BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1207
(113 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+G+ +E+DKF+RRLV+V+ HV ECKELL LMGIPYIE APCEAEA
Sbjct: 117 SGNTEEVDKFSRRLVKVTKDHVAECKELLKLMGIPYIE---------------APCEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+VKAGKVYATATEDMDALTFG+NI+LR
Sbjct: 162 QCAALVKAGKVYATATEDMDALTFGSNIILRH 193
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E+DKFNRRLV+V+ H E KELL LMG+PYIE APCEAEAQ
Sbjct: 118 GDQAEVDKFNRRLVKVTRHHADEAKELLRLMGVPYIE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVKAGK+YATATEDMDALTFG++I+LR
Sbjct: 163 CAAMVKAGKIYATATEDMDALTFGSDIVLRH 193
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 68/91 (74%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA IDKF++RLV+V+S H ECKELL LMG+P++E APCEAEAQ
Sbjct: 118 GDATGIDKFSKRLVKVTSTHTTECKELLKLMGVPFVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVKAGKVYATATEDMDALTFG+ +LLR
Sbjct: 163 CAAMVKAGKVYATATEDMDALTFGSPVLLRH 193
>gi|307214986|gb|EFN89831.1| Flap endonuclease 1-B [Harpegnathos saltator]
Length = 380
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA+ IDKFNRRLV+V+ H +E K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GDAEAIDKFNRRLVKVTKTHAEEAKQLLKLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG N+LLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCNVLLRR 193
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E+DKFNRRLV+V+ H E K+LL+LMG+PYIE APCEAEAQ
Sbjct: 118 GDATEVDKFNRRLVKVTRHHADEAKQLLTLMGVPYIE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVK G VYATATEDMDALTFG+N+LLR
Sbjct: 163 CAAMVKGGLVYATATEDMDALTFGSNVLLRH 193
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++I+KFNRRLV+V+ VH E K+LL LMGIPY+E APCEAEAQ
Sbjct: 118 GNAEDIEKFNRRLVKVTQVHADEAKQLLKLMGIPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG N+LLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCNVLLRR 193
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + IDKF+RRLVRV+ H +ECK+LL LMGIPY+E APCEAEAQ
Sbjct: 118 GDTENIDKFSRRLVRVTKEHNEECKQLLKLMGIPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK+GKVYAT TEDMDALTFGT ++LR
Sbjct: 163 CAALVKSGKVYATGTEDMDALTFGTTVMLRH 193
>gi|321473340|gb|EFX84308.1| hypothetical protein DAPPUDRAFT_47502 [Daphnia pulex]
Length = 374
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 15/98 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L L GDA E++K N+RLV+V+ H ECK+LL+LMGIPY+E
Sbjct: 110 QLVLATDAGDAVEMEKMNKRLVKVNKGHTDECKQLLTLMGIPYVE--------------- 154
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
APCEAEAQCAA+VKAGKVYATATEDMD+LTFG+N+LLR
Sbjct: 155 APCEAEAQCAALVKAGKVYATATEDMDSLTFGSNVLLR 192
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++I+KFNRRLV+V+ H +E K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GNAEDIEKFNRRLVKVTKEHAEEAKQLLKLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVKAGKV+ATATEDMDALTFG NILLR+
Sbjct: 163 CAAMVKAGKVFATATEDMDALTFGCNILLRR 193
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EI+KFNRRLVRV+ H +E KELLSLMG+PY++ APCEAEAQ
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 67/90 (74%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EI+KFNRRLVRV+ H +E KELLSLMG+PY++ APCEAEAQ
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLSLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 70/91 (76%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++I+KFNRRLV+V+ H KE K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GNAEDIEKFNRRLVKVTKEHAKEAKQLLQLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG N+LLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCNVLLRR 193
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 69/91 (75%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++I+KFNRRLV+V+ H E K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GNAEDIEKFNRRLVKVTKEHADEAKQLLKLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVKAGKV+ATATEDMDALTFG NILLR+
Sbjct: 163 CAAMVKAGKVFATATEDMDALTFGCNILLRR 193
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EI+KFNRRLVRV+ H +E KELL LMG+PY+E APCEAEAQ
Sbjct: 118 GDDAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++I+KFNRRLV+V+ H E KELL LMG+PY+E APCEAEAQ
Sbjct: 118 GAVEDIEKFNRRLVKVTKQHANEAKELLRLMGVPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYATATEDMDALTFG+NILLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSNILLRH 193
>gi|38488751|ref|NP_942115.1| flap endonuclease 1 [Danio rerio]
gi|29436437|gb|AAH49413.1| Flap structure-specific endonuclease 1 [Danio rerio]
Length = 330
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H +ECK+LLSLMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYATATEDMD LTFGT +LLR
Sbjct: 163 CAALVKAGKVYATATEDMDGLTFGTTVLLRH 193
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 67/90 (74%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EI+KFNRRLVRV+ H +E KELL LMG+PY++ APCEAEAQ
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG++ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSSKLLR 192
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EIDKFNRRLVRV+ H +E KELL LMG+PY++ APCEAEAQ
Sbjct: 118 GDEAEIDKFNRRLVRVTKEHSREAKELLKLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSCKLLR 192
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKFNRRLV+V+ H E KELL LMGIPY++ APCEAEAQ
Sbjct: 118 GNVEAIDKFNRRLVKVTKTHADEAKELLQLMGIPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG N+LLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCNVLLRR 193
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD QE++KF +RLV+V+ HV E K+LLSLMGIPY+E APCEAEAQ
Sbjct: 118 GDIQEVEKFQKRLVKVTPEHVSEAKKLLSLMGIPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYATATEDMDALTFG++IL+R
Sbjct: 163 CAALTKAGKVYATATEDMDALTFGSSILVRN 193
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++IDKFNRRLV+V+ H E KELL LMG+PY++ APCEAEAQ
Sbjct: 118 GVTEDIDKFNRRLVKVTKQHSNEAKELLKLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK GKVYATATEDMDALTFG+NILLR
Sbjct: 163 CAALVKGGKVYATATEDMDALTFGSNILLRH 193
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++I+KFNRRLV+V+ H E KELL LMG+PY+E APCEAEAQ
Sbjct: 118 GATEDIEKFNRRLVKVTKHHANEAKELLRLMGVPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+V+AGKVYATATEDMDALTFG+NILLR
Sbjct: 163 CAALVRAGKVYATATEDMDALTFGSNILLRH 193
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF +RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFTKRLVKVTKQHNDECKKLLTLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGTNILLR
Sbjct: 163 CAALVKAGKVFATATEDMDGLTFGTNILLRH 193
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 70/91 (76%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +++DKFNRRLV+V+ H +E K+LL+LMGIP+I+ APCEAEAQ
Sbjct: 118 GNVEDVDKFNRRLVKVTKQHGEEAKQLLTLMGIPFID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAMVK+GKVYATATEDMDALTFG N+LLR+
Sbjct: 163 CAAMVKSGKVYATATEDMDALTFGCNVLLRR 193
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++DKFNRRLV+V+ H E KELL LMG+PY+E APCEAEAQ
Sbjct: 118 GNEADMDKFNRRLVKVTKEHANEAKELLKLMGVPYVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYATATEDMDALTFG+ ILLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSGILLRH 193
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I+KFNRRLVRV+ H KE KELL+LMG+PY++ APCEAEAQ
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I+KFNRRLVRV+ H KE KELL+LMG+PY++ APCEAEAQ
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I+KFNRRLVRV+ H KE KELL+LMG+PY++ APCEAEAQ
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I+KFNRRLVRV+ H KE KELL+LMG+PY++ APCEAEAQ
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHAKEAKELLTLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++I+KFNRRLV+V+ H E K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GNAKDIEKFNRRLVKVTKEHALETKQLLQLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG NILLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCNILLRR 193
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H +ECK+LLSLMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYATATEDMD LTFGT +LLR
Sbjct: 163 CAALVKAGKVYATATEDMDGLTFGTTVLLRH 193
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 68/92 (73%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG+ + I+KF++RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 117 TGEQENIEKFSKRLVKVTKQHSDECKKLLTLMGVPYIE---------------APCEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGTN+LLR
Sbjct: 162 SCAALVKAGKVFATATEDMDGLTFGTNVLLRH 193
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 65/90 (72%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD EI+KFNRRLVRV+ H E KELL LMG+PY++ APCEAEAQ
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHSNEAKELLKLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSCKLLR 192
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIE---------------APCEAEAT 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGTN+LLR
Sbjct: 163 CAALVKAGKVFATATEDMDGLTFGTNVLLRH 193
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 65/90 (72%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I+KFNRRLVRV+ H E KELL+LMG+PY++ APCEAEAQ
Sbjct: 118 GDDAGIEKFNRRLVRVTKEHANEAKELLTLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSTKLLR 192
>gi|449685242|ref|XP_002159259.2| PREDICTED: flap endonuclease 1-like, partial [Hydra magnipapillata]
Length = 230
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + IDKF+RRLV+V+ H KECKELL LMG+PYI+ APCEAEAQ
Sbjct: 22 GDQENIDKFSRRLVKVTPQHNKECKELLDLMGVPYID---------------APCEAEAQ 66
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GKVYA +EDMD+LTFG NILLR
Sbjct: 67 CAELVKGGKVYAMGSEDMDSLTFGANILLRH 97
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +I+KFNRRLVRV+ H +E KELL LMG+PY++ APCEAEAQ
Sbjct: 118 GDEAQIEKFNRRLVRVTKEHSREAKELLKLMGVPYVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYATATEDMDALTFG+ LLR
Sbjct: 163 CAALVKAGKVYATATEDMDALTFGSCKLLR 192
>gi|265141450|gb|ACY74444.1| flap endonuclease [Carukia barnesi]
Length = 236
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TGD + I+KF+RRLV+V+ H ECK+LL LMGIPYIE APCEAEA
Sbjct: 117 TGDTENIEKFSRRLVKVTQQHNNECKQLLKLMGIPYIE---------------APCEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA +VK GKV+A ATEDMD LTFG+N++LR
Sbjct: 162 QCAELVKGGKVFAAATEDMDCLTFGSNVMLRH 193
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I+KFNRRLV+VS H +ECKELL MGIP+I AP EAEAQ
Sbjct: 118 GDEENIEKFNRRLVKVSKQHNEECKELLKYMGIPFIN---------------APGEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYAT TEDMDALTFGT +LLR
Sbjct: 163 CAALVKAGKVYATGTEDMDALTFGTTVLLR 192
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H +CK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIE---------------APCEAEAT 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGTN+LLR
Sbjct: 163 CAALVKAGKVFATATEDMDGLTFGTNVLLRH 193
>gi|339253602|ref|XP_003372024.1| flap endonuclease 1a [Trichinella spiralis]
gi|316967624|gb|EFV52031.1| flap endonuclease 1a [Trichinella spiralis]
Length = 381
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 69/99 (69%), Gaps = 19/99 (19%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD++ I+KF+RRL +VS HV ECK LL LMGIPYIE APCEAEAQ
Sbjct: 128 GDSEAINKFSRRLTKVSKEHVDECKRLLKLMGIPYIE---------------APCEAEAQ 172
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFS 108
CAA+VKA KV+A ATEDMD LTFG++I+LR + TFS
Sbjct: 173 CAALVKAKKVFAAATEDMDTLTFGSDIMLR----YLTFS 207
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF+RRLV+V+ H E K+LL LMGIPYI+ APCEAEAQ
Sbjct: 118 GNVEAIDKFSRRLVKVTKNHADEAKQLLQLMGIPYID---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMDALTFG +ILLR+
Sbjct: 163 CAALVKAGKVFATATEDMDALTFGCDILLRR 193
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGK YATATEDMD LTFGT++LLR
Sbjct: 163 CAALVKAGKAYATATEDMDGLTFGTSVLLRH 193
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGT +LLR
Sbjct: 163 CAALVKAGKVFATATEDMDGLTFGTGVLLRH 193
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H +ECK+LLSLMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYATATEDM LTFGT +LLR
Sbjct: 163 CAALVKAGKVYATATEDMAGLTFGTTVLLRH 193
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H +CK+LL+LMG+PYIE APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTKQHNDDCKKLLTLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK GKV+ATATEDMD LTFGTN+LLR
Sbjct: 163 CAALVKEGKVFATATEDMDGLTFGTNVLLRH 193
>gi|241627391|ref|XP_002409855.1| endonuclease, putative [Ixodes scapularis]
gi|215503262|gb|EEC12756.1| endonuclease, putative [Ixodes scapularis]
Length = 384
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 15/93 (16%)
Query: 8 LTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAE 67
+G+ ++I+KF++RLV+V+ H ++CK LL LMG+PYIE APCEAE
Sbjct: 114 FSGNQEDINKFSKRLVKVTRQHGEDCKRLLGLMGVPYIE---------------APCEAE 158
Query: 68 AQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AQCA +VK GKVY TATEDMD LTFGTN+LLR
Sbjct: 159 AQCAELVKGGKVYGTATEDMDGLTFGTNVLLRH 191
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + IDKF++RLV+V+ H ECK+LL+LMG+PY+E APCEAEA
Sbjct: 118 GEQENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYVE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKV+ATATEDMD LTFGT +LLR
Sbjct: 163 CAALVKAGKVFATATEDMDGLTFGTGVLLRH 193
>gi|387916082|gb|AFK11650.1| Flap endonuclease 1-B [Callorhinchus milii]
Length = 382
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD++ +++FN+RLV+V+ H +ECK LL+LMGIPY+E APCEAEA
Sbjct: 118 GDSENVERFNKRLVKVTKQHNEECKTLLTLMGIPYLE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK+GKVY TATEDMD L FGT ILLR+
Sbjct: 163 CAALVKSGKVYGTATEDMDGLAFGTTILLRR 193
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++KF +RLV+V+ H ECK+LLSLMG+PYIE APCEAEA
Sbjct: 118 GEQENVEKFTKRLVKVTKQHNDECKKLLSLMGVPYIE---------------APCEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK GKV+ATATEDMD LTFGTN+LLR
Sbjct: 163 CAALVKEGKVFATATEDMDGLTFGTNVLLRH 193
>gi|47180383|emb|CAG14230.1| unnamed protein product [Tetraodon nigroviridis]
Length = 103
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + I+KF +RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 20 GEQENIEKFTKRLVKVTKQHNDECKKLLTLMGVPYIE---------------APCEAEAS 64
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKV+ TATEDMD LTFGTN+LLR
Sbjct: 65 CAALAKAGKVFGTATEDMDGLTFGTNVLLRH 95
>gi|357601961|gb|EHJ63212.1| flap endonuclease-1 [Danaus plexippus]
Length = 266
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
++ + GD IDKFNRRLV+V+ H E ++LL LMGIP +E APC
Sbjct: 1 MYNIPGDTASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVE---------------APC 45
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEAQCA +VK GKVYA ATEDMDALTFG N+LLR
Sbjct: 46 EAEAQCAELVKGGKVYAVATEDMDALTFGANVLLRH 81
>gi|148234716|ref|NP_001080984.1| flap endonuclease 1-B [Xenopus laevis]
gi|82071413|sp|P70054.1|FEN1B_XENLA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B;
Short=xFEN-1b
gi|1549393|gb|AAB08478.1| XFEN1b [Xenopus laevis]
gi|213623174|gb|AAI69390.1| Flap endonuclease 1 [Xenopus laevis]
gi|213626408|gb|AAI69394.1| Flap endonuclease 1 [Xenopus laevis]
Length = 382
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 64/86 (74%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+KFN+RLV+V+ H +ECK+LLSLMGIPY++ APCEAEA CAA+V
Sbjct: 123 IEKFNKRLVKVTKQHNEECKKLLSLMGIPYVD---------------APCEAEATCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMDALTFGT +LLR
Sbjct: 168 KAGKVYAAATEDMDALTFGTPVLLRH 193
>gi|196004300|ref|XP_002112017.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
gi|317376198|sp|B3RVF0.1|FEN1_TRIAD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190585916|gb|EDV25984.1| hypothetical protein TRIADDRAFT_24563 [Trichoplax adhaerens]
Length = 377
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA IDKF RR VR++ H +E K+LL LMG+P ++ APCEAE+Q
Sbjct: 118 GDADNIDKFTRRTVRMTPEHCEEGKKLLKLMGVPVVQ---------------APCEAESQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYAT TEDMDALTFG+N++LR
Sbjct: 163 CAALVKAGKVYATGTEDMDALTFGSNVMLRH 193
>gi|62859561|ref|NP_001017005.1| flap endonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+KFN+RLV+V+ H +ECK+LL+LMG+PY++ APCEAEA CAA+V
Sbjct: 123 IEKFNKRLVKVTKQHNEECKKLLTLMGVPYVD---------------APCEAEATCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMDALTFGT +LLR
Sbjct: 168 KAGKVYAAATEDMDALTFGTPVLLRH 193
>gi|317376168|sp|B1H158.1|FEN1_XENTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|169642201|gb|AAI60482.1| flap structure specific endonuclease 1 [Xenopus (Silurana)
tropicalis]
Length = 382
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+KFN+RLV+V+ H +ECK+LL+LMG+PY++ APCEAEA CAA+V
Sbjct: 123 IEKFNKRLVKVTKQHNEECKKLLTLMGVPYVD---------------APCEAEATCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMDALTFGT +LLR
Sbjct: 168 KAGKVYAAATEDMDALTFGTPVLLRH 193
>gi|326429821|gb|EGD75391.1| flap endonuclease-1 [Salpingoeca sp. ATCC 50818]
Length = 380
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++KF RRLV+V+ H ++C+ELL LMGIPYI +APCEAEAQ
Sbjct: 118 GVQADMEKFTRRLVKVTPEHNRQCQELLDLMGIPYI---------------VAPCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VKAGKV+ATATEDMDALTFGT++LLR
Sbjct: 163 CAELVKAGKVFATATEDMDALTFGTSVLLRH 193
>gi|2674207|gb|AAB88707.1| flap endonuclease 1 [Xenopus laevis]
gi|115528353|gb|AAI24978.1| Fen1-A protein [Xenopus laevis]
Length = 382
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+KF +RLV+V+ H +ECK+LL+LMGIPY++ APCEAEA CAA+V
Sbjct: 123 IEKFTKRLVKVTKQHNEECKKLLTLMGIPYVD---------------APCEAEATCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMDALTFGT +LLR
Sbjct: 168 KAGKVYAAATEDMDALTFGTPVLLRH 193
>gi|148230426|ref|NP_001080960.1| flap endonuclease 1-A [Xenopus laevis]
gi|82071385|sp|P70040.1|FEN1A_XENLA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A;
Short=xFEN-1a
gi|1490870|gb|AAB06176.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|4106358|gb|AAD02814.1| flap endonuclease 1 [Xenopus laevis]
gi|213623454|gb|AAI69765.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|213625072|gb|AAI69761.1| 5' nuclease xFEN1a [Xenopus laevis]
Length = 382
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+KF +RLV+V+ H +ECK+LL+LMGIPY++ APCEAEA CAA+V
Sbjct: 123 IEKFTKRLVKVTKQHNEECKKLLTLMGIPYVD---------------APCEAEATCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMDALTFGT +LLR
Sbjct: 168 KAGKVYAAATEDMDALTFGTPVLLRH 193
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 66/91 (72%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++++KF+RRLV V+ H ++C++LL+LMGIP+I +AP EAEAQ
Sbjct: 118 GDTEQMEKFSRRLVHVTREHNEQCRQLLTLMGIPFI---------------IAPTEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GKV+ATATEDMDALTFGT +LLR
Sbjct: 163 CAELVKGGKVFATATEDMDALTFGTTVLLRH 193
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+++ ++KF RRLV+V+ H +ECK LL+LMG+PYI APCEAEAQ
Sbjct: 118 GESETMEKFQRRLVKVTKEHNEECKRLLTLMGVPYIS---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK+G V+A TEDMDALTFG+ +LLR
Sbjct: 163 CAALVKSGSVFAAGTEDMDALTFGSKVLLRH 193
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA+E +KF RRLV+V+ +E K+LL LMGIP +E APCEAEAQ
Sbjct: 118 GDAKEAEKFERRLVKVTKQQNEEVKQLLGLMGIPVVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA +VKAGKVY TATEDMDALTFG+ +LLR L+
Sbjct: 163 CANLVKAGKVYGTATEDMDALTFGSCVLLRHLLA 196
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
+++KF +RLV+V+ H ECK+LL+LMGIPY++ APCEAEAQCA +
Sbjct: 122 DVNKFQKRLVKVTKEHNAECKKLLTLMGIPYVD---------------APCEAEAQCAEL 166
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
K GKVYA TEDMD LTFGTNI+LR
Sbjct: 167 AKKGKVYAAGTEDMDVLTFGTNIMLRH 193
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 15/101 (14%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
LT GDA+E +KF RRLV+V+ +E K LL LMGIP +E A
Sbjct: 111 LTEAKEKGDAKEAEKFERRLVKVTKQQNEEVKHLLGLMGIPVVE---------------A 155
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
PCEAEAQCA +VKAGKV+ TATEDMDALTFG+++LLR L+
Sbjct: 156 PCEAEAQCAHLVKAGKVFGTATEDMDALTFGSSVLLRHLLA 196
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like
[Saccoglossus kowalevskii]
Length = 379
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++K+ RRLV+V+ H +ECK+LL+ MGIPY++ AP EAEAQ
Sbjct: 118 GETENVNKYQRRLVKVTKEHNEECKKLLTFMGIPYLD---------------APGEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CA +VKAGKVYATATEDMD+LTFG++ ++R M C E
Sbjct: 163 CAELVKAGKVYATATEDMDSLTFGSSTVVRHMTFSEARKMPCQE 206
>gi|301117906|ref|XP_002906681.1| flap endonuclease 1 [Phytophthora infestans T30-4]
gi|317374909|sp|D0MY34.1|FEN1_PHYIT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|262108030|gb|EEY66082.1| flap endonuclease 1 [Phytophthora infestans T30-4]
Length = 389
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++ID+FN+RLVR + H ++CKELL LMG+P+I APCEAEA
Sbjct: 124 GNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHI---------------TAPCEAEAS 168
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ K G+VYA TEDMDALTFG +L R+
Sbjct: 169 CAALAKGGRVYAAGTEDMDALTFGVPVLYRR 199
>gi|320202935|ref|NP_001188509.1| flap endonuclease-1 [Bombyx mori]
gi|268044461|gb|ACY92094.1| flap endonuclease-1 [Bombyx mori]
Length = 380
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +DKFNRRLV+V+ +E K+LL LMG+P ++ APCEAEAQ
Sbjct: 118 GDTASVDKFNRRLVKVTKQRSEEAKQLLKLMGVPVVD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VK+GKV+A ATEDMDALTFG +LLR
Sbjct: 163 CAALVKSGKVFAAATEDMDALTFGAPVLLRH 193
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA+E +KF RRLV+V+ ++ K+LL LMGIP +E APCEAEAQ
Sbjct: 118 GDAKEAEKFERRLVKVTKQQNEDVKQLLGLMGIPVVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA +VKAGKV+ TATEDMDALTFG+ +LLR L+
Sbjct: 163 CAHLVKAGKVFGTATEDMDALTFGSCVLLRHLLA 196
>gi|432089490|gb|ELK23431.1| Flap endonuclease 1 [Myotis davidii]
Length = 380
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 117 AGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 162 SCAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF++RLV+V+ H +ECK+LL LMGIP++E APCEAEAQCA++VK
Sbjct: 125 KFSKRLVKVTKEHNEECKQLLGLMGIPFVE---------------APCEAEAQCASLVKG 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G VYAT TEDMDALTFG+ +LLR
Sbjct: 170 GHVYATGTEDMDALTFGSTVLLRH 193
>gi|344258300|gb|EGW14404.1| Flap endonuclease 1 [Cricetulus griseus]
Length = 412
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 150 GVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 194
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 195 CAALVKAGKVYAAATEDMDCLTFGSPVLMR 224
>gi|348688657|gb|EGZ28471.1| hypothetical protein PHYSODRAFT_294028 [Phytophthora sojae]
Length = 390
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++ID+FN+RLVR + H ++CKELL LMG+P+I APCEAEA
Sbjct: 124 GNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHI---------------TAPCEAEAS 168
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G+VYA TEDMDALTFG +L R+
Sbjct: 169 CAELAKGGRVYAAGTEDMDALTFGVPVLYRR 199
>gi|354503001|ref|XP_003513570.1| PREDICTED: flap endonuclease 1-like [Cricetulus griseus]
Length = 380
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L L G +E DKF++RLV+V+ H ECK+LL LMGIPY+E
Sbjct: 110 QLQQALDAGAQEEADKFSKRLVKVTKEHNDECKQLLRLMGIPYLE--------------- 154
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEA CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 155 APGEAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|317376212|sp|B2VTT3.2|FEN1_PYRTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ + GKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAALARGGKVYAAASEDMDTLTFDTPILLRH 193
>gi|431910392|gb|ELK13465.1| Flap endonuclease 1 [Pteropus alecto]
Length = 381
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GTEEDVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|189191944|ref|XP_001932311.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973917|gb|EDU41416.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 395
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ + GKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAALARGGKVYAAASEDMDTLTFDTPILLRH 193
>gi|452004834|gb|EMD97290.1| hypothetical protein COCHEDRAFT_1220743 [Cochliobolus
heterostrophus C5]
Length = 395
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTKEHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ K GKVYA A+EDMD LTF + ILLR
Sbjct: 162 QCAALAKGGKVYAAASEDMDTLTFASPILLRH 193
>gi|330914981|ref|XP_003296859.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
gi|311330789|gb|EFQ95031.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIPYI +AP EAEA
Sbjct: 64 TGTAEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYI---------------VAPTEAEA 108
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ + GKVYA A+EDMD LTF T ILLR
Sbjct: 109 QCAALARGGKVYAAASEDMDTLTFDTPILLRH 140
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL +G+A +++K++RRLV+V+ H+ +CK+LL LMGIP +E
Sbjct: 110 ELAKAQESGEAADVEKYSRRLVKVTREHMDDCKKLLRLMGIPVVE--------------- 154
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCA++VK+GKVYATATEDMDALTF ++ LLR
Sbjct: 155 APTEAEAQCASLVKSGKVYATATEDMDALTFHSSRLLRH 193
>gi|410974093|ref|XP_003993482.1| PREDICTED: flap endonuclease 1 [Felis catus]
Length = 380
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAA 165
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 166 LVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|301781710|ref|XP_002926265.1| PREDICTED: flap endonuclease 1-like [Ailuropoda melanoleuca]
gi|281345366|gb|EFB20950.1| hypothetical protein PANDA_015901 [Ailuropoda melanoleuca]
Length = 380
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMG+PY++ AP EAEA
Sbjct: 118 GVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|449283444|gb|EMC90086.1| Flap endonuclease 1 [Columba livia]
Length = 382
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ I+K+++RLV+V+ H ECK+LL+LMGIPY+E AP EAEA
Sbjct: 118 GEENNIEKYSKRLVKVTQQHNDECKKLLTLMGIPYLE---------------APGEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|81883819|sp|Q5XIP6.1|FEN1_RAT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53733451|gb|AAH83630.1| Fen1 protein [Rattus norvegicus]
gi|149062370|gb|EDM12793.1| flap structure-specific endonuclease 1 [Rattus norvegicus]
Length = 380
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|16758170|ref|NP_445882.1| flap endonuclease 1 [Rattus norvegicus]
gi|8896169|gb|AAF81265.1|AF281018_1 flag structure-specific endonuclease [Rattus norvegicus]
Length = 380
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E +KF RRLV+V+ E K LL LMGIP +E APCEAEAQ
Sbjct: 118 GDVKEAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVE---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA +VKAGKV+ T TEDMDALTFG+ +LLR L+
Sbjct: 163 CAHLVKAGKVFGTVTEDMDALTFGSTVLLRHFLA 196
>gi|311247497|ref|XP_003122676.1| PREDICTED: flap endonuclease 1-like isoform 2 [Sus scrofa]
Length = 393
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E++KF +RLV+V+ H ECK LLSLMG+PY++ AP EAEA CAA
Sbjct: 134 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLD---------------APSEAEASCAA 178
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 179 LVKAGKVYAAATEDMDCLTFGSPVLMRH 206
>gi|261244970|ref|NP_001159668.1| flap endonuclease 1 [Ovis aries]
gi|317376193|sp|C8BKD0.1|FEN1_SHEEP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256665367|gb|ACV04829.1| flap structure-specific endonuclease 1 [Ovis aries]
Length = 380
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+
Sbjct: 122 EVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAAL 166
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 167 VKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|311247499|ref|XP_003122675.1| PREDICTED: flap endonuclease 1-like isoform 1 [Sus scrofa]
Length = 380
