Query psy12064
Match_columns 148
No_of_seqs 92 out of 94
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 17:45:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swh_A MUNC13-1, protein UNC-1 99.9 2.2E-23 7.4E-28 176.9 3.4 68 2-69 274-341 (341)
2 3l9b_A Otoferlin; C2-domain, b 94.2 0.05 1.7E-06 41.9 4.4 53 82-136 78-130 (144)
3 2dmh_A Myoferlin; beta-sandwic 93.4 0.47 1.6E-05 32.6 7.9 60 82-141 68-129 (140)
4 1wfj_A Putative elicitor-respo 92.4 0.29 9.8E-06 33.6 5.5 58 82-142 69-127 (136)
5 1rlw_A Phospholipase A2, CALB 91.3 0.51 1.7E-05 31.8 5.7 57 80-142 66-122 (126)
6 2chd_A Rabphilin-3A, exophilin 90.8 0.38 1.3E-05 33.3 4.8 36 84-119 98-133 (142)
7 1v27_A Regulating synaptic mem 89.6 0.5 1.7E-05 32.3 4.5 36 81-116 87-124 (141)
8 3f04_A Synaptotagmin-1; C2A, c 89.6 0.59 2E-05 32.3 4.9 38 84-121 100-137 (143)
9 2b3r_A Phosphatidylinositol-4- 89.4 0.65 2.2E-05 32.4 5.1 38 82-119 86-123 (134)
10 2bwq_A Regulating synaptic mem 89.3 0.55 1.9E-05 31.7 4.5 36 81-116 84-121 (129)
11 2d8k_A Synaptotagmin VII; exoc 89.2 0.61 2.1E-05 32.3 4.8 39 83-121 92-130 (141)
12 3fdw_A Synaptotagmin-like prot 88.2 0.51 1.8E-05 33.0 3.9 37 82-118 90-126 (148)
13 1gmi_A Protein kinase C, epsil 88.1 0.8 2.7E-05 31.7 4.8 33 84-116 77-109 (136)
14 1rh8_A Piccolo protein; beta-s 87.8 0.66 2.3E-05 31.9 4.2 40 82-121 94-133 (142)
15 1ugk_A Synaptotagmin IV, KIAA1 87.6 0.82 2.8E-05 31.5 4.6 40 80-119 86-126 (138)
16 2fk9_A Protein kinase C, ETA t 87.5 0.64 2.2E-05 34.7 4.3 32 84-115 99-130 (157)
17 3rdl_A Protein kinase C alpha 87.3 0.84 2.9E-05 31.0 4.4 32 85-116 84-115 (137)
18 2enp_A B/K protein; C2 type 1, 86.9 0.61 2.1E-05 32.5 3.6 36 84-119 99-134 (147)
19 1rsy_A Synaptotagmin I; calciu 86.8 1.2 4E-05 31.4 5.1 39 83-121 107-145 (152)
20 1a25_A CALB, protein kinase C 85.9 1.1 3.9E-05 31.2 4.6 33 84-116 98-130 (149)
21 3fbk_A RGS3, RGP3, regulator o 85.9 1.2 4.2E-05 31.4 4.8 30 85-114 94-124 (153)
22 2q3x_A Regulating synaptic mem 85.7 1.6 5.5E-05 31.7 5.5 40 80-119 92-132 (171)
23 3b7y_A E3 ubiquitin-protein li 83.7 1.1 3.8E-05 31.3 3.7 35 83-117 85-119 (153)
24 2cjt_A UNC-13 homolog A, MUNC1 83.2 1.1 3.8E-05 31.6 3.6 32 84-116 61-92 (131)
25 2z0u_A WW domain-containing pr 82.7 1.8 6.1E-05 31.5 4.6 32 83-114 111-142 (155)
26 2r83_A Synaptotagmin-1; C2A-C2 82.3 2.3 7.9E-05 32.4 5.3 38 81-118 82-119 (284)
27 2ep6_A MCTP2 protein; beta san 82.3 1.3 4.4E-05 30.3 3.5 31 84-114 73-103 (133)
28 1wfm_A Synaptotagmin XIII; C2 82.2 1.8 6.2E-05 30.1 4.3 38 82-119 88-125 (138)
29 2dmg_A KIAA1228 protein; beta- 81.9 0.9 3.1E-05 31.3 2.7 34 83-116 90-125 (142)
30 2cjs_A UNC-13 homolog A, MUNC1 79.0 2.1 7.2E-05 31.8 4.0 32 84-116 70-101 (167)
31 3m7f_B E3 ubiquitin-protein li 78.4 2.2 7.4E-05 30.8 3.8 37 81-117 71-107 (176)
32 1w15_A Synaptotagmin IV; metal 77.0 3.1 0.00011 29.0 4.2 30 82-111 96-125 (153)
33 2nq3_A Itchy homolog E3 ubiqui 76.9 1.8 6.3E-05 32.0 3.1 33 83-115 94-126 (173)
34 1wfj_A Putative elicitor-respo 76.8 2.6 8.8E-05 28.7 3.6 32 115-146 70-101 (136)
35 3n5a_A Synaptotagmin-7; calciu 75.6 2.4 8.1E-05 28.6 3.2 30 83-112 83-112 (138)
36 3kwu_A MUNC13-1; calcium bindi 72.3 7.9 0.00027 26.6 5.3 30 84-113 77-117 (148)
37 2cm5_A Rabphilin-3A; protein t 71.5 3.5 0.00012 29.3 3.4 32 82-113 103-134 (166)
38 3l9b_A Otoferlin; C2-domain, b 70.9 3.7 0.00012 31.5 3.5 35 114-148 78-112 (144)
39 1tjx_A Similar to synaptotagmi 70.3 4.2 0.00014 28.6 3.5 29 83-111 92-120 (159)
40 3pyc_A E3 ubiquitin-protein li 67.9 2.7 9.2E-05 28.6 2.0 31 86-116 68-101 (132)
41 1gmi_A Protein kinase C, epsil 67.3 4.6 0.00016 27.7 3.2 31 116-146 77-107 (136)
42 3rdl_A Protein kinase C alpha 65.7 11 0.00038 25.3 4.8 31 117-147 84-114 (137)
43 2r83_A Synaptotagmin-1; C2A-C2 63.0 7.3 0.00025 29.6 3.8 30 83-112 217-246 (284)
44 1djx_A PLC-D1, phosphoinositid 62.8 19 0.00065 32.2 7.0 44 80-124 562-605 (624)
45 2bwq_A Regulating synaptic mem 62.1 8.5 0.00029 25.7 3.6 33 114-146 85-119 (129)
46 1a25_A CALB, protein kinase C 59.8 15 0.0005 25.5 4.7 31 116-146 98-128 (149)
47 2fk9_A Protein kinase C, ETA t 57.7 7.9 0.00027 28.7 3.1 31 116-146 99-129 (157)
48 1v27_A Regulating synaptic mem 57.6 9.1 0.00031 25.8 3.2 32 115-146 89-122 (141)
49 2chd_A Rabphilin-3A, exophilin 56.8 8.8 0.0003 26.2 3.0 32 115-146 97-128 (142)
50 1dqv_A Synaptotagmin III; beta 55.2 4 0.00014 31.8 1.1 32 83-114 219-250 (296)
51 3b7y_A E3 ubiquitin-protein li 54.7 15 0.0005 25.4 3.9 31 116-146 86-116 (153)
52 3fdw_A Synaptotagmin-like prot 53.8 11 0.00038 26.0 3.2 31 115-145 91-121 (148)
53 2b3r_A Phosphatidylinositol-4- 52.9 15 0.00052 25.3 3.8 33 114-146 86-118 (134)
54 3k2z_A LEXA repressor; winged 52.6 8.6 0.00029 28.6 2.6 47 3-62 1-47 (196)
55 2cjt_A UNC-13 homolog A, MUNC1 51.5 12 0.00041 26.1 3.1 29 117-146 62-90 (131)
56 2dmh_A Myoferlin; beta-sandwic 51.4 12 0.0004 25.5 2.9 33 114-146 68-100 (140)
57 1ugk_A Synaptotagmin IV, KIAA1 51.3 14 0.00049 25.1 3.4 33 114-146 88-120 (138)
58 1rlw_A Phospholipase A2, CALB 50.1 18 0.00062 23.9 3.7 31 115-146 69-99 (126)
59 3f04_A Synaptotagmin-1; C2A, c 49.8 16 0.00056 24.8 3.5 32 115-146 99-130 (143)
60 2enp_A B/K protein; C2 type 1, 48.8 12 0.0004 25.8 2.7 32 115-146 98-129 (147)
61 2jjs_C Leukocyte surface antig 48.5 8.9 0.0003 28.3 2.1 38 102-145 75-115 (127)
62 1rh8_A Piccolo protein; beta-s 48.5 17 0.00059 24.6 3.4 33 114-146 94-126 (142)
63 2nq3_A Itchy homolog E3 ubiqui 47.9 16 0.00055 26.8 3.4 32 115-146 94-125 (173)
64 2d8k_A Synaptotagmin VII; exoc 46.6 19 0.00065 24.5 3.4 33 114-146 91-123 (141)
65 3fbk_A RGS3, RGP3, regulator o 44.3 24 0.00081 24.6 3.7 30 117-146 94-124 (153)
66 2cjs_A UNC-13 homolog A, MUNC1 44.1 22 0.00074 26.2 3.6 29 117-146 71-99 (167)
67 1dqv_A Synaptotagmin III; beta 42.5 61 0.0021 25.0 6.1 60 83-145 85-165 (296)
