BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12066
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P30052|SCAL_DROME Protein scalloped OS=Drosophila melanogaster GN=sd PE=1 SV=1
Length = 440
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 94/136 (69%), Gaps = 14/136 (10%)
Query: 12 GTISSPWTPGSAAVPPGA----DTNGSGGDSKHALDVGDL-DDDKDLAAADAEGVWSPDI 66
GTI SPWTP +A PPGA DTNGS DSK+ LDVGD+ DD+KDL++ADAEGVWSPDI
Sbjct: 40 GTIPSPWTPVNAG-PPGALGSADTNGSMVDSKN-LDVGDMSDDEKDLSSADAEGVWSPDI 97
Query: 67 EQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKGAVGGIDLMGF 122
EQSFQEAL+IYPPCGRRKIILSDEGKMY E + + + + T+ K I ++
Sbjct: 98 EQSFQEALSIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR 157
Query: 123 LKAQRYEGR---ELWE 135
K + + + + W+
Sbjct: 158 RKLREIQAKIKVQFWQ 173
>sp|P70210|TEAD3_MOUSE Transcriptional enhancer factor TEF-5 OS=Mus musculus GN=Tead3 PE=2
SV=2
Length = 439
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 71/119 (59%), Gaps = 19/119 (15%)
Query: 15 SSPWTPGSAAVPPGADTNGSGGDSKHALDVGDLDDDKDLAAADAEGVWSPDIEQSFQEAL 74
S+ WT S+ P A +GS G LD G LD+D AEGVWSPDIEQSFQEAL
Sbjct: 3 SNSWTANSS--PGEAREDGSEG-----LDKG-LDND-------AEGVWSPDIEQSFQEAL 47
Query: 75 AIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKGAVGGIDLMGFLKAQRYE 129
AIYPPCGRRKIILSDEGKMY E + + + + T+ K I ++ K + Y+
Sbjct: 48 AIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKKVREYQ 106
>sp|P48984|TEAD4_CHICK Transcriptional enhancer factor TEF-3 OS=Gallus gallus GN=TEAD4
PE=2 SV=1
Length = 438
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 74/122 (60%), Gaps = 18/122 (14%)
Query: 14 ISSPWTPGSAAVPPGADTNGSGGDSKHALDVGDLDDDKDLAAADAEGVWSPDIEQSFQEA 73
++S W+ S A P G +N SGG ALD +D+D AEGVWSPDIEQSFQEA
Sbjct: 1 MTSEWS--SPASPEG--SNDSGGSE--ALD-KPIDND-------AEGVWSPDIEQSFQEA 46
Query: 74 LAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKGAVGGIDLMGFLKAQRYE 129
LAIYPPCGRRKIILSDEGKMY E + + + + T+ K I ++ KA+ +
Sbjct: 47 LAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKAREIQ 106
Query: 130 GR 131
+
Sbjct: 107 AK 108
>sp|Q99594|TEAD3_HUMAN Transcriptional enhancer factor TEF-5 OS=Homo sapiens GN=TEAD3 PE=1
SV=2
Length = 435
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 4/77 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKG 112
DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+ K
Sbjct: 30 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQ 89
Query: 113 AVGGIDLMGFLKAQRYE 129
I ++ K + Y+
Sbjct: 90 VSSHIQVLARKKVREYQ 106
>sp|Q15561|TEAD4_HUMAN Transcriptional enhancer factor TEF-3 OS=Homo sapiens GN=TEAD4 PE=1
SV=3
Length = 434
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKG 112
DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+ K
Sbjct: 38 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQ 97
Query: 113 AVGGIDLMGFLKAQRYEGR 131
I ++ KA+ + +
Sbjct: 98 VSSHIQVLARRKAREIQAK 116
>sp|P28347|TEAD1_HUMAN Transcriptional enhancer factor TEF-1 OS=Homo sapiens GN=TEAD1 PE=1
SV=2
Length = 426
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKG 112
DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+ K
Sbjct: 30 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQ 89
Query: 113 AVGGIDLMGFLKAQRYEGR 131