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E++KF +RLV+V+ H ECK LLSLMG+PY++ AP EAEA CAA
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLD---------------APSEAEASCAA 165
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 166 LVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|451853401|gb|EMD66695.1| hypothetical protein COCSADRAFT_35197 [Cochliobolus sativus ND90Pr]
Length = 395
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTKEHNAECQQLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + K GKVYA A+EDMD LTF + ILLR
Sbjct: 162 QCATLAKGGKVYAAASEDMDTLTFASPILLRH 193
>gi|26345786|dbj|BAC36544.1| unnamed protein product [Mus musculus]
Length = 411
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|729476|sp|P39749.1|FEN1_MOUSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|499649|gb|AAC37664.1| endonuclease-1 [Mus musculus]
Length = 378
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 116 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 161 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 191
>gi|26335423|dbj|BAC31412.1| unnamed protein product [Mus musculus]
Length = 380
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|20071071|gb|AAH27295.1| Fen1 protein [Mus musculus]
Length = 380
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|46048490|ref|NP_032025.2| flap endonuclease 1 [Mus musculus]
gi|410025484|ref|NP_001258543.1| flap endonuclease 1 [Mus musculus]
gi|410025486|ref|NP_001258544.1| flap endonuclease 1 [Mus musculus]
gi|16307328|gb|AAH10203.1| Flap structure specific endonuclease 1 [Mus musculus]
gi|26337949|dbj|BAC32660.1| unnamed protein product [Mus musculus]
gi|26347483|dbj|BAC37390.1| unnamed protein product [Mus musculus]
gi|53791234|dbj|BAD52443.1| flap endonuclease 1 [Mus musculus]
gi|74145457|dbj|BAE36169.1| unnamed protein product [Mus musculus]
gi|74150381|dbj|BAE32236.1| unnamed protein product [Mus musculus]
gi|74185061|dbj|BAE39135.1| unnamed protein product [Mus musculus]
gi|148709396|gb|EDL41342.1| flap structure specific endonuclease 1, isoform CRA_c [Mus
musculus]
Length = 380
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|148709395|gb|EDL41341.1| flap structure specific endonuclease 1, isoform CRA_b [Mus
musculus]
Length = 432
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 170 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 214
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 215 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 245
>gi|13506617|gb|AAK01853.1| flap endonuclease-1 [Mus musculus]
Length = 378
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 116 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 161 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 191
>gi|116203453|ref|XP_001227537.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175738|gb|EAQ83206.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 378
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIPYI LAP EAEA
Sbjct: 100 TGTAEDVEKFSRRTVRVTREHNEECQRLLKLMGIPYI---------------LAPTEAEA 144
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 145 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 176
>gi|148709394|gb|EDL41340.1| flap structure specific endonuclease 1, isoform CRA_a [Mus
musculus]
Length = 396
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 134 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 178
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 179 CAALAKAGKVYAAATEDMDCLTFGSPVLMRH 209
>gi|224050601|ref|XP_002192880.1| PREDICTED: flap endonuclease 1 [Taeniopygia guttata]
Length = 386
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I+K+++RLV+V+ H +ECK+LL+LMGIPY+E AP EAEA CAA+V
Sbjct: 123 IEKYSKRLVKVTPQHTQECKKLLTLMGIPYVE---------------APGEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ I+KF++RLV+V+ H ECK+LL LMGIPY+E AP EAEA
Sbjct: 118 GEEANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVE---------------APGEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CATLVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|326919868|ref|XP_003206199.1| PREDICTED: flap endonuclease 1-like [Meleagris gallopavo]
Length = 381
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ I+KF++RLV+V+ H ECK+LL LMGIPY+E AP EAEA
Sbjct: 118 GEETNIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVE---------------APGEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CATLVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ I+KF++RLV+V+ H ECK+LL LMGIPY+E AP EAEA
Sbjct: 118 GEEANIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVE---------------APGEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VKAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 163 CATLVKAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium
dendrobatidis JAM81]
Length = 388
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
E L TGD + ++F+RR V+V+ +EC+ LL LMGIP +E
Sbjct: 111 EADTALETGDTENFNRFSRRTVKVTKEQNQECRRLLKLMGIPIVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
APCEAEAQCAA+ KAGKVYA +EDMD LTFG +LLR
Sbjct: 156 APCEAEAQCAALAKAGKVYAAGSEDMDTLTFGAPVLLRH 194
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 71/112 (63%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT L TG+ +EI+KF++R V+V+ H ++CK+LL LMG+P IE
Sbjct: 111 DLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEAQCAA+ K+GKVYA A+EDMD+LTFG LR + ++ + E
Sbjct: 156 APSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRHLMDPSSRKIPVME 207
>gi|402580560|gb|EJW74510.1| hypothetical protein WUBG_14580, partial [Wuchereria bancrofti]
Length = 266
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++KF RRLV+V+ +E K L++LMGIP ++ APCEAEAQ
Sbjct: 118 GDEASVNKFERRLVKVTKEQNEEAKRLVTLMGIPILD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CAA+ KAGKV+AT +EDMDALTFG+ ILLRQ ++
Sbjct: 163 CAALAKAGKVFATVSEDMDALTFGSPILLRQMIA 196
>gi|327278874|ref|XP_003224185.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Anolis
carolinensis]
Length = 515
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++KF++RLV+V+ H +ECK+LL+LMGIPY++ AP EAEA
Sbjct: 251 GEEENVEKFSKRLVKVTKQHNEECKKLLTLMGIPYVD---------------APGEAEAS 295
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+VKA KVYA ATEDMD LTFG+ +L+R
Sbjct: 296 CAALVKANKVYAAATEDMDCLTFGSPVLMRH 326
>gi|310800740|gb|EFQ35633.1| XPG domain-containing protein [Glomerella graminicola M1.001]
Length = 394
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +C++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNADCQKLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFDTPILLRH 193
>gi|345569735|gb|EGX52564.1| hypothetical protein AOL_s00007g552 [Arthrobotrys oligospora ATCC
24927]
Length = 390
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+EI+KF+RR VR + H +ECK LL LMGIPY++ APCEAEAQ
Sbjct: 118 GTAEEIEKFSRRTVRATREHNEECKRLLKLMGIPYLD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K+GKVYA A+EDMD L F T ILLR
Sbjct: 163 CAILAKSGKVYAAASEDMDTLCFETPILLRH 193
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT L TG+ +EI+KF++R V+V+ H ++CK+LL LMG+P IE
Sbjct: 127 DLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIE--------------- 171
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ K+GKVYA A+EDMD+LTFG + LR
Sbjct: 172 APSEAEAQCAALCKSGKVYAVASEDMDSLTFGASKFLRH 210
>gi|317374948|sp|Q0UZR3.3|FEN1_PHANO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 396
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIP+I +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECRRLLKLMGIPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCATLARGGKVYAAASEDMDTLTFNTPILLRH 193
>gi|296089863|emb|CBI39682.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT L TG+ +EI+KF++R V+V+ H ++CK+LL LMG+P IE
Sbjct: 111 DLTEALETGNKEEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ K+GKVYA A+EDMD+LTFG LR
Sbjct: 156 APSEAEAQCAALCKSGKVYAVASEDMDSLTFGAPKFLRH 194
>gi|169599851|ref|XP_001793348.1| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
gi|160705335|gb|EAT89482.2| hypothetical protein SNOG_02751 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIP+I +AP EAEA
Sbjct: 98 TGTAEDVEKFSRRTVRVTREHNEECRRLLKLMGIPFI---------------IAPTEAEA 142
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA A+EDMD LTF T ILLR
Sbjct: 143 QCATLARGGKVYAAASEDMDTLTFNTPILLRH 174
>gi|303312977|ref|XP_003066500.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106162|gb|EER24355.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 359
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMGIPYI+ AP EAEA
Sbjct: 81 TGTAEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYID---------------APTEAEA 125
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 126 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 157
>gi|61365237|gb|AAX42675.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61365242|gb|AAX42676.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61369466|gb|AAX43341.1| flap structure-specific endonuclease 1 [synthetic construct]
Length = 381
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|380479712|emb|CCF42855.1| XPG domain-containing protein [Colletotrichum higginsianum]
Length = 394
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR VRV+ H +C++LL LMGIP+I +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVRVTREHNADCQKLLKLMGIPFI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFDTPILLRH 193
>gi|320036635|gb|EFW18574.1| flap endonuclease [Coccidioides posadasii str. Silveira]
gi|392864029|gb|EAS35174.2| flap endonuclease 1 [Coccidioides immitis RS]
Length = 395
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|358369087|dbj|GAA85702.1| DNA-repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 395
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFETPILLRH 193
>gi|388454741|ref|NP_001252879.1| flap endonuclease 1 [Macaca mulatta]
gi|402893159|ref|XP_003909769.1| PREDICTED: flap endonuclease 1 isoform 1 [Papio anubis]
gi|402893161|ref|XP_003909770.1| PREDICTED: flap endonuclease 1 isoform 2 [Papio anubis]
gi|75076152|sp|Q4R5U5.1|FEN1_MACFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|67970375|dbj|BAE01530.1| unnamed protein product [Macaca fascicularis]
gi|355566422|gb|EHH22801.1| Flap endonuclease 1 [Macaca mulatta]
gi|355752043|gb|EHH56163.1| Flap endonuclease 1 [Macaca fascicularis]
gi|380787489|gb|AFE65620.1| flap endonuclease 1 [Macaca mulatta]
gi|383413161|gb|AFH29794.1| flap endonuclease 1 [Macaca mulatta]
gi|384939550|gb|AFI33380.1| flap endonuclease 1 [Macaca mulatta]
Length = 380
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|332249905|ref|XP_003274094.1| PREDICTED: flap endonuclease 1 isoform 1 [Nomascus leucogenys]
gi|332249907|ref|XP_003274095.1| PREDICTED: flap endonuclease 1 isoform 2 [Nomascus leucogenys]
gi|441604271|ref|XP_004087863.1| PREDICTED: flap endonuclease 1 [Nomascus leucogenys]
Length = 380
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|194377686|dbj|BAG63206.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 87 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 131
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 132 KAGKVYAAATEDMDCLTFGSPVLMRH 157
>gi|145245469|ref|XP_001395002.1| DNA repair protein rad2 [Aspergillus niger CBS 513.88]
gi|317374885|sp|A5ABU3.1|FEN1_ASPNC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134079702|emb|CAK97128.1| unnamed protein product [Aspergillus niger]
Length = 395
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFETPILLRH 193
>gi|4758356|ref|NP_004102.1| flap endonuclease 1 [Homo sapiens]
gi|114637922|ref|XP_001149352.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan troglodytes]
gi|297688500|ref|XP_002821719.1| PREDICTED: flap endonuclease 1 isoform 1 [Pongo abelii]
gi|297688502|ref|XP_002821720.1| PREDICTED: flap endonuclease 1 isoform 2 [Pongo abelii]
gi|332836633|ref|XP_001149490.2| PREDICTED: flap endonuclease 1 isoform 4 [Pan troglodytes]
gi|397516600|ref|XP_003828512.1| PREDICTED: flap endonuclease 1 isoform 1 [Pan paniscus]
gi|397516602|ref|XP_003828513.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan paniscus]
gi|410045196|ref|XP_003951955.1| PREDICTED: flap endonuclease 1 [Pan troglodytes]
gi|426368750|ref|XP_004051365.1| PREDICTED: flap endonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426368752|ref|XP_004051366.1| PREDICTED: flap endonuclease 1 isoform 2 [Gorilla gorilla gorilla]
gi|426368754|ref|XP_004051367.1| PREDICTED: flap endonuclease 1 isoform 3 [Gorilla gorilla gorilla]
gi|729475|sp|P39748.1|FEN1_HUMAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNase
IV; AltName: Full=Flap structure-specific endonuclease
1; AltName: Full=Maturation factor 1; Short=MF1;
Short=hFEN-1
gi|21668123|gb|AAM74238.1|AF523117_1 flap structure-specific endonuclease 1 [Homo sapiens]
gi|642090|gb|AAA91331.1| endonuclease [Homo sapiens]
gi|704377|gb|AAB32522.1| DNase IV=nuclear 42 kda 5' -> 3' exonuclease [human, HeLa cells,
Peptide, 380 aa]
gi|3169155|gb|AAC23394.1| FEN1_HUMAN [Homo sapiens]
gi|3980293|emb|CAA54166.1| flap endonuclease-1 [Homo sapiens]
gi|12653113|gb|AAH00323.1| Flap structure-specific endonuclease 1 [Homo sapiens]
gi|49168608|emb|CAG38799.1| FEN1 [Homo sapiens]
gi|54695918|gb|AAV38331.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|60813555|gb|AAX36265.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|60813577|gb|AAX36266.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355090|gb|AAX41100.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355958|gb|AAX41194.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61362985|gb|AAX42314.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|119594378|gb|EAW73972.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|189053461|dbj|BAG35627.1| unnamed protein product [Homo sapiens]
gi|208968397|dbj|BAG74037.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|410220904|gb|JAA07671.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410267972|gb|JAA21952.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410301536|gb|JAA29368.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410335329|gb|JAA36611.1| flap structure-specific endonuclease 1 [Pan troglodytes]
Length = 380
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|407916553|gb|EKG09919.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 392
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF + +LLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFNSPVLLRH 193
>gi|61680058|pdb|1UL1|X Chain X, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680059|pdb|1UL1|Y Chain Y, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680060|pdb|1UL1|Z Chain Z, Crystal Structure Of The Human Fen1-Pcna Complex
Length = 379
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 122 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 166
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 167 KAGKVYAAATEDMDCLTFGSPVLMRH 192
>gi|403255047|ref|XP_003920260.1| PREDICTED: flap endonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255049|ref|XP_003920261.1| PREDICTED: flap endonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|347838761|emb|CCD53333.1| similar to flap endonuclease 1 [Botryotinia fuckeliana]
Length = 395
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAALARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|350631707|gb|EHA20078.1| hypothetical protein ASPNIDRAFT_48158 [Aspergillus niger ATCC 1015]
Length = 359
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 81 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 125
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 126 QCAVLARAGKVYAAASEDMDTLCFETPILLRH 157
>gi|296218462|ref|XP_002755459.1| PREDICTED: flap endonuclease 1 [Callithrix jacchus]
Length = 380
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 123 VEKFTKRLVKVTKQHNDECKRLLSLMGIPYLD---------------APSEAEASCAALV 167
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 168 KAGKVYAAATEDMDCLTFGSPVLMRH 193
>gi|330689547|pdb|3Q8K|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Product 5'-Flap Dna, Sm3+, And K+
gi|330689551|pdb|3Q8L|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Substrate 5'-Flap Dna, Sm3+, And K+
Length = 341
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 122 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 166
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDMD LTFG+ +L+R
Sbjct: 167 KAGKVYAAATEDMDCLTFGSPVLMRH 192
>gi|378733116|gb|EHY59575.1| flap endonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 395
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR VRV+ H +EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVRVTREHNEECRRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNAPILLRH 193
>gi|154292277|ref|XP_001546714.1| hypothetical protein BC1G_14593 [Botryotinia fuckeliana B05.10]
Length = 302
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 129 TGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 173
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ +AGKVYA A+EDMD L F + ILLR
Sbjct: 174 QCAALARAGKVYAAASEDMDTLCFDSPILLRH 205
>gi|302415469|ref|XP_003005566.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
gi|261354982|gb|EEY17410.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
Length = 308
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC++LL LMG+P+I +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQKLLRLMGVPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + K GKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAVLAKGGKVYAAASEDMDTLTFETPILLRH 193
>gi|429854713|gb|ELA29705.1| DNA-repair protein rad2 [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIP+I +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFDTPILLRH 193
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++++KF+RR VR++ H +ECK+LL LMGIPY++ APCEAEAQCAA
Sbjct: 122 EDMNKFSRRTVRMTREHNEECKKLLKLMGIPYVD---------------APCEAEAQCAA 166
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ KAGKVYA A+EDMD L F T ILLR
Sbjct: 167 LAKAGKVYAAASEDMDILCFSTPILLRH 194
>gi|346976080|gb|EGY19532.1| DNA-repair protein rad2 [Verticillium dahliae VdLs.17]
Length = 394
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC++LL LMG+P+I +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQKLLKLMGVPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + K GKVYA A+EDMD LTF T ILLR
Sbjct: 162 QCAVLAKGGKVYAAASEDMDTLTFETPILLRH 193
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++KF +RLV+V+ +E K L++LMGIP ++ APCEAEAQ
Sbjct: 118 GDETSVNKFEKRLVKVTKEQSEEAKRLVTLMGIPVLD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CAA+ KAGKV+AT +EDMDALTFG+ ILLRQ ++
Sbjct: 163 CAALAKAGKVFATVSEDMDALTFGSPILLRQMIA 196
>gi|121704724|ref|XP_001270625.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398771|gb|EAW09199.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 401
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+EI+KF+RR VRV+ H ECK+LL LMG+PYI+ AP EAEA
Sbjct: 123 TGTAEEIEKFSRRTVRVTREHNAECKKLLKLMGVPYID---------------APTEAEA 167
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 168 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 199
>gi|240273940|gb|EER37459.1| DNA repair protein RAD2 [Ajellomyces capsulatus H143]
Length = 519
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEAQ
Sbjct: 242 GTAEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEAQ 286
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 287 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 317
>gi|317374931|sp|A1CJ75.2|FEN1_ASPCL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+EI+KF+RR VRV+ H ECK+LL LMG+PYI+ AP EAEA
Sbjct: 117 TGTAEEIEKFSRRTVRVTREHNAECKKLLKLMGVPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|171679661|ref|XP_001904777.1| hypothetical protein [Podospora anserina S mat+]
gi|170939456|emb|CAP64684.1| unnamed protein product [Podospora anserina S mat+]
Length = 379
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR VRV+ H EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVRVTREHNAECQKLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|395330939|gb|EJF63321.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 429
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++D+F+RR V+V+ H +EC++LL+LMGIP+ V+AP EAEA
Sbjct: 136 TGTAEDVDRFSRRTVKVTREHNEECRKLLTLMGIPF---------------VVAPSEAEA 180
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTFG ILLR
Sbjct: 181 QCAELARGGKVYAAGSEDMDTLTFGAPILLRH 212
>gi|358394482|gb|EHK43875.1| hypothetical protein TRIATDRAFT_300264 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|340966641|gb|EGS22148.1| hypothetical protein CTHT_0016650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 395
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|358385848|gb|EHK23444.1| hypothetical protein TRIVIDRAFT_37094 [Trichoderma virens Gv29-8]
Length = 395
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|225555317|gb|EEH03609.1| DNA-repair protein rad2 [Ajellomyces capsulatus G186AR]
Length = 359
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEAQ
Sbjct: 82 GTAEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEAQ 126
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 127 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 157
>gi|340518918|gb|EGR49158.1| Rad27p/FEN-1 endonuclease-like protein [Trichoderma reesei QM6a]
Length = 395
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|325094624|gb|EGC47934.1| DNA repair protein RAD2 [Ajellomyces capsulatus H88]
Length = 359
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEAQ
Sbjct: 82 GTAEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEAQ 126
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 127 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 157
>gi|154286840|ref|XP_001544215.1| flap endonuclease [Ajellomyces capsulatus NAm1]
gi|317374874|sp|A6QV55.1|FEN1_AJECN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150407856|gb|EDN03397.1| flap endonuclease [Ajellomyces capsulatus NAm1]
Length = 395
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEAQ
Sbjct: 118 GTAEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 163 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|317374936|sp|C6HQJ2.2|FEN1_AJECH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEAQ
Sbjct: 118 GTAEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 163 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|440633913|gb|ELR03832.1| flap endonuclease-1 [Geomyces destructans 20631-21]
Length = 395
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRVS H EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVSRQHNAECQQLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + IL+R
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFDSPILIRH 193
>gi|444513068|gb|ELV10260.1| Flap endonuclease 1 [Tupaia chinensis]
Length = 380
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF++RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFSKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|396499081|ref|XP_003845386.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
gi|312221967|emb|CBY01907.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
Length = 423
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC+ LL LMGIP+I +AP EAEA
Sbjct: 145 TGTAEDVEKFSRRTVRVTREHNEECRRLLKLMGIPFI---------------VAPTEAEA 189
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA A+EDMD LTF + ILLR
Sbjct: 190 QCAVLARGGKVYAAASEDMDTLTFNSPILLRH 221
>gi|400598682|gb|EJP66391.1| DNA-repair protein rad2 [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLAKAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D + I+KF++RLV+V+ H ++CK+LL LMG+P++ AP EAEAQC
Sbjct: 119 DLEAIEKFSKRLVKVTPAHNEDCKQLLRLMGVPFVN---------------APGEAEAQC 163
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AA+ K+GKVYA TEDMDAL FGT +LLR
Sbjct: 164 AALAKSGKVYAVGTEDMDALAFGTPVLLRH 193
>gi|336259381|ref|XP_003344492.1| hypothetical protein SMAC_08742 [Sordaria macrospora k-hell]
gi|317376194|sp|D1ZT73.1|FEN1_SORMK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|380087456|emb|CCC05373.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 394
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFHTPILLRH 193
>gi|367047833|ref|XP_003654296.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
gi|347001559|gb|AEO67960.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
Length = 359
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 81 TGTAEDVEKFSRRTVRVTKEHNAECQRLLRLMGIPYI---------------VAPTEAEA 125
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 126 QCAVLARAGKVYAAASEDMDTLCFDTPILLRH 157
>gi|46138549|ref|XP_390965.1| hypothetical protein FG10789.1 [Gibberella zeae PH-1]
gi|408391605|gb|EKJ70977.1| hypothetical protein FPSE_08836 [Fusarium pseudograminearum CS3096]
Length = 395
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H +C+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNADCQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLAQAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL G+ ++I+KF RRLV+VS H + + LL+LMG+P++ +
Sbjct: 110 ELDKATEVGNQEDINKFQRRLVKVSKQHNADAQRLLALMGVPFL---------------V 154
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
APCEAEAQCA +VKA KVYA ATEDMD LTFG ++LLR
Sbjct: 155 APCEAEAQCAELVKAQKVYAAATEDMDCLTFGASVLLRH 193
>gi|295663294|ref|XP_002792200.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279375|gb|EEH34941.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 381
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMGIPYI+ AP EAEAQ
Sbjct: 104 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYID---------------APTEAEAQ 148
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 149 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 179
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++KF +RLV+V+ H +EC+ LL LMG+PY++ AP EAEAQ
Sbjct: 118 GDQENMNKFEKRLVKVTKQHNEECQHLLKLMGVPYVK---------------APGEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
C +VK GK+Y TEDMDALTFG N+LLR
Sbjct: 163 CCELVKKGKLYGVGTEDMDALTFGGNVLLRH 193
>gi|225685184|gb|EEH23468.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb03]
Length = 359
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMGIPYI+ AP EAEAQ
Sbjct: 82 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYID---------------APTEAEAQ 126
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 127 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 157
>gi|312082398|ref|XP_003143428.1| flap endonuclease-1 [Loa loa]
gi|307761410|gb|EFO20644.1| flap endonuclease-1 [Loa loa]
Length = 345
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++KF RRLV+V+ +E K L++LMGIP ++ APCEAEAQ
Sbjct: 118 GDEASVNKFARRLVKVTKEQNEEAKRLVTLMGIPVLD---------------APCEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CAA+ +AGKV+AT +EDMDALTFG+ ILLRQ ++
Sbjct: 163 CAALARAGKVFATVSEDMDALTFGSPILLRQMIA 196
>gi|74219985|dbj|BAE40572.1| unnamed protein product [Mus musculus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA
Sbjct: 118 GMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEAS 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA ATE MD LTFG+ +L+R
Sbjct: 163 CAALAKAGKVYAAATEGMDCLTFGSPVLMRH 193
