BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12064
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8K0T7|UN13C_MOUSE Protein unc-13 homolog C OS=Mus musculus GN=Unc13c PE=1 SV=3
Length = 2210
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 103/202 (50%), Gaps = 64/202 (31%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
K L+P+QCA+++ L +IK YFHA GNGLKK +L+KSP+L SLRYALSLYTQTTDALIK
Sbjct: 1964 KGLTPRQCAIVEVVLATIKQYFHAGGNGLKKNFLEKSPDLHSLRYALSLYTQTTDALIKK 2023
Query: 63 FVQSQCNEGR---DLIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKH- 118
F+++Q ++ R D +G +H+ V D + V V V+ + D+ Q
Sbjct: 2024 FIETQGSQSRSSKDAVGQ------ISVHVDVTTTPGTGDHK-VTVKVIAINDLNWQTTAM 2076
Query: 119 -----QICV------------------------------------------------KDY 125
++C+ KDY
Sbjct: 2077 FRPFVEVCMLGPSLGDKKRKQGTKTKSNTWSPKYNETFQFILGNENRPGAYELHLSVKDY 2136
Query: 126 CFARDDRLVGVAVLQLKDIVEQ 147
CFAR+DR++G+ V+QL++I E+
Sbjct: 2137 CFAREDRIIGMTVIQLQNIAEK 2158
>sp|O14795|UN13B_HUMAN Protein unc-13 homolog B OS=Homo sapiens GN=UNC13B PE=1 SV=2
Length = 1591
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 62/69 (89%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
++L+PKQCA+LD +LD+IK YFHA GNGLKKT+L+KSP+L SLRYALSLYTQTTD LIKT
Sbjct: 1345 RNLTPKQCAVLDLALDTIKQYFHAGGNGLKKTFLEKSPDLQSLRYALSLYTQTTDTLIKT 1404
Query: 63 FVQSQCNEG 71
FV+SQ +G
Sbjct: 1405 FVRSQTTQG 1413
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIV 113
L+GNEE E +EL ICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1498 LLGNEEGPESYELQICVKDYCFAREDRVLGLAVMPLRDVT 1537
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145
E + QICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1506 ESYELQICVKDYCFAREDRVLGLAVMPLRDVT 1537
>sp|Q9Z1N9|UN13B_MOUSE Protein unc-13 homolog B OS=Mus musculus GN=Unc13b PE=2 SV=2
Length = 1602
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 62/69 (89%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
++L+PKQCA+LD +LD+IK YFHA GNGLKKT+L+KSP+L SLRYALSLYTQTTD LIKT
Sbjct: 1356 RNLTPKQCAVLDLALDTIKQYFHAGGNGLKKTFLEKSPDLQSLRYALSLYTQTTDTLIKT 1415
Query: 63 FVQSQCNEG 71
FV+SQ +G
Sbjct: 1416 FVRSQTAQG 1424
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIV 113
L+GNEE E +EL ICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1509 LLGNEEGPEAYELQICVKDYCFAREDRVIGLAVMPLRDVA 1548
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIV 145
QICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1522 QICVKDYCFAREDRVIGLAVMPLRDVA 1548
>sp|Q4KUS2|UN13A_MOUSE Protein unc-13 homolog A OS=Mus musculus GN=Unc13a PE=1 SV=3
Length = 1712
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 102/196 (52%), Gaps = 52/196 (26%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
KSL+PKQCA+++ +LD+IK YFHA G GLKKT+L+KSP+L SLRYALSLYTQ TD LIKT
Sbjct: 1461 KSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKT 1520
Query: 63 FVQSQCNEG---RDLIGN-EEQLEFF------ELHICVKDYCFARDDRL----------- 101
FVQ+Q +G D +G +E F E + VK A D +
Sbjct: 1521 FVQTQSAQGSGVEDPVGEVSVHVELFTHPGTGEQKVTVK-VVAANDLKWQTSGIFRPFIE 1579
Query: 102 VGVAVLQLKD----IVEQVKHQICVKDY--------------------------CFARDD 131
V + QL D + K+ Y CFAR+D
Sbjct: 1580 VNIVGPQLSDKKRKFATKSKNNSWAPKYNESFQFSLSADAGPECYELQVCVKDYCFARED 1639
Query: 132 RLVGVAVLQLKDIVEQ 147
R VG+AVLQL+++ ++
Sbjct: 1640 RTVGLAVLQLRELAQR 1655
>sp|Q62769|UN13B_RAT Protein unc-13 homolog B OS=Rattus norvegicus GN=Unc13b PE=1 SV=2
Length = 1622
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 63/74 (85%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
++L+PKQCA+LD +LD++K YFHA GNGLKKT+L+KSP+L SLRYALSLYTQTTD LIKT
Sbjct: 1357 RNLTPKQCAVLDLALDTVKQYFHAGGNGLKKTFLEKSPDLQSLRYALSLYTQTTDTLIKT 1416