I ++ K++ + +
Sbjct: 90 VSSHIQVLARRKSRDFHSK 108
>sp|P30051|TEAD1_MOUSE Transcriptional enhancer factor TEF-1 OS=Mus musculus GN=Tead1 PE=2
SV=2
Length = 426
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKG 112
DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+ K
Sbjct: 30 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQ 89
Query: 113 AVGGIDLMGFLKAQRYEGR 131
I ++ K++ + +
Sbjct: 90 VSSHIQVLARRKSRDFHSK 108
>sp|P48301|TEAD2_MOUSE Transcriptional enhancer factor TEF-4 OS=Mus musculus GN=Tead2 PE=2
SV=1
Length = 445
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 9/87 (10%)
Query: 55 AADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGG 110
+ DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+
Sbjct: 38 SPDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTR 97
Query: 111 KGAVGGIDLMGFLKAQRYEGRELWEEL 137
K I ++ R + RE+ +L
Sbjct: 98 KQVSSHIQVLA-----RRKSREIQSKL 119
>sp|Q90701|TEAD3_CHICK Transcriptional enhancer factor TEF-5 OS=Gallus gallus GN=TEAD3
PE=2 SV=2
Length = 433
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY 94
DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY
Sbjct: 30 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY 67
>sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4 OS=Homo sapiens GN=TEAD2 PE=1
SV=2
Length = 447
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
Query: 59 EGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY---ETVGTFGRKKN-PTKGGKGAV 114
EGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY E + + + + T+ K
Sbjct: 42 EGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVS 101
Query: 115 GGIDLMGFLKAQRYEGRELWEEL 137
I ++ R + RE+ +L
Sbjct: 102 SHIQVLA-----RRKSREIQSKL 119
>sp|Q62296|TEAD4_MOUSE Transcriptional enhancer factor TEF-3 OS=Mus musculus GN=Tead4 PE=1
SV=2
Length = 427
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYETVGTFGR----KKNPTKGGKG 112
DAEGVWSP+IE+SFQEALAIYPPCGRRKIIL++EGKMY R + T+ K
Sbjct: 31 DAEGVWSPEIERSFQEALAIYPPCGRRKIILTEEGKMYGRNELIARHIKLRTGKTRTRKQ 90
Query: 113 AVGGIDLMGFLKAQRYEGR 131
I ++ KA+ + +
Sbjct: 91 VSSHIQVLARRKAREIQAK 109
>sp|Q19849|EGL44_CAEEL Transcription enhancer factor-like protein egl-44 OS=Caenorhabditis
elegans GN=egl-44 PE=1 SV=4
Length = 486
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 26 PPGADTNGSGGDSKHALDVGDLDDDKDLAAADAEGVWSPDIEQSFQEALAIYPPCGRRKI 85
PP D GS G S L D + DAEGVWS DI+Q+FQEALAIYPPCGRRKI
Sbjct: 64 PPAGDGPGSAG-SMAPESTSSLSD----LSGDAEGVWSIDIDQAFQEALAIYPPCGRRKI 118
Query: 86 ILSDEGKMY 94
I+SDEGKMY
Sbjct: 119 IISDEGKMY 127
>sp|P20945|ABAA_EMENI Regulatory protein abaA OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=abaA PE=4
SV=3
Length = 796
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 57 DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY 94
D E VWS ++E +FQ+AL PP GRRK S+ GK Y
Sbjct: 135 DGEPVWSDELEDAFQQALEANPPMGRRK--WSERGKSY 170
>sp|Q9SP32|DCL1_ARATH Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana GN=DCL1 PE=1
SV=2
Length = 1909
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 91 GKMYETVGTFGRKKNPTKGGKGAVGGIDLM---GFLKAQRYEGRELWEELPVGRAELRGG 147
GK+ + FG+K +PT G +GAV D++ G L + +E+ E+L G+ + G