>gi|351699147|gb|EHB02066.1| Flap endonuclease 1 [Heterocephalus glaber]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|440901464|gb|ELR52399.1| Flap endonuclease 1 [Bos grunniens mutus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|75057714|sp|Q58DH8.1|FEN1_BOVIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|61553325|gb|AAX46387.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61553832|gb|AAX46466.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61554710|gb|AAX46602.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|296471658|tpg|DAA13773.1| TPA: flap endonuclease 1 [Bos taurus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|226294510|gb|EEH49930.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb18]
Length = 528
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMGIPYI+ AP EAEAQ
Sbjct: 251 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYID---------------APTEAEAQ 295
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 296 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 326
>gi|75775305|gb|AAI05256.1| Flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|115402747|ref|XP_001217450.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
gi|114189296|gb|EAU30996.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
Length = 402
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 124 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 168
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 169 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 200
>gi|78042574|ref|NP_001030285.1| flap endonuclease 1 [Bos taurus]
gi|61553249|gb|AAX46374.1| flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|395852526|ref|XP_003798789.1| PREDICTED: flap endonuclease 1 [Otolemur garnettii]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|57099749|ref|XP_533271.1| PREDICTED: flap endonuclease 1 isoform 1 [Canis lupus familiaris]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|119493310|ref|XP_001263845.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|317374917|sp|A1D8A4.1|FEN1_NEOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119412005|gb|EAW21948.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|317374932|sp|B0XZ33.2|FEN1_ASPFC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|67524613|ref|XP_660368.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|74597180|sp|Q5B9L6.1|FEN1_EMENI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40744016|gb|EAA63198.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|259486319|tpe|CBF84062.1| TPA: 5' to 3' exonuclease, 5' flap endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|291409580|ref|XP_002721064.1| PREDICTED: flap structure-specific endonuclease 1 [Oryctolagus
cuniculus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|379991146|ref|NP_001244014.1| flap endonuclease 1 [Equus caballus]
Length = 380
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|317374927|sp|Q4WWJ1.2|FEN1_ASPFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|317374926|sp|Q0CBS0.2|FEN1_ASPTN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|302688649|ref|XP_003034004.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
gi|300107699|gb|EFI99101.1| hypothetical protein SCHCODRAFT_81803 [Schizophyllum commune H4-8]
Length = 452
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A E+DKF+RR V+V+ H +EC+ LL LMGIPY+E AP EAEA
Sbjct: 118 TGTAAEVDKFSRRQVKVTREHNEECRRLLKLMGIPYVE---------------APSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
>gi|302900157|ref|XP_003048206.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|317374915|sp|C7Z125.1|FEN1_NECH7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256729138|gb|EEU42493.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLAQAGKVYAAASEDMDTLCFNSPILLRH 193
>gi|238506000|ref|XP_002384202.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|317151109|ref|XP_001824453.2| DNA repair protein rad2 [Aspergillus oryzae RIB40]
gi|317374884|sp|B8NV37.1|FEN1_ASPFN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220690316|gb|EED46666.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|391868743|gb|EIT77953.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 395
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTRDHNAECKKLLKLMGIPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|83773193|dbj|BAE63320.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 359
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 81 TGTAEDVEKFSRRTVRVTRDHNAECKKLLKLMGIPYID---------------APTEAEA 125
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 126 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 157
>gi|296411549|ref|XP_002835493.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629277|emb|CAZ79650.1| unnamed protein product [Tuber melanosporum]
Length = 481
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ ECK LL+ MGIPY+E APCEAEAQ
Sbjct: 213 GTAEEVEKFSRRTVRVTKEINDECKRLLTCMGIPYVE---------------APCEAEAQ 257
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAGKVYA A++DMD L F T ILL++
Sbjct: 258 CAALAKAGKVYAAASDDMDTLCFETPILLKK 288
>gi|440470255|gb|ELQ39332.1| DNA-repair protein rad2 [Magnaporthe oryzae Y34]
gi|440487391|gb|ELQ67182.1| DNA-repair protein rad2 [Magnaporthe oryzae P131]
Length = 416
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECRQLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVFAAASEDMDTLCFDSPILLRH 193
>gi|389637772|ref|XP_003716519.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
gi|317374924|sp|A4QS18.2|FEN1_MAGO7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|351642338|gb|EHA50200.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNEECRQLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVFAAASEDMDTLCFDSPILLRH 193
>gi|159128014|gb|EDP53129.1| Flap endonuclease, putative [Aspergillus fumigatus A1163]
Length = 394
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 116 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 160
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 161 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 192
>gi|298706804|emb|CBJ29727.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 476
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL + D ++DKF++RLVRV+ H ++CK+LLSLMG+P V
Sbjct: 114 ELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPV---------------VT 158
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + G VY TATEDMDALTF T LLR+
Sbjct: 159 APSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRR 197
>gi|258573689|ref|XP_002541026.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
gi|237901292|gb|EEP75693.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
Length = 413
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H +ECK+LL LMGIPYI AP EAEA
Sbjct: 135 TGTTEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYIN---------------APTEAEA 179
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 180 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 211
>gi|317376210|sp|C4JDR3.2|FEN1_UNCRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H +ECK+LL LMGIPYI AP EAEA
Sbjct: 117 TGTTEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYIN---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|71000637|ref|XP_755000.1| Flap endonuclease Rad27 [Aspergillus fumigatus Af293]
gi|66852637|gb|EAL92962.1| Flap endonuclease Rad27, putative [Aspergillus fumigatus Af293]
Length = 394
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK+LL LMGIPYI+ AP EAEA
Sbjct: 116 TGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYID---------------APTEAEA 160
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 161 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 192
>gi|342882941|gb|EGU83505.1| hypothetical protein FOXB_05915 [Fusarium oxysporum Fo5176]
Length = 395
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLAQAGKVYAAASEDMDTLCFNAPILLRH 193
>gi|322700750|gb|EFY92503.1| DNA-repair protein rad2 [Metarhizium acridum CQMa 102]
Length = 426
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIP+I +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|430812753|emb|CCJ29874.1| unnamed protein product [Pneumocystis jirovecii]
Length = 225
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF+RR VR++ H +ECK+LL LMGIPY++ APCEAEAQCAA+
Sbjct: 1 MNKFSRRTVRMTREHNEECKKLLKLMGIPYVD---------------APCEAEAQCAALA 45
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA A+EDMD L F T ILLR
Sbjct: 46 KAGKVYAAASEDMDILCFSTPILLRH 71
>gi|355688549|gb|AER98539.1| flap structure-specific endonuclease 1 [Mustela putorius furo]
Length = 379
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H ECK LLSLMG+PY++ AP EAEA CAA+VKA
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGVPYLD---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|242813984|ref|XP_002486279.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
gi|218714618|gb|EED14041.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC
10500]
Length = 399
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEA
Sbjct: 121 TGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEA 165
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 166 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 197
>gi|320590957|gb|EFX03398.1| DNA-repair protein rad2 [Grosmannia clavigera kw1407]
Length = 856
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC+ LL LMGIP+I +AP EAEA
Sbjct: 579 TGTAEDIEKFSRRTVRVTREHNTECQRLLKLMGIPFI---------------VAPTEAEA 623
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 624 QCAELARAGKVYAAASEDMDTLCFNTPILLRH 655
>gi|212544870|ref|XP_002152589.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
gi|210065558|gb|EEA19652.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC
18224]
Length = 411
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEA
Sbjct: 133 TGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEA 177
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 178 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 209
>gi|317374921|sp|B6QT52.2|FEN1_PENMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEA
Sbjct: 117 TGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|322708426|gb|EFZ00004.1| DNA-repair protein rad2 [Metarhizium anisopliae ARSEF 23]
Length = 395
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIP+I +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F T ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNTPILLRH 193
>gi|388583596|gb|EIM23897.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 433
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TGDA+ ID+ +RR VRV+ H EC++LL LMGIP +E AP EAEA
Sbjct: 118 TGDAETIDRLSRRTVRVTKEHNMECRKLLRLMGIPVVE---------------APSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA +V+ GKV+A +EDMD LTFG ILLR
Sbjct: 163 QCAELVRGGKVWAAGSEDMDTLTFGAPILLRH 194
>gi|317376211|sp|B8MNF2.2|FEN1_TALSN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +ECK+LL LMG+PYI+ AP EAEA
Sbjct: 117 TGTAEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYID---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFEAPILLRH 193
>gi|164426998|ref|XP_001728355.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
gi|157071561|gb|EDO65264.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
Length = 396
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC++LL LMGIPYI +AP EAEA
Sbjct: 119 TGTAEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYI---------------VAPTEAEA 163
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 164 QCAVLARAGKVYAAASEDMDTLCFNAPILLRH 195
>gi|317374923|sp|A7UW97.2|FEN1_NEUCR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 394
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC++LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQKLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFNAPILLRH 193
>gi|425778472|gb|EKV16597.1| Flap endonuclease 1 [Penicillium digitatum PHI26]
gi|425784232|gb|EKV22023.1| Flap endonuclease 1 [Penicillium digitatum Pd1]
Length = 395
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H ECK+LL LMGIP+I AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECKKLLGLMGIPFIN---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFESPILLRH 193
>gi|261193829|ref|XP_002623320.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239588925|gb|EEQ71568.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239613756|gb|EEQ90743.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ER-3]
Length = 406
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMG+PYI AP EAEAQ
Sbjct: 129 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGVPYIN---------------APTEAEAQ 173
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 174 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 204
>gi|395545349|ref|XP_003774565.1| PREDICTED: flap endonuclease 1 [Sarcophilus harrisii]
Length = 380
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLV+V+ H +ECK LL LMGIPY+E AP EAEA CAA+VKA
Sbjct: 125 KFAKRLVKVTKQHNEECKRLLRLMGIPYLE---------------APSEAEASCAALVKA 169
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA ATEDMD LTFG+ +L+R
Sbjct: 170 GKVYAAATEDMDCLTFGSPVLMRH 193
>gi|255945091|ref|XP_002563313.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|317374920|sp|B6HEM2.1|FEN1_PENCW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|211588048|emb|CAP86119.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 395
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H ECK+LL LMGIP+I AP EAEA
Sbjct: 117 TGTAEDIEKFSRRTVRVTREHNAECKKLLELMGIPFIN---------------APTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFESPILLRH 193
>gi|336467513|gb|EGO55677.1| DNA-repair protein rad2 [Neurospora tetrasperma FGSC 2508]
Length = 396
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 119 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------VAPTEAEA 163
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 164 QCAVLARAGKVYAAASEDMDTLCFNAPILLRH 195
>gi|350287839|gb|EGZ69075.1| DNA-repair protein rad2, partial [Neurospora tetrasperma FGSC 2509]
Length = 390
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL LMGIPYI +AP EAEA
Sbjct: 113 TGTAEDVEKFSRRTVRVTREHNAECQRLLKLMGIPYI---------------VAPTEAEA 157
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 158 QCAVLARAGKVYAAASEDMDTLCFNAPILLRH 189
>gi|327350064|gb|EGE78921.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ATCC 18188]
Length = 402
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMG+PYI AP EAEAQ
Sbjct: 125 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGVPYIN---------------APTEAEAQ 169
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 170 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 200
>gi|324514356|gb|ADY45841.1| Flap endonuclease 1-B [Ascaris suum]
Length = 320
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA ++KF RRLV+V+ +E K+LL LMG+P + APCEAEAQ
Sbjct: 54 GDAMAVEKFERRLVKVTKDQNEEAKKLLRLMGVPVFD---------------APCEAEAQ 98
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +V+AGKV+A ATEDMDAL FG+ LLRQ
Sbjct: 99 CAELVRAGKVFAAATEDMDALAFGSKRLLRQ 129
>gi|402080846|gb|EJT75991.1| DNA-repair protein rad2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 394
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR V V+ H +EC+ LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVHVTREHNEECRRLLKLMGIPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCAA+ +AGKV+A A+EDMD L F + +LLR
Sbjct: 162 QCAALARAGKVFAAASEDMDTLCFDSPVLLRH 193
>gi|317374933|sp|C5GPA7.2|FEN1_AJEDR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317374934|sp|C5JVG7.2|FEN1_AJEDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++++KF+RR VRV+ H +ECK+LL LMG+PYI AP EAEAQ
Sbjct: 118 GTAEDVEKFSRRTVRVTREHNEECKKLLKLMGVPYIN---------------APTEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 163 CAVLARAGKVYAAASEDMDTLCFDSPILLRH 193
>gi|452981413|gb|EME81173.1| hypothetical protein MYCFIDRAFT_189405 [Pseudocercospora fijiensis
CIRAD86]
Length = 393
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E++KF+RR VRV+ H +E + LL LMG+PYI +AP EAEAQ
Sbjct: 118 GTAEEVEKFSRRTVRVTREHNQEAQRLLKLMGVPYI---------------IAPTEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKVYA A+EDMD LTF + +LLR+
Sbjct: 163 CAVIARAGKVYAAASEDMDTLTFASPVLLRK 193
>gi|392566068|gb|EIW59244.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 406
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++D+F+RR V+V+ H +EC+ LL LMGIP+ V+AP EAEA
Sbjct: 118 TGTAEDMDRFSRRTVKVTREHNEECRRLLGLMGIPF---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTFG IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFGAPILYRH 194
>gi|347482295|gb|AEO98236.1| flap endonuclease-1 [Emiliania huxleyi virus 203]
gi|347601360|gb|AEP15846.1| flap structure-specific endonuclease 1 [Emiliania huxleyi virus
207]
gi|357972633|gb|AET97906.1| flap endonuclease-1 [Emiliania huxleyi virus 201]
Length = 358
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 15/98 (15%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
L+ LT DA E++K +R VR + H +E K++L+LMGIP I+ A
Sbjct: 109 LSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVIQ---------------A 153
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
PCEAEA CAA VK GK YATATEDMD+LTFG+ ++R
Sbjct: 154 PCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
>gi|330689555|pdb|3Q8M|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
gi|330689556|pdb|3Q8M|B Chain B, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a)
In Complex With Substrate 5'-Flap Dna And K+
Length = 341
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 15/86 (17%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
++KF +RLV+V+ H ECK LLSLMGIPY++ AP EAEA CAA+V
Sbjct: 122 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLD---------------APSEAEASCAALV 166
Query: 75 KAGKVYATATEDMDALTFGTNILLRQ 100
KAGKVYA ATEDM LTFG+ +L+R
Sbjct: 167 KAGKVYAAATEDMACLTFGSPVLMRH 192
>gi|58266500|ref|XP_570406.1| flap endonuclease [Cryptococcus neoformans var. neoformans JEC21]
gi|134111280|ref|XP_775782.1| hypothetical protein CNBD5110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818103|sp|P0CS61.1|FEN1_CRYNB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|338818104|sp|P0CS60.1|FEN1_CRYNJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|50258446|gb|EAL21135.1| hypothetical protein CNBD5110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226639|gb|AAW43099.1| flap endonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 453
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++DK RR VRV+ H +ECK+LLSLMGIP V AP EAEA
Sbjct: 118 TGTAEDVDKLARRQVRVTREHNEECKKLLSLMGIPV---------------VTAPGEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA +EDMD LTF + ILLR
Sbjct: 163 QCAELARAGKVYAAGSEDMDTLTFNSPILLRH 194
>gi|449299844|gb|EMC95857.1| hypothetical protein BAUCODRAFT_109503 [Baudoinia compniacensis
UAMH 10762]
Length = 393
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR VRV+ H E + LL LMG+P+I +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF + +LLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFNSPVLLRH 193
>gi|356575281|ref|XP_003555770.1| PREDICTED: flap endonuclease 1-like [Glycine max]
Length = 382
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L+ L T + ++I+KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLSEALETANKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEAQCAA+ KAGKVYA A+EDMD+LTFG+ LR + ++ + E
Sbjct: 156 APSEAEAQCAALCKAGKVYAVASEDMDSLTFGSPKFLRHLMDPSSKKIPVME 207
>gi|255543058|ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus communis]
gi|223548553|gb|EEF50044.1| flap endonuclease-1, putative [Ricinus communis]
Length = 345
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL + TG+ ++I+KF++R V+V+ H ++CK LL LMG+P IE
Sbjct: 73 ELAAAVETGNKEDIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIE--------------- 117
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEA+CAA+ K+GKVYA A+EDMD+LTFG LR
Sbjct: 118 APSEAEAECAALCKSGKVYAVASEDMDSLTFGAPRFLRH 156
>gi|405120385|gb|AFR95156.1| flap endonuclease [Cryptococcus neoformans var. grubii H99]
Length = 453
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++DK RR VRV+ H +ECK+LLSLMGIP V AP EAEA
Sbjct: 118 TGTAEDVDKLARRQVRVTREHNEECKKLLSLMGIPV---------------VTAPGEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA +EDMD LTF + ILLR
Sbjct: 163 QCAELARAGKVYAAGSEDMDTLTFNSPILLRH 194
>gi|73852488|ref|YP_293772.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|72415204|emb|CAI65441.1| putative endonuclease [Emiliania huxleyi virus 86]
gi|347481843|gb|AEO97829.1| flap endonuclease-1 [Emiliania huxleyi virus 84]
gi|347600467|gb|AEP14954.1| endonuclease [Emiliania huxleyi virus 88]
Length = 358
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 15/98 (15%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
L+ LT DA E++K +R VR + H +E K++L+LMGIP ++ A
Sbjct: 109 LSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQ---------------A 153
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
PCEAEA CAA VK GK YATATEDMD+LTFG+ ++R
Sbjct: 154 PCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 56/84 (66%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF++RLV+V+ H +CKELL LMG+PYI+ AP EAEAQCAA+ KA
Sbjct: 89 KFSKRLVKVTPQHNDDCKELLRLMGVPYIK---------------APGEAEAQCAALAKA 133
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA TEDMDAL FG +LLR
Sbjct: 134 GKVYAVGTEDMDALAFGCPVLLRH 157
>gi|283481241|emb|CAZ69357.1| putative endonuclease [Emiliania huxleyi virus 99B1]
Length = 358
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 15/98 (15%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
L+ LT DA E++K +R VR + H +E K++L+LMGIP ++ A
Sbjct: 109 LSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQ---------------A 153
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
PCEAEA CAA VK GK YATATEDMD+LTFG+ ++R
Sbjct: 154 PCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
>gi|453084814|gb|EMF12858.1| flap endonuclease [Mycosphaerella populorum SO2202]
Length = 393
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E+++F+RR VRV+ H E + LL LMG+PYI +AP EAEA
Sbjct: 117 TGTAEEVERFSRRTVRVTKEHNAEAQRLLKLMGVPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF +LLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFNAPVLLRH 193
>gi|452840124|gb|EME42062.1| hypothetical protein DOTSEDRAFT_174868 [Dothistroma septosporum
NZE10]
Length = 393
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+E++KF+RR VRV+ H E + LL LMG+P+I +AP EAEA
Sbjct: 117 TGTAEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD LTF + +LLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLTFDSPVLLRH 193
>gi|367031946|ref|XP_003665256.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
gi|347012527|gb|AEO60011.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
Length = 395
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++++KF+RR VRV+ H EC+ LL LMG+PYI +AP EAEA
Sbjct: 117 TGTSEDVEKFSRRTVRVTKEHNAECQRLLKLMGVPYI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F ILLR
Sbjct: 162 QCAVLARAGKVYAAASEDMDTLCFDAPILLRH 193
>gi|346322835|gb|EGX92433.1| DNA-repair protein rad2 [Cordyceps militaris CM01]
Length = 394
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL+LMGIP+I +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAECQRLLALMGIPFI---------------VAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+A A+EDMD L F + ILLR
Sbjct: 162 QCAVLAKAGKVFAAASEDMDTLCFDSPILLRH 193
>gi|321257144|ref|XP_003193485.1| flap endonuclease [Cryptococcus gattii WM276]
gi|317459955|gb|ADV21698.1| flap endonuclease, putative [Cryptococcus gattii WM276]
Length = 453
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++DK RR VRV+ H +ECK+LLSLMGIP V AP EAEA
Sbjct: 118 TGTAEDVDKLARRQVRVTREHNEECKKLLSLMGIPV---------------VTAPGEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA +EDMD LTF + ILLR
Sbjct: 163 QCAELARAGKVYAAGSEDMDTLTFHSPILLRH 194
>gi|384485605|gb|EIE77785.1| hypothetical protein RO3G_02489 [Rhizopus delemar RA 99-880]
Length = 496
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A ++ ++ +R V+V+S H ECK LL MGIPY+E APCEAEAQ
Sbjct: 285 GTAADVTRYTKRTVKVTSEHNNECKRLLKAMGIPYVE---------------APCEAEAQ 329
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA A+EDMD LTF ILLR
Sbjct: 330 CAELARGGKVYAAASEDMDTLTFKAPILLRH 360
>gi|392575628|gb|EIW68761.1| hypothetical protein TREMEDRAFT_69192 [Tremella mesenterica DSM
1558]
Length = 437
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++IDK RR VRV+ H +ECK+LL+LMGIP V AP EAEA
Sbjct: 118 TGTVEDIDKLARRQVRVTREHNEECKKLLALMGIPV---------------VTAPGEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA +EDMD LTF T ILLR
Sbjct: 163 QCAELARAGKVYAAGSEDMDTLTFSTPILLRH 194
>gi|347601761|gb|AEP16246.1| flap endonuclease 1 [Emiliania huxleyi virus 208]
Length = 358
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 15/98 (15%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
L+ LT DA E++K +R VR + H +E K++L+LMGIP ++ +
Sbjct: 109 LSELKLTDDATEVEKQEKRSVRATREHSEEVKKMLTLMGIPVVQ---------------S 153
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
PCEAEA CAA VK GK YATATEDMD+LTFG+ ++R
Sbjct: 154 PCEAEATCAAYVKTGKAYATATEDMDSLTFGSTYVIRH 191
>gi|392591810|gb|EIW81137.1| PIN domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 437
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++D+F+RR VRV+ H +EC+ LL LMGIP I +AP EAEA
Sbjct: 149 TGTAEDVDRFSRRTVRVTKEHNEECRRLLRLMGIPVI---------------VAPSEAEA 193
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF +LLR
Sbjct: 194 QCAELARGGKVYAAGSEDMDTLTFHAPVLLRH 225
>gi|449549056|gb|EMD40022.1| hypothetical protein CERSUDRAFT_132799 [Ceriporiopsis subvermispora
B]
Length = 409
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++++F RR V+V+ H +EC+ LL LMGIP+ V+AP EAEAQ
Sbjct: 119 GTAEDVERFTRRTVKVTKEHNEECRRLLGLMGIPF---------------VVAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTF + ILLR
Sbjct: 164 CAELARGGKVYAAGSEDMDTLTFASPILLRH 194
>gi|443924990|gb|ELU43928.1| FEN-1 endonuclease [Rhizoctonia solani AG-1 IA]
Length = 532
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVS-----RSPRLLPNFLGVLAPC 64
G A++++KF RR VRV+ H +EC++LL LMGIP + VS + L N V AP
Sbjct: 119 GTAEDVEKFARRTVRVTREHNEECRKLLKLMGIPCVVVSNIVLIHARAQLANTSIVQAPS 178
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEAQCA + + GKVYA +EDMD LTF +L R
Sbjct: 179 EAEAQCAELARGGKVYAAGSEDMDTLTFNAPVLYRH 214
>gi|296804544|ref|XP_002843124.1| DNA-repair protein rad2 [Arthroderma otae CBS 113480]
gi|317374914|sp|C5FZT5.1|FEN1_NANOT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238845726|gb|EEQ35388.1| DNA-repair protein rad2 [Arthroderma otae CBS 113480]
Length = 394
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H ECK LL LMGIPYI+ AP EAEA
Sbjct: 116 TGTAEDVEKFSRRTVRVTREHNAECKRLLKLMGIPYID---------------APTEAEA 160
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + K GKV+ A+EDMD L F +LLR
Sbjct: 161 QCAVLAKEGKVFGAASEDMDTLCFAAPVLLRH 192
>gi|213404252|ref|XP_002172898.1| DNA-repair protein rad2 [Schizosaccharomyces japonicus yFS275]
gi|317376192|sp|B6JYI7.1|FEN1_SCHJY RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|212000945|gb|EEB06605.1| DNA-repair protein rad2 [Schizosaccharomyces japonicus yFS275]
Length = 377
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+ +DKF +R VRV+ H E K+LL LMGIPY+ APCEAEAQ
Sbjct: 119 GTAEMVDKFAKRTVRVTRQHNDEAKKLLELMGIPYVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ +AGKVYA A+EDMD + F ILLR
Sbjct: 164 CAALARAGKVYAAASEDMDTMCFQAPILLRH 194
>gi|357441985|ref|XP_003591270.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480318|gb|AES61521.1| Flap endonuclease 1a [Medicago truncatula]
Length = 384
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 15/111 (13%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
LT L + ++I+KF++R V+V+ H +CK LL LMG+P +E A
Sbjct: 112 LTEALEADNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVE---------------A 156