68 3n5a_A Synaptotagmin-7; calciu 42.1 23 0.00078 23.6 3.2 30 115-144 83-112 (138)
69 1rsy_A Synaptotagmin I; calciu 42.0 25 0.00086 24.4 3.5 31 115-145 107-137 (152)
70 3m7f_B E3 ubiquitin-protein li 41.1 26 0.0009 25.0 3.6 31 116-146 74-104 (176)
71 2zkm_X 1-phosphatidylinositol- 38.6 36 0.0012 31.6 4.9 39 81-124 742-780 (799)
72 2cm5_A Rabphilin-3A; protein t 38.4 30 0.001 24.3 3.5 30 115-144 104-133 (166)
73 2z0u_A WW domain-containing pr 38.2 22 0.00076 25.5 2.8 31 115-145 111-141 (155)
74 3pyc_A E3 ubiquitin-protein li 37.7 23 0.0008 23.8 2.7 30 117-146 67-99 (132)
75 1w15_A Synaptotagmin IV; metal 37.2 24 0.00082 24.4 2.8 29 115-143 97-125 (153)
76 1tjx_A Similar to synaptotagmi 35.7 34 0.0012 23.8 3.4 29 115-143 92-120 (159)
77 3jzy_A Intersectin 2; C2 domai 34.7 35 0.0012 28.1 3.8 33 84-116 448-480 (510)
78 1wfm_A Synaptotagmin XIII; C2 34.4 28 0.00095 23.9 2.7 31 115-145 89-119 (138)
79 2q3x_A Regulating synaptic mem 34.1 30 0.001 24.8 2.9 31 115-145 95-126 (171)
80 2ep6_A MCTP2 protein; beta san 33.3 13 0.00046 25.1 0.9 31 116-146 73-103 (133)
81 1cjy_A CPLA2, protein (cytosol 32.5 34 0.0012 31.8 3.7 35 81-116 82-116 (749)
82 3fze_A Protein STE5; alpha/bet 29.7 17 0.00058 29.5 1.1 31 101-133 110-141 (196)
83 3pfq_A PKC-B, PKC-beta, protei 26.2 54 0.0018 28.8 3.7 35 85-119 240-274 (674)
84 4gos_A V-SET domain-containing 23.6 58 0.002 21.9 2.8 34 103-142 82-117 (125)
85 3qr0_A Phospholipase C-beta (P 23.6 76 0.0026 29.8 4.4 39 81-124 714-752 (816)
86 4err_A Autotransporter adhesin 23.6 33 0.0011 24.7 1.5 15 15-29 27-41 (90)
87 3ohm_B 1-phosphatidylinositol- 23.4 84 0.0029 29.9 4.6 39 81-124 788-826 (885)
88 3n5w_A Nitric oxide synthase; 21.1 46 0.0016 29.7 2.3 49 11-60 57-106 (422)
89 4b4y_A Neuroglobin; transport 20.7 28 0.00096 24.8 0.7 46 2-47 6-51 (154)
90 3rhi_A DNA-binding protein HU; 20.2 87 0.003 21.0 3.1 25 4-28 18-43 (93)
No 1
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}
Probab=99.87 E-value=2.2e-23 Score=176.93 Aligned_cols=68 Identities=71% Similarity=1.093 Sum_probs=46.0
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhhcCCCccccccccCcchhhHHHHHhhhhhhhHHHHHHHHHhhcc
Q psy12064 2 EKSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKTFVQSQCN 69 (148)
Q Consensus 2 ~k~LtpkQCavld~aldtiK~yFhagg~GlKk~fLeks~~l~slryalsLytqtTd~LIk~fv~tQ~~ 69 (148)
+|++||+||++|+.+|++||+||||||+||++.||||||++++|+|+|+||+++|++||++|++||++
T Consensus 274 ~r~~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~~~~~ 341 (341)
T 3swh_A 274 AKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQTQSA 341 (341)
T ss_dssp -----CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC-----------------
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHhccCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999984
No 2
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=94.21 E-value=0.05 Score=41.89 Aligned_cols=53 Identities=17% Similarity=0.307 Sum_probs=39.7
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEeceeeecCCceeEE
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKDYCFARDDRLVGV 136 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKDyCf~r~dr~vG~ 136 (148)
....|+++||||==-.-||++|-++|+|++++..|++.++ |==.-...+.+|.
T Consensus 78 ~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~--~~LvD~n~~~~~a 130 (144)
T 3l9b_A 78 RNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVS--DTLIDDNNAIIKT 130 (144)
T ss_dssp TTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEE--EEEECTTSCEEEE
T ss_pred CCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEe--ecccCCCCCcccc
Confidence 4558999999996555789999999999999999988865 3223333444553
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.44 E-value=0.47 Score=32.59 Aligned_cols=60 Identities=22% Similarity=0.233 Sum_probs=44.5
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEeceeeecC-C-ceeEEEEEee
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKDYCFARD-D-RLVGVAVLQL 141 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKDyCf~r~-d-r~vG~~vlql 141 (148)
..-+|++.|.|+--.+.|.++|.+.++|.++...+....|++.+..... + ..-|.--+.+
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~ 129 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVI 129 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEE
Confidence 4568999999999888899999999999999888887777765544332 2 2345444443
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=92.42 E-value=0.29 Score=33.56 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=42.3
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceee-eEEeceeeecCCceeEEEEEeeh
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ-ICVKDYCFARDDRLVGVAVLQLK 142 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca-lcVKDyCf~r~dr~vG~~vlql~ 142 (148)
..-+|++.|.|+...+.|.++|-+.++|.++...|+.. .|+. ....++..|---|++.
T Consensus 69 ~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~---L~~~~~~~G~i~l~l~ 127 (136)
T 1wfj_A 69 GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYN---VVKDEEYKGEIWVALS 127 (136)
T ss_dssp SCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEE---EEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEE---eecCCccCEEEEEEEE
Confidence 34589999999998888999999999999997766422 2222 2256677776666553
No 5
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=91.28 E-value=0.51 Score=31.76 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=39.3
Q ss_pred CCCceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEeceeeecCCceeEEEEEeeh
Q psy12064 80 QLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKDYCFARDDRLVGVAVLQLK 142 (148)
Q Consensus 80 ~p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKDyCf~r~dr~vG~~vlql~ 142 (148)
.|+.-.|++.|.|+-..+ |.++|-+.++|.++........ +|--.++--|..-++|.
