEEE
Confidence 5789999999999874 46799999732 11 1 113566665443 499999999999999
Q ss_pred EEEEEcCCCC----ceeeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCC
Q psy12061 59 SCTATNVHGM----DESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLN 130 (626)
Q Consensus 59 ~C~a~n~~g~----~~~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~ 130 (626)
.|.+.|..+. ....+.|.|. .+|.+...++. ..+..|+.++|.|.+.+.+++.+.+.|+++|..+....
T Consensus 91 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~-- 167 (215)
T 3nl4_H 91 FCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPC-CGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRT-- 167 (215)
T ss_dssp EEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCC-TTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE--
T ss_pred EEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCC-ccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEe--
Confidence 9999988653 3344678776 35555433333 35568999999999999776667789999997554321
Q ss_pred ccCCCeeEecCCeEEE---eecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 131 ELETPNINIDGGLLEI---TNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 131 ~~~~~~~~~~~~~l~i---~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
.......++.+.+ ..+...| |.|+|.|.|..|.......|.
T Consensus 168 ---~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 168 ---FPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp ---CCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred ---cCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 1122223455555 5577778 999999999998776665554
No 252
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=4e-19 Score=165.72 Aligned_cols=176 Identities=17% Similarity=0.279 Sum_probs=122.1
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc-----------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-----------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.|.| .+.|.|+|++ ..+ ...+|+.+..+ ++|.|.+++.+|+
T Consensus 38 v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 117 (282)
T 1qok_A 38 VRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSEDT 117 (282)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhhC
Confidence 56899999999999885 5899999953 111 01357766542 3699999999999
Q ss_pred EEEEEEEEcCCCC-----ceeeEEEEEEeCC--------------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEE
Q psy12061 56 GIYSCTATNVHGM-----DESKGRLIVLHGP--------------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116 (626)
Q Consensus 56 G~Y~C~a~n~~g~-----~~~~~~l~v~~~p--------------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 116 (626)
|.|.|.|.|..|. ....+.|.|...| ..+..+|....+.+|++++|.|.+.+.+ + .+.
T Consensus 118 G~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~--~v~ 194 (282)
T 1qok_A 118 AVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-S--YMH 194 (282)
T ss_dssp EEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-S--CCE
T ss_pred EEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-c--eEE
Confidence 9999999998762 1234678887653 3344557788899999999999999988 5 558
Q ss_pred Eee--CCEEeccc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCc-eEEEEEEEEeCCC
Q psy12061 117 WTH--NGVRIGNM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGK-ISTKTTVIVEGPP 180 (626)
Q Consensus 117 W~~--~~~~~~~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~-~~~~~~l~v~~~P 180 (626)
|+| +|..+..- ........++.. ....|.|.+++.+|+|.|+|.|.|..+. ......|.|....
T Consensus 195 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 270 (282)
T 1qok_A 195 WFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKRAA 270 (282)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEeccc
Confidence 999 56544210 000000123322 2347999999999999999999876442 3455677776433
No 253
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.80 E-value=8e-19 Score=160.60 Aligned_cols=162 Identities=18% Similarity=0.244 Sum_probs=112.4
Q ss_pred CCCCceEEEEeeeCCCC-----CCeeEEEeCC--EE---cc---------CCCcEEEccCC---cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-----KPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~~---i~---------~~~~~~~~~~g---~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++|+|.|.+.+.| .+.|.|+|++ .. +. ..+|+.+..++ +|.|.+++.+|+|.|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 92 (247)
T 1svz_A 13 VSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYY 92 (247)
T ss_dssp ECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEEE
Confidence 57899999999999988 6899999842 21 11 13566665333 6999999999999999
Q ss_pred EEEEcCCCC-ceeeEEEEEEeCC------------c-eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCC--EE
Q psy12061 60 CTATNVHGM-DESKGRLIVLHGP------------S-YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VR 123 (626)
Q Consensus 60 C~a~n~~g~-~~~~~~l~v~~~p------------~-~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~--~~ 123 (626)
|.|.|..+. ....+.|.|..++ . .+.. +....+.+|++++|.|.+.+.+.+...+.|+|++ ..
T Consensus 93 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~ 171 (247)
T 1svz_A 93 CFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQ-SGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGD 171 (247)
T ss_dssp EEECSSSSCEECCCEEEEEC---------------CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCC
T ss_pred EEEccCCccEECCCEEEEEECCccccccccccccCceEEeC-CCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCC
Confidence 999998664 2334678886642 2 3333 3445699999999999999886444567999863 21
Q ss_pred ec------ccc----CCccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeC
Q psy12061 124 IG------NMD----LNELETPNINID------GGLLEITNASFADAGEYECVVKST 164 (626)
Q Consensus 124 ~~------~~~----~~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~ 164 (626)
+. ... .......++... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 172 LKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred cEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 11 000 000002333332 248999999999999999999985
No 254
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.80 E-value=1e-18 Score=160.90 Aligned_cols=163 Identities=18% Similarity=0.249 Sum_probs=111.6
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTA 62 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a 62 (626)
|.+|++|+|.|.+.+. |.+.+.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|.|.|
T Consensus 14 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 93 (256)
T 3ux9_B 14 GAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYCQV 93 (256)
T ss_dssp ECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred EcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEEEE
Confidence 5789999999999987 78899999842 111 023566665443 6999999999999999999
Q ss_pred EcCCCC---ceeeEEEEEEeCCc--------------------eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee
Q psy12061 63 TNVHGM---DESKGRLIVLHGPS--------------------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119 (626)
Q Consensus 63 ~n~~g~---~~~~~~l~v~~~p~--------------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 119 (626)
.|..+. ....+.|.|..+|. .+.. +....+.+|++++|.|.+.+.+.+...+.|+|
T Consensus 94 ~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 172 (256)
T 3ux9_B 94 RDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTFSSYAMSWVR 172 (256)
T ss_dssp EETTTTEEEECCCEEEEEC----------------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEEEEEE
T ss_pred EECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEc-CCCeEEcCCCeEEEEEEEeCCcccccEEEEEE
Confidence 997653 23446788866542 2333 34556999999999999998774445779998
Q ss_pred C--CEEeccc-cCC---------ccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeCC
Q psy12061 120 N--GVRIGNM-DLN---------ELETPNINID------GGLLEITNASFADAGEYECVVKSTV 165 (626)
Q Consensus 120 ~--~~~~~~~-~~~---------~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~~ 165 (626)
+ +..+... .+. .....|+.+. ...|.|.+++.+|+|.|+|.|.|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 173 QAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp ECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred ECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 6 3322110 000 0001233321 2359999999999999999999864
No 255
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.80 E-value=1.3e-20 Score=170.88 Aligned_cols=164 Identities=15% Similarity=0.187 Sum_probs=95.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EEc------------cCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NII------------GSGGRRKIFENG---NLLISPVSRDDSGIYSCTATN 64 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~i------------~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n 64 (626)
+.+|++++|.|.+.+.|.+.|.|+|++ ..+ ...+|+.+..++ +|.|.+++.+|+|.|.|.|.|
T Consensus 35 v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 114 (233)
T 3bqu_C 35 MSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSD 114 (233)
T ss_dssp ------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEECS
T ss_pred EecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEEec
Confidence 678999999999999888899999853 211 112344433222 699999999999999999998
Q ss_pred CCCCce-eeEEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-c----CCccCCC
Q psy12061 65 VHGMDE-SKGRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-D----LNELETP 135 (626)
Q Consensus 65 ~~g~~~-~~~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-~----~~~~~~~ 135 (626)
..+... ....|.|.. +|.+...++.. .+..|++++|.|.+.+.+++.+++.|+|||..+... . .......
T Consensus 115 ~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~-~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 193 (233)
T 3bqu_C 115 NLPYTFGGGTNLEIKRADAAPTVSIFPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 193 (233)
T ss_dssp SSSCCBCCCCBC---CCCBCCEEEEECCCH-HHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTC
T ss_pred CCceeecCCEEEEEeCCCCCCEEEEeCCCH-HhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCC
Confidence 876432 234666654 44444333332 234799999999999966544678999999987643 1 0000011
Q ss_pred eeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 136 NINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 136 ~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.+ ...+.|.|..+..+|+|.|+|.|.|....
T Consensus 194 ~~-~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 194 TY-SMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp CE-EEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CE-EEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 11 12347899999999999999999997553
No 256
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.79 E-value=5.8e-20 Score=162.74 Aligned_cols=161 Identities=16% Similarity=0.185 Sum_probs=109.1
Q ss_pred CCCCceEEEEeeeCCCC---C-CeeEEEeCCEEccCCCc---EE-----EccCCcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAAP---K-PKFVWKKDGNIIGSGGR---RK-----IFENGNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p---~-p~i~W~~~~~~i~~~~~---~~-----~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|.+.|.| . +.|.|+|++..+..... .. ....++|.|.+++.+|+|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 46899999999999884 3 49999999987742210 00 1112369999999999999999999988864
Q ss_pred eeeEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCC---
Q psy12061 70 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG--- 142 (626)
Q Consensus 70 ~~~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~--- 142 (626)
.....+ .+..+|.+...++... ...|+.++|.|.+.+.+++.+++.|+|||..+...... ......++
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~----~~~~~~~g~~~ 169 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNT----QPIMDTDGSYF 169 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEEC----CCEECTTSCEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccC----CceECCCCCEE
Confidence 332333 3344666544433322 23599999999999965555678999999987543100 00111223
Q ss_pred ---eEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 143 ---LLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 143 ---~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.|.|......|.|.|+|.|.|....
T Consensus 170 ~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 170 VYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 3555555556899999999997653
No 257
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.79 E-value=3.4e-19 Score=159.89 Aligned_cols=168 Identities=17% Similarity=0.299 Sum_probs=117.2
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EE---c---cC-------------CCcEEEccC---C--cEEEccCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I---GS-------------GGRRKIFEN---G--NLLISPVSRD 53 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---i---~~-------------~~~~~~~~~---g--~L~i~~v~~~ 53 (626)
+.+|++++|.|.+.+.| .+.|.|+|++ .. + .. .+|+.+..+ + +|.|.+++.+
T Consensus 12 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 91 (220)
T 1pz5_B 12 VQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRAE 91 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCHH
Confidence 57899999999999876 6899999953 21 1 00 357776532 2 7999999999
Q ss_pred CCEEEEEEEEcCCCCc-e--eeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEec
Q psy12061 54 DSGIYSCTATNVHGMD-E--SKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIG 125 (626)
Q Consensus 54 d~G~Y~C~a~n~~g~~-~--~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~ 125 (626)
|+|.|.|.+.|..+.. . ..+.|.|.. +|.+...++ ...+.+|+.++|.|.+.+. |.| +++.|++++....
T Consensus 92 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~~~~ 169 (220)
T 1pz5_B 92 DTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVP-GCSDTSGSSVTLGCLVKGYFPEP-VTVKWNYGALSSG 169 (220)
T ss_dssp GCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECC-CSCCSCSSSEEEEEEEEEEBSSC-CEEEEGGGTCCTT
T ss_pred HCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEccc-ccccCCCCcEEEEEEEEEEeCCC-eEEEEecCCcccc
Confidence 9999999999976532 2 456787763 344444333 2345789999999999997 665 4679999887421
Q ss_pred cccCCcc-CCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEE
Q psy12061 126 NMDLNEL-ETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173 (626)
Q Consensus 126 ~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~ 173 (626)
....... ....+ ...+.|.|.++...| |.|+|.|.|..|..+..+.
T Consensus 170 ~~~~~~~~~~~~~-~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 170 VRTVSSVLQSGFY-SLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp EEECCCEEETTEE-EEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred eEEcCCcccCCeE-EEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 0000000 01122 134678999988766 9999999999997666554
No 258
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.79 E-value=4.9e-19 Score=164.18 Aligned_cols=164 Identities=20% Similarity=0.274 Sum_probs=117.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe--CCEE------------ccC----CCcEEEcc----CCcEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK--DGNI------------IGS----GGRRKIFE----NGNLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~------------i~~----~~~~~~~~----~g~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++|+|.|.+. .+.+.|.|+| .+.. ... ++|+.+.. +++|.|.+++.+|+|.|.
T Consensus 38 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 116 (268)
T 3pl6_D 38 TEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVYL 116 (268)
T ss_dssp EETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEEE
T ss_pred ecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEEE
Confidence 56899999999987 5778999999 2221 111 16777765 346999999999999999
Q ss_pred EEEEcC--CCCceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 60 CTATNV--HGMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 60 C~a~n~--~g~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
|.+.|. .+.......|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|+|||..+.......
T Consensus 117 C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~ 196 (268)
T 3pl6_D 117 CATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTD 196 (268)
T ss_dssp EEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEEC
T ss_pred EEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEec
Confidence 999984 33344556788875 4555555556666677999999999999776656889999999986531100
Q ss_pred ---------cCCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCc
Q psy12061 132 ---------LETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 167 (626)
Q Consensus 132 ---------~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~ 167 (626)
.....+. ..+.|.|......| .|.|+|.|.|....
T Consensus 197 ~~~~~~~~~~~~~~~~-~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 197 PQPLKEQPALNDSRYS-LSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp SSCEESSTTCTTCCEE-EEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred cccccccccCCCCcEE-EEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 0111111 22467888877777 99999999987654
No 259
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.79 E-value=7.5e-19 Score=160.61 Aligned_cols=164 Identities=20% Similarity=0.272 Sum_probs=117.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe--------------CCEEccC----CCcEEEccCC----cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK--------------DGNIIGS----GGRRKIFENG----NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~--------------~~~~i~~----~~~~~~~~~g----~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++++|.| ..+.|.+.|.|+| ++..+.. .+|+.+..++ +|.|.+++.+|+|.|.
T Consensus 14 v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 92 (245)
T 4ei6_B 14 IDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVYF 92 (245)
T ss_dssp EETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEEE
T ss_pred ecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEEE
Confidence 56899999999 6678889999998 3332221 1677776532 6999999999999999
Q ss_pred EEEEcCC----CCceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC
Q psy12061 60 CTATNVH----GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 60 C~a~n~~----g~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 129 (626)
|.|.+.. +.....+.|.|.. +|.+....|....+..|+.++|.|.+.+.+++.+.+.|++||..+.....
T Consensus 93 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~ 172 (245)
T 4ei6_B 93 CASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVC 172 (245)
T ss_dssp EEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred EEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcc
Confidence 9999632 2334456788873 55555555666666779999999999995554467899999999875321
Q ss_pred Ccc---------CCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCc
Q psy12061 130 NEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 167 (626)
Q Consensus 130 ~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~ 167 (626)
... ....+. ....|.|......| .|.|+|.|.|....
T Consensus 173 ~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 173 TDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp ECSSCEESSTTSTTCCEE-EEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred cccccccccccCCCCCEE-EEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 000 011111 12358888887778 99999999987554
No 260
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.79 E-value=4.3e-19 Score=162.20 Aligned_cols=166 Identities=17% Similarity=0.200 Sum_probs=116.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEEc--------------cCCCcEEEccC----CcEEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNII--------------GSGGRRKIFEN----GNLLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~i--------------~~~~~~~~~~~----g~L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++|+|.|.+.+.|.+.|.|+|. +..+ ...+|+.+..+ .+|.|.+++.+|+|.|.|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 92 (245)
T 3nfj_J 13 QPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLCA 92 (245)
T ss_dssp EETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred ecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEEE
Confidence 56899999999999999999999992 2110 11245555532 2699999999999999999
Q ss_pred EEcCCC------CceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC
Q psy12061 62 ATNVHG------MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 62 a~n~~g------~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 129 (626)
|.|..| .....+.|.|.. +|.+...++....+..|+.++|.|.+.+.+++.+.+.|++||..+.....
T Consensus 93 ~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 172 (245)
T 3nfj_J 93 WSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVC 172 (245)
T ss_dssp EECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred EeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcc
Confidence 999333 223446788875 45554444555556679999999999996555678899999999875321
Q ss_pred Ccc---------CCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCce
Q psy12061 130 NEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKI 168 (626)
Q Consensus 130 ~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~~ 168 (626)
... ....+. ..+.|.|......| .|.|+|.|.|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 173 TDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp ECSSCEESSSSSTTCCEE-EEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred cccccccccccCCCCCEE-EEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 000 011111 22468888887777 679999999876544
No 261
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.79 E-value=3.5e-19 Score=160.12 Aligned_cols=163 Identities=15% Similarity=0.259 Sum_probs=113.9
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc-----------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-----------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
+.+|++|+|.|.+.|.| .+.|.|+|+. ..+ ...+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~ 91 (225)
T 1op3_H 12 VKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDT 91 (225)
T ss_dssp EETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChhhC
Confidence 56899999999999887 6899999842 211 02357777642 3799999999999
Q ss_pred EEEEEEEEcCCC-----C---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCE
Q psy12061 56 GIYSCTATNVHG-----M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGV 122 (626)
Q Consensus 56 G~Y~C~a~n~~g-----~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~ 122 (626)
|.|.|.+.|..| . ....+.|.|.. +|.+....|.. .+..|+.++|.|.+.+. |.| +.+.|++++.
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~~ 169 (225)
T 1op3_H 92 AIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEP-VTVSWNSGAL 169 (225)
T ss_dssp EEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCCCEEEEEEEEEEEBSSC-CEEECCTTSC
T ss_pred EEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCCCcEEEEEEEEeEECCC-eEEEEecCCC
Confidence 999999999865 2 12356888875 34444433333 25689999999999987 543 5789999987
Q ss_pred EeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 123 RIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 123 ~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+....... ...+.+. ..+.|.|.++...| |.|+|.|.|..+..
T Consensus 170 ~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 170 TSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp CTTCEECCCEECTTSCEE-EEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred cCCeEecCceeCCCCCEE-EEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 642111000 0011111 23468999998888 99999999977653
No 262
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.79 E-value=4.4e-18 Score=166.13 Aligned_cols=271 Identities=14% Similarity=0.139 Sum_probs=181.1
Q ss_pred eCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCC--CCEeEEEEEEe
Q psy12061 86 QLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFA--DAGEYECVVKS 163 (626)
Q Consensus 86 ~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~--d~g~Y~C~a~n 163 (626)
..|++..+..|+++++.|..... . .....++..... .+.......++|.|+... ....|.|...
T Consensus 203 ifP~~~vv~~GS~vt~~Ci~~~~----~-~~~~l~~~~~~~--------~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~- 268 (483)
T 3e0g_A 203 VFPQDKVILVGSDITFCCVSQEK----V-LSALIGHTNCPL--------IHLDGENVAIKIRNISVSASSGTNVVFTTE- 268 (483)
T ss_dssp EESCSEEEETTCCEEEEECCSSC----E-EEEESSSCCBCC--------EECSSSCEEEEECSCCCCCSSCEEEEEEES-
T ss_pred EeccCCEEeCCCCEEEEEEeCcc----c-cceecCccccee--------EEecCCEEEEEEeCCCCccCccceEEEecC-
Confidence 34778889999999999988732 1 122222222111 011113446677777653 2347999852
Q ss_pred CCCceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCC---CcccEEEEEEeecCCCCceEeecceeeeeeecc
Q psy12061 164 TVGKISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNG---RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRY 240 (626)
Q Consensus 164 ~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~---~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~ 240 (626)
.....+.|.+..||.+|.++.|......++.++|+++.+.+ ...+.|.|.++..+.. ........ ..
T Consensus 269 ---~~~~g~~l~vg~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~--~~C~~~~~-----~~ 338 (483)
T 3e0g_A 269 ---DNIFGTVIFAGYPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKY--VRLKRAEA-----PT 338 (483)
T ss_dssp ---SCEEEEEEEEECCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCCE--EEECCCSS-----CS
T ss_pred ---CcccceEEECcCCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCCC--ccccCCcc-----cC
Confidence 24567789999999999999998888889999999976653 2378999998754221 11111000 00
Q ss_pred CCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecCCcCeEEEEEeeCCCCCcccCc
Q psy12061 241 TGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAPN 320 (626)
Q Consensus 241 ~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~ 320 (626)
.....+.+.. +.+.+.|.|+|.|.|..|..... . .+......++.+|.++.+.....+.+.|+|+++ ...+...
T Consensus 339 ~~~~~C~~~~-l~~~t~Y~f~V~A~N~lG~~~S~-~--~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P--~~~~~~~ 412 (483)
T 3e0g_A 339 NESYQLLFQM-LPNQEIYNFTLNAHNPLGRSQST-I--LVNITEKVYPHTPTSFKVKDINSTAVKLSWHLP--GNFAKIN 412 (483)
T ss_dssp CSCEEEEEEC-CTTCCCEEEEEEEECSSCEEEEE-E--EECGGGGBCCCCCEEEEECCSSSSSCCEEEECC--SCCTTSB
T ss_pred CCEEEEEEcc-CCCCcEEEEEEEEEeCCCCcccc-e--EEEeccccCCCCCeeeEEEEecCCeEEEEECCC--CCCCCce
Confidence 1234566655 89999999999999999977532 1 333334455579999999877889999999984 3445567
Q ss_pred ceEEEEEEecCCC-cceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCC---CCCCccEEEEccCC
Q psy12061 321 IYYKIFWRKKNDT-EFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGP---GPESEVVTIFSAED 388 (626)
Q Consensus 321 ~~y~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~---~~~s~~~~~~t~~~ 388 (626)
..|.|+|+..+.. .|....... .......+.+.+|.|++.|.|+|+|. ..|. |+||....++|.++
T Consensus 413 L~YeVrYr~~~~~~~~~~vsv~~-~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 413 FLCEIEIKKSNSVQEQRNVTIQG-VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp CCCEEEEECSSSCCCEEECCCBC-CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCceEEEEEec-cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 8999999987643 354322211 11123356799999999999999999 6665 67777777776543
No 263
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.79 E-value=4.2e-19 Score=166.97 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=119.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceee-EEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESK-GRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~ 78 (626)
+.+|++++|.|.+. .|.|.+.|++++ .++. .. .....+ +. ...|+|.|+|.|.|..+...+. ..|.|.
T Consensus 107 v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~--~~-~~~~~~-~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~ 177 (289)
T 3mjg_X 107 LTEITEITIPCRVT-DPQLVVTLHEKKGDVALP--VP-YDHQRG-FS----GIFEDRSYICKTTIGDREVDSDAYYVYRL 177 (289)
T ss_dssp ESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC--CC-EETTTE-EE----ECCCSSEEEEEEEETTEEEECCCEEEEEC
T ss_pred eecCCeEEEEeEcC-CCCceEEEEeCCCCCccc--ee-ecCCcC-ee----eeccCcEEEEEEEeCCceeeeeeEEEEec
Confidence 57899999999999 788899999865 3332 11 111112 21 3679999999999877665443 566665
Q ss_pred e--CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCC
Q psy12061 79 H--GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADA 154 (626)
Q Consensus 79 ~--~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~ 154 (626)
. +|.+.. .+....+.+|++++|.|.+.+.|.| .+.|++++.......... ..........+.|.|.+++.+|+
T Consensus 178 ~~~~p~i~~-~~~~~~v~~G~~v~L~C~~~g~p~p--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 254 (289)
T 3mjg_X 178 QVSSINVSV-NAVQTVVRQGENITLMCIVIGNEVV--NFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDS 254 (289)
T ss_dssp CCCCCCCEE-EESCSEEETTSCEEEEEEEESCSSB--EEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCC
T ss_pred CCCCCCcEE-eCCcceeEcCCCEEEEEEECCCCCc--ceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhC
Confidence 5 444443 4455789999999999999998876 569998876543321000 00000012346899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCCCC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPG 184 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 184 (626)
|.|+|.|.|..|..+.++.|.|...|....
T Consensus 255 G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~~ 284 (289)
T 3mjg_X 255 GTYTCNVTESVNDHQDEKAINITVVESGHH 284 (289)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEC----
T ss_pred cEEEEEeecCCCCceeEEEEEEEEEecCcc
Confidence 999999999999999999999998776543
No 264
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.79 E-value=3.7e-19 Score=160.32 Aligned_cols=168 Identities=15% Similarity=0.240 Sum_probs=113.8
Q ss_pred CCCCceEEEEeeeCCCCC----CeeEEEeC--CEEc----c------------CCCcEEEccC-----CcEEEccCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPK----PKFVWKKD--GNII----G------------SGGRRKIFEN-----GNLLISPVSRDD 54 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~----p~i~W~~~--~~~i----~------------~~~~~~~~~~-----g~L~i~~v~~~d 54 (626)
|.+|++|+|.|.+.+.|. +.|.|+|+ +..+ . ..+|+.+..+ .+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 91 (228)
T 3bae_H 12 LKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTAD 91 (228)
T ss_dssp ECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGGG
T ss_pred ecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCccc
Confidence 578999999999999875 89999984 2221 0 1357776532 479999999999
Q ss_pred CEEEEEEEEcCCC------C---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeC
Q psy12061 55 SGIYSCTATNVHG------M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHN 120 (626)
Q Consensus 55 ~G~Y~C~a~n~~g------~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~ 120 (626)
+|.|.|.+.|..| . ....+.|.|.. +|.+...+|. ..+..|+.++|.|.+.+. |.| +.+.|+++
T Consensus 92 ~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~~P~p-~~v~W~~~ 169 (228)
T 3bae_H 92 TATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEP-VTLTWNSG 169 (228)
T ss_dssp CEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEBSSC-CEEEEGGG
T ss_pred CEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccEeCCC-EEEEEeeC
Confidence 9999999999865 1 12347888863 4545444333 346789999999999986 554 57799999
Q ss_pred CEEeccccCCc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEE
Q psy12061 121 GVRIGNMDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173 (626)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~ 173 (626)
+..+....... .....+ ...+.|.|..+...| |.|+|.|.|..|.......
T Consensus 170 ~~~~~~~~~~~~~~~~~~-~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 170 SLSSGVHTFPAVLQSDLY-TLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp TCCTTEEEEEEEEETTEE-EEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred CcccCceEcCceeCCCcE-EEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 87542110000 000111 123568999888766 9999999999887654443
No 265
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.78 E-value=6.5e-20 Score=163.80 Aligned_cols=161 Identities=15% Similarity=0.196 Sum_probs=107.2
Q ss_pred CCCCceEEEEeeeCCC---CC-CeeEEEeCCEEccCCCcE--EEc------cCCcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAA---PK-PKFVWKKDGNIIGSGGRR--KIF------ENGNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~---p~-p~i~W~~~~~~i~~~~~~--~~~------~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|.+.|. |. +.|.|+|++..+...... ... ..++|.|.+++.+|+|.|+|.|.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 5689999999999987 34 799999999887532111 111 12369999999999999999999987754
Q ss_pred eeeEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCC---
Q psy12061 70 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG--- 142 (626)
Q Consensus 70 ~~~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~--- 142 (626)
.....+ .+..+|.+...++.... ..|+.++|.|.+.|.+++.++|.|+|||..+..... .......++
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~----~~~~~~~~gt~~ 177 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKD----TAPVLDSDGSYF 177 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEE----CCCEECTTSCEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEECCEeccCcee----cccEECCCCCEE
Confidence 222222 33345655444443322 359999999999994333357899999998853210 001112233
Q ss_pred ---eEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 143 ---LLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 143 ---~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.|.|......|.|.|+|.|.|....
T Consensus 178 ~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 178 IYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 3444444444699999999997654
No 266
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.78 E-value=5.6e-19 Score=168.26 Aligned_cols=169 Identities=20% Similarity=0.226 Sum_probs=110.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc----cCCcEEEccCCCCCCEEEEEEEEcCCCCc-----eee
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----ENGNLLISPVSRDDSGIYSCTATNVHGMD-----ESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~----~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~ 72 (626)
+.+|++++|.|.+.+ +++.+.|+|+|..+....+.... .++.|.|.+++.+|+|.|+|.|.|..|.. ...
T Consensus 130 v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~ 208 (316)
T 3vh8_G 130 VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDP 208 (316)
T ss_dssp EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCC
T ss_pred cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCC
Confidence 458999999999954 56799999999887533221111 23579999999999999999999998752 444
Q ss_pred EEEEEEe---CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeec
Q psy12061 73 GRLIVLH---GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 73 ~~l~v~~---~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
..|.|.. +|.+... |. ..+.+|++++|.|.+.. |. ..+.|+|+|..+........ .........|.|.++
T Consensus 209 ~~l~V~~~~~~p~i~~~-~~-~~v~~G~~v~L~C~~~~-~~--~~~~W~k~g~~~~~~~~~~~--~~~~~~~~~L~i~~v 281 (316)
T 3vh8_G 209 LDIVVTGPYEKPSLSAQ-PG-PKVQAGESVTLSCSSRS-SY--DMYHLSREGGAHERRLPAVR--KVNRTFQADFPLGPA 281 (316)
T ss_dssp EEEEEECSSCCCEEEEE-SC-SCCCTTSCCEEEEEESS-CC--SEEEEEETTSSCCEEEECEE--CTTSCEEEEEECC--
T ss_pred EEEEecCCCCCCeEEeC-CC-CeecCCCcEEEEEECCC-CC--cEEEEEECCCcCCCceecee--ccCCceeEEEEcCCc
Confidence 6777764 3333332 33 36789999999999974 33 36799999987653210000 000002258999999
Q ss_pred CCCCCEeEEEEEEeCCCc-----eEEEEEEEEeCCC
Q psy12061 150 SFADAGEYECVVKSTVGK-----ISTKTTVIVEGPP 180 (626)
Q Consensus 150 ~~~d~g~Y~C~a~n~~g~-----~~~~~~l~v~~~P 180 (626)
+ |+|.|+|.|.|..+. .+..+.|.|.++|
T Consensus 282 ~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 282 T--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp -----CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred C--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 8 999999999997763 4666777777765
No 267
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.78 E-value=3.8e-18 Score=153.00 Aligned_cols=168 Identities=13% Similarity=0.243 Sum_probs=116.2
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--E---Ec--------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--N---II--------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~---~i--------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.| .+.|.|+|++ . .+ ...+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D~ 91 (223)
T 1dee_B 12 VQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDT 91 (223)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHHHC
Confidence 57899999999998876 4799999842 1 11 01357777643 2699999999999
Q ss_pred EEEEEEEEcCCC---C---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEee-CCEE
Q psy12061 56 GIYSCTATNVHG---M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTH-NGVR 123 (626)
Q Consensus 56 G~Y~C~a~n~~g---~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~-~~~~ 123 (626)
|.|.|.+.+..| . ....+.|.|.. +|.+....|.. .+..|+.++|.|.+.+. |.| +++.|++ ||..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~~g~~ 169 (223)
T 1dee_B 92 AVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCE-NSNPSSTVAVGCLAQDFLPDS-ITFSWKYKNNSD 169 (223)
T ss_dssp EEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTT-CCCSSSEEEEEEEEEEEBSSC-CEEEEEETTSCB
T ss_pred EEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCc-ccCCCCcEEEEEEEEEEeCCC-eEEEeEccCCCc
Confidence 999999998764 1 12346888863 34443322222 35789999999999987 543 5779999 9888
Q ss_pred ecccc-CCc-cCCCeeEecCCeEEEeecCC--CCCEeEEEEEEeCCCceEEEE
Q psy12061 124 IGNMD-LNE-LETPNINIDGGLLEITNASF--ADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 124 ~~~~~-~~~-~~~~~~~~~~~~l~i~~~~~--~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
+.... ... .....+. ..+.|.|..... .|.|.|+|.|.|..+......
T Consensus 170 l~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 170 ISSTRGFPSVLRGGKYA-ATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp CSCEEECCCEEETTEEE-EEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred cceeEECCccccCCeEE-EEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 75410 000 0012222 235688888776 789999999999998765544
No 268
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.78 E-value=2.2e-18 Score=158.51 Aligned_cols=174 Identities=14% Similarity=0.172 Sum_probs=117.8
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EEc-----------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NII-----------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~i-----------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. |.+.+.|+|.. ..+ ...+|+.+..++ +|.|.+++.+|+
T Consensus 18 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 97 (256)
T 3juy_B 18 KKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADT 97 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcccC
Confidence 5789999999999884 67899999732 111 013577776332 499999999999
Q ss_pred EEEEEEEEcC------------CCCceeeEEEEEEeC--------------CceeeeCCCceEEecCCcEEEEEEecccC
Q psy12061 56 GIYSCTATNV------------HGMDESKGRLIVLHG--------------PSYYEQLPPKITIAAHRNLQLRCSAHTEE 109 (626)
Q Consensus 56 G~Y~C~a~n~------------~g~~~~~~~l~v~~~--------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p 109 (626)
|.|.|.|.|. .+.....+.|.|... +..+...|....+.+|++++|.|.+.+.+
T Consensus 98 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~ 177 (256)
T 3juy_B 98 AVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSI 177 (256)
T ss_dssp EEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESSCC
T ss_pred EEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECCCc
Confidence 9999999987 233445577888664 23445567889999999999999999976
Q ss_pred CcceeEEEeeC--CEEecc---cc--CCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEE
Q psy12061 110 LLDVAYIWTHN--GVRIGN---MD--LNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIV 176 (626)
Q Consensus 110 ~p~~~i~W~~~--~~~~~~---~~--~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v 176 (626)
. ...+.|+|. +..... .. .......++.. ....|.|.+++.+|+|.|+|.|.|..+.. .....|.|
T Consensus 178 ~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 178 R-SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp T-TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred C-CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 5 135689883 222210 00 00000122222 22369999999999999999999865432 33344444
No 269
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.78 E-value=2.2e-17 Score=153.98 Aligned_cols=256 Identities=17% Similarity=0.191 Sum_probs=151.2
Q ss_pred EecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 93 IAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 93 v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
+..|++++|.|.+...+ .|.|++||..... ..++.|.|.+++..|+|.|+|.+ .|.....+
T Consensus 18 ~~~G~~v~l~C~~~~~~----~i~W~~~~~~~~~------------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~ 78 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEED----GITWTLDQSSEVL------------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHS 78 (306)
T ss_dssp SCCCEEEEEECSSSCCS----SCEEEETTCCCCC------------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEE
T ss_pred CccCCcEEEECCCCCCC----cCEEEECCccccC------------CCCCEEEEEecCcCCCceEEEee---CCcccceE
Confidence 45799999999988432 4689999875321 25689999999999999999999 46666666
Q ss_pred EEEEeC----------------CCCCCCceEEEEEecc-ceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee
Q psy12061 173 TVIVEG----------------PPGLPGGVQVVEVHKT-SATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235 (626)
Q Consensus 173 ~l~v~~----------------~P~~p~~~~~~~~~~~-~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~ 235 (626)
.|.|.. ||. +.++.|...... .+++.|++..+. .....|...+. .....|..........
T Consensus 79 ~l~v~~~~~~~~~t~i~~~~~~pp~-~~~lsC~~~~~~~~~~C~W~pg~~~-~l~~~~~~~r~-~~~~~~~~C~~~~~~~ 155 (306)
T 3d85_D 79 LLLLHKKEDGIWSTDILKDQKEPKN-KTFLRCEAKNYSGRFTCWWLTTIST-DLTFSVKSSRG-SSDPQGVTCGAATLSA 155 (306)
T ss_dssp EEEEEEEETTEECCCSSCCCC---C-CCCCEEEBSSSSSEEEEEEEESCCS-SEEEEEEEEEC-SSSCEEEEECCCEEEE
T ss_pred EEEEEeccCCcceeeeecccCCCCC-CCcceEEcCCcccCcEEEecCCCCC-ceeEEEEEEec-CCCCcceECCCCCCCc
Confidence 665531 233 336777655444 899999987552 22234443321 1122344332211111
Q ss_pred eeeccCCce-eEEE---EeeccCC----ceEEEEEEEecCCccCCCCCCCCcccCCCCCCCCCCceeEeecC-CcCeEEE
Q psy12061 236 EVDRYTGRK-EASI---ENVLVPW----STYEFKVIAGNELGYGEPSSPSPQYNTPADKPYQAPSRIGGGGG-KIGDLSI 306 (626)
Q Consensus 236 ~~~~~~~~~-~~~i---~~~l~~~----~~y~~~v~a~n~~g~~~~s~~~~~~~~~~~~p~~~p~~~~~~~~-~~~~v~l 306 (626)
....+.+.. ...+ ...+.+. ..|.|+|.|.|..|...+.. .+.......+.||.++.+... ....+.|
T Consensus 156 ~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~---~f~~~~iVkPdPP~~l~~~~~~~~~~l~v 232 (306)
T 3d85_D 156 ERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTS---SFFIRDIIKPDPPKNLQLKPLKNSRQVEV 232 (306)
T ss_dssp EEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEE---EECHHHHBCCCCCEEEEEEEC----CEEE
T ss_pred cceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCccccce---EEEehhcEecCCCceEEEEEecCCCcEEE
Confidence 111111111 0111 0112333 58999999999999653332 222111223358889988864 3489999
Q ss_pred EEeeCCCCCcccC----cceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEE
Q psy12061 307 SWEPLPREKQNAP----NIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVT 382 (626)
Q Consensus 307 ~W~~~~~~~~~~~----~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~ 382 (626)
+|+++. ..+.+ ...|.|+|+..+...|...... +. ..+.+. +++.|.|+|+|.+..|.|.||++..
T Consensus 233 sW~~P~--~~~~p~~~~~L~Y~vryr~~~~~~~~~~~~~---~~--ts~~l~---~~~~Y~vqVRa~~~~~~G~WSeWS~ 302 (306)
T 3d85_D 233 SWEYPD--TWSTPHSYFSLTFCVQVQGKSKREKKDRVFT---DK--TSATVI---CRKNASISVRAQDRYYSSSWSEWAS 302 (306)
T ss_dssp EEECCT--TSCSCTTTSCEEEEEEEECC------CEEEE---SS--SEEEEC---CCSSCEEEEEEEESSSCCCCCCCEE
T ss_pred EEcCCC--CCcCCCceeeEEEEEEEEECCCCccEEEeec---cc--cEEEEe---CCCeEEEEEEeccCCCCCCCCCCCC
Confidence 999843 33332 3689999998775555433221 11 234443 5899999999999989899988775
Q ss_pred E
Q psy12061 383 I 383 (626)
Q Consensus 383 ~ 383 (626)
.
T Consensus 303 ~ 303 (306)
T 3d85_D 303 V 303 (306)
T ss_dssp E
T ss_pred C
Confidence 4
No 270
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.78 E-value=3e-17 Score=153.02 Aligned_cols=245 Identities=13% Similarity=0.117 Sum_probs=141.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+..|++|+|.|.+.. +. .|.|++||..... ..+++|.|.+++..|+|.|+|.| .|.....+.|.|..++
T Consensus 18 ~~~G~~v~l~C~~~~-~~-~i~W~~~~~~~~~------~~~~~L~i~~~~~~d~G~YtC~~---~~~~~~~~~l~v~~~~ 86 (306)
T 3d85_D 18 DAPGEMVVLTCDTPE-ED-GITWTLDQSSEVL------GSGKTLTIQVKEFGDAGQYTCHK---GGEVLSHSLLLLHKKE 86 (306)
T ss_dssp SCCCEEEEEECSSSC-CS-SCEEEETTCCCCC------EESSEEEEEECSGGGCEEEEEEE---TTEEEEEEEEEEEEEE
T ss_pred CccCCcEEEECCCCC-CC-cCEEEECCccccC------CCCCEEEEEecCcCCCceEEEee---CCcccceEEEEEEecc
Confidence 568999999999984 33 8999999975422 25678999999999999999999 3666667777765422
Q ss_pred ------ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC---CccCCCee-E-----ecCCeEEE
Q psy12061 82 ------SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL---NELETPNI-N-----IDGGLLEI 146 (626)
Q Consensus 82 ------~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~---~~~~~~~~-~-----~~~~~l~i 146 (626)
.++..++ . .. ....|.|.+...+. .+...|..++.......+ ........ . .....+.|
T Consensus 87 ~~~~~t~i~~~~~-~---pp-~~~~lsC~~~~~~~-~~~C~W~pg~~~~l~~~~~~~r~~~~~~~~~C~~~~~~~~~c~v 160 (306)
T 3d85_D 87 DGIWSTDILKDQK-E---PK-NKTFLRCEAKNYSG-RFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERVRG 160 (306)
T ss_dssp TTEECCCSSCCCC--------CCCCCEEEBSSSSS-EEEEEEEESCCSSEEEEEEEEECSSSCEEEEECCCEEEEEEEC-
T ss_pred CCcceeeeecccC-C---CC-CCCcceEEcCCccc-CcEEEecCCCCCceeEEEEEEecCCCCcceECCCCCCCccceee
Confidence 1111110 0 00 12234444433321 234444443320000000 00000000 0 00011111
Q ss_pred eec-----------------CCCCCEeEEEEEEeCCCceEEEEEEEE--eCCCCCCCceEEEEEec-cceEEEEecCCCC
Q psy12061 147 TNA-----------------SFADAGEYECVVKSTVGKISTKTTVIV--EGPPGLPGGVQVVEVHK-TSATIQWTDGATN 206 (626)
Q Consensus 147 ~~~-----------------~~~d~g~Y~C~a~n~~g~~~~~~~l~v--~~~P~~p~~~~~~~~~~-~~~~l~W~~~~~~ 206 (626)
.+. .......++|.|.|..|..+....+.+ ...|.||.++.+..... ..+.|+|++|...
T Consensus 161 ~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~ 240 (306)
T 3d85_D 161 DNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYEQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTW 240 (306)
T ss_dssp -CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEEEEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTS
T ss_pred cCccccceeeeeeccccccccccEEEEEEEEEEccCCccccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCC
Confidence 110 122456789999999997766655544 46899999999976443 8999999998644
Q ss_pred CCc----ccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCCCCCC
Q psy12061 207 GRP----ITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEPSSPS 277 (626)
Q Consensus 207 ~~~----~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~s~~~ 277 (626)
..+ .+.|.|+|+..+...|..... ...+++ . |.++..|.|+|+|.+..|.+.+|..+
T Consensus 241 ~~p~~~~~L~Y~vryr~~~~~~~~~~~~----------~~~ts~---~-l~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 241 STPHSYFSLTFCVQVQGKSKREKKDRVF----------TDKTSA---T-VICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp CSCTTTSCEEEEEEEECC------CEEE----------ESSSEE---E-ECCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred cCCCceeeEEEEEEEEECCCCccEEEee----------ccccEE---E-EeCCCeEEEEEEeccCCCCCCCCCCC
Confidence 333 379999999877655643311 011122 2 56799999999999998888777764
No 271
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.78 E-value=1.6e-18 Score=159.72 Aligned_cols=162 Identities=18% Similarity=0.286 Sum_probs=113.1
Q ss_pred CCCCceEEEEeeeCCCC------CCeeEEEeC--CEEc------------cCCCcEEEccC---CcEEEccCCCCCCEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP------KPKFVWKKD--GNII------------GSGGRRKIFEN---GNLLISPVSRDDSGIY 58 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p------~p~i~W~~~--~~~i------------~~~~~~~~~~~---g~L~i~~v~~~d~G~Y 58 (626)
|.+|++|+|.|.+.+.| .+.|.|+|+ |..+ ...+|+.+..+ .+|.|.+++.+|+|.|
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y 96 (264)
T 2gjj_A 17 VSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAVY 96 (264)
T ss_dssp EETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred ecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEEE
Confidence 56899999999999988 679999994 3211 12467666543 3799999999999999
Q ss_pred EEEEEcCCCC-ceeeEEEEEEeCC------------------ce-eeeCCCceEEecCCcEEEEEEecccCCcceeEEEe
Q psy12061 59 SCTATNVHGM-DESKGRLIVLHGP------------------SY-YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWT 118 (626)
Q Consensus 59 ~C~a~n~~g~-~~~~~~l~v~~~p------------------~~-~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~ 118 (626)
.|.|.|..+. ....+.|.|..+| .+ +.. +....+.+|++++|.|.+.+.+.+...+.|+
T Consensus 97 ~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 175 (264)
T 2gjj_A 97 YCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQ-SGPEVVKTGASVKISCKASGYSFTGYFINWV 175 (264)
T ss_dssp EEEECSSSSCEECCCEEEEEECC-------------------CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred EEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeC-CCCEEEcCCCcEEEEEEEeCCccCCeEEEEE
Confidence 9999987654 2345688887653 22 333 3345799999999999999887533467999
Q ss_pred eCC--EE---ec---ccc----CCccCCCeeEe------cCCeEEEeecCCCCCEeEEEEEEeC
Q psy12061 119 HNG--VR---IG---NMD----LNELETPNINI------DGGLLEITNASFADAGEYECVVKST 164 (626)
Q Consensus 119 ~~~--~~---~~---~~~----~~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~C~a~n~ 164 (626)
|+. .. +. ... .......++.+ ....|.|.+++.+|+|.|+|.+.|.
T Consensus 176 r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 176 KKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 863 21 11 000 00000123322 2358999999999999999999985
No 272
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.77 E-value=7e-19 Score=176.94 Aligned_cols=168 Identities=17% Similarity=0.292 Sum_probs=112.1
Q ss_pred CCCCceEEEEeeeCCC-CC-CeeEEEeCCEEccCCC-cEEEccCC------cEEEccCCCCCCEEEEEEEEcCCCCceee
Q psy12061 2 AGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIGSGG-RRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESK 72 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~-p~i~W~~~~~~i~~~~-~~~~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 72 (626)
+.+|++++|.|.+.|. |. +.|.|+|++..+.... ...+..+| .|.|.+++.+| |.|+|.|.|..+.....
T Consensus 144 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 222 (457)
T 1hzh_H 144 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 222 (457)
T ss_dssp CCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE
T ss_pred ccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee
Confidence 4689999999999987 65 7999999997653111 11112233 59999999999 99999999987765444
Q ss_pred EEEEEE-----------------eCCceeeeCCCceE-EecCCcEEEEEEecccCCc--ceeEEEeeCCEEeccccCCcc
Q psy12061 73 GRLIVL-----------------HGPSYYEQLPPKIT-IAAHRNLQLRCSAHTEELL--DVAYIWTHNGVRIGNMDLNEL 132 (626)
Q Consensus 73 ~~l~v~-----------------~~p~~~~~~~~~~~-v~~g~~~~l~C~~~~~p~p--~~~i~W~~~~~~~~~~~~~~~ 132 (626)
..+.+. .+|.+...+|.... +.+|++++|.|.+.+.|++ .+.|.|+|++..+.....
T Consensus 223 ~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~--- 299 (457)
T 1hzh_H 223 KKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT--- 299 (457)
T ss_dssp EECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEE---
T ss_pred EEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccccc---
Confidence 444322 13444334444332 6789999999999987653 357899999998864210
Q ss_pred CCCeeEecCCeEEEeec---CCCC---CEeEEEEEEeCCCceEEEEEE
Q psy12061 133 ETPNINIDGGLLEITNA---SFAD---AGEYECVVKSTVGKISTKTTV 174 (626)
Q Consensus 133 ~~~~~~~~~~~l~i~~~---~~~d---~g~Y~C~a~n~~g~~~~~~~l 174 (626)
.......++.|.|.+. ...| +|.|+|.|.|..+.......+
T Consensus 300 -~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v 346 (457)
T 1hzh_H 300 -KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTI 346 (457)
T ss_dssp -EEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEE
T ss_pred -ccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEE
Confidence 0112234455665532 3555 999999999876655444333
No 273
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.77 E-value=2.9e-18 Score=156.08 Aligned_cols=163 Identities=19% Similarity=0.249 Sum_probs=114.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe--------------CCEEcc---CCCcEEEccCC----cEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK--------------DGNIIG---SGGRRKIFENG----NLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~--------------~~~~i~---~~~~~~~~~~g----~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++|+|.|.+.+ |.+.|.|+| ++.... ..+|+.+..++ +|.|.+++.+|+|.|.|
T Consensus 14 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 92 (240)
T 3q5y_A 14 KEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYFC 92 (240)
T ss_dssp EETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEEE
T ss_pred ecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEEE
Confidence 578999999999986 788999999 222221 13577766432 69999999999999999
Q ss_pred EEEcCC---CCceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 61 TATNVH---GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 61 ~a~n~~---g~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
.|.+.. ......+.|.|.. +|.+....+....+..|+.++|.|.+.+.+++.+.+.|++||..+.......
T Consensus 93 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~ 172 (240)
T 3q5y_A 93 ASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTD 172 (240)
T ss_dssp EEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEC
T ss_pred EEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecC
Confidence 998432 2233456788863 4555545556666678999999999999544446789999999986532100
Q ss_pred cCCCeeEecC------CeEEEeecCCCC-CEeEEEEEEeCCCc
Q psy12061 132 LETPNINIDG------GLLEITNASFAD-AGEYECVVKSTVGK 167 (626)
Q Consensus 132 ~~~~~~~~~~------~~l~i~~~~~~d-~g~Y~C~a~n~~g~ 167 (626)
. ......+ +.|.|......| .|.|+|.|.|....
T Consensus 173 ~--~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 173 P--QAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp S--SCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred C--ceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 0 0011112 348899988888 77999999987654
No 274
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.77 E-value=5.6e-20 Score=183.59 Aligned_cols=163 Identities=13% Similarity=0.232 Sum_probs=115.5
Q ss_pred CCCCceEEEEeeeCCC-CCC-eeEEEeCCEEccC--------CCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 2 AGEGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS--------GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p-~i~W~~~~~~i~~--------~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
+.+|+.++|.|.+.|. |.| .|.|+|++..+.. .+++.+ .+.|.|.+++.+| |.|+|.|.|..|....
T Consensus 131 ~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~ 207 (434)
T 1igy_B 131 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVPSSPRPS-ETVTCNVAHPASSTKV 207 (434)
T ss_dssp CCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEE--EEEEEEETTTTTS-SCCEEEEECTTTTCCE
T ss_pred cCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEE--EEEEEEcchhcCC-CcEEEEEEeCCCCccc
Confidence 3589999999999987 777 9999999976421 122221 2459999999999 9999999999987554
Q ss_pred eEEEEEEe------------CCceeeeCCCceE-EecCCcEEEEEEecccCC--cceeEEEeeCCEEeccccCCc---cC
Q psy12061 72 KGRLIVLH------------GPSYYEQLPPKIT-IAAHRNLQLRCSAHTEEL--LDVAYIWTHNGVRIGNMDLNE---LE 133 (626)
Q Consensus 72 ~~~l~v~~------------~p~~~~~~~~~~~-v~~g~~~~l~C~~~~~p~--p~~~i~W~~~~~~~~~~~~~~---~~ 133 (626)
...+.+.. .|.+...+|.... +.+|++++|.|.+.+.++ +.+.|.|+|++..+....... ..
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~ 287 (434)
T 1igy_B 208 DKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQF 287 (434)
T ss_dssp EEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCC
T ss_pred eeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCC
Confidence 44443321 1444444444332 789999999999998853 345779999998775321100 00
Q ss_pred CCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 134 TPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 134 ~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
...+ ...+.|.|.+++.+|+|.|+|.|.|..|..