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
P EAEAQCAA+ KAGKVYA A+EDMD+LTFG LR + ++ + E
Sbjct: 157 PSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVME 207
>gi|315047298|ref|XP_003173024.1| hypothetical protein MGYG_09092 [Arthroderma gypseum CBS 118893]
gi|311343410|gb|EFR02613.1| hypothetical protein MGYG_09092 [Arthroderma gypseum CBS 118893]
Length = 459
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 181 TGTTEDVEKFSRRTVRVTKEHNAECKRLLGLMGIPYLD---------------APTEAEA 225
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+ A+EDMD L F +LLR
Sbjct: 226 QCAVLAKAGKVFGAASEDMDTLCFAAPVLLRH 257
>gi|390603405|gb|EIN12797.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 384
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++D+F+RR V+V+ H +EC++LL LMGIP V+AP EAEA
Sbjct: 118 TGTAEDMDRFSRRTVKVTREHNEECRKLLRLMGIPV---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF ILLR
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILLRH 194
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA+ ++K+++R VRV+ H ++CK LL LMG+P +E AP EAEAQ
Sbjct: 119 GDAEAVEKYSKRSVRVTKEHNEDCKRLLRLMGVPVVE---------------APSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CA M KAG VY ATEDMDALTFG ++R ++ ++ ++ E
Sbjct: 164 CAEMAKAGLVYGLATEDMDALTFGAPRVIRHLMAPSSSNVPVQE 207
>gi|302504898|ref|XP_003014670.1| hypothetical protein ARB_07232 [Arthroderma benhamiae CBS 112371]
gi|291177976|gb|EFE33767.1| hypothetical protein ARB_07232 [Arthroderma benhamiae CBS 112371]
Length = 359
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 81 TGTTEDVEKFSRRTVRVTKEHNAECKRLLGLMGIPYLD---------------APTEAEA 125
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+ A+EDMD L F +LLR
Sbjct: 126 QCAVLAKAGKVFGAASEDMDTLCFAAPVLLRH 157
>gi|357441987|ref|XP_003591271.1| Flap endonuclease 1a [Medicago truncatula]
gi|355480319|gb|AES61522.1| Flap endonuclease 1a [Medicago truncatula]
Length = 369
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 15/111 (13%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
LT L + ++I+KF++R V+V+ H +CK LL LMG+P +E A
Sbjct: 97 LTEALEADNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVE---------------A 141
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
P EAEAQCAA+ KAGKVYA A+EDMD+LTFG LR + ++ + E
Sbjct: 142 PSEAEAQCAALCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVME 192
>gi|302652986|ref|XP_003018331.1| hypothetical protein TRV_07676 [Trichophyton verrucosum HKI 0517]
gi|291181960|gb|EFE37686.1| hypothetical protein TRV_07676 [Trichophyton verrucosum HKI 0517]
Length = 376
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 98 TGTTEDVEKFSRRTVRVTKEHNAECKRLLGLMGIPYLD---------------APTEAEA 142
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+ A+EDMD L F +LLR
Sbjct: 143 QCAVLAKAGKVFGAASEDMDTLCFAAPVLLRH 174
>gi|326470331|gb|EGD94340.1| flap endonuclease [Trichophyton tonsurans CBS 112818]
Length = 376
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 98 TGTTEDVEKFSRRTVRVTREHNAECKRLLGLMGIPYLD---------------APTEAEA 142
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+ A+EDMD L F +LLR
Sbjct: 143 QCAVLAKAGKVFGAASEDMDTLCFAAPVLLRH 174
>gi|398396234|ref|XP_003851575.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
gi|339471455|gb|EGP86551.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici
IPO323]
Length = 393
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H E + LL LMGIPYI +AP EAEA
Sbjct: 117 TGTAEDVEKFSRRTVRVTREHNAEAQRLLKLMGIPYI---------------IAPTEAEA 161
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKV+A A+EDMD LTF + +L+R+
Sbjct: 162 QCAVLARGGKVFAAASEDMDTLTFASPVLVRK 193
>gi|343172070|gb|AEL98739.1| endonuclease, partial [Silene latifolia]
gi|343172072|gb|AEL98740.1| endonuclease, partial [Silene latifolia]
Length = 325
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L+ + GD + I+KF++R V+V+ H ++CK+LL LMG+P +E
Sbjct: 111 DLSAAIEEGDKEGIEKFSKRTVKVTKQHNEDCKKLLGLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ K GKVYA A+EDMD+LTFG LR
Sbjct: 156 APSEAEAQCAALCKNGKVYAVASEDMDSLTFGACKFLRH 194
>gi|325186427|emb|CCA20932.1| flap endonuclease 1 putative [Albugo laibachii Nc14]
Length = 389
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ EID+F++RLV +S H ++CKELL LMG+P + APCEAEA
Sbjct: 123 GNLVEIDRFSKRLVHATSQHSQDCKELLRLMGVPVL---------------TAPCEAEAT 167
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K KVYA+ TEDMD LTFGT +L R+
Sbjct: 168 CATLAKHHKVYASGTEDMDVLTFGTPVLYRR 198
>gi|401888159|gb|EJT52124.1| flap endonuclease [Trichosporon asahii var. asahii CBS 2479]
Length = 359
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 58/92 (63%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++ID+ +RR VRV+ H +ECK LL LMGIP V AP EAEA
Sbjct: 59 TGTAEDIDRMSRRQVRVTKEHNEECKRLLGLMGIPC---------------VTAPGEAEA 103
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A +EDMD LTF T ILLR
Sbjct: 104 QCAELARAGKVFAAGSEDMDTLTFHTPILLRH 135
>gi|403162368|ref|XP_003322600.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172578|gb|EFP78181.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 387
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++IDK +RR V+V+ H +EC+ LL+LMGIP+ V+AP EAEA
Sbjct: 118 TGTTEDIDKLSRRTVKVTREHNEECRRLLTLMGIPW---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + G VY +EDMD LTFGT ILLR
Sbjct: 163 QCAELCRGGLVYGAGSEDMDTLTFGTPILLRH 194
>gi|326478513|gb|EGE02523.1| flap endonuclease [Trichophyton equinum CBS 127.97]
Length = 353
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 113 TGTTEDVEKFSRRTVRVTREHNAECKRLLGLMGIPYLD---------------APTEAEA 157
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + KAGKV+ A+EDMD L F +LLR
Sbjct: 158 QCAVLAKAGKVFGAASEDMDTLCFAAPVLLRH 189
>gi|406699180|gb|EKD02391.1| flap endonuclease [Trichosporon asahii var. asahii CBS 8904]
Length = 344
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 58/92 (63%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++ID+ +RR VRV+ H +ECK LL LMGIP V AP EAEA
Sbjct: 44 TGTAEDIDRMSRRQVRVTKEHNEECKRLLGLMGIPC---------------VTAPGEAEA 88
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A +EDMD LTF T ILLR
Sbjct: 89 QCAELARAGKVFAAGSEDMDTLTFHTPILLRH 120
>gi|358054307|dbj|GAA99233.1| hypothetical protein E5Q_05927 [Mixia osmundae IAM 14324]
Length = 389
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +EIDK +RR VRV+ H +EC+ LL LMGIP+I +AP EAEA
Sbjct: 118 TGTVEEIDKLSRRTVRVTKEHNEECQRLLKLMGIPFI---------------IAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + G VY T +EDMD LTF + I+LR
Sbjct: 163 QCAELCRGGLVYGTGSEDMDTLTFSSPIILRH 194
>gi|336365482|gb|EGN93832.1| hypothetical protein SERLA73DRAFT_188945 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378041|gb|EGO19200.1| hypothetical protein SERLADRAFT_479560 [Serpula lacrymans var.
lacrymans S7.9]
Length = 407
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++DKF+RR V+V+ H +EC+ LL LMGIP V+AP EAEAQ
Sbjct: 119 GTAEDMDKFSRRTVKVTREHNEECRRLLKLMGIPV---------------VVAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTF ILLR
Sbjct: 164 CAELARGGKVYAAGSEDMDTLTFSAPILLRH 194
>gi|449510827|ref|XP_004163772.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Cucumis
sativus]
Length = 382
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +I+KF++R V+V+ H +CK LL LMG+P IE AP EAEAQ
Sbjct: 119 GNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIE---------------APSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CAA+ K GKVYA A+EDMD+LTFG+ LR + ++ + E
Sbjct: 164 CAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVME 207
>gi|357132761|ref|XP_003567997.1| PREDICTED: flap endonuclease 1-A-like [Brachypodium distachyon]
Length = 380
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
ELT + TGD I++F++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 ELTKAVETGDTDAIERFSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
APCEAEAQCAA+ KVYA A+EDMD+LTFG +R + ++ + E
Sbjct: 156 APCEAEAQCAALCIKDKVYAVASEDMDSLTFGAPRFVRHLMDPSSRKIPIME 207
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L+ L T + ++I+KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLSEALETANKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEAQCAA+ KAGKVY +EDMD+LTFG LR + ++ + E
Sbjct: 156 APSEAEAQCAALCKAGKVYGVVSEDMDSLTFGAPKFLRHLMDPSSKKIPVME 207
>gi|389740276|gb|EIM81467.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 528
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++D+F+RR VRV+ H EC+ LL LMGIP V+AP EAEA
Sbjct: 118 TGTAEDVDRFSRRTVRVTREHNAECQRLLRLMGIPV---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF L R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFSAPTLFRH 194
>gi|449435964|ref|XP_004135764.1| PREDICTED: flap endonuclease 1-like [Cucumis sativus]
Length = 377
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +I+KF++R V+V+ H +CK LL LMG+P IE AP EAEAQ
Sbjct: 119 GNKDDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIE---------------APSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CAA+ K GKVYA A+EDMD+LTFG+ LR + ++ + E
Sbjct: 164 CAALCKLGKVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVME 207
>gi|327306185|ref|XP_003237784.1| flap endonuclease [Trichophyton rubrum CBS 118892]
gi|326460782|gb|EGD86235.1| flap endonuclease [Trichophyton rubrum CBS 118892]
Length = 447
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++++KF+RR VRV+ H ECK LL LMGIPY++ AP EAEA
Sbjct: 169 TGTTEDVEKFSRRTVRVTKEHNAECKRLLELMGIPYLD---------------APTEAEA 213
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+ A+EDMD L F +LLR
Sbjct: 214 QCAVLARAGKVFGAASEDMDTLCFAAPVLLRH 245
>gi|403414469|emb|CCM01169.1| predicted protein [Fibroporia radiculosa]
Length = 400
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++D+F+RR V+V+ H +EC+ LL LMGIP+ V+AP EAEA
Sbjct: 110 TGTTEDVDRFSRRTVKVTREHNEECRRLLGLMGIPF---------------VVAPSEAEA 154
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF +L R
Sbjct: 155 QCAELARGGKVYAAGSEDMDTLTFSAPVLYRH 186
>gi|123335114|ref|XP_001294157.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121871805|gb|EAX81227.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 335
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 16/104 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL + +GD + IDKF+RR V + V+ECK+LL +G+PY++
Sbjct: 79 ELEKAIESGDQEAIDKFSRRTVHLDKTQVEECKQLLECLGVPYVD--------------- 123
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWA 105
APCEAEA+CAA+ KAG V A ATEDMD+L F T L+R LS+
Sbjct: 124 APCEAEAECAALNKAGLVDAMATEDMDSLAFATPQLIR-HLSYG 166
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I+K+++R VRV+ H ECK LL LMG+P +E AP EAEAQ
Sbjct: 119 GDQEAIEKYSKRSVRVTREHNDECKRLLRLMGVPVVE---------------APTEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CA M K+G VY ATEDMDALTFG ++R ++ ++ ++ E
Sbjct: 164 CAEMAKSGLVYGLATEDMDALTFGAPRVIRHLMAPSSQNVPVQE 207
>gi|219125938|ref|XP_002183226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|317374908|sp|B7G7Y7.1|FEN1_PHATC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|217405501|gb|EEC45444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 421
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 16/99 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E DK ++RLVR + ++C++LL+LMG+P V APCEAEAQ
Sbjct: 123 GNVEEQDKQSKRLVRAGTKENEDCRKLLTLMGVPV---------------VTAPCEAEAQ 167
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFS 108
AA+ KAG VYAT TEDMDALTF T IL+R +L++A S
Sbjct: 168 AAALCKAGLVYATGTEDMDALTFATPILVR-KLTFANAS 205
>gi|317374947|sp|A8NQC2.3|FEN1_COPC7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 458
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++D+F+RR V+V+ H +EC++LL LMG+P V+AP EAEAQ
Sbjct: 119 GTAEDVDRFSRRTVKVTKQHNEECQKLLRLMGVPC---------------VIAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTF IL R
Sbjct: 164 CAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
>gi|299743075|ref|XP_001835524.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
gi|298405488|gb|EAU86309.2| flap endonuclease-1 [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++D+F+RR V+V+ H +EC++LL LMG+P V+AP EAEAQ
Sbjct: 83 GTAEDVDRFSRRTVKVTKQHNEECQKLLRLMGVPC---------------VIAPSEAEAQ 127
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTF IL R
Sbjct: 128 CAELARGGKVYAAGSEDMDTLTFNAPILFRH 158
>gi|170111659|ref|XP_001887033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|317374862|sp|B0DSN9.1|FEN11_LACBS RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|164638076|gb|EDR02356.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 394
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++D+F+RR V+V+ H +EC+ LL LMGIP V+AP EAEA
Sbjct: 118 TGTVEDVDRFSRRTVKVTREHNEECRRLLRLMGIPV---------------VIAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
>gi|440797493|gb|ELR18579.1| XPG Iregion domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 434
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + K +R V V+ H +ECK+LL LMGIP +E AP EAEAQ
Sbjct: 83 GDTETMRKLEKRTVHVTPKHNEECKKLLRLMGIPVVE---------------APTEAEAQ 127
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AGKV+AT +EDMD+LTF T ILLR
Sbjct: 128 CAELCRAGKVFATGSEDMDSLTFATPILLRH 158
>gi|406865692|gb|EKD18733.1| DNA-repair protein rad2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 460
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H EC+ LL MGIPYI +AP EAEA
Sbjct: 183 TGTAEDVEKFSRRTVRVTREHNAECQRLLKCMGIPYI---------------IAPTEAEA 227
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +A KVYA A+EDMD L F +LLR
Sbjct: 228 QCAVLARADKVYAAASEDMDTLCFDAPVLLRH 259
>gi|356927843|gb|AET42633.1| flap endonuclease-1 [Emiliania huxleyi virus 202]
Length = 358
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 15/98 (15%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
L+ +T D+ EI+K +R VR + +E K+LL+ MGIP ++ A
Sbjct: 109 LSELKVTDDSYEIEKQEKRSVRATREQSEEVKKLLTFMGIPVVQ---------------A 153
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
PCEAEA CAA VKAGK YATATEDMD+LTFG+ ++R
Sbjct: 154 PCEAEATCAAYVKAGKAYATATEDMDSLTFGSTHVIRH 191
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++++F RR V+V+ H +EC+ LL LMGIP V+AP EAEAQ
Sbjct: 119 GTAEDVERFTRRTVKVTREHNEECRRLLRLMGIPV---------------VIAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTFG IL R
Sbjct: 164 CAELARGGKVYAAGSEDMDTLTFGAPILYRH 194
>gi|409042314|gb|EKM51798.1| hypothetical protein PHACADRAFT_102664 [Phanerochaete carnosa
HHB-10118-sp]
Length = 384
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++D+F+RR V+V+ +EC+ LL+LMG+P+ V+AP EAEA
Sbjct: 118 TGTTEDVDRFSRRQVKVTREQNEECRRLLTLMGVPW---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF + ILLR
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNSAILLRH 194
>gi|344233741|gb|EGV65611.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 376
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A++I KF +R+VRVS H E K+LL LMGIPYI APCEAEAQ
Sbjct: 119 GSAEDILKFEKRMVRVSREHNDEAKKLLELMGIPYIN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKV+A A+EDMD + + LLR
Sbjct: 164 CAELARGGKVFAAASEDMDTICYSPPYLLRH 194
>gi|357624246|gb|EHJ75100.1| flap endonuclease-1 [Danaus plexippus]
Length = 424
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 61/136 (44%), Gaps = 60/136 (44%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD IDKFNRRLV+V+ H E ++LL LMGIP +E APCEAEAQ
Sbjct: 119 GDTASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVE---------------APCEAEAQ 163
Query: 70 CAAM---------------------------------------------VKAGKVYATAT 84
CA + VK GKVYA AT
Sbjct: 164 CAELTSEGNLVDGLTNPLLRRGPIPAAARARLPVTHTEVISGPPVGGVPVKGGKVYAVAT 223
Query: 85 EDMDALTFGTNILLRQ 100
EDMDALTFG N+LLR
Sbjct: 224 EDMDALTFGANVLLRH 239
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 15/97 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A++++K+++R VRV+ H +ECK LL LMG+P +E AP EAEAQ
Sbjct: 119 GNAEDVEKYSKRTVRVTREHNEECKRLLRLMGVPVLE---------------APSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CA + K G VY +TEDMD+LTFGT L+R ++ ++
Sbjct: 164 CAQLCKDGLVYGISTEDMDSLTFGTPKLIRHLMAPSS 200
>gi|393213357|gb|EJC98853.1| PIN domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 403
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A+++++F RR V+V+ H +EC++LL LMGIP V+AP EAEA
Sbjct: 118 TGTAEDMERFTRRQVKVTKEHNEECRKLLGLMGIPV---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILYRH 194
>gi|317376190|sp|D3BN56.1|FEN1_POLPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|281203217|gb|EFA77418.1| XPG [Polysphondylium pallidum PN500]
Length = 388
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+++++ KF +R + S +ECK+LL LMG+P ++ APCEAEAQ
Sbjct: 119 GNSEDVQKFQKRTISASRKQNEECKKLLELMGVPIVQ---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K GK +AT +EDMD+LT GT ILLR+
Sbjct: 164 CAELCKGGKAWATGSEDMDSLTLGTTILLRR 194
>gi|401424227|ref|XP_003876599.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492842|emb|CBZ28120.1| putative flap endonuclease-1 (FEN-1) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 395
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R VRVS + E K+LL LMGIP I+ AP EAEAQ
Sbjct: 122 GDDEMMEKMSKRTVRVSREQIDESKKLLRLMGIPVIQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GK +A TEDMDALTFG+ I+LR
Sbjct: 167 CAELVKKGKAWAVGTEDMDALTFGSTIMLRH 197
>gi|328852744|gb|EGG01887.1| hypothetical protein MELLADRAFT_110505 [Melampsora larici-populina
98AG31]
Length = 385
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++DK RR V+V+ H +EC+ LL+LMGIP+ V+AP EAEAQ
Sbjct: 119 GTTEDLDKLTRRTVKVTREHNEECRRLLTLMGIPW---------------VIAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G VY +EDMD LTFGT +LLR
Sbjct: 164 CAELCKGGLVYGAGSEDMDTLTFGTPLLLRH 194
>gi|302796239|ref|XP_002979882.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
gi|302813529|ref|XP_002988450.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300143852|gb|EFJ10540.1| hypothetical protein SELMODRAFT_128023 [Selaginella moellendorffii]
gi|300152642|gb|EFJ19284.1| hypothetical protein SELMODRAFT_111465 [Selaginella moellendorffii]
Length = 377
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 16/112 (14%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
LT + G+ +I+K+++R V+V+ H ++C++LL LMGIP IE A
Sbjct: 109 LTEAIEKGEVADIEKYSKRTVKVTKQHNEDCQKLLRLMGIPVIE---------------A 153
Query: 63 PCEAEAQCAAMVKAGK-VYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
PCEAEA+CAA+ KA K VYA A+EDMD+LTFG+ LR + A+ + E
Sbjct: 154 PCEAEAECAALCKADKVVYAVASEDMDSLTFGSPRFLRHLMEPASRKIPVME 205
>gi|384498961|gb|EIE89452.1| hypothetical protein RO3G_14163 [Rhizopus delemar RA 99-880]
Length = 118
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 16/99 (16%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
+E+ K+++R ++++ H +ECK LL+ MGIPY+E AP EAEAQCA
Sbjct: 13 GKEVTKYSKRTIKITREHTEECKRLLTAMGIPYLE---------------APSEAEAQCA 57
Query: 72 AMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMH 110
+ K GKV+A A+EDMD L F T ILLR L+++ +H
Sbjct: 58 ELAKEGKVFAAASEDMDTLVFKTPILLR-HLTFSGSRIH 95
>gi|317374863|sp|B8AW67.1|FEN11_ORYSI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|218197185|gb|EEC79612.1| hypothetical protein OsI_20807 [Oryza sativa Indica Group]
Length = 380
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
ELT + GD I+KF++R V+V+ H +ECK LL LMG+P +E
Sbjct: 111 ELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
APCEAEA+CAA+ VYA A+EDMD+LTFG LR + ++ + E
Sbjct: 156 APCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVME 207
>gi|115465159|ref|NP_001056179.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|62510701|sp|Q9SXQ6.1|FEN11_ORYSJ RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A; AltName:
Full=OsFEN-1a
gi|4587225|dbj|BAA36171.1| FEN-1 [Oryza sativa Japonica Group]
gi|113579730|dbj|BAF18093.1| Os05g0540100 [Oryza sativa Japonica Group]
gi|222632398|gb|EEE64530.1| hypothetical protein OsJ_19381 [Oryza sativa Japonica Group]
Length = 380
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
ELT + GD I+KF++R V+V+ H +ECK LL LMG+P +E
Sbjct: 111 ELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
APCEAEA+CAA+ VYA A+EDMD+LTFG LR + ++ + E
Sbjct: 156 APCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVME 207
>gi|353235791|emb|CCA67798.1| probable DNA repair endonuclease rad2 [Piriformospora indica DSM
11827]
Length = 366
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E++KF+RR VRV+ H +EC++LL LMGIP V+AP EAEAQ
Sbjct: 83 GTTEEVEKFSRRQVRVTKEHNEECRKLLGLMGIPV---------------VVAPSEAEAQ 127
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + G VY +EDMD LTF + ILLR
Sbjct: 128 CAELARGGLVYGAGSEDMDTLTFNSPILLRH 158
>gi|55733906|gb|AAV59413.1| putative flap endonuclease 1 [Oryza sativa Japonica Group]
Length = 380
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
ELT + GD I+KF++R V+V+ H +ECK LL LMG+P +E
Sbjct: 114 ELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVE--------------- 158
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
APCEAEA+CAA+ VYA A+EDMD+LTFG LR + ++ + E
Sbjct: 159 APCEAEAECAALCINDMVYAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVME 210
>gi|330797354|ref|XP_003286726.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
gi|325083324|gb|EGC36780.1| hypothetical protein DICPUDRAFT_31355 [Dictyostelium purpureum]
Length = 383
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++++ KF +R + VS +EC +LL+LMG+P ++ APCEAEAQ
Sbjct: 119 GTSEDVQKFAKRTISVSRKQNEECIKLLTLMGVPVVK---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK+GK +AT +EDMD+LT G+ +LLR+
Sbjct: 164 CAEIVKSGKAWATGSEDMDSLTLGSTVLLRR 194
>gi|238481386|ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|332006194|gb|AED93577.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 383
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + G+ ++I+K+++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLTGAIEAGNKEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
A EAEAQCAA+ K+GKVY A+EDMD+LTFG LR + ++ + E
Sbjct: 156 ATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRHLMDPSSRKIPVME 207
>gi|74612809|sp|Q76F73.1|FEN1_COPCI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46092541|dbj|BAD14303.1| flap endonuclease-1 [Coprinopsis cinerea]
Length = 458
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++D+F+RR V+V+ H +EC++LL LM +P V+AP EAEAQ
Sbjct: 119 GTAEDVDRFSRRTVKVTKQHNEECQKLLRLMSVPC---------------VIAPSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA +EDMD LTF IL R
Sbjct: 164 CAELARGGKVYAAGSEDMDTLTFNAPILFRH 194
>gi|297812863|ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
gi|297320152|gb|EFH50574.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
lyrata]
Length = 448
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + G+ ++I+K+++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLTGAIEAGNKEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A EAEAQCAA+ K+GKVY A+EDMD+LTFG LR
Sbjct: 156 ATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 194
>gi|389593155|ref|XP_003721831.1| putative flap endonuclease-1 (FEN-1) [Leishmania major strain
Friedlin]
gi|122048622|sp|Q4FYU7.1|FEN1_LEIMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|321438333|emb|CBZ12085.1| putative flap endonuclease-1 (FEN-1) [Leishmania major strain
Friedlin]
Length = 395
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R VRVS + E K+LL LMGIP I+ AP EAEAQ
Sbjct: 122 GDDEMMEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GK +A TEDMDALTFG+ ++LR
Sbjct: 167 CAELVKKGKAWAVGTEDMDALTFGSTVMLRH 197
>gi|146090657|ref|XP_001466297.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|398017392|ref|XP_003861883.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
gi|317374906|sp|A4I2L4.1|FEN1_LEIIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134070659|emb|CAM69008.1| putative flap endonuclease-1 (FEN-1) [Leishmania infantum JPCM5]
gi|322500111|emb|CBZ35186.1| flap endonuclease-1 (FEN-1), putative [Leishmania donovani]
Length = 395
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R VRVS + E K+LL LMGIP I+ AP EAEAQ
Sbjct: 122 GDDEMMEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GK +A TEDMDALTFG+ ++LR
Sbjct: 167 CAELVKKGKAWAVGTEDMDALTFGSTVMLRH 197
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
E + L TGD ++I+KF++R V+V+ HV +CK+LL LM +PY V+
Sbjct: 111 EYEMALETGDKEQIEKFDKRKVKVTKKHVDDCKKLLDLMKVPY---------------VV 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
AP EAEA A + G V A ATEDMDALTFG ILLR
Sbjct: 156 APSEAEAYAAYLCIKGVVDAVATEDMDALTFGAPILLR 193
>gi|19115884|ref|NP_594972.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe 972h-]
gi|730469|sp|P39750.1|FEN1_SCHPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNA
repair protein rad2; AltName: Full=Flap
structure-specific endonuclease 1
gi|2408077|emb|CAB16282.1| FEN-1 endonuclease Rad2 [Schizosaccharomyces pombe]
gi|4456854|emb|CAB36991.1| RAD2 protein [Schizosaccharomyces pombe]
Length = 380
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+ +D+F +R V+V+ H E K LL LMGIP++ APCEAEAQ
Sbjct: 119 GTAEMVDRFAKRTVKVTRQHNDEAKRLLELMGIPFVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ ++GKVYA A+EDMD L F +LLR
Sbjct: 164 CAALARSGKVYAAASEDMDTLCFQAPVLLRH 194
>gi|428169402|gb|EKX38336.1| flap endonuclease 1 [Guillardia theta CCMP2712]
Length = 435
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E++KF +R RV+ H +ECK LL L+G+P ++ AP EAEAQ
Sbjct: 150 GNVEEMNKFAKRTTRVTKQHAEECKRLLRLLGVPTVD---------------APSEAEAQ 194
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ K G VYA+ATEDMDAL G+ IL+R+
Sbjct: 195 CAALAKNGLVYASATEDMDALCCGSPILVRR 225
>gi|42570539|ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
gi|332006193|gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana]
Length = 453
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + G+ ++I+K+++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLTGAIEAGNKEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
A EAEAQCAA+ K+GKVY A+EDMD+LTFG LR + ++ + E
Sbjct: 156 ATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRHLMDPSSRKIPVME 207
>gi|154339662|ref|XP_001565788.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|317374905|sp|A4HFE4.1|FEN1_LEIBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134063106|emb|CAM45304.1| putative flap endonuclease-1 (FEN-1) [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 395
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R VRVS ++E K+LL LMG+P I+ AP EAEAQ
Sbjct: 122 GDDEMMEKMSKRTVRVSREQIEESKKLLQLMGVPVIQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GK +A TEDMDALTFG+ ++LR
Sbjct: 167 CAELVKKGKAWAVGTEDMDALTFGSTVMLRH 197
>gi|50556476|ref|XP_505646.1| YALI0F20042p [Yarrowia lipolytica]
gi|74632421|sp|Q6C116.1|FEN1_YARLI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49651516|emb|CAG78455.1| YALI0F20042p [Yarrowia lipolytica CLIB122]
Length = 389
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 16/93 (17%)
Query: 9 TGDAQE-IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAE 67
T +AQE + +F +R VRV+ E K+LL+LMGIP +E APCEAE
Sbjct: 128 TKEAQEDVTRFEKRTVRVTPEQNDEAKKLLTLMGIPIVE---------------APCEAE 172
Query: 68 AQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AQCA + +AGKVYA A+EDMD L FG+ +LLR
Sbjct: 173 AQCAKLAEAGKVYAAASEDMDTLCFGSPVLLRH 205
>gi|409079272|gb|EKM79634.1| hypothetical protein AGABI1DRAFT_114134 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +E+DK +RR V+V+ H EC LL LMGIP V+AP EAEA
Sbjct: 118 TGTVEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPV---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILYRH 194
>gi|426196176|gb|EKV46105.1| hypothetical protein AGABI2DRAFT_193982 [Agaricus bisporus var.