Query: 63 FVQSQCNEGRDLIG 76
FV+SQ + D G
Sbjct: 1417 FVRSQTAQVHDGKG 1430
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIV 113
L+GNEE E +EL ICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1529 LLGNEEGPEAYELQICVKDYCFAREDRVIGLAVMPLRDVA 1568
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 25/27 (92%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIV 145
QICVKDYCFAR+DR++G+AV+ L+D+
Sbjct: 1542 QICVKDYCFAREDRVIGLAVMPLRDVA 1568
>sp|Q9UPW8|UN13A_HUMAN Protein unc-13 homolog A OS=Homo sapiens GN=UNC13A PE=2 SV=4
Length = 1703
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%), Gaps = 3/86 (3%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
KSL+PKQCA+++ +LD+IK YFHA G GLKKT+L+KSP+L SLRYALSLYTQ TD LIKT
Sbjct: 1452 KSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKT 1511
Query: 63 FVQSQCNEGRDLIGNEEQLEFFELHI 88
FVQ+Q +G +G E+ + +H+
Sbjct: 1512 FVQTQSAQG---LGVEDPVGEVSVHV 1534
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 30/34 (88%)
Query: 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115
E +EL +CVKDYCFAR+DR VG+AVLQL+++ ++
Sbjct: 1613 ECYELQVCVKDYCFAREDRTVGLAVLQLRELAQR 1646
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIVEQ 147
Q+CVKDYCFAR+DR VG+AVLQL+++ ++
Sbjct: 1618 QVCVKDYCFAREDRTVGLAVLQLRELAQR 1646
>sp|Q62768|UN13A_RAT Protein unc-13 homolog A OS=Rattus norvegicus GN=Unc13a PE=1 SV=1
Length = 1735
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 58/65 (89%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
KSL+PKQCA+++ +LD+IK YFHA G GLKKT+L+KSP+L SLRYALSLYTQ TD LIKT
Sbjct: 1465 KSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKT 1524
Query: 63 FVQSQ 67
FVQ+Q
Sbjct: 1525 FVQTQ 1529
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115
E +EL +CVKDYCFAR+DR V +AVLQL+++ ++
Sbjct: 1645 ECYELQVCVKDYCFAREDRTVELAVLQLRELAQR 1678
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIVEQ 147
Q+CVKDYCFAR+DR V +AVLQL+++ ++
Sbjct: 1650 QVCVKDYCFAREDRTVELAVLQLRELAQR 1678
>sp|P27715|UNC13_CAEEL Phorbol ester/diacylglycerol-binding protein unc-13 OS=Caenorhabditis
elegans GN=unc-13 PE=1 SV=4
Length = 2155
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 2 EKSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIK 61
EKSL+P+QC +LD +LD+IK+ FHA+G GLKK++ +KSPEL SL+YALSLYTQTT+ LIK
Sbjct: 1893 EKSLTPRQCTVLDCALDAIKDSFHASGKGLKKSFFEKSPELQSLKYALSLYTQTTEQLIK 1952
Query: 62 TFVQSQCNEGRDLIGNEE 79
TF+ SQ +DL E+
Sbjct: 1953 TFITSQ--RQQDLPSQEQ 1968
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115
+GNE + E +EL VKDYCFARDDR+VGV VLQL +V+Q
Sbjct: 2048 FLGNEGEPEHYELMFQVKDYCFARDDRVVGVGVLQLSSVVDQ 2089
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 122 VKDYCFARDDRLVGVAVLQLKDIVEQ 147
VKDYCFARDDR+VGV VLQL +V+Q
Sbjct: 2064 VKDYCFARDDRVVGVGVLQLSSVVDQ 2089
>sp|Q62770|UN13C_RAT Protein unc-13 homolog C OS=Rattus norvegicus GN=Unc13c PE=1 SV=3
Length = 2204
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/70 (64%), Positives = 59/70 (84%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
K L+P+QCA+++ L +IK YFHA GNGLKK +L+KSP+L SLRYALSLYTQTTDALIK
Sbjct: 1958 KGLTPRQCAIMEVVLATIKQYFHAGGNGLKKNFLEKSPDLHSLRYALSLYTQTTDALIKK 2017
Query: 63 FVQSQCNEGR 72
F+++Q ++ R
Sbjct: 2018 FIETQGSQSR 2027
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115
++GNE + +ELH+ VKDYCFAR+DR++G+ V+QL++I E+
Sbjct: 2111 ILGNENRPGAYELHLSVKDYCFAREDRIIGMTVIQLQNIAEK 2152
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIVEQ 147
+ VKDYCFAR+DR++G+ V+QL++I E+
Sbjct: 2124 HLSVKDYCFAREDRIIGMTVIQLQNIAEK 2152
>sp|Q8NB66|UN13C_HUMAN Protein unc-13 homolog C OS=Homo sapiens GN=UNC13C PE=2 SV=3
Length = 2214
Score = 100 bits (248), Expect = 5e-21, Method: Composition-based stats.