T Consensus 66 ~~~~~~l~i~V~d~d~~~-~~~iG~~~i~l~~l~~~~~~~~-----~~~L~~~~~g~i~~~le 122 (126)
T 1rlw_A 66 PNQENVLEITLMDANYVM-DETLGTATFTVSSMKVGEKKEV-----PFIFNQVTEMVLEMSLE 122 (126)
T ss_dssp TTSCCEEEEEEEECCSSC-CEEEEEEEEEGGGSCTTCEEEE-----EEEETTTEEEEEEEEEE
T ss_pred CCCCCEEEEEEEECCCCC-CceeEEEEEEHHHccCCCcEEE-----EEEcCCCceEEEEEEEE
Confidence 345568999999998776 8899999999999976554443 44444444444444443
No 6
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=90.77 E-value=0.38 Score=33.28 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=30.2
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccceee
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
-.|++.|.|+-..+.|..+|-+.++|.++.....-.
T Consensus 98 ~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~ 133 (142)
T 2chd_A 98 KTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKN 133 (142)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEE
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccE
Confidence 479999999988888889999999999997766544
No 7
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=89.61 E-value=0.5 Score=32.30 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=30.7
Q ss_pred CCceEEEeeeeceeeccC--Ceeeeeeeeeccchhccc
Q psy12064 81 LEFFELHICVKDYCFARD--DRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~--Dr~vG~av~qL~~iAeKG 116 (148)
+..-.|++.|.|+--.+. |.++|-+.++|.++...+
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~ 124 (141)
T 1v27_A 87 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD 124 (141)
T ss_dssp GGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS
T ss_pred hcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC
Confidence 344689999999998776 999999999999997765
No 8
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=89.56 E-value=0.59 Score=32.31 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=30.3
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeE
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQIC 121 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalc 121 (148)
-.|++.|.|+-..+.|.++|-+.++|.++........|
T Consensus 100 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W 137 (143)
T 3f04_A 100 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEW 137 (143)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEE
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceE
Confidence 57889999998888888999999999998765555433
No 9
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=89.41 E-value=0.65 Score=32.35 Aligned_cols=38 Identities=24% Similarity=0.188 Sum_probs=30.8
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceee
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
..-.|++.|.|+--.+.|.++|-+.++|.++.......
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~ 123 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETV 123 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEE
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcc
Confidence 34589999999988888889999999999997655444
No 10
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=89.27 E-value=0.55 Score=31.70 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCceEEEeeeeceeeccC--Ceeeeeeeeeccchhccc
Q psy12064 81 LEFFELHICVKDYCFARD--DRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~--Dr~vG~av~qL~~iAeKG 116 (148)
+..-.|++.|.|+--.+. |..+|-+.++|.++...+
T Consensus 84 ~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~ 121 (129)
T 2bwq_A 84 FRERMLEITLWDQARVREEESEFLGEILIELETALLDD 121 (129)
T ss_dssp GGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS
T ss_pred hcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc
Confidence 445689999999987765 899999999999987765
No 11
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.15 E-value=0.61 Score=32.29 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=31.6
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeE
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQIC 121 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalc 121 (148)
.-.|++.|.||--.+.|.++|-+.++|.++........|
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W 130 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFW 130 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEE
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEE
Confidence 457999999998888889999999999999776544433
No 12
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=88.21 E-value=0.51 Score=33.03 Aligned_cols=37 Identities=16% Similarity=0.040 Sum_probs=30.6
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhcccee
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKH 118 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSc 118 (148)
..-.|++.|.||-..+.|.++|-+.++|.++......
T Consensus 90 ~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~ 126 (148)
T 3fdw_A 90 AQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKL 126 (148)
T ss_dssp GGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCS
T ss_pred CceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCc
Confidence 3456999999999988999999999999999655433
No 13
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=88.09 E-value=0.8 Score=31.67 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=29.1
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
-+|++.|.|+.-...|.++|-+.++|.++...+
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~ 109 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNG 109 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTT
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccC
Confidence 579999999997777889999999999998754
No 14
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=87.84 E-value=0.66 Score=31.92 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=32.3
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeE
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQIC 121 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalc 121 (148)
..-.|++.|.|+--.+.|..+|-+.++|.++........|
T Consensus 94 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W 133 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRW 133 (142)
T ss_dssp TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEE
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeE
Confidence 4558999999999888889999999999998765444433
No 15
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=87.62 E-value=0.82 Score=31.49 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=32.0
Q ss_pred CCCceEEEeeeeceeeccCCeeeeeeeeeccchhc-cceee
Q psy12064 80 QLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVE-QVKHQ 119 (148)
Q Consensus 80 ~p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAe-KGSca 119 (148)
++..-.|++.|.||--.+.|.++|-+.++|.++.. .+..+
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~ 126 (138)
T 1ugk_A 86 QIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKML 126 (138)
T ss_dssp TGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEE
T ss_pred HhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcch
Confidence 34456899999999988888899999999999965 35554
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=87.52 E-value=0.64 Score=34.70 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=27.8
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhcc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeK 115 (148)
-+|.+.|+|+.-...|.++|-+.|+|.++...
T Consensus 99 ~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~ 130 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHFVANCTLQFQELLRT 130 (157)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhhcc
Confidence 37899999998777788999999999999865
No 17
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=87.33 E-value=0.84 Score=31.00 Aligned_cols=32 Identities=9% Similarity=0.249 Sum_probs=27.6
Q ss_pred EEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 85 ELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 85 EL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
.|++.|.|+--.+.|.++|.+.++|.++...+
T Consensus 84 ~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~ 115 (137)
T 3rdl_A 84 RLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP 115 (137)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeHHHhccCc
Confidence 68899999887777889999999999998766
No 18
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.93 E-value=0.61 Score=32.51 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=29.7
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccceee
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
-.|++.|.||--.+.|.++|-+.++|.++.......
T Consensus 99 ~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~ 134 (147)
T 2enp_A 99 RTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGH 134 (147)
T ss_dssp SEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCC
T ss_pred CEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCcc
Confidence 479999999987777889999999999997655433
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=86.80 E-value=1.2 Score=31.38 Aligned_cols=39 Identities=10% Similarity=0.005 Sum_probs=30.4
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeE
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQIC 121 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalc 121 (148)
.-.|++.|.||--.+.|.++|-+.++|.++.......-|
T Consensus 107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W 145 (152)
T 1rsy_A 107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEW 145 (152)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEE
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceE
Confidence 457999999998888889999999999998654444433
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=85.89 E-value=1.1 Score=31.24 Aligned_cols=33 Identities=9% Similarity=0.233 Sum_probs=28.1
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
-.|++.|.|+--.+.|.++|-+.++|.++....
T Consensus 98 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~ 130 (149)
T 1a25_A 98 RRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG 130 (149)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc
Confidence 369999999988888889999999999987653
No 21
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=85.86 E-value=1.2 Score=31.44 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=26.1
Q ss_pred EEEeeeeceeec-cCCeeeeeeeeeccchhc
Q psy12064 85 ELHICVKDYCFA-RDDRLVGVAVLQLKDIVE 114 (148)
Q Consensus 85 EL~~~VKDYCFa-r~Dr~vG~av~qL~~iAe 114 (148)
.|++.|.|+-.. +.|..+|-+.++|.++..