bisporus H97]
Length = 429
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +E+DK +RR V+V+ H EC LL LMGIP V+AP EAEA
Sbjct: 118 TGTVEEVDKLSRRTVKVTKEHNAECIRLLKLMGIPV---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA +EDMD LTF IL R
Sbjct: 163 QCAELARGGKVYAAGSEDMDTLTFNAPILYRH 194
>gi|168066677|ref|XP_001785260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374868|sp|A9U328.1|FEN12_PHYPA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|162663130|gb|EDQ49912.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Query: 8 LTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAE 67
L G+ +++K+++R V+V+ H ++C++LL LMG+P +E AP EAE
Sbjct: 117 LEGNEADMEKYSKRTVKVTKQHNEDCRKLLRLMGVPVVE---------------APSEAE 161
Query: 68 AQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A+CA++ K GKVYA A+EDMD+LTFG+ LR
Sbjct: 162 AECASLCKTGKVYAVASEDMDSLTFGSTRFLRH 194
>gi|3047083|gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
Length = 362
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + G+ ++I+K+++R V+V+ H +CK LL LMG+P +E
Sbjct: 144 DLTGAIEAGNKEDIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVE--------------- 188
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A EAEAQCAA+ K+GKVY A+EDMD+LTFG LR
Sbjct: 189 ATSEAEAQCAALCKSGKVYGVASEDMDSLTFGAPKFLRH 227
>gi|255713324|ref|XP_002552944.1| KLTH0D05126p [Lachancea thermotolerans]
gi|317374904|sp|C5DGG4.1|FEN1_LACTC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238934324|emb|CAR22506.1| KLTH0D05126p [Lachancea thermotolerans CBS 6340]
Length = 385
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+V+ H +E K+LL LMG+PY+E APCEAEAQCA + KA
Sbjct: 123 KHERRLVKVTPEHNEEAKKLLRLMGLPYVE---------------APCEAEAQCAELAKA 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|388498254|gb|AFK37193.1| unknown [Lotus japonicus]
Length = 366
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L+ L + ++I+KF++R V+V+ H ++ K+LL LMG+P +E
Sbjct: 95 DLSEALKADNKEDIEKFSKRTVKVTKQHNEDYKKLLRLMGVPVVE--------------- 139
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ KAG VYA A+EDMD+LTFG LR
Sbjct: 140 APSEAEAQCAALCKAGMVYAVASEDMDSLTFGAPKFLRH 178
>gi|71023659|ref|XP_762059.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
gi|74699231|sp|Q4P1V1.1|FEN1_USTMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46101624|gb|EAK86857.1| hypothetical protein UM05912.1 [Ustilago maydis 521]
Length = 374
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
DA+++D+ RR VR + H +E + LL LMGIP V+AP EAEAQC
Sbjct: 120 DAEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPC---------------VIAPSEAEAQC 164
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +AGKVYA +EDMD LTFGT ILL+
Sbjct: 165 AELARAGKVYAAGSEDMDTLTFGTPILLKH 194
>gi|385302733|gb|EIF46850.1| structure-specific endonuclease rad27 [Dekkera bruxellensis
AWRI1499]
Length = 305
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
QE+ KF RR VRV+ +E K LL LMGIPY+E APCEAE+QCA
Sbjct: 48 QELQKFQRRTVRVTREQNEEAKHLLRLMGIPYVE---------------APCEAESQCAE 92
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+ KAG VY A+EDMD L + +LLR
Sbjct: 93 LAKAGNVYGAASEDMDTLCYQPTVLLR 119
>gi|254567327|ref|XP_002490774.1| 5' to 3' exonuclease, 5' flap endonuclease [Komagataella pastoris
GS115]
gi|317376166|sp|C4QZ20.1|FEN1_PICPG RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238030570|emb|CAY68494.1| 5' to 3' exonuclease, 5' flap endonuclease [Komagataella pastoris
GS115]
gi|328351158|emb|CCA37558.1| flap endonuclease-1 [Komagataella pastoris CBS 7435]
Length = 373
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +I KF RR VRV+ + K+LL LMGIPY++ APCEAEA
Sbjct: 118 TGTLADIAKFERRTVRVTREQNDQAKKLLELMGIPYVD---------------APCEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + K GKVYA A+EDMD L + T LLR
Sbjct: 163 QCAELAKGGKVYAAASEDMDTLCYETPYLLRH 194
>gi|66811596|ref|XP_639977.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
gi|74854014|sp|Q54NU0.1|FEN1_DICDI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|60466913|gb|EAL64957.1| hypothetical protein DDB_G0284987 [Dictyostelium discoideum AX4]
Length = 384
Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ KF +R++ V+ ++C +LL+LMG+P ++ APCEAEAQ
Sbjct: 119 GTNEEVQKFAKRVITVTRKQNEDCIKLLTLMGVPIVK---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK GK +AT +EDMD+LT G+ +LLR+
Sbjct: 164 CAEIVKKGKAWATGSEDMDSLTLGSTVLLRR 194
>gi|443894995|dbj|GAC72341.1| hypothetical protein PANT_7d00055 [Pseudozyma antarctica T-34]
Length = 373
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +++D+ RR VR + H +E ++LL LMGIP V+AP EAEAQC
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRQLLKLMGIPC---------------VIAPSEAEAQC 164
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +AGKVYA +EDMD LTFGT ILL+
Sbjct: 165 AELARAGKVYAAGSEDMDTLTFGTPILLKH 194
>gi|328874795|gb|EGG23160.1| XPG [Dictyostelium fasciculatum]
Length = 308
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++ KF++R + +EC +LL+LMGIP V APCEAEA
Sbjct: 133 TGTTEDVAKFSKRTTSATRKQNEECIKLLTLMGIPV---------------VRAPCEAEA 177
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
QCA +VK GK +A+ +EDMD+L FGT ILLR + WE
Sbjct: 178 QCAELVKGGKAWASGSEDMDSLAFGTKILLRNLTASDQKKNPLWE 222
>gi|170119612|ref|XP_001890929.1| predicted protein [Laccaria bicolor S238N-H82]
gi|317374866|sp|B0E412.1|FEN12_LACBS RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|164633979|gb|EDQ98419.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 469
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 20/97 (20%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +++D+F+RR V+V+ H +EC+ LL LMGIP V+AP EAEA
Sbjct: 116 TGTVEDVDRFSRRTVKVTREHNQECQRLLRLMGIPV---------------VIAPSEAEA 160
Query: 69 QCAAMVKAGKV-----YATATEDMDALTFGTNILLRQ 100
QCA + + GKV YA +EDMD LTF IL R
Sbjct: 161 QCAELARGGKVYIALYYAAGSEDMDTLTFNAPILFRH 197
>gi|384245741|gb|EIE19234.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 60/104 (57%), Gaps = 15/104 (14%)
Query: 3 LTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLA 62
LT TG +I+K+++R VRV+ H +EC+ LL LMG+P +E A
Sbjct: 112 LTEAKETGADADIEKYSKRTVRVTPQHNEECRRLLRLMGVPVVE---------------A 156
Query: 63 PCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
P EAEAQCA M K G VY A+EDMD+LTF T L+R + T
Sbjct: 157 PSEAEAQCAQMCKEGLVYGIASEDMDSLTFATPKLIRNLMKPQT 200
>gi|357122637|ref|XP_003563021.1| PREDICTED: flap endonuclease 1-B-like [Brachypodium distachyon]
Length = 413
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD I+KF++R V+++ H +CK+LL LMG+P +E
Sbjct: 111 DLNRAIEVGDEDSIEKFSKRTVKITKKHNDDCKKLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCA++ K K YA A+EDMD+LTFG+ LR
Sbjct: 156 APGEAEAQCASLCKNHKAYAVASEDMDSLTFGSLRFLRH 194
>gi|343427426|emb|CBQ70953.1| probable DNA repair endonuclease rad2 [Sporisorium reilianum SRZ2]
Length = 374
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +++D+ RR VR + H +E + LL LMGIP V+AP EAEAQC
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPC---------------VIAPSEAEAQC 164
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +AGKVYA +EDMD LTFGT ILL+
Sbjct: 165 AELARAGKVYAAGSEDMDTLTFGTPILLKH 194
>gi|388854784|emb|CCF51677.1| probable DNA repair endonuclease rad2 [Ustilago hordei]
Length = 374
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +++D+ RR VR + H +E + LL LMGIP V+AP EAEAQC
Sbjct: 120 DVEKMDQLARRQVRPTRQHNEEVRHLLKLMGIPC---------------VIAPSEAEAQC 164
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +AGKVYA +EDMD LTFGT ILL+
Sbjct: 165 AELARAGKVYAAGSEDMDTLTFGTPILLKH 194
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD I+KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLNRAMEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + +VYA A+EDMD LTFG LR
Sbjct: 156 APGEAEAQCAALCENHQVYAVASEDMDTLTFGARRFLRH 194
>gi|254585117|ref|XP_002498126.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
gi|317376173|sp|C5DZA9.1|FEN1_ZYGRC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238941020|emb|CAR29193.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
Length = 379
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+VS H E K LL LMGIPYI +APCEAEAQC
Sbjct: 117 DQAEKLKQERRLVKVSPEHNDEAKYLLKLMGIPYI---------------VAPCEAEAQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T LLR
Sbjct: 162 AQLAKDGKVYAAASEDMDTLCYKTPYLLRH 191
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD I+KF++R V+V+ H ++CK LLSLMG+P ++
Sbjct: 111 DLNRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQ--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + KV+A A+EDMD+LTFG LR
Sbjct: 156 APGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRH 194
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD I+KF++R V+V+ H ++CK LLSLMG+P ++
Sbjct: 111 DLNRAIEVGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQ--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + KV+A A+EDMD+LTFG LR
Sbjct: 156 APGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRH 194
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD I+KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 111 DLNRAMEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + +VYA A+EDMD LTFG LR
Sbjct: 156 APGEAEAQCAALCENHQVYAVASEDMDTLTFGARRFLRH 194
>gi|410074109|ref|XP_003954637.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
gi|372461219|emb|CCF55502.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
Length = 379
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+VS H E K+LL LMGIPY+ APCEAEAQC
Sbjct: 117 DIAEKIKHERRLVKVSKEHNDEAKKLLELMGIPYVN---------------APCEAEAQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T L+R
Sbjct: 162 AELAKVGKVYAAASEDMDTLCYRTPYLVRH 191
>gi|156845450|ref|XP_001645616.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
gi|317376167|sp|A7TJ59.1|FEN1_VANPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156116281|gb|EDO17758.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
Length = 377
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+VS H E K+LL LMGIPYI APCEAE+QC
Sbjct: 117 DQAEKMKQERRLVKVSKEHNDEAKQLLELMGIPYI---------------TAPCEAESQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T LLR
Sbjct: 162 AELAKCGKVYAAASEDMDTLCYRTPYLLRH 191
>gi|145514642|ref|XP_001443226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124447858|sp|A0CYG2.1|FEN12_PARTE RecName: Full=Flap endonuclease 1-2; Short=FEN-1-2; AltName:
Full=Flap structure-specific endonuclease 1-2
gi|124410604|emb|CAK75829.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 15/95 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
L L GD Q+ N+R +SS+ ++ ++L LMG P I +APC
Sbjct: 117 LALEQGDMQQALLQNQRTTTISSIMKEDAIKMLQLMGCPVI---------------IAPC 161
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAEAQCA + +AGK+YATATEDMDALTF T +LLR
Sbjct: 162 EAEAQCAELCRAGKIYATATEDMDALTFRTPVLLR 196
>gi|440795563|gb|ELR16683.1| hypothetical protein ACA1_089310 [Acanthamoeba castellanii str.
Neff]
Length = 343
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 13/81 (16%)
Query: 20 RRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKV 79
RR+VRV+ H++ECK+LL LMG+P ++ A EAEAQCA + +AGKV
Sbjct: 109 RRVVRVTPTHIEECKKLLGLMGMPVVQAP-------------AGGEAEAQCAELCRAGKV 155
Query: 80 YATATEDMDALTFGTNILLRQ 100
+A +EDMDALTFG +LLR
Sbjct: 156 FAVGSEDMDALTFGAPVLLRH 176
>gi|452822684|gb|EME29701.1| flap endonuclease-1 [Galdieria sulphuraria]
Length = 377
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + +KFNRR+ +VS +++ K LL LMGIP +E AP EAEAQ
Sbjct: 118 GDVEAYEKFNRRVNKVSPEVIEQSKRLLRLMGIPILE---------------APEEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA++ K VYATA+EDMD+LTFG++ ++RQ
Sbjct: 163 CASLCKENLVYATASEDMDSLTFGSSKVIRQ 193
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD ++KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 138 DLNRAIEIGDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVE--------------- 182
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + +VYA A+EDMD+LTFG LR
Sbjct: 183 APGEAEAQCAALCENHQVYAVASEDMDSLTFGARRFLRH 221
>gi|150866777|ref|XP_001386488.2| hypothetical protein PICST_33791 [Scheffersomyces stipitis CBS
6054]
gi|317376214|sp|A3M056.2|FEN1_PICST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|149388033|gb|ABN68459.2| Exodeoxyribonuclease [Scheffersomyces stipitis CBS 6054]
Length = 381
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG E+ KF +RLVRVS E K+LL LMGIPY+ APCEAEA
Sbjct: 118 TGTVAEVMKFEKRLVRVSREQNDEAKKLLELMGIPYVN---------------APCEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKV+A A+EDMD L + LLR
Sbjct: 163 QCAELARTGKVFAAASEDMDTLCYEPPYLLRH 194
>gi|340052549|emb|CCC46830.1| putative flap endonuclease-1 (FEN-1), fragment [Trypanosoma vivax
Y486]
Length = 393
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA+ ++K +R VR++ ++E K+LL LMGIP ++ AP EAEAQ
Sbjct: 122 GDAEMMEKMGKRTVRLTQEQMEEAKKLLQLMGIPVVQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK K +A TEDMDALTFG I+LR
Sbjct: 167 CAELVKKNKAWAVGTEDMDALTFGAPIMLRH 197
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L + GD ++KF++R V+V+ H +CK LL LMG+P +E
Sbjct: 187 DLNRAIEIGDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVE--------------- 231
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCAA+ + +VYA A+EDMD+LTFG LR
Sbjct: 232 APGEAEAQCAALCENHQVYAVASEDMDSLTFGARRFLRH 270
>gi|402218593|gb|EJT98669.1| PIN domain-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 399
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG ++I + R VRV+ H +EC++LL+LMGIP V+AP EAEA
Sbjct: 118 TGTVEDIARLAGRTVRVTREHNEECQKLLALMGIPC---------------VVAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKV+A +EDMD LTF T ILLR
Sbjct: 163 QCAELARGGKVFAAGSEDMDTLTFNTPILLRH 194
>gi|354546051|emb|CCE42780.1| hypothetical protein CPAR2_204230 [Candida parapsilosis]
Length = 383
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G E+ K+ +RLVRV E K+LL LMGIPY+ APCEAEAQ
Sbjct: 119 GSVAEVMKYEKRLVRVGRDQNDEAKKLLELMGIPYVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA A+EDMD L + LLR
Sbjct: 164 CAELARGGKVYAAASEDMDTLCYEPPYLLRH 194
>gi|407034393|gb|EKE37191.1| flap nuclease, putative [Entamoeba nuttalli P19]
Length = 376
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD ++ K +R R++ E K+LL LMGIP IE A CEA
Sbjct: 116 LEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCIE---------------ANCEA 160
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
E CAA+VKAGK YATATEDMDALT G+ ++R+
Sbjct: 161 EGSCAALVKAGKCYATATEDMDALTLGSEHVVRK 194
>gi|440301029|gb|ELP93476.1| Flap endonuclease, putative [Entamoeba invadens IP1]
Length = 374
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD +EI K +R R++ + K+L+ LMGIP IE A CEAE
Sbjct: 118 SGDKEEIKKQMKRTARMTKEQSDDVKKLVELMGIPAIE---------------ANCEAEG 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK+GK +ATATEDMDALT G++I+LR+
Sbjct: 163 TCAELVKSGKCFATATEDMDALTLGSDIVLRK 194
>gi|70942151|ref|XP_741275.1| flap exonuclease [Plasmodium chabaudi chabaudi]
gi|74978262|sp|Q4XXP8.1|FEN1_PLACH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56519555|emb|CAH78313.1| flap exonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 479
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE +PCEAEAQ
Sbjct: 120 GNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIE---------------SPCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYDMAHATATEDADALVFGTKILIR 194
>gi|403216014|emb|CCK70512.1| hypothetical protein KNAG_0E02520 [Kazachstania naganishii CBS
8797]
Length = 380
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+VS H +E K+LL LMG+PY++ AP EAEAQC
Sbjct: 117 DLAEKAKQERRLVKVSKEHNEEAKKLLGLMGVPYVD---------------APGEAEAQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T LLR
Sbjct: 162 AELAKGGKVYAAASEDMDTLCYKTPYLLRH 191
>gi|67470614|ref|XP_651270.1| FEN-1 nuclease [Entamoeba histolytica HM-1:IMSS]
gi|317374901|sp|C4M6G8.1|FEN1_ENTHI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56467989|gb|EAL45884.1| FEN-1 nuclease, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710440|gb|EMD49517.1| Flap endonuclease, putative [Entamoeba histolytica KU27]
Length = 376
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD ++ K +R R++ E K+LL LMGIP IE A CEA
Sbjct: 116 LEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCIE---------------ANCEA 160
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
E CAA+VKAGK YATATEDMDALT G+ ++R+
Sbjct: 161 EGTCAALVKAGKCYATATEDMDALTLGSEHVVRK 194
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 15/97 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CA + K +ATATED DAL FGT IL+R + AT
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIRNLNANAT 201
>gi|167391034|ref|XP_001739610.1| Flap endonuclease 1-A [Entamoeba dispar SAW760]
gi|317374900|sp|B0EN90.1|FEN1_ENTDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|165896655|gb|EDR24004.1| Flap endonuclease 1-A, putative [Entamoeba dispar SAW760]
Length = 376
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD ++ K +R R++ E K+LL LMGIP +E A CEA
Sbjct: 116 LEEGDKEQAKKLMKRTARMTKEQSDEVKKLLQLMGIPCVE---------------ANCEA 160
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
E CAA+VKAGK YATATEDMDALT G+ ++R+
Sbjct: 161 EGTCAALVKAGKCYATATEDMDALTLGSEYVVRK 194
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 15/97 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CA + K +ATATED DAL FGT IL+R + AT
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIRNLNANAT 201
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 15/97 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CA + K +ATATED DAL FGT IL+R + AT
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIRNLNANAT 201
>gi|303388735|ref|XP_003072601.1| flap endonuclease-1 [Encephalitozoon intestinalis ATCC 50506]
gi|303301742|gb|ADM11241.1| flap endonuclease-1 [Encephalitozoon intestinalis ATCC 50506]
Length = 345
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++R +V+ +HV+ECK LL LMGIP+ AP EAEA
Sbjct: 117 GDKKLMEMYDKRKTKVTGMHVEECKRLLGLMGIPF---------------ETAPSEAEAY 161
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K VY ATEDMDALTFG+ ++LR
Sbjct: 162 CAFLCKKKAVYGVATEDMDALTFGSPVVLR 191
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++K ++R VRVS ++E K+LL LMGIP ++ AP EAEAQ
Sbjct: 122 GNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK K +A ATEDMDALTFG ++LR
Sbjct: 167 CAELVKKNKAWAVATEDMDALTFGAPVMLRH 197
>gi|242091235|ref|XP_002441450.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
gi|317374865|sp|C5YUK3.1|FEN11_SORBI RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|241946735|gb|EES19880.1| hypothetical protein SORBIDRAFT_09g026950 [Sorghum bicolor]
Length = 380
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 15/104 (14%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++K ++R V+V++ H +CK LL LMG+P +E AP EAEA+
Sbjct: 119 GDKDAVEKLSKRTVKVTAQHNDDCKRLLRLMGVPVVE---------------APSEAEAE 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
CAA+ K KV+A A+EDMD+LTFG LR + ++ + E
Sbjct: 164 CAALCKNDKVFAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVME 207
>gi|83286314|ref|XP_730108.1| Flap endonuclease-1 [Plasmodium yoelii yoelii 17XNL]
gi|74882336|sp|Q7RME3.1|FEN1_PLAYO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|23489735|gb|EAA21673.1| flap endonuclease-1-related [Plasmodium yoelii yoelii]
Length = 480
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE +PCEAEAQ
Sbjct: 120 GNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIE---------------SPCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYEMAHATATEDADALVFGTKILIR 194
>gi|145514173|ref|XP_001442997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124467070|sp|A0CXT3.1|FEN11_PARTE RecName: Full=Flap endonuclease 1-1; Short=FEN-1-1; AltName:
Full=Flap structure-specific endonuclease 1-1
gi|124410358|emb|CAK75600.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 15/95 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
L L GD Q+ ++R +SSV ++ ++L LMG P I +APC
Sbjct: 117 LALEQGDMQQALLQHQRTTTISSVMKEDAIKMLKLMGCPVI---------------IAPC 161
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAEAQCA + +AGK+YATATEDMDALTF T +LLR
Sbjct: 162 EAEAQCAELCRAGKIYATATEDMDALTFRTPVLLR 196
>gi|168014475|ref|XP_001759777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|317374864|sp|A9S0B8.1|FEN11_PHYPA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A
gi|162688907|gb|EDQ75281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG+ +++K++++ V+V+ H ++C++LL LMG+P +E AP EAEA
Sbjct: 118 TGNEADVEKYSKKTVKVTKQHNEDCRKLLRLMGVPVVE---------------APSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+CA++ KA KV+A A+EDMD+LT+G+ LR
Sbjct: 163 ECASLCKAEKVFAVASEDMDSLTYGSTRFLRH 194
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++K ++R VRVS ++E K+LL LMGIP ++ AP EAEAQ
Sbjct: 122 GNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK K +A ATEDMDALTFG ++LR
Sbjct: 167 CAELVKKNKAWAVATEDMDALTFGAPVMLRH 197
>gi|50310391|ref|XP_455215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605424|sp|Q6CLH4.1|FEN1_KLULA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49644351|emb|CAG97923.1| KLLA0F02992p [Kluyveromyces lactis]
Length = 381
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
EI K RRLV+V H +E ++LLSLMGIPY V+AP EAEAQCA +
Sbjct: 120 EIIKHERRLVKVLPWHNEEAQKLLSLMGIPY---------------VVAPAEAEAQCAEL 164
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
K+GKV+A A+EDMD L + T +LLR
Sbjct: 165 AKSGKVFAAASEDMDTLCYQTPVLLRH 191
>gi|302306477|ref|NP_982895.2| ABL052Cp [Ashbya gossypii ATCC 10895]
gi|317374930|sp|Q75DS8.2|FEN1_ASHGO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|299788534|gb|AAS50719.2| ABL052Cp [Ashbya gossypii ATCC 10895]
gi|374106098|gb|AEY95008.1| FABL052Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
EI K RRLV+V HV E K+LL LMGIPY++ AP EAEAQCA +
Sbjct: 120 EIMKHERRLVKVEQWHVAEAKKLLGLMGIPYVD---------------APGEAEAQCAEL 164
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
K GKV+A A+EDMD L + T LLR
Sbjct: 165 AKKGKVFAAASEDMDTLCYRTPYLLRH 191
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP +E APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVVE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIR 194
>gi|221052642|ref|XP_002261044.1| flap exonuclease [Plasmodium knowlesi strain H]