Sbjct: 1146 GKLRHNI-VFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADG 1204
Query: 148 DVLWE---GEVVMYLGKGR 163
++ E G++V G+
Sbjct: 1205 CMVAEDLIGKIVTAAHSGK 1223
>sp|A7HDA9|PURA_ANADF Adenylosuccinate synthetase OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=purA PE=3 SV=1
Length = 431
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 97 VGTFGRKKNPTKGGKGAVGGIDLMGFLKAQRYEGRELWEELPVGRAEL 144
+GT GR PT K A G+ + L A R E R++ E LP R EL
Sbjct: 127 IGTTGRGIGPTYEDKVARRGLRIRDLLDAARLE-RKVKERLPAAREEL 173
>sp|P02602|MYL1_RABIT Myosin light chain 1/3, skeletal muscle isoform OS=Oryctolagus
cuniculus GN=MYL1 PE=1 SV=3
Length = 192
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 52 DLAAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYETVGTFGRKKNPTKGGK 111
DL+A E +S + + F+EA +Y G KI LS G + +GT NPT
Sbjct: 37 DLSAIKIE--FSKEQQDEFKEAFLLYDRTGDSKITLSQVGDVLRALGT-----NPTNAEV 89
Query: 112 GAVGG 116
V G
Sbjct: 90 KKVLG 94
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 11 TGTISSPWTPGSAAVPPGADTNGSGGDSKHALDVGDLD-DDKDLAAADAEGVWSPDIEQS 69
T I W AA+ P D + D+KH+L++ +L D+ + + A + DI Q+
Sbjct: 4465 TPVIEIIWQKDGAALSPSPDCRVTDADNKHSLELSNLTVQDRGIYSCKASNKFGADICQA 4524
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 30.4 bits (67), Expect = 5.5, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 19 TPGSAAVPPGADTNGSGGDSKHALDVGDLDDDKDLAAADAEGVWSPDIEQSFQEALAIY- 77
+PGS + ADT G G + G+ D + + +I + F Y
Sbjct: 3555 SPGSRDLNGDADTEGKEGKNSDQASAGEKDLGRKCKRKKKDDGSWCEICELFLPMPVTYH 3614
Query: 78 -----PPCGRRKIILSDEGKMYETVGTF--GRKKNPTKGGKGA 113
P CG+ S +GK Y +VG F G N +GGKGA
Sbjct: 3615 MRIAHPGCGK-----SAKGKGYNSVGIFCEGWAGNCGEGGKGA 3652
>sp|O15085|ARHGB_HUMAN Rho guanine nucleotide exchange factor 11 OS=Homo sapiens GN=ARHGEF11
PE=1 SV=1
Length = 1522
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 15/92 (16%)
Query: 10 VTGTISSPWTPGS-AAVPPGADTNGSGGDSKHALDVGDLDDDKDLAAADAE--------- 59
V S PW PGS PPG G G +++ A G+ + +D+ E
Sbjct: 1240 VISVTSHPWDPGSPGQAPPG----GEGDNTQLAGLEGERPEQEDMGLCSLEHLPPRTRNS 1295
Query: 60 GVW-SPDIEQSFQEALAIYPPCGRRKIILSDE 90
G+W SP+++++ E + G K++ E
Sbjct: 1296 GIWESPELDRNLAEDASSTEAAGGYKVVRKAE 1327
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 30.0 bits (66), Expect = 7.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 6 GFGLVTGTISSPWTPGSAAVPPGADTNGSGG 36
GFG TGT S TP +PP N S G
Sbjct: 189 GFGFSTGTNESEITPNIKVLPPKKKKNASWG 219
>sp|Q2YKR8|UGPC_BRUA2 sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Brucella
abortus (strain 2308) GN=ugpC PE=3 SV=1
Length = 351
Score = 29.6 bits (65), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Query: 5 PGFGLVTGTISSPWTPGSA-AVPPGADTNGSGGDSKHALDVGDLDDDKDLAAADAEGVWS 63
P L+ S+PW PG A +P G T G + L+ GD D D A E V
Sbjct: 238 PSMNLLQSPESAPWQPGRAITLPSGGYTFGVRPEDIRILEEGDQDADGFNAQVRIEAVEL 297
Query: 64 PDIEQSFQEALA 75
E AL+
Sbjct: 298 VGAESYIHAALS 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.139 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,904,887
Number of Sequences: 539616
Number of extensions: 3470341
Number of successful extensions: 6397
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6374
Number of HSP's gapped (non-prelim): 40
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)