T Consensus 288 ~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 321 (434)
T 1igy_B 288 NSTF-RVVSALPIMHQDWLNGKEFKCRVNSAAFPA 321 (434)
T ss_dssp SSSC-CCCCCEECCHHHHHHTCCCBCCBCCSSCSS
T ss_pred CCcE-EEEEEEEECHHHccCCCcEEEEEECCCCCC
Confidence 1111 134579999999999999999999998865
No 275
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.77 E-value=9.6e-19 Score=156.94 Aligned_cols=157 Identities=20% Similarity=0.185 Sum_probs=104.1
Q ss_pred ceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEE
Q psy12061 422 RGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVH 501 (626)
Q Consensus 422 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~ 501 (626)
++.|.+|.|++...... .. ........+.+++.+|.|++.|.|+|+|+|..|.|++|....+.+....|+.+|..+
T Consensus 19 ~~~Vt~Y~~~~~~~~~~-~~--~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~- 94 (232)
T 4go6_B 19 NVMVTHYFLPPDDAVPS-DD--DLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAI- 94 (232)
T ss_dssp EEEECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEE-
T ss_pred CEEEEEEEEEeeCCCCC-cE--EEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeee-
Confidence 36688898876332221 11 112233445689999999999999999999999999998888888776666666554
Q ss_pred EeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcccc---------cee---------eecCccceEEecCCCC
Q psy12061 502 IKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAN---------DTI---------IPVGNTLDADIVDLSP 563 (626)
Q Consensus 502 ~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~---------~~~---------~~~~~~~~~~l~~L~p 563 (626)
....+.+++.|+|+ +|.+.+|.|.+|.|+|+..+....... ... ........+.+.+|.+
T Consensus 95 ~~~~~~~sv~l~W~--~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 172 (232)
T 4go6_B 95 KISKSPDGAHLTWE--PPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTT 172 (232)
T ss_dssp EEEEETTEEEEEEE--CCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESS
T ss_pred EEecCCCEEEEEEe--CCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCcc
Confidence 45567889999999 677788999999998876544311100 000 1111222334568999
Q ss_pred CceEEEEEEEEecCCCCCCCC
Q psy12061 564 GKRYHMRVLAFSNGGDGRMSS 584 (626)
Q Consensus 564 ~~~Y~~~V~a~~~~G~g~~s~ 584 (626)
++.|.|+|+|+|.+|.|++|+
T Consensus 173 ~t~Y~frV~A~N~~G~Gp~S~ 193 (232)
T 4go6_B 173 KPAIIFRIAARNEKGYGPATQ 193 (232)
T ss_dssp SEEEEEEEEEECSSCBCCCEE
T ss_pred CCceEEEEEEECCCcCCCCcc
Confidence 999999999999999999884
No 276
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.77 E-value=4.2e-19 Score=157.29 Aligned_cols=160 Identities=18% Similarity=0.246 Sum_probs=105.3
Q ss_pred CCCceEEEEeeeCCCCC----CeeEEEeCCEEccCC--CcEEEccCCcEEEcc---CCC---CCCEEEEEEEEcCCCCce
Q psy12061 3 GEGGNVTIFCNPEAAPK----PKFVWKKDGNIIGSG--GRRKIFENGNLLISP---VSR---DDSGIYSCTATNVHGMDE 70 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~----p~i~W~~~~~~i~~~--~~~~~~~~g~L~i~~---v~~---~d~G~Y~C~a~n~~g~~~ 70 (626)
.+|++++|.|.+.|.|+ +.|.|+|+|.++... .......+|.|.|.+ +.. +|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 58999999999998753 499999999888643 223345567665543 334 459999999999887653
Q ss_pred eeEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCC----
Q psy12061 71 SKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGG---- 142 (626)
Q Consensus 71 ~~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~---- 142 (626)
....+ .+..+|.+...++.... ..|..++|.|.+.+.+++.++|.|+|||..+..... .......++
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~----~~~~~~~~gt~~~ 170 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKT----TPPVLDSDGSFFL 170 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEE----CCCEECTTSCEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHH-hcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccc----cCceECCCCCEEE
Confidence 33333 23345655444443322 346669999999996555567899999998864210 001112233
Q ss_pred --eEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 143 --LLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 143 --~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.|.|......|.|.|+|.|.|....
T Consensus 171 ~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 171 YSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 3445554446799999999997653
No 277
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.77 E-value=3.4e-18 Score=152.98 Aligned_cols=165 Identities=16% Similarity=0.267 Sum_probs=115.1
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--E---Ecc--------------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--N---IIG--------------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~---~i~--------------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.| .+.|.|+|.. . .+. ..+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 91 (220)
T 2fbj_H 12 VQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSEDT 91 (220)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChhhC
Confidence 57899999999999876 5799999842 1 110 1367777643 2799999999999
Q ss_pred EEEEEEEEcCCCC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccc
Q psy12061 56 GIYSCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNM 127 (626)
Q Consensus 56 G~Y~C~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~ 127 (626)
|.|.|.+.|..+. ....+.|.|.. +|.+...+ ...+..|+.++|.|.+.+. |...+.+.|++++..+...
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~ 169 (220)
T 2fbj_H 92 ALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT--LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTV 169 (220)
T ss_dssp EEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEE
T ss_pred EEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee--cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceE
Confidence 9999999987653 23446888864 23333322 2335789999999999987 4413578999998775211
Q ss_pred cCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceE
Q psy12061 128 DLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKIS 169 (626)
Q Consensus 128 ~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~ 169 (626)
.... .....+. ..+.|.|......|.|.|+|.|.|..|...
T Consensus 170 ~~~~~~~~~g~~~-~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 170 NFPPALASGGRYT-MSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp ECCCEECSSSCEE-EEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred ecCceECCCCCEE-EEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 1000 0111111 123588988888999999999999998754
No 278
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.77 E-value=1.6e-18 Score=158.82 Aligned_cols=177 Identities=15% Similarity=0.270 Sum_probs=116.4
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--E---Ec--------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--N---II--------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~---~i--------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. +.+.+.|+|.. . .+ ...+|+.+..++ +|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (253)
T 3liz_H 12 VQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSEDT 91 (253)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGGC
T ss_pred ECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhC
Confidence 5789999999999873 35689999832 1 11 012566665443 399999999999
Q ss_pred EEEEEEEEcCC----CCceeeEEEEEE----eCCceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEecc
Q psy12061 56 GIYSCTATNVH----GMDESKGRLIVL----HGPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGN 126 (626)
Q Consensus 56 G~Y~C~a~n~~----g~~~~~~~l~v~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~ 126 (626)
|.|.|.+.|.. +.....+.|.|. .+|.+... +....+..|+.++|.|.+.+ .|. .+.+.|++++..+..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~-~~~~~~~~g~~v~L~C~~~g~~P~-~~~v~W~~~~~~~~~ 169 (253)
T 3liz_H 92 AMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPL-APGSAAQTNSMVTLGCLVKGYFPE-PVTVTWNSGSLSSGV 169 (253)
T ss_dssp EEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEE-CC------CCEEEEEEEEEEEBSS-CCEEEEGGGTBCTTE
T ss_pred EEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEe-cCCcccCCCCcEEEEEEEeeEeCC-CeEEEEEeCCeecce
Confidence 99999999863 223445678886 24444433 33445668999999999998 554 357899999874321
Q ss_pred ccCCc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEeCCCCC
Q psy12061 127 MDLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVEGPPGL 182 (626)
Q Consensus 127 ~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~ 182 (626)
..... .....+. ..+.|.|......| |.|+|.|.|..+.......+.+..+|.+
T Consensus 170 ~~~~~~~~~g~~~-~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~~~~~~ 224 (253)
T 3liz_H 170 HTFPAVLQSDLYT-LSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPRDCGCK 224 (253)
T ss_dssp EECCCEEETTEEE-EEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC-----
T ss_pred EeCCccccCCeEE-EEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCcccCCC
Confidence 11000 0012222 22679999999999 9999999999998877777776643333
No 279
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.77 E-value=3.5e-18 Score=158.16 Aligned_cols=163 Identities=15% Similarity=0.203 Sum_probs=110.5
Q ss_pred CCCCceEEEEeeeCCCC-----CCeeEEEeCC--EE---cc---------CCCcEEEccCC---cEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP-----KPKFVWKKDG--NI---IG---------SGGRRKIFENG---NLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p-----~p~i~W~~~~--~~---i~---------~~~~~~~~~~g---~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++++|.|.+.+.| .+.|.|+|+. .. +. ..+|+.+..++ +|.|.+++.+|+|.|.
T Consensus 27 v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 106 (268)
T 1x9q_A 27 VSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGVYF 106 (268)
T ss_dssp CCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEEEE
Confidence 67999999999999987 4799999842 21 11 24566665332 6999999999999999
Q ss_pred EEEEcCCCC-ceeeEEEEEEeCCc----------------------eeeeCCCceEEecCCcEEEEEEecccCCcceeEE
Q psy12061 60 CTATNVHGM-DESKGRLIVLHGPS----------------------YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYI 116 (626)
Q Consensus 60 C~a~n~~g~-~~~~~~l~v~~~p~----------------------~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~ 116 (626)
|.|.|..+. ....+.|.|...+. +....|....+.+|++++|.|.+.+.+.....+.
T Consensus 107 C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~ 186 (268)
T 1x9q_A 107 CSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMN 186 (268)
T ss_dssp EEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEE
T ss_pred EEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEEE
Confidence 999988654 23446777765321 1122345678999999999999998765345679
Q ss_pred EeeC--CEEeccc-cC-----------CccCCCeeEec------CCeEEEeecCCCCCEeEEEEEEeC
Q psy12061 117 WTHN--GVRIGNM-DL-----------NELETPNINID------GGLLEITNASFADAGEYECVVKST 164 (626)
Q Consensus 117 W~~~--~~~~~~~-~~-----------~~~~~~~~~~~------~~~l~i~~~~~~d~g~Y~C~a~n~ 164 (626)
|+|+ +..+..- .. ......++... ...|.|.+++.+|+|.|+|.+.+.
T Consensus 187 W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 187 WVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 9985 3222100 00 00012344332 257999999999999999999874
No 280
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.77 E-value=1.7e-18 Score=158.55 Aligned_cols=163 Identities=15% Similarity=0.227 Sum_probs=112.5
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc------c-----------CCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII------G-----------SGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i------~-----------~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.| .+.|.|+|+. ..+ . ..+|+.+..+ .+|.|.+++.+|+
T Consensus 18 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 97 (261)
T 2xqy_G 18 VKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSEDS 97 (261)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcccC
Confidence 57899999999999887 6899999863 211 1 1357777543 3799999999999
Q ss_pred EEEEEEEEcCCCC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEeccc
Q psy12061 56 GIYSCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNM 127 (626)
Q Consensus 56 G~Y~C~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~ 127 (626)
|.|.|.+.|..+. ....+.|.|.. +|.+...+|. ..+..|+.++|.|.+.+. |.+ +.+.|++++..+...
T Consensus 98 G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~v~~g~~v~L~C~~~g~~P~~-i~v~W~k~g~~~~~~ 175 (261)
T 2xqy_G 98 AVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEP-VTLTWNSGSLSSGVH 175 (261)
T ss_dssp EEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-CC--CCSEEEEEEEEEEEBSSC-CEEEEGGGTCCTTEE
T ss_pred eEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC-ccccCCCcEEEEEEEEeEeCCC-CEEEEecCCCcCceE
Confidence 9999999986532 12346788864 3544443333 246789999999999985 543 578999998765321
Q ss_pred cCCc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 128 DLNE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 128 ~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.... .....+ ...+.|.|..+...| |.|+|.|.|.....
T Consensus 176 ~~~~~~~~g~~-~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 176 TFPAVLQSDLY-TLSSSVTVTSSTWPS-QSITCNVAHPASST 215 (261)
T ss_dssp ECCCEEETTEE-EEEEEEEEETTTTTT-SCCEEEEEEGGGTE
T ss_pred ecCceecCCcE-EEEEEEEEeccccCC-CEEEEEEEECCCCc
Confidence 1000 001111 124579999988878 99999999976653
No 281
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.76 E-value=2.3e-18 Score=160.20 Aligned_cols=181 Identities=15% Similarity=0.249 Sum_probs=116.8
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EEcc-----------------CCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NIIG-----------------SGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~i~-----------------~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. +.+.+.|+|.. ..+. ..+|+.+..++ +|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (280)
T 3fku_X 12 KKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSEDT 91 (280)
T ss_dssp ECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCSTTC
T ss_pred ECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhhC
Confidence 5789999999999885 56799999832 1110 12466666332 699999999999
Q ss_pred EEEEEEEEcC---------CCCceeeEEEEEEe--------------CCceeeeCCCceEEecCCcEEEEEEecccCCcc
Q psy12061 56 GIYSCTATNV---------HGMDESKGRLIVLH--------------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLD 112 (626)
Q Consensus 56 G~Y~C~a~n~---------~g~~~~~~~l~v~~--------------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~ 112 (626)
|.|.|.+.|. .......+.|.|.. ++..+..+|. ..+.+|++++|.|.+.+.+.+.
T Consensus 92 G~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~ 170 (280)
T 3fku_X 92 AVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNSNNVGN 170 (280)
T ss_dssp EECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCCCCCCT
T ss_pred EEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecCCCCCC
Confidence 9999999987 12233456777765 2444555555 8999999999999999833222
Q ss_pred eeEEEeeC--CEEeccc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCc---eEEEEEEEEeC
Q psy12061 113 VAYIWTHN--GVRIGNM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGK---ISTKTTVIVEG 178 (626)
Q Consensus 113 ~~i~W~~~--~~~~~~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~---~~~~~~l~v~~ 178 (626)
..+.|+|. +..+..- ........|+.. ....|.|.+++.+|+|.|+|.+.|..+. ....+.|.|..
T Consensus 171 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~ 250 (280)
T 3fku_X 171 QGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSAVVFGGGTKLTVLG 250 (280)
T ss_dssp TCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTEEEEBCCCEEEEC-
T ss_pred ceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCceEECCCEEEEECC
Confidence 35689873 3222110 000000122222 1235999999999999999999987632 34455777766
Q ss_pred CCCCC
Q psy12061 179 PPGLP 183 (626)
Q Consensus 179 ~P~~p 183 (626)
.|..+
T Consensus 251 ~~~~~ 255 (280)
T 3fku_X 251 QPKAA 255 (280)
T ss_dssp -----
T ss_pred CCCCC
Confidence 55433
No 282
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.76 E-value=1.6e-17 Score=167.76 Aligned_cols=171 Identities=13% Similarity=0.149 Sum_probs=112.3
Q ss_pred CCCceEEEEeeeCCC-CC-C-eeEEEeCCEEccCCCcEEE--ccCC------cEEEccCCCCCCEEEEEEEEcCCCCc-e
Q psy12061 3 GEGGNVTIFCNPEAA-PK-P-KFVWKKDGNIIGSGGRRKI--FENG------NLLISPVSRDDSGIYSCTATNVHGMD-E 70 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~-p~-p-~i~W~~~~~~i~~~~~~~~--~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~-~ 70 (626)
.+|+.++|.|.+.|. |. | .|.|+|++..+.......+ ..+| .|.|..+..+|+|.|+|.|.|..+.. .
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 218 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQD 218 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCcee
Confidence 479999999999997 66 5 9999999864321100011 1222 48899999999999999999998742 1
Q ss_pred eeEEEEEE------------------eCCceeeeCCCceEEecCCcEEEEEEecccCC-cceeEEEeeCCEEeccccCCc
Q psy12061 71 SKGRLIVL------------------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEEL-LDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 71 ~~~~l~v~------------------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~-p~~~i~W~~~~~~~~~~~~~~ 131 (626)
....+.|. .+|.+...+|....+.+|++++|.|.+.+.++ ..+.|.| ++..+.......
T Consensus 219 ~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~ 296 (475)
T 1iga_A 219 VTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGP 296 (475)
T ss_pred eeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccC
Confidence 22232221 23444344455555689999999999998744 1257899 444433211000
Q ss_pred ---cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 132 ---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 132 ---~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
...+.+ ...+.|.|.+++.+|+|.|+|.|.|..|.......|.+
T Consensus 297 ~~~~~~g~~-~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~ 343 (475)
T 1iga_A 297 PERDLCGCY-SVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSK 343 (475)
T ss_pred ceECCCCCE-EEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeec
Confidence 001111 13457999999999999999999999998655555543
No 283
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.76 E-value=1.2e-17 Score=149.80 Aligned_cols=164 Identities=14% Similarity=0.238 Sum_probs=113.9
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CEE---c---c-------------CCCcEEEccCC-----cEEEccCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GNI---I---G-------------SGGRRKIFENG-----NLLISPVSRD 53 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~~---i---~-------------~~~~~~~~~~g-----~L~i~~v~~~ 53 (626)
|.+|++|+|.|.+.+.+ .+.|.|+|. +.. + . ..+|+.+..++ +|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 91 (221)
T 3m8o_H 12 VQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSD 91 (221)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGG
T ss_pred EcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHH
Confidence 57899999999998754 579999973 211 1 0 13677776543 5999999999
Q ss_pred CCEEEEEEEEcCC--CCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEecc
Q psy12061 54 DSGIYSCTATNVH--GMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGN 126 (626)
Q Consensus 54 d~G~Y~C~a~n~~--g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~ 126 (626)
|+|.|.|.+.+.. ......+.|.|.. +|.+....+... ..|+.++|.|.+.+ .|...+.+.|+++|..+..
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~ 169 (221)
T 3m8o_H 92 DTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTA 169 (221)
T ss_dssp GCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEE
T ss_pred HCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEECce
Confidence 9999999999874 2334456777752 344432333333 78999999999998 5541357899999987742
Q ss_pred ccCCc---cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 127 MDLNE---LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 127 ~~~~~---~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
..... .....+.. .+.|.|......|.|.|+|.|.+..+..
T Consensus 170 ~~~~~~~~~~~~~~~~-~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 170 RNFPPSQDASGDLYTT-SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EECCCEECSSSSCEEE-EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred EEcCceeeCCCCcEEE-EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 21100 01122222 2469999999999999999999987654
No 284
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=158.21 Aligned_cols=178 Identities=17% Similarity=0.268 Sum_probs=111.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEE---cc--C------------CCcEEEc-----cCCcEEEccCCCCCCEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNI---IG--S------------GGRRKIF-----ENGNLLISPVSRDDSGI 57 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~---i~--~------------~~~~~~~-----~~g~L~i~~v~~~d~G~ 57 (626)
|.+|++|+|.|.+.+.|.+.|.|+|. +.. +. . .+|.... .+.+|.|.+++.+|+|.
T Consensus 14 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~ 93 (259)
T 3omz_A 14 RQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSGV 93 (259)
T ss_dssp EETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCEE
T ss_pred ecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCEE
Confidence 56899999999999999999999982 211 10 0 0122221 12369999999999999
Q ss_pred EEEEEEcCCCC---ceeeEEEEEEeC----------------CceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEE
Q psy12061 58 YSCTATNVHGM---DESKGRLIVLHG----------------PSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIW 117 (626)
Q Consensus 58 Y~C~a~n~~g~---~~~~~~l~v~~~----------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W 117 (626)
|.|.|.|..+. ....+.|.|... +..+...|....+.+|++++|.|.+.+. +. ..+.|
T Consensus 94 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~--~~v~W 171 (259)
T 3omz_A 94 YYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWS--YYIFW 171 (259)
T ss_dssp EEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSS--CEEEE
T ss_pred EEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCC--ceEEE
Confidence 99999998762 344577888763 2344556778999999999999998875 44 36699
Q ss_pred eeCC--EEeccc-----cCCccCCCeeEe------cCCeEEEeecCCCCCEeEEEEEEeCC---Cc--eEEEEEEEEeCC
Q psy12061 118 THNG--VRIGNM-----DLNELETPNINI------DGGLLEITNASFADAGEYECVVKSTV---GK--ISTKTTVIVEGP 179 (626)
Q Consensus 118 ~~~~--~~~~~~-----~~~~~~~~~~~~------~~~~l~i~~~~~~d~g~Y~C~a~n~~---g~--~~~~~~l~v~~~ 179 (626)
+|.+ ..+... ........++.. ....|.|.+++.+|+|.|+|.+.+.. +. ......|.|...
T Consensus 172 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~fg~GT~l~v~~~ 251 (259)
T 3omz_A 172 YKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLIFGKGTRVTVEPR 251 (259)
T ss_dssp EEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCEECCCEEEEEEC-
T ss_pred eeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceEECCCCEEEEeeC
Confidence 9843 111100 000000123332 23569999999999999999998532 21 233456666654
Q ss_pred CC
Q psy12061 180 PG 181 (626)
Q Consensus 180 P~ 181 (626)
+.
T Consensus 252 ~~ 253 (259)
T 3omz_A 252 SQ 253 (259)
T ss_dssp --
T ss_pred cc
Confidence 43
No 285
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.75 E-value=7.2e-19 Score=158.72 Aligned_cols=161 Identities=17% Similarity=0.245 Sum_probs=107.8
Q ss_pred CCCCceEEEEeeeCCC---CCC-eeEEEeCCEEccCCC--cEEEccC------CcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAA---PKP-KFVWKKDGNIIGSGG--RRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~---p~p-~i~W~~~~~~i~~~~--~~~~~~~------g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|.+.|. |.+ .|.|+|++..+.... ......+ .+|.|.+++.+|+|.|+|.|.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 5689999999999887 777 999999887664211 0111122 369999999999999999999998864
Q ss_pred eeeEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCe--
Q psy12061 70 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGL-- 143 (626)
Q Consensus 70 ~~~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~-- 143 (626)
.....+ .+..+|.+...++... ...|+.++|.|.+.+.+++.++|.|+|||..+..... .......++.
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~----~~~~~~~dgt~~ 183 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKN----TPPTMDTDGSYF 183 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEE----CCCEECTTSCEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCcee----cCceECCCCCEE
Confidence 332222 2334565544433322 2358899999999996555578899999998854311 0011123333
Q ss_pred ----EEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 144 ----LEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 144 ----l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
|.|......|.|.|+|.|.|....
T Consensus 184 ~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 184 LYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 444443334699999999997654
No 286
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.75 E-value=5e-18 Score=158.85 Aligned_cols=179 Identities=13% Similarity=0.183 Sum_probs=119.8
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc-----------------cCCCcEEEcc-----CCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII-----------------GSGGRRKIFE-----NGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i-----------------~~~~~~~~~~-----~g~L~i~~v~~~d~ 55 (626)
+.+|++++|.|.+.+.| .+.|.|+|+. ..+ ...+|+.+.. +.+|.|.+++.+|+
T Consensus 34 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 113 (291)
T 2gki_A 34 VKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSEDS 113 (291)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGGGC
T ss_pred ecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHHHC
Confidence 57899999999999887 5799999942 211 0125555543 23699999999999
Q ss_pred EEEEEEEEcCC-CC----ceeeEEEEEEeC---------------CceeeeCCCceEEecCCcEEEEEEecccCCcc---
Q psy12061 56 GIYSCTATNVH-GM----DESKGRLIVLHG---------------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLD--- 112 (626)
Q Consensus 56 G~Y~C~a~n~~-g~----~~~~~~l~v~~~---------------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~--- 112 (626)
|.|.|.+.|.. |. ....+.|.|..+ +..+...|..+.+.+|++++|.|.+.+.+.+.
T Consensus 114 G~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 193 (291)
T 2gki_A 114 AVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTR 193 (291)
T ss_dssp EEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTT
T ss_pred EEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcccccccc
Confidence 99999999875 21 123457777651 33455567788999999999999999887652
Q ss_pred -eeEEEeeCC--EEec---ccc--CCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCC
Q psy12061 113 -VAYIWTHNG--VRIG---NMD--LNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGP 179 (626)
Q Consensus 113 -~~i~W~~~~--~~~~---~~~--~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~ 179 (626)
..+.|+|++ .... ... .......++.. ....|.|.+++.+|+|.|+|.|.|..... .....|.|...
T Consensus 194 ~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~ 273 (291)
T 2gki_A 194 KNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHH 273 (291)
T ss_dssp EECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred ceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCEEEEEEee
Confidence 257999963 2111 000 00000123322 22479999999999999999999864322 23445666554
Q ss_pred C
Q psy12061 180 P 180 (626)
Q Consensus 180 P 180 (626)
+
T Consensus 274 ~ 274 (291)
T 2gki_A 274 H 274 (291)
T ss_dssp -
T ss_pred E
Confidence 4
No 287
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.75 E-value=5.7e-18 Score=153.98 Aligned_cols=172 Identities=15% Similarity=0.200 Sum_probs=114.9
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EE---cc--------------CCCcEEEcc-----CCcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---IG--------------SGGRRKIFE-----NGNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~---i~--------------~~~~~~~~~-----~g~L~i~~v~~~d~ 55 (626)
+.+|++|+|.|.+.+. +.+.|.|+|+. .. +. ..+|+.+.. +.+|.|.+++.+|+
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 92 (242)
T 1hxm_B 13 KTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDI 92 (242)
T ss_dssp EETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccC
Confidence 5689999999999885 66799999842 21 10 346777653 23699999999999
Q ss_pred EEEEEEEEcCCC-C------ceeeEEEEEEeC-------CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCC
Q psy12061 56 GIYSCTATNVHG-M------DESKGRLIVLHG-------PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG 121 (626)
Q Consensus 56 G~Y~C~a~n~~g-~------~~~~~~l~v~~~-------p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~ 121 (626)
|.|.|.+.+... . ....+.|.|... |......|....+..|+.++|.|.+.+..+..+.+.|++++
T Consensus 93 G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~ 172 (242)
T 1hxm_B 93 ATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKK 172 (242)
T ss_dssp EEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESS
T ss_pred EEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEEEEcCC
Confidence 999999998641 1 123468888753 32222224444456799999999999863323578999998
Q ss_pred E-EeccccC--CccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 122 V-RIGNMDL--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 122 ~-~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
. .+..... .......+. ..+.|.|..... + |.|+|.|.|..+.......+.+
T Consensus 173 ~~~l~~~~~~~~~~~~~~~~-~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 173 SNTILGSQEGNTMKTNDTYM-KFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp SCCCCCCEECCCEECSSSEE-EEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CEeecCccccceecCCCcEE-EEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 7 5532210 000111111 124688877764 4 9999999999987655555555
No 288
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.75 E-value=9e-19 Score=167.27 Aligned_cols=162 Identities=17% Similarity=0.242 Sum_probs=110.8
Q ss_pred CCCCceEEEEeeeCCC-CCC---eeEEEeCC-EEccCCCcEEE-c------cCCcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAA-PKP---KFVWKKDG-NIIGSGGRRKI-F------ENGNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p---~i~W~~~~-~~i~~~~~~~~-~------~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|.+.|. |.| .|.|+|++ ..+........ . .+++|.|.+++.+|+|.|+|.|.|..+..
T Consensus 125 v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 125 LFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred hccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC
Confidence 3579999999999886 566 99999964 55543222221 1 22369999999999999999999987543
Q ss_pred eeeEEEEEE------eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc-----cCCCeeE
Q psy12061 70 ESKGRLIVL------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE-----LETPNIN 138 (626)
Q Consensus 70 ~~~~~l~v~------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~-----~~~~~~~ 138 (626)
. +.+.|. .+|.+...++.... ..|+.++|.|.+.+.+++.+.|.|+|||..+....... ...+.+
T Consensus 205 ~--~~~~v~~~~~~~~~P~v~~~~~~~~~-~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~- 280 (323)
T 2wqr_A 205 A--LMRSTTKTSGPRAAPEVYAFATPEWP-GSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGF- 280 (323)
T ss_dssp C--EEEEECCCCSCCBCCEEEEEECCCCT-TCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSE-
T ss_pred C--eeeEEEccCCCCCCCEEEEeCCChHH-hcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcE-
Confidence 2 233332 34544433332222 23999999999998655556789999999986532100 000111
Q ss_pred ecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 139 IDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 139 ~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
...+.|.|..+..+|+|.|+|.|.|..+.
T Consensus 281 ~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 281 FVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 12347999999999999999999998876
No 289
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.75 E-value=1.7e-17 Score=149.56 Aligned_cols=173 Identities=14% Similarity=0.243 Sum_probs=113.5
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--E---Ec-------------cCCCcEEEccC---C--cEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--N---II-------------GSGGRRKIFEN---G--NLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~---~i-------------~~~~~~~~~~~---g--~L~i~~v~~~d~G 56 (626)
|.+|++|+|.|.+.+.+ .+.|.|+|.. . .+ ...+|+.+..+ + +|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 91 (232)
T 1dn0_B 12 LKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTA 91 (232)
T ss_dssp ECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred EeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcccCE
Confidence 57899999999998875 5799999842 2 11 01367776542 2 7999999999999
Q ss_pred EEEEEEEcCC--CC----ceeeEEEEEEe----CCceeeeCCCceEEecC-CcEEEEEEeccc-CCcceeEEEee-CCEE
Q psy12061 57 IYSCTATNVH--GM----DESKGRLIVLH----GPSYYEQLPPKITIAAH-RNLQLRCSAHTE-ELLDVAYIWTH-NGVR 123 (626)
Q Consensus 57 ~Y~C~a~n~~--g~----~~~~~~l~v~~----~p~~~~~~~~~~~v~~g-~~~~l~C~~~~~-p~p~~~i~W~~-~~~~ 123 (626)
.|.|.+.+.. +. ....+.|.|.. +|.+....|.. .+..| +.++|.|.+.+. |.| +.+.|++ ||..
T Consensus 92 ~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~-~~~~g~~~v~L~C~~~g~~P~p-~~v~W~~~~g~~ 169 (232)
T 1dn0_B 92 VYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCE-NSPSDTSSVAVGCLAQDFLPDS-ITFSWKYKNNSD 169 (232)
T ss_dssp EEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEBSSC-CEEEEEETTSCE
T ss_pred EEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEecccc-ccCCCCCcEEEEEEEEEEeCCC-eEEEEEcCCCCc
Confidence 9999998422 22 22356888865 24443322322 34578 999999999986 543 5789999 9988
Q ss_pred ecccc-CCc-cCCCeeEecCCeEEEeecCC--CCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 124 IGNMD-LNE-LETPNINIDGGLLEITNASF--ADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 124 ~~~~~-~~~-~~~~~~~~~~~~l~i~~~~~--~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
+.... ... .....+. ..+.|.|..... .|.|.|+|.|.|..+.......+.+.
T Consensus 170 l~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 170 ISSTRGFPSVLRGGKYA-ATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp ECCEEECCCEEETTEEE-EEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred eeeEEECCccccCCcEE-EEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 75410 000 0012222 235788888876 78999999999999987666655543
No 290
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.75 E-value=7.2e-16 Score=156.46 Aligned_cols=169 Identities=18% Similarity=0.249 Sum_probs=109.4
Q ss_pred CCCCceEEEEeeeCCCCC----CeeEEEeC--CEE---c-c------------CCCcEEEccC-----CcEEEccCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPK----PKFVWKKD--GNI---I-G------------SGGRRKIFEN-----GNLLISPVSRDD 54 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~----p~i~W~~~--~~~---i-~------------~~~~~~~~~~-----g~L~i~~v~~~d 54 (626)
|.+|++++|.|.+.+.+. +.|.|+|. |.. | . ..+|+.+..+ .+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 91 (512)
T 1zvo_C 12 VKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSAAD 91 (512)
T ss_pred EcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCHHH
Confidence 578999999999987643 68999985 321 1 0 1357776542 369999999999
Q ss_pred CEEEEEEEEcCCC----------C---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEE
Q psy12061 55 SGIYSCTATNVHG----------M---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIW 117 (626)
Q Consensus 55 ~G~Y~C~a~n~~g----------~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W 117 (626)
+|.|.|.+.+..+ . ....+.|.|.. +|.+....+.......|+.++|.|.+.+..+..+++.|
T Consensus 92 sg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v~W 171 (512)
T 1zvo_C 92 TAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTW 171 (512)
T ss_pred CEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEEEE
Confidence 9999999998753 1 12446788864 34333222222212346899999999987332357799
Q ss_pred eeCCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 118 THNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 118 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
++++.......... ...+.+. ..+.|.|...... .|.|+|.|.|..|.....+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~ 226 (512)
T 1zvo_C 172 YMGTQSQPQRTFPEIQRRDSYYM-TSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEI 226 (512)
T ss_pred EcCcccCceEecCceecCCCCEE-EEEEEEEcHHHcC-CceEEEEEEeCCCCceEEE
Confidence 99764321110000 0011111 1245888887776 8999999999998765544
No 291
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=6.6e-18 Score=135.57 Aligned_cols=120 Identities=23% Similarity=0.286 Sum_probs=100.8
Q ss_pred EEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcccccee
Q psy12061 468 KVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI 547 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~ 547 (626)
+|+|.|..|.|+.|..+.++|.+..|+.+|.++++...+.+++.|+|++|.....++.|.+|.|+|+..+... ...
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~----~~~ 78 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRG----EME 78 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSC----CEE
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCc----ceE
Confidence 5789999999999999999999999988899999999999999999995333337899999999988765442 223
Q ss_pred eecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 548 IPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 548 ~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
......+.+.|.+|.|++.|.|+|+|+|..|.|++|+++ .++|.
T Consensus 79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~ 122 (124)
T 2ed9_A 79 TLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWY-TAETP 122 (124)
T ss_dssp EECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCE-EEECC
T ss_pred EecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE-EEECC
Confidence 356778899999999999999999999999999999764 46554
No 292
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.75 E-value=4.2e-18 Score=158.01 Aligned_cols=164 Identities=20% Similarity=0.266 Sum_probs=112.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEe--CCEE------------ccCC---C-cEEEcc----CCcEEEccCCCCCCEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKK--DGNI------------IGSG---G-RRKIFE----NGNLLISPVSRDDSGIYS 59 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~--~~~~------------i~~~---~-~~~~~~----~g~L~i~~v~~~d~G~Y~ 59 (626)
|.+|++++|.|.+.+ +.+.|.|+| .+.. .... + |+.+.. +.+|.|.+++.+|+|.|.
T Consensus 39 v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 117 (270)
T 3qib_D 39 KGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYL 117 (270)
T ss_dssp EETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEE
T ss_pred EcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEE
Confidence 568999999999976 778999998 2211 1001 1 666553 337999999999999999
Q ss_pred EEEEcCCC----CceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC
Q psy12061 60 CTATNVHG----MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 60 C~a~n~~g----~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 129 (626)
|.+.+..+ .....+.|.|.. +|.+...++....+..|+.++|.|.+.+.+++.+.+.|+|||..+.....
T Consensus 118 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~ 197 (270)
T 3qib_D 118 CASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVC 197 (270)
T ss_dssp EEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred EEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcc
Confidence 99997432 233446788876 45544444555556679999999999994433457899999999865321
Q ss_pred Cc---------cCCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCc
Q psy12061 130 NE---------LETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGK 167 (626)
Q Consensus 130 ~~---------~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~ 167 (626)
.. .....+. ....|.|......| .|.|+|.+.|....
T Consensus 198 ~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 198 TDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp ECSSCEESCTTSSSCCEE-EEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred cccccccccccCCCCCEE-EEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 00 0111111 22457888877777 99999999987654
No 293
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.75 E-value=1.3e-16 Score=139.24 Aligned_cols=180 Identities=17% Similarity=0.176 Sum_probs=129.0
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEe
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAY 472 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~ 472 (626)
+|+++++...+.. ..|.|+++...+ +.+ .|.|+|...+ .+.. .........+.|.+|.+++.|.++|+|.
T Consensus 4 ~P~nv~~~s~n~~-~iL~W~pp~~~~----~~v-~Y~V~y~~~~--~w~~--~c~~~~~~~c~lt~l~~~~~Y~~rV~A~ 73 (201)
T 3lqm_A 4 PPENVRMNSVNFK-NILQWESPAFAK----GQL-TFTAQYLSYR--IFQD--KCMQTTLTECDFSSLSKYGDHTLRVRAE 73 (201)
T ss_dssp CCEEEEEEEETTE-EEEEEECCCCSS----SCC-EEEEEEEETT--EEEE--EEEEESSSEEECTTSCSSSCEEEEEEEE
T ss_pred CCcccEEEEECCc-eEEEECCCCCCC----CCe-EEEEEEEECC--Cccc--CcCccCCCEEECCCCccCCCEEEEEEEe
Confidence 7899999876654 679999987644 334 4999997652 2221 2223345668899999999999999999
Q ss_pred eCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCC-C---------ceeeEEEEEEEeccCCcc
Q psy12061 473 NNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE-E---------PIIGYKVRVWEVDQDMSR 542 (626)
Q Consensus 473 ~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~-~---------~i~~Y~i~~~~~~~~~~~ 542 (626)
+..|.|+++.. .|........+|| .+.+. ...+++.|.|.+ |...+ + .+..|.|.|+..+....
T Consensus 74 ~~~~~S~~s~~-~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~--P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~- 147 (201)
T 3lqm_A 74 FADEHSDWVQI-TFSPVDDTIIGPP-GMQVE-VLADCLHMRFLA--PKIENEYETWTMKNVYNSWTYNVQYWKQGTDEK- 147 (201)
T ss_dssp ETTEECCCEEE-EECHHHHSBCCCC-EEEEE-EETTEEEEEEEC--CEEECSSCEEEHHHHCTTCEEEEEEEETTCCCC-
T ss_pred cCCCcCcceee-eeeecccCeeCCC-EEEEE-EeCCEEEEEEcC--CCccCCCcccCHHHhCCceEEEEEEEECCCCcE-
Confidence 99888888754 4433222334566 67775 456899999995 43222 3 36799999988654321
Q ss_pred ccceeeecCccceEEecCCCCCceEEEEEEEEec--CCCCCCCCCcEEEeecc
Q psy12061 543 ANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN--GGDGRMSSPAITFQMGE 593 (626)
Q Consensus 543 ~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~--~G~g~~s~~~~~~~~~~ 593 (626)
.........+.|.+|+|++.|.|+|+|.+. .|.|.+|.+ .++++.+
T Consensus 148 ----~~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~-~c~~T~~ 195 (201)
T 3lqm_A 148 ----FQITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEP-VCEQTTH 195 (201)
T ss_dssp ----EEECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCC-EEEECCC
T ss_pred ----EEEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCC-EeEEeCC
Confidence 123346678999999999999999999997 689999965 5677664
No 294
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.74 E-value=2.6e-18 Score=132.53 Aligned_cols=80 Identities=28% Similarity=0.538 Sum_probs=73.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|+|.|+|||.+|..+.|+.+..++ +|.|.+++.+|+|.|+|.|.|..|...+.+.|.|.
T Consensus 25 v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 25 VVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEE
Confidence 578999999999999999999999999999988898887665 69999999999999999999999999999999997
Q ss_pred eCC
Q psy12061 79 HGP 81 (626)
Q Consensus 79 ~~p 81 (626)
.+|
T Consensus 105 ~pP 107 (107)
T 3knb_B 105 EPP 107 (107)
T ss_dssp C--
T ss_pred cCC
Confidence 665
No 295
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.74 E-value=1.3e-17 Score=148.58 Aligned_cols=162 Identities=16% Similarity=0.284 Sum_probs=108.9
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EEc----------------cCCCcEEEccC-----CcEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NII----------------GSGGRRKIFEN-----GNLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~i----------------~~~~~~~~~~~-----g~L~i~~v~~~d~G 56 (626)
+.+|++|+|.|.+.+.| .+.|.|+|+. ..+ ...+|+.+..+ .+|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 91 (215)
T 1c5d_H 12 VQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTA 91 (215)
T ss_dssp ECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred ecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCE
Confidence 57899999999999875 4799999852 211 01357776532 27999999999999
Q ss_pred EEEEEEEcCCCC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEeeCCEEecccc
Q psy12061 57 IYSCTATNVHGM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTHNGVRIGNMD 128 (626)
Q Consensus 57 ~Y~C~a~n~~g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~ 128 (626)
.|.|.+.|..+. ....+.|.|.. +|.+...+|. ..+..|+.++|.|.+.+. |.| +.+.|+++|..+....
T Consensus 92 ~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p-~~v~W~~~g~~~~~~~ 169 (215)
T 1c5d_H 92 IYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG-CGDTTSSTVTLGCLVKGYFPEP-VTVTWNSGALSSDVHT 169 (215)
T ss_dssp EEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC-SSCCCCSSEEEEEEEEEEBSSC-CEEEEGGGTTCCSCCB
T ss_pred EEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC-hhhccCCcEEEEEEEeeeEcCC-cEEEEccCCccCceEe
Confidence 999999987532 23447888863 3444443333 235789999999999987 654 4779999987643211
Q ss_pred CCccCCCeeEecCCeEE----EeecCCCCCEeEEEEEEeCCCceEEEE
Q psy12061 129 LNELETPNINIDGGLLE----ITNASFADAGEYECVVKSTVGKISTKT 172 (626)
Q Consensus 129 ~~~~~~~~~~~~~~~l~----i~~~~~~d~g~Y~C~a~n~~g~~~~~~ 172 (626)
. .... ..+.+. +......| |.|+|.|.|..|......
T Consensus 170 ~-----~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 170 F-----PAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp C-----CCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred c-----Cccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 0 1111 112221 23444356 999999999988754433
No 296
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.73 E-value=7.2e-18 Score=151.25 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=106.3
Q ss_pred CcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCC
Q psy12061 315 KQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAP 394 (626)
Q Consensus 315 ~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p 394 (626)
..+..+.+|.|+++......+.... ......+++.+|.|++.|.|||+|.|..|.|.+|....+.+....|+.+|
T Consensus 17 ~~~~~Vt~Y~~~~~~~~~~~~~~~~-----~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~ 91 (232)
T 4go6_B 17 GTNVMVTHYFLPPDDAVPSDDDLGT-----VPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAP 91 (232)
T ss_dssp SSEEEECEEECCCC-----------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCC
T ss_pred CCCEEEEEEEEEeeCCCCCcEEEEE-----CCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCC
Confidence 3455677888877544322222111 11334677899999999999999999999999999988888766666455
Q ss_pred CceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccce----------EEEE--ecCc-------cceEE
Q psy12061 395 QGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA----------VYYL--SRTT-------RNWAL 455 (626)
Q Consensus 395 ~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~----------~~~~--~~~~-------~~~~~ 455 (626)
. +.....+.+++.|+|++|...+ |.|.+|.|+|+......... .... .... ...+.
T Consensus 92 ~-~~~~~~~~~sv~l~W~~P~~~~----G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 166 (232)
T 4go6_B 92 C-AIKISKSPDGAHLTWEPPSVTS----GKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNA 166 (232)
T ss_dssp E-EEEEEEETTEEEEEEECCSCCS----SCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTB
T ss_pred e-eeEEecCCCEEEEEEeCCCCCC----CceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEe
Confidence 4 4445578899999999987543 78999999997655432111 0000 0111 11223
Q ss_pred EeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCC
Q psy12061 456 IVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493 (626)
Q Consensus 456 i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p 493 (626)
+.+|.+++.|.|+|+|.|..|.|++|+...+.+....|
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~~~p 204 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDS 204 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC-----
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCCCCC
Confidence 56899999999999999999999998765555444433
No 297
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.9e-17 Score=133.98 Aligned_cols=132 Identities=27% Similarity=0.336 Sum_probs=108.1
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEE-ecCcc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYL-SRTTR 451 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~ 451 (626)
|.|.+|..+.++|.+..|..+|.++++...+.+++.|+|++|..... +|.|.+|.|+|+..+.......... .....
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~--~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 78 (134)
T 2edx_A 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSR--NGVITQYSVAYEAVDGEDRGRHVVDGISREH 78 (134)
T ss_dssp CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTC--SSCEEEEEEEEEESSSSCCCCEEECCCBTTC
T ss_pred CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCC--CCceeEEEEEEEECCCCCcccEEEEeeCCCc
Confidence 67888998999999999987899999999999999999999843222 3779999999987765543322222 24556
Q ss_pred ceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeC
Q psy12061 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN 506 (626)
Q Consensus 452 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~ 506 (626)
..+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+..|+.+|.++++..++
T Consensus 79 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~s 133 (134)
T 2edx_A 79 SSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS 133 (134)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCceeEEEEcc
Confidence 7799999999999999999999999999999999999999987789998776543
No 298
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.73 E-value=2.8e-18 Score=154.57 Aligned_cols=161 Identities=11% Similarity=0.116 Sum_probs=110.2
Q ss_pred CCCceEEEEeeeCCC-CC-C-eeEEEeCCEEc-cCCCcEE-EccCC------cEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 3 GEGGNVTIFCNPEAA-PK-P-KFVWKKDGNII-GSGGRRK-IFENG------NLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~-p~-p-~i~W~~~~~~i-~~~~~~~-~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
.+|++++|.|.+.|. |. | .|.|+|+|..+ ....... ...+| +|.|.+++.+|+|.|+|.|.|..+..
T Consensus 26 ~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~-- 103 (231)
T 2w59_A 26 YISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPL-- 103 (231)
T ss_dssp HTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSS--
T ss_pred ccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCC--
Confidence 589999999999985 74 5 99999999887 4322222 22334 49999999999999999999987653
Q ss_pred eEEEEEE------eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc---c----------
Q psy12061 72 KGRLIVL------HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---L---------- 132 (626)
Q Consensus 72 ~~~l~v~------~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~---~---------- 132 (626)
...+.|. .+|.+...++.... ..|..++|.|.+.+.+++.++|.|+|||..+....... .
T Consensus 104 ~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~ 182 (231)
T 2w59_A 104 PLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAG 182 (231)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC--
T ss_pred ceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccC
Confidence 3344442 34544433333222 23567999999999755556889999999986542100 0
Q ss_pred CC-CeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 133 ET-PNINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 133 ~~-~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.+ +.+ ...+.|.|......|.|.|+|.|.|....
T Consensus 183 ~d~gt~-~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 183 GDGDTF-FVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp -CCCCE-EEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred CCCCeE-EEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 00 011 11245778887778899999999998654
No 299
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=155.52 Aligned_cols=166 Identities=17% Similarity=0.235 Sum_probs=113.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EE---c-----------c---CCCcEEEccC----CcEEEccCCCCCCEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I-----------G---SGGRRKIFEN----GNLLISPVSRDDSGIY 58 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---i-----------~---~~~~~~~~~~----g~L~i~~v~~~d~G~Y 58 (626)
|.+|++|+|.|.+.+.|.+.|.|+|++ .. + . ..+|+.+..+ .+|.|.+++.+|+|.|
T Consensus 36 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 115 (279)
T 2wbj_D 36 SKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFY 115 (279)
T ss_dssp EETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEEE
T ss_pred ecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEEE
Confidence 568999999999998888999999953 11 1 0 1357777642 2799999999999999
Q ss_pred EEEEEcCCC----C--ceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecc
Q psy12061 59 SCTATNVHG----M--DESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126 (626)
Q Consensus 59 ~C~a~n~~g----~--~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 126 (626)
.|.|.|..+ . ....+.|.|.. +|.+....|....+..|+.++|.|.+.+.+++.++|.|+|||..+..
T Consensus 116 ~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 195 (279)
T 2wbj_D 116 ICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 195 (279)
T ss_dssp EEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCT
T ss_pred EEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCC
Confidence 999999532 1 12346788865 34443333444445579999999999997554467899999998865
Q ss_pred ccCCc---------cCCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCCce
Q psy12061 127 MDLNE---------LETPNINIDGGLLEITNASFAD-AGEYECVVKSTVGKI 168 (626)
Q Consensus 127 ~~~~~---------~~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g~~ 168 (626)
..... .....+. ..+.|.|......| .|.|+|.|.|.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~-~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 196 GVSTDPQPLKEQPALNDSRYS-LSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp TEEECSSCEESSTTSTTCCEE-EEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred CcccccccccccccCCCCcEE-EEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 32100 0011111 12347777776654 778999999976543
No 300
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.72 E-value=1.7e-17 Score=172.32 Aligned_cols=164 Identities=18% Similarity=0.272 Sum_probs=120.2
Q ss_pred CCCCceEEEEeee-CCCCCCeeEEEeCCEEcc------------CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNP-EAAPKPKFVWKKDGNIIG------------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~-~g~p~p~i~W~~~~~~i~------------~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|++++|.|.+ .+.|.+.|.|+|++..+. ..+|..+..+++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 378 ~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~ 457 (581)
T 3o3u_N 378 ARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGK 457 (581)
T ss_dssp EETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECTTSC
T ss_pred eecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcCCCc
Confidence 4689999999999 888999999999876321 135777888889999999999999999999999998
Q ss_pred c-eeeEEEEEEeCCceeeeCCCceEEecCCc-EEEEEEeccc-CCcceeEEEeeCCEEeccccCCccC--------CCee
Q psy12061 69 D-ESKGRLIVLHGPSYYEQLPPKITIAAHRN-LQLRCSAHTE-ELLDVAYIWTHNGVRIGNMDLNELE--------TPNI 137 (626)
Q Consensus 69 ~-~~~~~l~v~~~p~~~~~~~~~~~v~~g~~-~~l~C~~~~~-p~p~~~i~W~~~~~~~~~~~~~~~~--------~~~~ 137 (626)
. ...+.|.|..+|......+....+..|.. +.|.|.+.+. |.| +|.|++||..+....-.... ....
T Consensus 458 ~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~--~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~ 535 (581)
T 3o3u_N 458 ETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAG--TLSWHLDGKPLVPNEKGVSVKEQTRRHPETGL 535 (581)
T ss_dssp EEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBSCC--EEEEEETTEECCTTSTTEEEEEEEEECTTTCC
T ss_pred eeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCCCC--eEEEEECCEECCCCCCeEEEEeeeEEcCCCce
Confidence 7 67789999886654333333334556555 4679999984 766 56999999998753210000 0000
Q ss_pred EecCCeEEEeecCCC-CCEeEEEEEEeCCCc
Q psy12061 138 NIDGGLLEITNASFA-DAGEYECVVKSTVGK 167 (626)
Q Consensus 138 ~~~~~~l~i~~~~~~-d~g~Y~C~a~n~~g~ 167 (626)
-.-.+.|.|.+++.. +.|.|+|.|.|..+.
T Consensus 536 y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 536 FTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred EEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 111246999998844 488999999998653
No 301
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.72 E-value=9.8e-18 Score=152.72 Aligned_cols=163 Identities=16% Similarity=0.276 Sum_probs=97.4
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeCC--EE---c--------------cCCCcEEEccC-----CcEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKDG--NI---I--------------GSGGRRKIFEN-----GNLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~~--~~---i--------------~~~~~~~~~~~-----g~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+.| .+.|.|+|.. .. | ...+|+.+..+ .+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (257)
T 3bn9_D 12 VKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAEDT 91 (257)
T ss_dssp ECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGGGC
T ss_pred EcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChhhC
Confidence 57899999999999876 6799999843 11 1 01357776542 2699999999999
Q ss_pred EEEEEEEEcCCCC-------------ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEE
Q psy12061 56 GIYSCTATNVHGM-------------DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIW 117 (626)
Q Consensus 56 G~Y~C~a~n~~g~-------------~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W 117 (626)
|.|.|.+.|..|. ....+.|.|.. +|.+....|. ..+..|+.++|.|.+.+. |.| +.|.|
T Consensus 92 G~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~-~~~~~g~~v~L~C~~~g~~P~p-i~v~W 169 (257)
T 3bn9_D 92 AVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEP-VTVSW 169 (257)
T ss_dssp EEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC------------CCCEEEEEBSSC-CEEEE
T ss_pred EEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCc-ccccCCCcEEEEEEEeeEECCC-cEEEE
Confidence 9999999997651 11346888864 3444433333 346789999999999986 544 57899
Q ss_pred eeCCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 118 THNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 118 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
++++..+....... ...+.+. ..+.|.|.++...| |.|+|.|.|.....