gi|317376188|sp|B3L014.1|FEN1_PLAKH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194247048|emb|CAQ38232.1| flap exonuclease, putative [Plasmodium knowlesi strain H]
Length = 595
Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP +E APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVVE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIR 194
>gi|19173066|ref|NP_597617.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
gi|74621278|sp|Q8SS91.1|FEN1_ENCCU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19168733|emb|CAD26252.1| STRUCTURE-SPECIFIC ENDONUCLEASE OF THE XPG/RAD2 FAMILY
[Encephalitozoon cuniculi GB-M1]
Length = 345
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++R +V+ VHV ECK LL LMGIP+ AP EAEA
Sbjct: 117 GDKELMEMYDKRKTKVTGVHVDECKRLLGLMGIPF---------------ETAPSEAEAY 161
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K VY ATEDMDALTFG+ ++LR
Sbjct: 162 CALLCKKKAVYGVATEDMDALTFGSPVVLRN 192
>gi|449329677|gb|AGE95947.1| structure-specific endonuclease of the XPG/RAD2 family
[Encephalitozoon cuniculi]
Length = 345
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++R +V+ VHV ECK LL LMGIP+ AP EAEA
Sbjct: 117 GDKELMEMYDKRKTKVTGVHVDECKRLLGLMGIPF---------------ETAPSEAEAY 161
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K VY ATEDMDALTFG+ ++LR
Sbjct: 162 CALLCKKKAVYGVATEDMDALTFGSPVVLRN 192
>gi|396081098|gb|AFN82717.1| flap endonuclease-1 [Encephalitozoon romaleae SJ-2008]
Length = 345
Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++R +V+ +HV+ECK LL LMGIP+ AP EAEA
Sbjct: 117 GDKRLMEMYDKRKTKVTGIHVEECKRLLGLMGIPF---------------ETAPSEAEAY 161
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K VY ATEDMD+LTFG+ ++LR
Sbjct: 162 CALLCKKRAVYGVATEDMDSLTFGSPVVLR 191
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP +E APCEAE+Q
Sbjct: 120 GNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPVVE---------------APCEAESQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYNLAHATATEDADALVFGTKILIR 194
>gi|401413646|ref|XP_003886270.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
gi|325120690|emb|CBZ56245.1| putative flap endonuclease-1 [Neospora caninum Liverpool]
Length = 545
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A+E+ K R VRVS H + K LL LMG+P +E APCEAEAQ
Sbjct: 120 GNAEELRKQIVRSVRVSQQHNDDIKRLLRLMGLPVVE---------------APCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K KV+ATATED DALTFG L+R
Sbjct: 165 CAELTKHKKVWATATEDADALTFGATRLIR 194
>gi|367008554|ref|XP_003678778.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
gi|359746435|emb|CCE89567.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
Length = 380
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLVRVS H E K+LL LMG+PY+ AP EAEAQC
Sbjct: 117 DQAEKMKQERRLVRVSKEHNDEAKQLLELMGVPYL---------------TAPTEAEAQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T LLR
Sbjct: 162 AELAKKGKVYAAASEDMDTLCYRTPYLLRH 191
>gi|367003685|ref|XP_003686576.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
gi|357524877|emb|CCE64142.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
Length = 380
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
+I K +RLV+VS H E K LL LMGIPY+ APCEAE+QCA +
Sbjct: 120 DILKQEKRLVKVSKEHNDEAKHLLELMGIPYVN---------------APCEAESQCAEL 164
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
K GKVYA A+EDMD L + T LLR
Sbjct: 165 AKKGKVYAAASEDMDTLCYRTPFLLRH 191
>gi|71652611|ref|XP_814958.1| flap endonuclease-1 (FEN-1) [Trypanosoma cruzi strain CL Brener]
gi|122023721|sp|Q4DKQ5.1|FEN1_TRYCC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|70879977|gb|EAN93107.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma cruzi]
Length = 393
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + ++K ++R VRVS ++E K+LL LMGIP ++ AP EAEAQ
Sbjct: 122 GNDELMEKMSKRTVRVSREQLEEAKKLLQLMGIPVVQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK K +A ATEDMDALTFG ++LR
Sbjct: 167 CAELVKKKKAWAVATEDMDALTFGAPVMLRH 197
>gi|149390675|gb|ABR25355.1| endonuclease putative [Oryza sativa Indica Group]
Length = 262
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G I+KF++R V+V+ H +ECK LL LMG+P +E APCEAEA+
Sbjct: 1 GVKDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVE---------------APCEAEAE 45
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ VYA A+EDMD+LTFG LR
Sbjct: 46 CAALCINDMVYAVASEDMDSLTFGAPRFLRH 76
>gi|449016220|dbj|BAM79622.1| probable flap structure-specific endonuclease 1 [Cyanidioschyzon
merolae strain 10D]
Length = 380
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + K+ RR+ +VS+ + K LL LMGIP +E AP EAEAQ
Sbjct: 119 GDLELYAKYARRVNKVSAETIDNVKRLLRLMGIPVVE---------------APSEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + +AG YATA+EDMDALTFGT +L+R
Sbjct: 164 CAVLTRAGLAYATASEDMDALTFGTPLLIRN 194
>gi|72386509|ref|XP_843679.1| flap endonuclease-1 (FEN-1) [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74830896|sp|Q57WW6.1|FEN1_TRYB2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376199|sp|C9ZKW4.1|FEN1_TRYB9 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|62175773|gb|AAX69901.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei]
gi|70800211|gb|AAZ10120.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261326734|emb|CBH09707.1| flap endonuclease-1 (FEN-1), putative [Trypanosoma brucei gambiense
DAL972]
Length = 393
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R+VRV ++E K LL LMGIP ++ AP EAEAQ
Sbjct: 122 GDDEAMEKMSKRMVRVGRDQMEEVKTLLRLMGIPVVQ---------------APSEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +VK K +A TEDMDAL FG+ ++LR
Sbjct: 167 CAELVKKNKAWAVGTEDMDALAFGSRVMLRH 197
>gi|317376169|sp|B3LQY3.1|FEN1_YEAS1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190409721|gb|EDV12986.1| structure-specific endonuclease RAD27 [Saccharomyces cerevisiae
RM11-1a]
Length = 382
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|349579452|dbj|GAA24614.1| K7_Rad27p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 382
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|68062082|ref|XP_673044.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490604|emb|CAI01886.1| hypothetical protein PB300433.00.0 [Plasmodium berghei]
Length = 375
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K + R VRV+ +E K+LL+LMGIP IE +PCEAEAQ
Sbjct: 120 GNLEEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIE---------------SPCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K +ATATED DAL FGT IL+R
Sbjct: 165 CAFLTKYEMAHATATEDADALVFGTKILIR 194
>gi|6322736|ref|NP_012809.1| Rad27p [Saccharomyces cerevisiae S288c]
gi|140964|sp|P26793.1|FEN1_YEAST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1; AltName: Full=RAD2
homolog nuclease 1; Short=RTH1 nuclease; AltName:
Full=Structure-specific endonuclease RAD27
gi|317376170|sp|C7GVJ8.1|FEN1_YEAS2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376171|sp|A6ZZK4.1|FEN1_YEAS7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376172|sp|C8ZC62.1|FEN1_YEAS8 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|248392|gb|AAB21998.1| RAD2 homolog [Saccharomyces cerevisiae]
gi|486190|emb|CAA81953.1| RAD27 [Saccharomyces cerevisiae]
gi|151941690|gb|EDN60052.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|256269907|gb|EEU05165.1| Rad27p [Saccharomyces cerevisiae JAY291]
gi|259147728|emb|CAY80978.1| Rad27p [Saccharomyces cerevisiae EC1118]
gi|285813148|tpg|DAA09045.1| TPA: Rad27p [Saccharomyces cerevisiae S288c]
gi|323347750|gb|EGA82014.1| Rad27p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764563|gb|EHN06085.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298324|gb|EIW09422.1| Rad27p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 382
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|300707184|ref|XP_002995811.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
gi|239605030|gb|EEQ82140.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
Length = 265
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+L L + D EI+K +R ++VS HV +CK LL LMGIPY+
Sbjct: 109 QLKLAMEAEDKAEIEKQTKRKIKVSEEHVNDCKRLLKLMGIPYL---------------T 153
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEA CA + K V A ATEDMDAL FG +LLR S A H E
Sbjct: 154 APSEAEAFCAYLCKVKCVDAVATEDMDALPFGAPVLLRGFSSAAVKKTHVTE 205
>gi|323354056|gb|EGA85902.1| Rad27p [Saccharomyces cerevisiae VL3]
Length = 382
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|401624921|gb|EJS42958.1| rad27p [Saccharomyces arboricola H-6]
Length = 382
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|323332740|gb|EGA74145.1| Rad27p [Saccharomyces cerevisiae AWRI796]
Length = 370
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 111 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 155
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 156 GKVYAAASEDMDTLCYRTPFLLRH 179
>gi|403341860|gb|EJY70247.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 404
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + R +RV+ +++ K+LL LMG P +E AP EAEAQ
Sbjct: 123 GDLEGAKRMAGRSIRVTPEMMEDAKKLLRLMGTPVVE---------------APGEAEAQ 167
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA +VK G YATA+EDMD+LTFGTN+LLR
Sbjct: 168 CAVIVKHGLAYATASEDMDSLTFGTNVLLR 197
>gi|207343574|gb|EDZ71001.1| YKL113Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 261
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMGIPYI +AP EAEAQCA + K
Sbjct: 2 KQERRLVKVSKEHNEEAQKLLGLMGIPYI---------------IAPTEAEAQCAELAKK 46
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 47 GKVYAAASEDMDTLCYRTPFLLRH 70
>gi|365759754|gb|EHN01528.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMG+PYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGVPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|300120156|emb|CBK19710.2| unnamed protein product [Blastocystis hominis]
Length = 370
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
+ +EI+K ++R V + H+ +CKELL LMG+P I+ A EAE+QC
Sbjct: 123 NQEEIEKLSKRTVHMEGGHINDCKELLRLMGVPVID---------------AASEAESQC 167
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K KV+A A+EDMD+LTFGT +L+R
Sbjct: 168 AELAKKKKVWAMASEDMDSLTFGTPVLIRH 197
>gi|50292567|ref|XP_448716.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608857|sp|Q6FM28.1|FEN1_CANGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49528028|emb|CAG61679.1| unnamed protein product [Candida glabrata]
Length = 381
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H E K+LL LMGIPY+ AP EAEAQCA + K
Sbjct: 123 KHERRLVKVSKEHNDEAKKLLELMGIPYVN---------------APGEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPYLLRH 191
>gi|365989632|ref|XP_003671646.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
gi|343770419|emb|CCD26403.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
Length = 384
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 52/95 (54%), Gaps = 15/95 (15%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
F D E K RRLV+VS H E K+LL LMGIPY+ AP E
Sbjct: 112 FAEATDQAEKIKQERRLVKVSKEHNDEAKKLLELMGIPYVN---------------APGE 156
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AEAQCA + K GKVYA A+EDMD L + T LLR
Sbjct: 157 AEAQCAELAKKGKVYAAASEDMDTLCYRTPYLLRH 191
>gi|413946273|gb|AFW78922.1| flap endonuclease 1a [Zea mays]
Length = 523
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + GD I+K ++R V+V+ H ++CK LL LMG+P +E
Sbjct: 255 DLTEAVEVGDKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVE--------------- 299
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEA+CAA+ KV+A A+EDMD+LTFG LR
Sbjct: 300 APSEAEAECAALCINDKVFAVASEDMDSLTFGAPRFLRH 338
>gi|401841744|gb|EJT44085.1| RAD27-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 380
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K RRLV+VS H +E ++LL LMG+PYI +AP EAEAQCA + K
Sbjct: 123 KQERRLVKVSKEHNEEAQKLLGLMGVPYI---------------IAPTEAEAQCAELAKK 167
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + T LLR
Sbjct: 168 GKVYAAASEDMDTLCYRTPFLLRH 191
>gi|317374910|sp|B4FHY0.1|FEN1_MAIZE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194695278|gb|ACF81723.1| unknown [Zea mays]
Length = 379
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + GD I+K ++R V+V+ H ++CK LL LMG+P +E
Sbjct: 111 DLTEAVEVGDKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEA+CAA+ KV+A A+EDMD+LTFG LR + ++ + E
Sbjct: 156 APSEAEAECAALCINDKVFAVASEDMDSLTFGAPRFLRHLMDPSSKKIPVME 207
>gi|145349446|ref|XP_001419144.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|317374919|sp|A4S1G4.1|FEN1_OSTLU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|144579375|gb|ABO97437.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E++K ++R VRVS H +E +L SL+G+P E APCEAEA
Sbjct: 119 GNQEEVEKLSKRTVRVSKQHSQEVMKLASLLGVPVFE---------------APCEAEAS 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAM KAG V+A ATEDMD LTF L R
Sbjct: 164 CAAMCKAGLVWAVATEDMDTLTFAAPRLARN 194
>gi|68477053|ref|XP_717504.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
gi|68477234|ref|XP_717410.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|74586103|sp|Q5A6K8.1|FEN1_CANAL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|46439119|gb|EAK98441.1| hypothetical protein CaO19.547 [Candida albicans SC5314]
gi|46439217|gb|EAK98538.1| hypothetical protein CaO19.8182 [Candida albicans SC5314]
Length = 372
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ KF +RLVRV+ +E K+LL LMGIP ++ APCEAEAQ
Sbjct: 119 GTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPCVD---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA A+EDMD L + LLR
Sbjct: 164 CAELARGGKVYAAASEDMDTLCYEPPFLLRH 194
>gi|317374880|sp|C4YLS2.1|FEN1_CANAW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238879915|gb|EEQ43553.1| structure-specific endonuclease RAD27 [Candida albicans WO-1]
Length = 372
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ KF +RLVRV+ +E K+LL LMGIP ++ APCEAEAQ
Sbjct: 119 GTVEEVLKFEKRLVRVTREQNEEAKKLLQLMGIPCVD---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA A+EDMD L + LLR
Sbjct: 164 CAELARGGKVYAAASEDMDTLCYEPPFLLRH 194
>gi|241958594|ref|XP_002422016.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
gi|317374881|sp|B9WLQ5.1|FEN1_CANDC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|223645361|emb|CAX40017.1| structure-specific endonuclease, putative [Candida dubliniensis
CD36]
Length = 372
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ KF +RLVRV+ +E K+LL LMGIP ++ APCEAEAQ
Sbjct: 119 GTVEEVLKFEKRLVRVTREQNEEAKKLLELMGIPCVD---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKVYA A+EDMD L + LLR
Sbjct: 164 CAELARGGKVYAAASEDMDTLCYEPPFLLRH 194
>gi|195629924|gb|ACG36603.1| flap endonuclease 1a [Zea mays]
Length = 379
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
+LT + GD I+K ++R V+V+ H ++CK LL LMG+P +E
Sbjct: 111 DLTEAVEVGDKDAIEKLSKRTVKVTRQHNEDCKRLLRLMGVPVVE--------------- 155
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
AP EAEA+CAA+ KV+A A+EDMD+LTFG LR + ++ + E
Sbjct: 156 APSEAEAECAALCINDKVFAVASEDMDSLTFGAPRXLRHLMDPSSKKIPVME 207
>gi|255076159|ref|XP_002501754.1| flap endonuclease-1 [Micromonas sp. RCC299]
gi|317374911|sp|C1E3X9.1|FEN1_MICSR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|226517018|gb|ACO63012.1| flap endonuclease-1 [Micromonas sp. RCC299]
Length = 384
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +EI+K ++R VRVS VH +E +L +G+P E APCEAEA
Sbjct: 119 GDQEEIEKLSKRTVRVSKVHSEEVMKLARFLGLPVFE---------------APCEAEAT 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+ KAG VYA A+EDMD L F T L R
Sbjct: 164 CAALCKAGLVYAAASEDMDTLCFSTPKLARN 194
>gi|363755676|ref|XP_003648053.1| hypothetical protein Ecym_7411 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892089|gb|AET41236.1| hypothetical protein Ecym_7411 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
EI K RRLV+V H +E K+LL LMGIPY++ AP EAEAQCA +
Sbjct: 166 EILKHERRLVKVEKWHNEEAKKLLGLMGIPYVD---------------APSEAEAQCAEL 210
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
K GKV+A A+EDMD L + T LLR
Sbjct: 211 AKKGKVFAAASEDMDTLCYRTPYLLRH 237
>gi|343471550|emb|CCD16055.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++K ++R+VRVS + E K LL LMGIP ++ AP EAEAQ
Sbjct: 162 GDDEAMEKMSKRMVRVSREQMDEVKTLLQLMGIPVVQ---------------APSEAEAQ 206
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +V+ K +A TEDMDAL FG ++LR
Sbjct: 207 CAELVRKDKAWAVGTEDMDALAFGARVMLRH 237
>gi|68074223|ref|XP_679026.1| flap exonuclease [Plasmodium berghei strain ANKA]
gi|74991237|sp|Q4Z015.1|FEN1_PLABA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|56499663|emb|CAH96377.1| flap exonuclease, putative [Plasmodium berghei]
Length = 478
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+EI K + R VRV+ +E K+LL+LMGIP IE +PCEAEAQCA
Sbjct: 122 EEIKKQSGRTVRVTKKQNEEAKKLLTLMGIPVIE---------------SPCEAEAQCAF 166
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+ K +ATATED DAL FGT IL+R
Sbjct: 167 LTKYEMAHATATEDADALVFGTKILIR 193
>gi|401825763|ref|XP_003886976.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
gi|392998133|gb|AFM97995.1| flap endonuclease-1 [Encephalitozoon hellem ATCC 50504]
Length = 345
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++R +V+ VHV+ECK LL LMGIP+ AP EAEA
Sbjct: 117 GDKRLMEMYDKRKTKVTGVHVEECKRLLGLMGIPF---------------ETAPSEAEAY 161
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + + VY ATEDMD+LTFG+ ++LR
Sbjct: 162 CAFLCRKRIVYGVATEDMDSLTFGSPVVLR 191
>gi|149239008|ref|XP_001525380.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
gi|317374907|sp|A5E121.1|FEN1_LODEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146450873|gb|EDK45129.1| structure-specific endonuclease RAD27 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 384
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
++ K+ +RLVRVS E K+LL LMGIPY+ APCEAEAQCA +
Sbjct: 123 DMTKYQKRLVRVSRDQNDEAKKLLELMGIPYVN---------------APCEAEAQCAEL 167
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
+ GKV+A A+EDMD L + LLR
Sbjct: 168 ARGGKVFAAASEDMDTLCYEPPQLLRH 194
>gi|366994432|ref|XP_003676980.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
gi|342302848|emb|CCC70625.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
Length = 379
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+VS H E K+LL LMGIPY+ AP EAE+QC
Sbjct: 117 DQAEKMKQERRLVKVSKEHNDEAKKLLELMGIPYVN---------------APGEAESQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K GKVYA A+EDMD L + T LLR
Sbjct: 162 AELAKKGKVYAAASEDMDTLCYRTPYLLRH 191
>gi|255721403|ref|XP_002545636.1| structure-specific endonuclease RAD27 [Candida tropicalis MYA-3404]
gi|317374882|sp|C5M2X8.1|FEN1_CANTT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|240136125|gb|EER35678.1| structure-specific endonuclease RAD27 [Candida tropicalis MYA-3404]
Length = 374
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF +RLVRVS +E K+LL LMGIP +E APCEAEAQCA + +
Sbjct: 126 KFEKRLVRVSREQNEEAKKLLELMGIPIVE---------------APCEAEAQCAELARG 170
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
GKVYA A+EDMD L + LLR
Sbjct: 171 GKVYAAASEDMDTLCYEPPQLLRH 194
>gi|448526873|ref|XP_003869406.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis Co 90-125]
gi|380353759|emb|CCG23271.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis]
Length = 382
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G E+ K+ +RLVRV E K+LL LMGIPY+ APCEAEAQ
Sbjct: 119 GTVDEVMKYEKRLVRVGRDQNDEAKKLLELMGIPYVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKV+A A+EDMD L + LLR
Sbjct: 164 CAELARGGKVFAAASEDMDTLCYEPPYLLRH 194
>gi|317374928|sp|C4YBJ8.2|FEN1_CLAL4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 376
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +E+ K+ +R VR S E K+LL LMGIPYI +AP EAEA
Sbjct: 118 TGTVEELMKYEKRTVRASREQNDEAKKLLELMGIPYI---------------VAPSEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A A+EDMD L + LLR
Sbjct: 163 QCAELARAGKVFAAASEDMDTLCYEPKYLLRH 194
>gi|260941263|ref|XP_002614798.1| hypothetical protein CLUG_05576 [Clavispora lusitaniae ATCC 42720]
gi|238851984|gb|EEQ41448.1| hypothetical protein CLUG_05576 [Clavispora lusitaniae ATCC 42720]
Length = 340
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +E+ K+ +R VR S E K+LL LMGIPYI +AP EAEA
Sbjct: 82 TGTVEELMKYEKRTVRASREQNDEAKKLLELMGIPYI---------------VAPSEAEA 126
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKV+A A+EDMD L + LLR
Sbjct: 127 QCAELARAGKVFAAASEDMDTLCYEPKYLLRH 158
>gi|221485037|gb|EEE23327.1| flap endonuclease-1, putative [Toxoplasma gondii GT1]
Length = 552
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E+ K R VRVS H ++ K LL LMG+P +E APCEAEAQ
Sbjct: 120 GNVEELRKQIVRSVRVSKQHNEDVKRLLRLMGLPVVE---------------APCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K KV+ATATED DALTFG L+R
Sbjct: 165 CAELTKNRKVWATATEDADALTFGATRLIR 194
>gi|237836211|ref|XP_002367403.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|211965067|gb|EEB00263.1| flap endonuclease-1, putative [Toxoplasma gondii ME49]
gi|221505908|gb|EEE31543.1| flap endonuclease-1, putative [Toxoplasma gondii VEG]
Length = 552
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E+ K R VRVS H ++ K LL LMG+P +E APCEAEAQ
Sbjct: 120 GNVEELRKQIVRSVRVSKQHNEDVKRLLRLMGLPVVE---------------APCEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA + K KV+ATATED DALTFG L+R
Sbjct: 165 CAELTKNRKVWATATEDADALTFGATRLIR 194
>gi|323457006|gb|EGB12872.1| hypothetical protein AURANDRAFT_19112 [Aureococcus anophagefferens]
Length = 396
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
DA+ I K++ L +VS + K+LL LMG+P ++ APCEAEAQC
Sbjct: 125 DAEGISKYSALLTKVSRKDCDDVKQLLRLMGVPVVD---------------APCEAEAQC 169
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +V+ GK +A TEDMDALTFG+ LR
Sbjct: 170 AELVRGGKAHAVGTEDMDALTFGSTRQLRN 199
>gi|320582300|gb|EFW96517.1| 5' to 3' exonuclease, 5' flap endonuclease [Ogataea parapolymorpha
DL-1]
Length = 374
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG +E+ +F +R V+V+ ++ + LL LMGIPY V+APCEAEA
Sbjct: 118 TGTVEELQRFEKRQVKVTREQNEQAQHLLRLMGIPY---------------VIAPCEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + + GKVYA A+EDMD L + LR
Sbjct: 163 QCAELARKGKVYAAASEDMDTLCYQPPFFLRN 194
>gi|448098848|ref|XP_004199006.1| Piso0_002405 [Millerozyma farinosa CBS 7064]
gi|359380428|emb|CCE82669.1| Piso0_002405 [Millerozyma farinosa CBS 7064]
Length = 343