T Consensus 94 ~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 94 RLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp EEEEEEEECCSSGGGCEEEEEEEEEHHHHTC
T ss_pred EEEEEEEeCCCCCCCCcEEEEEEEEHHHhcC
Confidence 399999999874 559999999999999986
No 22
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=85.69 E-value=1.6 Score=31.65 Aligned_cols=40 Identities=20% Similarity=0.135 Sum_probs=33.0
Q ss_pred CCCceEEEeeee-ceeeccCCeeeeeeeeeccchhccceee
Q psy12064 80 QLEFFELHICVK-DYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 80 ~p~~yEL~~~VK-DYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
.+..-.|++.|. ||-..+.|.++|-+.++|.++.......
T Consensus 92 ~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~ 132 (171)
T 2q3x_A 92 SPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVI 132 (171)
T ss_dssp CCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEE
T ss_pred cCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcc
Confidence 355678999999 9998888999999999999997544443
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=83.66 E-value=1.1 Score=31.27 Aligned_cols=35 Identities=17% Similarity=0.062 Sum_probs=30.5
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhccce
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVK 117 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGS 117 (148)
.-.|++.|.|+--.+.|..+|.+.++|.++.....
T Consensus 85 ~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~ 119 (153)
T 3b7y_A 85 QHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENP 119 (153)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCT
T ss_pred CCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCC
Confidence 45799999999988889999999999999977653
No 24
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=83.21 E-value=1.1 Score=31.57 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=27.5
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
-+|++.|.|+= ...|..+|-+.++|.+|...+
T Consensus 61 ~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 61 LGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp SEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCS
T ss_pred CeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcC
Confidence 36999999999 556889999999999997665
No 25
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=82.71 E-value=1.8 Score=31.45 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=27.4
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhc
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVE 114 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAe 114 (148)
.-.|++.|.||--.+.|.++|-+.++|.++..
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~ 142 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLAEVCR 142 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECTTSCT
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHHHccC
Confidence 44799999999877778899999999999853
No 26
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=82.31 E-value=2.3 Score=32.42 Aligned_cols=38 Identities=13% Similarity=0.057 Sum_probs=31.1
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhcccee
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKH 118 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSc 118 (148)
...-.|++.|.|+--.+.|.++|-+.++|.++......
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~ 119 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVT 119 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCE
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcc
Confidence 34568999999999888899999999999998654433
No 27
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=82.31 E-value=1.3 Score=30.31 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=28.2
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVE 114 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAe 114 (148)
-.|++.|.|+--.+.|..+|-+.++|.++.+
T Consensus 73 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 73 DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRD 103 (133)
T ss_dssp CEEEEEEEEEETTEEEEECCBCEEEGGGCCS
T ss_pred CEEEEEEEECCCCCCCCeeEEEEEEHHHccC
Confidence 3699999999998889999999999999965
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=82.17 E-value=1.8 Score=30.10 Aligned_cols=38 Identities=11% Similarity=0.028 Sum_probs=30.0
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchhccceee
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
..-.|++.|.||--...|.++|-+.++|.++.......
T Consensus 88 ~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~ 125 (138)
T 1wfm_A 88 PTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAA 125 (138)
T ss_dssp TTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEcccccCccccc
Confidence 45689999999987777889999999999985333333
No 29
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.94 E-value=0.9 Score=31.33 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=26.2
Q ss_pred ceEEEeeeecee-ecc-CCeeeeeeeeeccchhccc
Q psy12064 83 FFELHICVKDYC-FAR-DDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 83 ~yEL~~~VKDYC-Far-~Dr~vG~av~qL~~iAeKG 116 (148)
.-.|++.|.|+- |.+ +|.++|-+.++|.++....
T Consensus 90 ~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~ 125 (142)
T 2dmg_A 90 RRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK 125 (142)
T ss_dssp HCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT
T ss_pred cCEEEEEEEECCCccccCCcEEEEEEEecccccccc
Confidence 347999999998 444 5679999999999886543
No 30
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=79.01 E-value=2.1 Score=31.77 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=27.6
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
-+|++.|.|+= ...|.++|-+.++|.++...+
T Consensus 70 ~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 70 LGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp SEEEEEEEECC-SSCCEEEEEEEEEGGGSCBCS
T ss_pred CEEEEEEEECC-CCCCceEEEEEEEHHHhcccC
Confidence 36999999999 556889999999999997665
No 31
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=78.39 E-value=2.2 Score=30.81 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=27.1
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhccce
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVK 117 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGS 117 (148)
+..-.|++.|.|+--...|.++|.+.++|.++...+.
T Consensus 71 ~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~ 107 (176)
T 3m7f_B 71 PQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENP 107 (176)
T ss_dssp TTTCEEEEEEEECC----CEEEEEEEEESCSCCBC--
T ss_pred CCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCC
Confidence 3446899999999888788999999999999987653
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=77.00 E-value=3.1 Score=29.01 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=25.9
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccc
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKD 111 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~ 111 (148)
..-.|++.|.||-..+.|.++|-+.++|.+
T Consensus 96 ~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 96 EEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred CceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 346899999999988888899999999987
No 33
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=76.92 E-value=1.8 Score=32.01 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=29.4
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhcc
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVEQ 115 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeK 115 (148)
.-+|.+.|.||--.+.|.++|.+.++|.++.+.
T Consensus 94 ~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~ 126 (173)
T 2nq3_A 94 VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKS 126 (173)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCceEEEEEEEHHHhccc
Confidence 557999999999888999999999999999753
No 34
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=76.75 E-value=2.6 Score=28.66 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=27.8
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.|+.....|..+|.+.++|.++..
T Consensus 70 ~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~ 101 (136)
T 1wfj_A 70 TTELKAKIFDKDVGTEDDAVGEATIPLEPVFV 101 (136)
T ss_dssp CCEEEEEECCSSSCTTTCCSEEEEEESHHHHH
T ss_pred CCEEEEEEEECCCCCCCceEEEEEEEHHHhcc
Confidence 45788899999988889999999999999854
No 35
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=75.64 E-value=2.4 Score=28.62 Aligned_cols=30 Identities=20% Similarity=0.078 Sum_probs=26.6
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccch
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDI 112 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~i 112 (148)
.-.|++.|.|+-..+.|..+|-+.++|.++
T Consensus 83 ~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 83 ETTIIITVMDKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp GEEEEEEEEECCSSSCCEEEEEEEESSSSC
T ss_pred ceEEEEEEEECCCCCCCcEEEEEEEccccC
Confidence 467999999999888899999999999864
No 36
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=72.28 E-value=7.9 Score=26.64 Aligned_cols=30 Identities=13% Similarity=0.270 Sum_probs=26.1
Q ss_pred eEEEeeeeceeec-----------cCCeeeeeeeeeccchh
Q psy12064 84 FELHICVKDYCFA-----------RDDRLVGVAVLQLKDIV 113 (148)
Q Consensus 84 yEL~~~VKDYCFa-----------r~Dr~vG~av~qL~~iA 113 (148)
-+|++.|-|+--. +.|..+|-+.++|.++.
T Consensus 77 ~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~ 117 (148)
T 3kwu_A 77 DRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS 117 (148)
T ss_dssp CEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC
T ss_pred CEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc
Confidence 4689999999864 78999999999999993
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=71.47 E-value=3.5 Score=29.29 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=27.8
Q ss_pred CceEEEeeeeceeeccCCeeeeeeeeeccchh
Q psy12064 82 EFFELHICVKDYCFARDDRLVGVAVLQLKDIV 113 (148)
Q Consensus 82 ~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iA 113 (148)
..-.|++.|.|+--.+.|.++|-+.++|.++.
T Consensus 103 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 103 AKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred CCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 35689999999998888999999999998853
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=70.88 E-value=3.7 Score=31.46 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=29.0
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhhcC
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVEQK 148 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~~~ 148 (148)
..-.+.++||||==..-+|++|-++|.|++++..|
T Consensus 78 ~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~ 112 (144)
T 3l9b_A 78 RNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEEN 112 (144)
T ss_dssp TTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHS
T ss_pred CCCEEEEEEEECccccCCCEEEEEEEEhHHhccCC
Confidence 34578999999966667899999999999997643
No 39
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=70.26 E-value=4.2 Score=28.62 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=26.1
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccc
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKD 111 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~ 111 (148)
.-.|++.|.|+.-.+.|.++|-+.++|..