T Consensus 170 ~k~g~~~~~~~~~~~~~~~g~y~-~~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 170 NSGALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp TTTTCCSSCEECCCEECTTSCEE-EEEECCCC--------CEEEEEEEGGGTE
T ss_pred eeCCCcCCcEecCCeEcCCCCEE-EEEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 99987643211000 0011111 12457788877778 99999999976543
No 302
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=9.8e-17 Score=128.20 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=92.8
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEe-eeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccc
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTL 554 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~-~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~ 554 (626)
|.|++|..+.++|.+++|+.+|.++++. ..+.+++.|+|++|+....+|.|.+|.|+|+..+..... ........+.+
T Consensus 1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~ 79 (124)
T 2dbj_A 1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISK-ELLEEVGQNGS 79 (124)
T ss_dssp CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEE-EEEEEEESTTS
T ss_pred CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCcc-ceEEEeCCCcc
Confidence 6788899999999999998899999988 578899999999654477899999999998654332111 11222346778
Q ss_pred eEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 555 DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 555 ~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
.+.|.+|.|++.|.|+|+|+|.+|.|++|.++ .+++.+
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~-~~~T~~ 117 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPV-KIFIPA 117 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCE-EEECCC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCE-EEEcCC
Confidence 99999999999999999999999999999764 466654
No 303
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=152.51 Aligned_cols=164 Identities=16% Similarity=0.189 Sum_probs=111.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeC--CEE---c-c-C----------CC-cEEEccCCc--EEEccCCCCCCEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKD--GNI---I-G-S----------GG-RRKIFENGN--LLISPVSRDDSGIYSCT 61 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~--~~~---i-~-~----------~~-~~~~~~~g~--L~i~~v~~~d~G~Y~C~ 61 (626)
|.+|++|+|.|.+.+.+.+.|.|+|. +.. + . . .+ |+.+..++. |.|.+++.+|+|.|.|.
T Consensus 13 v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (253)
T 3to4_D 13 VPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQGRTLYCT 92 (253)
T ss_dssp EESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSCEEEEEE
T ss_pred EeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhCeEEEEE
Confidence 56899999999999999999999982 111 1 0 0 12 666665544 99999999999999999
Q ss_pred EEcCCC------CceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC
Q psy12061 62 ATNVHG------MDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 62 a~n~~g------~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 129 (626)
+.+..+ .....+.|.|.. +|.+...++....+..|+.++|.|.+.+.+++.+.+.|+|||..+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~ 172 (253)
T 3to4_D 93 SSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVS 172 (253)
T ss_dssp EECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEE
T ss_pred EecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCcee
Confidence 997654 122345777763 34433333334344467999999999995444468899999999865321
Q ss_pred Ccc---------CCCeeEecCCeEEEeecCCCC-CEeEEEEEEeCCC
Q psy12061 130 NEL---------ETPNINIDGGLLEITNASFAD-AGEYECVVKSTVG 166 (626)
Q Consensus 130 ~~~---------~~~~~~~~~~~l~i~~~~~~d-~g~Y~C~a~n~~g 166 (626)
... ....+. -.+.|.|......| .|.|+|.|.+..-
T Consensus 173 ~~~~~~~~~~~~~~g~~~-~~s~l~i~~~~~~d~~~~ytC~v~h~~l 218 (253)
T 3to4_D 173 TDPQPLKEQPALNDSRYA-LSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (253)
T ss_dssp ECSSCEESSTTCTTCCEE-EEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred cccccccccccCCCCCEE-EEEEEEECHHHhccCCCEEEEEEEeCCC
Confidence 000 011111 12467788777777 7799999998643
No 304
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=1.7e-16 Score=129.48 Aligned_cols=118 Identities=25% Similarity=0.293 Sum_probs=95.0
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.+..|+.+|.++++...+.+++.|+|++++..+.++.|.+|.|+|+..+................+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 2edx_A 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSS 80 (134)
T ss_dssp CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSE
T ss_pred CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccE
Confidence 67889999999999999988899999998899999999995433778899999999988766543221111122567889
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.+|.|++.|.|+|+|+|..|.|++|.++. +++...
T Consensus 81 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~-~~T~~~ 118 (134)
T 2edx_A 81 WDLVGLEKWTEYRVWVRAHTDVGPGPESSPVL-VRTDED 118 (134)
T ss_dssp EEEESCCTTCEEEEEEEEEETTBCCCCCCCEE-EECCCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEE-eecCCC
Confidence 99999999999999999999999999997654 555543
No 305
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.71 E-value=2e-14 Score=133.55 Aligned_cols=272 Identities=13% Similarity=0.075 Sum_probs=170.6
Q ss_pred CCCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEE
Q psy12061 288 YQAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQ 367 (626)
Q Consensus 288 ~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~ 367 (626)
..||.++++...+...+.|+|++++..........|.+.|+..+...|..... .......|..+ |.++|+
T Consensus 12 ~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~~~t--------~~~~~~~L~~~--~~~rVr 81 (317)
T 3qt2_A 12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRIT--------ESKAVTILHMG--FSASVR 81 (317)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEESSS--------EEEEECCCTTC--EEEEEE
T ss_pred cCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEeecc--------ccccccccCCC--eEEEEE
Confidence 36899999987778999999999554443344678999999887777875433 12235567665 888888
Q ss_pred EecCCCC-CCCCccEEEEc--cCCCCCCCCCceEEEeee-----------cceEEEEeeeccccccccceeeEEEEEEEE
Q psy12061 368 AINDVGP-GPESEVVTIFS--AEDMPQVAPQGVFSRGFN-----------STAINVTWNPIELIRENIRGRLIGHRIKYW 433 (626)
Q Consensus 368 a~n~~g~-~~~s~~~~~~t--~~~~p~~~p~~~~~~~~~-----------~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~ 433 (626)
+....|. +.+|.++.... .++.|+..|.++.+...+ ...+..+|++...... -..|.+.|+
T Consensus 82 t~~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~~~-----~t~Y~L~y~ 156 (317)
T 3qt2_A 82 TILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDAPE-----DTQYFLYYR 156 (317)
T ss_dssp EEEECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTCCT-----TCEEEEEEE
T ss_pred EEECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCCCCC-----CeeEEEEEE
Confidence 8776553 23455554332 335566688999988776 4789999998553221 236999987
Q ss_pred ecCCCccceE-EEEecC-ccceEEEeCCc----cCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCC
Q psy12061 434 KEDNPEETAV-YYLSRT-TRNWALIVGLQ----PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINP 507 (626)
Q Consensus 434 ~~~~~~~~~~-~~~~~~-~~~~~~i~~L~----p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~ 507 (626)
..+.. .... ...... ......+.... ....|.|.|.+.+..+.-. +....+.....+.+.||.+|++... .
T Consensus 157 ~~~~~-~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~-s~~~~~~l~~iVkp~PP~nL~v~~~-~ 233 (317)
T 3qt2_A 157 YGSWT-EECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIR-PFDQLFALHAIDQINPPLNVTAEIE-G 233 (317)
T ss_dssp ETTEE-EECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBC-CEEEEEEHHHHBCCCCCEEEEEEEE-T
T ss_pred eCCCC-eeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCcccc-ccceEEEHHHcCcCCCCceeEEEEe-C
Confidence 65421 1111 112221 22345565543 2467888888765443311 2223455555566678999998854 5
Q ss_pred CEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecC---CCCCCCC
Q psy12061 508 TTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG---GDGRMSS 584 (626)
Q Consensus 508 ~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~---G~g~~s~ 584 (626)
+.+.|+|++|.... ...-..|+|+|+....... ..... ..+.+.+ +|.|++.|.|+|||.... +.|.+|+
T Consensus 234 ~~l~v~W~~P~~~~-~~~~L~Yevryr~~~~~~~---~~~~~--~~~~~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSe 306 (317)
T 3qt2_A 234 TRMSIQWEKPVSAF-PIHCFDYEVKIHNTRNGYL---QIEKL--MTNAFIS-IIDDLSKYDVQVRAAVSSMCREAGLWSE 306 (317)
T ss_dssp TEEEEEEECCSSSS-CGGGEEEEEEEEETTTCCE---EEEEE--SSSEEEE-ECCTTCCEEEEEEEEECTTTSSCCCCCC
T ss_pred CcEEEEECCCCccc-ccCceEEEEEEEeCCCCcc---eEEEE--eeeEEEe-ecCCCCEEEEEEEEeecCCCCCCCCcCC
Confidence 79999999533222 2233579999987543321 11112 3355666 599999999999999653 3444443
No 306
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.70 E-value=7.9e-17 Score=126.49 Aligned_cols=110 Identities=26% Similarity=0.348 Sum_probs=89.4
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.+++|..+|.++++.. +.+++.|+|++|+....||.|.+|+|.|+..+.... .....+.+.
T Consensus 1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~-----~~~~~~~~~ 74 (117)
T 1wj3_A 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV-----QVLNTNKTS 74 (117)
T ss_dssp CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC-----EEEEESSSE
T ss_pred CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCC-----eEEeCCCcE
Confidence 67888999999999999998999998876 888999999965557889999999999987654321 222334567
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.+. |.+++.|.|+|+|+|.+|.|++|+++ .++|..
T Consensus 75 ~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v-~~~T~~ 110 (117)
T 1wj3_A 75 AELV-LPIKEDYIIEVKATTDGGDGTSSEQI-RIPRIT 110 (117)
T ss_dssp EEEE-CCCSSCEEEEEEEEESSCCCCBCCCE-EECCCC
T ss_pred EEEE-CCCCCEEEEEEEEECCCccCCCCCCE-EEEcCC
Confidence 7787 99999999999999999999999764 455543
No 307
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=2.2e-16 Score=125.33 Aligned_cols=114 Identities=19% Similarity=0.332 Sum_probs=93.3
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.++.|+.+|.++++...+.+++.|+|+ +|.. +.|.+|.|+|+..+.... .........+.+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~--~p~~--g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~ 75 (119)
T 2ee2_A 1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWE--HVLE--KIVESYQIRYWAAHDKEE-AANRVQVTSQEYS 75 (119)
T ss_dssp CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECC--CCSC--TTCCEEEEEEEESSSCGG-GCEEEEEETTCSE
T ss_pred CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEec--CCCC--CccceEEEEEEECCCccc-CcEEEEcCCCEeE
Confidence 6788899999999999999889999999999999999999 4544 889999999987654321 1233445567789
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecccc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~~ 595 (626)
+.|.+|.|++.|.|+|+|+|.+|.|++|+++ .+++...+
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~~~ 114 (119)
T 2ee2_A 76 ARLENLLPDTQYFIEVGACNSAGCGPPSDMI-EAFTKKAS 114 (119)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSCCCCCCCE-EEECCCCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCccCCCCCCE-EEECCCCC
Confidence 9999999999999999999999999999664 57666543
No 308
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.70 E-value=5.4e-17 Score=131.39 Aligned_cols=122 Identities=19% Similarity=0.334 Sum_probs=100.2
Q ss_pred EEEEeeCCCCCCCCc-cEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccce
Q psy12061 468 KVMAYNNAGEGPESE-RYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~-~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~ 546 (626)
.|+|+|..|.|+.|. .+.++|.+..|. +|.++++...+.+++.|+|+ +|.+.++.|.+|.|+|+..+.... ....
T Consensus 2 sV~A~n~~G~g~~S~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~-~~~~ 77 (130)
T 1wfo_A 2 SSGSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQ--PPAAPNGIILAYQITHRLNTTTAN-TATV 77 (130)
T ss_dssp CCCCCCCCCCCCCCCCCSCCCCSCCCCC-CCCCCEEEEECSSEEEEECC--CCSCCCSCCCEEEEEEEESSCCCS-CCCE
T ss_pred eeEEEecccCCCCCCCcEEEEcCCCCCC-CCCceEEEecCCCEEEEEEc--CCCCCCCceEEEEEEEEECCCCCc-eEEE
Confidence 378999999999987 478899988885 88899999999999999999 567788999999999887654321 1223
Q ss_pred eeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 547 ~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
.....+.+.+.|.+|.|++.|.|+|+|+|..|.|++|.+ +.+++.+.
T Consensus 78 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~-~~~~T~~~ 124 (130)
T 1wfo_A 78 EVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEA-LVVTTEKR 124 (130)
T ss_dssp EEECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEE-EEECCSSC
T ss_pred EEeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCccc-EEEecCCC
Confidence 356678899999999999999999999999999999854 44666543
No 309
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.70 E-value=7e-16 Score=134.58 Aligned_cols=182 Identities=15% Similarity=0.181 Sum_probs=132.0
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCcceeEEEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEFYYTEYEVKVQA 368 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a 368 (626)
.+|.++.+.... ....|.|+++ ...++.+ .|.|+|+.. +.|... ..+.....+.+.+|.++..|.+||+|
T Consensus 3 p~P~nv~~~s~n-~~~iL~W~pp--~~~~~~v-~Y~V~y~~~--~~w~~~----c~~~~~~~c~lt~l~~~~~Y~~rV~A 72 (201)
T 3lqm_A 3 PPPENVRMNSVN-FKNILQWESP--AFAKGQL-TFTAQYLSY--RIFQDK----CMQTTLTECDFSSLSKYGDHTLRVRA 72 (201)
T ss_dssp CCCEEEEEEEET-TEEEEEEECC--CCSSSCC-EEEEEEEET--TEEEEE----EEEESSSEEECTTSCSSSCEEEEEEE
T ss_pred CCCcccEEEEEC-CceEEEECCC--CCCCCCe-EEEEEEEEC--CCcccC----cCccCCCEEECCCCccCCCEEEEEEE
Confidence 478899987665 4567999983 3444444 599999986 356532 22334567889999999999999999
Q ss_pred ecCCCCCCCCccEEEEcc-CCCCCCCCCceEEEeeecceEEEEeeeccccccccce---------eeEEEEEEEEecCCC
Q psy12061 369 INDVGPGPESEVVTIFSA-EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRG---------RLIGHRIKYWKEDNP 438 (626)
Q Consensus 369 ~n~~g~~~~s~~~~~~t~-~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~---------~i~~Y~v~~~~~~~~ 438 (626)
.+..|.|.++.. .+... ...+ ++| .+.+. ...++|.|.|.+|...+ +| .+..|.|.||+.+..
T Consensus 73 ~~~~~~S~~s~~-~f~~~~~t~~-~PP-~v~~~-~~~~si~v~w~~P~~~~---~~~~~~~~~~~~~l~Y~v~y~~~~~~ 145 (201)
T 3lqm_A 73 EFADEHSDWVQI-TFSPVDDTII-GPP-GMQVE-VLADCLHMRFLAPKIEN---EYETWTMKNVYNSWTYNVQYWKQGTD 145 (201)
T ss_dssp EETTEECCCEEE-EECHHHHSBC-CCC-EEEEE-EETTEEEEEEECCEEEC---SSCEEEHHHHCTTCEEEEEEEETTCC
T ss_pred ecCCCcCcceee-eeeecccCee-CCC-EEEEE-EeCCEEEEEEcCCCccC---CCcccCHHHhCCceEEEEEEEECCCC
Confidence 999988888754 33322 2333 356 67774 45789999999886432 12 267999999986554
Q ss_pred ccceEEEEecCccceEEEeCCccCceEEEEEEEeeC--CCCCCCCccEEEeecCC
Q psy12061 439 EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN--AGEGPESERYLERTYRK 491 (626)
Q Consensus 439 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~--~g~s~~s~~~~~~t~~~ 491 (626)
... ........+.+.+|+|++.|.|+|+|.+. .|.|.+|....+.|..+
T Consensus 146 ~~~----~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 146 EKF----QITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCE----EECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred cEE----EEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 331 12344566999999999999999999997 67889999998888754
No 310
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.69 E-value=9.7e-17 Score=144.92 Aligned_cols=172 Identities=15% Similarity=0.200 Sum_probs=111.3
Q ss_pred CCCCceEEEEeeeCCCC--CCee--EEEeCC--E---Ec-----c-----------CCCcEEEccCC-----cEEEccCC
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKF--VWKKDG--N---II-----G-----------SGGRRKIFENG-----NLLISPVS 51 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i--~W~~~~--~---~i-----~-----------~~~~~~~~~~g-----~L~i~~v~ 51 (626)
|.+|++|+|.|.+.+.+ .+.+ .|+|.. . .+ . ..+|+.+..++ +|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 91 (232)
T 3qhz_H 12 VKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMD 91 (232)
T ss_dssp ECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred ECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCC
Confidence 57899999999997642 2455 999831 1 11 0 12477665443 59999999
Q ss_pred CCCCEEEEEEEEcCC--------CCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEee
Q psy12061 52 RDDSGIYSCTATNVH--------GMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTH 119 (626)
Q Consensus 52 ~~d~G~Y~C~a~n~~--------g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~ 119 (626)
.+|+|.|.|.+.+.. ......+.|.|.. +|.+...+ ....+..|+.++|.|.+.+.+++.+.+.|++
T Consensus 92 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~ 170 (232)
T 3qhz_H 92 PVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLA-PSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (232)
T ss_dssp GGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEEC-C-------CEEEEEEEEEEEBSSCCEEEEGG
T ss_pred hhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEec-ccccccCCCcEEEEEEEeeEeCCCeEEEEEE
Confidence 999999999999763 2223446777752 44444333 3345667999999999999765567889999
Q ss_pred CCEEeccccCC--ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 120 NGVRIGNMDLN--ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 120 ~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
+|..+...... ......+. ..+.|.|......| |.|+|.|.|..+.......|.+
T Consensus 171 ~g~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 171 GALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp GTBCTTEEECCCEECTTSCEE-EEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CCEecceeeccceeCCCCCEE-EEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 98644321100 00011111 22478899988888 9999999999887766666554
No 311
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.69 E-value=6.2e-17 Score=146.81 Aligned_cols=162 Identities=19% Similarity=0.236 Sum_probs=107.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EE---c------------cCCCcEEEccC----CcEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NI---I------------GSGGRRKIFEN----GNLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~---i------------~~~~~~~~~~~----g~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++|+|.|.+.+ +.+.|.|+|++ .. + ...+|+.+..+ .+|.|.+++.+|+|.|.|
T Consensus 11 v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (238)
T 1bec_A 11 AVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYFC 89 (238)
T ss_dssp EETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEEE
T ss_pred EeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEEE
Confidence 578999999999954 67899999853 11 1 11356666532 379999999999999999
Q ss_pred EEEcCCCC-----ceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC
Q psy12061 61 TATNVHGM-----DESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL 129 (626)
Q Consensus 61 ~a~n~~g~-----~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~ 129 (626)
.+.|..+. ....+.|.|.. +|.+....|....+..|+.++|.|.+.+.+++.+.+.|+|||..+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~ 169 (238)
T 1bec_A 90 ASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVS 169 (238)
T ss_dssp EEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEE
T ss_pred EEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCcee
Confidence 99987531 12345788865 34444444555556689999999999986433357899999999865320
Q ss_pred CccCCCeeEecCCeEEE------eecCCCC-CEeEEEEEEeCCC
Q psy12061 130 NELETPNINIDGGLLEI------TNASFAD-AGEYECVVKSTVG 166 (626)
Q Consensus 130 ~~~~~~~~~~~~~~l~i------~~~~~~d-~g~Y~C~a~n~~g 166 (626)
.. .......++.+.+ ......| .|.|+|.|.|...
T Consensus 170 ~~--~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 170 TD--PQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EC--SSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred cc--cceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 00 0011123344333 3333333 6789999999743
No 312
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.69 E-value=4.5e-16 Score=139.40 Aligned_cols=191 Identities=13% Similarity=0.137 Sum_probs=122.2
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCc---cceEEE---EecCccceEEEeCCccC
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE---ETAVYY---LSRTTRNWALIVGLQPD 462 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~---~~~~~~---~~~~~~~~~~i~~L~p~ 462 (626)
.|+..|.++.+...+..++.+.|++....+.. ....|.|.|+...... ...... ........+...+|.++
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~---~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~ 104 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTK---NEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIA 104 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECCC-----------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSS
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCC---CCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCccc
Confidence 35558999988888889999999975432110 0137888886654321 011000 00122234556788999
Q ss_pred ceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEE--eeeCC----CEEEEEEeecCCC-CCCC-ceeeEEEEEE
Q psy12061 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHI--KGINP----TTVHVTWRYVSPS-FEEE-PIIGYKVRVW 534 (626)
Q Consensus 463 t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~--~~~~~----~~~~l~W~~~~~~-~~~~-~i~~Y~i~~~ 534 (626)
+.|.|+|.| | . ..+....+.....+.+.||.++.+ ...+. ..+.|+|++|... ..+| .+..|+|+|+
T Consensus 105 ~~Y~~~V~a-N-~---~~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~ 179 (236)
T 1axi_B 105 IPYCIKLTS-N-G---GTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYK 179 (236)
T ss_dssp SEEEEEEEE-T-T---EEEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEE
T ss_pred ceEEEEEEE-C-C---ccCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEE
Confidence 999999999 7 2 334445565556667779999954 33322 3599999964332 2355 6789999998
Q ss_pred EeccCCccccceeeecCccceEEecCCCCCceEEEEEEEEecCC--CCCCCCCcEEEeec
Q psy12061 535 EVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSNGG--DGRMSSPAITFQMG 592 (626)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G--~g~~s~~~~~~~~~ 592 (626)
..+.. ..........+++.|.+|+||+.|.|+|||.+..| .|++|.+ +.|++.
T Consensus 180 ~~~~~----~w~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~-~~~~~p 234 (236)
T 1axi_B 180 EVNET----KWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEV-LYVTLP 234 (236)
T ss_dssp ETTCS----SCEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCC-EEECCC
T ss_pred ECCCC----ceEEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCC-EEEECC
Confidence 76543 22222233568899999999999999999999998 8899865 446554
No 313
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.69 E-value=8.2e-17 Score=130.30 Aligned_cols=124 Identities=19% Similarity=0.334 Sum_probs=103.4
Q ss_pred EEEecCCCCCCCCcc-EEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEE
Q psy12061 366 VQAINDVGPGPESEV-VTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444 (626)
Q Consensus 366 v~a~n~~g~~~~s~~-~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~ 444 (626)
|+|.|..|.|.+|.. +.++|.+.+|. +|.++++...+.+++.|+|++|... +|.|.+|.|+|+..+........
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~ 77 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPPAAP----NGIILAYQITHRLNTTTANTATV 77 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCCC-CCCCCEEEEECSSEEEEECCCCSCC----CSCCCEEEEEEEESSCCCSCCCE
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCCC-CCCceEEEecCCCEEEEEEcCCCCC----CCceEEEEEEEEECCCCCceEEE
Confidence 678999999998874 77888888887 8999999999999999999998643 36799999999887654333222
Q ss_pred EEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 445 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 445 ~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.........+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|....|+
T Consensus 78 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 127 (130)
T 1wfo_A 78 EVLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGP 127 (130)
T ss_dssp EEECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCC
T ss_pred EEeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCC
Confidence 34455667799999999999999999999999999999999999887765
No 314
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.69 E-value=2.2e-16 Score=144.51 Aligned_cols=165 Identities=17% Similarity=0.228 Sum_probs=110.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--E--E-c------------cCCCcEEEcc----CCcEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--N--I-I------------GSGGRRKIFE----NGNLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~--~-i------------~~~~~~~~~~----~g~L~i~~v~~~d~G~Y~C 60 (626)
|.+|++++|.|.+. .+.+.|.|+|+. . . + ...+|+.+.. +.+|.|.+++.+|+|.|.|
T Consensus 15 v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 93 (252)
T 1oga_E 15 RKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYLC 93 (252)
T ss_dssp EETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEEE
T ss_pred EcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEEE
Confidence 57899999999995 457899999842 1 1 1 1236777754 2479999999999999999
Q ss_pred EEEcCC---CCceeeEEEEEEe------CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc
Q psy12061 61 TATNVH---GMDESKGRLIVLH------GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE 131 (626)
Q Consensus 61 ~a~n~~---g~~~~~~~l~v~~------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~ 131 (626)
.+.|.. ......+.|.|.. +|.+....|....+..|+.++|.|.+.+..++.+.+.|+|||..+.......
T Consensus 94 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~ 173 (252)
T 1oga_E 94 ASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTD 173 (252)
T ss_dssp EEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEEC
T ss_pred EEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccc
Confidence 999862 1122345677763 3444333344444557999999999998643335789999999886532100
Q ss_pred ---------cCCCeeEecCCeEEEeecCCC-CCEeEEEEEEeCCCce
Q psy12061 132 ---------LETPNINIDGGLLEITNASFA-DAGEYECVVKSTVGKI 168 (626)
Q Consensus 132 ---------~~~~~~~~~~~~l~i~~~~~~-d~g~Y~C~a~n~~g~~ 168 (626)
.....+ .-.+.|.|...... |.|.|+|.+.|.....
T Consensus 174 ~~~~~~~~~~~~gt~-~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 174 PQPLKEQPALNDSRY-SLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp SSCEESCTTSTTCCE-EEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred cccccccccCCCCCE-EEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 000111 11234777766554 5789999999976543
No 315
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1e-16 Score=128.58 Aligned_cols=121 Identities=28% Similarity=0.430 Sum_probs=103.4
Q ss_pred EEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEE
Q psy12061 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVY 444 (626)
Q Consensus 365 ~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~ 444 (626)
+|+|.|..|.|.+|..+.+.|.+.+|..+|.++++...+.+++.|+|++|.... .++.|.+|.|+|+.........
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~--~~g~i~~Y~v~~~~~~~~~~~~-- 78 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGT--QNGFITGYKIRHRKTTRRGEME-- 78 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTT--CCSCCCEEEEEEEESSSSCCEE--
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcC--CCcEEeEEEEEEEECCCCcceE--
Confidence 578999999999999999999999998789999999999999999999987532 2377999999998876554322
Q ss_pred EEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecC
Q psy12061 445 YLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYR 490 (626)
Q Consensus 445 ~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~ 490 (626)
........+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+
T Consensus 79 -~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 79 -TLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp -EECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred -EecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 244566779999999999999999999999999999999998875
No 316
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=4e-16 Score=123.83 Aligned_cols=116 Identities=31% Similarity=0.424 Sum_probs=97.4
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|.+|..+.+.|.+++|..+|.++++...+.+++.|+|++|.. +.|.+|.|+|+..+................
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~------g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 74 (119)
T 2ee2_A 1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE------KIVESYQIRYWAAHDKEEAANRVQVTSQEY 74 (119)
T ss_dssp CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC------TTCCEEEEEEEESSSCGGGCEEEEEETTCS
T ss_pred CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC------CccceEEEEEEECCCcccCcEEEEcCCCEe
Confidence 67788888889999999998899999999999999999999874 458999999988765443333333344556
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.+.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..|+
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 116 (119)
T 2ee2_A 75 SARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGP 116 (119)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCC
Confidence 799999999999999999999999999999999999876654
No 317
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=3e-15 Score=151.86 Aligned_cols=164 Identities=11% Similarity=0.114 Sum_probs=110.9
Q ss_pred CCceEEEEeeeCCC-CCC-eeEEEeCCEEccC-CCcEEEccCC------cEEEccCCCCCCEEEEEEEEcCCCCceeeE-
Q psy12061 4 EGGNVTIFCNPEAA-PKP-KFVWKKDGNIIGS-GGRRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDESKG- 73 (626)
Q Consensus 4 ~G~~~~l~C~~~g~-p~p-~i~W~~~~~~i~~-~~~~~~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~- 73 (626)
+|+.++|.|.+.|. |.| +|.|++++..... ........+| .|.|.....+ .|.|+|.|.|..+.....+
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~ 227 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIF 227 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEe
Confidence 56899999999997 766 9999997654210 0111112233 4889888877 9999999999988755443
Q ss_pred ----------EEEEEeC----------------------------------------------------CceeeeCCCce
Q psy12061 74 ----------RLIVLHG----------------------------------------------------PSYYEQLPPKI 91 (626)
Q Consensus 74 ----------~l~v~~~----------------------------------------------------p~~~~~~~~~~ 91 (626)
.+.+..+ |.+...+|...
T Consensus 228 ~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~ 307 (512)
T 1zvo_C 228 RWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQ 307 (512)
T ss_pred cCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChH
Confidence 2333322 33333445445
Q ss_pred EEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccC---Cc-cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 92 TIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDL---NE-LETPNINIDGGLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 92 ~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
.+.+|++++|.|.+.+..++.+.|.|+|||..+..... .. ..++.+. ..+.|.|..+...|.|.|+|.|.|..+.
T Consensus 308 ~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~-~~s~L~i~~~~~~d~g~y~C~a~n~~~~ 386 (512)
T 1zvo_C 308 DLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQS-QHSRLTLPRSLWNAGTSVTCTLNHPSLP 386 (512)
T ss_pred HhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEE-EEEEEEEchHHhcCCCeEEEEEEeCCCC
Confidence 56789999999999997555678899999998652110 00 0011111 2346999999999999999999998876
Q ss_pred eE
Q psy12061 168 IS 169 (626)
Q Consensus 168 ~~ 169 (626)
..
T Consensus 387 ~~ 388 (512)
T 1zvo_C 387 PQ 388 (512)
T ss_pred CC
Confidence 43
No 318
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.69 E-value=9.9e-17 Score=145.30 Aligned_cols=172 Identities=14% Similarity=0.223 Sum_probs=113.3
Q ss_pred CCCCceEEEEeeeCCCCC----CeeEEEeC--CE---Ec---c----------------CCCcEEEccCC-----cEEEc
Q psy12061 2 AGEGGNVTIFCNPEAAPK----PKFVWKKD--GN---II---G----------------SGGRRKIFENG-----NLLIS 48 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~----p~i~W~~~--~~---~i---~----------------~~~~~~~~~~g-----~L~i~ 48 (626)
|.+|++|+|.|.+.+.+. ..+.|+|. +. .+ . ..+|+.+..++ +|.|.
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 91 (239)
T 3tv3_H 12 VEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLN 91 (239)
T ss_dssp ECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEEC
T ss_pred EcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEEC
Confidence 578999999999987653 48999983 21 11 1 12566665432 49999
Q ss_pred cCCCCCCEEEEEEEEcCCC-------------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCc
Q psy12061 49 PVSRDDSGIYSCTATNVHG-------------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELL 111 (626)
Q Consensus 49 ~v~~~d~G~Y~C~a~n~~g-------------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p 111 (626)
+++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+ ....+..|+.++|.|.+.+.+++
T Consensus 92 ~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~-~~~~~~~g~~v~l~C~~~~~~p~ 170 (239)
T 3tv3_H 92 SVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLA-PSSKSTSGGTAALGCLVKDYFPE 170 (239)
T ss_dssp SCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEEC-CCCCC--TTEEEEEEEEEEEBSS
T ss_pred CCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEEC-CChhhccCCcEEEEEEEeeEeCC
Confidence 9999999999999987642 112335666642 34444333 33345579999999999995544
Q ss_pred ceeEEEeeCCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 112 DVAYIWTHNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 112 ~~~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
.+.+.|+++|..+....... .....+. ..+.|.|......| |.|+|.|.|..+.......|.+
T Consensus 171 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 171 PVTVSWNSGALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEE-EEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CeEEEEEECCccCceEecCceECCCCCEE-EEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 56789999987543211100 0011111 22468899988888 9999999999887666665543
No 319
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.68 E-value=1.3e-15 Score=136.36 Aligned_cols=194 Identities=13% Similarity=0.128 Sum_probs=126.9
Q ss_pred CCCCCCceeEeecCCcCeEEEEEeeCCCCCcccC-cceEEEEEEecCCC----cceeeeeeeecceeeEEEEeCCCccee
Q psy12061 286 KPYQAPSRIGGGGGKIGDLSISWEPLPREKQNAP-NIYYKIFWRKKNDT----EFQSETLKEYGNVGIAVVRIPSEFYYT 360 (626)
Q Consensus 286 ~p~~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~-~~~y~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~p~~ 360 (626)
.|+..|.++........++.+.|++ ...++.. ...|.+.|+..+.. .+..+............+...+|.+++
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p--~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~ 105 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTD--EVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAI 105 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECC--C--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSS
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecC--CCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccc
Confidence 3557888998777778999999997 3333333 35789988865432 233322111111234566677888999
Q ss_pred EEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceE--EEeeec----ceEEEEeeeccccccccce-eeEEEEEEEE
Q psy12061 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF--SRGFNS----TAINVTWNPIELIRENIRG-RLIGHRIKYW 433 (626)
Q Consensus 361 ~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~--~~~~~~----~si~l~W~~~~~~~~~~~~-~i~~Y~v~~~ 433 (626)
.|.|+|.| | .+ .+....+.....+.+.+|.++. +...+. ..+.|+|++|.... ..+| .+..|+|+|+
T Consensus 106 ~Y~~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~-~~~g~~~l~Yevry~ 179 (236)
T 1axi_B 106 PYCIKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNAD-IQKGWMVLEYELQYK 179 (236)
T ss_dssp EEEEEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSC-TTTTSCCEEEEEEEE
T ss_pred eEEEEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCcc-ccCCceeeEEEEEEE
Confidence 99999999 8 22 2444555555555555898985 333322 35999999986431 1134 5789999998
Q ss_pred ecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCC--CCCCCccEEEeecC
Q psy12061 434 KEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAG--EGPESERYLERTYR 490 (626)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g--~s~~s~~~~~~t~~ 490 (626)
..+...+.. ........+.|.+|+|++.|.|+|+|.+..| .|++|..+.+.|.+
T Consensus 180 ~~~~~~w~~---~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p~ 235 (236)
T 1axi_B 180 EVNETKWKM---MDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQ 235 (236)
T ss_dssp ETTCSSCEE---CCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCCC
T ss_pred ECCCCceEE---EeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECCC
Confidence 876543332 2223446799999999999999999999988 78999988887754
No 320
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.67 E-value=4.8e-16 Score=118.57 Aligned_cols=99 Identities=20% Similarity=0.392 Sum_probs=75.6
Q ss_pred CCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEE
Q psy12061 492 APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRV 571 (626)
Q Consensus 492 ~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V 571 (626)
.|..+|.++.+...+.+++.|+|++|+.+..+|.|.+|.|.|+..+.............++.+++.|.+|+|++.|.|+|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence 57778999999999999999999965445589999999999987654321123334555667889999999999999999
Q ss_pred EEEecCCCCCCCCCcEEEee
Q psy12061 572 LAFSNGGDGRMSSPAITFQM 591 (626)
Q Consensus 572 ~a~~~~G~g~~s~~~~~~~~ 591 (626)
+|+|.+|.|++|.+. .++|
T Consensus 83 ~A~n~~G~G~~S~~~-~~~T 101 (102)
T 3n1f_C 83 QCFNEGGESEFSNVM-ICET 101 (102)
T ss_dssp EEEETTEECCCCCCE-EEEC
T ss_pred EEECCCcCCCCCCCE-Eeec
Confidence 999999999999654 3443
No 321
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=6e-16 Score=123.61 Aligned_cols=119 Identities=19% Similarity=0.180 Sum_probs=94.9
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEE-eeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCcc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSR-GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTR 451 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~-~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 451 (626)
|.|.+|..+.++|.+++|..+|.++++. ..+.+++.|+|++|..... +|.|.+|+|+|+..................
T Consensus 1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~--~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~ 78 (124)
T 2dbj_A 1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQ--DGELVGYRISHVWQSAGISKELLEEVGQNG 78 (124)
T ss_dssp CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCST--TCCEEEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccC--CCeEeEEEEEEEECCCCCccceEEEeCCCc
Confidence 6788899999999999998899999998 5788999999999853322 488999999996544332111221223455
Q ss_pred ceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCC
Q psy12061 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAP 493 (626)
Q Consensus 452 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p 493 (626)
..+.|.+|.+++.|.|+|+|+|..|.|++|..+.++|.++..
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~~ 120 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHSG 120 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSCC
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 679999999999999999999999999999999999987643
No 322
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.67 E-value=1.5e-16 Score=121.09 Aligned_cols=77 Identities=29% Similarity=0.502 Sum_probs=68.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC--CcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG--GRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~--~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|+|.|+|||.+|... .|+.+..++ +|.|.+++.+|+|.|+|.|.|..|...+.+.|.
T Consensus 17 v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~ 96 (100)
T 3knb_A 17 IDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96 (100)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEE
Confidence 568999999999999999999999999999754 466666554 699999999999999999999999999999998
Q ss_pred EE
Q psy12061 77 VL 78 (626)
Q Consensus 77 v~ 78 (626)
|.
T Consensus 97 V~ 98 (100)
T 3knb_A 97 IR 98 (100)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 323
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.8e-16 Score=125.53 Aligned_cols=115 Identities=30% Similarity=0.402 Sum_probs=93.1
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.+..|+.+|.++++...+.+++.|+|+ +|...++.|.+|.|+|+..+..... ..........+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~ 77 (121)
T 2dlh_A 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWK--EPEEPNGQIQGYRVYYTMDPTQHVN-NWMKHNVADSQI 77 (121)
T ss_dssp CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEE--CCSCCCSCEEEEEEECCSCTTSCTT-TSCCCCCSSCSE
T ss_pred CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEEC--CCCCCCCcEeEEEEEEEeCCCCCcc-ccEEEecCCceE
Confidence 6788999999999999998899999999889999999999 5677889999999998765433221 122223346788
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.+|.|++.|.|+|+|+|..|.|++|++ +.+++...
T Consensus 78 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~-~~~~T~~~ 115 (121)
T 2dlh_A 78 TTIGNLVPQKTYSVKVLAFTSIGDGPLSSD-IQVITQTG 115 (121)
T ss_dssp ECCBSCCSSCEEEEEEEEEESSCBCCCCCC-EEEECCCC
T ss_pred EEecCCCCCCEEEEEEEEEeCCccCCCCCC-EEEECCCC
Confidence 999999999999999999999999999965 45666543
No 324
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.67 E-value=4.4e-17 Score=156.98 Aligned_cols=157 Identities=16% Similarity=0.273 Sum_probs=105.7
Q ss_pred CCCCceEEEEeeeCCC-CC-CeeEEEeCCEEcc---------CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce
Q psy12061 2 AGEGGNVTIFCNPEAA-PK-PKFVWKKDGNIIG---------SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~-p~i~W~~~~~~i~---------~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 70 (626)
+.+|++++|.|.+.|. |. |.|.|+|+|..+. .++++.+ .+.|.|.+++.+| |.|+|.|.|..+...
T Consensus 132 ~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 132 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp TTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE--EEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred ccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEE--EEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 4689999999999987 65 7999999997642 1122221 1269999999888 999999999987643
Q ss_pred eeEEEE------------------------EEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEecc
Q psy12061 71 SKGRLI------------------------VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGN 126 (626)
Q Consensus 71 ~~~~l~------------------------v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~ 126 (626)
....+. +..+|.+...++.... ..|..++|.|.+.+.+++.+.|.|+|||..+..
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~ 287 (344)
T 1za6_B 209 VDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN 287 (344)
T ss_dssp EEEEECCCCC--------------------CCBCCEEEEECCCGGG-GGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCS
T ss_pred ceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHh-ccCCcEEEEEEEeeEECCCeEEEEEECCeECCC
Confidence 332221 1234554444333332 356779999999997656678899999988864
Q ss_pred ccCCccCCCee-EecC------CeEEEeecCCCCCEeEEEEEEeCCCc
Q psy12061 127 MDLNELETPNI-NIDG------GLLEITNASFADAGEYECVVKSTVGK 167 (626)
Q Consensus 127 ~~~~~~~~~~~-~~~~------~~l~i~~~~~~d~g~Y~C~a~n~~g~ 167 (626)
... .+. ...+ +.|.|......|.|.|+|.|.|....
T Consensus 288 ~~~-----~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 288 YKT-----TPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEE-----CCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred cEe-----cceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 310 111 1122 23555555556799999999987653
No 325
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.66 E-value=5.3e-15 Score=127.51 Aligned_cols=154 Identities=14% Similarity=0.292 Sum_probs=116.5
Q ss_pred CCCceEEEEeeeCC-CCC---CeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 3 GEGGNVTIFCNPEA-APK---PKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 3 ~~G~~~~l~C~~~g-~p~---p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
..|+.++|+|.+.| .|. -.+.|+|||.++... .+.|.|..+...|+|.|+|.+.|..|.......+.|.
T Consensus 15 ~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa-------T~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT 87 (304)
T 3shs_A 15 LAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-------TATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLM 87 (304)
T ss_dssp CTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC-------SSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEE
T ss_pred cCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC-------cceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEe
Confidence 57999999999865 463 389999999987532 3469999999999999999999988876655555555
Q ss_pred eCC--ceeeeCCCceEEecCCcEEEEEEe--cccCCc----ceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecC
Q psy12061 79 HGP--SYYEQLPPKITIAAHRNLQLRCSA--HTEELL----DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNAS 150 (626)
Q Consensus 79 ~~p--~~~~~~~~~~~v~~g~~~~l~C~~--~~~p~p----~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 150 (626)
..+ ......|.+..+..|++++|.+.+ .|..+| ..+|.|+||+..+.. ...|.+....
T Consensus 88 ~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg--------------Aq~lT~sS~T 153 (304)
T 3shs_A 88 EEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT--------------TQDITIQEFT 153 (304)
T ss_dssp CBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES--------------SSEEEECSCC
T ss_pred ccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC--------------ccccceeeEE
Confidence 433 233344777788889999999988 543322 578999999988853 2367888888
Q ss_pred CCCCEeEEEEEEeCCCc--eEEEEEEEEe
Q psy12061 151 FADAGEYECVVKSTVGK--ISTKTTVIVE 177 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~--~~~~~~l~v~ 177 (626)
..++|.|+|.+.|..+. .+.++.+.+.
T Consensus 154 ateaG~YtV~VTn~~~~c~~s~~~~i~~~ 182 (304)
T 3shs_A 154 ADKNGVYTVKVWGESEDSAASASTKIMLA 182 (304)
T ss_dssp GGGCEEEEEEEESSSGGGCEEEEEEEEEC
T ss_pred ecCCeEEEEEEEcCCCCcccccceEEEEE
Confidence 89999999999998774 3455555544
No 326
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=2.1e-16 Score=142.15 Aligned_cols=163 Identities=17% Similarity=0.178 Sum_probs=108.3
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--EE---c------------c-CCCcEEEccCC-----cEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--NI---I------------G-SGGRRKIFENG-----NLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~~---i------------~-~~~~~~~~~~g-----~L~i~~v~~~d~G 56 (626)
+.+|++|+|.|.+.+. +.+.|.|+|.. .. | . ..+|+.+..+. +|.|.+++.+|+|
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 92 (230)
T 1ypz_F 13 RPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEA 92 (230)
T ss_dssp EETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGCS
T ss_pred EeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhCE
Confidence 5689999999999875 56799999842 11 1 0 24666665432 6999999999999
Q ss_pred EEEEEEEcC--CCC--ceeeEEEEEEe---------CCceeeeCCCceEEecCCcEEEEEEeccc-CCcceeEEEee-CC
Q psy12061 57 IYSCTATNV--HGM--DESKGRLIVLH---------GPSYYEQLPPKITIAAHRNLQLRCSAHTE-ELLDVAYIWTH-NG 121 (626)
Q Consensus 57 ~Y~C~a~n~--~g~--~~~~~~l~v~~---------~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-p~p~~~i~W~~-~~ 121 (626)
.|.|.+.+. ... ....+.|.|.. +|.....+|....+..|+.++|.|.+.+. |. .+.+.|++ ||
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~-~~~v~W~~~~g 171 (230)
T 1ypz_F 93 IYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPD-VIRVYWKEKDG 171 (230)
T ss_dssp EEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSC-CCEEEEECTTS
T ss_pred EEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCC-CeEEEEEccCC
Confidence 999999985 111 22446888862 23222222444445679999999999986 54 35789999 88
Q ss_pred EEeccccCC--ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 122 VRIGNMDLN--ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 122 ~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
..+...... ......+. ..+.|.|..... + |.|+|.+.|..+..
T Consensus 172 ~~l~~~~~~~~~~~~~~~~-~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 172 NTILDSQEGDTLKTNDTYM-KFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp SCBCCCEECCCEEETTEEE-EEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred eEccccccceeecCCCCEE-EEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 776432100 00011111 124688888765 4 99999999987653
No 327
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.66 E-value=1.3e-15 Score=119.70 Aligned_cols=105 Identities=21% Similarity=0.390 Sum_probs=82.0
Q ss_pred cCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEE
Q psy12061 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568 (626)
Q Consensus 489 ~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 568 (626)
.+..|+.+|.++++...+.+++.|+|++++....++.|.+|.|+|+..+................+.+.|.+|.|++.|.
T Consensus 4 ~~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 83 (114)
T 1x4y_A 4 GSSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYD 83 (114)
T ss_dssp SCCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEE
T ss_pred cccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEE
Confidence 45678889999999999999999999964435688999999999876544311122223445667889999999999999
Q ss_pred EEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 569 MRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 569 ~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
|+|+|+|..|.|++|+++ .++|.+.
T Consensus 84 ~~V~A~n~~G~g~~S~~v-~~~T~~~ 108 (114)
T 1x4y_A 84 IKMQCFNEGGESEFSNVM-ICETKAR 108 (114)
T ss_dssp EEEEEECTTCCCCCCCCE-EEECCCC
T ss_pred EEEEEEcCCccCCCcCCE-EEEeCCC
Confidence 999999999999999664 4666543
No 328
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.66 E-value=8.2e-16 Score=120.66 Aligned_cols=114 Identities=18% Similarity=0.325 Sum_probs=93.4
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|++|..+.++|.+++|..+|.++++.. +.++|.|+|++|..... +|.|.+|+|+|+..+.... . .......
T Consensus 1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~--ng~i~gY~v~y~~~~~~~~--~--~~~~~~~ 73 (117)
T 1wj3_A 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMEN--ESEVTGYKVFYRTSSQNNV--Q--VLNTNKT 73 (117)
T ss_dssp CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSS--SCCEEEEEEEEEESSCSSC--E--EEEESSS
T ss_pred CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCcccc--CCceeEEEEEEEECCCCCC--e--EEeCCCc
Confidence 57788999999999999998999998877 88899999999854322 4889999999988765433 1 1122334
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.+.+. |.+++.|.|+|+|+|..|.|++|+.+.++|.+++|+
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~p 114 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP 114 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCC
Confidence 57777 999999999999999999999999999999988765
No 329
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=113.94 Aligned_cols=72 Identities=26% Similarity=0.437 Sum_probs=63.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.| |.|.|.|+|||.+|..+.++.+..+| +|.|.+++.+|+|.|+|.|. .....+.|.|.
T Consensus 8 ~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~----n~~~~a~l~V~ 82 (84)
T 2lu7_A 8 STPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP----QDSRIFLVSVE 82 (84)
T ss_dssp ECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT----TTCEEEEEEEC
T ss_pred EecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC----CEEEEEEEEEE
Confidence 578999999999977 89999999999999999999888776 59999999999999999984 45677888884
No 330
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.65 E-value=9.1e-16 Score=122.56 Aligned_cols=106 Identities=23% Similarity=0.397 Sum_probs=88.1
Q ss_pred eCCCCCCCCccEEEeecCC------CCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccce
Q psy12061 473 NNAGEGPESERYLERTYRK------APQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546 (626)
Q Consensus 473 ~~~g~s~~s~~~~~~t~~~------~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~ 546 (626)
+..|.|++|..+.++|.+. +|. +|.++++.... +++.|+|+ +|...++.|.+|.|+|+. +.. ....
T Consensus 2 t~~G~g~~S~~~~~~T~~~~~~~~~~P~-~P~~l~~~~~~-~sv~l~W~--~P~~~~g~i~~Y~v~y~~-~~~---~~~~ 73 (126)
T 1x5i_A 2 SSGSSGPATDWLSAETFESDLDETRVPE-VPSSLHVRPLV-TSIVVSWT--PPENQNIVVRGYAIGYGI-GSP---HAQT 73 (126)
T ss_dssp CSCCCCCCCCCCCSCCCCTTSBCSSCCC-SCSEEEEEEET-TEEEEEEE--CCSCTTBCCCEEEEEECS-SCG---GGEE
T ss_pred CCCccCCCCCCEEeECccccCccCCCCC-CCCeeEEEecC-CEEEEEEc--CCCCCCCCEeEEEEEEEc-CCC---CceE
Confidence 4578999999999999987 665 89999999887 99999999 566778999999998863 221 1233
Q ss_pred eeecCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCc
Q psy12061 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586 (626)
Q Consensus 547 ~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~ 586 (626)
.....+.+.+.|.+|+|++.|.|+|+|+|..|.|+++...
T Consensus 74 ~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~ 113 (126)
T 1x5i_A 74 IKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYES 113 (126)
T ss_dssp EECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCC
T ss_pred EEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeE
Confidence 4456778999999999999999999999999999988644
No 331
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.65 E-value=6.5e-18 Score=150.31 Aligned_cols=159 Identities=14% Similarity=0.176 Sum_probs=104.2
Q ss_pred CCCCceEEEEeeeCCCCC---CeeEEEeCCEEccCC----------CcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPK---PKFVWKKDGNIIGSG----------GRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~i~~~----------~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
+.+|++++|.|.+.|.++ +.|.| ++.++... +++ ...++|.|.+++.+|+|.|+|.|.|..+.
T Consensus 16 v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~--~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~ 91 (214)
T 1ow0_A 16 LLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCY--SVSSVLPGCAEPWNHGKTFTCTAAYPESK 91 (214)
T ss_dssp HHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCC--CEEEECTTTHHHHHHTCEEEEEECCSSCS
T ss_pred hccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcE--EEEEEEEEeHHHcCCCCeEEEEEecCCCC
Confidence 357999999999999854 69999 44444211 111 12235889999999999999999998765
Q ss_pred ceeeEEEE---EEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCC
Q psy12061 69 DESKGRLI---VLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGG 142 (626)
Q Consensus 69 ~~~~~~l~---v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~ 142 (626)
....+.+. +..+|.+...++....+..|+.++|.|.+.+.+++.++|.|+|||..+....... ...... .++
T Consensus 92 ~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~--~~~~~~~~~~dg 169 (214)
T 1ow0_A 92 TPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLT--WASRQEPSQGTT 169 (214)
T ss_dssp SCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEE--CCCEECSCSSSC
T ss_pred CceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceee--cCCcccccCCCC
Confidence 43334442 2346655444444444678999999999999655556889999999886542100 001112 334
Q ss_pred eEEE------eecCCCCCEeEEEEEEeCCC
Q psy12061 143 LLEI------TNASFADAGEYECVVKSTVG 166 (626)
Q Consensus 143 ~l~i------~~~~~~d~g~Y~C~a~n~~g 166 (626)
.+++ ......|.|.|+|.|.|...
T Consensus 170 t~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 170 TFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp CEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred cEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 3433 33333458999999998764
No 332
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.64 E-value=3.3e-16 Score=121.95 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=70.4
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc----------cCCcEEEccCCCCCCEEEEEEEEcCCCCceee
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF----------ENGNLLISPVSRDDSGIYSCTATNVHGMDESK 72 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~----------~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 72 (626)
..+..+.|.|.+.|+|.|+|+|+|||.+|..+.++.+. ..++|.|.++...|+|.|+|.|.|..|.+...
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 45789999999999999999999999999877765432 12579999999999999999999999999999
Q ss_pred EEEEEEeCCce
Q psy12061 73 GRLIVLHGPSY 83 (626)
Q Consensus 73 ~~l~v~~~p~~ 83 (626)
+.|.|...|..
T Consensus 93 ~~l~v~~~P~~ 103 (126)
T 1he7_A 93 IMAAFMDNPFE 103 (126)
T ss_dssp EEECCCSCTTS
T ss_pred EEEEEEcCCCC
Confidence 99998777643
No 333
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=6.1e-16 Score=125.60 Aligned_cols=115 Identities=23% Similarity=0.376 Sum_probs=93.5
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.+.+|+.+|.++++...+.+++.|+|+++.....++.|.+|.|+|+..+.... ..........+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~ 78 (132)
T 1x5h_A 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSD--VTETLVSGTQLS 78 (132)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEE--EECCBCCTTCCE
T ss_pred CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCc--cEEEEeCCCccE
Confidence 678899999999999999888999999989999999999953333378999999999887554311 111235567889
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|.++ .+++.+
T Consensus 79 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~ 115 (132)
T 1x5h_A 79 QLIEGLDRGTEYNFRVAALTINGTGPATDWL-SAETFE 115 (132)
T ss_dssp EEEECCCSSCEEEEECEEEETTEEEEECCCE-EEECCS
T ss_pred EEeCCCCCCCEEEEEEEEEcCCccCCCCcCE-EeEcCc
Confidence 9999999999999999999999999999664 466654
No 334
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=5.8e-16 Score=121.93 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=74.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC---CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+... ++|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 19 v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 98 (114)
T 2cqv_A 19 VRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV 98 (114)
T ss_dssp EETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEE
T ss_pred EeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEE
Confidence 56899999999999999999999999999988778877643 469999999999999999999999999999999998
Q ss_pred eCCceee
Q psy12061 79 HGPSYYE 85 (626)
Q Consensus 79 ~~p~~~~ 85 (626)
..|....