Identities = 44/70 (62%), Positives = 58/70 (82%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
+ L+P+QCA+++ L +IK YFHA GNGLKK +L+KSP+L SLRYALSLYTQTTDALIK
Sbjct: 1968 RGLTPRQCAIMEVVLATIKQYFHAGGNGLKKNFLEKSPDLQSLRYALSLYTQTTDALIKK 2027
Query: 63 FVQSQCNEGR 72
F+ +Q ++ R
Sbjct: 2028 FIDTQTSQSR 2037
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 34/42 (80%)
Query: 74 LIGNEEQLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115
++G E + +ELH+ VKDYCFAR+DR++G+ V+QL++I E+
Sbjct: 2121 ILGKENRPGAYELHLSVKDYCFAREDRIIGMTVIQLQNIAEK 2162
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 119 QICVKDYCFARDDRLVGVAVLQLKDIVEQ 147
+ VKDYCFAR+DR++G+ V+QL++I E+
Sbjct: 2134 HLSVKDYCFAREDRIIGMTVIQLQNIAEK 2162
>sp|O13683|YDY2_SCHPO Uncharacterized protein C11E3.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC11E3.02c PE=4 SV=1
Length = 1237
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62
K LSP Q A++ L +K+YF+A G G+K L+ LR Y + TD L++
Sbjct: 1071 KPLSPAQMAIVYRWLQFLKDYFYANGEGVKLPVLETDHYKELLRVQ-EYYDKPTDFLLQE 1129
Query: 63 F--VQSQCNEGRDLIGNE 78
+ SQ ++ NE
Sbjct: 1130 CDKIASQLYLSSRMVNNE 1147
>sp|Q970U7|CARB_SULTO Carbamoyl-phosphate synthase large chain OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=carB
PE=3 SV=1
Length = 1049
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 31 LKKTYLDKSPELASLRYALSLYTQTTDALIKTFVQSQCN-----EGRDLIGNEEQLEFFE 85
LK Y PE+ S A SL T DAL+K+++ S N EG L+ +E+
Sbjct: 892 LKGAYPFLGPEMKSTGEAASLGTDFYDALLKSWLSSSPNKIPNKEGIALVYGTTNVEY-- 949
Query: 86 LHICVK---DY---CFARDDRLVGVAVLQLKDIVEQVKH---QICVKD 124
L I K DY + + +G+ + DI+E +K+ +I V D
Sbjct: 950 LKIAAKNLIDYGITVYTLSEASIGIEEKSINDIIELIKNRKVEIVVTD 997
>sp|P77743|PRPR_ECOLI Propionate catabolism operon regulatory protein OS=Escherichia coli
(strain K12) GN=prpR PE=1 SV=1
Length = 528
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 13 LDASLDSIKNYFH-AAGNGLKKTY-----LDKSPELASLRYALSLYTQTTDALIKTFVQS 66
LD + S+++ H A N L+ Y L +SP++ +R + LY +++ A++ ++
Sbjct: 190 LDMTRMSLRHNTHDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVL---IEG 246
Query: 67 QCNEGRDLIGNEEQLEFFELH 87
+ G++L E+F H
Sbjct: 247 ETGTGKELAAQAIHREYFARH 267
>sp|P32361|IRE1_YEAST Serine/threonine-protein kinase/endoribonuclease IRE1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IRE1 PE=1 SV=2
Length = 1115
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 104 VAVLQLKDIVEQVKHQICVKDYCFARDDRLVGVAV----LQLKDIVEQK 148
+A++++K + E H ++ YC DR + +A+ L L+D+VE K
Sbjct: 711 IALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESK 759
>sp|A8ZWH0|KDSB_DESOH 3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=kdsB PE=3 SV=1
Length = 248
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 101 LVGVAVLQLKDIVEQVKHQICVKDYCFARDDRLVGVAVLQL 141
+ G+ ++Q + +QVK ICV D A DDR + AV +
Sbjct: 24 IAGIPMIQR--VYDQVKQAICVTDIAVATDDRRIVEAVTRF 62
>sp|A2SL47|HRCA_METPP Heat-inducible transcription repressor HrcA OS=Methylibium
petroleiphilum (strain PM1) GN=hrcA PE=3 SV=1
Length = 342
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 34 TYLDKSPELASLRYALSLYTQTTDALIKTFVQSQCNEGRDLIGNEEQLEFFELHICVKDY 93
T D S ++ SLR L+ Q T + V S+ R IG E Q+ FE + V
Sbjct: 241 TMQDFSSDMGSLRKLFDLFEQKTQLMRLLDVSSRAEGVRIYIGGESQIVPFE-ELSVVSA 299
Query: 94 CFARDDRLVG 103
+ D ++VG
Sbjct: 300 PYEVDGKIVG 309
>sp|Q09140|UGGG_SCHPO UDP-glucose:glycoprotein glucosyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=gpt1 PE=1 SV=2
Length = 1448
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 12 LLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYT 53
LLDA + K + N LK+ Y+ EL+SL+++L L++
Sbjct: 61 LLDAENTTEKELYINVVNSLKREYVLSDEELSSLQFSLGLFS 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,749,753
Number of Sequences: 539616
Number of extensions: 2014016
Number of successful extensions: 3840
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3806
Number of HSP's gapped (non-prelim): 40
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)