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 92 KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 45799999999988889999999999985
No 40
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=67.92 E-value=2.7 Score=28.62 Aligned_cols=31 Identities=16% Similarity=0.097 Sum_probs=24.9
Q ss_pred EEeeeeceeeccC---Ceeeeeeeeeccchhccc
Q psy12064 86 LHICVKDYCFARD---DRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 86 L~~~VKDYCFar~---Dr~vG~av~qL~~iAeKG 116 (148)
|++.|.|+=-.+. |..+|.+.++|.+|.+.+
T Consensus 68 l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~ 101 (132)
T 3pyc_A 68 ITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLK 101 (132)
T ss_dssp EEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHT
T ss_pred EEEEEEECCCCCCCCCCCceEEEEEeHHHhhccc
Confidence 8899999875543 789999999999985443
No 41
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=67.28 E-value=4.6 Score=27.75 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=27.1
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|.|+.-...|..+|.+.++|.++..
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTS
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcc
Confidence 5688899999877778899999999999875
No 42
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=65.70 E-value=11 Score=25.25 Aligned_cols=31 Identities=6% Similarity=0.242 Sum_probs=26.8
Q ss_pred eeeeEEeceeeecCCceeEEEEEeehhhhhc
Q psy12064 117 KHQICVKDYCFARDDRLVGVAVLQLKDIVEQ 147 (148)
Q Consensus 117 ScalcVKDyCf~r~dr~vG~~vlql~~i~~~ 147 (148)
.+.+.|.|+--...|..+|.+.+.|.++...
T Consensus 84 ~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~ 114 (137)
T 3rdl_A 84 RLSVEIWDWDRTTRNDFMGSLSFGVSELMKM 114 (137)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEHHHHHHS
T ss_pred EEEEEEEECCCCCCCceEEEEEEeHHHhccC
Confidence 6788899988777889999999999998754
No 43
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=62.96 E-value=7.3 Score=29.61 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=25.0
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccch
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDI 112 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~i 112 (148)
.-.|++.|.||-..+.|.++|-+.++|..+
T Consensus 217 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 217 KVQVVVTVLDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp GEEEEEEEEECCSSSCCCEEEEEEEETTCC
T ss_pred ceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 457889999998888888999999998764
No 44
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=62.76 E-value=19 Score=32.22 Aligned_cols=44 Identities=9% Similarity=0.217 Sum_probs=33.4
Q ss_pred CCCceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEec
Q psy12064 80 QLEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKD 124 (148)
Q Consensus 80 ~p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKD 124 (148)
.|+.-.|.+.|+|+-....|.++|-++++|..|.. |.-++..+|
T Consensus 562 ~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~-G~r~v~L~d 605 (624)
T 1djx_A 562 VPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQ-GYRHVHLLS 605 (624)
T ss_dssp CGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCC-EEEEEEEEC
T ss_pred cCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCC-CcEEEeCCC
Confidence 34444689999999988889999999999999854 544444444
No 45
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=62.07 E-value=8.5 Score=25.68 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=24.1
Q ss_pred ccceeeeEEeceeeecC--CceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARD--DRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~--dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.|+--... |..+|.+.++|.++..
T Consensus 85 ~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 85 RERMLEITLWDQARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp GGCEEEEEEEEC-------CEEEEEEEEEGGGCCC
T ss_pred cCCeEEEEEEECCcCcCcCCceeEEEEEEccccCC
Confidence 34588999999987776 8999999999998864
No 46
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=59.82 E-value=15 Score=25.45 Aligned_cols=31 Identities=6% Similarity=0.264 Sum_probs=27.3
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|.|+--...|..+|.+.+.|.++..
T Consensus 98 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 98 RRLSVEIWDWDLTSRNDFMGSLSFGISELQK 128 (149)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHTT
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhCc
Confidence 4688999999888889999999999999865
No 47
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=57.70 E-value=7.9 Score=28.68 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=27.0
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|+|+.-...|..+|.+.|+|.++.+
T Consensus 99 ~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~ 129 (157)
T 2fk9_A 99 GHLELAVFHETPLGYDHFVANCTLQFQELLR 129 (157)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHHH
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEEHHHhhc
Confidence 4788999999877788899999999999874
No 48
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=57.63 E-value=9.1 Score=25.85 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=27.3
Q ss_pred cceeeeEEeceeeecC--CceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARD--DRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~--dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.|+--... |..+|.+.++|.++..
T Consensus 89 ~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~ 122 (141)
T 1v27_A 89 ERMLEITLWDQARVREEESEFLGEILIELETALL 122 (141)
T ss_dssp TCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCC
T ss_pred CCEEEEEEEECCCCcCCCCceEEEEEEEccccCC
Confidence 4678999999988776 8999999999998754
No 49
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=56.83 E-value=8.8 Score=26.22 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=27.9
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.|+--.+.|..+|-+.++|.++..
T Consensus 97 ~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~ 128 (142)
T 2chd_A 97 RKTLRISVCDEDKFGHNEFIGETRFSLKKLKA 128 (142)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEEGGGCCT
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEHHHcCC
Confidence 35899999999888888999999999998864
No 50
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=55.20 E-value=4 Score=31.85 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=27.4
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeeeccchhc
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQLKDIVE 114 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAe 114 (148)
.-.|++.|.||...+.|.++|.+.++|.++..
T Consensus 219 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 219 NVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp SCCCCCEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred CcEEEEEEEeCCCCCCCceEEEEEECCccCCc
Confidence 44699999999988899999999999987754
No 51
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=54.69 E-value=15 Score=25.40 Aligned_cols=31 Identities=16% Similarity=0.054 Sum_probs=26.9
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|.|+--...|..+|.+.++|.++..
T Consensus 86 ~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~ 116 (153)
T 3b7y_A 86 HRLLFEVFDENRLTRDDFLGQVDVPLYPLPT 116 (153)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEECCSCCB
T ss_pred CEEEEEEEECCCCcCCCeeEEEEEEHHHccc
Confidence 4788899999888889999999999998854
No 52
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=53.82 E-value=11 Score=26.04 Aligned_cols=31 Identities=19% Similarity=0.097 Sum_probs=27.5
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~ 145 (148)
...+.+.|.||-..+.|..+|.+.++|.++.
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHHHHH
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEccccc
Confidence 4568999999998889999999999999885
No 53
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=52.90 E-value=15 Score=25.25 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=28.2
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.||--.+.|..+|.+.++|.++..
T Consensus 86 ~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 86 RQRELQLSVLSAESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCT
T ss_pred CcCEEEEEEEECCCCCCCcEEEEEEEEhhhccC
Confidence 346889999999888888999999999998854
No 54
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=52.64 E-value=8.6 Score=28.58 Aligned_cols=47 Identities=13% Similarity=0.144 Sum_probs=30.9
Q ss_pred CCCCchhhHHHHHHHHHHHHhhhhcCCCccccccccCcchhhHHHHHhhhhhhhHHHHHH
Q psy12064 3 KSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRYALSLYTQTTDALIKT 62 (148)
Q Consensus 3 k~LtpkQCavld~aldtiK~yFhagg~GlKk~fLeks~~l~slryalsLytqtTd~LIk~ 62 (148)
++||+||-.|||.+++.+++ .|. .|-...|--++.|=..|.-..+++
T Consensus 1 ~~lt~~q~~il~~I~~~~~~----~g~---------~~s~~eia~~lgl~~~tv~~~l~~ 47 (196)
T 3k2z_A 1 MDLTERQRKVLLFIEEFIEK----NGY---------PPSVREIARRFRITPRGALLHLIA 47 (196)
T ss_dssp -CCCHHHHHHHHHHHHHHHH----HSS---------CCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHH----hCC---------CCCHHHHHHHcCCCcHHHHHHHHH
Confidence 47999999998777666554 232 256667777777766655555555
No 55
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=51.50 E-value=12 Score=26.15 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=24.4
Q ss_pred eeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 117 KHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 117 ScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
.+.+.|.|+= ...|..+|-+.++|.+|..