T Consensus 99 ~~p~~P~ 105 (114)
T 2cqv_A 99 DKPDPPA 105 (114)
T ss_dssp CSCSCCC
T ss_pred CCCCCCC
Confidence 8775443
No 335
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.64 E-value=7.8e-16 Score=149.36 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=109.3
Q ss_pred CCCCceEEEEeeeCCC-CCC---eeEEEeCCEEccCC--CcEEEccC------CcEEEccCCCCCCEEEEEEEEcCCCCc
Q psy12061 2 AGEGGNVTIFCNPEAA-PKP---KFVWKKDGNIIGSG--GRRKIFEN------GNLLISPVSRDDSGIYSCTATNVHGMD 69 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p---~i~W~~~~~~i~~~--~~~~~~~~------g~L~i~~v~~~d~G~Y~C~a~n~~g~~ 69 (626)
+.+|++++|.|.+.|. |.| .|.|+|++..+... .......+ ..|.|..++.+|+|.|+|.|.+..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 4679999999999988 333 79999998765321 11111122 269999999999999999999987754
Q ss_pred eeeEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc---cCCCeeEecCC
Q psy12061 70 ESKGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---LETPNINIDGG 142 (626)
Q Consensus 70 ~~~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~---~~~~~~~~~~~ 142 (626)
.....+ .+..+|.+... +.......|+.++|.|.+.+..++.++|.|+|||..+....... ..+..+. ...
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~-~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~-~~s 337 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTI-PPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYF-VYS 337 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEee-CCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEE-EEE
Confidence 333333 33345655443 33333446999999999999766678899999999875432100 0001111 123
Q ss_pred eEEEeecCCCCCEeEEEEEEeCCC
Q psy12061 143 LLEITNASFADAGEYECVVKSTVG 166 (626)
Q Consensus 143 ~l~i~~~~~~d~g~Y~C~a~n~~g 166 (626)
.|.|......|.|.|+|.|.|..-
T Consensus 338 ~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 338 KLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEEEcHHHhCCCCcEEEEEEeCCC
Confidence 466777666789999999998754
No 336
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=117.43 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=84.5
Q ss_pred eecCCCCCCCCceEEEeee--CCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCC
Q psy12061 487 RTYRKAPQKPPSAVHIKGI--NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~--~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 564 (626)
+|.++.|+.+|.++++... +.+++.|+|+ +|...+|.|.+|.|+|+...................+.+.|.+|.|+
T Consensus 2 ~T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 79 (114)
T 2ede_A 2 SSGSSGPTSAPKDLTVITREGKPRAVIVSWQ--PPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLD 79 (114)
T ss_dssp CCCCCCCCSCCEEEEEEECSSCSSCEEEEEE--CCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSS
T ss_pred CCCCCCCCCCCcceEEEEccCCCCEEEEEEC--CCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCC
Confidence 4677888889999999888 7799999999 66778889999999987644332222334455678899999999999
Q ss_pred ceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 565 ~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.|+|+|+|..|.|++|.+. .+++.+.
T Consensus 80 t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~~ 108 (114)
T 2ede_A 80 TMYYFRIQARNSKGVGPLSDPI-LFRTLKV 108 (114)
T ss_dssp CEEEEEEEEECSSCBCCCCCCE-EEECCCS
T ss_pred CEEEEEEEEEeCCcCcCCcccE-EEEecCC
Confidence 9999999999999999999764 4666543
No 337
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=125.52 Aligned_cols=118 Identities=27% Similarity=0.349 Sum_probs=96.6
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|.+|..+.++|.++.|+.+|.++++...+.+++.|+|++|... +|.|.+|.|+|+...................
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 76 (121)
T 2dlh_A 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEP----NGQIQGYRVYYTMDPTQHVNNWMKHNVADSQ 76 (121)
T ss_dssp CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCC----CSCEEEEEEECCSCTTSCTTTSCCCCCSSCS
T ss_pred CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCC----CCcEeEEEEEEEeCCCCCccccEEEecCCce
Confidence 678889888899999999879999999988999999999998543 3779999999976654322211111233556
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+++|.
T Consensus 77 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 118 (121)
T 2dlh_A 77 ITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGP 118 (121)
T ss_dssp EECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCC
Confidence 799999999999999999999999999999999999988876
No 338
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.64 E-value=8.7e-16 Score=139.46 Aligned_cols=172 Identities=15% Similarity=0.264 Sum_probs=110.3
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeC--CE---Ec--------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKD--GN---II--------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~--~~---~i--------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. +...+.|+|. +. .+ ...+|+.+..+. +|.|.+++.+|+
T Consensus 11 v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 90 (248)
T 3u2s_H 11 VQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVEDT 90 (248)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHHC
Confidence 5789999999999763 4568999973 21 11 013566665433 499999999999
Q ss_pred EEEEEEEEcCC----------------------CCceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccC
Q psy12061 56 GIYSCTATNVH----------------------GMDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEE 109 (626)
Q Consensus 56 G~Y~C~a~n~~----------------------g~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p 109 (626)
|.|.|.+.+.. ........|.|.. +|.+...++ ...+..|+.++|.|.+.+..
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~-~~~~~~g~~~~L~C~~~~~~ 169 (248)
T 3u2s_H 91 ATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYF 169 (248)
T ss_dssp EEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECC-C------CEEEEEEEEEEEB
T ss_pred EEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCC-CccccCCCcEEEEEEEeeEE
Confidence 99999998752 1122345777752 344443333 33456799999999999865
Q ss_pred CcceeEEEeeCCEEeccccCCc--cCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 110 LLDVAYIWTHNGVRIGNMDLNE--LETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 110 ~p~~~i~W~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
++.+.+.|+++|..+....... ..+..+. ..+.|.|......| |.|+|.+.|..+.......+.+
T Consensus 170 P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 170 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp SSCCEEEEGGGTBCTTEEECCCEECTTSCEE-EEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred CCCeEEEEeECCccCceeecCceECCCCCEE-EEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 4457889999986543211100 0111111 22468888888788 9999999999877665555543
No 339
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.64 E-value=6.6e-16 Score=124.09 Aligned_cols=112 Identities=21% Similarity=0.343 Sum_probs=89.5
Q ss_pred CccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccc-----cceeeecCccce
Q psy12061 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRA-----NDTIIPVGNTLD 555 (626)
Q Consensus 481 s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~-----~~~~~~~~~~~~ 555 (626)
|+.+.++|.+++|+.+|.++++...+.+++.|+|++++....+|.|.+|.|+|+..+...... ........+.+.
T Consensus 2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (125)
T 1uen_A 2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTH 81 (125)
T ss_dssp CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSE
T ss_pred CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccE
Confidence 456778999999988999999999999999999995333457889999999998766542211 123445677889
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|.++ .++|.+
T Consensus 82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~ 118 (125)
T 1uen_A 82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDR-VFNTPE 118 (125)
T ss_dssp EEEESCCSSCEEEEEEEEEESSCEEEECCCE-EEECCC
T ss_pred EEeCCCCCCCEEEEEEEEecCCCCCCCCCCE-EEECCC
Confidence 9999999999999999999999999999765 465553
No 340
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.63 E-value=3.8e-17 Score=149.84 Aligned_cols=172 Identities=13% Similarity=0.093 Sum_probs=53.1
Q ss_pred CCCCceEEEEeeeCCC-CCC--eeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCC--------ce
Q psy12061 2 AGEGGNVTIFCNPEAA-PKP--KFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGM--------DE 70 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p--~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~--------~~ 70 (626)
+.+|+.++|.|.+.|. |.+ +|+|+|+++++............+|.|.....+|.+.|+|.|.|..+. ..
T Consensus 98 ~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s 177 (291)
T 1mq8_A 98 QPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTS 177 (291)
T ss_dssp CCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECC
T ss_pred ccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccc
Confidence 5789999999999887 443 699999998885322100001124777766677777999999987653 23
Q ss_pred eeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCc-ceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeec
Q psy12061 71 SKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNA 149 (626)
Q Consensus 71 ~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~ 149 (626)
....|.|.++|...........+.+|+.++|.|.+.+.+++ .+.+.|+++|+.+.... ...++.+.+..+
T Consensus 178 ~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~---------~~~g~~~~~~~~ 248 (291)
T 1mq8_A 178 APYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV---------TYGNDSFSAKAS 248 (291)
T ss_dssp CCEECBC-------------------------------------------------------------------------
T ss_pred cceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCcee---------eecCCeEEEEEe
Confidence 45688888876442211112367899999999999997554 56789999999987531 112334444444
Q ss_pred ---CCCC--CEeEEEEEEeCCCceEEEEEEEEeCCCCC
Q psy12061 150 ---SFAD--AGEYECVVKSTVGKISTKTTVIVEGPPGL 182 (626)
Q Consensus 150 ---~~~d--~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~ 182 (626)
..++ .+.|+|.|.|.....+....|.|+..|.+
T Consensus 249 ~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~ 286 (291)
T 1mq8_A 249 VSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286 (291)
T ss_dssp --------------------------------------
T ss_pred cceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCc
Confidence 2434 56777888775555667778888876654
No 341
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.63 E-value=1.2e-15 Score=117.57 Aligned_cols=91 Identities=22% Similarity=0.450 Sum_probs=75.0
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEEeecCCCCCE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEITNASFADAG 155 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g 155 (626)
+|.|+ ..|.++.+.+|++++|.|.+.|.|.|. |.|+|||..+.... ++.+ ....|.|.+++.+|+|
T Consensus 13 pP~f~-~~p~~~~v~~G~~~~l~C~~~G~P~p~--v~W~k~g~~l~~~~-------~~~~~~~~~~~~L~I~~v~~~D~G 82 (107)
T 3knb_B 13 PPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPV--VVWEKGGQQLAASE-------RLSFPADGAEHGLLLTAALPTDAG 82 (107)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCCE--EEEEETTEECCCCS-------SEECCEETTEEEEEESSCCGGGCE
T ss_pred CCEEE-eCCCcEEEeCCCcEEEEEEEEEecCCE--EEEEECccccccee-------eEEEeecCceEEEEEecCChhhCE
Confidence 44444 467889999999999999999999874 58999999997652 2222 2347999999999999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
.|+|.|.|..|..+..+.|.|..+|
T Consensus 83 ~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 83 VYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEEEECCCEEEEEEEEEEEcCC
Confidence 9999999999999999999998876
No 342
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.63 E-value=1e-15 Score=137.77 Aligned_cols=171 Identities=15% Similarity=0.231 Sum_probs=113.5
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeC--CE---Ec---c-----------CCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKD--GN---II---G-----------SGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~--~~---~i---~-----------~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. +...+.|+|. +. .+ . ..+|+.+..++ +|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (230)
T 3n9g_H 12 RKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDT 91 (230)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhC
Confidence 5789999999999763 4468999972 11 11 0 13577765544 399999999999
Q ss_pred EEEEEEEEcCC-----CC---ceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEE
Q psy12061 56 GIYSCTATNVH-----GM---DESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVR 123 (626)
Q Consensus 56 G~Y~C~a~n~~-----g~---~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~ 123 (626)
|.|.|.+.+.. +. ....+.|.|.. +|.+... +....+..|+.++|.|.+.+.+++.+.+.| ++..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~-~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~ 168 (230)
T 3n9g_H 92 AVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGA 168 (230)
T ss_dssp EEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEE-CCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGT
T ss_pred EEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEec-CCCccccCCCCEEEEEEEEeEECCCEEEEE--CCcc
Confidence 99999998864 11 12345777752 3433332 233345689999999999996544578899 5554
Q ss_pred eccccCC----ccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEEe
Q psy12061 124 IGNMDLN----ELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 124 ~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 177 (626)
+...... ......+. ..+.|.|......| |.|+|.+.+..+.......+.+.
T Consensus 169 ~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 169 LTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp BCTTEEECCCEECTTSCEE-EEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred cCCCeEeCCceECCCCCEE-EEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 4321100 00011111 12478999998899 99999999998877666666554
No 343
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=9.5e-16 Score=117.54 Aligned_cols=80 Identities=28% Similarity=0.447 Sum_probs=72.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc-CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~-~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+. .+.++.+..+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 20 v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 20 LAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEESC
T ss_pred EcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEecC
Confidence 4689999999999999999999999999987 467778888889999999999999999999999999989999998654
Q ss_pred C
Q psy12061 81 P 81 (626)
Q Consensus 81 p 81 (626)
|
T Consensus 100 ~ 100 (100)
T 2edj_A 100 G 100 (100)
T ss_dssp C
T ss_pred C
Confidence 3
No 344
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.62 E-value=3.3e-14 Score=123.96 Aligned_cols=184 Identities=13% Similarity=0.143 Sum_probs=130.1
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEe-----cCCCccceEEEEecCccceEEEeC-CccCceEE
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWK-----EDNPEETAVYYLSRTTRNWALIVG-LQPDTKYY 466 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~ 466 (626)
+|.++++...+-. ..|+|+++..... -..|.|+|.. .+...+.....-.........|++ |..+..|.
T Consensus 9 ~P~nv~~~s~n~~-~iL~W~p~~~~~~-----~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~ 82 (206)
T 4doh_B 9 APQQLSVLSTNMK-HLLMWSPVIAPGE-----TVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYN 82 (206)
T ss_dssp CCCCCEEEEETTE-EEEECCCCCCSSS-----CCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEE
T ss_pred CCCeeEEEEeCCE-EEEEECCCCCCCC-----CEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEE
Confidence 6999999977666 6899999853221 3579999974 344445443333344556677874 77788999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccce
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT 546 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~ 546 (626)
++|+|.+..+.|+++....|......-.+|| .+.+. ....++.|.|. +| +.+..|.|.|+..+..... ..
T Consensus 83 ~RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP-~v~v~-~~~~~i~V~~~--~p----~~~l~Y~v~y~~~~~~~~~--~~ 152 (206)
T 4doh_B 83 LRVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEIT-KDGFHLVIELE--DL----GPQFEFLVAYWRREPGAEE--HV 152 (206)
T ss_dssp EEEEEEETTEECCCEECSSCBCGGGCBCCCC-CEEEE-EETTEEEEEEC--CC----CTTCEEEEEEEESSSSCCC--EE
T ss_pred EEEEEEcCCCccCccccccccchhhcccCCC-eEEEE-eCCCEEEEEec--CC----CCcEEEEEEEEEcCCCcee--EE
Confidence 9999999988888876655544433334456 47676 47789999999 33 5667899999987654221 11
Q ss_pred eeecCccceEEecCCCCCceEEEEEEEEecC--CCCCCCCCcEEEeecc
Q psy12061 547 IIPVGNTLDADIVDLSPGKRYHMRVLAFSNG--GDGRMSSPAITFQMGE 593 (626)
Q Consensus 547 ~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~--G~g~~s~~~~~~~~~~ 593 (626)
.........+.|.+|+|++.|.|+|+|.... |.|.+|.+ .+|++..
T Consensus 153 ~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~-~C~~t~~ 200 (206)
T 4doh_B 153 KMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQT-ECVEVQG 200 (206)
T ss_dssp EEECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCC-EEECC--
T ss_pred eEEccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCC-EeEEccc
Confidence 1223345779999999999999999999864 88999954 6787764
No 345
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=3.1e-15 Score=119.56 Aligned_cols=112 Identities=22% Similarity=0.302 Sum_probs=87.1
Q ss_pred CccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccce--eeecCccceEEe
Q psy12061 481 SERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDT--IIPVGNTLDADI 558 (626)
Q Consensus 481 s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l 558 (626)
|..+.++|.+..|+.+|.++++...+.+++.|+|+++..+..++.|.+|.|+|+..+......... .....+.+.+.|
T Consensus 3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (122)
T 1va9_A 3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTL 82 (122)
T ss_dssp CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEE
T ss_pred CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEe
Confidence 456678899999988899999999999999999995333337899999999998766432211111 122346689999
Q ss_pred cCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 559 VDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 559 ~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
.+|.|++.|.|+|+|+|..|.|++|.++ .+++..
T Consensus 83 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~ 116 (122)
T 1va9_A 83 DNLKKFAQYGVVVQAFNRAGTGPSSSEI-NATTLE 116 (122)
T ss_dssp ESCCSSCCEEEEEEEEETTEECCCCCCE-ECCCCS
T ss_pred CCCCCCCEEEEEEEEEcCCCCCCCccCE-EEEeCC
Confidence 9999999999999999999999999764 455554
No 346
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=8.8e-16 Score=116.81 Aligned_cols=77 Identities=22% Similarity=0.393 Sum_probs=69.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+ .|.|.|.|+|||.+|..+.|+.+..+| +|.|.+++.+|+|.|+|.|.|. .....+.|.|.
T Consensus 19 v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 19 VNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVI 94 (100)
T ss_dssp EETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEE
T ss_pred EcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEe
Confidence 5689999999999 789999999999999988999988776 6999999999999999999998 56778899997
Q ss_pred eCCc
Q psy12061 79 HGPS 82 (626)
Q Consensus 79 ~~p~ 82 (626)
.+|.
T Consensus 95 ~~P~ 98 (100)
T 2yuz_A 95 SGPS 98 (100)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 7663
No 347
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=1.7e-15 Score=120.20 Aligned_cols=106 Identities=24% Similarity=0.377 Sum_probs=89.1
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|..+.++|.+++|. +|.++++...+.+++.|+|+ +|.+.+|.|.+|.|+|+..+.... ..........+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~ 75 (119)
T 1wfn_A 1 GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQ--EPGEKNGILTGYRISWEEYNRTNT--RVTHYLPNVTLE 75 (119)
T ss_dssp CCCCCSCCCSCCSSCCSCC-CCSCCEEESCCSSEEEEECC--CCTTCCSCCCEEEEEEEESSCGGG--CCCEEECSSCCE
T ss_pred CCCCCCCCEEEECCCCCCC-CCCceEEEECCCCEEEEEEc--CCCCCCCcEEEEEEEEEECCCCCc--eEEEEeCCCceE
Confidence 6788899999999998886 67899999889999999999 666788999999999887654321 223445568889
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~ 586 (626)
+.|.+|.|++.|.|+|+|+|..|.|++|.++
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 9999999999999999999999999998654
No 348
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.62 E-value=3.9e-15 Score=119.50 Aligned_cols=115 Identities=32% Similarity=0.484 Sum_probs=93.2
Q ss_pred CccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccc------eEEEEecCcc
Q psy12061 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET------AVYYLSRTTR 451 (626)
Q Consensus 378 s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~------~~~~~~~~~~ 451 (626)
|..+.++|.+++|..+|.++++...+.+++.|+|++|..... +|.|.+|.|+|+........ ..........
T Consensus 2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~--~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (125)
T 1uen_A 2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSI--RGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSK 79 (125)
T ss_dssp CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHH--CSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSC
T ss_pred CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhc--CceEeEEEEEEEECCCCcccccccccceEEEecCCc
Confidence 345667888899987999999999999999999999854322 37899999999877654321 1222334556
Q ss_pred ceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 452 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
..+.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+++|+
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 122 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCC
Confidence 7799999999999999999999999999999999999988776
No 349
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=3.9e-15 Score=117.93 Aligned_cols=111 Identities=18% Similarity=0.238 Sum_probs=88.6
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|++|+.+.++|....|. +|.++++...+.+++.|+|+ ++.+.++.|.+|.|+|+..... ..+ ........+.
T Consensus 1 G~s~~S~~~~~~t~~~~P~-~P~~~~~~~~~~~sv~l~W~--~p~~~~~~i~~Y~v~~~~~~~~--~~~-~~~~~~~~~~ 74 (118)
T 1x3d_A 1 GSSGSSGAEIFTTLSCEPD-IPNPPRIANRTKNSLTLQWK--APSDNGSKIQNFVLEWDEGKGN--GEF-CQCYMGSQKQ 74 (118)
T ss_dssp CCCCCCCCCCCCCCCSCCC-CCCCCEEEEEETTEEEEECC--CCCCCSSCEEEEEEEECTTTSS--SCC-EEEEEESCSE
T ss_pred CCCCCCcCEEEEcCCCCCc-CCCCcEEeccCCCEEEEEEC--CCCCCCCcceEEEEEEecCCCC--CCe-EEeeccCCcE
Confidence 6788888899999888775 78899999999999999999 5667788999999988654432 112 2223345688
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.+.+|.|++.|.|+|+|+|..|.|++|.++. +++..
T Consensus 75 ~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~-~~T~~ 111 (118)
T 1x3d_A 75 FKITKLSPAMGCKFRLSARNDYGTSGFSEEVL-YYTSG 111 (118)
T ss_dssp EEEESCCTTCEEEEECCEEESSCBCCCCCCEE-EECSC
T ss_pred EEeCCCCCCCEEEEEEEEEECCCCCCCccCEE-EEcCC
Confidence 99999999999999999999999999997654 55554
No 350
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.61 E-value=2.5e-15 Score=131.25 Aligned_cols=179 Identities=17% Similarity=0.169 Sum_probs=108.6
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeC--CccCceEEEEEE
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVG--LQPDTKYYVKVM 470 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~v~V~ 470 (626)
+|.++++...+-..+ |+|+++.... +.+..|.|+|...+...+...............|++ +.++..|.++|+
T Consensus 10 ~P~nv~~~s~n~~~i-L~W~p~~~~~----~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~ 84 (211)
T 3g9v_A 10 KPQRVQFQSRNFHNI-LQWQPGRALT----GNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVR 84 (211)
T ss_dssp CCEEEEEEEETTEEE-EEEECCCC-------CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEE
T ss_pred CCceeEEEEEcCceE-EEECCCCCCC----CCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEE
Confidence 699999987776665 9999987533 225689999987765444432222233344566754 468899999999
Q ss_pred EeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCC----CCCc--------eeeEEEEEEEecc
Q psy12061 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSF----EEEP--------IIGYKVRVWEVDQ 538 (626)
Q Consensus 471 a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~----~~~~--------i~~Y~i~~~~~~~ 538 (626)
|.+..+.|+++....|.+......+|| .+.+...+ +++.|.|++ |.. .+|. ...|.|.|+..+.
T Consensus 85 A~~~~~~S~ws~~~~f~~~~~t~i~PP-~v~v~~~~-~si~V~~~~--P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~ 160 (211)
T 3g9v_A 85 AASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVN-GSLLVILHA--PNLPYRYQKEKNVSIEDYYELLYRVFIINNSL 160 (211)
T ss_dssp EEETTEECCCEECCCBCHHHHCBCCCC-EEECC------CCCEEEC--CCCGGGGCSSCSSCHHHHTTCEEEEEEC----
T ss_pred EECCCCcCCCEecCcccccccCccCCC-EEEEEEcC-CEEEEEEEC--CCCccccCCCceeeehhcceeEEEEEEEECCC
Confidence 999999999887777766544555677 48777655 589999995 433 3442 3569999887654
Q ss_pred CCccccceeeecCccceEEecCCCCCceEEEEEEEEec--CCCCCCCC
Q psy12061 539 DMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN--GGDGRMSS 584 (626)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~--~G~g~~s~ 584 (626)
.. ...........+.|.+|+|++.|.|+|+|+.. ...|++|.
T Consensus 161 ~~----~~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~ 204 (211)
T 3g9v_A 161 EK----EQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSE 204 (211)
T ss_dssp ------CEEEEEESSCCCC----------CEEEEEEETTTTEECCCCC
T ss_pred cc----EEEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCC
Confidence 32 12223346678899999999999999999964 23577774
No 351
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=6.4e-16 Score=122.59 Aligned_cols=96 Identities=24% Similarity=0.402 Sum_probs=80.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc-CCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG-SGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~-~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.|.|.|+|||..+. .+.++.+..+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 20 v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (118)
T 2eo9_A 20 VAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEF 99 (118)
T ss_dssp EETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECC
T ss_pred EcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeC
Confidence 5689999999999999999999999999986 467888888999999999999999999999999999888899999876
Q ss_pred Cce-eeeCCCceEEecCC
Q psy12061 81 PSY-YEQLPPKITIAAHR 97 (626)
Q Consensus 81 p~~-~~~~~~~~~v~~g~ 97 (626)
|.. +...+.+..+.+|.
T Consensus 100 ~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 100 GVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp SCCCCCCCCCCCCCCCCC
T ss_pred CCCccCCCCCCCccCCCC
Confidence 533 22334555555553
No 352
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=8e-16 Score=124.88 Aligned_cols=124 Identities=27% Similarity=0.417 Sum_probs=99.5
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|.+|..+.++|.+.+|..+|.++++...+.+++.|+|++|.... .+|.|.+|.|+|+..+..... ..........
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~--~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~ 77 (132)
T 1x5h_A 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPAT--QNGQITGYKIRYRKASRKSDV-TETLVSGTQL 77 (132)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTT--CCSCEEEEBCEEEETTEEEEE-ECCBCCTTCC
T ss_pred CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcC--CCceEeEEEEEEEECCCCCcc-EEEEeCCCcc
Confidence 6788899999999999998789999999999999999999987532 237799999999876543221 1111345567
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCC------CCCCCCceE
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK------APQKPPSAV 500 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~------~p~~~p~~l 500 (626)
.+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|.+. +|. +|..|
T Consensus 78 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~-~P~~l 130 (132)
T 1x5h_A 78 SQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPE-VSGPS 130 (132)
T ss_dssp EEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCCCCCCC-CCCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcccCCcccCCC-CCCCC
Confidence 799999999999999999999999999999999999885 554 55454
No 353
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=1.3e-15 Score=118.61 Aligned_cols=80 Identities=28% Similarity=0.538 Sum_probs=72.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 25 v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 25 VVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 468999999999999999999999999999988888888777 79999999999999999999999998888999987
Q ss_pred eCC
Q psy12061 79 HGP 81 (626)
Q Consensus 79 ~~p 81 (626)
.+|
T Consensus 105 ~~P 107 (107)
T 3irg_B 105 EPP 107 (107)
T ss_dssp C--
T ss_pred cCC
Confidence 654
No 354
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.61 E-value=1.5e-14 Score=121.70 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=107.5
Q ss_pred CCCCceEEEEeeeCCCCCCe-eEEEe--CCEEc-cCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPK-FVWKK--DGNII-GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~-i~W~~--~~~~i-~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
|.+|+++.|+|.+.. +.|. +.|.. ++..+ ..+.. ...|.|.+|+. | |.|.|.+.+........+.|.|
T Consensus 11 V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~~~-----~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V 82 (185)
T 1iam_A 11 LPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNN-----RKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTV 82 (185)
T ss_dssp EETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSSSS-----EEEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEE
T ss_pred EeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccCCc-----eeEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEE
Confidence 578999999999975 4554 67763 22222 11110 12489999984 4 9999999776556777889999
Q ss_pred EeCCceeeeCCCceEEecCCcEEEEEEecccC-CcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 78 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 78 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
+.+|..+...+....+.+|+.++|.|.+.+.. ...++|+|+|+++.+..... .. .. .+..|.+......|...
T Consensus 83 ~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~-~~--~~---~~~tl~~~~~reD~g~~ 156 (185)
T 1iam_A 83 YWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA-VG--EP---AEVTTTVLVRRDHHGAQ 156 (185)
T ss_dssp EBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC-CT--TT---EEEEEEEECCSSCSSCE
T ss_pred eCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC-CC--cc---ccEEEEEeceeccCCCe
Confidence 99998887777777799999999999999954 44467899999999875320 00 01 11247766554445559
Q ss_pred EEEEEEeCCC
Q psy12061 157 YECVVKSTVG 166 (626)
Q Consensus 157 Y~C~a~n~~g 166 (626)
|+|.|.|..+
T Consensus 157 ~sC~A~~~l~ 166 (185)
T 1iam_A 157 FSCRTELDLR 166 (185)
T ss_dssp EEEEEEEECG
T ss_pred EEEEEEecCc
Confidence 9999999876
No 355
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.61 E-value=6.7e-16 Score=138.57 Aligned_cols=161 Identities=16% Similarity=0.191 Sum_probs=101.3
Q ss_pred CCceEEEEeeeCCCC---C-CeeEEEeCCEEccCCC--cEEEccCC------cEEEccCCCCCCEEEEEEEEcCCCCcee
Q psy12061 4 EGGNVTIFCNPEAAP---K-PKFVWKKDGNIIGSGG--RRKIFENG------NLLISPVSRDDSGIYSCTATNVHGMDES 71 (626)
Q Consensus 4 ~G~~~~l~C~~~g~p---~-p~i~W~~~~~~i~~~~--~~~~~~~g------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 71 (626)
.|+.++|.|.+.|.+ . .+|.|+|||.++.... ......+| .|.|.....+|.|.|+|.|.|..+....
T Consensus 38 ~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~ 117 (240)
T 4acp_A 38 ISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 117 (240)
T ss_dssp SSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CE
T ss_pred cCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccc
Confidence 599999999999974 2 3899999999985321 11111222 5888877778999999999998764322
Q ss_pred eEEE----EEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCc---cCCCeeEecCCeE
Q psy12061 72 KGRL----IVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNE---LETPNINIDGGLL 144 (626)
Q Consensus 72 ~~~l----~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~---~~~~~~~~~~~~l 144 (626)
...+ .+..+|.+...++.... ..|+.++|.|.+.+..++.+.+.|+|||..+....... ..++.+ ...+.|
T Consensus 118 ~~~i~~~~~~~~~P~V~v~~~~~~~-~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~-~~~s~L 195 (240)
T 4acp_A 118 EKTISKAKGQPREPQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSF-FLYSKL 195 (240)
T ss_dssp EEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCE-EEEEEE
T ss_pred cccccccCCCCCCCEEEEECCChHH-hcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCE-EEEEEE
Confidence 2222 23345665554443322 34999999999999554557889999999875321000 000111 112355
Q ss_pred EEeecCCCCCEeEEEEEEeCCC
Q psy12061 145 EITNASFADAGEYECVVKSTVG 166 (626)
Q Consensus 145 ~i~~~~~~d~g~Y~C~a~n~~g 166 (626)
.|......+.|.|+|.+.+..-
T Consensus 196 ~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 196 TVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEHHHHHTTCCEEEEEECTTS
T ss_pred EEChHHhCCCCEEEEEEEECCC
Confidence 6655555678999999998653
No 356
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.60 E-value=7.5e-14 Score=122.46 Aligned_cols=183 Identities=13% Similarity=0.086 Sum_probs=117.4
Q ss_pred CCCceEEEee-ecceEEEEeeeccccccccceeeE-EEEEEEEecCCCcc----------ceEEEEecCccceEEEeCCc
Q psy12061 393 APQGVFSRGF-NSTAINVTWNPIELIRENIRGRLI-GHRIKYWKEDNPEE----------TAVYYLSRTTRNWALIVGLQ 460 (626)
Q Consensus 393 ~p~~~~~~~~-~~~si~l~W~~~~~~~~~~~~~i~-~Y~v~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~L~ 460 (626)
.|.++.+... ....+..+|++..... .-. .|.+.|+....... ...............+..+.
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~g~~~~-----l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~ 77 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWSTSTIQS-----LAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIF 77 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECCCC-------------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCC
T ss_pred CCEEEEEEECCCCcEEEEEecCCCcCC-----cccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHH
Confidence 5678888877 5689999999865432 122 58888876542100 01111222333457788888
Q ss_pred cCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeee-CCCEEEEEEeecCCCCCCCceeeEEEEEEEeccC
Q psy12061 461 PDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGI-NPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQD 539 (626)
Q Consensus 461 p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~-~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~ 539 (626)
..+.|.|+|.|.|..|.+. |..+.+.....+.+.||.++++... ..+.+.|+|++ |.... .+..|+|+|+..+..
T Consensus 78 ~~~~Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~--P~~~~-~~l~yev~y~~~~~~ 153 (206)
T 3v6o_A 78 LLSGYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEK--PVFPE-NNLQFQIRYGLSGKE 153 (206)
T ss_dssp TTSCEEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------CEEEEEEEEESSSS
T ss_pred hcccEEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECC--CCCCC-CcEEEEEEEEECCCC
Confidence 8999999999999988754 5567777676777789999998766 68899999995 33333 457899999876521
Q ss_pred Cccccceeee-cCccceEEecCCCCCceEEEEEEEEecCCCCCCCCCc
Q psy12061 540 MSRANDTIIP-VGNTLDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPA 586 (626)
Q Consensus 540 ~~~~~~~~~~-~~~~~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~ 586 (626)
. ....... ......+.+.+|+|++.|.|+|||.+..|.|.||+.+
T Consensus 154 ~--~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeWS 199 (206)
T 3v6o_A 154 V--QWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNWS 199 (206)
T ss_dssp C--CCEEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCCC
T ss_pred C--ceEEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCCC
Confidence 1 1222221 2233568999999999999999999988888777654
No 357
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=6.9e-15 Score=129.56 Aligned_cols=156 Identities=19% Similarity=0.254 Sum_probs=104.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--E---Ec-------cCCCcEEEccC------CcEEEccCCCCCCEEEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--N---II-------GSGGRRKIFEN------GNLLISPVSRDDSGIYSCTAT 63 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~---~i-------~~~~~~~~~~~------g~L~i~~v~~~d~G~Y~C~a~ 63 (626)
|.+|++|+|.|.+.+.+ +.|.|+|.. . .+ ...+|+.+..+ .+|.|.+++.+|+|.|.|.+.
T Consensus 13 v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (207)
T 1ypz_E 13 LHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAAD 91 (207)
T ss_dssp EETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEE
T ss_pred EccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 56899999999998764 589999842 2 12 13467777644 369999999999999999999
Q ss_pred cCCC---------C--ceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCcc
Q psy12061 64 NVHG---------M--DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 132 (626)
Q Consensus 64 n~~g---------~--~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~ 132 (626)
+..+ . ....+.|.|...+... .+| .+.+..+ .++|.|.+.+.+++.+.+.|+++ ..+....
T Consensus 92 ~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~-~~P-~v~~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~---- 163 (207)
T 1ypz_E 92 TWHISEGYELGTDKLVFGQGTQVTVEPKSQPP-AKP-SVFIMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFD---- 163 (207)
T ss_dssp CBCCCTTCCCCCCCCEECCCEEEEEECCCCCC-CCC-EEEEEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECC----
T ss_pred cCCcccccccccceeeecCccEEEEccCCCCC-CCC-eEEEeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCc----
Confidence 8743 1 1234688886532211 122 3333333 37999999986544467899999 6665321
Q ss_pred CCCeeE-ecCCeEEEeecCC-CCCEeEEEEEEeCCCce
Q psy12061 133 ETPNIN-IDGGLLEITNASF-ADAGEYECVVKSTVGKI 168 (626)
Q Consensus 133 ~~~~~~-~~~~~l~i~~~~~-~d~g~Y~C~a~n~~g~~ 168 (626)
.... ..++.+.+..... .|.|.|+|.+.|..+..
T Consensus 164 --~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 164 --PAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp --CEEEECTTSSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred --cceEEcCCCcEEEEEeecccCCCcEEEEEEECCccE
Confidence 1211 2445666655544 67899999999987654
No 358
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=8.6e-16 Score=113.85 Aligned_cols=71 Identities=18% Similarity=0.326 Sum_probs=61.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.+ |.|.|.|+|||.+|..++++.+..+| +|.|.+++.+|+|.|+|.|.|. ...+.|.|
T Consensus 18 ~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~ltV 91 (91)
T 2lvc_A 18 AITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE----CAYFTVTI 91 (91)
T ss_dssp CCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC----EEEEEEEC
T ss_pred EECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce----EEEEEEEC
Confidence 468999999999976 88999999999999998898888776 5999999999999999999654 56666654
No 359
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=1.8e-15 Score=119.44 Aligned_cols=115 Identities=18% Similarity=0.335 Sum_probs=95.8
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|.+|..+.+.|.+.+|. +|.++++...+.+++.|+|+++.. +.|.+|.|+|+..+....... ......
T Consensus 1 G~g~~S~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~------~~i~~Y~v~~~~~~~~~~~~~---~~~~~~ 70 (115)
T 1x5z_A 1 GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPPRS------DTIANYELVYKDGEHGEEQRI---TIEPGT 70 (115)
T ss_dssp CCCCCCCCCCCCCCSCCCC-CCEEEEEECSSSSEEEEEEECCSC------CCCCEEEECBEESSSCCCBCC---EECSSS
T ss_pred CCCCCCCCEEEECCCCCCC-CCccCEeeeCCCCEEEEEEcCCCC------CCccEEEEEEEeCCCCCceEE---ecCCCc
Confidence 5677888888889888887 899999999999999999998863 358899999987765443221 123446
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCC
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPP 497 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p 497 (626)
.+.|.+|+|++.|.|+|+|.|..|.|++|..+.++|....|+.||
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~pp 115 (115)
T 1x5z_A 71 SYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSSG 115 (115)
T ss_dssp EEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCCCCC
T ss_pred EEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCCCCC
Confidence 799999999999999999999999999999999999988887654
No 360
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.60 E-value=3.9e-14 Score=124.89 Aligned_cols=188 Identities=14% Similarity=0.158 Sum_probs=130.5
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCc--cCceEEEEEE
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQ--PDTKYYVKVM 470 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~--p~t~Y~v~V~ 470 (626)
+|+++++...+-..+ |+|+++.... +....|.|+|...+...+.....-.........|+++. ++..|.++|+
T Consensus 11 ~P~nv~~~s~n~~~i-L~W~p~~~~~----~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~ 85 (221)
T 4doh_R 11 KPANITFLSINMKNV-LQWTPPEGLQ----GVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR 85 (221)
T ss_dssp CCEEEEEEEETTEEE-EEEECCCCSS----CCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEE
T ss_pred CCceeEEEEECCcEE-EEEcCCCCCC----CCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEE
Confidence 689999998766664 9999975421 34668999998655443322111122344567788764 5678999999
Q ss_pred EeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCC--CCCCc---------eeeEEEEEEEeccC
Q psy12061 471 AYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS--FEEEP---------IIGYKVRVWEVDQD 539 (626)
Q Consensus 471 a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~--~~~~~---------i~~Y~i~~~~~~~~ 539 (626)
|.+..+.|.++....|........+||. +.+. ...+++.|.|.+|... .+++. ...|.|.|+..+..
T Consensus 86 A~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~ 163 (221)
T 4doh_R 86 AIWGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSN 163 (221)
T ss_dssp EESSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTT
T ss_pred EEcCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCC
Confidence 9998888888877667655555566775 8777 4668999999953321 12231 24799999987554
Q ss_pred CccccceeeecCccceEEecCCCCCceEEEEEEEEec--CCCCCCCCCcEEEeecc
Q psy12061 540 MSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLAFSN--GGDGRMSSPAITFQMGE 593 (626)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~--~G~g~~s~~~~~~~~~~ 593 (626)
.. . .. ......+.|.+|+|++.|.|+|+|... .|.|.+|.+ +++++.+
T Consensus 164 ~~--~-~~--~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~-~c~~T~~ 213 (221)
T 4doh_R 164 RT--W-SQ--CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEK-QCARTLK 213 (221)
T ss_dssp EE--E-EE--EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEE-EEEECCC
T ss_pred cE--E-EE--eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCC-EeEecCC
Confidence 21 1 11 123467899999999999999999975 689999954 6777764
No 361
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=3.2e-15 Score=119.24 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=85.2
Q ss_pred CCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceee---ecCccc
Q psy12061 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTII---PVGNTL 554 (626)
Q Consensus 478 s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~---~~~~~~ 554 (626)
+..+..+...+..+.| .+|.++++..++.+++.|+|. ++.+++++|.+|.|+|+.........+..+. .....+
T Consensus 3 ~~~s~~~~~~~~~~~P-~~P~~l~~~~~~~~sv~l~W~--p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~ 79 (124)
T 1wis_A 3 SGSSGTISSGVPPELP-GPPTNLGISNIGPRSVTLQFR--PGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDAR 79 (124)
T ss_dssp CCCSCCCCSCCCCCCC-CCCEEEEEESCCSSCEEEEEE--CCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCS
T ss_pred CCccccccccCCCCCC-ccCCCCEEEEecCCEEEEEEE--CCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCce
Confidence 3344455555555655 589999999889999999998 6778889999999998763111111122221 246778
Q ss_pred eEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 555 DADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 555 ~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
.+.+.+|.|++.|.|+|+|.|..|.|++|.+...+++.+.
T Consensus 80 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 80 SMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp EEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCS
T ss_pred EEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCC
Confidence 9999999999999999999999999999987766776643
No 362
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1e-14 Score=113.37 Aligned_cols=102 Identities=18% Similarity=0.287 Sum_probs=80.0
Q ss_pred eecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCce
Q psy12061 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 566 (626)
+|.+.+|+ +|.++++...+.+++.|+|+ +|...+|.|.+|.|+|+..+....... .......+.+.|.+|.|++.
T Consensus 2 tT~~~~P~-~p~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~ 76 (109)
T 2e7h_A 2 SSGSSGPP-AVSDIRVTRSSPSSLSLAWA--VPRAPSGAVLDYEVKYHEKGAEGPSSV--RFLKTSENRAELRGLKRGAS 76 (109)
T ss_dssp CSSCCSSC-CCCCCEEEEEETTEEEEECC--CCCCSSSCCCEEEEEEEETTCCSTTTS--EEEEESSSEEEEESCCTTSC
T ss_pred CCCCCCCC-CCCccEEEecCCCEEEEEeC--CCCCCCCcEeEEEEEEEECCCCCCcee--EEEccCCCEEEECCCCCCCe
Confidence 45666776 67899999999999999999 566788999999999987652211111 12234567999999999999
Q ss_pred EEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 567 YHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 567 Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
|.|+|+|+|.+|.|++|.+ +.+++.+.
T Consensus 77 Y~~~V~A~n~~G~g~~S~~-~~~~T~~~ 103 (109)
T 2e7h_A 77 YLVQVRARSEAGYGPFGQE-HHSQTQLD 103 (109)
T ss_dssp EEEEEEEECSSCBCCCCSC-EECCCCCC
T ss_pred EEEEEEEEeCCccCCCCCC-EEEEcCCC
Confidence 9999999999999999965 45766653
No 363
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.59 E-value=4.5e-15 Score=117.12 Aligned_cols=109 Identities=17% Similarity=0.239 Sum_probs=87.7
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.|+.|..+.++|.+..|. +|.++++...+.+++.|+|+ ++.. +.|.+|.|+|+..+.... ........+.
T Consensus 1 G~g~~S~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~--~~i~~Y~v~~~~~~~~~~----~~~~~~~~~~ 71 (115)
T 1x5z_A 1 GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWT--PPRS--DTIANYELVYKDGEHGEE----QRITIEPGTS 71 (115)
T ss_dssp CCCCCCCCCCCCCCSCCCC-CCEEEEEECSSSSEEEEEEE--CCSC--CCCCEEEECBEESSSCCC----BCCEECSSSE
T ss_pred CCCCCCCCEEEECCCCCCC-CCccCEeeeCCCCEEEEEEc--CCCC--CCccEEEEEEEeCCCCCc----eEEecCCCcE
Confidence 6788888899999988886 88999999889999999999 4543 488999999887654322 2223345689
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|.++ .+++...
T Consensus 72 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~~ 109 (115)
T 1x5z_A 72 YRLQGLKPNSLYYFRLAARSPQGLGASTAEI-SARTMQS 109 (115)
T ss_dssp EEEECCCTTCEEEECEEEECSSCEEEECCCE-EEECCCC
T ss_pred EEECCCCCCCeEEEEEEEECCCcccCCCcCE-EEecCCC
Confidence 9999999999999999999999999999664 4666543
No 364
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.59 E-value=3e-14 Score=127.36 Aligned_cols=188 Identities=14% Similarity=0.099 Sum_probs=123.5
Q ss_pred CCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEE--Ee--cCccceEE--EeCCccCceEE
Q psy12061 393 APQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYY--LS--RTTRNWAL--IVGLQPDTKYY 466 (626)
Q Consensus 393 ~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~--~~~~~~~~--i~~L~p~t~Y~ 466 (626)
+|.++.+...+...+.++|+++.... +...+|.|.|+..+......... .. ........ ..++..++.|.
T Consensus 23 ~P~nl~C~~~~~~~l~C~W~~~~~~~----~~~~~y~l~y~~~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~ 98 (227)
T 1eer_B 23 GPEELLCFTERLEDLVCFWEEAASAG----VGPGQYSFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLE 98 (227)
T ss_dssp STTSCEEEBSSSSCCEEEEEESCCSS----CCTTSEEEEEEETTSCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEE
T ss_pred CCcCCeEECCCCCEEEEEecCCCCCC----CCCccEEEEEEcCCCCceeccceeccCCCCCceEEEEeCCCcceeeEEEE
Confidence 68899999988899999999987432 23568999997653221111011 00 11112222 34778899999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCCceEEEeeeC-CCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccc
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPPSAVHIKGIN-PTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRAND 545 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~-~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~ 545 (626)
|+|.|.+..+ .....+.+.+.+++.||.++++...+ .+.+.|+|++|.....++ +..|+|+|+..+..... .
T Consensus 99 ~~V~a~~~~~----~~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~-~l~Yev~y~~~~~~~w~--~ 171 (227)
T 1eer_B 99 LRVTAASGAP----RYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPMTS-HIRYEVDVSAGQGAGSV--Q 171 (227)
T ss_dssp EEEEETTSCE----EEEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSCGG-GEEEEEEEECCSSSCCC--C
T ss_pred EEEEecCCCc----cEEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCccccc-ceEEEEEEEcCCCCCcE--E
Confidence 9999965322 22234556666667799999998764 789999999533222223 67899999865443221 1
Q ss_pred eeeecCccceEEecCCCCCceEEEEEEEEecC----C-CCCCCCCcEEEeec
Q psy12061 546 TIIPVGNTLDADIVDLSPGKRYHMRVLAFSNG----G-DGRMSSPAITFQMG 592 (626)
Q Consensus 546 ~~~~~~~~~~~~l~~L~p~~~Y~~~V~a~~~~----G-~g~~s~~~~~~~~~ 592 (626)
........+.+.|.+|.|++.|.|+|+|.... | .|+||.+. .+.+.
T Consensus 172 ~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~-~~~t~ 222 (227)
T 1eer_B 172 RVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPV-SLLTP 222 (227)
T ss_dssp EEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCE-EEEC-
T ss_pred EEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCE-EEECc
Confidence 12334467889999999999999999999752 3 38888654 46553
No 365
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.6e-14 Score=114.41 Aligned_cols=116 Identities=20% Similarity=0.231 Sum_probs=87.4
Q ss_pred CCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEE
Q psy12061 377 ESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALI 456 (626)
Q Consensus 377 ~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i 456 (626)
.|....+.+....|+.+|.++++...+.++|.|+|.++........+.+.+|+|+|+..+........ .......++|
T Consensus 5 ~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~--~~~~~~~~~v 82 (123)
T 2edd_A 5 SSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKS--EDTTSLSYTA 82 (123)
T ss_dssp CSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCC--EEESSSEEEE
T ss_pred cCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEE--EeCCceEEEe
Confidence 34555556666677779999999999999999999977543322112344999999887432221111 1223567999
Q ss_pred eCCccCceEEEEEEEeeCCCCCCCCccEEEeecCC-CCC
Q psy12061 457 VGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRK-APQ 494 (626)
Q Consensus 457 ~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~-~p~ 494 (626)
.+|+|++.|.|+|+|+|..|.|++|..+.++|.+. +|.
T Consensus 83 ~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 83 TGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp ESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred cCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 99999999999999999999999999999999988 775
No 366
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.59 E-value=2.3e-12 Score=119.79 Aligned_cols=277 Identities=12% Similarity=0.029 Sum_probs=168.7
Q ss_pred CCCCCCceEEEEEeccceEEEEecC-CCCC-CcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCc
Q psy12061 179 PPGLPGGVQVVEVHKTSATIQWTDG-ATNG-RPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWS 256 (626)
Q Consensus 179 ~P~~p~~~~~~~~~~~~~~l~W~~~-~~~~-~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 256 (626)
...||.++.+...+...+.|+|+++ ...+ .....|.+.++..+...|...... .... ..|..+
T Consensus 11 ~~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~~~w~~~~t~-------------~~~~-~~L~~~- 75 (317)
T 3qt2_A 11 SLLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKEDDYETRITE-------------SKAV-TILHMG- 75 (317)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSCEEEEESSSE-------------EEEE-CCCTTC-
T ss_pred ccCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCCcccEeeccc-------------cccc-cccCCC-
Confidence 4678999999888889999999984 3322 335789999998888888865421 1112 226544
Q ss_pred eEEEEEEEecCCccCC-CCCCCC-cccCCCCCCCCCCceeEeecCC-----------cCeEEEEEeeCCCCCcccCcceE
Q psy12061 257 TYEFKVIAGNELGYGE-PSSPSP-QYNTPADKPYQAPSRIGGGGGK-----------IGDLSISWEPLPREKQNAPNIYY 323 (626)
Q Consensus 257 ~y~~~v~a~n~~g~~~-~s~~~~-~~~~~~~~p~~~p~~~~~~~~~-----------~~~v~l~W~~~~~~~~~~~~~~y 323 (626)
|.++|++.+..|.+. +|..+. ....++..|+..|.+++..... ...+++.|++ ..+ ......|
T Consensus 76 -~~~rVrt~~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~p--G~~-~~~~t~Y 151 (317)
T 3qt2_A 76 -FSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMV--GTD-APEDTQY 151 (317)
T ss_dssp -EEEEEEEEEECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEEC--CTT-CCTTCEE
T ss_pred -eEEEEEEEECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeC--CCC-CCCCeeE
Confidence 889998877655322 333322 2223345556778899876554 4789999998 222 2335679
Q ss_pred EEEEEecCCCcceeeeeeeecce-eeEEEEeCCCc----ceeEEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceE
Q psy12061 324 KIFWRKKNDTEFQSETLKEYGNV-GIAVVRIPSEF----YYTEYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVF 398 (626)
Q Consensus 324 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~----p~~~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~ 398 (626)
.+.|+..+ .+..+..-..... ....+.+.... ....|.|.|.+.+..+.-. +....+.....+.+.||.++.
T Consensus 152 ~L~y~~~~--~~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i~-s~~~~~~l~~iVkp~PP~nL~ 228 (317)
T 3qt2_A 152 FLYYRYGS--WTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAIR-PFDQLFALHAIDQINPPLNVT 228 (317)
T ss_dssp EEEEEETT--EEEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCBC-CEEEEEEHHHHBCCCCCEEEE
T ss_pred EEEEEeCC--CCeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCcccc-ccceEEEHHHcCcCCCCceeE
Confidence 99998764 2333221111111 12344454432 2467888988776544422 222333333333334888998
Q ss_pred EEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEEEEEEEeeCC---
Q psy12061 399 SRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA--- 475 (626)
Q Consensus 399 ~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~--- 475 (626)
+.. ..+.+.|+|++|...- ...-..|+|+|+........... . ....+.+ +|.|++.|.|+|+|....