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ +R VRV+ +E K+LL LMGIPY++ APCEAEAQCAA
Sbjct: 86 EDMVRYEKRTVRVTREQNQEAKKLLELMGIPYVD---------------APCEAEAQCAA 130
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ + GKV+A A+EDMD + + LLR
Sbjct: 131 LARKGKVFAAASEDMDTICYEPPFLLRH 158
>gi|146171182|ref|XP_001470841.1| flap endonuclease-1 [Tetrahymena thermophila]
gi|317376196|sp|A4VDN2.1|FEN1_TETTS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146145019|gb|EDK31639.1| flap endonuclease-1 [Tetrahymena thermophila SB210]
Length = 384
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TGD QE K +R + ++ + +LL L+G+P I LAPCEAEA
Sbjct: 121 TGDMQEALKQEQRNLHITKEMKADAIKLLQLVGVPVI---------------LAPCEAEA 165
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
QCAA+ KA KV+AT TEDMDALTF T LLR
Sbjct: 166 QCAALAKAKKVFATVTEDMDALTFATPFLLR 196
>gi|444323335|ref|XP_004182308.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
gi|387515355|emb|CCH62789.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K RRLV+V+ H +E K+LL LMGIPYI AP EAEAQC
Sbjct: 117 DIAEKIKHERRLVKVTKEHNEEAKKLLGLMGIPYI---------------TAPSEAEAQC 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + KAG VYA A+EDMD L + LLR
Sbjct: 162 AELAKAGVVYAAASEDMDTLCYRVPHLLRH 191
>gi|344303968|gb|EGW34217.1| hypothetical protein SPAPADRAFT_148774 [Spathaspora passalidarum
NRRL Y-27907]
Length = 377
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G E+ KF +RLVRVS E ++LL LMGIP + APCEAEAQ
Sbjct: 119 GTVAEVMKFEKRLVRVSRQQNDEARKLLELMGIPIVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKV+A A+EDMD L + LLR
Sbjct: 164 CAELARGGKVFAAASEDMDTLCYEPPYLLRH 194
>gi|340506781|gb|EGR32852.1| hypothetical protein IMG5_068750 [Ichthyophthirius multifiliis]
Length = 348
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E K +R + ++ + ++L L+G+P I+ APCEAEAQ
Sbjct: 122 GDMEEALKMEQRNLFITKDMKNDAIKMLQLLGVPVIQ---------------APCEAEAQ 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CAA+ KA KV+AT TEDMDALTFGT LLR
Sbjct: 167 CAALTKAKKVFATVTEDMDALTFGTPTLLR 196
>gi|317376215|sp|A5DCF5.3|FEN1_PICGU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 374
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
T +E+ ++ +R VRV+ E K+LL LMGIPY++ APCEAEA
Sbjct: 118 TATVEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVD---------------APCEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + AGKV+A A+EDMD L + LLR
Sbjct: 163 QCAELAVAGKVFAAASEDMDTLCYSPPYLLRH 194
>gi|146423306|ref|XP_001487583.1| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC
6260]
Length = 338
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
T +E+ ++ +R VRV+ E K+LL LMGIPY++ APCEAEA
Sbjct: 82 TATVEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVD---------------APCEAEA 126
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + AGKV+A A+EDMD L + LLR
Sbjct: 127 QCAELAVAGKVFAAASEDMDTLCYSPPYLLRH 158
>gi|190345050|gb|EDK36862.2| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC
6260]
Length = 338
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
T +E+ ++ +R VRV+ E K+LL LMGIPY++ APCEAEA
Sbjct: 82 TATVEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVD---------------APCEAEA 126
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + AGKV+A A+EDMD L + LLR
Sbjct: 127 QCAELAVAGKVFAAASEDMDTLCYSPPYLLRH 158
>gi|303279240|ref|XP_003058913.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460073|gb|EEH57368.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 360
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 15/97 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +EI+K ++R VRV+ +E +L LMG+P E APCEAEA
Sbjct: 119 GDQEEIEKMSKRTVRVTRQQSQEVMQLARLMGLPVFE---------------APCEAEAS 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CAA+ KAG VYA A+EDMD L F L R +S A+
Sbjct: 164 CAALCKAGLVYAAASEDMDTLCFACPKLARNLMSPAS 200
>gi|290997255|ref|XP_002681197.1| predicted protein [Naegleria gruberi]
gi|317374913|sp|D2V434.1|FEN1_NAEGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|284094820|gb|EFC48453.1| predicted protein [Naegleria gruberi]
Length = 387
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +++ +N+R R++ + K+LL LMG+P +E AP EAEAQ
Sbjct: 118 GDEEKMVMWNKRTTRMTKEQSNDGKKLLRLMGVPVVE---------------APGEAEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G VYATATEDMDALT+ T +L R
Sbjct: 163 CAELCKGGLVYATATEDMDALTYATPVLARH 193
>gi|429962587|gb|ELA42131.1| hypothetical protein VICG_00772 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
Query: 8 LTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAE 67
L D +E+DK +R V+V HV +CK L LMG+P+ V A E+E
Sbjct: 115 LEEDKKEMDKHEKRKVKVEESHVDDCKRLFRLMGVPF---------------VTAESESE 159
Query: 68 AQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
A C+ + K G V A ATEDMDAL FG ILLR
Sbjct: 160 AYCSLLCKRGVVKAVATEDMDALCFGAPILLR 191
>gi|294658624|ref|XP_460967.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
gi|317374925|sp|Q6BLF4.2|FEN1_DEBHA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|202953266|emb|CAG89325.2| DEHA2F13882p [Debaryomyces hansenii CBS767]
Length = 379
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++ ++ +R VRV+ E K+LL LMG+PY+ APCEAEAQ
Sbjct: 119 GTIEDMVRYEKRTVRVTREQNDEAKKLLELMGVPYVN---------------APCEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + + GKV+A A+EDMD + + LLR
Sbjct: 164 CAELARGGKVFAAASEDMDTICYQPPFLLRH 194
>gi|448102657|ref|XP_004199858.1| Piso0_002405 [Millerozyma farinosa CBS 7064]
gi|359381280|emb|CCE81739.1| Piso0_002405 [Millerozyma farinosa CBS 7064]
Length = 343
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ +R VRV+ +E K+LL LMGIPY++ APCEAEAQCA
Sbjct: 86 EDMVRYEKRTVRVTREQNQEAKKLLELMGIPYVD---------------APCEAEAQCAE 130
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ + GKV+A A+EDMD + + LLR
Sbjct: 131 LARKGKVFAAASEDMDTICYEPPFLLRH 158
>gi|412993680|emb|CCO14191.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TGD I+K +R VRVS +E L+ L+G+P E APCEAEA
Sbjct: 118 TGDKDAIEKAAKRTVRVSKEQNQEVMRLVKLLGVPVFE---------------APCEAEA 162
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
CAAM KAG V+ ATEDMD LTF L+R ++ A+
Sbjct: 163 TCAAMCKAGLVHGAATEDMDTLTFACPRLIRNLMAPAS 200
>gi|403358237|gb|EJY78757.1| Flap endonuclease 1-1 [Oxytricha trifallax]
Length = 967
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + R V+V+ +++ K+LL LMG P I+ AP EAEAQ
Sbjct: 123 GDMEGAKRMAGRSVKVTWDMMRDAKKLLRLMGCPVID---------------APGEAEAQ 167
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA +VK G +ATA+EDMD+LTFGT +LLR
Sbjct: 168 CAHLVKLGLAFATASEDMDSLTFGTKVLLR 197
>gi|340501530|gb|EGR28305.1| hypothetical protein IMG5_178850 [Ichthyophthirius multifiliis]
Length = 322
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 15/83 (18%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K +R + ++ + ++L L+G P IE AP EAEAQCAA+ K
Sbjct: 105 KMEQRNIFITQEMKNDAIKMLKLLGFPVIE---------------APGEAEAQCAALTKT 149
Query: 77 GKVYATATEDMDALTFGTNILLR 99
G+V+AT TEDMDALTFGT ILLR
Sbjct: 150 GQVFATVTEDMDALTFGTTILLR 172
>gi|221222286|gb|ACM09804.1| Flap endonuclease 1-A [Salmo salar]
Length = 192
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 15/68 (22%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
G+ + IDKF++RLV+V+ H ECK+LL+LMG+PYIE APCEAEA
Sbjct: 117 AGEQENIDKFSKRLVKVTQQHNDECKKLLTLMGVPYIE---------------APCEAEA 161
Query: 69 QCAAMVKA 76
CAA+VKA
Sbjct: 162 SCAALVKA 169
>gi|317374922|sp|Q013G9.2|FEN1_OSTTA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 389
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E++K ++R VRVS E +L L+GIP E APCEAEA
Sbjct: 119 GNQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFE---------------APCEAEAT 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAM KAG V+A TEDMD LTF + R
Sbjct: 164 CAAMCKAGLVWAVGTEDMDTLTFAAPRVARN 194
>gi|308806964|ref|XP_003080793.1| FEN-1 (ISS) [Ostreococcus tauri]
gi|116059254|emb|CAL54961.1| FEN-1 (ISS) [Ostreococcus tauri]
Length = 428
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E++K ++R VRVS E +L L+GIP E APCEAEA
Sbjct: 158 GNQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFE---------------APCEAEAT 202
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAAM KAG V+A TEDMD LTF + R
Sbjct: 203 CAAMCKAGLVWAVGTEDMDTLTFAAPRVARN 233
>gi|389852752|ref|YP_006354986.1| flap endonuclease-1 [Pyrococcus sp. ST04]
gi|388250058|gb|AFK22911.1| flap endonuclease-1 [Pyrococcus sp. ST04]
Length = 341
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ +R RV+ + +++ K+LL LMGIP I+ AP E
Sbjct: 109 LAKGDIEEARKYAQRATRVNEMLIEDAKKLLELMGIPVIQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M GKVYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMASKGKVYASASQDYDSLLFGAPRLVR 186
>gi|269859663|ref|XP_002649556.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
gi|317374899|sp|B7XHS8.1|FEN1_ENTBH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220067107|gb|EED44575.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
Length = 358
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 22/103 (21%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
+ K++R V++ H++EC++ L L+ IPY V+AP EAEA CA +
Sbjct: 122 VSKYDRMNVKMEKSHIEECQKTLRLLNIPY---------------VIAPSEAEAYCAWLC 166
Query: 75 KAGKVYATATEDMDALTFGTNILLR-------QQLSWATFSMH 110
K+ V A ATEDMD+L FG+ +LLR Q+L +++H
Sbjct: 167 KSKFVDAVATEDMDSLCFGSPLLLRNFNTALSQKLPVEEYNLH 209
>gi|119192254|ref|XP_001246733.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 368
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 28/92 (30%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++++KF+RR VRV+ H +E AP EAEA
Sbjct: 103 TGTAEDVEKFSRRTVRVTREHNEE----------------------------YAPTEAEA 134
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA + +AGKVYA A+EDMD L F + ILLR
Sbjct: 135 QCAVLARAGKVYAAASEDMDTLCFDSPILLRH 166
>gi|126653087|ref|XP_001388383.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
gi|317374887|sp|A3FPN7.1|FEN1_CRYPI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126117476|gb|EAZ51576.1| flap endonuclease 1 [Cryptosporidium parvum Iowa II]
Length = 490
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K + R + V+ V++ K+LL +G+P I+ AP EAEAQ
Sbjct: 120 GDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCID---------------APSEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G VY TED D+LTFGT I ++Q
Sbjct: 165 CAELCKDGLVYGVVTEDADSLTFGTPIQIKQ 195
>gi|67610024|ref|XP_667077.1| flap endonuclease 1 [Cryptosporidium hominis TU502]
gi|54658174|gb|EAL36849.1| flap endonuclease 1 [Cryptosporidium hominis]
Length = 454
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K + R + V+ V++ K+LL +G+P I+ AP EAEAQ
Sbjct: 84 GDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCID---------------APSEAEAQ 128
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G VY TED D+LTFGT I ++Q
Sbjct: 129 CAELCKDGLVYGVVTEDADSLTFGTPIQIKQ 159
>gi|14520948|ref|NP_126423.1| flap endonuclease-1 [Pyrococcus abyssi GE5]
gi|28380024|sp|Q9V0P9.1|FEN_PYRAB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|5458165|emb|CAB49654.1| fen1 FLAP endonuclease-1 [Pyrococcus abyssi GE5]
gi|380741502|tpe|CCE70136.1| TPA: flap endonuclease-1 [Pyrococcus abyssi GE5]
Length = 343
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ +R +V+ + +++ K+LL LMGIP ++ AP E
Sbjct: 109 LAKGDIEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA+A++D D+L FGT L+R
Sbjct: 154 EAQAAYMAGKGDVYASASQDYDSLLFGTPRLVR 186
>gi|315230863|ref|YP_004071299.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
gi|315183891|gb|ADT84076.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
Length = 342
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ +R RV+ +++ K+LL LMGIP+++ AP E
Sbjct: 109 LARGDLEEAKKYAQRASRVNEQLIEDAKKLLELMGIPWVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M GKV+A+A++D D+L FG L+R
Sbjct: 154 EAQAAYMASKGKVWASASQDYDSLLFGAPRLVR 186
>gi|399218750|emb|CCF75637.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TGD +EI K R VRVS K+ + L L G+P +E S+ EAEA
Sbjct: 119 TGDLEEIKKQTSRTVRVSREQSKQAMKFLELCGLPVVEASQ---------------EAEA 163
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
QCA MVK G +TED D LTFGT +L+R
Sbjct: 164 QCAYMVKWGIADVASTEDTDCLTFGTPVLIRN 195
>gi|156042752|ref|XP_001587933.1| hypothetical protein SS1G_11175 [Sclerotinia sclerotiorum 1980]
gi|154695560|gb|EDN95298.1| hypothetical protein SS1G_11175 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 387
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 15/70 (21%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
TG A++I+KF+RR VRV+ H EC++LL LMGIP+I +AP EAEA
Sbjct: 129 TGTAEDIEKFSRRTVRVTREHNAECQKLLKLMGIPFI---------------IAPTEAEA 173
Query: 69 QCAAMVKAGK 78
QCA + +AGK
Sbjct: 174 QCAVLARAGK 183
>gi|403347702|gb|EJY73284.1| FEN-1 nuclease [Oxytricha trifallax]
Length = 392
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD ++ K +R V+V+ V++ K L+ MG P + AP EAEA
Sbjct: 114 GDEFKMAKMAQRTVKVTKSMVEDAKRLVKAMGFPVVH---------------APGEAEAF 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
CA +VK GK +AT +EDMD+LTFG+ ++R
Sbjct: 159 CAYLVKEGKAFATVSEDMDSLTFGSPFMIR 188
>gi|409095300|ref|ZP_11215324.1| flap endonuclease-1 [Thermococcus zilligii AN1]
Length = 340
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ R RV+ + + K+LL LMGIP ++ AP E
Sbjct: 109 LEKGDLEEAKKYAMRATRVNEELISDAKKLLELMGIPVVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M GKVYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMAAKGKVYASASQDYDSLLFGAPKLVR 186
>gi|375083121|ref|ZP_09730153.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
gi|374742207|gb|EHR78613.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
Length = 340
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ +R +V+ + +++ K+LL LMGIP+++ AP E
Sbjct: 109 LARGDLEEAKKYAQRASKVNEMLIEDAKKLLELMGIPWVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G V+A+A++D D+L FGT L+R
Sbjct: 154 EAQAAYMASKGHVWASASQDYDSLLFGTPRLVR 186
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + +RR V+V+ H K+ ++LL ++GIPY V+A EAEAQ
Sbjct: 119 GDIERAKQLSRRTVKVTQQHCKQAEKLLDILGIPY---------------VVAAGEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
C AM KAG A+ D+D L FG+ L+R
Sbjct: 164 CVAMAKAGLCEGVASSDLDVLAFGSPSLIR 193
>gi|332157650|ref|YP_004422929.1| flap endonuclease-1 [Pyrococcus sp. NA2]
gi|331033113|gb|AEC50925.1| flap endonuclease-1 [Pyrococcus sp. NA2]
Length = 342
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ +R +V+ + +++ K+LL LMGIP ++ AP E
Sbjct: 109 LARGDIEEARKYAQRATKVNEMLIEDAKQLLQLMGIPIVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMAMKGDVYASASQDYDSLLFGAPRLVR 186
>gi|20094004|ref|NP_613851.1| flap endonuclease-1 [Methanopyrus kandleri AV19]
gi|28380017|sp|Q8TXU4.1|FEN_METKA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19886972|gb|AAM01781.1| 5'-3' exonuclease [Methanopyrus kandleri AV19]
Length = 348
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E +K+ R++ R+ V++ K LL LMGIP+++ AP E EAQCA
Sbjct: 112 EEREKYARQVARLDESLVEDAKRLLDLMGIPWVQ---------------APSEGEAQCAY 156
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
M + G V+AT ++D D+L FG+ L+R
Sbjct: 157 MARCGDVWATGSQDYDSLLFGSPRLVR 183
>gi|18977786|ref|NP_579143.1| flap endonuclease-1 [Pyrococcus furiosus DSM 3638]
gi|397651906|ref|YP_006492487.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
gi|28380014|sp|O93634.1|FEN_PYRFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|6980604|pdb|1B43|A Chain A, Fen-1 From P. Furiosus
gi|6980605|pdb|1B43|B Chain B, Fen-1 From P. Furiosus
gi|4102602|gb|AAD01514.1| endo/exonuclease [Pyrococcus furiosus DSM 3638]
gi|18893531|gb|AAL81538.1| flap structure-specific endonuclease [Pyrococcus furiosus DSM 3638]
gi|393189497|gb|AFN04195.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
Length = 340
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ +R RV+ + +++ K+LL LMGIP ++ AP E
Sbjct: 109 LEKGEIEEARKYAQRATRVNEMLIEDAKKLLELMGIPIVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMAAKGSVYASASQDYDSLLFGAPRLVR 186
>gi|24987745|pdb|1MC8|A Chain A, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
gi|24987746|pdb|1MC8|B Chain B, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
Length = 343
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ +R +V+ + +++ K+LL LMGIP I+ AP E
Sbjct: 109 LAKGNLEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIIQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMASKGDVYASASQDYDSLLFGAPRLIR 186
>gi|242398519|ref|YP_002993943.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
gi|259645975|sp|C6A1U9.1|FEN_THESM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|242264912|gb|ACS89594.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM
739]
Length = 340
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ +R +++ + +++ K+LL LMGIP+++ AP E
Sbjct: 109 LARGELEEAKKYAQRASKINEILIEDAKKLLELMGIPWVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G V+A+A++D D+L FGT L+R
Sbjct: 154 EAQAAYMASKGDVWASASQDYDSLLFGTPKLVR 186
>gi|14591211|ref|NP_143287.1| flap endonuclease-1 [Pyrococcus horikoshii OT3]
gi|28380013|sp|O50123.1|FEN_PYRHO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3257838|dbj|BAA30521.1| 343aa long hypothetical 5' nuclease [Pyrococcus horikoshii OT3]
Length = 343
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ +R +V+ + +++ K+LL LMGIP I+ AP E
Sbjct: 109 LAKGNLEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIIQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMASKGDVYASASQDYDSLLFGAPRLIR 186
>gi|209879882|ref|XP_002141381.1| Flap endonuclease 1 [Cryptosporidium muris RN66]
gi|317374886|sp|B6AFP1.1|FEN1_CRYMR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|209556987|gb|EEA07032.1| Flap endonuclease 1, putative [Cryptosporidium muris RN66]
Length = 472
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K R ++++ + K +L L+GIP IE A EAEAQ
Sbjct: 120 GDTETIRKQLIRTIKITKEQSDDVKYMLKLLGIPVIE---------------ATSEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA + K G VY ATED D+LTFGT +++R
Sbjct: 165 CAELCKEGLVYGVATEDADSLTFGTPLVIRH 195
>gi|428672546|gb|EKX73459.1| flap endonuclease-1, putative [Babesia equi]
Length = 746
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD++ I K R V+VS K+LL LMGIP +E A EAEAQ
Sbjct: 120 GDSETIKKLVGRTVKVSKEQNNSAKQLLRLMGIPVVE---------------AKEEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +V+ G A A+ED D+L FG ILLR
Sbjct: 165 CAQLVQEGIATAVASEDSDSLVFGCRILLRN 195
>gi|289192094|ref|YP_003458035.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
gi|288938544|gb|ADC69299.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
Length = 326
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +E K+ +R+ ++ V+ CK LLSLMGIPY+E AP E EAQ
Sbjct: 113 DFEEAAKYAKRVSYLTPKMVENCKYLLSLMGIPYVE---------------APSEGEAQA 157
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V+A ++D DAL +G+ ++R
Sbjct: 158 SYMAKKGDVWAVVSQDYDALLYGSPRVVRN 187
>gi|390961742|ref|YP_006425576.1| flap endonuclease-1 [Thermococcus sp. CL1]
gi|390520050|gb|AFL95782.1| flap endonuclease-1 [Thermococcus sp. CL1]
Length = 341
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E K+ R RV+ + + K+LL LMGIP I+ AP E EAQ
Sbjct: 112 GDLEEAKKYAMRATRVNEGLINDAKKLLELMGIPVIQ---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M KVYA+A++D D+L FG L+R
Sbjct: 157 AAYMAAKKKVYASASQDYDSLLFGAPRLVR 186
>gi|348500556|ref|XP_003437839.1| PREDICTED: probable flap endonuclease 1 homolog [Oreochromis
niloticus]
Length = 348
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 15/76 (19%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
+S KEC +LL +G+P I+ AP +AEA CA +V+ G V+A A+
Sbjct: 102 TASSQTKECLQLLKCLGVPVIQ---------------APGDAEALCAQLVREGTVHAVAS 146
Query: 85 EDMDALTFGTNILLRQ 100
EDMD L FG NIL+RQ
Sbjct: 147 EDMDTLPFGANILIRQ 162
>gi|337283806|ref|YP_004623280.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
gi|334899740|gb|AEH24008.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
Length = 341
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ +R RV+ V++ K+LL LMGIP I+ AP E EAQ
Sbjct: 112 GNIEEARKYAQRATRVNEALVEDAKKLLELMGIPVIQ---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G VYA+A++D D+L FG L+R
Sbjct: 157 AAYIAAKGAVYASASQDYDSLLFGAPRLVR 186
>gi|256064183|ref|XP_002570412.1| flap endonuclease-1 [Schistosoma mansoni]
Length = 241
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 15/61 (24%)
Query: 40 MGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
MG+P++ AP EAEAQCA + K+GKVYA TEDMDAL FGT +LLR
Sbjct: 1 MGVPFVN---------------APGEAEAQCAVLAKSGKVYAVGTEDMDALAFGTPVLLR 45
Query: 100 Q 100
Sbjct: 46 H 46
>gi|150401914|ref|YP_001325680.1| flap endonuclease-1 [Methanococcus aeolicus Nankai-3]
gi|166973699|sp|A6UX46.1|FEN_META3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150014617|gb|ABR57068.1| XPG I [Methanococcus aeolicus Nankai-3]
Length = 326
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K+ +R+ + V CK+LL LMGIPYI+ AP E EAQCA
Sbjct: 115 EDMQKYAKRINYLEPNTVDNCKKLLKLMGIPYID---------------APSEGEAQCAH 159
Query: 73 MVKAGKVYATATEDMDALTFG 93
M+K G Y ++D DAL +G
Sbjct: 160 MIKNGDAYCVVSQDYDALLYG 180
>gi|212224248|ref|YP_002307484.1| flap endonuclease-1 [Thermococcus onnurineus NA1]
gi|226700956|sp|B6YWX4.1|FEN_THEON RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|212009205|gb|ACJ16587.1| flap structure-specific endonuclease [Thermococcus onnurineus NA1]
Length = 341
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E K+ R RV+ + + K LL LMGIP I+ AP E EAQ
Sbjct: 112 GDLEEAKKYAMRATRVNEGLINDAKTLLELMGIPVIQ---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M KVYA+A++D D+L FG L+R
Sbjct: 157 AAYMAAKKKVYASASQDYDSLLFGAPKLVR 186
>gi|357621466|gb|EHJ73288.1| flap endonuclease-1 [Danaus plexippus]
Length = 322
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 38/64 (59%), Gaps = 15/64 (23%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD IDKFNRRLV+V+ H E ++LL LMGIP +E APCEAEAQ
Sbjct: 118 GDTASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVE---------------APCEAEAQ 162
Query: 70 CAAM 73
CA +
Sbjct: 163 CAEL 166
>gi|15669635|ref|NP_248448.1| flap endonuclease-1 [Methanocaldococcus jannaschii DSM 2661]
gi|17432937|sp|Q58839.1|FEN_METJA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157829719|pdb|1A76|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|157829720|pdb|1A77|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|1592090|gb|AAB99454.1| DNA repair protein RAD2 (rad2) [Methanocaldococcus jannaschii DSM