T Consensus 62 ~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 62 GLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp EEEEEEEECC-SSCEEEEEEEEEEGGGSCB
T ss_pred eEEEEEEECC-CCCCCeEEEEEEEHHHhhh
Confidence 5788888888 5668899999999999854
No 56
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.43 E-value=12 Score=25.46 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=27.9
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.|+--...|..+|.+.+.|.++..
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 100 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDLTG 100 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCS
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcc
Confidence 356788889999888888999999999998854
No 57
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=51.28 E-value=14 Score=25.07 Aligned_cols=33 Identities=12% Similarity=0.254 Sum_probs=28.1
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.||--...|..+|.+.++|.++..
T Consensus 88 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 88 QELALHFTILSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp GGCEEEEEEEEECSSCCCCCCEEEEEECTTCCC
T ss_pred ccCEEEEEEEECCCCCCCcEEEEEEEehhHccC
Confidence 346889999999888888899999999998853
No 58
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=50.13 E-value=18 Score=23.90 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=25.4
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.|+-..+ |..+|.+.++|.++..
T Consensus 69 ~~~l~i~V~d~d~~~-~~~iG~~~i~l~~l~~ 99 (126)
T 1rlw_A 69 ENVLEITLMDANYVM-DETLGTATFTVSSMKV 99 (126)
T ss_dssp CCEEEEEEEECCSSC-CEEEEEEEEEGGGSCT
T ss_pred CCEEEEEEEECCCCC-CceeEEEEEEHHHccC
Confidence 356888898988775 8899999999998754
No 59
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=49.80 E-value=16 Score=24.84 Aligned_cols=32 Identities=9% Similarity=0.084 Sum_probs=27.7
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.|+-....|..+|.+.++|.++..
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~ 130 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDF 130 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCCT
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHccC
Confidence 36788999999888889999999999998753
No 60
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.82 E-value=12 Score=25.81 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=27.1
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.||--...|..+|-+.++|.++..
T Consensus 98 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~ 129 (147)
T 2enp_A 98 RRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDL 129 (147)
T ss_dssp HSEEEEEEECCSTTCCSCCCEEEEEETTTSCT
T ss_pred cCEEEEEEEECCCCcCCcEEEEEEEechhcCC
Confidence 35899999999877778899999999998743
No 61
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=48.54 E-value=8.9 Score=28.27 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=32.4
Q ss_pred eeeeeeeccch-h--ccceeeeEEeceeeecCCceeEEEEEeehhhh
Q psy12064 102 VGVAVLQLKDI-V--EQVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 102 vG~av~qL~~i-A--eKGScalcVKDyCf~r~dr~vG~~vlql~~i~ 145 (148)
-|-++|+|..+ + +.|++. |++..+--.|-+.+.|+..+
T Consensus 75 ~GnaSL~i~~v~~~sD~G~Yt------C~v~~~~~~~~~~i~Lkv~~ 115 (127)
T 2jjs_C 75 KGDASLKMDKSDAVSHTGNYT------CEVTELTREGETIIELKYRV 115 (127)
T ss_dssp GTBCCEEEEHHHHHTSCEEEE------EEEEETTEEEEEEEEEEECC
T ss_pred cCcEEEEEcccccccCCcEEE------EEEEeCCceEEEEEEEEEEe
Confidence 46699999988 3 479999 99999999999999998654
No 62
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=48.48 E-value=17 Score=24.64 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=28.4
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.|+--...|..+|.+.++|.++..
T Consensus 94 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 126 (142)
T 1rh8_A 94 MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSH 126 (142)
T ss_dssp TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGG
T ss_pred cCCEEEEEEEECCCCCCCceEEEEEEecccccc
Confidence 356899999999988888999999999998754
No 63
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=47.95 E-value=16 Score=26.82 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=28.3
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
...+.+.|.||--.+.|..+|.+.+.|.++.+
T Consensus 94 ~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~ 125 (173)
T 2nq3_A 94 VSKLHFRVWSHQTLKSDVLLGTAALDIYETLK 125 (173)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHH
T ss_pred CCEEEEEEEECCCCCCCceEEEEEEEHHHhcc
Confidence 56788999999988889999999999999864
No 64
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.64 E-value=19 Score=24.55 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=28.0
Q ss_pred ccceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 114 EQVKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 114 eKGScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
....+.+.|.||--...|..+|.+.++|.++..
T Consensus 91 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~ 123 (141)
T 2d8k_A 91 VQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDL 123 (141)
T ss_dssp TTSEEEEEEEECCSSSSCEEEEEEEEETTTSCT
T ss_pred ccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcC
Confidence 346789999999887888999999999998754
No 65
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=44.30 E-value=24 Score=24.64 Aligned_cols=30 Identities=13% Similarity=0.255 Sum_probs=25.4
Q ss_pred eeeeEEeceeeec-CCceeEEEEEeehhhhh
Q psy12064 117 KHQICVKDYCFAR-DDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 117 ScalcVKDyCf~r-~dr~vG~~vlql~~i~~ 146 (148)
.+.+.|.|+-... .|..+|-+.++|.++.+
T Consensus 94 ~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 94 RLLVTVWNRASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp EEEEEEEECCSSGGGCEEEEEEEEEHHHHTC
T ss_pred EEEEEEEeCCCCCCCCcEEEEEEEEHHHhcC
Confidence 4889999998754 48999999999999874
No 66
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=44.10 E-value=22 Score=26.20 Aligned_cols=29 Identities=21% Similarity=0.164 Sum_probs=24.3
Q ss_pred eeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 117 KHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 117 ScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
.+.+.|.|+= ...|..+|-+.++|.+|..
T Consensus 71 ~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 71 GLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEECC-SSCCEEEEEEEEEGGGSCB
T ss_pred EEEEEEEECC-CCCCceEEEEEEEHHHhcc
Confidence 5788888888 5568899999999999854
No 67
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=42.52 E-value=61 Score=25.03 Aligned_cols=60 Identities=22% Similarity=0.388 Sum_probs=39.0
Q ss_pred ceEEEeeeeceeeccCCeeeeeeeee-ccchhc--------------------cceeeeEEeceeeecCCceeEEEEEee
Q psy12064 83 FFELHICVKDYCFARDDRLVGVAVLQ-LKDIVE--------------------QVKHQICVKDYCFARDDRLVGVAVLQL 141 (148)
Q Consensus 83 ~yEL~~~VKDYCFar~Dr~vG~av~q-L~~iAe--------------------KGScalcVKDyCf~r~dr~vG~~vlql 141 (148)
.-.|++.|.|+--.+.|.++|-+.++ |.++.+ .|++.+.+ ++.+....+=+.|++-
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl---~y~~~~~~l~v~v~~a 161 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSL---CYLPTAGLLTVTIIKA 161 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEE---EEETTTTEEEEEEEEE
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEE---EeccccceeEEEEEEe
Confidence 35799999999887888899999985 434332 24444432 3444445566677766
Q ss_pred hhhh
Q psy12064 142 KDIV 145 (148)
Q Consensus 142 ~~i~ 145 (148)
+++.
T Consensus 162 ~~L~ 165 (296)
T 1dqv_A 162 SNLK 165 (296)
T ss_dssp ESCC
T ss_pred ecCC
Confidence 6653
No 68
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=42.05 E-value=23 Score=23.62 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=26.3
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDI 144 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i 144 (148)
...+.+.|.|+-..+.|..+|.+.+.|.++
T Consensus 83 ~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 83 ETTIIITVMDKDKLSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp GEEEEEEEEECCSSSCCEEEEEEEESSSSC
T ss_pred ceEEEEEEEECCCCCCCcEEEEEEEccccC
Confidence 467899999999888899999999999864
No 69
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=41.97 E-value=25 Score=24.39 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=27.3
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~ 145 (148)
...+.+.|.||--...|..+|-+.+.|.++.