T Consensus 229 v~~-~~~~l~v~W~~P~~~~---~~~~L~Yevryr~~~~~~~~~~~--~--~~~~~~l-~l~p~~~Y~vqVR~k~~~~~~ 299 (317)
T 3qt2_A 229 AEI-EGTRMSIQWEKPVSAF---PIHCFDYEVKIHNTRNGYLQIEK--L--MTNAFIS-IIDDLSKYDVQVRAAVSSMCR 299 (317)
T ss_dssp EEE-ETTEEEEEEECCSSSS---CGGGEEEEEEEEETTTCCEEEEE--E--SSSEEEE-ECCTTCCEEEEEEEEECTTTS
T ss_pred EEE-eCCcEEEEECCCCccc---ccCceEEEEEEEeCCCCcceEEE--E--eeeEEEe-ecCCCCEEEEEEEEeecCCCC
Confidence 884 4679999999875321 11246899999876543322211 1 2344555 599999999999998542
Q ss_pred --C-CCCCCccEEE
Q psy12061 476 --G-EGPESERYLE 486 (626)
Q Consensus 476 --g-~s~~s~~~~~ 486 (626)
| .|++|..+.+
T Consensus 300 ~~g~WSeWS~~~~~ 313 (317)
T 3qt2_A 300 EAGLWSEWSQPIYV 313 (317)
T ss_dssp SCCCCCCCCCCEEE
T ss_pred CCCCcCCCCCCEEE
Confidence 2 3456655544
No 367
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.1e-14 Score=115.77 Aligned_cols=111 Identities=25% Similarity=0.310 Sum_probs=86.1
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEe-eeCCCEEEEEEeecCCCCC-CCceeeEEEEEEEeccCCccccceeeecCcc
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIK-GINPTTVHVTWRYVSPSFE-EEPIIGYKVRVWEVDQDMSRANDTIIPVGNT 553 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~-~~~~~~~~l~W~~~~~~~~-~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~ 553 (626)
|.|++|+.+.+.|....|. +|.++.+. ..+.+++.|+|+ +|.+. +..|.+|.|+|+...... .+........
T Consensus 1 G~s~~S~~~~~~t~~~~P~-~P~~~~~~~~~~~~sv~l~W~--~p~~~gg~~i~~Y~v~~~~~~~~~---~~~~~~~~~~ 74 (120)
T 2crm_A 1 GSSGSSGVVEFTTCPDKPG-IPVKPSVKGKIHSHSFKITWD--PPKDNGGATINKYVVEMAEGSNGN---KWEMIYSGAT 74 (120)
T ss_dssp CCCTTCSCCSCCSCCCCCC-CCCCCEEEEEEETTEEEEECC--CCTTCCSSCCCEEEEEEEESSSSC---CCEEEECSSC
T ss_pred CCCCCcCCEEEEeCCCCCC-CCCCCEEeeccCCCEEEEEEC--CCCcCCCCeeeEEEEEEccCCCCc---CCEEEEeccc
Confidence 6788999998998888775 66677766 678899999999 45544 458999999987654321 2223334568
Q ss_pred ceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 554 ~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.+.+.+|.|++.|.|+|+|+|..|.|++|+++ .+++..
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~-~~~T~~ 113 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESL-LVQTPA 113 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCC-CCCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccE-EEEcCC
Confidence 899999999999999999999999999999664 455554
No 368
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.58 E-value=9.5e-15 Score=133.83 Aligned_cols=170 Identities=16% Similarity=0.256 Sum_probs=108.2
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeC--CE---Ec--------------cCCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKD--GN---II--------------GSGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~--~~---~i--------------~~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. ....+.|+|. +. .+ ...+|+.+..++ +|.|.+++.+|+
T Consensus 35 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 114 (256)
T 3sob_H 35 VQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAEDT 114 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcccC
Confidence 5789999999999764 3468999973 21 11 012567665443 399999999999
Q ss_pred EEEEEEEEcCCC-----------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeC
Q psy12061 56 GIYSCTATNVHG-----------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHN 120 (626)
Q Consensus 56 G~Y~C~a~n~~g-----------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~ 120 (626)
|.|.|.+.+..+ .......|.|.. +|.+....+ ...+..|+.++|.|.+.+..++.+.+.| +
T Consensus 115 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~~g~~v~L~C~~~~~~p~~~~v~W--~ 191 (256)
T 3sob_H 115 AVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAP-SSKSTSGGTAALGCLVKDYFPEPVTVSW--N 191 (256)
T ss_dssp EEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECC-C-----TTEEEEEEEEEEEBSSCCEEEE--G
T ss_pred EEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECC-CcccccCCcEEEEEEEEEEECCCeEEEE--C
Confidence 999999987532 122345677753 333333323 3345789999999999985544567899 5
Q ss_pred CEEeccccC----CccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEEE
Q psy12061 121 GVRIGNMDL----NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVIV 176 (626)
Q Consensus 121 ~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~v 176 (626)
+..+..... .......+. ..+.|.|.....+| |.|+|.+.+..+.......+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 192 SGALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp GGTBCTTEEECCCEECTTSCEE-EEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CcccCCCeEeCCceeCCCCCEE-EEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 444432100 000011111 12478899998899 9999999999887666665544
No 369
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.3e-14 Score=115.49 Aligned_cols=111 Identities=20% Similarity=0.257 Sum_probs=86.1
Q ss_pred CCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCC-CCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 477 EGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPS-FEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 477 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~-~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
.+..+....+.|.+..|. +|.++++...+.+++.|+|+ +|. +.++.|.+|.|+|+..+.... ..........+.
T Consensus 2 ~sgss~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~ 76 (120)
T 1x5f_A 2 SSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWR--TPASDPHGDNLTYSVFYTKEGIARE--RVENTSHPGEMQ 76 (120)
T ss_dssp CCCCCSSCCCCCCCCCCC-CCEEEEEEEECSSCEEEEEE--CCSSCSSCCSSEEEEEEEETTCCCC--EEEECSSTTCSE
T ss_pred CCCCCCCEEecCCCCCCC-CCCCcEEEecCCCEEEEEEC--CCCCCCCCcEEEEEEEEEECCCCCc--eEEEeccCCccE
Confidence 344455566778877774 88999999999999999999 555 778899999999877643321 112233456889
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|.++ .+++.+
T Consensus 77 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~-~~~T~~ 113 (120)
T 1x5f_A 77 VTIQNLMPATVYIFRVMAQNKHGSGESSAPL-RVETQP 113 (120)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCE-EEECCC
T ss_pred EEeCCCCCCCEEEEEEEEECCCccCCCCCCE-EEEeCC
Confidence 9999999999999999999999999999764 466643
No 370
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=9e-15 Score=115.06 Aligned_cols=97 Identities=19% Similarity=0.324 Sum_probs=80.9
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEec----CCeEEEeecCCCCCEe
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID----GGLLEITNASFADAGE 156 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~ 156 (626)
|+.+...|....+.+|++++|.|.+.+.|.| .+.|+|++..+... .++.+. ...|.|.+++.+|+|.
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~k~~~~~~~~-------~~~~~~~~~~~~~L~I~~v~~~D~G~ 77 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPI--TCTWMKFRKQIQES-------EHMKVENSENGSKLTILAARQEHCGC 77 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSSSC--EEEEEESSSBCCCS-------SSEEEEECSSEEEEEETTCCTTTCEE
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCCCC--EEEEEECCEECcCC-------CCEEEEEcCCEEEEEECCCChhcCEE
Confidence 3344457888999999999999999999886 45899999888654 233332 4689999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCCCCCCce
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPPGLPGGV 186 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~ 186 (626)
|+|.|.|..|..+..+.|.|..+|.+|..+
T Consensus 78 Y~C~a~N~~g~~~~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 78 YTLLVENKLGSRQAQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp EEEEEECSSCEEECCEEEEEECSCSCCCCC
T ss_pred EEEEEEECCCcEEEEEEEEEECCCCCCCCC
Confidence 999999999999999999999998887654
No 371
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.58 E-value=4.3e-14 Score=124.58 Aligned_cols=192 Identities=16% Similarity=0.198 Sum_probs=135.0
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCCCc--ceeEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPSEF--YYTEYEVKV 366 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~--p~~~Y~~~v 366 (626)
.+|.++++..... ...|+|++ +...++....|.|+|+..+...|..... ..+.....+.++++. +...|.+||
T Consensus 10 p~P~nv~~~s~n~-~~iL~W~p--~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~--C~~~~~~~Cdlt~~~~~~~~~Y~~RV 84 (221)
T 4doh_R 10 PKPANITFLSINM-KNVLQWTP--PEGLQGVKVTYTVQYFIYGQKKWLNKSE--CRNINRTYCDLSAETSDYEHQYYARV 84 (221)
T ss_dssp -CCEEEEEEEETT-EEEEEEEC--CCCSSCCCCEEEEEEEETTSCCCEECGG--GSSBSSSEEECTTTTCCSSCCEEEEE
T ss_pred CCCceeEEEEECC-cEEEEEcC--CCCCCCCCeEEEEEEEECCCCCceeccc--ccCCCCCEEeCCCccccCCCCEEEEE
Confidence 4688999987654 44699998 3333466789999999877677865322 223345567777753 567899999
Q ss_pred EEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecccccccccee---------eEEEEEEEEecCC
Q psy12061 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR---------LIGHRIKYWKEDN 437 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~---------i~~Y~v~~~~~~~ 437 (626)
+|.+..+.+.|+....+........+||. +.+. ...++|.|.|.+|.....+.+|. ...|.|.||+.+.
T Consensus 85 ~A~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~ 162 (221)
T 4doh_R 85 RAIWGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKS 162 (221)
T ss_dssp EEESSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTT
T ss_pred EEEcCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCC
Confidence 99998888887765555544344444674 8777 56789999999887431110110 3589999998865
Q ss_pred CccceEEEEecCccceEEEeCCccCceEEEEEEEeeC--CCCCCCCccEEEeecCC
Q psy12061 438 PEETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN--AGEGPESERYLERTYRK 491 (626)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~--~g~s~~s~~~~~~t~~~ 491 (626)
..... .. .....+.|.+|+|++.|.|+|+|... .|.|.+|....+.|..+
T Consensus 163 ~~~~~--~~--~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 163 NRTWS--QC--VTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp TEEEE--EE--ECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred CcEEE--Ee--ecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 53321 11 23356889999999999999999975 68899999888888754
No 372
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.58 E-value=2.1e-14 Score=127.62 Aligned_cols=170 Identities=19% Similarity=0.302 Sum_probs=109.6
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cC--CeEEEeecCC-CCC
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DG--GLLEITNASF-ADA 154 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~--~~l~i~~~~~-~d~ 154 (626)
|+.+...|.+..+.+|++++|.|.+.+.|.+ .+.|+++|..+.... .++.. .+ ..|.|.+++. .|+
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~~d~ 77 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPP--SIVWRKNGKKVSGTQ------SRYTVLEQPGGISILRIEPVRAGRDD 77 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEECCTTS------TTEEEEEETTTEEEEEESSCCTTTTC
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCC--eEEEEECCEECCCCc------ceeEEEEcCCCeEEEEEEecCCCCcC
Confidence 3344446788999999999999999998876 569999999986321 23222 22 4899999999 999
Q ss_pred EeEEEEEEeCCCc-eEEEEEEEEeCCCCCCCc-eEE-------EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCc
Q psy12061 155 GEYECVVKSTVGK-ISTKTTVIVEGPPGLPGG-VQV-------VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTW 225 (626)
Q Consensus 155 g~Y~C~a~n~~g~-~~~~~~l~v~~~P~~p~~-~~~-------~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w 225 (626)
|.|+|.+.|..|. .+..+.|.|..++..|.. +.+ .......+.|.|.... .+... +. |
T Consensus 78 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g---~p~p~--i~--------W 144 (212)
T 2yd1_A 78 APYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIG---NPTPN--IY--------W 144 (212)
T ss_dssp SEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEEC---SSCCE--EE--------E
T ss_pred ceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEecc---CCCCe--EE--------E
Confidence 9999999999998 788899999876443211 111 1123455666666421 11111 22 3
Q ss_pred eEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccCC
Q psy12061 226 FNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGE 272 (626)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~ 272 (626)
.+....+.............+.+.+ +...+.+.|+|.|.|..|...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~ 190 (212)
T 2yd1_A 145 IKNQTKVDMSNPRYSLKDGFLQIEN-SREEDQGKYECVAENSMGTEH 190 (212)
T ss_dssp EETTEECCTTSTTEEEETTEEEECS-CCGGGCEEEEEEEEETTEEEE
T ss_pred EECCeEcccCCCeEEccCCeEEEcc-CChhhCEEEEEEeecCCCcee
Confidence 3322211100000000112456655 899999999999999998653
No 373
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.58 E-value=6.7e-15 Score=111.90 Aligned_cols=89 Identities=22% Similarity=0.363 Sum_probs=73.8
Q ss_pred eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe----cCCeEEEeecCCCCCEeEE
Q psy12061 83 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI----DGGLLEITNASFADAGEYE 158 (626)
Q Consensus 83 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~ 158 (626)
.+...|.++.+.+|++++|.|.+.|.|.|. +.|+|||..+.... ..++.+ ....|.|.+++.+|+|.|+
T Consensus 7 ~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~--v~W~k~g~~i~~~~-----~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 7 KIEALPSDISIDEGKVLTVACAFTGEPTPE--VTWSCGGRKIHSQE-----QGRFHIENTDDLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EECCCCSEEEEETTSEEEEEEEEEEESCCE--EEEEETTEECCTTG-----GGTEEEEECSSEEEEEESSCCGGGCEEEE
T ss_pred EEEeCCCcEEEeCCCeEEEEEEEEEecCCE--EEEEECceEeeeec-----cceeeeecccceEEEEEcCCCccCCEEEE
Confidence 344568899999999999999999999875 58999999987542 123332 2247999999999999999
Q ss_pred EEEEeCCCceEEEEEEEEeC
Q psy12061 159 CVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 159 C~a~n~~g~~~~~~~l~v~~ 178 (626)
|.|.|..|..+..+.|.|+.
T Consensus 80 C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 80 LSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCEEEEEEEEEEEE
Confidence 99999999999999999874
No 374
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.58 E-value=4e-15 Score=114.82 Aligned_cols=79 Identities=24% Similarity=0.346 Sum_probs=71.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|||..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 20 VPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp EETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 468999999999999999999999999999888888776654 59999999999999999999999999989999885
Q ss_pred eC
Q psy12061 79 HG 80 (626)
Q Consensus 79 ~~ 80 (626)
..
T Consensus 100 ~~ 101 (103)
T 3qp3_A 100 GG 101 (103)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 375
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.58 E-value=8.3e-15 Score=111.45 Aligned_cols=77 Identities=27% Similarity=0.472 Sum_probs=69.4
Q ss_pred CCCCceEEEEeeeCCC-CCCeeEEEeCCEEccCCCcEEEc-cCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAA-PKPKFVWKKDGNIIGSGGRRKIF-ENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~-p~p~i~W~~~~~~i~~~~~~~~~-~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|. |.|.|.|+|++..+..+.++.+. .++ +|.|.+++.+|+|.|+|.|.|..|...+.+.|.|
T Consensus 13 v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 13 GEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp ECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEE
Confidence 5789999999999997 99999999999999888888773 445 7999999999999999999999999888888887
Q ss_pred E
Q psy12061 78 L 78 (626)
Q Consensus 78 ~ 78 (626)
.
T Consensus 93 ~ 93 (97)
T 2bk8_A 93 K 93 (97)
T ss_dssp T
T ss_pred E
Confidence 4
No 376
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.58 E-value=4.3e-15 Score=116.94 Aligned_cols=81 Identities=31% Similarity=0.599 Sum_probs=72.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC-CCcEEEccCC----cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFENG----NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~-~~~~~~~~~g----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+.. ..++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 27 v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 106 (116)
T 2kkq_A 27 VLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLD 106 (116)
T ss_dssp EETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEE
Confidence 56899999999999999999999999999974 5677776554 799999999999999999999999998999999
Q ss_pred EEeCCc
Q psy12061 77 VLHGPS 82 (626)
Q Consensus 77 v~~~p~ 82 (626)
|..+|.
T Consensus 107 V~~~p~ 112 (116)
T 2kkq_A 107 VTARPN 112 (116)
T ss_dssp EECCSC
T ss_pred EeCCCC
Confidence 987664
No 377
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.58 E-value=4.1e-15 Score=111.12 Aligned_cols=73 Identities=22% Similarity=0.251 Sum_probs=63.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
|.+|++++|.|.+.+ |+|.|.|+|||.+|..+.|+.+..+| +|.|.+++.+|+|.|+|.|.|. ..++.|.|.
T Consensus 17 v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~----~~sa~L~V~ 91 (93)
T 1waa_A 17 VFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT----KSAANLKVK 91 (93)
T ss_dssp EETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE----EEEEEEEEE
T ss_pred EeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC----cEEEEEEEE
Confidence 568999999999987 45899999999999988898887766 6999999999999999999874 567888885
Q ss_pred e
Q psy12061 79 H 79 (626)
Q Consensus 79 ~ 79 (626)
.
T Consensus 92 ~ 92 (93)
T 1waa_A 92 E 92 (93)
T ss_dssp C
T ss_pred c
Confidence 3
No 378
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.4e-14 Score=114.47 Aligned_cols=107 Identities=21% Similarity=0.289 Sum_probs=85.0
Q ss_pred CCCCccEEEeec-C-CCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 478 GPESERYLERTY-R-KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 478 s~~s~~~~~~t~-~-~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|+.|..+.++|. + ..| .+|.++++...+.+++.|+|+ +|...++.|.+|.|+|+..+.... .......+.
T Consensus 1 G~~S~~~~~~T~~~~~~P-~~P~~l~~~~~~~~si~l~W~--~p~~~~~~i~~Y~v~~~~~~~~~~-----~~~~~~~~~ 72 (116)
T 1x5g_A 1 GSSGSSGRVETQPEVQLP-GPAPNLRAYAASPTSITVTWE--TPVSGNGEIQNYKLYYMEKGTDKE-----QDVDVSSHS 72 (116)
T ss_dssp CCCCCCCCCSSCCCSSCC-CCCSSCEEEEEETTEEEEECC--CCSCCSSCCSEEEEEEEETTCCCC-----CCEEECSSE
T ss_pred CCCccCeEEEcCCCCCCC-cCCCccEEEecCCCEEEEEEe--CCCCCCCcccEEEEEEEECCCCcc-----EEEecCCce
Confidence 466777888885 3 445 588899999999999999999 566678899999999887654322 122335789
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|.++. +++.+
T Consensus 73 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~-~~T~~ 109 (116)
T 1x5g_A 73 YTINGLKKYTEYSFRVVAYNKHGPGVSTPDVA-VRTLS 109 (116)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCCCCBCCCCC-EECCC
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEE-EECCC
Confidence 99999999999999999999999999997654 55554
No 379
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.7e-15 Score=122.22 Aligned_cols=77 Identities=19% Similarity=0.410 Sum_probs=67.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC----------------------------EEc-cCCCcEEEccCC---cEEEcc
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG----------------------------NII-GSGGRRKIFENG---NLLISP 49 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~----------------------------~~i-~~~~~~~~~~~g---~L~i~~ 49 (626)
|.+|++++|.|.+.|.|.|.|.|+|+| ..| ....|+.+..++ +|.|.+
T Consensus 30 v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L~I~~ 109 (139)
T 1gxe_A 30 VVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEG 109 (139)
T ss_dssp ESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEEECSC
T ss_pred EeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEEEECC
Confidence 578999999999999999999999998 555 345677776555 499999
Q ss_pred CCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 50 VSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 50 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 110 v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 110 AEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp CCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999999999999998888888874
No 380
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.6e-14 Score=112.33 Aligned_cols=101 Identities=22% Similarity=0.367 Sum_probs=81.3
Q ss_pred eecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCce
Q psy12061 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 566 (626)
+|.+.+|. +|.++++...+.+++.|+|+ +|...+|.|.+|.|+|+..+... ..........+.+.|.+|.|++.
T Consensus 2 tT~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~ 75 (108)
T 2djs_A 2 SSGSSGPS-TVPIMHQVSATMRSITLSWP--QPEQPNGIILDYEIRYYEKEHNE---FNSSMARSQTNTARIDGLRPGMV 75 (108)
T ss_dssp CSCCCCCC-CCSCCEEEEECSSEEEEECC--CCSCCSSCEEEEEEEEEETTSCS---TTCEEEEESSSEEEEESCCTTCE
T ss_pred ccCCCCCC-CCcceEEEecCCCEEEEEEC--CCCCCCCeEEEEEEEEEECCCCC---cceeEEecCccEEEEcCCCCCCE
Confidence 45666776 77899999999999999999 66778899999999988765432 11233446778999999999999
Q ss_pred EEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 567 YHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 567 Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
|.|+|+|+|..|.|++|.++ .+++.+.
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~-~~~T~~~ 102 (108)
T 2djs_A 76 YVVQVRARTVAGYGKFSGKM-CFQTLTD 102 (108)
T ss_dssp EEEEEEEEESSCEEEECCCE-EEECCCS
T ss_pred EEEEEEEEeCCEECCCCCCE-EEEeCCC
Confidence 99999999999999999664 5666643
No 381
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=8.5e-15 Score=115.99 Aligned_cols=79 Identities=20% Similarity=0.357 Sum_probs=68.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc-CC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~-~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+. ..++.+.. ++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 36 v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 36 RKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVV 114 (118)
T ss_dssp EESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEE
T ss_pred EECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 4689999999999999999999999999997 34555443 23 49999999999999999999999998889999997
Q ss_pred eCC
Q psy12061 79 HGP 81 (626)
Q Consensus 79 ~~p 81 (626)
..|
T Consensus 115 ~~P 117 (118)
T 2e7c_A 115 EKA 117 (118)
T ss_dssp CCC
T ss_pred cCC
Confidence 765
No 382
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=5.6e-15 Score=113.06 Aligned_cols=77 Identities=27% Similarity=0.436 Sum_probs=68.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc--cCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~--~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+. .++ +|.|.+++.+|+|.|+|.|.|..|...+.+.|.|
T Consensus 17 v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 17 VGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96 (99)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEE
Confidence 468999999999999999999999999999877776654 233 6999999999999999999999999998888888
Q ss_pred E
Q psy12061 78 L 78 (626)
Q Consensus 78 ~ 78 (626)
.
T Consensus 97 ~ 97 (99)
T 1g1c_A 97 Q 97 (99)
T ss_dssp E
T ss_pred e
Confidence 5
No 383
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=6.3e-15 Score=117.75 Aligned_cols=116 Identities=25% Similarity=0.298 Sum_probs=92.0
Q ss_pred CccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccce---EEEEecCccceE
Q psy12061 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA---VYYLSRTTRNWA 454 (626)
Q Consensus 378 s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~---~~~~~~~~~~~~ 454 (626)
|..+.++|.+.+|..+|.++++...+.+++.|+|++|.... .+|.|.+|.|+|+..+...+.. ...........+
T Consensus 3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~--~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (122)
T 1va9_A 3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKEL--QNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVY 80 (122)
T ss_dssp CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSST--TCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEE
T ss_pred CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcC--CCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEE
Confidence 45566778888898789999999999999999999987522 2377999999998877543211 111122344679
Q ss_pred EEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCCC
Q psy12061 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQK 495 (626)
Q Consensus 455 ~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~ 495 (626)
.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+++|..
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~ 121 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSS 121 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999887763
No 384
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.5e-14 Score=114.49 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=92.8
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-ccceEEEEecCcc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLSRTTR 451 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~ 451 (626)
|.|.+|..+.+.|....|. +|.++++...+.+++.|+|.++... ++.|.+|.|+|+..... .+... .....
T Consensus 1 G~s~~S~~~~~~t~~~~P~-~P~~~~~~~~~~~sv~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~ 72 (118)
T 1x3d_A 1 GSSGSSGAEIFTTLSCEPD-IPNPPRIANRTKNSLTLQWKAPSDN----GSKIQNFVLEWDEGKGNGEFCQC---YMGSQ 72 (118)
T ss_dssp CCCCCCCCCCCCCCCSCCC-CCCCCEEEEEETTEEEEECCCCCCC----SSCEEEEEEEECTTTSSSCCEEE---EEESC
T ss_pred CCCCCCcCEEEEcCCCCCc-CCCCcEEeccCCCEEEEEECCCCCC----CCcceEEEEEEecCCCCCCeEEe---eccCC
Confidence 5677888888888888887 8889999999999999999998743 26799999998765542 22222 22234
Q ss_pred ceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 452 NWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 452 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
..+.+.+|+|++.|.|+|+|.|..|.|++|....+.|....|.
T Consensus 73 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~ 115 (118)
T 1x3d_A 73 KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGP 115 (118)
T ss_dssp SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCc
Confidence 6799999999999999999999999999999999999877665
No 385
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.4e-14 Score=113.33 Aligned_cols=111 Identities=18% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCcee----eEEEEEEEeccCCccccceeeecCcc
Q psy12061 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPII----GYKVRVWEVDQDMSRANDTIIPVGNT 553 (626)
Q Consensus 478 s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~----~Y~i~~~~~~~~~~~~~~~~~~~~~~ 553 (626)
+..|....+.+....|+.+|.+|++...+.+++.|+|+ ++...++.+. +|.|+|+..+.... .. .......
T Consensus 3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~--~p~~~~~~i~~~~~~Y~v~y~~~~~~~~-~~--~~~~~~~ 77 (123)
T 2edd_A 3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWA--DNSVPKNQKTSEVRLYTVRWRTSFSASA-KY--KSEDTTS 77 (123)
T ss_dssp SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEE--CSSSCSSCCCSCCCCEEEEEEETTCTTC-CC--CCEEESS
T ss_pred CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEec--CCCCCcccccCcCceEEEEEEECCCCCc-cE--EEEeCCc
Confidence 34455566677777788899999999999999999999 4554555444 99999987643211 11 2223357
Q ss_pred ceEEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 554 LDADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 554 ~~~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+++.|.||+|++.|.|+|+|+|..|.|++|.+ +.++|.+.
T Consensus 78 ~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~-v~~~T~~~ 117 (123)
T 2edd_A 78 LSYTATGLKPNTMYEFSVMVTKNRRSSTWSMT-AHATTYEA 117 (123)
T ss_dssp SEEEEESCCTTCEEEEEEEECCSSSCCCCCCC-EEEECCCS
T ss_pred eEEEecCCCCCCEEEEEEEEeCCCcccCCCCC-EEEEccCC
Confidence 89999999999999999999999999999965 55666643
No 386
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.57 E-value=6.5e-15 Score=112.96 Aligned_cols=79 Identities=22% Similarity=0.283 Sum_probs=67.9
Q ss_pred CCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEE--c--c----CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEE
Q psy12061 3 GEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKI--F--E----NGNLLISPVSRDDSGIYSCTATNVHGMDESKGR 74 (626)
Q Consensus 3 ~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~--~--~----~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 74 (626)
..|+.+.|.|.+.|.|.|+|.|+|||.+|..+.++.+ . . .++|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4688999999999999999999999999987765422 1 1 234999999999999999999999999999999
Q ss_pred EEEEeCC
Q psy12061 75 LIVLHGP 81 (626)
Q Consensus 75 l~v~~~p 81 (626)
|.|...|
T Consensus 94 l~V~~~P 100 (103)
T 1wwb_X 94 AHFMGWP 100 (103)
T ss_dssp ECCSCCC
T ss_pred EEECCCC
Confidence 9886655
No 387
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.57 E-value=4.9e-15 Score=112.04 Aligned_cols=74 Identities=20% Similarity=0.373 Sum_probs=67.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.| |.|.|+|+|..+..+.|+.+. +++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 21 v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 21 VHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT-GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp ECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC-SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe-CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 56899999999999998 899999999999887887765 778999999999999999999999999888888776
No 388
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.57 E-value=1.4e-13 Score=122.92 Aligned_cols=191 Identities=16% Similarity=0.101 Sum_probs=128.7
Q ss_pred CCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeee---ecceeeEEEEe--CCCcceeEEEE
Q psy12061 290 APSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKE---YGNVGIAVVRI--PSEFYYTEYEV 364 (626)
Q Consensus 290 ~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~L~p~~~Y~~ 364 (626)
.|.++.........+.++|++. .+.++....|.+.|+..+ ..|..+.... ........+.+ .++..++.|.|
T Consensus 23 ~P~nl~C~~~~~~~l~C~W~~~--~~~~~~~~~y~l~y~~~~-~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~ 99 (227)
T 1eer_B 23 GPEELLCFTERLEDLVCFWEEA--ASAGVGPGQYSFSYQLED-EPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLEL 99 (227)
T ss_dssp STTSCEEEBSSSSCCEEEEEES--CCSSCCTTSEEEEEEETT-SCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEE
T ss_pred CCcCCeEECCCCCEEEEEecCC--CCCCCCCccEEEEEEcCC-CCceeccceeccCCCCCceEEEEeCCCcceeeEEEEE
Confidence 6889998888889999999993 344445788999998764 3344332111 11222333333 45677889999
Q ss_pred EEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeee-cceEEEEeeeccccccccceeeEEEEEEEEecCCCccceE
Q psy12061 365 KVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFN-STAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443 (626)
Q Consensus 365 ~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~-~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~ 443 (626)
+|.|.|..+ . ....+.....+++.+|.++++...+ .+.+.|+|++|..... ++ +..|.|+|+..+...+...
T Consensus 100 ~V~a~~~~~--~--~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~--~~-~l~Yev~y~~~~~~~w~~~ 172 (227)
T 1eer_B 100 RVTAASGAP--R--YHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPETPM--TS-HIRYEVDVSAGQGAGSVQR 172 (227)
T ss_dssp EEEETTSCE--E--EEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSCSC--GG-GEEEEEEEECCSSSCCCCE
T ss_pred EEEecCCCc--c--EEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCccc--cc-ceEEEEEEEcCCCCCcEEE
Confidence 999976332 1 1233444454555599999998764 7899999998875321 12 7899999987765444332
Q ss_pred EEEecCccceEEEeCCccCceEEEEEEEeeCC----C-CCCCCccEEEeecCC
Q psy12061 444 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA----G-EGPESERYLERTYRK 491 (626)
Q Consensus 444 ~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~----g-~s~~s~~~~~~t~~~ 491 (626)
. ........+.|.+|+|++.|.|+|+|.... | .|++|..+.+.|..+
T Consensus 173 ~-~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~~d 224 (227)
T 1eer_B 173 V-EILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTPSD 224 (227)
T ss_dssp E-EECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC---
T ss_pred E-EEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECccc
Confidence 2 223345679999999999999999999642 3 378898888888543
No 389
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.57 E-value=2e-14 Score=109.58 Aligned_cols=99 Identities=23% Similarity=0.394 Sum_probs=77.3
Q ss_pred CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCc-cceEEEEecCccceEEEeCCccCceEEE
Q psy12061 389 MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKYYV 467 (626)
Q Consensus 389 ~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~v 467 (626)
.|..+|.++.+...+.+++.|+|++|..... +|.|.+|.|.|+..+... ..............+.|.+|+|++.|.|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~--ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v 80 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNN--NTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDI 80 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-------CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhc--CCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEE
Confidence 5777899999999999999999999864322 488999999999876542 1212223334456799999999999999
Q ss_pred EEEEeeCCCCCCCCccEEEeec
Q psy12061 468 KVMAYNNAGEGPESERYLERTY 489 (626)
Q Consensus 468 ~V~a~~~~g~s~~s~~~~~~t~ 489 (626)
+|+|+|..|.|++|..+.++|+
T Consensus 81 ~V~A~n~~G~G~~S~~~~~~T~ 102 (102)
T 3n1f_C 81 KMQCFNEGGESEFSNVMICETK 102 (102)
T ss_dssp EEEEEETTEECCCCCCEEEECC
T ss_pred EEEEECCCcCCCCCCCEEeecC
Confidence 9999999999999999888874
No 390
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.57 E-value=2.2e-14 Score=114.00 Aligned_cols=111 Identities=22% Similarity=0.267 Sum_probs=82.4
Q ss_pred CCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEec
Q psy12061 480 ESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIV 559 (626)
Q Consensus 480 ~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 559 (626)
.+......+....| .+|.++.+...+.+++.|.|+ ++.+++++|.+|.|+|+...................+.+.+.
T Consensus 5 ~~~~~~~~~~~~~P-~~P~~~~~~~~~~~sv~l~W~--p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~ 81 (121)
T 1x4z_A 5 SSGSQPDHGRLSPP-EAPDRPTISTASETSVYVTWI--PRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEIT 81 (121)
T ss_dssp CCCCCCCSSSCCCC-CCCCCCEEEECCSSEEEEECC--CCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEE
T ss_pred cccceeccCcCCCC-ccCCCCEEEEccCCEEEEEEE--CCCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEEC
Confidence 33333344444444 588899999999999999999 577788889999999987652111111111224577899999
Q ss_pred CCCCCceEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 560 DLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 560 ~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
+|.|++.|.|+|+|+|..|.|++|.+...+++..
T Consensus 82 ~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~ 115 (121)
T 1x4z_A 82 GLEKGISYKFRVRALNMLGESEPSAPSRPYVVSG 115 (121)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCCCCCCCEECCS
T ss_pred CCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCC
Confidence 9999999999999999999999998776666654
No 391
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.57 E-value=8.1e-15 Score=134.53 Aligned_cols=130 Identities=18% Similarity=0.238 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEEEEcCCCCceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCc---ceeEEEeeC--CEEe
Q psy12061 50 VSRDDSGIYSCTATNVHGMDESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL---DVAYIWTHN--GVRI 124 (626)
Q Consensus 50 v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p---~~~i~W~~~--~~~~ 124 (626)
|+.+|+|.|+|.|. |.....+.+.+..+|.+ ...|..+.+.+|++++|.|.+.+.|.. ...+.|+|+ |..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~-~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVM-TQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp ------------------------------CCCE-EEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeE-EeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 78999999999998 55555555555555544 445788999999999999999998731 235699974 3322
Q ss_pred ccc-----cCCccCCCeeEe----cCCeEEEeecCCCCCEeEEEEEEeCCCce-EEEEEEEEeCCCCCC
Q psy12061 125 GNM-----DLNELETPNINI----DGGLLEITNASFADAGEYECVVKSTVGKI-STKTTVIVEGPPGLP 183 (626)
Q Consensus 125 ~~~-----~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p 183 (626)
... ........++.. ....|.|.+++.+|+|.|+|.|.|..+.. .....|.|...+.+|
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P 155 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAP 155 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCC
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCC
Confidence 100 000000133332 22389999999999999999999886643 334467776544334
No 392
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3e-14 Score=113.13 Aligned_cols=102 Identities=20% Similarity=0.282 Sum_probs=80.3
Q ss_pred EEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCC
Q psy12061 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564 (626)
Q Consensus 485 ~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 564 (626)
.+.+.+..| .+|.++++...+.+++.|+|+ +|.+.++.|.+|.|+|+..+.... ..........+.+.|.+|+|+
T Consensus 10 ~~~~~~~~P-~~P~~l~~~~~~~~sv~l~W~--~p~~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~ 84 (119)
T 2ed7_A 10 AIPSSSVLP-SAPRDVVPVLVSSRFVRLSWR--PPAEAKGNIQTFTVFFSREGDNRE--RALNTTQPGSLQLTVGNLKPE 84 (119)
T ss_dssp SCCCSSSSC-CCCSCCEEEEECSSCEEEECC--CCSCCSSCEEEEEEEEEESSCCCC--EEEECCCTTCCEEEECSCCSS
T ss_pred cCCCCCCCC-cCCcceEEEecCCCEEEEEEe--CCCCCCCcEEEEEEEEEeCCCCcc--eeeEeecCCceEEEeCCCCCC
Confidence 345666666 589999999999999999999 666778999999999876654322 112233456789999999999
Q ss_pred ceEEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 565 KRYHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 565 ~~Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
+.|.|+|+|+|..|.|++|+++. +++.
T Consensus 85 t~Y~~~V~A~n~~G~g~~S~~~~-~~T~ 111 (119)
T 2ed7_A 85 AMYTFRVVAYNEWGPGESSQPIK-VATQ 111 (119)
T ss_dssp SEEEECCEEEESSCBCSCCCCEE-EECC
T ss_pred CEEEEEEEEEcCCccCCCcCCEE-EEeC
Confidence 99999999999999999997654 5554
No 393
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=7.2e-15 Score=112.03 Aligned_cols=78 Identities=19% Similarity=0.361 Sum_probs=69.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.|.| |.|.|+|++..+....++.+. +++|.|.+++.+|+|.|+|.|.|..|.....+.|.|...|
T Consensus 15 v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 92 (99)
T 2cr3_A 15 VHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT-GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92 (99)
T ss_dssp BCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC-SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCSCC
T ss_pred EeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE-CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEecCC
Confidence 57899999999999987 799999999999877787775 6789999999999999999999999998888888886554
No 394
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.56 E-value=8.9e-15 Score=112.15 Aligned_cols=78 Identities=27% Similarity=0.411 Sum_probs=67.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCc--EEEccCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR--RKIFENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~--~~~~~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+....+ +....++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 17 ~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 17 IDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp EETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 46899999999999999999999999999976543 3334444 7999999999999999999999999888899988
Q ss_pred Ee
Q psy12061 78 LH 79 (626)
Q Consensus 78 ~~ 79 (626)
..
T Consensus 97 ~~ 98 (100)
T 2kdg_A 97 LA 98 (100)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 395
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.56 E-value=1.3e-14 Score=133.09 Aligned_cols=187 Identities=16% Similarity=0.156 Sum_probs=109.6
Q ss_pred CCCCceEEEEeeeCCCCCC-eeEEEe--CCEEc-cCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-KFVWKK--DGNII-GSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-~i~W~~--~~~~i-~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
|.+|+++.|+|.+.. +.| .+.|.. ++..+ ..+... ..|.|.+++.+ |.|+|.+..........+.|.|
T Consensus 11 V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~~-----~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V 82 (291)
T 1mq8_A 11 LPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNR-----KVYELSNVQED--SQPMCYSNCPDGQSTAKTFLTV 82 (291)
T ss_dssp ECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSSE-----EEEEEESCCSC--CCCEEEEECSSCEEEEECEEEE
T ss_pred EcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCce-----EEEEEEecccC--CeEEEEEEcCCccEEEEEEEEE
Confidence 679999999999964 555 488864 12112 111111 13788888854 4699999755334555678999
Q ss_pred EeCCceeeeCCCceEEecCCcEEEEEEecccCCc-ceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEe
Q psy12061 78 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELL-DVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGE 156 (626)
Q Consensus 78 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~ 156 (626)
+.+|..+...+....+.+|+.++|.|.+.+..++ .++|+|+|+++.+...... .. .....|.+......|.+.
T Consensus 83 ~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~---~~---~~~~~l~~~~~~~D~g~~ 156 (291)
T 1mq8_A 83 YWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAV---GE---PAEVTTTVLVRRDHHGAN 156 (291)
T ss_dssp CBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECC---BT---TEEEEEECCCSSSCSSCE
T ss_pred ecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCC---CC---CceEEEEeeeeeccCCce
Confidence 8888776655555568899999999999986543 4678999999988754210 00 112356666666666679
Q ss_pred EEEEEEeCCCc--------eEEEEEEEEeCCCCCCCceEE--EEEeccceEEEEec
Q psy12061 157 YECVVKSTVGK--------ISTKTTVIVEGPPGLPGGVQV--VEVHKTSATIQWTD 202 (626)
Q Consensus 157 Y~C~a~n~~g~--------~~~~~~l~v~~~P~~p~~~~~--~~~~~~~~~l~W~~ 202 (626)
|+|.|.|..+. .+....|.|..+|.....+.. ....+..++|.|..
T Consensus 157 ~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~ 212 (291)
T 1mq8_A 157 FSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSL 212 (291)
T ss_dssp EEEEEEEECGGGTSCEEEECCCCEECBC----------------------------
T ss_pred EEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEc
Confidence 99999987652 355668888877644222211 12345667777774
No 396
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.56 E-value=9.9e-15 Score=130.82 Aligned_cols=167 Identities=16% Similarity=0.208 Sum_probs=106.6
Q ss_pred CCCCceEEEEeeeCCC--CCCeeEEEeCC--E---Ec---c-----------CCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEAA--PKPKFVWKKDG--N---II---G-----------SGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~--p~p~i~W~~~~--~---~i---~-----------~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
|.+|++|+|.|.+.+. +...+.|+|.. . .+ . ..+|+.+..++ +|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (226)
T 3mlr_H 12 KQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDT 91 (226)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGGC
T ss_pred EecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcccC
Confidence 5789999999999763 34689999832 1 11 0 12566665433 399999999999
Q ss_pred EEEEEEEEcCCC---------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCE
Q psy12061 56 GIYSCTATNVHG---------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGV 122 (626)
Q Consensus 56 G~Y~C~a~n~~g---------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~ 122 (626)
|.|.|.+.+..+ .....+.|.|.. +|.+... +....+..|+.++|.|.+.+..++.+.+.| ++.
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~ 168 (226)
T 3mlr_H 92 GKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPL-APSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSG 168 (226)
T ss_dssp EEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEE-EEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGG
T ss_pred EEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEe-cCcccccCCCCEEEEEEEEEEECCCeEEEE--CCc
Confidence 999999987531 112335666643 3333322 222334689999999999996554578899 433
Q ss_pred EeccccC----CccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEE
Q psy12061 123 RIGNMDL----NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTT 173 (626)
Q Consensus 123 ~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~ 173 (626)
.+..... .......+. -.+.|.|......| |.|+|.+.|..+.......
T Consensus 169 ~~~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 169 ALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 221 (226)
T ss_dssp TCCTTEEECCCEECTTSCEE-EEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEE
T ss_pred cccCCeEeCCcEECCCCCEE-EEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEE
Confidence 3321100 000011111 12478899998889 9999999998876554443
No 397
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.56 E-value=1.1e-13 Score=123.04 Aligned_cols=172 Identities=23% Similarity=0.299 Sum_probs=109.5
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCCeEEEeec-CCCCCE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGGLLEITNA-SFADAG 155 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~-~~~d~g 155 (626)
+|.+. ..|.+..+.+|++++|.|.+.+.|.+ .+.|+++|..+..... ..... ....|.|.++ ..+|+|
T Consensus 6 ~P~~~-~~p~~~~v~~G~~v~L~C~~~g~p~~--~v~W~k~~~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~~d~G 77 (212)
T 2yd6_A 6 PPRFT-RTPVDQTGVSGGVASFICQATGDPRP--KIVWNKKGKKVSNQRF-----EVIEFDDGSGSVLRIQPLRTPRDEA 77 (212)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEECCCTTE-----EEEEEGGGTEEEEEECSCCTTTTCE
T ss_pred CCeEE-eCcceeEEecCCeEEEEEEEeeCCCC--EEEEEECCcCCCCCce-----eEEEEcCCCceEEEEeccCCCCCCe
Confidence 44444 45778899999999999999998876 5699999999875421 11111 2356999999 599999
Q ss_pred eEEEEEEeCCCceEEEEEEEEeCCCC----CCCce----EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceE
Q psy12061 156 EYECVVKSTVGKISTKTTVIVEGPPG----LPGGV----QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFN 227 (626)
Q Consensus 156 ~Y~C~a~n~~g~~~~~~~l~v~~~P~----~p~~~----~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~ 227 (626)
.|+|.|.|..|..+..+.|.|..++. .|... .........+.|.|... +.+... +. |.+
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~--v~--------W~~ 144 (212)
T 2yd6_A 78 IYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAAS---GNPDPE--IT--------WFK 144 (212)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEE---CSSCCE--EE--------EEE
T ss_pred EEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEec---CCCCCe--EE--------EEE
Confidence 99999999999998899999976532 22110 01122345667777642 112111 22 222
Q ss_pred eecceeee------eeeccCCceeEEEEeeccCCceEEEEEEEecCCccCCC
Q psy12061 228 VSEHVIGK------EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYGEP 273 (626)
Q Consensus 228 ~~~~~~~~------~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~~~ 273 (626)
.+..+... ..........+.+.+ +...+.+.|+|.|.|..|....
T Consensus 145 ~g~~l~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 145 DFLPVDTSNNNGRIKQLRSESIGALQIEQ-SEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp TTEEC------CCEEEEEETTEEEEEECS-CCGGGCEEEEEEEEETTEEEEC
T ss_pred CCccccCcCCCceEEEEecCCeEEEEEcC-CCcccCEEEEEEEECCCCcccc
Confidence 22111100 000001223455555 8999999999999999996543
No 398
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=1.7e-14 Score=111.13 Aligned_cols=99 Identities=21% Similarity=0.320 Sum_probs=75.5
Q ss_pred cCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCc-eeeEEEEEEEeccCCcccc-ceeeecCccceEEecCCCCCce
Q psy12061 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP-IIGYKVRVWEVDQDMSRAN-DTIIPVGNTLDADIVDLSPGKR 566 (626)
Q Consensus 489 ~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~-i~~Y~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~~~ 566 (626)
.+++|. +|.++.+...+.+ +.|+|+ +|...+|. |.+|.|+|+..+...+... ..+......+.+.|.+|.|++.
T Consensus 3 ~~~~P~-~P~~~~~~~~~~~-v~l~W~--~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 3 HMDTPS-SPSIDQVEPYSST-AQVQFD--EPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCCCCC-CCEEEEEEECSSC-EEEEEE--CCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCE
T ss_pred CCCCCc-CCCCCEEEEcCCc-EEEEEc--CCcccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCE
Confidence 355676 4889998888877 999999 66777777 9999999987654422111 1122223568899999999999
Q ss_pred EEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 567 YHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 567 Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
|.|+|+|+|..|.|++|++. .|+|.
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~-~~~T~ 103 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAAS-EFKTQ 103 (105)
T ss_dssp EEEEEEEEETTEECCCCCCE-EEECC
T ss_pred EEEEEEEEcCCccCCCcCCE-eeEEe
Confidence 99999999999999999664 56665
No 399
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.56 E-value=7.1e-15 Score=134.67 Aligned_cols=169 Identities=16% Similarity=0.250 Sum_probs=105.3
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CE---Ec-------------cCCCcEEEccCC-----cEEEccCCCCCCE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GN---II-------------GSGGRRKIFENG-----NLLISPVSRDDSG 56 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~---~i-------------~~~~~~~~~~~g-----~L~i~~v~~~d~G 56 (626)
|.+|++|+|.|.+.+.+ ...|.|+|. +. .+ ...+|+.+..++ +|.|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG 91 (263)
T 3iu4_H 12 VAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTA 91 (263)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHCE
Confidence 57899999999997643 468999973 21 11 013577665443 3999999999999
Q ss_pred EEEEEEEcCCC--------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEe
Q psy12061 57 IYSCTATNVHG--------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRI 124 (626)
Q Consensus 57 ~Y~C~a~n~~g--------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~ 124 (626)
.|.|.+.+..+ .....+.|.|.. +|.+....+. ..+..|+.++|.|.+.+.++..+++.| ++..+
T Consensus 92 ~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~ 168 (263)
T 3iu4_H 92 MYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPS-SKGSTSGTAALGCLVKDYFPEPVTVSW--NSGAL 168 (263)
T ss_dssp EEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCC-CCC----EEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred EEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCc-cccccCCcEEEEEEEEeEeCCceEEEE--CCccc
Confidence 99999987641 112345777753 3444333332 234589999999999997644478899 44333
Q ss_pred cccc--C--CccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 125 GNMD--L--NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 125 ~~~~--~--~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
.... . ....+..+. ..+.|.|......| |.|+|.+.|..+.......+.
T Consensus 169 ~~~~~~~~~~~~~~g~~~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 169 TSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp CTTEEECCCEECTTSCEE-EEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred CCceeecCceECCCCCEE-EEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 2110 0 000011111 12468888887778 999999999988755544444
No 400
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.56 E-value=2.1e-14 Score=112.40 Aligned_cols=103 Identities=24% Similarity=0.424 Sum_probs=82.6
Q ss_pred EEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCC
Q psy12061 485 LERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564 (626)
Q Consensus 485 ~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 564 (626)
.++|.+..|. +|.++++...+.+++.|.|+ +|...++.|.+|.|+|+..+... ..........+.+.|.+|.|+
T Consensus 3 ~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~ 76 (111)
T 1x5l_A 3 SGSSGQAAPS-QVVVIRQERAGQTSVSLLWQ--EPEQPNGIILEYEIKYYEKDKEM---QSYSTLKAVTTRATVSGLKPG 76 (111)
T ss_dssp CCCCSCCCCC-CCCCEECSCBCSSCEEEEEC--CCSCCCSCCCEEEEEEEESSSCC---SSCEEEEESSSEEEECSCCTT
T ss_pred eEEcCCCCCC-CCceEEEEEcCCCEEEEEEC--CCCCCCCEEEEEEEEEEECCCCc---eeEEEecCCCCEEEEcCCCCC
Confidence 4677877776 67899988889999999999 66777899999999988765321 222334557789999999999
Q ss_pred ceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 565 ~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.|+|+|+|..|.|++|++ +.+++.+.
T Consensus 77 t~Y~~~V~A~n~~G~g~~S~~-~~~~T~~~ 105 (111)
T 1x5l_A 77 TRYVFQVRARTSAGCGRFSQA-MEVETGKP 105 (111)
T ss_dssp CEEEECEEEEETTEECCCCCC-EEEECCCT
T ss_pred CEEEEEEEEEeCCcCCCCccc-EEEEcCCC
Confidence 999999999999999999966 45666653
No 401
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.56 E-value=9.4e-15 Score=111.82 Aligned_cols=77 Identities=30% Similarity=0.546 Sum_probs=70.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 18 v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 18 VSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEE
Confidence 468999999999999999999999999999888888887665 69999999999999999999999998888888874
No 402
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=2.4e-14 Score=113.04 Aligned_cols=111 Identities=23% Similarity=0.339 Sum_probs=89.8
Q ss_pred CCCCccEEEEcc-C-CCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 375 GPESEVVTIFSA-E-DMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 375 ~~~s~~~~~~t~-~-~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|++|..+.++|. + ..|. +|.++++...+.+++.|+|++|... ++.+.+|.|+|+..+...+... .....
T Consensus 1 G~~S~~~~~~T~~~~~~P~-~P~~l~~~~~~~~si~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~----~~~~~ 71 (116)
T 1x5g_A 1 GSSGSSGRVETQPEVQLPG-PAPNLRAYAASPTSITVTWETPVSG----NGEIQNYKLYYMEKGTDKEQDV----DVSSH 71 (116)
T ss_dssp CCCCCCCCCSSCCCSSCCC-CCSSCEEEEEETTEEEEECCCCSCC----SSCCSEEEEEEEETTCCCCCCE----EECSS
T ss_pred CCCccCeEEEcCCCCCCCc-CCCccEEEecCCCEEEEEEeCCCCC----CCcccEEEEEEEECCCCccEEE----ecCCc
Confidence 355677777774 2 5665 8899999999999999999998643 3679999999988765544221 22456
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.+.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+..|+
T Consensus 72 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 113 (116)
T 1x5g_A 72 SYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGP 113 (116)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCC
Confidence 799999999999999999999999999999999999988775
No 403
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=4e-15 Score=113.76 Aligned_cols=76 Identities=24% Similarity=0.399 Sum_probs=66.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+....+.....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 23 v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 23 VIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp ECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEEE
T ss_pred EeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEE
Confidence 5789999999999999999999999999997665555444558999999999999999999999999888777776
No 404
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.55 E-value=1.2e-13 Score=120.87 Aligned_cols=172 Identities=14% Similarity=0.216 Sum_probs=108.3
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEec--CCeEEEeecCCCCCEeE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINID--GGLLEITNASFADAGEY 157 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~g~Y 157 (626)
+|.+ ..+|.+..+.+|++++|.|.+.+.|.+ .+.|+|+|..+..... ...++... ...|.|.+++..|+|.|
T Consensus 5 ~P~~-~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~---~~~~~~~~~~~~~L~i~~~~~~d~G~Y 78 (194)
T 2a38_A 5 APTF-TQPLQSVVVLEGSTATFEAHISGFPVP--EVSWFRDGQVISTSTL---PGVQISFSDGRAKLTIPAVTKANSGRY 78 (194)
T ss_dssp EEEE-EECCCCEEEETTSCEEEEEEEEEESCC--EEEEEESSSBCCTTTS---TTCEEEEETTEEEEEESSCCGGGCEEE
T ss_pred CCeE-EccCCceEEECCCEEEEEEEEEecCCC--EEEEEECCEEcccccC---CceEEEeCCCEEEEEECCCCcccCEEE
Confidence 3444 446788999999999999999998876 4699999998875431 11233333 34899999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEeCCCCCCCce----EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeeccee
Q psy12061 158 ECVVKSTVGKISTKTTVIVEGPPGLPGGV----QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233 (626)
Q Consensus 158 ~C~a~n~~g~~~~~~~l~v~~~P~~p~~~----~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~ 233 (626)
+|.+.|..|.....+.|.|...+.+|... .........+.|.|.... .+... +. |.+.+..+.