T Consensus 107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~ 137 (152)
T 1rsy_A 107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVD 137 (152)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEchhcc
Confidence 4678999999988888999999999999874
No 70
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=41.11 E-value=26 Score=24.98 Aligned_cols=31 Identities=16% Similarity=0.051 Sum_probs=23.2
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|.|+--...|..+|.+.++|.++..
T Consensus 74 ~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~ 104 (176)
T 3m7f_B 74 HRILFEVFDENRLTRDDFLGQVDVPLYPLPT 104 (176)
T ss_dssp CEEEEEEEECC----CEEEEEEEEESCSCCB
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHccc
Confidence 4678889898877788999999999998864
No 71
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=38.64 E-value=36 Score=31.57 Aligned_cols=39 Identities=15% Similarity=0.454 Sum_probs=29.6
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEec
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKD 124 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKD 124 (148)
|+--.|.+.|+|| +|..+|-++++|..+. .|.-++...|
T Consensus 742 ~el~~Lr~~V~D~----d~d~iG~~~ipl~~L~-~G~r~v~L~~ 780 (799)
T 2zkm_X 742 PELASLRVAVMEE----GNKFLGHRIIPINALN-SGYHHLCLHS 780 (799)
T ss_dssp GGGCEEEEEEEET----TTEEEEEEEEEGGGBC-CEEEEEEEEC
T ss_pred CCccEEEEEEEEe----CCCccceEeeehhhcC-CCcEEEeccC
Confidence 3333678999998 5899999999999984 5666666655
No 72
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=38.41 E-value=30 Score=24.32 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=26.7
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDI 144 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i 144 (148)
...+.+.|.||--.+.|..+|.+.+.|.++
T Consensus 104 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 104 KKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 568999999999888899999999999875
No 73
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=38.17 E-value=22 Score=25.54 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=27.2
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~ 145 (148)
...+.+.|.||--.+.|..+|.+.+.|.++.
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECTTSC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHHHcc
Confidence 4589999999987778889999999999874
No 74
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=37.72 E-value=23 Score=23.81 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=23.5
Q ss_pred eeeeEEeceeeecC---CceeEEEEEeehhhhh
Q psy12064 117 KHQICVKDYCFARD---DRLVGVAVLQLKDIVE 146 (148)
Q Consensus 117 ScalcVKDyCf~r~---dr~vG~~vlql~~i~~ 146 (148)
++.+.|.|+=-... |..+|.+.++|.+|.+
T Consensus 67 ~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~ 99 (132)
T 3pyc_A 67 SITISVWNHKKIHKKQGAGFLGCVRLLSNAISR 99 (132)
T ss_dssp CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhc
Confidence 47888888865543 7899999999998843
No 75
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=37.16 E-value=24 Score=24.37 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=25.7
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKD 143 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~ 143 (148)
...+.+.|.||-..+.|..+|.+.++|.+
T Consensus 97 ~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 97 EISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 46799999999988888999999999876
No 76
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=35.67 E-value=34 Score=23.79 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=25.7
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKD 143 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~ 143 (148)
...+.+.|.|+.-...|..+|-+.|.|..
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 92 KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 45799999999988889999999999984
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=34.66 E-value=35 Score=28.10 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=26.3
Q ss_pred eEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 84 FELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 84 yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
-.|.+.|-|+--.+.|..+|-+.++|.++...+
T Consensus 448 ~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~ 480 (510)
T 3jzy_A 448 DVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQ 480 (510)
T ss_dssp CEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHH
T ss_pred CEEEEEEEeCCCCCCCCceEEEEEEHHHhcccc
Confidence 347888888887777888999999999887643
No 78
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=34.40 E-value=28 Score=23.92 Aligned_cols=31 Identities=10% Similarity=0.056 Sum_probs=26.5
Q ss_pred cceeeeEEeceeeecCCceeEEEEEeehhhh
Q psy12064 115 QVKHQICVKDYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 115 KGScalcVKDyCf~r~dr~vG~~vlql~~i~ 145 (148)
...+.+.|.||--...|..+|-+.++|.++.
T Consensus 89 ~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 89 TATLTLTLRTCDRFSRHSVAGELRLGLDGTS 119 (138)
T ss_dssp TCEEEEEEEECCSSCTTSCSEEEEEESSSSS
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEccccc
Confidence 4578999999987777889999999999873
No 79
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=34.10 E-value=30 Score=24.81 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=27.1
Q ss_pred cceeeeEEe-ceeeecCCceeEEEEEeehhhh
Q psy12064 115 QVKHQICVK-DYCFARDDRLVGVAVLQLKDIV 145 (148)
Q Consensus 115 KGScalcVK-DyCf~r~dr~vG~~vlql~~i~ 145 (148)
...+.+.|. ||-....|..+|.+.+.|.++.
T Consensus 95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~ 126 (171)
T 2q3x_A 95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELD 126 (171)
T ss_dssp TEEEEEEEEEECSTTCSSEEEEEEEECGGGSC
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcc
Confidence 467888999 9988888899999999999875
No 80
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=33.30 E-value=13 Score=25.09 Aligned_cols=31 Identities=16% Similarity=0.118 Sum_probs=26.2
Q ss_pred ceeeeEEeceeeecCCceeEEEEEeehhhhh
Q psy12064 116 VKHQICVKDYCFARDDRLVGVAVLQLKDIVE 146 (148)
Q Consensus 116 GScalcVKDyCf~r~dr~vG~~vlql~~i~~ 146 (148)
..+.+.|.|+--.+.|..+|.+.+.|.++.+
T Consensus 73 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 103 (133)
T 2ep6_A 73 DVLEVTVFDEDGDKPPDFLGKVAIPLLSIRD 103 (133)
T ss_dssp CEEEEEEEEEETTEEEEECCBCEEEGGGCCS
T ss_pred CEEEEEEEECCCCCCCCeeEEEEEEHHHccC
Confidence 4688889999888788999999999998753
No 81
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=32.53 E-value=34 Score=31.80 Aligned_cols=35 Identities=17% Similarity=0.167 Sum_probs=29.4
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhccc
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQV 116 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKG 116 (148)
|..-.|++.|.|+--.+ |..+|-+.++|.++....
T Consensus 82 ~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 82 NQENVLEITLMDANYVM-DETLGTATFTVSSMKVGE 116 (749)
T ss_dssp TSCCBCEEEEEECCSSS-CEEEEEECCBSTTSCTTC
T ss_pred CCCCEEEEEEEECCCCC-CceeEEEEEEHHHcCCCC
Confidence 44558999999998878 999999999999986544
No 82
>3fze_A Protein STE5; alpha/beta/alpha, VWA-like fold (SCOP), cytoplasm, pheromone response, phosphoprotein, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 4f2h_A
Probab=29.72 E-value=17 Score=29.53 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=25.0
Q ss_pred eeeeeeeeccchhccceeeeEEece-eeecCCce
Q psy12064 101 LVGVAVLQLKDIVEQVKHQICVKDY-CFARDDRL 133 (148)
Q Consensus 101 ~vG~av~qL~~iAeKGScalcVKDy-Cf~r~dr~ 133 (148)
=+|++|+.=..+-+..||- .+|| ||++.||.