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g---~p~~~--v~--------W~~~~~~~~ 145 (194)
T 2a38_A 79 SLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTG---IPTPV--VK--------FYRDGAEIQ 145 (194)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEE---ESCCE--EE--------EEETTEECC
T ss_pred EEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEE---ecCCe--EE--------EEECCEECC
Confidence 99999999998888888888644333211 011222344555555311 01111 22 222211110
Q ss_pred ee---eeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 234 GK---EVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 234 ~~---~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.. ..........+.+.+ +...+.+.|+|.|.|..|..
T Consensus 146 ~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~ 185 (194)
T 2a38_A 146 SSLDFQISQEGDLYSLLIAE-AYPEDSGTYSVNATNSVGRA 185 (194)
T ss_dssp CSSSEEEEEETTEEEEEEEE-ECGGGCEEEEEEEEETTEEE
T ss_pred CCCcEEEEEcCCEEEEEECC-CChhcCeEEEEEEEeCCCce
Confidence 00 000001222456655 89999999999999998854
No 405
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.55 E-value=6.5e-15 Score=110.96 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=64.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCC--EEccCCCcEEEcc-CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDG--NIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~--~~i~~~~~~~~~~-~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|+++.|.|.+.|.|.|.|.|+|+| ..+....+..... .++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 14 v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 14 IKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp ECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEE
Confidence 578999999999999999999999999 8886554333222 246999999999999999999999998888888876
No 406
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.55 E-value=4.6e-14 Score=110.74 Aligned_cols=106 Identities=25% Similarity=0.355 Sum_probs=83.4
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCc-cceEEEEecCccceEEEeCCccCceE
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPE-ETAVYYLSRTTRNWALIVGLQPDTKY 465 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y 465 (626)
+.+|+.+|.++++...+.++|.|+|++|..... ++.|.+|.|+|+..+... ..............+.|.+|+|++.|
T Consensus 5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~--~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 82 (114)
T 1x4y_A 5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNN--NTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSY 82 (114)
T ss_dssp CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSC--CCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEE
T ss_pred ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhc--CCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEE
Confidence 557777999999999999999999999863222 478999999997765541 11111122344466999999999999
Q ss_pred EEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 466 YVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 466 ~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.|+|+|+|..|.|++|..+.++|.+..++
T Consensus 83 ~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 83 DIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp EEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred EEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 99999999999999999999999876543
No 407
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.54 E-value=9e-15 Score=113.98 Aligned_cols=81 Identities=25% Similarity=0.520 Sum_probs=62.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc-CCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE-NGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHG 80 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~-~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 80 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+..+.++.+.. +++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 22 v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 22 TSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGA 101 (108)
T ss_dssp EETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC-
T ss_pred EeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCC
Confidence 4689999999999999999999999999998766666554 457999999999999999999999999999999999776
Q ss_pred Cc
Q psy12061 81 PS 82 (626)
Q Consensus 81 p~ 82 (626)
|.
T Consensus 102 ~~ 103 (108)
T 3kvq_A 102 QE 103 (108)
T ss_dssp --
T ss_pred Cc
Confidence 54
No 408
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=1.2e-14 Score=115.07 Aligned_cols=110 Identities=27% Similarity=0.414 Sum_probs=83.4
Q ss_pred CCCCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccce
Q psy12061 476 GEGPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLD 555 (626)
Q Consensus 476 g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~ 555 (626)
|.+..+..+.++|.+++|. +|.++++...+.+++.|+|+ +|... |.|.+|.|+|+..+.... ..........+.
T Consensus 1 Gss~~~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~--~p~~~-g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~ 74 (118)
T 2yrz_A 1 GSSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQ--EPRCE-RPLQGYSVEYQLLNGGEL--HRLNIPNPAQTS 74 (118)
T ss_dssp CCCCCCSCCTTSSSCSCCC-CCCCCEECCCBTTEEEEECC--CCCCS-SCEEEEEEEEEBSSSCCE--EEEEESCTTCCE
T ss_pred CCCCCCCcceeecCCCCCC-CCCceEEEeCCCCEEEEEeC--CCCCC-CCccEEEEEEEECCCCce--EEEEcCCCCcCE
Confidence 3444555677888888886 78899999899999999999 45444 799999999876544311 111223356789
Q ss_pred EEecCCCCCceEEEEEEEEecCCCCCCCCCcEEEee
Q psy12061 556 ADIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQM 591 (626)
Q Consensus 556 ~~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~ 591 (626)
+.|.+|+|++.|.|+|+|+|..|.|++|++.+.+.+
T Consensus 75 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t 110 (118)
T 2yrz_A 75 VVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIES 110 (118)
T ss_dssp EEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCC
Confidence 999999999999999999999999999865443433
No 409
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.54 E-value=1.9e-13 Score=119.09 Aligned_cols=184 Identities=13% Similarity=0.192 Sum_probs=129.8
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEe-----cCCCcceeeeeeeecceeeEEEEeCC-CcceeEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRK-----KNDTEFQSETLKEYGNVGIAVVRIPS-EFYYTEY 362 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-L~p~~~Y 362 (626)
.+|.++++..... ...|+|++++ .......|.|+|+. .+...|....... +.....+.+++ +..+..|
T Consensus 8 p~P~nv~~~s~n~-~~iL~W~p~~---~~~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~--~i~~~~Cdlt~~~~~~~~Y 81 (206)
T 4doh_B 8 PAPQQLSVLSTNM-KHLLMWSPVI---APGETVYYSVEYQGEYESLYTSHIWIPSSWCS--LTEGPECDVTDDITATVPY 81 (206)
T ss_dssp CCCCCCEEEEETT-EEEEECCCCC---CSSSCCEEEEEEEEHHHHHHSTTCCEEEEEEE--EESSSEEECTTTCCSSSCE
T ss_pred CCCCeeEEEEeCC-EEEEEECCCC---CCCCCEEEEEEEEEeccccCCCccceeccccc--CCCCCEEcCCccccCCCCE
Confidence 4688999877654 4799999842 22334789999995 4567887643332 33445666774 6668899
Q ss_pred EEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccce
Q psy12061 363 EVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETA 442 (626)
Q Consensus 363 ~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~ 442 (626)
.+||+|.+..+.+.|+....+......-.+|| .+.+. ....+|.|.|.++ +.+..|.|.||+.+......
T Consensus 82 ~~RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP-~v~v~-~~~~~i~V~~~~p--------~~~l~Y~v~y~~~~~~~~~~ 151 (206)
T 4doh_B 82 NLRVRATLGSQTSAWSILKHPFNRQSTILTRP-GMEIT-KDGFHLVIELEDL--------GPQFEFLVAYWRREPGAEEH 151 (206)
T ss_dssp EEEEEEEETTEECCCEECSSCBCGGGCBCCCC-CEEEE-EETTEEEEEECCC--------CTTCEEEEEEEESSSSCCCE
T ss_pred EEEEEEEcCCCccCccccccccchhhcccCCC-eEEEE-eCCCEEEEEecCC--------CCcEEEEEEEEEcCCCceeE
Confidence 99999999988888766544433322222255 47776 5788999999976 33678999999987664422
Q ss_pred EEEEecCccceEEEeCCccCceEEEEEEEeeC--CCCCCCCccEEEeec
Q psy12061 443 VYYLSRTTRNWALIVGLQPDTKYYVKVMAYNN--AGEGPESERYLERTY 489 (626)
Q Consensus 443 ~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~--~g~s~~s~~~~~~t~ 489 (626)
. .........+.|.+|+|++.|.|+|+|... .+.|.+|....+.|.
T Consensus 152 ~-~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~ 199 (206)
T 4doh_B 152 V-KMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQ 199 (206)
T ss_dssp E-EEECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC-
T ss_pred E-eEEccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEcc
Confidence 1 222333456899999999999999999986 377888988877775
No 410
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.54 E-value=1.8e-14 Score=110.16 Aligned_cols=77 Identities=29% Similarity=0.469 Sum_probs=66.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCc-EEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR-RKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~-~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+..+.+ +.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 17 v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 17 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp EETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEE
Confidence 46899999999999999999999999999976544 4444444 5999999999999999999999999888888888
Q ss_pred E
Q psy12061 78 L 78 (626)
Q Consensus 78 ~ 78 (626)
.
T Consensus 97 ~ 97 (99)
T 1u2h_A 97 R 97 (99)
T ss_dssp E
T ss_pred E
Confidence 5
No 411
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.54 E-value=3e-15 Score=115.64 Aligned_cols=76 Identities=25% Similarity=0.526 Sum_probs=69.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccC---CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+..+ ++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 26 v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 26 VYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp ESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEE
T ss_pred EeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEE
Confidence 57899999999999999999999999999988888887653 47999999999999999999999999888888887
No 412
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=111.90 Aligned_cols=100 Identities=18% Similarity=0.368 Sum_probs=80.5
Q ss_pred eecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCce
Q psy12061 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 566 (626)
+|.++.|+.+|.++++...+.+++.|+|++++....++.|.+|.|+|+..+.. .........+.+.|.+|.|++.
T Consensus 2 ~t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~-----~~~~~~~~~~~~~i~~L~p~t~ 76 (103)
T 2edy_A 2 SSGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ-----QELQNITTDTRFTLTGLKPDTT 76 (103)
T ss_dssp TTTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC-----CEEEEEESSSCCEECSCCTTCC
T ss_pred CCCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC-----ccEEEcCCcceEEEcCCCCCCE
Confidence 35667788899999999889999999999543367789999999998776542 1223345678899999999999
Q ss_pred EEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 567 YHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 567 Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
|.|+|+|+|..|.|++|.++. ++|.
T Consensus 77 Y~~~V~A~n~~G~g~~S~~~~-~~T~ 101 (103)
T 2edy_A 77 YDIKVRAWTSKGSGPLSPSIQ-SRTM 101 (103)
T ss_dssp EEEECCEECSSCBCCCCCCCC-CCCC
T ss_pred EEEEEEEECCCCCCCCCCCEE-EEec
Confidence 999999999999999997643 5554
No 413
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.53 E-value=1.8e-14 Score=120.08 Aligned_cols=86 Identities=30% Similarity=0.405 Sum_probs=72.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEcc--CC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFE--NG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~--~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+.. ++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 53 v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 53 VVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 132 (154)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEE
Confidence 5689999999999999999999999999998888887753 23 7999999999999999999999999999999999
Q ss_pred EeCCceeeeC
Q psy12061 78 LHGPSYYEQL 87 (626)
Q Consensus 78 ~~~p~~~~~~ 87 (626)
..+|.....+
T Consensus 133 ~~~p~~~~~~ 142 (154)
T 1fhg_A 133 ETMGKEGEGE 142 (154)
T ss_dssp ECC-------
T ss_pred eCcCcCCCCC
Confidence 8887665543
No 414
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=5e-14 Score=109.52 Aligned_cols=106 Identities=20% Similarity=0.240 Sum_probs=81.7
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEE
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
+..|+.+|.++++...+.++|.|+|.++........+.+.+|.|+|+........ ..........++|.+|+|+|.|.
T Consensus 5 ~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~--~~~~~~~~~~~~i~gL~P~T~Y~ 82 (113)
T 1x5j_A 5 SSGPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--YKNANATTLSYLVTGLKPNTLYE 82 (113)
T ss_dssp SCCCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--CEECCBCSSEEEEESCCTTCEEC
T ss_pred cCCCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE--EEEEecCcCEEEeCCCCCCcEEE
Confidence 3456679999999999999999999988754432122345999999873222211 12233456679999999999999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCC-CCC
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRK-APQ 494 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~-~p~ 494 (626)
|+|+|++..|.|++|..+.++|.+. +|.
T Consensus 83 f~V~A~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 83 FSVMVTKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp CEEEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred EEEEEecCCccCCCcccEEeeccCCCCCC
Confidence 9999999999999999999999987 765
No 415
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.5e-14 Score=112.92 Aligned_cols=81 Identities=36% Similarity=0.509 Sum_probs=71.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC-CCcEEEccC--C--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS-GGRRKIFEN--G--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~-~~~~~~~~~--g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+.. ..++.+..+ + +|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 20 v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 99 (110)
T 2dm2_A 20 IFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLM 99 (110)
T ss_dssp EETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEE
T ss_pred EeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 56899999999999999999999999999975 566666543 4 599999999999999999999999998889999
Q ss_pred EEeCCc
Q psy12061 77 VLHGPS 82 (626)
Q Consensus 77 v~~~p~ 82 (626)
|..+|.
T Consensus 100 V~~~~~ 105 (110)
T 2dm2_A 100 VQAVNS 105 (110)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 977653
No 416
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=108.66 Aligned_cols=106 Identities=25% Similarity=0.307 Sum_probs=84.5
Q ss_pred ccCCCCCCCCCceEEEee--ecceEEEEeeeccccccccceeeEEEEEEEEecCCCccc-eEEEEecCccceEEEeCCcc
Q psy12061 385 SAEDMPQVAPQGVFSRGF--NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEET-AVYYLSRTTRNWALIVGLQP 461 (626)
Q Consensus 385 t~~~~p~~~p~~~~~~~~--~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p 461 (626)
|.+++|+.+|.++++... +.+++.|+|++|... +|.|.+|.|+|+........ ............+.|.+|+|
T Consensus 3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 78 (114)
T 2ede_A 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEA----NGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNL 78 (114)
T ss_dssp CCCCCCCSCCEEEEEEECSSCSSCEEEEEECCSSC----SSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCS
T ss_pred CCCCCCCCCCcceEEEEccCCCCEEEEEECCCCCC----CCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCC
Confidence 557788779999999987 789999999998643 36799999999875543211 12233345667799999999
Q ss_pred CceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 462 ~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
++.|.|+|+|.|..|.|++|..+.++|.+..|+
T Consensus 79 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 79 DTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp SCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 999999999999999999999999999876543
No 417
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=1.4e-14 Score=110.14 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=73.1
Q ss_pred CCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEE
Q psy12061 493 PQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572 (626)
Q Consensus 493 p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~ 572 (626)
|+.+|.+|.+.. ..+++.|+|+ +|.+++++|++|.|+|+..+..+. ........+.+++.+.+|.+++.|.|||.
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~--pP~~~~~~I~gY~vey~~~~~~W~--~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~ 81 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWD--PPELVPKRLDGYVLEGRQGSQGWE--VLDPAVAGTETELLVPGLIKDVLYEFRLV 81 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEE--CCSCCSSCCCBEEEEEEETTCCCE--EEEEEECSSCCEEECCCCCTTSCEECCBE
T ss_pred CCCCCcceEEEE-eCCEEEEEEC--CCCCCCCCCcEEEEEEEeCCCCcE--EeeeecCCCcCEEEeCCCCCCCEEEEEEE
Confidence 346899999875 5678999999 667788999999999987333221 11112456789999999999999999999
Q ss_pred EEecCCCCCCCCCcEEEeec
Q psy12061 573 AFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 573 a~~~~G~g~~s~~~~~~~~~ 592 (626)
|+|..|.|++|++. .++|.
T Consensus 82 A~n~~G~s~pS~~~-~v~T~ 100 (108)
T 1v5j_A 82 AFAGSFVSDPSNTA-NVSTS 100 (108)
T ss_dssp EEETTEEEEECSCC-CCCCS
T ss_pred EEcCCCCcCCCCCE-EEEeC
Confidence 99999999999654 35554
No 418
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=4.3e-14 Score=112.41 Aligned_cols=113 Identities=25% Similarity=0.255 Sum_probs=89.6
Q ss_pred CCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecc-ccccccceeeEEEEEEEEecCCCccceEEEEecCccceE
Q psy12061 376 PESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIE-LIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWA 454 (626)
Q Consensus 376 ~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~-~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 454 (626)
..+....+.|....|. +|.++++...+.+++.|+|++|. .. +|.|.+|.|+|+..+...+. ...........+
T Consensus 4 gss~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~~----~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~ 77 (120)
T 1x5f_A 4 GSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPASDP----HGDNLTYSVFYTKEGIARER-VENTSHPGEMQV 77 (120)
T ss_dssp CCCSSCCCCCCCCCCC-CCEEEEEEEECSSCEEEEEECCSSCS----SCCSSEEEEEEEETTCCCCE-EEECSSTTCSEE
T ss_pred CCCCCEEecCCCCCCC-CCCCcEEEecCCCEEEEEECCCCCCC----CCcEEEEEEEEEECCCCCce-EEEeccCCccEE
Confidence 3345555667777776 89999999999999999999986 32 36799999999877544332 223334456779
Q ss_pred EEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 455 LIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 455 ~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.|.+|+|++.|.|+|+|+|..|.|++|..+.++|....|+
T Consensus 78 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pP 117 (120)
T 1x5f_A 78 TIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESGP 117 (120)
T ss_dssp EECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCCS
T ss_pred EeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCCC
Confidence 9999999999999999999999999999999999866554
No 419
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.53 E-value=1.5e-14 Score=139.61 Aligned_cols=98 Identities=22% Similarity=0.277 Sum_probs=68.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccC----CCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGS----GGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~----~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.| |+|.|.|++++..+.. +.|+.+ .+|+|.|.+|+.+|+|.|+|.|.|..|.....+.|.|
T Consensus 258 v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 335 (361)
T 2xot_A 258 AHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKV 335 (361)
T ss_dssp EETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEEEEEEEE
Confidence 568999999999999 9999999997765432 237777 8899999999999999999999999999999999988
Q ss_pred EeCCceeeeCCCceEEecCCcEEEEEEecccCCcce
Q psy12061 78 LHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDV 113 (626)
Q Consensus 78 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~ 113 (626)
...+ ..|++++|.|.+.|.|.|.+
T Consensus 336 ~~~~------------~~g~~~~l~C~~~g~P~P~i 359 (361)
T 2xot_A 336 YNFT------------LHGHHDTLNAAADPWSHPQF 359 (361)
T ss_dssp ESSC------------CC------------------
T ss_pred Eeee------------ccCCceEEEEEeCCCCCCcc
Confidence 4422 67889999999999998865
No 420
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.52 E-value=1e-14 Score=127.43 Aligned_cols=185 Identities=13% Similarity=0.083 Sum_probs=106.6
Q ss_pred CCCceeEeecCCcCeEEEEEeeCCCCCcccCcceEEEEEEecCCCcceeeeeeeecceeeEEEEeCC--CcceeEEEEEE
Q psy12061 289 QAPSRIGGGGGKIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDTEFQSETLKEYGNVGIAVVRIPS--EFYYTEYEVKV 366 (626)
Q Consensus 289 ~~p~~~~~~~~~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--L~p~~~Y~~~v 366 (626)
.+|.++++....... .|+|+++ ....+....|.|+|+..+...|....... +.....+.+++ +.+...|.+||
T Consensus 9 p~P~nv~~~s~n~~~-iL~W~p~--~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~--~i~~~~Cdlt~~~~~~~~~Y~~RV 83 (211)
T 3g9v_A 9 LKPQRVQFQSRNFHN-ILQWQPG--RALTGNSSVYFVQYKIYGQRQWKNKEDCW--GTQELSCDLTSETSDIQEPYYGRV 83 (211)
T ss_dssp CCCEEEEEEEETTEE-EEEEECC--CC---CCCEEEEEEEETTCSSCEEEEEEE--EECCSEEECTGGGCSTTSCEEEEE
T ss_pred CCCceeEEEEEcCce-EEEECCC--CCCCCCCeEEEEEEEECCCCceEECccCC--CCCCCEECCCCcccccCccEEEEE
Confidence 468999997766544 5999984 33333467899999988777887543222 22334555653 46789999999
Q ss_pred EEecCCCCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeecccccccccee--------eEEEEEEEEecCCC
Q psy12061 367 QAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR--------LIGHRIKYWKEDNP 438 (626)
Q Consensus 367 ~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~--------i~~Y~v~~~~~~~~ 438 (626)
+|.+..+.|.|+....+.+..+...+|| .+.+.... ++|.|.|++|.......+|. ...|.|.||+.+..
T Consensus 84 ~A~~~~~~S~ws~~~~f~~~~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~ 161 (211)
T 3g9v_A 84 RAASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLE 161 (211)
T ss_dssp EEEETTEECCCEECCCBCHHHHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC-----
T ss_pred EEECCCCcCCCEecCcccccccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCc
Confidence 9999988888876655555333334466 48777654 58999999987531111121 36799999887554
Q ss_pred ccceEEEEecCccceEEEeCCccCceEEEEEEEeeCC--CCCCCCcc
Q psy12061 439 EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNA--GEGPESER 483 (626)
Q Consensus 439 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~--g~s~~s~~ 483 (626)
... .........+.|.+|+|++.|.|+|+|.... ..|++|..
T Consensus 162 ~~~---~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~ 205 (211)
T 3g9v_A 162 KEQ---KVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEE 205 (211)
T ss_dssp -CE---EEEEESSCCCC----------CEEEEEEETTTTEECCCCCC
T ss_pred cEE---EEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCC
Confidence 321 1222344558899999999999999998642 23555543
No 421
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=3.5e-14 Score=112.63 Aligned_cols=106 Identities=21% Similarity=0.234 Sum_probs=87.0
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRN 452 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 452 (626)
|.|.+|..+.++|.+++|. +|.++++...+.+++.|+|++|... +|.|.+|.|+|+..+...... .........
T Consensus 1 G~g~~S~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~ 74 (119)
T 1wfn_A 1 GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPGEK----NGILTGYRISWEEYNRTNTRV-THYLPNVTL 74 (119)
T ss_dssp CCCCCSCCCSCCSSCCSCC-CCSCCEEESCCSSEEEEECCCCTTC----CSCCCEEEEEEEESSCGGGCC-CEEECSSCC
T ss_pred CCCCCCCCEEEECCCCCCC-CCCceEEEECCCCEEEEEEcCCCCC----CCcEEEEEEEEEECCCCCceE-EEEeCCCce
Confidence 6778888899999998887 7889999999999999999998743 377999999998776443221 123345567
Q ss_pred eEEEeCCccCceEEEEEEEeeCCCCCCCCccE
Q psy12061 453 WALIVGLQPDTKYYVKVMAYNNAGEGPESERY 484 (626)
Q Consensus 453 ~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~ 484 (626)
.+.|.+|+|++.|.|+|+|.|..|.|++|..+
T Consensus 75 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 75 EYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 79999999999999999999999999988765
No 422
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.6e-13 Score=106.53 Aligned_cols=101 Identities=21% Similarity=0.340 Sum_probs=80.8
Q ss_pred ccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-ccceEEEEecCccceEEEeCCccCc
Q psy12061 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLSRTTRNWALIVGLQPDT 463 (626)
Q Consensus 385 t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t 463 (626)
|.+.+|. +|.++++...+.+++.|+|++|... +|.|.+|.|+|+..+.. ....... ......+.|.+|+|++
T Consensus 3 T~~~~P~-~p~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~t 75 (109)
T 2e7h_A 3 SGSSGPP-AVSDIRVTRSSPSSLSLAWAVPRAP----SGAVLDYEVKYHEKGAEGPSSVRFL--KTSENRAELRGLKRGA 75 (109)
T ss_dssp SSCCSSC-CCCCCEEEEEETTEEEEECCCCCCS----SSCCCEEEEEEEETTCCSTTTSEEE--EESSSEEEEESCCTTS
T ss_pred CCCCCCC-CCCccEEEecCCCEEEEEeCCCCCC----CCcEeEEEEEEEECCCCCCceeEEE--ccCCCEEEECCCCCCC
Confidence 5566776 7889999999999999999998643 37799999999887622 2221111 2334579999999999
Q ss_pred eEEEEEEEeeCCCCCCCCccEEEeecCCC
Q psy12061 464 KYYVKVMAYNNAGEGPESERYLERTYRKA 492 (626)
Q Consensus 464 ~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~ 492 (626)
.|.|+|+|+|..|.|++|..+.++|.+..
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 76 SYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp CEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred eEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 99999999999999999999999988653
No 423
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-13 Score=109.84 Aligned_cols=106 Identities=23% Similarity=0.347 Sum_probs=85.6
Q ss_pred EEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccC
Q psy12061 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462 (626)
Q Consensus 383 ~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 462 (626)
+.+.+..|. +|.++++...+.+++.|+|++|... ++.|.+|.|+|+......+.. ..........+.+.+|+|+
T Consensus 11 ~~~~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~ 84 (119)
T 2ed7_A 11 IPSSSVLPS-APRDVVPVLVSSRFVRLSWRPPAEA----KGNIQTFTVFFSREGDNRERA-LNTTQPGSLQLTVGNLKPE 84 (119)
T ss_dssp CCCSSSSCC-CCSCCEEEEECSSCEEEECCCCSCC----SSCEEEEEEEEEESSCCCCEE-EECCCTTCCEEEECSCCSS
T ss_pred CCCCCCCCc-CCcceEEEecCCCEEEEEEeCCCCC----CCcEEEEEEEEEeCCCCccee-eEeecCCceEEEeCCCCCC
Confidence 445566775 8999999999999999999998743 377999999998776544332 2233345677999999999
Q ss_pred ceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 463 TKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 463 t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
+.|.|+|+|+|..|.|++|..+.++|....|+
T Consensus 85 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pP 116 (119)
T 2ed7_A 85 AMYTFRVVAYNEWGPGESSQPIKVATQPESGP 116 (119)
T ss_dssp SEEEECCEEEESSCBCSCCCCEEEECCCCSCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 99999999999999999999999999876554
No 424
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=8e-14 Score=107.55 Aligned_cols=94 Identities=22% Similarity=0.285 Sum_probs=73.7
Q ss_pred CCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEE
Q psy12061 493 PQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVL 572 (626)
Q Consensus 493 p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~ 572 (626)
++.+|.++++...+.+++.|+|+ +|.+.++.|.+|.|+|+..+.. . ........+.+.+.+|.|++.|.|+|+
T Consensus 7 ~P~~P~~~~~~~~s~~sv~l~W~--~p~~~g~~i~~Y~v~~~~~~~~----~-~~~~~~~~~~~~v~~L~p~t~Y~frV~ 79 (106)
T 1x4x_A 7 GPDQCKPPQVTCRSATCAQVNWE--VPLSNGTDVTEYRLEWGGVEGS----M-QICYCGPGLSYEIKGLSPATTYYCRVQ 79 (106)
T ss_dssp SCCCCCCCCCEEEETTEEEEECC--CCSCSSSCCCEEEEEEESSTTS----C-CEEEEESCSEEEEESCCSSCEEEEEEE
T ss_pred CcCCCCCCEEEEcCCCEEEEEEc--CCCCCCCcceEEEEEEEcCCCc----e-EEEEeCCcceEEEcCCCCCCEEEEEEE
Confidence 44588899998899999999999 5665445899999998754422 1 223345668899999999999999999
Q ss_pred EEecCCCCCCCCCcEEEeeccc
Q psy12061 573 AFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 573 a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
|+|..|.|++|.+ +.+++...
T Consensus 80 A~n~~G~g~~S~~-v~~~T~~~ 100 (106)
T 1x4x_A 80 ALSVVGAGPFSEV-VACVTPPS 100 (106)
T ss_dssp EECSSCCCCBCCC-EEEECCCC
T ss_pred EEcCCcCCCCcCC-EEEECCCC
Confidence 9999999999965 45666543
No 425
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=7.5e-14 Score=110.79 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=91.0
Q ss_pred CCCCCCccEEEEccCCCCCCCCCceEEE-eeecceEEEEeeeccccccccceeeEEEEEEEEecCCC-ccceEEEEecCc
Q psy12061 373 GPGPESEVVTIFSAEDMPQVAPQGVFSR-GFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP-EETAVYYLSRTT 450 (626)
Q Consensus 373 g~~~~s~~~~~~t~~~~p~~~p~~~~~~-~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~ 450 (626)
|.|.+|..+.+.|..+.|. +|.++.+. ..+.+++.|+|++|...+ +..|.+|.|+|+..... .+.. .....
T Consensus 1 G~s~~S~~~~~~t~~~~P~-~P~~~~~~~~~~~~sv~l~W~~p~~~g---g~~i~~Y~v~~~~~~~~~~~~~---~~~~~ 73 (120)
T 2crm_A 1 GSSGSSGVVEFTTCPDKPG-IPVKPSVKGKIHSHSFKITWDPPKDNG---GATINKYVVEMAEGSNGNKWEM---IYSGA 73 (120)
T ss_dssp CCCTTCSCCSCCSCCCCCC-CCCCCEEEEEEETTEEEEECCCCTTCC---SSCCCEEEEEEEESSSSCCCEE---EECSS
T ss_pred CCCCCcCCEEEEeCCCCCC-CCCCCEEeeccCCCEEEEEECCCCcCC---CCeeeEEEEEEccCCCCcCCEE---EEecc
Confidence 5778888888888888887 77787776 788999999999887542 24689999999876552 2222 22345
Q ss_pred cceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 451 RNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 451 ~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
...+.+.+|+|++.|.|+|+|.|..|.|++|..+.++|....|+
T Consensus 74 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~ 117 (120)
T 2crm_A 74 TREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGP 117 (120)
T ss_dssp CSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCC
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCC
Confidence 66799999999999999999999999999999888888865543
No 426
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.52 E-value=3.3e-13 Score=117.53 Aligned_cols=174 Identities=20% Similarity=0.239 Sum_probs=106.7
Q ss_pred CCceeeeCCCceEEec-CCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEE
Q psy12061 80 GPSYYEQLPPKITIAA-HRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~-g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 158 (626)
+|.+.. +....+.+ |++++|.|.+.+.|.+...+.|+|+|..+.... ....++.|.|.+++.+|+|.|+
T Consensus 3 ~P~i~~--~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~--------~~~~~~~L~i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 3 EPRIVT--SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATR--------KNASNMEYRINKPRAEDSGEYH 72 (190)
T ss_dssp CCEEEE--CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCC--------BCCSEEEEEESSCCGGGCEEEE
T ss_pred CCcccc--cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccc--------eEeccEEEEEecCCcccCEEEE
Confidence 444433 44556666 999999999999887445779999999987542 1125578999999999999999
Q ss_pred EEEEeCCCceEEEEEEEEeCCCCCCCce-EEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEee-cceeeee
Q psy12061 159 CVVKSTVGKISTKTTVIVEGPPGLPGGV-QVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVS-EHVIGKE 236 (626)
Q Consensus 159 C~a~n~~g~~~~~~~l~v~~~P~~p~~~-~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~-~~~~~~~ 236 (626)
|.+.|. |..+..+.|.|..+|...... .........+.|.|... +.+... +.|...++....... ..... .
T Consensus 73 C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~p~--i~W~~~~~g~~~~~~~~~~~~-~ 145 (190)
T 2wv3_A 73 CVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSV---GYPHPE--WMWRKKENGVFEEISNSSGRF-F 145 (190)
T ss_dssp EEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEE---CSSCCE--EEEEEEETTEEEECCCTTSCE-E
T ss_pred EEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeC---ccCCCc--eEEEEcCCCceeeeecCCCeE-E
Confidence 999999 888999999999876421110 11233445566666642 111112 222211000000000 00000 0
Q ss_pred eeccCCceeEEEEeecc-CCceEEEEEEEecCCccC
Q psy12061 237 VDRYTGRKEASIENVLV-PWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 237 ~~~~~~~~~~~i~~~l~-~~~~y~~~v~a~n~~g~~ 271 (626)
.........+.+.+ +. ..+.+.|+|.|.|..|..
T Consensus 146 ~~~~~~~~~L~i~~-~~~~~d~G~Y~C~a~N~~g~~ 180 (190)
T 2wv3_A 146 IINKENYTELNIVN-LQITEDPGEYECNATNSIGSA 180 (190)
T ss_dssp EEECSSEEEEEECS-CCTTTSCEEEEEEEECSSCEE
T ss_pred EecCCCeeEEEEEe-ccccCCCEEEEEEEEecCCcc
Confidence 00001112455555 88 799999999999998854
No 427
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=1.8e-13 Score=106.34 Aligned_cols=102 Identities=25% Similarity=0.334 Sum_probs=83.0
Q ss_pred ccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCce
Q psy12061 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464 (626)
Q Consensus 385 t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 464 (626)
|.+.+|. +|.++++...+.+++.|+|++|... +|.|.+|.|+|+..+....... ........+.|.+|+|++.
T Consensus 3 T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~ 75 (108)
T 2djs_A 3 SGSSGPS-TVPIMHQVSATMRSITLSWPQPEQP----NGIILDYEIRYYEKEHNEFNSS--MARSQTNTARIDGLRPGMV 75 (108)
T ss_dssp SCCCCCC-CCSCCEEEEECSSEEEEECCCCSCC----SSCEEEEEEEEEETTSCSTTCE--EEEESSSEEEEESCCTTCE
T ss_pred cCCCCCC-CCcceEEEecCCCEEEEEECCCCCC----CCeEEEEEEEEEECCCCCccee--EEecCccEEEEcCCCCCCE
Confidence 5567777 8889999999999999999998643 3779999999988765433222 2234556799999999999
Q ss_pred EEEEEEEeeCCCCCCCCccEEEeecCCCC
Q psy12061 465 YYVKVMAYNNAGEGPESERYLERTYRKAP 493 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p 493 (626)
|.|+|+|+|..|.|++|..+.++|.+...
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 104 (108)
T 2djs_A 76 YVVQVRARTVAGYGKFSGKMCFQTLTDSG 104 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCCSSC
T ss_pred EEEEEEEEeCCEECCCCCCEEEEeCCCCc
Confidence 99999999999999999999999987643
No 428
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=1.2e-13 Score=107.34 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=74.6
Q ss_pred CCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCce----eeEEEEEEEeccCCccccceeeecCccceEEecCCCCCc
Q psy12061 490 RKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPI----IGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGK 565 (626)
Q Consensus 490 ~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i----~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~ 565 (626)
+..|+.+|.+|++..++.+++.|+|. +|...++.+ .+|.|.|+..... ...........+.+.|.||+|++
T Consensus 5 ~~~pp~~P~~l~~~~~s~tsi~lsW~--~p~~~~~~~~~~~~~Y~v~y~~~~~~---~~~~~~~~~~~~~~~i~gL~P~T 79 (113)
T 1x5j_A 5 SSGPMMPPVGVQASILSHDTIRITWA--DNSLPKHQKITDSRYYTVRWKTNIPA---NTKYKNANATTLSYLVTGLKPNT 79 (113)
T ss_dssp SCCCCCCCEEEEEEEEETTEEEEEEE--CTTSCSSSCCCSSCEEEEEECBSSSS---SCCCEECCBCSSEEEEESCCTTC
T ss_pred cCCCCCCCcceEEEEecCCEEEEEec--CCCCccccccCcCceEEEEEEECCCC---CeEEEEEecCcCEEEeCCCCCCc
Confidence 34567799999999999999999999 454444444 4999998763221 12223344577899999999999
Q ss_pred eEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 566 RYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 566 ~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
.|.|+|+|+|..|.|++|.++. ++|.+
T Consensus 80 ~Y~f~V~A~~~~G~g~~S~~v~-~~T~~ 106 (113)
T 1x5j_A 80 LYEFSVMVTKGRRSSTWSMTAH-GTTFE 106 (113)
T ss_dssp EECCEEEEECSSCBCCCCCCCC-EECCC
T ss_pred EEEEEEEEecCCccCCCcccEE-eeccC
Confidence 9999999999999999996654 55554
No 429
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.52 E-value=1.9e-12 Score=113.53 Aligned_cols=184 Identities=11% Similarity=0.100 Sum_probs=111.0
Q ss_pred CCceeEeecC-CcCeEEEEEeeCCCCCcccCcceEEEEEEecCCC--ccee------eeeeeecceeeEEEEeCCCccee
Q psy12061 290 APSRIGGGGG-KIGDLSISWEPLPREKQNAPNIYYKIFWRKKNDT--EFQS------ETLKEYGNVGIAVVRIPSEFYYT 360 (626)
Q Consensus 290 ~p~~~~~~~~-~~~~v~l~W~~~~~~~~~~~~~~y~i~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~L~p~~ 360 (626)
.|.++..... ....+.+.|++ ..+...+...|.+.|...+.. .... .............+.+..+...+
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~--g~~~~l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~ 80 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWST--STIQSLAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLS 80 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECC--CC--------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTS
T ss_pred CCEEEEEEECCCCcEEEEEecC--CCcCCcccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhcc
Confidence 4556776655 46899999998 333322222788888765410 0000 00000111234466777777789
Q ss_pred EEEEEEEEecCCCCCCCCccEEEEccCCCCCCCCCceEEEee-ecceEEEEeeeccccccccceeeEEEEEEEEecCC-C
Q psy12061 361 EYEVKVQAINDVGPGPESEVVTIFSAEDMPQVAPQGVFSRGF-NSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDN-P 438 (626)
Q Consensus 361 ~Y~~~v~a~n~~g~~~~s~~~~~~t~~~~p~~~p~~~~~~~~-~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~-~ 438 (626)
.|.|+|.|.|..|.+. |....+.....+.+.||.++.+... ..+.+.|+|++|... .....|.|+|+..+. .
T Consensus 81 ~Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~-----~~~l~yev~y~~~~~~~ 154 (206)
T 3v6o_A 81 GYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFP-----ENNLQFQIRYGLSGKEV 154 (206)
T ss_dssp CEEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-------------CEEEEEEEEESSSSC
T ss_pred cEEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCC-----CCcEEEEEEEEECCCCC
Confidence 9999999999998765 5666666555555569999998765 578999999988643 125799999988763 2
Q ss_pred ccceEEEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCc
Q psy12061 439 EETAVYYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESE 482 (626)
Q Consensus 439 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~ 482 (626)
.+... .........+.+.+|+|++.|.|+|+|.+..|.|.+|+
T Consensus 155 ~w~~~-~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 155 QWKMY-EVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp CCEEE-EECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred ceEEE-ecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 33222 12222234588999999999999999999877776654
No 430
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.52 E-value=8.3e-14 Score=110.48 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=73.2
Q ss_pred ecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCc-eeeEEEEEEEeccCCcccc-ceeeecCccceEEecCCCCCc
Q psy12061 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEP-IIGYKVRVWEVDQDMSRAN-DTIIPVGNTLDADIVDLSPGK 565 (626)
Q Consensus 488 t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~-i~~Y~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~~ 565 (626)
+.+++|. +|.++.+...+.+ +.|+|+ +|...+|. |.+|.|+|+..+...+... ..+......+.+.|.+|+|++
T Consensus 3 s~~~~P~-~P~~~~~~~~~~t-v~l~W~--~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 78 (122)
T 2e3v_A 3 SGSSGPS-SPSIDQVEPYSST-AQVQFD--EPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPET 78 (122)
T ss_dssp ---CCCC-CCEEEEEEECSSC-EEEEEE--CCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTC
T ss_pred CCCcCCc-CCCccEEEecCCc-EEEEEC--CCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCC
Confidence 4566776 4899998888877 999999 66767777 9999999887654322111 111222467889999999999
Q ss_pred eEEEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 566 RYHMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 566 ~Y~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
.|.|+|+|+|..|.|++|.+.. +++.+
T Consensus 79 ~Y~~rV~A~n~~G~g~~S~~~~-~~t~~ 105 (122)
T 2e3v_A 79 TYAVRLAALNGKGLGEISAASE-FKTQP 105 (122)
T ss_dssp EEEEEEEEEETTEECCCCCCEE-EECCC
T ss_pred EEEEEEEEEeCCccCCCccccc-ccccC
Confidence 9999999999999999997654 55544
No 431
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.51 E-value=5.2e-14 Score=106.47 Aligned_cols=77 Identities=23% Similarity=0.382 Sum_probs=67.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEEeCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVLHGP 81 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~p 81 (626)
+.+|++++|.|.+.| .|.|.|+|+|..+..+.++.+ .+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 13 v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 13 VAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVL-IGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp ECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEE-ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC-
T ss_pred ECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEE-eCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeCCc
Confidence 578999999999987 579999999999988777766 46789999999999999999999999988888888886544
No 432
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.51 E-value=7e-14 Score=112.27 Aligned_cols=109 Identities=20% Similarity=0.204 Sum_probs=83.8
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCC--ccceEEEEecCccceEEEeCCccCce
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNP--EETAVYYLSRTTRNWALIVGLQPDTK 464 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~ 464 (626)
.+.|. +|.++++...+.+++.|+|+++.+. ++.|.+|.|+|+..... .+.... ........ .+.+|+|++.
T Consensus 14 ~~~P~-~P~~~~~~~~~~~sv~l~W~p~~~~----~~~i~~Y~v~~~~~~~~~~~w~~~~-~~~~~~~~-~i~~L~p~t~ 86 (127)
T 1uey_A 14 YDVPN-PPFDLELTDQLDKSVQLSWTPGDDN----NSPITKFIIEYEDAMHKPGLWHHQT-EVSGTQTT-AQLNLSPYVN 86 (127)
T ss_dssp CCSCC-CCEEEEEECCSSSCEEEEEECCCCC----SSCEEEEEEEEEBTTTCTTCEEEEE-EEESSCCE-EEECCCTTCE
T ss_pred ecCCc-CCCCcEEEEccCCEEEEEEECCCCC----CCCceEEEEEEEECCCCCCccEEEe-eeCCCceE-EEecCCCCCE
Confidence 34565 8999999989999999999987533 36799999999776532 222222 22223333 5789999999
Q ss_pred EEEEEEEeeCCCCCCCCcc-EEEeecCCCCCCCCceEEE
Q psy12061 465 YYVKVMAYNNAGEGPESER-YLERTYRKAPQKPPSAVHI 502 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s~~-~~~~t~~~~p~~~p~~l~~ 502 (626)
|.|+|+|.|..|.|++|.. ..++|.+..|..+|.++++
T Consensus 87 Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 87 YSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred EEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence 9999999999999999987 4789999999888988754
No 433
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.51 E-value=1e-13 Score=110.60 Aligned_cols=110 Identities=25% Similarity=0.373 Sum_probs=87.4
Q ss_pred cCCCCCCCCccEEEEccCC------CCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceE
Q psy12061 370 NDVGPGPESEVVTIFSAED------MPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAV 443 (626)
Q Consensus 370 n~~g~~~~s~~~~~~t~~~------~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~ 443 (626)
+..|.|++|..+.++|.+. +|. +|.++++...+ +++.|+|++|... +|.|.+|.|+|+. +.. ...
T Consensus 2 t~~G~g~~S~~~~~~T~~~~~~~~~~P~-~P~~l~~~~~~-~sv~l~W~~P~~~----~g~i~~Y~v~y~~-~~~--~~~ 72 (126)
T 1x5i_A 2 SSGSSGPATDWLSAETFESDLDETRVPE-VPSSLHVRPLV-TSIVVSWTPPENQ----NIVVRGYAIGYGI-GSP--HAQ 72 (126)
T ss_dssp CSCCCCCCCCCCCSCCCCTTSBCSSCCC-SCSEEEEEEET-TEEEEEEECCSCT----TBCCCEEEEEECS-SCG--GGE
T ss_pred CCCccCCCCCCEEeECccccCccCCCCC-CCCeeEEEecC-CEEEEEEcCCCCC----CCCEeEEEEEEEc-CCC--Cce
Confidence 4578899999998999887 787 99999999886 9999999998643 3779999999873 221 222
Q ss_pred EEEecCccceEEEeCCccCceEEEEEEEeeCCCCCCCCccEEEeec
Q psy12061 444 YYLSRTTRNWALIVGLQPDTKYYVKVMAYNNAGEGPESERYLERTY 489 (626)
Q Consensus 444 ~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~~~~t~ 489 (626)
..........++|.+|+|++.|.|+|+|+|..|.|+++... +.|.
T Consensus 73 ~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~-~~T~ 117 (126)
T 1x5i_A 73 TIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYES-AVTR 117 (126)
T ss_dssp EEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCCC-EECC
T ss_pred EEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceeeE-Eecc
Confidence 23345566779999999999999999999999999888643 4444
No 434
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.51 E-value=2.9e-14 Score=109.38 Aligned_cols=77 Identities=27% Similarity=0.488 Sum_probs=68.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEcc--CCCcEEEccC---CcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIG--SGGRRKIFEN---GNLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~--~~~~~~~~~~---g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+. ...++.+..+ ++|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 17 ~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 96 (100)
T 3irg_A 17 IDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96 (100)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEE
Confidence 4689999999999999999999999999986 4467777665 4699999999999999999999999988888887
Q ss_pred EE
Q psy12061 77 VL 78 (626)
Q Consensus 77 v~ 78 (626)
|.
T Consensus 97 V~ 98 (100)
T 3irg_A 97 IR 98 (100)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 435
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=116.34 Aligned_cols=157 Identities=11% Similarity=0.131 Sum_probs=107.5
Q ss_pred CCCCceEEEEeeeCCCCCC-eeEEEeC--CEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-KFVWKKD--GNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-~i~W~~~--~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
|.+|+++.|+|.+.. +.| .+.|... +..+..+. ....+.|.+++ +|.+.|.|.+..........+.|.|+
T Consensus 14 V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~g~-----~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy 86 (196)
T 3bn3_B 14 VERGGSLWLNCSTNC-PRPERGGLETSLRRNGTQRGL-----RWLARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTF 86 (196)
T ss_dssp EETTEEEEEEEEECC-SSCSEEEEECSSEEEEEEEET-----TEEEEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEE
T ss_pred EcCCCeEEEEEeCCC-CCCCccEEEEccCCeeEcccc-----CceEEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEe
Confidence 578999999999964 455 6777642 22221110 01138899999 88888999988765567778899999
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccC-CcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeE
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEE-LLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p-~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y 157 (626)
.+|..+...+....+.+|+.++|.|.+.+.. ...++|+|+|+++.+........ ..........+.+......+...|
T Consensus 87 ~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~-~~~~~~~t~~~~~~~~r~D~g~~~ 165 (196)
T 3bn3_B 87 QRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGE-PPRARGAVLTATVLARREDHGANF 165 (196)
T ss_dssp BCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTS-CTTCCCEEEEEEEECCGGGTTCEE
T ss_pred cCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccc-cccccceeEEEEEeeeeccCCCeE
Confidence 9988877666555589999999999999854 44567899999999875432110 000000113455555544445599
Q ss_pred EEEEEeCCC
Q psy12061 158 ECVVKSTVG 166 (626)
Q Consensus 158 ~C~a~n~~g 166 (626)
+|.|.+..+
T Consensus 166 sC~A~l~l~ 174 (196)
T 3bn3_B 166 SCRAELDLR 174 (196)
T ss_dssp EEEEEEECG
T ss_pred EEEEEccCC
Confidence 999998766
No 436
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1.1e-13 Score=107.09 Aligned_cols=96 Identities=22% Similarity=0.378 Sum_probs=76.1
Q ss_pred cCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEE
Q psy12061 489 YRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYH 568 (626)
Q Consensus 489 ~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~ 568 (626)
.+++|. +|.++++...+.+++.|+|+ +|...++.|.+|.|+|+..+.... . ......+.+.|.+|.|++.|.
T Consensus 4 ~~~~P~-~P~~l~~~~~~~~si~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~~---~--~~~~~~~~~~i~~L~p~t~Y~ 75 (106)
T 2ed8_A 4 GSSGPG-PVENLQAVSTSPTSILITWE--PPAYANGPVQGYRLFCTEVSTGKE---Q--NIEVDGLSYKLEGLKKFTEYS 75 (106)
T ss_dssp CCCCCC-CCEEEEEECSSTTEEEEEEE--CCSSCSSCCCEEEEEEEETTTCCE---E--EEEECSSCEEEESCCTTCEEE
T ss_pred CCCCCc-CCceeEEEecCCCEEEEEEC--CCCCCCCCeeEEEEEEEECCCCce---E--EEeCCccEEEECCCCCCCEEE
Confidence 445665 88999999999999999999 566678899999999876554321 1 122346889999999999999
Q ss_pred EEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 569 MRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 569 ~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
|+|+|+|..|.|++|.++ .+++.+
T Consensus 76 ~~V~A~n~~G~g~~S~~~-~~~T~~ 99 (106)
T 2ed8_A 76 LRFLAYNRYGPGVSTDDI-TVVTLS 99 (106)
T ss_dssp EEEEEECSSCEEEECCCE-EEECCC
T ss_pred EEEEEEeCCccCCCcCCE-EEEcCC
Confidence 999999999999999664 455543
No 437
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.51 E-value=3e-13 Score=118.68 Aligned_cols=170 Identities=19% Similarity=0.229 Sum_probs=106.3
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe---cCC--eEEEeecCCCCC
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI---DGG--LLEITNASFADA 154 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~---~~~--~l~i~~~~~~d~ 154 (626)
+|.+ ...|.+..+.+|++++|.|.+.+.|.+ .+.|+|++..+.... .++.. .++ .|.|.+++.+|+
T Consensus 4 ~P~~-~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~------~~~~~~~~~~~~~~L~i~~~~~~d~ 74 (197)
T 2j8h_A 4 APHF-KEELRNLNVRYQSNATLVCKVTGHPKP--IVKWYRQGKEIIADG------LKYRIQEFKGGYHQLIIASVTDDDA 74 (197)
T ss_dssp CCEE-EECCCCEEEETTSCEEEEEEEECSSCC--EEEEEETTEECCCCS------SSEEEEEETTTEEEEEECSCCGGGC
T ss_pred CCEE-EEcCCccEEcCCCEEEEEEEEeecCCC--EEEEEECCEECccCC------CcEEEEEcCCCEEEEEECcCCHHhC
Confidence 3444 446788999999999999999998876 469999999987532 22222 233 899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCC--CCc----eEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEe
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGL--PGG----VQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNV 228 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~--p~~----~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~ 228 (626)
|.|+|.+.|..|..+..+.|.|..+|.. |.. -.........+.|.|.... .+.. .+ .|.+.