T Consensus 110 nlGI~viSNs~Me~~kS~L--fmDy~~F~~~GRr 141 (196)
T 3fze_A 110 HLGIVAVSNSNMEAKKSIL--FQDYRCFTSFGRR 141 (196)
T ss_dssp CEEEEEEECSCCCTTTCGG--GSCCGGGCCCC--
T ss_pred cccEEEEeCCccccCceeE--EecchhhcccccC
Confidence 3999999988888888886 6888 99999997
No 83
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=26.22 E-value=54 Score=28.79 Aligned_cols=35 Identities=9% Similarity=0.228 Sum_probs=31.0
Q ss_pred EEEeeeeceeeccCCeeeeeeeeeccchhccceee
Q psy12064 85 ELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQ 119 (148)
Q Consensus 85 EL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGSca 119 (148)
.|++.|.||--...|..+|.+.++|.++...++-.
T Consensus 240 ~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~~~~ 274 (674)
T 3pfq_A 240 RLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDG 274 (674)
T ss_dssp EEEEEEEECCSSSCCEECCBCCCBTTHHHHCCEEE
T ss_pred eeeeEEeecccccccccccccccchhhhccCCccc
Confidence 49999999999999999999999999998877633
No 84
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=23.60 E-value=58 Score=21.86 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=27.3
Q ss_pred eeeeeeccch--hccceeeeEEeceeeecCCceeEEEEEeeh
Q psy12064 103 GVAVLQLKDI--VEQVKHQICVKDYCFARDDRLVGVAVLQLK 142 (148)
Q Consensus 103 G~av~qL~~i--AeKGScalcVKDyCf~r~dr~vG~~vlql~ 142 (148)
|-+.|.++++ .|.|.+. |.+..+.--+-+.++|+
T Consensus 82 g~~sL~I~~v~~~D~G~Y~------C~v~~~~g~~~~~v~Lk 117 (125)
T 4gos_A 82 GNASLRLKNVQLTDAGTYK------CYIITSKGKGNANLEYK 117 (125)
T ss_dssp TBCCEEESSCCGGGCEEEE------EEEEETTEEEEEEEEEE
T ss_pred CeEEEEECCCChHHCEEEE------EEEEeCCCeEEEEEEEE
Confidence 5678888887 7889999 87777777788888876
No 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=23.56 E-value=76 Score=29.77 Aligned_cols=39 Identities=15% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEec
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKD 124 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKD 124 (148)
|+--.|.+.|+|+ +|..+|-++++|..+- .|.-++...|
T Consensus 714 pela~Lrf~V~D~----dddfiG~~~ipL~~L~-~GyR~vpL~~ 752 (816)
T 3qr0_A 714 PDLAVVRIIVSEE----NGKFIGHRVMPLDGIK-PGYRHVPLRN 752 (816)
T ss_dssp GGGCEEEEEEEET----TSCEEEEEEEESTTCC-CEEEEEEEEC
T ss_pred CCccEEEEEEEec----CCCeeeEEEEEHHHcC-CcceEEEEeC
Confidence 4444688999998 4889999999999874 4655555544
No 86
>4err_A Autotransporter adhesin; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.55A {Vibrio vulnificus}
Probab=23.56 E-value=33 Score=24.75 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=13.4
Q ss_pred HHHHHHHHhhhhcCC
Q psy12064 15 ASLDSIKNYFHAAGN 29 (148)
Q Consensus 15 ~aldtiK~yFhagg~ 29 (148)
.++|.+-+||+++|+
T Consensus 27 ~iid~l~eyh~~~~~ 41 (90)
T 4err_A 27 GILDQLDLVHQAKGR 41 (90)
T ss_dssp HHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHHHcch
Confidence 368999999999998
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=23.41 E-value=84 Score=29.88 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=28.7
Q ss_pred CCceEEEeeeeceeeccCCeeeeeeeeeccchhccceeeeEEec
Q psy12064 81 LEFFELHICVKDYCFARDDRLVGVAVLQLKDIVEQVKHQICVKD 124 (148)
Q Consensus 81 p~~yEL~~~VKDYCFar~Dr~vG~av~qL~~iAeKGScalcVKD 124 (148)
|+--.|.+.|+|+ +|..+|-++++|..+- .|.-++-.+|
T Consensus 788 pela~Lrf~V~D~----dddfiG~~~lpL~~L~-~GyR~vpL~~ 826 (885)
T 3ohm_B 788 PTLASLRIAAFEE----GGKFVGHRILPVSAIR-SGYHYVCLRN 826 (885)
T ss_dssp GGGCEEEEEEEET----TTEEEEEEEEETTTCC-CEEEEEEEEC
T ss_pred CCcCEEEEEEEcC----CccEEeeEEEEHHHcC-CCceEEEecC
Confidence 4444688899997 4899999999999874 5655555544
No 88
>3n5w_A Nitric oxide synthase; heme enzyme, substrate inhibitor, Zn oxidoreductase, oxidoreductase-oxidoreductase inhibitor COM; HET: HEM XFJ; 1.73A {Rattus norvegicus} SCOP: d.174.1.1 PDB: 2hx3_A* 2hx4_A* 3b3m_A* 3b3n_A* 3b3o_A* 3b3p_A* 3hsn_A* 3hso_A* 3hsp_A* 3jt3_A* 3jt4_A* 3jt5_A* 3jt6_A* 3jt7_A* 3jt8_A* 3jt9_A* 3jta_A* 3n2r_A* 3n5v_A* 1om4_A* ...
Probab=21.13 E-value=46 Score=29.71 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhhhhcC-CCccccccccCcchhhHHHHHhhhhhhhHHHH
Q psy12064 11 ALLDASLDSIKNYFHAAG-NGLKKTYLDKSPELASLRYALSLYTQTTDALI 60 (148)
Q Consensus 11 avld~aldtiK~yFhagg-~GlKk~fLeks~~l~slryalsLytqtTd~LI 60 (148)
.+|+.|.+-|.|||..-+ .|- +...++-.+++.==-+.+-|++|+++|+
T Consensus 57 ~ll~eA~~Fi~q~y~e~~~~~~-~~~~~Rl~eV~~eI~~tGTY~~T~eEL~ 106 (422)
T 3n5w_A 57 QLFPLAKEFLDQYYSSIKRFGS-KAHMDRLEEVNKEIESTSTYQLKDTELI 106 (422)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTS-HHHHHHHHHHHHHHHHHSSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCc-HHHHHHHHHHHHHHHhhCCccCCHHHHh
Confidence 389999999999999865 221 1223332233333345668999999998
No 89
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=20.69 E-value=28 Score=24.81 Aligned_cols=46 Identities=11% Similarity=0.205 Sum_probs=29.7
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhhcCCCccccccccCcchhhHHH
Q psy12064 2 EKSLSPKQCALLDASLDSIKNYFHAAGNGLKKTYLDKSPELASLRY 47 (148)
Q Consensus 2 ~k~LtpkQCavld~aldtiK~yFhagg~GlKk~fLeks~~l~slry 47 (148)
..+||+.|-+++-.....++..--.=|.-+=..+++..|+++.+.-
T Consensus 6 ~m~Ls~~~~~~I~~sw~~v~~~~~~~g~~~y~rlF~~~P~~k~~F~ 51 (154)
T 4b4y_A 6 AMQVSEEQQSLIMEDVQVLLPNYDDFVEDVLQQFMEENPETFQIFP 51 (154)
T ss_dssp CCCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCTTHHHHST
T ss_pred cCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHCHhHHHHhH
Confidence 4679999999988888877753222222233456677777776543
No 90
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=20.16 E-value=87 Score=20.95 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=21.5
Q ss_pred CCCchhh-HHHHHHHHHHHHhhhhcC
Q psy12064 4 SLSPKQC-ALLDASLDSIKNYFHAAG 28 (148)
Q Consensus 4 ~LtpkQC-avld~aldtiK~yFhagg 28 (148)
+||.++. +++|..+|.|.+....|+
T Consensus 18 ~lsk~~~~~~v~~~~~~i~~~L~~g~ 43 (93)
T 3rhi_A 18 EISQKEATVVVQTVVESITNTLAAGE 43 (93)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5777777 589999999999999887
Done!