T Consensus 75 G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g---~p~p--~i--------~W~~~ 141 (197)
T 2j8h_A 75 TVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG---KPDP--VI--------TWQKG 141 (197)
T ss_dssp SEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEE---ESCC--EE--------EEEES
T ss_pred EEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEe---cCCC--cE--------EEEEC
Confidence 9999999999999888889988765432 111 1122233445566655321 1111 12 23322
Q ss_pred ecceeeee---eeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 229 SEHVIGKE---VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 229 ~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...+.... .........+.+.+.+...+.+.|+|.|.|..|..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 187 (197)
T 2j8h_A 142 QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGID 187 (197)
T ss_dssp SCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEE
T ss_pred CEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcE
Confidence 22111000 00001112333322277889999999999998854
No 438
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.51 E-value=1.3e-13 Score=108.45 Aligned_cols=95 Identities=20% Similarity=0.323 Sum_probs=78.2
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--cC-C--eEEEeecCCCCC
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--DG-G--LLEITNASFADA 154 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~~-~--~l~i~~~~~~d~ 154 (626)
+|.++ ..|.+..+.+|++++|.|.+.+.|.| .+.|++++..+.... .++.. .. + .|.|.+++.+|+
T Consensus 15 ~p~f~-~~p~~~~v~~G~~v~L~C~~~g~p~p--~v~W~k~~~~~~~~~------~~~~~~~~~~~~~~L~I~~v~~~D~ 85 (116)
T 2kkq_A 15 APMFI-YKPQSKKVLEGDSVKLECQISAIPPP--KLFWKRNNEMVQFNT------DRISLYQDNTGRVTLLIKDVNKKDA 85 (116)
T ss_dssp CCCBS-SCCCCEEEETTEEEEEEEEBCCBSCC--EEEEEETTEECCCCB------TTEEEEECTTCEEEEEEEEECGGGC
T ss_pred CCeEE-eCCCcEEEeCCCcEEEEEEEeccCCC--EEEEEECCEECcCCC------CeEEEEeCCCCeEEEEECCCCcccC
Confidence 45554 45788999999999999999999887 569999999887432 23332 22 2 899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
|.|+|.|.|..|..+..+.|.|..+|.++
T Consensus 86 G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 86 GWYTVSAVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCSCCC
T ss_pred EEEEEEEEcCCCeEEEEEEEEEeCCCCCC
Confidence 99999999999999999999999888664
No 439
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=9.5e-14 Score=108.92 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=74.8
Q ss_pred EEEeecC-CCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCC
Q psy12061 484 YLERTYR-KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562 (626)
Q Consensus 484 ~~~~t~~-~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 562 (626)
+...|.+ .+|. +|.++++...+ +++.|+|+ +|.+.+|.|.+|.|+|+... . ...........+.+.|.+|+
T Consensus 8 ~~~~t~e~~~P~-~P~~l~~~~~~-~sv~l~W~--~P~~~ng~i~gY~i~y~~~~-~---~~~~~~~~~~~~~~~l~~L~ 79 (116)
T 2edb_A 8 PENDLDESQVPD-QPSSLHVRPQT-NCIIMSWT--PPLNPNIVVRGYIIGYGVGS-P---YAETVRVDSKQRYYSIERLE 79 (116)
T ss_dssp SSSSCBCSSCCC-CCSCEEEEECS-SCEEEEEC--CCSCTTBCCCEEEEEEEESS-T---TSEEEEEETTCCEEEECSCC
T ss_pred ccccCCCCCCCC-CCCCeEEEECC-CEEEEEEc--CCCCCCCceeEEEEEEEeCC-C---CeEEEEeCCCeeEEEeCCCC
Confidence 4455666 5565 89999999888 99999999 66677899999999987522 1 12334556778999999999
Q ss_pred CCceEEEEEEEEecCCCCCCCC
Q psy12061 563 PGKRYHMRVLAFSNGGDGRMSS 584 (626)
Q Consensus 563 p~~~Y~~~V~a~~~~G~g~~s~ 584 (626)
|++.|.|+|+|+|..|.|+++.
T Consensus 80 p~t~Y~~~V~A~n~~G~g~~~~ 101 (116)
T 2edb_A 80 SSSHYVISLKAFNNAGEGVPLY 101 (116)
T ss_dssp SSSBEEEEEEEEETTEECSCEE
T ss_pred CCCEEEEEEEEEeCCccCCCCc
Confidence 9999999999999999998663
No 440
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.51 E-value=3e-14 Score=109.10 Aligned_cols=76 Identities=25% Similarity=0.415 Sum_probs=65.0
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCc---EEEc-cCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGR---RKIF-ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~---~~~~-~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.+ +.+. .+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 20 v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 20 VPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp ECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 46899999999999999999999999999875433 2333 3447999999999999999999999999888888876
No 441
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=5.3e-14 Score=109.63 Aligned_cols=78 Identities=22% Similarity=0.290 Sum_probs=64.0
Q ss_pred CCCCceEEEEeeeCCC---CCCeeEEEeCCE-Ecc--CCCcEEEcc---------CCcEEEccCCCCCCEEEEEEEEcCC
Q psy12061 2 AGEGGNVTIFCNPEAA---PKPKFVWKKDGN-IIG--SGGRRKIFE---------NGNLLISPVSRDDSGIYSCTATNVH 66 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~---p~p~i~W~~~~~-~i~--~~~~~~~~~---------~g~L~i~~v~~~d~G~Y~C~a~n~~ 66 (626)
|.+|++++|.|.+.|. |.|.|+|+|++. .+. ...++.+.. +.+|+|.++..+|+|.|+|+|.|..
T Consensus 19 V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~ 98 (126)
T 2dav_A 19 VKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKD 98 (126)
T ss_dssp EETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSS
T ss_pred EeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCC
Confidence 5789999999999875 899999999752 111 234554421 3579999999999999999999999
Q ss_pred CCceeeEEEEEEe
Q psy12061 67 GMDESKGRLIVLH 79 (626)
Q Consensus 67 g~~~~~~~l~v~~ 79 (626)
|...+.+.|.|..
T Consensus 99 g~~~~~~~L~V~~ 111 (126)
T 2dav_A 99 KFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEECCEEEEEC
T ss_pred CcEEEEEEEEEEe
Confidence 9999999999988
No 442
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.50 E-value=6.5e-14 Score=122.32 Aligned_cols=162 Identities=13% Similarity=0.094 Sum_probs=94.9
Q ss_pred CceEEecCCcEEEEEE---ecccCCcceeEEEeeCCEEeccccC----------CccCCCeeE----ecCCeEEEeecCC
Q psy12061 89 PKITIAAHRNLQLRCS---AHTEELLDVAYIWTHNGVRIGNMDL----------NELETPNIN----IDGGLLEITNASF 151 (626)
Q Consensus 89 ~~~~v~~g~~~~l~C~---~~~~p~p~~~i~W~~~~~~~~~~~~----------~~~~~~~~~----~~~~~l~i~~~~~ 151 (626)
+++++..|++++|.|. +.+.|.| .+.|+|+|..+..... ......++. .+...|.|.+++.
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~--~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 78 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEI--EVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANI 78 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTS--EEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCc--EEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCH
Confidence 3568899999999996 4556665 5699998753321100 000011111 1335799999999
Q ss_pred CCCEeEEEEEEeCCCceEEEEEEEEeCCCCC-------------CCceEEEEEeccceEEEEecCCCCCCcccEEEEEEe
Q psy12061 152 ADAGEYECVVKSTVGKISTKTTVIVEGPPGL-------------PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIAR 218 (626)
Q Consensus 152 ~d~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~-------------p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~ 218 (626)
+|+|.|+|.|.|..|..+..+.|.|..||.. ...+.|...+.....+.|..... .......
T Consensus 79 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~--~~~~~~~---- 152 (203)
T 4fa8_A 79 SHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEG--VEPAPTA---- 152 (203)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---------------
T ss_pred HHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCe--eecCccc----
Confidence 9999999999999999999999998765532 22344444444445555542110 0000000
Q ss_pred ecCCCCceEeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 219 TNWNSTWFNVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 219 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...... ....+.........+.+.+.+.|+|.|.|..|..
T Consensus 153 ---------~~~r~~----~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a 192 (203)
T 4fa8_A 153 ---------ANGGVM----KEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 192 (203)
T ss_dssp ------------CCE----ECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEE
T ss_pred ---------ccceEE----EeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEE
Confidence 000000 0002222222223388999999999999999965
No 443
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.50 E-value=1.7e-13 Score=108.71 Aligned_cols=109 Identities=22% Similarity=0.282 Sum_probs=78.6
Q ss_pred ccCCCCCCCCCceEEEeeecceEEEEeeecccccccccee-eEEEEEEEEecCCCccceEEE--EecCccceEEEeCCcc
Q psy12061 385 SAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGR-LIGHRIKYWKEDNPEETAVYY--LSRTTRNWALIVGLQP 461 (626)
Q Consensus 385 t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~-i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p 461 (626)
+.+++|. +|.++.+...+.+ +.|+|++|... +|. |.+|.|+|+......+..... ........++|.+|+|
T Consensus 3 s~~~~P~-~P~~~~~~~~~~t-v~l~W~~P~~~----~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 76 (122)
T 2e3v_A 3 SGSSGPS-SPSIDQVEPYSST-AQVQFDEPEAT----GGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKP 76 (122)
T ss_dssp ---CCCC-CCEEEEEEECSSC-EEEEEECCCCC------CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCT
T ss_pred CCCcCCc-CCCccEEEecCCc-EEEEECCCCcC----CCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCC
Confidence 3466787 5899999888877 99999998543 366 999999998877654422211 1224456799999999
Q ss_pred CceEEEEEEEeeCCCCCCCCccEEEeecCCCCCCCCce
Q psy12061 462 DTKYYVKVMAYNNAGEGPESERYLERTYRKAPQKPPSA 499 (626)
Q Consensus 462 ~t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p~~ 499 (626)
++.|.|+|+|+|..|.|++|....++|....++.+|..
T Consensus 77 ~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~P~~ 114 (122)
T 2e3v_A 77 ETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKL 114 (122)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEECCCCCCCC----
T ss_pred CCEEEEEEEEEeCCccCCCcccccccccCCCCCCCCee
Confidence 99999999999999999999998887765545556643
No 444
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=2.2e-13 Score=109.30 Aligned_cols=112 Identities=17% Similarity=0.254 Sum_probs=79.7
Q ss_pred CCCCccEEEeecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCcccccee-eecCccceE
Q psy12061 478 GPESERYLERTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTI-IPVGNTLDA 556 (626)
Q Consensus 478 s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 556 (626)
+..|..+.+... ..| .+|.++.+...+.+++.|+|+ ++.++++.|.+|.|+|+....... .+... ......+.
T Consensus 3 s~~s~~~~~~v~-~~P-~~P~~~~~~~~~~~sv~l~W~--p~~~~~~~i~~Y~v~~~~~~~~~~-~w~~~~~~~~~~~~- 76 (127)
T 1uey_A 3 SGSSGPTPAPVY-DVP-NPPFDLELTDQLDKSVQLSWT--PGDDNNSPITKFIIEYEDAMHKPG-LWHHQTEVSGTQTT- 76 (127)
T ss_dssp CCCCCCCCCCCC-CSC-CCCEEEEEECCSSSCEEEEEE--CCCCCSSCEEEEEEEEEBTTTCTT-CEEEEEEEESSCCE-
T ss_pred CCCcEEEEEEee-cCC-cCCCCcEEEEccCCEEEEEEE--CCCCCCCCceEEEEEEEECCCCCC-ccEEEeeeCCCceE-
Confidence 344444444332 344 589999999889999999999 567788999999999876542211 12222 22334444
Q ss_pred EecCCCCCceEEEEEEEEecCCCCCCCCCcEEEeecccc
Q psy12061 557 DIVDLSPGKRYHMRVLAFSNGGDGRMSSPAITFQMGEEK 595 (626)
Q Consensus 557 ~l~~L~p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~~ 595 (626)
.+.+|.|++.|.|+|+|+|..|.|++|.+...+++....
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~ 115 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASE 115 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCC
Confidence 577999999999999999999999999875556666543
No 445
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.50 E-value=5.3e-14 Score=122.94 Aligned_cols=165 Identities=18% Similarity=0.243 Sum_probs=106.0
Q ss_pred eeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE--ecCCeEEEeecCCCCCEeEEEE
Q psy12061 83 YYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN--IDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 83 ~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
.+..++....+.+|++++|.|.+.+.|.+ .+.|++++..+.... .++. ..+..|.|.+++..|+|.|+|.
T Consensus 9 ~i~~~~~~~~~~~G~~v~l~C~~~~~p~~--~i~W~~~~~~~~~~~------~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (192)
T 2iep_A 9 VITTPLETVDALVEEVATFMCAVESYPQP--EISWTRNKILIKLFD------TRYSIRENGQLLTILSVEDSDDGIYCCT 80 (192)
T ss_dssp EESSCCCEEEEETTSCEEEECCEEEESCC--EEEEEETTEECCTTC------TTEEEEGGGTEEEESSCCGGGCEEEEEE
T ss_pred eeecCccceeeeCCCcEEEEeeCCCCCCC--eEEEEECCEEccccC------ccEEEcCCccEEEEcCCCcccCeEEEEE
Confidence 34456788899999999999999998876 569999999886532 2333 3456799999999999999999
Q ss_pred EEeCCCc-eEEEEEEEEeCCCCC---CCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeee
Q psy12061 161 VKSTVGK-ISTKTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKE 236 (626)
Q Consensus 161 a~n~~g~-~~~~~~l~v~~~P~~---p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~ 236 (626)
+.|..|. .+..+.|.|..+|.. |.... ......+.|.|... ..+.....|.+....+....
T Consensus 81 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~--~~~g~~~~l~C~~~-------------g~p~~~v~W~~~~~~~~~~~ 145 (192)
T 2iep_A 81 ANNGVGGAVESCGALQVKMKPKITRPPINVK--IIEGLKAVLPCTTM-------------GNPKPSVSWIKGDSALRENS 145 (192)
T ss_dssp EECSSSCCEEEEEEEEEEEEEEEEECCCCEE--EETTSCEEECCEEE-------------EESCCEEEEEETTEECCCCS
T ss_pred EEcCCCceeEeEEEEEEEeCCccccCCcceE--EeCCCcEEEEEEEe-------------ccCCceEEEEeCCEEccCCC
Confidence 9999887 466677777765532 22221 22334455555421 11111122333222111110
Q ss_pred eeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 237 VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 237 ~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.........+.+.+ +...+.+.|+|.|.|..|..
T Consensus 146 ~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~ 179 (192)
T 2iep_A 146 RIAVLESGSLRIHN-VQKEDAGQYRCVAKNSLGTA 179 (192)
T ss_dssp SEEECTTSCEEESS-CCGGGCEEEEEEEEETTEEE
T ss_pred cEEEecCCcEEEec-CChhhCEEEEEEEEcCCCcE
Confidence 00111222456655 88899999999999998865
No 446
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=106.19 Aligned_cols=100 Identities=20% Similarity=0.288 Sum_probs=82.1
Q ss_pred cCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceE
Q psy12061 386 AEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465 (626)
Q Consensus 386 ~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 465 (626)
..++|. +|.++++...+.+++.|+|++|... ++.|.+|.|+|+..+...+... ......+.|.+|+|++.|
T Consensus 4 ~~~~P~-~P~~l~~~~~~~~si~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~----~~~~~~~~i~~L~p~t~Y 74 (106)
T 2ed8_A 4 GSSGPG-PVENLQAVSTSPTSILITWEPPAYA----NGPVQGYRLFCTEVSTGKEQNI----EVDGLSYKLEGLKKFTEY 74 (106)
T ss_dssp CCCCCC-CCEEEEEECSSTTEEEEEEECCSSC----SSCCCEEEEEEEETTTCCEEEE----EECSSCEEEESCCTTCEE
T ss_pred CCCCCc-CCceeEEEecCCCEEEEEECCCCCC----CCCeeEEEEEEEECCCCceEEE----eCCccEEEECCCCCCCEE
Confidence 355676 8999999999999999999998643 3679999999987665433221 123566999999999999
Q ss_pred EEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 466 YVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 466 ~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.|+|+|+|..|.|++|..+.++|.++.|+
T Consensus 75 ~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 103 (106)
T 2ed8_A 75 SLRFLAYNRYGPGVSTDDITVVTLSDSGP 103 (106)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred EEEEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence 99999999999999999999999988764
No 447
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=8e-14 Score=108.83 Aligned_cols=96 Identities=20% Similarity=0.344 Sum_probs=78.5
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe--c-CC--eEEEeecCCCCC
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI--D-GG--LLEITNASFADA 154 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~-~~--~l~i~~~~~~d~ 154 (626)
+|.+. ..+....+.+|++++|.|.+.+.|.| .+.|+|++..+.... .++.+ . ++ .|.|.+++.+|+
T Consensus 8 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~g~~~~~~~------~~~~~~~~~~~~~~L~i~~v~~~D~ 78 (110)
T 2dm2_A 8 APFFE-MKLKHYKIFEGMPVTFTCRVAGNPKP--KIYWFKDGKQISPKS------DHYTIQRDLDGTCSLHTTASTLDDD 78 (110)
T ss_dssp CCCBS-SCCCCEEEETTCCEEEEEEBCCSSCC--EEEEECSSCBCCTTC------SSEEEEECTTCEEEEEESSCCTTTC
T ss_pred CCEEE-ecCcCeEEeCCCeEEEEEEEEecCCC--EEEEEECCEECCCCC------CeEEEEECCCcEEEEEECCCChhhC
Confidence 44444 45788999999999999999998876 569999999886532 23322 1 23 699999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCCCC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPG 184 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~ 184 (626)
|.|+|.|.|..|..+..+.|.|..+|.+|.
T Consensus 79 G~Y~C~a~N~~g~~~~~~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 79 GNYTIMAANPQGRISCTGRLMVQAVNSGPS 108 (110)
T ss_dssp SCCEEEEECTTCCEEECCCEEEECCSCCSS
T ss_pred EEEEEEEEECCCeEEEEEEEEEECCCCCCC
Confidence 999999999999999999999999998875
No 448
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=2.2e-14 Score=110.15 Aligned_cols=77 Identities=22% Similarity=0.330 Sum_probs=67.4
Q ss_pred CCCCceEEEEeeeCCCCCC-eeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKP-KFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p-~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.+.|.+ .+.|+|||.+|..+.|+.+..+| +|.|.+++.+|+|.|+|.|.| ....+.|.|
T Consensus 20 v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a~L~V 95 (104)
T 2eny_A 20 VLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG----LTSKASLIV 95 (104)
T ss_dssp EESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT----EEEEECEEE
T ss_pred EcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC----eeEEEEEEE
Confidence 5689999999999998754 89999999999988888887766 699999999999999999844 578899999
Q ss_pred EeCCc
Q psy12061 78 LHGPS 82 (626)
Q Consensus 78 ~~~p~ 82 (626)
..+|.
T Consensus 96 ~~~p~ 100 (104)
T 2eny_A 96 RERSG 100 (104)
T ss_dssp ECCCS
T ss_pred eCCCc
Confidence 87764
No 449
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.49 E-value=3.9e-13 Score=117.99 Aligned_cols=170 Identities=18% Similarity=0.299 Sum_probs=106.4
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC--CeEEEeecCCCCCEeE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--GLLEITNASFADAGEY 157 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~g~Y 157 (626)
+|.+ ...+.+..+.+|++++|.|.+.+.|.+ .+.|+|++..+..... ..+...+ ..|.|.+++.+|+|.|
T Consensus 7 ~P~~-~~~~~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y 78 (197)
T 3lcy_A 7 APGI-RKEMKDVTTKLGEAAQLSCQIVGRPLP--DIKWYRFGKELIQSRK-----YKMSSDGRTHTLTVMTEEQEDEGVY 78 (197)
T ss_dssp EEEE-EECCCCEEEETTSEEEEEEEEEEESCC--EEEEEETTEEECCCSS-----EEEEESSSEEEEEEECCSGGGCEEE
T ss_pred CCcc-cccCCceEEeCCCcEEEEEEEecCCCC--EEEEEECCEECCCCcc-----EEEEeCCCEEEEEEecCCccCCEEE
Confidence 3444 445788999999999999999998876 5699999999865421 1222222 2799999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEeCCCCCCC----ceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeeccee
Q psy12061 158 ECVVKSTVGKISTKTTVIVEGPPGLPG----GVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233 (626)
Q Consensus 158 ~C~a~n~~g~~~~~~~l~v~~~P~~p~----~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~ 233 (626)
+|.+.|..|.....+.|.|..+|.... ...........+.|.|.... .+... + .|.+....+.
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~---~p~p~--v--------~W~~~~~~~~ 145 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIG---RPVPA--M--------TWFHGQKLLQ 145 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEE---ESCCE--E--------EEEETTEECC
T ss_pred EEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEee---eeCCe--e--------EEeECCEECC
Confidence 999999999988888888876553221 12222334455666665321 11111 2 2222111110
Q ss_pred eee---eeccCCceeEEEEeeccC-CceEEEEEEEecCCccC
Q psy12061 234 GKE---VDRYTGRKEASIENVLVP-WSTYEFKVIAGNELGYG 271 (626)
Q Consensus 234 ~~~---~~~~~~~~~~~i~~~l~~-~~~y~~~v~a~n~~g~~ 271 (626)
... .........+.+.+ +.. .+.+.|+|.|.|..|..
T Consensus 146 ~~~~~~~~~~~~~~~L~i~~-~~~~~d~G~Y~C~a~n~~g~~ 186 (197)
T 3lcy_A 146 NSENITIENTEHYTHLVMKN-VQRKTHAGKYKVQLSNVFGTV 186 (197)
T ss_dssp CCSSEEEEECSSEEEEEESS-CCHHHHCEEEEEEEECSSCEE
T ss_pred CCCceEEEEcCCEEEEEEcc-ccchhhCceEEEEEEcCcCce
Confidence 000 00001112344444 664 78999999999998854
No 450
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.49 E-value=2.1e-13 Score=105.79 Aligned_cols=99 Identities=21% Similarity=0.211 Sum_probs=80.7
Q ss_pred CCCCCCCCCceEEEe--eecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCce
Q psy12061 387 EDMPQVAPQGVFSRG--FNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTK 464 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~--~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 464 (626)
..+|. +|.++++.. .+.+++.|+|++|... ++.|.+|.|+|+......+... ......+.+.+|+|++.
T Consensus 5 ~~~P~-~P~~l~~~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~----~~~~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 5 SSGPD-APRNLQLSLPREAEGVIVGHWAPPIHT----HGLIREYIVEYSRSGSKMWASQ----RAASNFTEIKNLLVNTL 75 (108)
T ss_dssp CCCTT-SCEEEEEECCTTCSSCEEEEEECCSCC----SSCEEEEEEEEEETTCSCCEEE----EESSSEEEECSCCSSCE
T ss_pred CCCCc-CCcCeEEEEeccCCCEEEEEEcCCCCC----CCcEEEEEEEEEECCCCCeEEe----cCCccEEEeCCCCCCCE
Confidence 45676 899998776 5788999999998733 3779999999988765443322 22345799999999999
Q ss_pred EEEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 465 YYVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 465 Y~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
|.|+|+|+|..|.|++|..+.++|.++.|+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 105 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIKGSGP 105 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCSCSSC
T ss_pred EEEEEEEECCCceeCCCCCEEEECCCCCCC
Confidence 999999999999999999999999888776
No 451
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.1e-14 Score=110.57 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=63.2
Q ss_pred CCCCceEEEEeeeCCC---CCCeeEEEeCC-EEccC--CCcEEEcc---------CCcEEEccCCCCCCEEEEEEEEcCC
Q psy12061 2 AGEGGNVTIFCNPEAA---PKPKFVWKKDG-NIIGS--GGRRKIFE---------NGNLLISPVSRDDSGIYSCTATNVH 66 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~---p~p~i~W~~~~-~~i~~--~~~~~~~~---------~g~L~i~~v~~~d~G~Y~C~a~n~~ 66 (626)
|.+|++++|.|.+.|. |.|.|+|+|++ ..+.. +.++.+.. +++|.|.+|..+|+|.|+|+|+|..
T Consensus 24 V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~ 103 (118)
T 2edn_A 24 VETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKD 103 (118)
T ss_dssp EETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSS
T ss_pred EeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcC
Confidence 5789999999999875 78999999975 22321 23444421 3579999999999999999999999
Q ss_pred CCceeeEEEEEEe
Q psy12061 67 GMDESKGRLIVLH 79 (626)
Q Consensus 67 g~~~~~~~l~v~~ 79 (626)
|...+.+.|.|..
T Consensus 104 g~~s~~~~L~V~~ 116 (118)
T 2edn_A 104 TCDSCGFNIDVEA 116 (118)
T ss_dssp CEEEEEECCEEEC
T ss_pred CcEEEEEEEEEEc
Confidence 9999999999965
No 452
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.49 E-value=1.3e-13 Score=120.40 Aligned_cols=170 Identities=16% Similarity=0.173 Sum_probs=103.6
Q ss_pred CceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCce
Q psy12061 89 PKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKI 168 (626)
Q Consensus 89 ~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~ 168 (626)
.+..+.+|++++|.|.+.+.|.+ .+.|++++..+.... ...+...+..|.|.+++..|+|.|+|.+.|..|..
T Consensus 12 ~~~~v~~G~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~ 84 (192)
T 2va4_A 12 FNATAERGEEMTFSCRASGSPEP--AISWFRNGKLIEENE-----KYILKGSNTELTVRNIINSDGGPYVCRATNKAGED 84 (192)
T ss_dssp EEEETTSCCCEEEECEEECSSCC--EEEEEETTEECCCSS-----SEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred cEEEEecCCCEEEEEeeccCCCC--eEEEEECCeEcCCCc-----cEEEeCCeeEEEEecCChhcCcEEEEEEEcccccc
Confidence 46788899999999999988876 569999999987542 11222355689999999999999999999999988
Q ss_pred EEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecce--eeeeeeccCCceeE
Q psy12061 169 STKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHV--IGKEVDRYTGRKEA 246 (626)
Q Consensus 169 ~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~ 246 (626)
...+.|.|..+|...............+.|.|.... .+... +.|...+...-....... .............+
T Consensus 85 ~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~---~p~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 159 (192)
T 2va4_A 85 EKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEG---EPIPE--ITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSL 159 (192)
T ss_dssp EEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEE---ESCCE--EEEEETTTTEEECTTCBCTTSCEEEEEETTEEEE
T ss_pred ceEEEEEEEccCcccccCcceEEeCCeEEEEEEecC---CCCCc--EEEEeCCCCceeeccccccCCcEEEeeccCceEE
Confidence 888888887665421111111222445555555311 11111 222221100000000000 00000000122356
Q ss_pred EEEeeccCCceEEEEEEEecCCccC
Q psy12061 247 SIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 247 ~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
.+.+ +...+.+.|+|.|.|..|..
T Consensus 160 ~i~~-~~~~d~G~Y~C~a~n~~g~~ 183 (192)
T 2va4_A 160 HIKD-VKLSDSGRYDCEAASRIGGH 183 (192)
T ss_dssp EEES-CCGGGCEEEEEEEECSSCEE
T ss_pred EEec-CCcccCEEEEEEEEecCCce
Confidence 6665 89999999999999998853
No 453
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.49 E-value=2.4e-13 Score=105.50 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=73.9
Q ss_pred CCCCCCCCceEEEee--eCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceE
Q psy12061 490 RKAPQKPPSAVHIKG--INPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567 (626)
Q Consensus 490 ~~~p~~~p~~l~~~~--~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 567 (626)
+..|. +|.++++.. .+.+++.|+|+ +|.+.++.|.+|.|+|+..+... +... ....+.+.|.+|.|++.|
T Consensus 5 ~~~P~-~P~~l~~~~~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~---~~~~--~~~~~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 5 SSGPD-APRNLQLSLPREAEGVIVGHWA--PPIHTHGLIREYIVEYSRSGSKM---WASQ--RAASNFTEIKNLLVNTLY 76 (108)
T ss_dssp CCCTT-SCEEEEEECCTTCSSCEEEEEE--CCSCCSSCEEEEEEEEEETTCSC---CEEE--EESSSEEEECSCCSSCEE
T ss_pred CCCCc-CCcCeEEEEeccCCCEEEEEEc--CCCCCCCcEEEEEEEEEECCCCC---eEEe--cCCccEEEeCCCCCCCEE
Confidence 44565 889998766 57899999999 56678899999999987765431 1111 335679999999999999
Q ss_pred EEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 568 HMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 568 ~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
.|+|+|+|..|.|++|+++ .+++.
T Consensus 77 ~~~V~A~n~~G~g~~S~~~-~~~T~ 100 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSK-SITTI 100 (108)
T ss_dssp EEEEEEEESSCEEEECCCE-EEECC
T ss_pred EEEEEEECCCceeCCCCCE-EEECC
Confidence 9999999999999999764 45554
No 454
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.1e-13 Score=106.01 Aligned_cols=77 Identities=17% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCC----------cEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCC
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG----------RRKIFENG---NLLISPVSRDDSGIYSCTATNVHGM 68 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~----------~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~ 68 (626)
|.+|++++|.|.+++ .|.+.|+|||.+|..+. |+.+..+| +|.|.+++.+|+|.|+|..- +.
T Consensus 20 v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~---~~ 94 (112)
T 2e6q_A 20 VYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSC---PG 94 (112)
T ss_dssp EETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEE---TT
T ss_pred EcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEE---CC
Confidence 568999999999998 77999999999999877 99998887 69999999999999977333 34
Q ss_pred ceeeEEEEEEeCCce
Q psy12061 69 DESKGRLIVLHGPSY 83 (626)
Q Consensus 69 ~~~~~~l~v~~~p~~ 83 (626)
..++|.|.|..+|..
T Consensus 95 ~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 95 VQDSAALTIQESSGP 109 (112)
T ss_dssp EEEEEEEEEECSSCS
T ss_pred eeEEEEEEEeCCCcc
Confidence 567899999887754
No 455
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.48 E-value=1.6e-13 Score=106.90 Aligned_cols=98 Identities=19% Similarity=0.310 Sum_probs=73.8
Q ss_pred cCCCCCCCCceEEE-eeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceE
Q psy12061 489 YRKAPQKPPSAVHI-KGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRY 567 (626)
Q Consensus 489 ~~~~p~~~p~~l~~-~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y 567 (626)
....| .+|.++.+ ...+.+++.|+|++ +..++++.|.+|.|+|+..+.. .+........+.+.+.+|.|++.|
T Consensus 5 ~~~~P-~~P~~~~~~~~~~~~sv~l~W~~-P~~~~~~~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~~v~~L~p~t~Y 78 (110)
T 2crz_A 5 SSGPP-GPCLPPRLQGRPKAKEIQLRWGP-PLVDGGSPISCYSVEMSPIEKD----EPREVYQGSEVECTVSSLLPGKTY 78 (110)
T ss_dssp CCCCC-CCCCCCEECSCCCSSEEEEECCC-CSCCTTSCCCEEEEEEECTTSC----CCEEEEEESCSEEEEESCCTTCEE
T ss_pred cCCCC-CCCCCceeccccCCCEEEEEeCC-CCCCCCceeEEEEEEEEeCCCC----ceEEEEeCCcEEEEECCcCCCCEE
Confidence 33444 58888888 56788999999983 3345678899999998754433 222333456789999999999999
Q ss_pred EEEEEEEecCCCCCCCCCcEEEeecc
Q psy12061 568 HMRVLAFSNGGDGRMSSPAITFQMGE 593 (626)
Q Consensus 568 ~~~V~a~~~~G~g~~s~~~~~~~~~~ 593 (626)
.|+|+|+|..|.|++|+++. +++..
T Consensus 79 ~frV~A~n~~G~g~~S~~~~-~~T~~ 103 (110)
T 2crz_A 79 SFRLRAANKMGFGPFSEKCD-ITTAP 103 (110)
T ss_dssp EECCEEECSSCBCCCCCCEE-EECCC
T ss_pred EEEEEEEcCCccCCCCCccc-cccCC
Confidence 99999999999999997654 55543
No 456
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.48 E-value=6.9e-14 Score=108.53 Aligned_cols=77 Identities=22% Similarity=0.256 Sum_probs=62.4
Q ss_pred CCCCceEEEEeeeCCCCC---CeeEEEeCCEEc-c--CCCcEEEc---------cCCcEEEccCCCCCCEEEEEEEEcCC
Q psy12061 2 AGEGGNVTIFCNPEAAPK---PKFVWKKDGNII-G--SGGRRKIF---------ENGNLLISPVSRDDSGIYSCTATNVH 66 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~---p~i~W~~~~~~i-~--~~~~~~~~---------~~g~L~i~~v~~~d~G~Y~C~a~n~~ 66 (626)
|.+|++++|.|.+.|.|. |.|.|+|++... . ...++.+. .+++|.|.+++.+|+|.|+|.|.|..
T Consensus 16 v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 95 (108)
T 3cx2_A 16 VTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKD 95 (108)
T ss_dssp EETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCC
Confidence 568999999999999998 999999987322 2 12344432 13479999999999999999999999
Q ss_pred CCceeeEEEEEE
Q psy12061 67 GMDESKGRLIVL 78 (626)
Q Consensus 67 g~~~~~~~l~v~ 78 (626)
|...+.+.|.|.
T Consensus 96 G~~~~~~~L~V~ 107 (108)
T 3cx2_A 96 KFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEEEEE
T ss_pred CceEEEEEEEEe
Confidence 999999999884
No 457
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.48 E-value=4.6e-13 Score=102.23 Aligned_cols=89 Identities=21% Similarity=0.352 Sum_probs=73.5
Q ss_pred CCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEEEEE
Q psy12061 494 QKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMRVLA 573 (626)
Q Consensus 494 ~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~V~a 573 (626)
+.+|.+|++...+.+++.|+|+ +|.+.++.|.+|.|.|+..+.... ........+.+++.|.+|+|++.|.|+|+|
T Consensus 8 ~~~P~~l~v~~~t~~Sv~lsW~--~p~~~~g~i~~Y~v~y~~~~~~~~--~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 8 SSVPTKLEVVDATPTSLKISWD--AYYSSWQNVKYYRITYGETGGDSP--VQEFTVPGYYSTATISGLKPGVDYTITVYA 83 (103)
T ss_dssp CCCCCSCEEEEEETTEEEEECT--TTTTTSCCCCEEEEEEEETTCSSC--CEEEEEETTCCEEEECSCCTTCCEEEEEEE
T ss_pred CCCCceeEEEecCCCEEEEEcc--CCCCCCCccceEEEEEEECCCCCc--cEEEEcCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 4588999999999999999999 566678999999999987643211 233455667899999999999999999999
Q ss_pred Eec--CCCCCCCCCcE
Q psy12061 574 FSN--GGDGRMSSPAI 587 (626)
Q Consensus 574 ~~~--~G~g~~s~~~~ 587 (626)
.|. .|.|+ |+|+.
T Consensus 84 ~~~~~~G~~~-S~p~~ 98 (103)
T 3t04_D 84 YDTFFPGYEP-NSPIS 98 (103)
T ss_dssp ESCCCTTCCC-SCCEE
T ss_pred EeCCCCCCCC-CCCEE
Confidence 999 99998 76653
No 458
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.4e-14 Score=113.28 Aligned_cols=81 Identities=35% Similarity=0.636 Sum_probs=70.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc--cCC--cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF--ENG--NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~--~~g--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|++..+....+..+. .++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 21 v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 100 (110)
T 2dm3_A 21 VQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVV 100 (110)
T ss_dssp EESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEE
T ss_pred EeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEE
Confidence 568999999999999999999999999998766554433 333 7999999999999999999999999888999999
Q ss_pred EeCCc
Q psy12061 78 LHGPS 82 (626)
Q Consensus 78 ~~~p~ 82 (626)
..+|.
T Consensus 101 ~~~p~ 105 (110)
T 2dm3_A 101 AAKES 105 (110)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 77653
No 459
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=6.9e-14 Score=107.58 Aligned_cols=76 Identities=28% Similarity=0.377 Sum_probs=65.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCC--cEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGG--RRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLI 76 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~--~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 76 (626)
+.+|++++|.|.+.+ |.|.|.|+|||..|..+. ++.+..++ +|.|.+++.+|+|.|+|.|.| ....+.|.
T Consensus 19 v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~ 93 (103)
T 1x44_A 19 AYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKLS 93 (103)
T ss_dssp EETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEEEEE
T ss_pred EECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEE
Confidence 568999999999988 779999999999998776 66777653 699999999999999999987 47778898
Q ss_pred EEeCCc
Q psy12061 77 VLHGPS 82 (626)
Q Consensus 77 v~~~p~ 82 (626)
|..+|.
T Consensus 94 V~~~p~ 99 (103)
T 1x44_A 94 VDLKSG 99 (103)
T ss_dssp EECCCS
T ss_pred EeCCCC
Confidence 877653
No 460
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.48 E-value=7e-13 Score=116.77 Aligned_cols=166 Identities=16% Similarity=0.167 Sum_probs=101.1
Q ss_pred eeCCCceEEecCCcEEEEEEecccCC---cceeEEEeeCCEEeccccCCccCCCeeEe-------cCCeEEEeecCCCCC
Q psy12061 85 EQLPPKITIAAHRNLQLRCSAHTEEL---LDVAYIWTHNGVRIGNMDLNELETPNINI-------DGGLLEITNASFADA 154 (626)
Q Consensus 85 ~~~~~~~~v~~g~~~~l~C~~~~~p~---p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~ 154 (626)
..++..+.+.+|++++|.|.+.+.|. ..+.+.|+|++....... .+... ....|.|.+++.+|+
T Consensus 6 ~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~------~r~~~~~~~~~~~~~~L~I~~v~~~D~ 79 (202)
T 3bp6_B 6 TAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQS------ERATLLEEQLPLGKALFHIPSVQVRDS 79 (202)
T ss_dssp ECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBC------SSCEECGGGGGGTEEEEEECSCCGGGC
T ss_pred ecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccC------CceEEeeccccCCeeEEEECCCCHHHC
Confidence 34566789999999999999999874 124679999444332211 22222 236899999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCCCCCceEE-EEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeeccee
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPGLPGGVQV-VEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVI 233 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~-~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~ 233 (626)
|.|+|.+.|..|..+..+.|.|..+|..|.. .+ .......+.|.|... +.+.. .|. |.+......
T Consensus 80 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~---g~P~p--~v~--------W~~~~~~~~ 145 (202)
T 3bp6_B 80 GQYRCLVICGAAWDYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQAR---GYPLA--EVS--------WQNVSVPAN 145 (202)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEE---EBSCC--EEE--------ETTCCSCCE
T ss_pred cEEEEEEEeCCCcceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEcc---ccCCc--eEE--------EEeCCCCcc
Confidence 9999999999998888999999887755422 22 222344555555531 11111 122 222111111
Q ss_pred eeeeeccCCcee-EEEEeeccCCceEEEEEEEecCCccC
Q psy12061 234 GKEVDRYTGRKE-ASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 234 ~~~~~~~~~~~~-~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
........+... ..+.. +...+.+.|+|.|.|..|..
T Consensus 146 ~~~~~~~~~~~~~~~i~~-v~~~d~G~Y~C~a~N~~g~~ 183 (202)
T 3bp6_B 146 TSHIRTPEGLYQVTSVLR-LKPQPSRNFSCMFWNAHMKE 183 (202)
T ss_dssp EEEEECTTSCEEEEEEEE-ECCCTTCCEEEEEEETTTTE
T ss_pred CceeeCCCCCEEEEEEEE-EEcCCCCEEEEEEEcCCccc
Confidence 111111112212 23334 78888999999999998854
No 461
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=103.93 Aligned_cols=91 Identities=27% Similarity=0.421 Sum_probs=75.6
Q ss_pred ceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCee-EecCCeEEEeecCCCCCEeEEEE
Q psy12061 82 SYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNI-NIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 82 ~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
+.+...|....+..|++++|.|.+.+.|.|. +.|+|++..+.... .++ ...++.|.|.+++.+|+|.|+|.
T Consensus 9 P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~------~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 9 PIILQGPANQTLAVDGTALLKCKATGDPLPV--ISWLKEGFTFPGRD------PRATIQEQGTLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp CEEEECCCCEEEESSSEEEECCEEECSSCCE--EEEEESSSEESSSC------SSCEECTTCCEEEESCCTTTCCEEEEE
T ss_pred CEEEeCcCCEEEcCCCcEEEEEEEEEcCCCE--EEEEECCEECCCCC------CCEEEcCCCEEEEccCCcccCEEEEEE
Confidence 3444567888999999999999999998874 69999999887432 222 23567899999999999999999
Q ss_pred EEeCCCceEEEEEEEEeCCC
Q psy12061 161 VKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 161 a~n~~g~~~~~~~l~v~~~P 180 (626)
|.|..|..+..+.|.|..+|
T Consensus 81 a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp EECSSCCCBCCEEEEEESCC
T ss_pred EEcCCCCEEEEEEEEEecCC
Confidence 99999999999999998764
No 462
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.48 E-value=2.8e-13 Score=104.44 Aligned_cols=99 Identities=20% Similarity=0.160 Sum_probs=79.0
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEE
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
...|. +|.++++...+.+++.|+|++|...+ +.|.+|.|+|+..... .. . ........+.+.+|+|++.|.
T Consensus 5 ~~~P~-~P~~~~~~~~s~~sv~l~W~~p~~~g----~~i~~Y~v~~~~~~~~-~~-~--~~~~~~~~~~v~~L~p~t~Y~ 75 (106)
T 1x4x_A 5 SSGPD-QCKPPQVTCRSATCAQVNWEVPLSNG----TDVTEYRLEWGGVEGS-MQ-I--CYCGPGLSYEIKGLSPATTYY 75 (106)
T ss_dssp CCSCC-CCCCCCCEEEETTEEEEECCCCSCSS----SCCCEEEEEEESSTTS-CC-E--EEEESCSEEEEESCCSSCEEE
T ss_pred CCCcC-CCCCCEEEEcCCCEEEEEEcCCCCCC----CcceEEEEEEEcCCCc-eE-E--EEeCCcceEEEcCCCCCCEEE
Confidence 44444 88899999999999999999887522 3699999999765432 21 1 122344669999999999999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
|+|+|.|..|.|++|..+.++|.+..|.
T Consensus 76 frV~A~n~~G~g~~S~~v~~~T~~~~P~ 103 (106)
T 1x4x_A 76 CRVQALSVVGAGPFSEVVACVTPPSSGP 103 (106)
T ss_dssp EEEEEECSSCCCCBCCCEEEECCCCCSC
T ss_pred EEEEEEcCCcCCCCcCCEEEECCCCCcC
Confidence 9999999999999999999999987775
No 463
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=109.14 Aligned_cols=111 Identities=17% Similarity=0.229 Sum_probs=85.1
Q ss_pred CCCCCccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccce
Q psy12061 374 PGPESEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNW 453 (626)
Q Consensus 374 ~~~~s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 453 (626)
.+..+....++|.+++|. +|.++++...+.+++.|+|++|... |.|.+|.|+|+..+...+. ...........
T Consensus 2 ss~~~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~-----g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~ 74 (118)
T 2yrz_A 2 SSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEPRCE-----RPLQGYSVEYQLLNGGELH-RLNIPNPAQTS 74 (118)
T ss_dssp CCCCCSCCTTSSSCSCCC-CCCCCEECCCBTTEEEEECCCCCCS-----SCEEEEEEEEEBSSSCCEE-EEEESCTTCCE
T ss_pred CCCCCCcceeecCCCCCC-CCCceEEEeCCCCEEEEEeCCCCCC-----CCccEEEEEEEECCCCceE-EEEcCCCCcCE
Confidence 334455556678888887 8889999999999999999998753 5799999999876654332 22233345677
Q ss_pred EEEeCCccCceEEEEEEEeeCCCCCCCCc-cEEEeecCC
Q psy12061 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESE-RYLERTYRK 491 (626)
Q Consensus 454 ~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~-~~~~~t~~~ 491 (626)
+.+.+|+|++.|.|+|+|.|..|.|++|. .+.+.|.+.
T Consensus 75 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~~ 113 (118)
T 2yrz_A 75 VVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVS 113 (118)
T ss_dssp EEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCCC
Confidence 99999999999999999999999999887 445555443
No 464
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.48 E-value=8.6e-14 Score=108.34 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=68.4
Q ss_pred EEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCC
Q psy12061 74 RLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFAD 153 (626)
Q Consensus 74 ~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 153 (626)
.|.+..+|.+.. .+.+..+..|++++|.|.+.+.|.|. +.|+|++..+.... .......++.|.|.+++.+|
T Consensus 4 ~v~~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~--i~W~~~~~~~~~~~-----~~~~~~~~~~L~i~~v~~~D 75 (108)
T 3kvq_A 4 TVLERVAPTITG-NLENQTTSIGESIEVSCTASGNPPPQ--IMWFKDNETLVEDS-----GIVLKDGNRNLTIRRVRKED 75 (108)
T ss_dssp -------CCCBS-CCCCEEEETTCCEEEECBCC----CC--EEEEESSSBCCCBT-----TEEEETTTTEEEECSCCGGG
T ss_pred eECccCCCceec-CCCCeEEeCCCeEEEEEECcCcCCCe--EEEEECCeEcccCC-----CeEEeCCCcEEEEeecCccc
Confidence 455555666655 57889999999999999999988874 58999998886532 12223356799999999999
Q ss_pred CEeEEEEEEeCCCceEEEEEEEEeCCCCCC
Q psy12061 154 AGEYECVVKSTVGKISTKTTVIVEGPPGLP 183 (626)
Q Consensus 154 ~g~Y~C~a~n~~g~~~~~~~l~v~~~P~~p 183 (626)
+|.|+|.|.|..|..+..+.|.|..+|..|
T Consensus 76 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 76 EGLYTCQACSVLGCAKVEAFFIIEGAQEKT 105 (108)
T ss_dssp CEEEEEEEC----CEEEEEEEEEEC-----
T ss_pred CEEEEEEEEeCCCceEEEEEEEEeCCCccc
Confidence 999999999999999999999999888655
No 465
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=107.39 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=76.4
Q ss_pred eCCceeee--CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecC--CeEEEeecCCCCC
Q psy12061 79 HGPSYYEQ--LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--GLLEITNASFADA 154 (626)
Q Consensus 79 ~~p~~~~~--~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~ 154 (626)
.+|.+... ++..+.+.+|++++|.|.+.+.|.|. +.|+|+|..+.... ..+.... ..|.|.+++.+|+
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~--i~W~k~g~~l~~~~------~~~~~~~~~~~L~i~~~~~~D~ 91 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQ--VVWTKGGAPLDTSR------VHVRTSDFDTVFFVRQAARSDS 91 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCE--EEEEETTEECCCSS------CEEEECSSEEEEEESSCCTTTC
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCE--EEEEECCEECCCCc------EEEEECCCeEEEEECCCChhcC
Confidence 35555322 45788999999999999999999874 58999999986322 2233333 4599999999999
Q ss_pred EeEEEEEEeCCCceEEEEEEEEeCCCC
Q psy12061 155 GEYECVVKSTVGKISTKTTVIVEGPPG 181 (626)
Q Consensus 155 g~Y~C~a~n~~g~~~~~~~l~v~~~P~ 181 (626)
|.|+|.|.|..|..+..+.|.|..+|+
T Consensus 92 G~Y~C~a~N~~G~~~~~~~l~V~~~P~ 118 (118)
T 2e7c_A 92 GEYELSVQIENMKDTATIRIRVVEKAG 118 (118)
T ss_dssp EEEEEEEECSSCEECCEEEEEEECCCC
T ss_pred EEEEEEEEeCCCeEEEEEEEEEEcCCC
Confidence 999999999999999999999998774
No 466
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=4.7e-14 Score=110.92 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=70.7
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc-cCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-ENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~-~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.|.|+|||..|..+.++.+. .++ +|.|.+++.+|+|.|+|.+ |.....+.|.|
T Consensus 25 v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V 100 (115)
T 2cr6_A 25 VQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRV 100 (115)
T ss_dssp EETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEE
T ss_pred EeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEE
Confidence 568999999999999999999999999999888777765 223 6999999999999999994 67788899999
Q ss_pred EeCCceeeeC
Q psy12061 78 LHGPSYYEQL 87 (626)
Q Consensus 78 ~~~p~~~~~~ 87 (626)
..+|.++..+
T Consensus 101 ~~~p~~~~~~ 110 (115)
T 2cr6_A 101 TEKPSVFSRS 110 (115)
T ss_dssp ECCSSCCSSS
T ss_pred ECCCceeccC
Confidence 9888776543
No 467
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.47 E-value=4e-13 Score=103.41 Aligned_cols=96 Identities=16% Similarity=0.287 Sum_probs=73.8
Q ss_pred eecCCCCCCCCceEEEeeeCCCEEEEEE--eecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCC
Q psy12061 487 RTYRKAPQKPPSAVHIKGINPTTVHVTW--RYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPG 564 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~~~~~~~l~W--~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~ 564 (626)
.|.+.+|. +|.+|++...+.+++.|+| . +|...+|. .+|.|+|+.. .. ....... ...+.|.+|+|+
T Consensus 4 ~T~~~~P~-~p~~l~~~~~~~~sv~l~W~~~--~P~~~ng~-~~Y~v~y~~~-~~----~~~~~~~--~~~~~i~~L~p~ 72 (107)
T 1x5a_A 4 GSSGAESL-SGLSLKLVKKEPRQLELTWAGS--RPRNPGGN-LSYELHVLNQ-DE----EWHQMVL--EPRVLLTKLQPD 72 (107)
T ss_dssp TTTTCCCC-CSCCCCEEEEETTEEEEECCCC--CSSCCSSC-CEEEEEEECS-SC----EEEEEES--SSEEEEESCCSS
T ss_pred cCCCCCCC-CCCceEEEecCCCEEEEEECCC--CCCCCCCc-eEEEEEEEeC-CC----CceEEEe--cceEEECCCCCC
Confidence 46666776 6679999999999999999 7 67778888 9999998765 11 1111111 123999999999
Q ss_pred ceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 565 KRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 565 ~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
+.|.|+|+|+|.+|.|++|.++ .+++.+.
T Consensus 73 t~Y~f~V~A~~~~G~g~~S~~~-~~~T~~~ 101 (107)
T 1x5a_A 73 TTYIVRVRTLTPLGPGPFSPDH-EFRTSPP 101 (107)
T ss_dssp CEEEEEEEEECSSSCCCCCCCE-EEECCCC
T ss_pred CEEEEEEEEECCCccCCCCCCE-EEEECCC
Confidence 9999999999999999999764 4666653
No 468
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=7.7e-14 Score=110.41 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=68.5
Q ss_pred CceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEc-------cCCcEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 5 GGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIF-------ENGNLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 5 G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~-------~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
.+...|.|.+.|.|.|.|.|+|||..+..+.+..+. .+++|.|.+++.+|+|.|+|.|.|..|...+.+.|.|
T Consensus 20 ~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 20 RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp CCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 356789999999999999999999999877665553 3457999999999999999999999999999999988
Q ss_pred EeCCce
Q psy12061 78 LHGPSY 83 (626)
Q Consensus 78 ~~~p~~ 83 (626)
...|..
T Consensus 100 ~~~P~~ 105 (118)
T 1wwc_A 100 LKEPFP 105 (118)
T ss_dssp SCCCCC
T ss_pred ccCCCc
Confidence 776644
No 469
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=9e-14 Score=107.25 Aligned_cols=76 Identities=20% Similarity=0.327 Sum_probs=66.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.| |.|+|+|..+..+.++.+..++ .|.|.+++.+|+|.|+|.|.|. ...+.|.|.
T Consensus 22 v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~~~l~V~ 96 (104)
T 2e6p_A 22 FTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV----SAFFGVTVQ 96 (104)
T ss_dssp EESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSC----CCCEEEEEE
T ss_pred EeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCc----eEEEEEEEc
Confidence 4689999999999999999 9999999999887788777655 5999999999999999999987 347888887
Q ss_pred eCCc
Q psy12061 79 HGPS 82 (626)
Q Consensus 79 ~~p~ 82 (626)
.+|.
T Consensus 97 ~~P~ 100 (104)
T 2e6p_A 97 DPSG 100 (104)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7663
No 470
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=7.9e-13 Score=102.39 Aligned_cols=102 Identities=22% Similarity=0.307 Sum_probs=82.2
Q ss_pred CCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceEE
Q psy12061 387 EDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKYY 466 (626)
Q Consensus 387 ~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 466 (626)
...|. +|.++++...+.+++.|+|+++. ++.+.+|.|+|+.......... ........+.+.+|+|++.|.
T Consensus 5 ~~~P~-~P~~~~~~~~~~~sv~l~W~~~~------~~~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~ 75 (106)
T 2dju_A 5 SSGPK-PPIDLVVTETTATSVTLTWDSGN------SEPVTYYGIQYRAAGTEGPFQE--VDGVATTRYSIGGLSPFSEYA 75 (106)
T ss_dssp CCSCC-CCEEEEEEEEETTEEEEEEECCC------SSCCSEEEEEEEETTCCSCCCC--BCCCCSSEEEEESCCTTCEEE
T ss_pred CcCCc-CCCCcEEEeccCCEEEEEEcCCC------CCCceEEEEEEEECCCCCCeEE--ccCCCccEEEEeCCCCCcEEE
Confidence 44564 89999999999999999999873 2568999999977665422211 223345679999999999999
Q ss_pred EEEEEeeCCCCCCCCccEEEeecCCCCCCCC
Q psy12061 467 VKVMAYNNAGEGPESERYLERTYRKAPQKPP 497 (626)
Q Consensus 467 v~V~a~~~~g~s~~s~~~~~~t~~~~p~~~p 497 (626)
|+|+|.|..|.|++|..+.++|.+..|..||
T Consensus 76 ~~V~A~n~~G~~~~S~~~~~~T~~~~P~~Pp 106 (106)
T 2dju_A 76 FRVLAVNSIGRGPPSEAVRARTGEQSGPSSG 106 (106)
T ss_dssp EEEEEECSSCBCCCCCCEEEECCCSSCCCCC
T ss_pred EEEEEEeCCccCCCcccEEeEcCCCCCCCCC
Confidence 9999999999999999999999998887665
No 471
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1e-13 Score=107.59 Aligned_cols=98 Identities=19% Similarity=0.307 Sum_probs=72.0
Q ss_pred CCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCceEEEE
Q psy12061 491 KAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKRYHMR 570 (626)
Q Consensus 491 ~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~Y~~~ 570 (626)
.+|+.|+.++.....+.+++.|+|+ ++.+.++.|.+|.|+|+..+... + ........+.+.+.+|.|++.|.|+
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~--~p~~~~~~i~~Y~v~~~~~~~~~---~-~~~~~~~~~~~~v~~L~p~t~Y~fr 81 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWK--QPPLSTVPADGYILELDDGNGGQ---F-REVYVGKETMCTVDGLHFNSTYNAR 81 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCB--CCTTCCSCCSEEEEEECCSSSSC---C-EEEEEESCSCEEEECCCSSSCCEEE
T ss_pred CCCCCccccceeeccCCCEEEEEEC--CCCCCCCCccEEEEEEEeCCCCc---e-EEEEeCCcCEEEECCCCCCCEEEEE
Confidence 3455444444444457899999999 66666789999999987644321 2 2223346788999999999999999
Q ss_pred EEEEecCCCCCCCCCcEEEeecccc
Q psy12061 571 VLAFSNGGDGRMSSPAITFQMGEEK 595 (626)
Q Consensus 571 V~a~~~~G~g~~s~~~~~~~~~~~~ 595 (626)
|+|+|..|.|++|++ +.+++.+.+
T Consensus 82 V~A~n~~G~s~~S~~-~~~~T~~~p 105 (110)
T 2db8_A 82 VKAFNKTGVSPYSKT-LVLQTSEGS 105 (110)
T ss_dssp EEEECSSCBCCCCSC-EECCCCCCC
T ss_pred EEEEeCCcCCCCCCC-EEEEcCCCC
Confidence 999999999999965 456666543
No 472
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=5.5e-14 Score=108.23 Aligned_cols=76 Identities=25% Similarity=0.410 Sum_probs=67.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.+ |.+.|.|+|+|..+..+.++.+..++ .|.|.+++.+|+|.|+|.|.| ....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~ 94 (103)
T 2edf_A 20 VAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SKSTASLHVE 94 (103)
T ss_dssp ECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS----CEEEEEEEEC
T ss_pred EcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc----CCcEEEEEEe
Confidence 578999999999998 88899999999999888888888777 499999999999999999998 3677888887
Q ss_pred eCCc
Q psy12061 79 HGPS 82 (626)
Q Consensus 79 ~~p~ 82 (626)
.+|.
T Consensus 95 ~~p~ 98 (103)
T 2edf_A 95 EKAS 98 (103)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 7664
No 473
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.47 E-value=1.2e-13 Score=105.59 Aligned_cols=75 Identities=28% Similarity=0.449 Sum_probs=66.6
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+. .|.|.|.|+|||..|..+.++.+..++ +|.|.+++.+|+|.|+|.| |.....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V~ 94 (100)
T 2yuv_A 20 VDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFVR 94 (100)
T ss_dssp ECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEEC
T ss_pred EcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEEe
Confidence 45899999999998 799999999999999888888887666 4999999999999999999 677788899997
Q ss_pred eCC
Q psy12061 79 HGP 81 (626)
Q Consensus 79 ~~p 81 (626)
.+|
T Consensus 95 ~~P 97 (100)
T 2yuv_A 95 SGP 97 (100)
T ss_dssp CSC
T ss_pred cCC
Confidence 765
No 474
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=107.31 Aligned_cols=80 Identities=21% Similarity=0.317 Sum_probs=69.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+. .|.+.+.|+|||..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.| ....+.|.|.
T Consensus 25 ~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~ 99 (113)
T 2cpc_A 25 AVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVT 99 (113)
T ss_dssp EETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEEEE
T ss_pred EEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEEEe
Confidence 35799999999995 788999999999999888888887665 699999999999999999988 4678899998
Q ss_pred eCCceeee
Q psy12061 79 HGPSYYEQ 86 (626)
Q Consensus 79 ~~p~~~~~ 86 (626)
.+|..+..
T Consensus 100 ~~p~~~~~ 107 (113)
T 2cpc_A 100 EPPVRIIY 107 (113)
T ss_dssp CCCCCCCC
T ss_pred cCCchhcc
Confidence 88866543
No 475
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.47 E-value=6.5e-13 Score=118.33 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=102.2
Q ss_pred CCCCceEEEEeeeCCCC--CCeeEEEeC--CE---Ecc---------CCCcEEEccC---C--cEEEccCCCCCCEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAP--KPKFVWKKD--GN---IIG---------SGGRRKIFEN---G--NLLISPVSRDDSGIYSC 60 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p--~p~i~W~~~--~~---~i~---------~~~~~~~~~~---g--~L~i~~v~~~d~G~Y~C 60 (626)
+.+|++++|.|.+.|.+ .+.+.|+|. |. .|. ..+|+.+..+ + +|.|.+++.+|+|.|.|
T Consensus 13 v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C 92 (229)
T 1hxm_A 13 VSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYYC 92 (229)
T ss_dssp EETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEEE
T ss_pred EcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEEE
Confidence 56899999999998754 468999984 22 221 1467777632 2 69999999999999999
Q ss_pred EEEcCCC------C--ceeeEEEEEEeCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCcc
Q psy12061 61 TATNVHG------M--DESKGRLIVLHGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNEL 132 (626)
Q Consensus 61 ~a~n~~g------~--~~~~~~l~v~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~ 132 (626)
.+.+..+ . ....+.|.|....... .+| .+.+.. ..++|.|.+.+-.++.+.+.|+++ ..+....
T Consensus 93 ~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~-~~P-~v~~~~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~~~---- 164 (229)
T 1hxm_A 93 ACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPH-TKP-SVFVMK-NGTNVACLVKEFYPKDIRINLVSS-KKITEFD---- 164 (229)
T ss_dssp EEECCCCSSSCCCCCEEBCCEEEEEECCSCCC-BCC-EEEEEE-ETTEEEEEEESCBSSCCEEEEECS-SEEEECC----
T ss_pred EEecCCCcccccchhhcCccEEEEEeccCCCC-cCC-cEEEcC-CCCeEEEEEEEEeCCCEEEEEecC-CEEecCc----
Confidence 9998632 1 1234678886422111 122 222222 235999999986555578899999 7665321
Q ss_pred CCCeeE-ecCCeEEEeecCC-CCCEeEEEEEEeCCC
Q psy12061 133 ETPNIN-IDGGLLEITNASF-ADAGEYECVVKSTVG 166 (626)
Q Consensus 133 ~~~~~~-~~~~~l~i~~~~~-~d~g~Y~C~a~n~~g 166 (626)
.... ..++.+.+..... .|.|.|+|.+.+..+
T Consensus 165 --~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 165 --PAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp --CEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred --cceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 1111 2445666655443 678999999999864
No 476
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=2.4e-13 Score=105.42 Aligned_cols=97 Identities=19% Similarity=0.297 Sum_probs=75.9
Q ss_pred eecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCCCceeeEEEEEEEeccCCccccceeeecCccceEEecCCCCCce
Q psy12061 487 RTYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEEEPIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLSPGKR 566 (626)
Q Consensus 487 ~t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~~~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~~~ 566 (626)
+|.+++|.. |. +.+...+.+++.|+|+ +|.+.++.|.+|.|+|+..+... ..........+++.|.+|.|++.
T Consensus 2 ~T~~~~P~~-p~-~~v~~~~~~sv~l~W~--~p~~~~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~ 74 (107)
T 2dn7_A 2 SSGSSGPGR-PT-MMISTTAMNTALLQWH--PPKELPGELLGYRLQYCRADEAR---PNTIDFGKDDQHFTVTGLHKGTT 74 (107)
T ss_dssp TTCCCCCCC-CE-EEEEECSTTEEEEEEE--CCSSCSSCCCEEEEEEEETTCSS---CEEEEEETTCCEEEEECCCTTCE
T ss_pred CCCCCCCCC-Cc-EeEEecCCCEEEEEEC--CCCCCCCceeEEEEEEEECCCCC---CEEEEeCCCccEEEeCCCCCCCE
Confidence 356677764 44 6666679999999999 56678899999999988655431 23345567788999999999999
Q ss_pred EEEEEEEEecCCCCCCCCCcEEEeec
Q psy12061 567 YHMRVLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 567 Y~~~V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
|.|+|+|+|..|.|++|. ..+.+.
T Consensus 75 Y~~~V~A~n~~G~g~~s~--~~~~T~ 98 (107)
T 2dn7_A 75 YIFRLAAKNRAGLGEEFE--KEIRTP 98 (107)
T ss_dssp EEEEEEEEETTEEEEEEE--EEEECC
T ss_pred EEEEEEEEcCCcccCCee--eEEeCC
Confidence 999999999999999886 335544
No 477
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.46 E-value=1.8e-13 Score=107.38 Aligned_cols=77 Identities=26% Similarity=0.450 Sum_probs=68.3
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.+. |.|.|+||+..|..+.|+.+..++ +|.|.+++.+|+|.|+|.| |.....+.|.|.
T Consensus 31 v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 31 ATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp ECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEEC
T ss_pred EeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEEe
Confidence 5789999999999875 789999999999888899998887 7999999999999999999 677888999997
Q ss_pred eCCcee
Q psy12061 79 HGPSYY 84 (626)
Q Consensus 79 ~~p~~~ 84 (626)
.+|..+
T Consensus 105 ~~p~~~ 110 (113)
T 2edh_A 105 AMPSGP 110 (113)
T ss_dssp CCCCSS
T ss_pred CCCCCc
Confidence 776543
No 478
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=1.5e-12 Score=115.78 Aligned_cols=174 Identities=11% Similarity=0.138 Sum_probs=112.1
Q ss_pred eeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccc-----cCCccCCCeeEecCCeEEEeecCCCCCEeEE
Q psy12061 84 YEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNM-----DLNELETPNINIDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 84 ~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 158 (626)
+..++.++.+.+|++++|.|.+.+.|.+ .+.|++++..+... .+......++......|.|.+++.+|+|.|+
T Consensus 4 v~~~~~~~~v~~G~~v~L~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~ 81 (212)
T 1f97_A 4 VYTAQSDVQVPENESIKLTCTYSGFSSP--RVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYT 81 (212)
T ss_dssp EECSCSEEEEETTCCEEEECEEESCSSE--EEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEE
T ss_pred EEecCCCeEEEcCCCEEEEeEeCCCCCc--EEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEE
Confidence 4456788999999999999999988765 56999987663210 0011123566667799999999999999999
Q ss_pred EEEEeCCC--ceEEEEEEEEeCCCCCCCceE-EEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeee
Q psy12061 159 CVVKSTVG--KISTKTTVIVEGPPGLPGGVQ-VVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGK 235 (626)
Q Consensus 159 C~a~n~~g--~~~~~~~l~v~~~P~~p~~~~-~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~ 235 (626)
|.+.|..| ..+..+.|.|..+|..+.... ........+.|.|........+ .+.|...+.. .+...
T Consensus 82 C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~----~i~W~~~~~~-------~l~~~ 150 (212)
T 1f97_A 82 CMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPS----EYSWFKDGIS-------MLTAD 150 (212)
T ss_dssp EEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCC----EEEEEETTEE-------SBC--
T ss_pred EEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCC----EEEEEeCCcc-------ccccc
Confidence 99999977 557788899988887653211 1223456677888732121111 2232222210 11100
Q ss_pred e----------eeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 236 E----------VDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 236 ~----------~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
. .........+.+.+ +...+.+.|+|.|.|..|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 151 AKKTRAFMNSSFTIDPKSGDLIFDP-VTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp ---CBSCSSSCEEECTTTCCEEESS-CCGGGCEEEEEEEECSSSCC
T ss_pred ccccccccCceeEecCCCceEEEEe-cChhhCcEEEEEEccccCCc
Confidence 0 00001233456655 99999999999999999865
No 479
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=1.6e-13 Score=109.32 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=83.0
Q ss_pred CccEEEEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEec---CCCccceEEEE-ecCccce
Q psy12061 378 SEVVTIFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKE---DNPEETAVYYL-SRTTRNW 453 (626)
Q Consensus 378 s~~~~~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~---~~~~~~~~~~~-~~~~~~~ 453 (626)
+..+...+..+.|. +|.++++...+.+++.|+|.++.+.+ +.|.+|.|+|+.. ....+...... .......
T Consensus 6 s~~~~~~~~~~~P~-~P~~l~~~~~~~~sv~l~W~p~~~~~----~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~ 80 (124)
T 1wis_A 6 SGTISSGVPPELPG-PPTNLGISNIGPRSVTLQFRPGYDGK----TSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARS 80 (124)
T ss_dssp SCCCCSCCCCCCCC-CCEEEEEESCCSSCEEEEEECCCCCS----SCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSE
T ss_pred cccccccCCCCCCc-cCCCCEEEEecCCEEEEEEECCCCCC----CcccEEEEEEEECCCCCCCCCeEeeeEccCCCceE
Confidence 33344445556665 89999999999999999998876433 6699999999763 22333222211 2355677
Q ss_pred EEEeCCccCceEEEEEEEeeCCCCCCCCccE-EEeecCCCCC
Q psy12061 454 ALIVGLQPDTKYYVKVMAYNNAGEGPESERY-LERTYRKAPQ 494 (626)
Q Consensus 454 ~~i~~L~p~t~Y~v~V~a~~~~g~s~~s~~~-~~~t~~~~p~ 494 (626)
+++.+|+|++.|.|+|+|.|..|.|++|... .++|.+..|.
T Consensus 81 ~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~ 122 (124)
T 1wis_A 81 MEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPS 122 (124)
T ss_dssp EEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCC
T ss_pred EEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCCCC
Confidence 9999999999999999999999999998754 6788876664
No 480
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.46 E-value=1.2e-13 Score=107.33 Aligned_cols=83 Identities=28% Similarity=0.494 Sum_probs=70.2
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCc---EEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~---L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.+. |.|.|+|++..+..+.++.+..++. |.|.+++.+|+|.|+|.|.| ....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~ 93 (108)
T 2dm7_A 20 ASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ----ERTSATLTVR 93 (108)
T ss_dssp EETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT----EEEEEECEEE
T ss_pred EeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC----CEEEEEEEEe
Confidence 5689999999999876 6899999999998888988887776 99999999999999999944 5777899998
Q ss_pred eCCceeeeCCCc
Q psy12061 79 HGPSYYEQLPPK 90 (626)
Q Consensus 79 ~~p~~~~~~~~~ 90 (626)
.+|..+..++++
T Consensus 94 ~~p~~~~~~~~~ 105 (108)
T 2dm7_A 94 ALPARFTEGSGP 105 (108)
T ss_dssp CCCSSCCCCCCC
T ss_pred cCCHHHccCccc
Confidence 877665554443
No 481
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.46 E-value=1.6e-13 Score=120.57 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=97.8
Q ss_pred CCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCC
Q psy12061 87 LPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECVVKSTVG 166 (626)
Q Consensus 87 ~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g 166 (626)
.|....+.+|++++|.|.+.+.|.+. .+.|+|||..+... .+.|.|.+++.+|+|.|+|.+.|.
T Consensus 13 ~p~~~~v~~G~~v~L~C~~~~~p~~~-~v~W~k~g~~l~~~-------------~~~L~i~~v~~~D~G~Y~C~a~n~-- 76 (204)
T 3sgj_C 13 EPQWYRVLEKDSVTLKCQGAYSPEDQ-STQWFHNESLISSQ-------------ASSYFIDAATVDDSGEYRCQTQLS-- 76 (204)
T ss_dssp ESCCSEEETTCCEEEEEECCSSSSCC-CEEEEETTEEESCC-------------SSEEEESSCCGGGCEEEEEEETTS--
T ss_pred cCCCeEEECCCCEEEEEcCCCCCCCc-EEEEEECCEEcccC-------------ccEEEEecccccCCEEEEEEeCCC--
Confidence 35567899999999999999988653 47999999988642 278999999999999999999874
Q ss_pred ceEEEEEEEEeCCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCceEeecceeeeeeeccCCceeE
Q psy12061 167 KISTKTTVIVEGPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWFNVSEHVIGKEVDRYTGRKEA 246 (626)
Q Consensus 167 ~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 246 (626)
..+..+.|.|..+|...............+.|.|..... .+.. .+. |.+.+..+... .....+
T Consensus 77 ~~s~~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~--~p~~--~v~--------W~k~g~~~~~~-----~~~~~L 139 (204)
T 3sgj_C 77 TLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKN--TALH--KVT--------YLQNGKGRKYF-----HHNSDF 139 (204)
T ss_dssp BCCCCEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGG--CCCE--EEE--------EEETTEEEEEE-----EECCCE
T ss_pred cccccEEEEEecCceEecCCceeEeCCCcEEEEEEecCC--CCCc--eEE--------EEECCcEeecc-----cCCceE
Confidence 445567777776552100000122345667777774211 1111 222 33322222111 112245
Q ss_pred EEEeeccCCceEEEEEEEecCCc
Q psy12061 247 SIENVLVPWSTYEFKVIAGNELG 269 (626)
Q Consensus 247 ~i~~~l~~~~~y~~~v~a~n~~g 269 (626)
.+.+ +...+.+.|+|.|.|..+
T Consensus 140 ~i~~-v~~~D~G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 140 YIPK-ATLKDSGSYFCRGLVGSK 161 (204)
T ss_dssp EESS-CCGGGCEEEEEEEEETTE
T ss_pred EECc-CCcccCEEEEEEEEeCCC
Confidence 5655 899999999999999544
No 482
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.46 E-value=1.4e-13 Score=106.01 Aligned_cols=77 Identities=29% Similarity=0.519 Sum_probs=68.9
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCc---EEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGN---LLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~---L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.|.|.| |.|+|++..+..+.++.+..++. |.|.+++.+|+|.|+|. .|.....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~V~ 94 (103)
T 2e7b_A 20 VLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLTVT 94 (103)
T ss_dssp EESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEEEE
T ss_pred EECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEEEE
Confidence 5689999999999999999 99999999998888999888885 99999999999999998 5677788899998
Q ss_pred eCCce
Q psy12061 79 HGPSY 83 (626)
Q Consensus 79 ~~p~~ 83 (626)
.+|..
T Consensus 95 ~~p~~ 99 (103)
T 2e7b_A 95 ALPSG 99 (103)
T ss_dssp CCCCC
T ss_pred ecccc
Confidence 77754
No 483
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.45 E-value=2.5e-13 Score=102.55 Aligned_cols=86 Identities=27% Similarity=0.377 Sum_probs=73.1
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEEEE
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYECV 160 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~ 160 (626)
|+.+...|....+.+|++++|.|.+.+.| | .+.|+|+|..+... .++...++.|.|.+++.+|+|.|+|.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p--~i~W~k~g~~~~~~-------~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-Q--SINWLRDGVQLVES-------NRTRITGEEVEVRDSIPADSGLYACV 78 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-C--EEEEEBTTBCCCCC-------SSEEECSSEEEESSCCGGGSEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-C--ceEEEECCEecCCC-------CCEEEeCCEEEECCCChHHCEEEEEE
Confidence 33444557889999999999999999987 5 56999999988653 45666788999999999999999999
Q ss_pred EEeCCCceEEEEEEEE
Q psy12061 161 VKSTVGKISTKTTVIV 176 (626)
Q Consensus 161 a~n~~g~~~~~~~l~v 176 (626)
|.|..|..+..+.|.|
T Consensus 79 a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred eccCCCcEEEEEEEEE
Confidence 9999999888888876
No 484
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.45 E-value=2.6e-13 Score=101.56 Aligned_cols=70 Identities=19% Similarity=0.379 Sum_probs=60.8
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCCcEEEccCCCCCCEEEEEEEEcCCCCce-eeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENGNLLISPVSRDDSGIYSCTATNVHGMDE-SKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~v 77 (626)
+.+|++++|.|.+.|.|.|.+.|+|+|..+.... .++|.|.+++.+|+|.|+|.|.|..|... ..+.|.|
T Consensus 15 v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 15 LMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp ECTTSCEEEECEEECSSCCEEEEEETTEECTTCC------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEE
T ss_pred ecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC------CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEEEE
Confidence 5689999999999999999999999999986543 35799999999999999999999999754 3466666
No 485
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.45 E-value=3.3e-13 Score=105.52 Aligned_cols=103 Identities=22% Similarity=0.303 Sum_probs=82.7
Q ss_pred EEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccC
Q psy12061 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPD 462 (626)
Q Consensus 383 ~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 462 (626)
++|.++.|. +|.++++...+.+++.|+|++|... ++.|.+|.|+|+..+....... ........+.+.+|+|+
T Consensus 4 ~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~~----~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~ 76 (111)
T 1x5l_A 4 GSSGQAAPS-QVVVIRQERAGQTSVSLLWQEPEQP----NGIILEYEIKYYEKDKEMQSYS--TLKAVTTRATVSGLKPG 76 (111)
T ss_dssp CCCSCCCCC-CCCCEECSCBCSSCEEEEECCCSCC----CSCCCEEEEEEEESSSCCSSCE--EEEESSSEEEECSCCTT
T ss_pred EEcCCCCCC-CCceEEEEEcCCCEEEEEECCCCCC----CCEEEEEEEEEEECCCCceeEE--EecCCCCEEEEcCCCCC
Confidence 456677777 7889999889999999999998643 3679999999987764332222 22344567999999999
Q ss_pred ceEEEEEEEeeCCCCCCCCccEEEeecCCC
Q psy12061 463 TKYYVKVMAYNNAGEGPESERYLERTYRKA 492 (626)
Q Consensus 463 t~Y~v~V~a~~~~g~s~~s~~~~~~t~~~~ 492 (626)
+.|.|+|+|.|..|.|++|..+.++|....
T Consensus 77 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 106 (111)
T 1x5l_A 77 TRYVFQVRARTSAGCGRFSQAMEVETGKPS 106 (111)
T ss_dssp CEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred CEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence 999999999999999999999999988653
No 486
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.45 E-value=3.5e-13 Score=104.63 Aligned_cols=91 Identities=23% Similarity=0.477 Sum_probs=73.6
Q ss_pred CceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEe-cCC---eEEEeecCCCCCEe
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINI-DGG---LLEITNASFADAGE 156 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-~~~---~l~i~~~~~~d~g~ 156 (626)
|+.+...+....+.+|++++|.|.+.+.|.| .+.|+|++..+... .++.. .++ .|.|.+++.+|+|.
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p--~i~W~~~~~~~~~~-------~~~~~~~~~~~~~L~i~~~~~~D~G~ 83 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPP--VVVWEKGGQQLAAS-------ERLSFPADGAEHGLLLTAALPTDAGV 83 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEECCCC-------SSEECCEETTEEEEEESSCCGGGCEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCC--EEEEEECCeECCCC-------CcEEEEeCCCEEEEEEccCCHHhCEE
Confidence 3344456788999999999999999999887 56899999988754 22222 222 79999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
|+|.|.|..|..+..+.|.|..+|
T Consensus 84 Y~C~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 84 YVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC--
T ss_pred EEEEEEcCCCcEEEEEEEEEEcCC
Confidence 999999999999999999998776
No 487
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.45 E-value=1.5e-13 Score=103.44 Aligned_cols=90 Identities=22% Similarity=0.197 Sum_probs=71.6
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCC--EEeccccCCccCCCeeEecCCeEEEeecCCCCCEeE
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNG--VRIGNMDLNELETPNINIDGGLLEITNASFADAGEY 157 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y 157 (626)
+|.+ ..++....+..|++++|.|.+.|.|.|. +.|+|++ ..+..... .......+.|.|.+++.+|+|.|
T Consensus 2 ~P~i-~~~~~~~~v~~G~~~~l~C~~~g~P~p~--i~W~k~~~~~~~~~~~~-----~~~~~~~~~L~i~~~~~~D~G~Y 73 (93)
T 1wit_A 2 KPKI-LTASRKIKIKAGFTHNLEVDFIGAPDPT--ATWTVGDSGAALAPELL-----VDAKSSTTSIFFPSAKRADSGNY 73 (93)
T ss_dssp CCEE-CCCCCEEEECTTBCCEEEEEEECCSSCE--EEEECSTTTCBCSTTSE-----EEEETTEEEEECTTBCGGGCEEE
T ss_pred CCeE-EcCCCceEEeCCCEEEEEEEEEEcCCCE--EEEEECCCCcccCCcEE-----EEecCCEEEEEECCCChhcCEEE
Confidence 3555 3457789999999999999999999885 5899999 77754310 11122346799999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEe
Q psy12061 158 ECVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 158 ~C~a~n~~g~~~~~~~l~v~ 177 (626)
+|.|.|..|..+..+.|.|+
T Consensus 74 ~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 74 KLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEEEEC
Confidence 99999999999988888774
No 488
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.45 E-value=2.1e-13 Score=106.11 Aligned_cols=100 Identities=15% Similarity=0.245 Sum_probs=72.0
Q ss_pred ecCCCCCCCCceEEEeeeCCCEEEEEEeecCCCCCC----C-ceeeEEEEEEEeccCCccccceeeecCccceEEecCCC
Q psy12061 488 TYRKAPQKPPSAVHIKGINPTTVHVTWRYVSPSFEE----E-PIIGYKVRVWEVDQDMSRANDTIIPVGNTLDADIVDLS 562 (626)
Q Consensus 488 t~~~~p~~~p~~l~~~~~~~~~~~l~W~~~~~~~~~----~-~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 562 (626)
.....|+.+|..+.+..+..+++.|+|+ +|.+.+ . .|.+|.|+ ...... . ..........+.+++.+|+
T Consensus 10 ~~~~~pp~~P~~p~v~~vt~~Sv~LsW~--~p~~~g~~~g~~~I~~Y~ve-~~~~~~--~-~~~~v~~~~~t~~~v~gL~ 83 (120)
T 1wfu_A 10 PHKVVPLSKPHPPVVGKVTHHSIELYWD--LEQKEKRQGPQEQWLRFSIE-EEDPKM--H-SYGVIYTGYATRHVVEGLE 83 (120)
T ss_dssp CTTCCCCCCCCCCBCCCEETTEEEEECT--TTSCSCCCSCGGGCCEEEEE-EECTTT--C-CEEEEEEESCSEEEEESCC
T ss_pred EEeeCCCCCCCCceeceEECCEEEEEEC--CCccCCccCCCCceEEEEEE-EecCCC--C-ceEEEecCCccEEEECCCC
Confidence 3444556667777777788999999999 454432 3 39999998 332111 1 2233344456789999999
Q ss_pred CCceEEEEEEEEecCCCCCCCCCcEEEeeccc
Q psy12061 563 PGKRYHMRVLAFSNGGDGRMSSPAITFQMGEE 594 (626)
Q Consensus 563 p~~~Y~~~V~a~~~~G~g~~s~~~~~~~~~~~ 594 (626)
|++.|.|||+|.|..|.|++|.. +.++|...
T Consensus 84 p~t~Y~frV~A~n~~G~s~~S~~-~~~~T~~~ 114 (120)
T 1wfu_A 84 PRTLYKFRLKVTSPSGEYEYSPV-VSVATTRE 114 (120)
T ss_dssp TTCEEEEEEEEECSSSCEEECCC-EEEECCCC
T ss_pred CCCEEEEEEEEECCCCCCCCCcc-EeeEcCCC
Confidence 99999999999999999999955 55666654
No 489
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.45 E-value=2.5e-12 Score=113.03 Aligned_cols=162 Identities=14% Similarity=0.156 Sum_probs=98.0
Q ss_pred CCceEEecCCcEEEEEEecc-cCCcceeEEEeeCCEEeccccCCccCCCeeEecC--C--eEEEeecCCCCCEeEEEEEE
Q psy12061 88 PPKITIAAHRNLQLRCSAHT-EELLDVAYIWTHNGVRIGNMDLNELETPNINIDG--G--LLEITNASFADAGEYECVVK 162 (626)
Q Consensus 88 ~~~~~v~~g~~~~l~C~~~~-~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~--~--~l~i~~~~~~d~g~Y~C~a~ 162 (626)
+.+..+.+|+.+.|.|.+.. .|.| +|.|+|||.++.... ..++.... + .|.|.+++.+|+|.|+|.|.
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p--~i~W~kng~~l~~~~-----~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNA--KVNYIFNEKEIFEGP-----KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCC--EEEEEETTEEECSSS-----SCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCC--EEEEEECCEECccCC-----CEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 34788999999999999975 5665 569999999997542 12333322 2 69999999999999999999
Q ss_pred eCCCceEEEEEEEEe---------------------CCCCCCCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecC
Q psy12061 163 STVGKISTKTTVIVE---------------------GPPGLPGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNW 221 (626)
Q Consensus 163 n~~g~~~~~~~l~v~---------------------~~P~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~ 221 (626)
| |.......+.+. .+|.....+.........+.|.|...... |..
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~--P~p---------- 147 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIK--KET---------- 147 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCC--TTC----------
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCC--CCC----------
Confidence 9 665555554321 12221112222233445566666532110 111
Q ss_pred CCCceEeecceeeeeeec-cCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 222 NSTWFNVSEHVIGKEVDR-YTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 222 ~~~w~~~~~~~~~~~~~~-~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
...|.+.+..+....... ..+...+.|.+ +.+.+.+.|+|.|.|..|..
T Consensus 148 ~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~ 197 (207)
T 3rbs_A 148 HIVWYKDEREISVDEKHDFKDGICTLLITE-FSKKDAGIYEVILKDDRGKD 197 (207)
T ss_dssp EEEEEETTEEECCCCCCCCSSEEEEEEETT-CCGGGCEEEEEEEEETTEEE
T ss_pred EEEEEECCEECCCCCceEcCCCEEEEEECC-CCcccCEEEEEEEEcCCCEE
Confidence 123443332221111000 11222455655 99999999999999999865
No 490
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.45 E-value=7.8e-13 Score=101.18 Aligned_cols=93 Identities=23% Similarity=0.344 Sum_probs=74.7
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE-ecCC--eEEEeecCCCCCEe
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN-IDGG--LLEITNASFADAGE 156 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~-~~~~--~l~i~~~~~~d~g~ 156 (626)
+|.+. ..|....+.+|++++|.|.+.+.|.| .+.|+|+|..+..... .+.. ..++ .|.|.+++..|+|.
T Consensus 5 ~P~~~-~~p~~~~~~~G~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~D~G~ 76 (100)
T 2kdg_A 5 PPRFI-QVPENMSIDEGRFCRMDFKVSGLPAP--DVSWYLNGRTVQSDDL-----HKMIVSEKGLHSLIFEVVRASDAGA 76 (100)
T ss_dssp EEECC-CCCCCEEEETTCCEEEEEECEEESCC--EEEEEETTEEECCCSS-----SCEEEETTTEEEEEESSCCGGGCEE
T ss_pred CCeEE-eCCCCEEecCCCEEEEEEEEEeeCCC--EEEEEECCEECcCCCc-----EEEEEcCCCeEEEEECCCCcccCEE
Confidence 44444 35788999999999999999999887 5689999999876421 1222 2333 89999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeCCC
Q psy12061 157 YECVVKSTVGKISTKTTVIVEGPP 180 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~~P 180 (626)
|+|.|.|..|..+..+.|.|...+
T Consensus 77 Y~C~a~n~~g~~~~~~~l~V~~~e 100 (100)
T 2kdg_A 77 YACVAKNRAGEATFTVQLDVLAKE 100 (100)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEEEcCCCeEEEEEEEEEEecC
Confidence 999999999999999999987643
No 491
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.44 E-value=7.3e-13 Score=115.91 Aligned_cols=166 Identities=20% Similarity=0.280 Sum_probs=105.1
Q ss_pred CceeeeCCCceEEecCCcEEEEEEec-ccCCcceeEEEeeCCEEeccccCCccCCCeeEec---------CCeEEEeecC
Q psy12061 81 PSYYEQLPPKITIAAHRNLQLRCSAH-TEELLDVAYIWTHNGVRIGNMDLNELETPNINID---------GGLLEITNAS 150 (626)
Q Consensus 81 p~~~~~~~~~~~v~~g~~~~l~C~~~-~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~i~~~~ 150 (626)
|.+. ..|.+..+.+|++++|.|.+. +.|.+ .+.|+|+|..+..... ...++... .+.|.|.+++
T Consensus 3 ~~~~-~~p~~~~v~~G~~v~l~C~~~~~~p~~--~v~W~~~g~~l~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~~~ 76 (195)
T 2c5d_C 3 SPFV-GNPGNITGARGLTGTLRCQLQVQGEPP--EVHWLRDGQILELADS---TQTQVPLGEDEQDDWIVVSQLRITSLQ 76 (195)
T ss_dssp CSEE-ECCCCEEECTTCCEEEEEEEEEESSCC--CCEEEETTEECCSCEE---EEEEEECSSSTTSEEEEEEEEEESSCC
T ss_pred Ceec-cChhheEEecCCcEEEecccccCCCCc--EEEEEECCEEcccCCC---CceEEEEccccccceeeccEEEEEecc
Confidence 4444 468899999999999999999 88776 4589999999875420 00122221 3689999999
Q ss_pred CCCCEeEEEEEEeCCCceEE-EEEEEEeCCCCC---CCceEEEEEeccceEEEEecCCCCCCcccEEEEEEeecCCCCce
Q psy12061 151 FADAGEYECVVKSTVGKIST-KTTVIVEGPPGL---PGGVQVVEVHKTSATIQWTDGATNGRPITHYKIIARTNWNSTWF 226 (626)
Q Consensus 151 ~~d~g~Y~C~a~n~~g~~~~-~~~l~v~~~P~~---p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~~w~ 226 (626)
..|+|.|+|.+.|..|.... .+.|.|..+|.. |.... ......+.|.|..... ..+. .+ .|.
T Consensus 77 ~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~--~~~g~~~~l~C~~~g~-p~p~---~v--------~W~ 142 (195)
T 2c5d_C 77 LSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRT--VAANTPFNLSCQAQGP-PEPV---DL--------LWL 142 (195)
T ss_dssp STTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEE--ECTTCCEEEEEEEECS-SCCC---EE--------EEE
T ss_pred ccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEE--EcCCCEEEEEeECCCC-CCCC---EE--------EEE
Confidence 99999999999998886544 488888887632 22221 2234556777764211 1110 12 233
Q ss_pred EeecceeeeeeeccCCceeEEEEeeccCCceEEEEEEEecCCccC
Q psy12061 227 NVSEHVIGKEVDRYTGRKEASIENVLVPWSTYEFKVIAGNELGYG 271 (626)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~y~~~v~a~n~~g~~ 271 (626)
+....+.... .......+.+.+ +. +.+.|+|.|.|..|..
T Consensus 143 ~~~~~~~~~~--~~~~~~~L~i~~-~~--d~G~Y~C~a~N~~g~~ 182 (195)
T 2c5d_C 143 QDAVPLATAP--GHGPQRSLHVPG-LN--KTSSFSCEAHNAKGVT 182 (195)
T ss_dssp ESSCBSSSST--TSSCCEEEEECC-CS--SCEEEEEEEEETTEEE
T ss_pred ECCEeccCCC--CcCCCCeEEEcc-cc--cCceEEEEEEcCCCce
Confidence 3222221110 001233455544 55 5789999999999855
No 492
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=5.7e-13 Score=101.71 Aligned_cols=91 Identities=16% Similarity=0.188 Sum_probs=72.8
Q ss_pred CCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeE---ecCCeEEEeecCCCCCEe
Q psy12061 80 GPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNIN---IDGGLLEITNASFADAGE 156 (626)
Q Consensus 80 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~g~ 156 (626)
+|.+. ..+.+..+.+|++++|.|.+.+.|.| .+.|+|+|..+..... .... .....|.|.+++.+|+|.
T Consensus 5 ~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p--~v~W~k~g~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~D~G~ 76 (99)
T 1g1c_A 5 APKIF-ERIQSQTVGQGSDAHFRVRVVGKPDP--ECEWYKNGVKIERSDR-----IYWYWPEDNVCELVIRDVTGEDSAS 76 (99)
T ss_dssp EEEEE-ECCCCEEEETTSCEEEEEEEEEESCC--EEEEEETTEECCCCSS-----EEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCceE-ecCcceEEcCCCcEEEEEEEEEeCCC--EEEEEECCEECCCCCC-----EEEEEcCCCEEEEEECCCCcCCCEE
Confidence 34443 35788899999999999999999887 4589999999875421 1111 123379999999999999
Q ss_pred EEEEEEeCCCceEEEEEEEEeC
Q psy12061 157 YECVVKSTVGKISTKTTVIVEG 178 (626)
Q Consensus 157 Y~C~a~n~~g~~~~~~~l~v~~ 178 (626)
|+|.|.|..|..+..+.|.|..
T Consensus 77 Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 77 IMVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCcEEEEEEEEEec
Confidence 9999999999999999998865
No 493
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=2.1e-13 Score=104.39 Aligned_cols=72 Identities=24% Similarity=0.380 Sum_probs=62.4
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCC-CcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSG-GRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIV 77 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~-~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v 77 (626)
+.+|++++|.|.+ +.|.|.|.|+|||..|..+ .++.+..+| +|.|.+++.+|+|.|+|.| +.....+.|.|
T Consensus 28 v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V 102 (104)
T 1pd6_A 28 VSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFV 102 (104)
T ss_dssp EETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE----TTEEECCEEEE
T ss_pred EecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE----CCCcEEEEEEE
Confidence 5689999999999 7899999999999999877 788887667 7999999999999999999 44566677776
Q ss_pred E
Q psy12061 78 L 78 (626)
Q Consensus 78 ~ 78 (626)
.
T Consensus 103 ~ 103 (104)
T 1pd6_A 103 K 103 (104)
T ss_dssp E
T ss_pred e
Confidence 4
No 494
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.44 E-value=6.4e-13 Score=103.42 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=79.5
Q ss_pred CCCCCCCCCceEE-EeeecceEEEEeeeccccccccceeeEEEEEEEEecCCCccceEEEEecCccceEEEeCCccCceE
Q psy12061 387 EDMPQVAPQGVFS-RGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKEDNPEETAVYYLSRTTRNWALIVGLQPDTKY 465 (626)
Q Consensus 387 ~~~p~~~p~~~~~-~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 465 (626)
...|. +|.++.+ ...+.+++.|+|++|...+ ++.|.+|.|+|+......+.... ......+++.+|.+++.|
T Consensus 6 ~~~P~-~P~~~~~~~~~~~~sv~l~W~~P~~~~---~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~v~~L~p~t~Y 78 (110)
T 2crz_A 6 SGPPG-PCLPPRLQGRPKAKEIQLRWGPPLVDG---GSPISCYSVEMSPIEKDEPREVY---QGSEVECTVSSLLPGKTY 78 (110)
T ss_dssp CCCCC-CCCCCEECSCCCSSEEEEECCCCSCCT---TSCCCEEEEEEECTTSCCCEEEE---EESCSEEEEESCCTTCEE
T ss_pred CCCCC-CCCCceeccccCCCEEEEEeCCCCCCC---CceeEEEEEEEEeCCCCceEEEE---eCCcEEEEECCcCCCCEE
Confidence 44454 8889888 5678889999998775432 36689999999876554443322 344567999999999999
Q ss_pred EEEEEEeeCCCCCCCCccEEEeecCCCCC
Q psy12061 466 YVKVMAYNNAGEGPESERYLERTYRKAPQ 494 (626)
Q Consensus 466 ~v~V~a~~~~g~s~~s~~~~~~t~~~~p~ 494 (626)
.|+|+|.|..|.|++|....+.|....|.
T Consensus 79 ~frV~A~n~~G~g~~S~~~~~~T~~~~P~ 107 (110)
T 2crz_A 79 SFRLRAANKMGFGPFSEKCDITTAPGSGP 107 (110)
T ss_dssp EECCEEECSSCBCCCCCCEEEECCCSCCC
T ss_pred EEEEEEEcCCccCCCCCccccccCCCCCC
Confidence 99999999999999999999999877664
No 495
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=9.6e-13 Score=102.48 Aligned_cols=95 Identities=17% Similarity=0.243 Sum_probs=72.6
Q ss_pred CCCCCceEEEeeeCCCEEEEEEeecCCC-CCCCceeeEEEEEEEeccCCccccceee-ecCccceEEecCCCCCceEEEE
Q psy12061 493 PQKPPSAVHIKGINPTTVHVTWRYVSPS-FEEEPIIGYKVRVWEVDQDMSRANDTII-PVGNTLDADIVDLSPGKRYHMR 570 (626)
Q Consensus 493 p~~~p~~l~~~~~~~~~~~l~W~~~~~~-~~~~~i~~Y~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~~~Y~~~ 570 (626)
++.+|.++++...+.+++.|+|+ +|. +++..|.+|.|+|+..+... +.... .....+.+.+.+|.+++.|.|+
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~--~p~~~g~~~i~~Y~v~~~~~~~~~---w~~~~~~~~~~~~~~v~~L~p~t~Y~fr 81 (110)
T 2yuw_A 7 GTSPPTLLTVDSVTDTTVTMRWR--PPDHIGAAGLDGYVLEYCFEGTED---WIVANKDLIDKTKFTITGLPTDAKIFVR 81 (110)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEE--CCSSCCSSCEEEEEEEEEETTCSS---EEECCSSCCCSSEEEECSCCTTCEEEEE
T ss_pred CCCCCCccEEEeccCCeEEEEEC--CCCCCCCCCccEEEEEEEECCCcc---ceEeccccCccCEEEECCCCCCCEEEEE
Confidence 34588899999999999999999 444 34568999999988754431 11111 1236788999999999999999
Q ss_pred EEEEecCCCCCCCCCcEEEeec
Q psy12061 571 VLAFSNGGDGRMSSPAITFQMG 592 (626)
Q Consensus 571 V~a~~~~G~g~~s~~~~~~~~~ 592 (626)
|+|+|..|.|++|.....+++.
T Consensus 82 V~A~n~~G~s~~S~~~~~v~~~ 103 (110)
T 2yuw_A 82 VKAVNAAGASEPKYYSQPILVK 103 (110)
T ss_dssp EEEEETTEECCCEECSSCEECC
T ss_pred EEEEcCCcCCCCcCCCCCEEec
Confidence 9999999999998765445444
No 496
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.44 E-value=9.5e-13 Score=104.51 Aligned_cols=104 Identities=21% Similarity=0.130 Sum_probs=78.1
Q ss_pred EEccCCCCCCCCCceEEEeeecceEEEEeeeccccccccceeeEEEEEEEEecC-CCccceEEEEecCccceEEEeCCcc
Q psy12061 383 IFSAEDMPQVAPQGVFSRGFNSTAINVTWNPIELIRENIRGRLIGHRIKYWKED-NPEETAVYYLSRTTRNWALIVGLQP 461 (626)
Q Consensus 383 ~~t~~~~p~~~p~~~~~~~~~~~si~l~W~~~~~~~~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~~~~~~i~~L~p 461 (626)
..+....|. +|.++++...+.+++.|+|+++.+. ++.|.+|.|+|+... ...+.............+++.+|+|
T Consensus 11 ~~~~~~~P~-~P~~~~~~~~~~~sv~l~W~p~~~~----~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p 85 (121)
T 1x4z_A 11 DHGRLSPPE-APDRPTISTASETSVYVTWIPRGNG----GFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEK 85 (121)
T ss_dssp CSSSCCCCC-CCCCCEEEECCSSEEEEECCCCCCT----TSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCT
T ss_pred ccCcCCCCc-cCCCCEEEEccCCEEEEEEECCCCC----CCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCC
Confidence 344445555 8999999999999999999965433 256899999998776 3334333223245567799999999
Q ss_pred CceEEEEEEEeeCCCCCCCCccEE-EeecCC
Q psy12061 462 DTKYYVKVMAYNNAGEGPESERYL-ERTYRK 491 (626)
Q Consensus 462 ~t~Y~v~V~a~~~~g~s~~s~~~~-~~t~~~ 491 (626)
++.|.|+|+|.|..|.|++|.... +++...
T Consensus 86 ~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 86 GISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp TCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 999999999999999999887664 555543
No 497
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.44 E-value=7.3e-14 Score=108.11 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=65.1
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+.+.|.+ |.|+|||..+..+.++.+..++ +|.|.+++.+|+|.|+|.|.|. .....+.|.|.
T Consensus 20 v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 20 VKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBCEEEE
T ss_pred EeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC--CceEEEEEEEE
Confidence 5689999999999999887 9999999999888888887766 7999999999999999999998 44566777775
No 498
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=102.51 Aligned_cols=72 Identities=22% Similarity=0.372 Sum_probs=63.5
Q ss_pred CCCCceEEEEeeeCCCCCCeeEEEeCCEEccCCCcEEEccCC---cEEEccCCCCCCEEEEEEEEcCCCCceeeEEEEEE
Q psy12061 2 AGEGGNVTIFCNPEAAPKPKFVWKKDGNIIGSGGRRKIFENG---NLLISPVSRDDSGIYSCTATNVHGMDESKGRLIVL 78 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g~p~p~i~W~~~~~~i~~~~~~~~~~~g---~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 78 (626)
+.+|++++|.|.+ +.|.+.|.|+|||..|..+.++.+..++ +|.|.+++.+|+|.|+|.| |.....+.|.|.
T Consensus 20 v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 20 VAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKVI 94 (95)
T ss_dssp EETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEEE
T ss_pred EeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEEe
Confidence 5689999999999 7899999999999999888888887666 5999999999999999999 666777888774
No 499
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=103.69 Aligned_cols=90 Identities=22% Similarity=0.392 Sum_probs=72.9
Q ss_pred eCCceeeeCCCceEEecCCcEEEEEEecccCCcceeEEEeeCCEEeccccCCccCCCeeEecCCeEEEeecCCCCCEeEE
Q psy12061 79 HGPSYYEQLPPKITIAAHRNLQLRCSAHTEELLDVAYIWTHNGVRIGNMDLNELETPNINIDGGLLEITNASFADAGEYE 158 (626)
Q Consensus 79 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~p~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~ 158 (626)
.+|.+. ..|.+..+.+|++++|.|.+.+.|.|. +.|+|+|..+.... .........|.|.+++.+|+|.|+
T Consensus 10 ~~P~~~-~~~~~~~v~~G~~v~l~C~~~g~p~p~--v~W~~~g~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~Y~ 80 (99)
T 2yr3_A 10 VAPSFS-SVLKDCAVIEGQDFVLQCSVRGTPVPR--ITWLLNGQPIQYAR------STCEAGVAELHIQDALPEDHGTYT 80 (99)
T ss_dssp EEEEEE-ECCCCEEECTTCCEEEECEEEEESCCC--CEEEESSSBCSSCC------CEEETTEEEEEECSCCTTCCBCEE
T ss_pred cCCcee-ecCCCCEEeCCCeEEEEEEEeeeCCCe--EEEEECCEECcccc------eEeeCCeEEEEECCCChhhCEEEE
Confidence 345444 457788999999999999999999875 58999998886532 223334568999999999999999
Q ss_pred EEEEeCCCceEEEEEEEEe
Q psy12061 159 CVVKSTVGKISTKTTVIVE 177 (626)
Q Consensus 159 C~a~n~~g~~~~~~~l~v~ 177 (626)
|.|.|..|..+..+.|.|+
T Consensus 81 C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 81 CLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEEECSSCEEEEECCEEEC
T ss_pred EEEEECCCeEEEEEEEEEC
Confidence 9999999998888888763
No 500
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.44 E-value=3.1e-13 Score=124.32 Aligned_cols=169 Identities=17% Similarity=0.249 Sum_probs=106.4
Q ss_pred CCCCceEEEEeeeCC--CCCCeeEEEeC--CEE---c---c-----------CCCcEEEccCC-----cEEEccCCCCCC
Q psy12061 2 AGEGGNVTIFCNPEA--APKPKFVWKKD--GNI---I---G-----------SGGRRKIFENG-----NLLISPVSRDDS 55 (626)
Q Consensus 2 ~~~G~~~~l~C~~~g--~p~p~i~W~~~--~~~---i---~-----------~~~~~~~~~~g-----~L~i~~v~~~d~ 55 (626)
+.+|++|+|.|.+.+ .....+.|+|. +.. + . ..+|+.+..++ +|.|.+++.+|+
T Consensus 35 ~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 114 (267)
T 3u1s_H 35 KKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDT 114 (267)
T ss_dssp ECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGGGC
T ss_pred EeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChhhC
Confidence 578999999999975 24468999983 211 1 0 12577765443 399999999999
Q ss_pred EEEEEEEEcC------CC-------------------CceeeEEEEEEe----CCceeeeCCCceEEecCCcEEEEEEec
Q psy12061 56 GIYSCTATNV------HG-------------------MDESKGRLIVLH----GPSYYEQLPPKITIAAHRNLQLRCSAH 106 (626)
Q Consensus 56 G~Y~C~a~n~------~g-------------------~~~~~~~l~v~~----~p~~~~~~~~~~~v~~g~~~~l~C~~~ 106 (626)
|.|.|.+.+. .+ .....+.|.|.. +|.+...+|.. .+..|+.++|.|.+.
T Consensus 115 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~-~~~~g~~~~l~C~~~ 193 (267)
T 3u1s_H 115 AIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSS-KSTSGGTAALGCLVK 193 (267)
T ss_dssp EEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCG-GGEETTEEEEEEEEE
T ss_pred EEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCc-ccCCCCcEEEEEEEe
Confidence 9999999721 11 111235677752 34443323322 235799999999999
Q ss_pred ccCCcceeEEEeeCCEEeccccC----CccCCCeeEecCCeEEEeecCCCCCEeEEEEEEeCCCceEEEEEEE
Q psy12061 107 TEELLDVAYIWTHNGVRIGNMDL----NELETPNINIDGGLLEITNASFADAGEYECVVKSTVGKISTKTTVI 175 (626)
Q Consensus 107 ~~p~p~~~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~Y~C~a~n~~g~~~~~~~l~ 175 (626)
+..++.+++.| ++..+..... ....+..+. -.+.|.|......| +.|+|.+.+..+.......+.
T Consensus 194 ~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~-~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 262 (267)
T 3u1s_H 194 DYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYS-LSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 262 (267)
T ss_dssp EEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEE-EEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEECCCeEEEE--CCcccCCCEEeCCceECCCCCEE-EEEEEEECchhcCC-CEEEEEEEECCCCcceEEEcc
Confidence 85444578899 5544432100 000011111 12468888888888 999999999887655544443
Done!