2661]
Length = 326
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +E K+ +R+ ++ V+ CK LLSLMGIPY+E AP E EAQ
Sbjct: 113 DFEEAAKYAKRVSYLTPKMVENCKYLLSLMGIPYVE---------------APSEGEAQA 157
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V+A ++D DAL +G ++R
Sbjct: 158 SYMAKKGDVWAVVSQDYDALLYGAPRVVRN 187
>gi|256810959|ref|YP_003128328.1| flap endonuclease-1 [Methanocaldococcus fervens AG86]
gi|256794159|gb|ACV24828.1| flap structure-specific endonuclease [Methanocaldococcus fervens
AG86]
Length = 326
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +E K+ +R+ ++ V+ CK LLSLMGIPY+E AP E EAQ
Sbjct: 113 DFEEAAKYAKRVSYLTPKIVENCKYLLSLMGIPYVE---------------APSEGEAQA 157
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V+A ++D DAL +G ++R
Sbjct: 158 SYMAKKGDVWAVVSQDYDALLYGAPRVVRN 187
>gi|336122204|ref|YP_004576979.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
gi|334856725|gb|AEH07201.1| Flap structure-specific endonuclease [Methanothermococcus
okinawensis IH1]
Length = 324
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +++ K+ +R+ + V+ K LL+LMGIP+I AP E EAQ
Sbjct: 112 GNLEDMQKYAKRINYLEPKVVENSKRLLNLMGIPFIN---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFG 93
C+ M K G VYA ++D DAL +G
Sbjct: 157 CSYMAKKGDVYAVVSQDYDALLYG 180
>gi|223477291|ref|YP_002581507.1| Flap structure-specific endonuclease [Thermococcus sp. AM4]
gi|214032517|gb|EEB73347.1| Flap structure-specific endonuclease [Thermococcus sp. AM4]
Length = 339
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ R +++ +++ K+LL LMG+P ++ AP E
Sbjct: 109 LERGDIEEAKKYAMRATKLNETLIEDAKKLLGLMGVPVVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M KVYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMASKKKVYASASQDYDSLLFGAPRLVRN 187
>gi|429217578|ref|YP_007175568.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
gi|429134107|gb|AFZ71119.1| flap structure-specific endonuclease [Caldisphaera lagunensis DSM
15908]
Length = 351
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E K+ + +S+ V++ K+LL+ MGIP+++ AP + EAQ
Sbjct: 118 GKIEEAKKYAQASTSLSNKMVEDAKQLLTYMGIPWVQ---------------APADGEAQ 162
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K G VYAT ++D D+L FG+ LLR
Sbjct: 163 AAYMAKKGDVYATGSQDYDSLLFGSPKLLR 192
>gi|269986761|gb|EEZ93040.1| XPG I domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 332
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
A+E + RRL R+ + KELLS +GIPY++ AP E EAQ A
Sbjct: 111 AEEKAMYMRRLSRIDDYIIDSSKELLSYLGIPYVQ---------------APAEGEAQAA 155
Query: 72 AMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ GKV+A A++D D L FG ++R
Sbjct: 156 QLNMQGKVFAAASQDYDTLLFGAKKVVRN 184
>gi|57641216|ref|YP_183694.1| flap endonuclease-1 [Thermococcus kodakarensis KOD1]
gi|73919352|sp|Q5JGN0.1|FEN_PYRKO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57159540|dbj|BAD85470.1| flap structure-specific endonuclease [Thermococcus kodakarensis
KOD1]
Length = 340
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ R RV+ + + K+LL LMGIP ++ AP E
Sbjct: 109 LEKGDLEEAKKYAMRATRVNEELINDAKKLLELMGIPVVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMAAKKAVYASASQDYDSLLFGAPRLVR 186
>gi|341583087|ref|YP_004763579.1| flap endonuclease-1 [Thermococcus sp. 4557]
gi|340810745|gb|AEK73902.1| flap endonuclease-1 [Thermococcus sp. 4557]
Length = 341
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R RV+ + + K LL LMGIP I+ AP E EAQ
Sbjct: 112 GNLEEAKKYAMRATRVNEGLINDAKRLLELMGIPVIQ---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M KVYA+A++D D+L FG L+R
Sbjct: 157 AAYMAARKKVYASASQDYDSLLFGAPRLVR 186
>gi|387592620|gb|EIJ87644.1| flap endonuclease 1-B [Nematocida parisii ERTm3]
Length = 371
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K +R VR + HV+ + LL +MGIPY+ AP EAE CAA
Sbjct: 118 EEKVKHAKRTVRATKYHVESAQHLLKVMGIPYM---------------TAPNEAEGFCAA 162
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ G V +EDMD+L FG ILLR
Sbjct: 163 LNICGAVNGVVSEDMDSLAFGGKILLRN 190
>gi|387595247|gb|EIJ92872.1| flap endonuclease 1-B [Nematocida parisii ERTm1]
Length = 342
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K +R VR + HV+ + LL +MGIPY+ AP EAE CAA
Sbjct: 118 EEKVKHAKRTVRATKYHVESAQHLLKVMGIPYM---------------TAPNEAEGFCAA 162
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+ G V +EDMD+L FG ILLR
Sbjct: 163 LNICGAVNGVVSEDMDSLAFGGKILLR 189
>gi|170291015|ref|YP_001737831.1| flap endonuclease-1 [Candidatus Korarchaeum cryptofilum OPF8]
gi|226700953|sp|B1L6R9.1|FEN_KORCO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170175095|gb|ACB08148.1| XPG I domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 342
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K+ + + ++ V++CK +L LMG+P ++ AP E
Sbjct: 110 LEIGDLEEARKYAQAALNITGDIVEDCKTILKLMGVPIVQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G V+ATA++D D+L FG L+R
Sbjct: 155 EAQAAHMAMKGDVWATASQDYDSLLFGAPRLIR 187
>gi|432911452|ref|XP_004078686.1| PREDICTED: probable flap endonuclease 1 homolog [Oryzias latipes]
Length = 343
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 15/76 (19%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
++S ++C E+L +G+P ++ AP +AE CA++V+ G+ +A A+
Sbjct: 102 IASSQTRDCLEVLKHLGVPVVQ---------------APGDAEGLCASLVREGRAHAVAS 146
Query: 85 EDMDALTFGTNILLRQ 100
EDMD L FG N+L+RQ
Sbjct: 147 EDMDTLPFGANVLIRQ 162
>gi|397621116|gb|EJK66115.1| hypothetical protein THAOC_12982 [Thalassiosira oceanica]
Length = 434
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 15/92 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD +E DK +RLVR ++ K LL+LMG+P I AEA
Sbjct: 122 SGDVEEQDKHTKRLVRAGHKENEDIKRLLTLMGVPIINAPCE---------------AEA 166
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
Q AA+ KAGKVYATATEDMDALTF T I +R+
Sbjct: 167 QAAALAKAGKVYATATEDMDALTFQTPIQVRK 198
>gi|374327648|ref|YP_005085848.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
gi|356642917|gb|AET33596.1| flap endonuclease-1 [Pyrobaculum sp. 1860]
Length = 346
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
E+ L G +++ K+ +R V ++S V+E ++LLS MG+P+++
Sbjct: 108 EVVKALKEGRKEDVIKYAKRAVFITSEMVEESRKLLSYMGVPWVQ--------------- 152
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ A MV G +A ++D DAL FG+ L+R
Sbjct: 153 APSEGEAQAAYMVVKGHCWAVGSQDYDALLFGSPRLVRN 191
>gi|166085107|dbj|BAF99818.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ R++S V+E KELL MG+P+++ AP E
Sbjct: 79 LEAGEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEG 123
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M + G +AT ++D D+L FG+ L+R
Sbjct: 124 EAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
>gi|166085105|dbj|BAF99817.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ R++S V+E KELL MG+P+++ AP E
Sbjct: 79 LEAGEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEG 123
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M + G +AT ++D D+L FG+ L+R
Sbjct: 124 EAQAAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
>gi|77640971|ref|NP_146975.2| flap endonuclease-1 [Aeropyrum pernix K1]
gi|150421551|sp|Q9YFY5.3|FEN_AERPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116062210|dbj|BAA79026.2| flap structure-specific endonuclease [Aeropyrum pernix K1]
Length = 350
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R++S V+E KELL MG+P+++ AP E EAQ
Sbjct: 115 GEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEGEAQ 159
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M + G +AT ++D D+L FG+ L+R
Sbjct: 160 AAYMARKGDAWATGSQDYDSLLFGSPRLVR 189
>gi|119719220|ref|YP_919715.1| flap endonuclease-1 [Thermofilum pendens Hrk 5]
gi|166973708|sp|A1RWY2.1|FEN_THEPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119524340|gb|ABL77712.1| flap endonuclease 1 [Thermofilum pendens Hrk 5]
Length = 346
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E + ++ R+++ V + K LL MG+PY+E AP E EAQ
Sbjct: 114 GDLEEARIYAQQTSRLTAAMVHDAKLLLRYMGVPYVE---------------APSEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A MVK G +A+ ++D D+L FG+ L+R
Sbjct: 159 AAYMVKKGDAWASGSQDFDSLLFGSPRLVR 188
>gi|330835718|ref|YP_004410446.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
gi|329567857|gb|AEB95962.1| flap endonuclease-1 [Metallosphaera cuprina Ar-4]
Length = 301
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ R++S E K LLSLMGIP ++ AP E EA+
Sbjct: 65 GKIEEVRKYSQMTSRLTSSMANEGKRLLSLMGIPTVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M G VYA A++D D+L FG L+R
Sbjct: 110 AAYMNSQGLVYAAASQDYDSLLFGATRLIRN 140
>gi|166085113|dbj|BAF99821.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R++S V+E KELL MG+P+++ AP E EAQ
Sbjct: 82 GEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEGEAQ 126
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +AT ++D D+L FG+ L+R
Sbjct: 127 AAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
>gi|166085109|dbj|BAF99819.1| flap endonuclease-1 [Aeropyrum pernix]
gi|166085111|dbj|BAF99820.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 317
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R++S V+E KELL MG+P+++ AP E EAQ
Sbjct: 82 GEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEGEAQ 126
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +AT ++D D+L FG+ L+R
Sbjct: 127 AAYMARKGDAWATGSQDYDSLLFGSPRLVRN 157
>gi|166085101|dbj|BAF99815.1| flap endonuclease-1 [Aeropyrum pernix]
gi|166085103|dbj|BAF99816.1| flap endonuclease-1 [Aeropyrum pernix]
Length = 401
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R++S V+E KELL MG+P+++ AP E EAQ
Sbjct: 166 GEVEEARKYAMMAARLTSDMVEESKELLDAMGMPWVQ---------------APAEGEAQ 210
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M + G +AT ++D D+L FG+ L+R
Sbjct: 211 AAYMARKGDAWATGSQDYDSLLFGSPRLVR 240
>gi|389860888|ref|YP_006363128.1| flap endonuclease-1 [Thermogladius cellulolyticus 1633]
gi|388525792|gb|AFK50990.1| flap endonuclease-1 [Thermogladius cellulolyticus 1633]
Length = 353
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++S V+E K LL +MGIP+++ AP E EAQ
Sbjct: 116 GDLEAARRYAMMSSKLTSDMVEEAKRLLKVMGIPWVQ---------------APAEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A MV+ G YA+A++D D+L FG+ L+R
Sbjct: 161 AAFMVRRGDAYASASQDYDSLLFGSPRLVR 190
>gi|296108985|ref|YP_003615934.1| flap structure-specific endonuclease [methanocaldococcus infernus
ME]
gi|295433799|gb|ADG12970.1| flap structure-specific endonuclease [Methanocaldococcus infernus
ME]
Length = 323
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E ++ +RL V+ ++ CK LLSLMGIPY++ AP E EAQ
Sbjct: 110 DEIERARYFKRLSYVNKDMIENCKYLLSLMGIPYVQ---------------APSEGEAQA 154
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V+A ++D D+L +G ++R
Sbjct: 155 SYMAKKGDVWAVVSQDYDSLLYGAPRVVRN 184
>gi|378754698|gb|EHY64727.1| flap endonuclease 1-B [Nematocida sp. 1 ERTm2]
Length = 342
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 15/83 (18%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K +R VR + HV+ + LLS MG+PY+ AP EAE CAA+ A
Sbjct: 122 KHAKRTVRATKYHVESAQALLSAMGVPYM---------------TAPNEAEGFCAALNIA 166
Query: 77 GKVYATATEDMDALTFGTNILLR 99
V +EDMD+L FG +LLR
Sbjct: 167 NAVNGVVSEDMDSLAFGGKVLLR 189
>gi|18312112|ref|NP_558779.1| flap endonuclease-1 [Pyrobaculum aerophilum str. IM2]
gi|28380018|sp|Q8ZYN2.1|FEN_PYRAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|18159543|gb|AAL62961.1| DNA endonuclease rad2 homolog [Pyrobaculum aerophilum str. IM2]
Length = 346
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++ K+ +R V ++S V E K LLS MG+P+++ AP E EAQ
Sbjct: 116 GRREDVAKYAKRAVFITSEMVDEAKRLLSYMGVPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +A ++D D+L FG+ L+R
Sbjct: 161 AAYMARKGHCWAVGSQDYDSLLFGSPKLVRN 191
>gi|384433639|ref|YP_005642997.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
gi|261601793|gb|ACX91396.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
Length = 351
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K+LL MGIP ++ AP E EA+
Sbjct: 114 GKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQ---------------APSEGEAE 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + K G +A A++D DA+ FG L+R
Sbjct: 159 AAYLNKLGLSWAAASQDYDAILFGAKRLVR 188
>gi|116668192|pdb|2IZO|A Chain A, Structure Of An Archaeal Pcna1-Pcna2-Fen1 Complex
Length = 346
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K+LL MGIP ++ AP E EA+
Sbjct: 109 GKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQ---------------APSEGEAE 153
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + K G +A A++D DA+ FG L+R
Sbjct: 154 AAYLNKLGLSWAAASQDYDAILFGAKRLVR 183
>gi|28380021|sp|Q980U8.2|FEN_SULSO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K+LL MGIP ++ AP E EA+
Sbjct: 112 GKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQ---------------APSEGEAE 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + K G +A A++D DA+ FG L+R
Sbjct: 157 AAYLNKLGLSWAAASQDYDAILFGAKRLVR 186
>gi|224006087|ref|XP_002292004.1| exonuclease [Thalassiosira pseudonana CCMP1335]
gi|317376197|sp|B8C6S5.1|FEN1_THAPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220972523|gb|EED90855.1| exonuclease [Thalassiosira pseudonana CCMP1335]
Length = 390
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 16/100 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+G+ +E DK ++RLVR + ++C +LL+LMG+P I AEA
Sbjct: 124 SGNIEEQDKQSKRLVRAGTKENEDCIKLLTLMGVPVIRAPCE---------------AEA 168
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFS 108
Q AA+ ++GKVYA ATEDMDALTF + +++R ++++A S
Sbjct: 169 QAAALARSGKVYAAATEDMDALTFRSPVMVR-KMTFANAS 207
>gi|410924704|ref|XP_003975821.1| PREDICTED: probable flap endonuclease 1 homolog [Takifugu rubripes]
Length = 297
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 17/82 (20%)
Query: 19 NRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGK 78
NR+ SS ++C +LL L+G+P I+ AP +AEA CA +VK G
Sbjct: 98 NRKGTASSST--RDCLQLLKLIGVPVIQ---------------APGDAEALCAWLVKEGT 140
Query: 79 VYATATEDMDALTFGTNILLRQ 100
V A A+EDMD L FG +IL+RQ
Sbjct: 141 VDAVASEDMDTLPFGASILIRQ 162
>gi|225543341|ref|NP_001017611.2| probable flap endonuclease 1 homolog [Danio rerio]
gi|317374871|sp|B0UXL7.1|FEN1B_DANRE RecName: Full=Probable flap endonuclease 1 homolog; Short=FEN-1
homolog; AltName: Full=Flap structure-specific
endonuclease 1 homolog
Length = 350
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
S +EC LL LMG+P I+ AP EAEA CA + K G V A A+
Sbjct: 105 TGSAFNQECLRLLHLMGVPCIK---------------APGEAEALCAHLAKIGTVNAVAS 149
Query: 85 EDMDALTFGTNILLRQ 100
EDMD L FG +LLRQ
Sbjct: 150 EDMDTLAFGGTVLLRQ 165
>gi|156937484|ref|YP_001435280.1| flap endonuclease-1 [Ignicoccus hospitalis KIN4/I]
gi|166973698|sp|A8AAC1.1|FEN_IGNH4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156566468|gb|ABU81873.1| flap endonuclease 1 [Ignicoccus hospitalis KIN4/I]
Length = 350
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E K+ + +++ V+E K LL MG+P+++ AP E EAQ
Sbjct: 116 GDVEEARKYAQMSAKLTKEMVEEAKRLLEAMGVPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M G V+A+A++D D+L FG+ L+R
Sbjct: 161 AAYMAAKGDVWASASQDYDSLLFGSPRLVRN 191
>gi|294867245|ref|XP_002765023.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239864903|gb|EEQ97740.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 407
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K R RV+ + K+LL++MG IE AP EAEA
Sbjct: 122 GDDEGIRKAAHRSTRVTPQMNADVKKLLTMMGCCIIE---------------APEEAEAT 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+V+ GK Y T+DMD LTFG+ + ++
Sbjct: 167 CAALVRYGKCYGAVTDDMDVLTFGSPVQVKN 197
>gi|62203342|gb|AAH92837.1| Zgc:110269 [Danio rerio]
gi|182888906|gb|AAI64364.1| Zgc:110269 protein [Danio rerio]
Length = 333
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
S +EC LL LMG+P I+ AP EAEA CA + K G V A A+
Sbjct: 88 TGSAFNQECLRLLHLMGVPCIK---------------APGEAEALCAHLAKIGTVNAVAS 132
Query: 85 EDMDALTFGTNILLRQ 100
EDMD L FG +LLRQ
Sbjct: 133 EDMDTLAFGGTVLLRQ 148
>gi|240103256|ref|YP_002959565.1| flap endonuclease-1 [Thermococcus gammatolerans EJ3]
gi|259645974|sp|C5A639.1|FEN_THEGJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|239910810|gb|ACS33701.1| Flap structure-specific endonuclease (fen) [Thermococcus
gammatolerans EJ3]
Length = 339
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ R +++ +++ K+LL LMG+P ++ AP E
Sbjct: 109 LERGEIEEAKKYAMRATKLNETLIEDAKKLLGLMGVPVVQ---------------APSEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M +VYA+A++D D+L FG L+R
Sbjct: 154 EAQAAYMAAKKRVYASASQDYDSLLFGAPRLVRN 187
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + + +RR V+V+ H K+ + LL ++GIPYI +A EAEAQ
Sbjct: 119 GNLERAKQLSRRTVKVTQQHCKQAERLLDVLGIPYI---------------IAAGEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
C AM K A+ D+D L FG+ L+R
Sbjct: 164 CVAMAKERLCEGVASSDLDVLAFGSPCLIR 193
>gi|347522663|ref|YP_004780233.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
gi|343459545|gb|AEM37981.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
Length = 350
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ + R++ VKE K LL MG+P+++ AP + EAQ
Sbjct: 115 GDLEAARRYAQMASRLTEDMVKEAKRLLDAMGVPWVQ---------------APADGEAQ 159
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M + G V+A A++D DAL FG L+R
Sbjct: 160 AAYMARKGDVWAAASQDYDALLFGAPRLVR 189
>gi|391332092|ref|XP_003740472.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Metaseiulus occidentalis]
Length = 957
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
EI++ R+ +++ ++C+ELL + GIP V AP EAEAQCAA+
Sbjct: 674 EINRIQRQTSEITASMAEDCEELLKMFGIPV---------------VRAPREAEAQCAAL 718
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQQLS 103
+AG V T+D D FG N++ + S
Sbjct: 719 EQAGLVQGVVTDDSDIFLFGGNVVYKNLFS 748
>gi|294893362|ref|XP_002774434.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239879827|gb|EER06250.1| flap exonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 407
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K R RV+ + K+LL++MG IE AP EAEA
Sbjct: 122 GDDEGIRKAAHRSTRVTLQMNADVKKLLTMMGCCIIE---------------APEEAEAT 166
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CAA+V+ GK Y T+DMD LTFG+ + ++
Sbjct: 167 CAALVRYGKCYGAVTDDMDVLTFGSPVQIKN 197
>gi|126460720|ref|YP_001056998.1| flap endonuclease-1 [Pyrobaculum calidifontis JCM 11548]
gi|166973705|sp|A3MY15.1|FEN_PYRCJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126250441|gb|ABO09532.1| flap endonuclease 1 [Pyrobaculum calidifontis JCM 11548]
Length = 346
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++ K+ +R + ++S V++ K+LL+ MGIP+++ AP E EAQ
Sbjct: 116 GRREDVAKYAKRAIFLTSEMVEDAKKLLTYMGIPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K G +A ++D D+L FG+ L+R
Sbjct: 161 AAHMAKRGHCWAVGSQDYDSLLFGSPRLVR 190
>gi|15897130|ref|NP_341735.1| flap endonuclease-1 [Sulfolobus solfataricus P2]
gi|284174372|ref|ZP_06388341.1| flap endonuclease-1 [Sulfolobus solfataricus 98/2]
gi|25310048|pir||F90158 DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [imported] -
Sulfolobus solfataricus
gi|13813313|gb|AAK40525.1| DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [Sulfolobus
solfataricus P2]
Length = 302
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K+LL MGIP ++ AP E EA+
Sbjct: 65 GKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + K G +A A++D DA+ FG L+R
Sbjct: 110 AAYLNKLGLSWAAASQDYDAILFGAKRLVRN 140
>gi|403222552|dbj|BAM40684.1| 5'-3' exonuclease [Theileria orientalis strain Shintoku]
Length = 824
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + I K R V+V+ K+LL LMG+P IE AP EAEAQ
Sbjct: 120 GDKESIKKLMGRTVKVTKEMNDSAKKLLRLMGVPVIE---------------APEEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA +V+ A+ED D L FG LLR
Sbjct: 165 CAYLVRNSLCRFVASEDTDTLAFGGGYLLRN 195
>gi|296412156|ref|XP_002835792.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629585|emb|CAZ79949.1| unnamed protein product [Tuber melanosporum]
Length = 914
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V+EC++LL+L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 551 VTQAMVQECQQLLTLFGIPYIT---------------APMEAEAQCAELVRLGLVDGIVT 595
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 596 DDSDTFLFGGTRVYKNMFNQAKF-VECY 622
>gi|323454359|gb|EGB10229.1| hypothetical protein AURANDRAFT_53007 [Aureococcus anophagefferens]
Length = 538
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K RV+ H + K LL LMG+P +E AP EAEA C A
Sbjct: 126 EEVYKAASASTRVTRQHNDDVKRLLRLMGVPVVE---------------APGEAEASCVA 170
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+V+ G TEDMDALTFG +++
Sbjct: 171 LVRHGACDFVVTEDMDALTFGAAKMVK 197
>gi|119872195|ref|YP_930202.1| flap endonuclease-1 [Pyrobaculum islandicum DSM 4184]
gi|166973706|sp|A1RSC7.1|FEN_PYRIL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119673603|gb|ABL87859.1| flap endonuclease 1 [Pyrobaculum islandicum DSM 4184]
Length = 346
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +++ K+ +R V ++S V++ K+LL+ MG+P+++ AP E EAQ
Sbjct: 116 GRKEDVAKYMKRAVFLTSDMVEDAKKLLTYMGVPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M K G +A ++D D+L FG+ L+R
Sbjct: 161 AAHMAKRGHCWAVGSQDYDSLLFGSPRLVRN 191
>gi|297619418|ref|YP_003707523.1| flap structure-specific endonuclease [Methanococcus voltae A3]
gi|297378395|gb|ADI36550.1| flap structure-specific endonuclease [Methanococcus voltae A3]
Length = 327
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +++ KF +R+ + + V CK LL LMG+P++ + E EAQC
Sbjct: 113 DTEKMQKFAKRMNYLDTNMVLNCKRLLDLMGVPHL---------------TSGSEGEAQC 157
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
A +VK G +A ++D D+L +G + ++R S ++
Sbjct: 158 AEIVKKGDAFAVVSQDYDSLLYGADRVIRNITSSSS 193
>gi|395646325|ref|ZP_10434185.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
gi|395443065|gb|EJG07822.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
Length = 333
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E K R R+ + K LL LMGIP++ +AP E EAQ
Sbjct: 113 GDIEEAYKQARASTRIDDAMIASSKRLLDLMGIPWM---------------VAPSEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G V A A++D DAL FG L+R
Sbjct: 158 AAFMARQGDVGAAASQDYDALLFGAPRLVRN 188
>gi|320101275|ref|YP_004176867.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
gi|319753627|gb|ADV65385.1| flap endonuclease 1 [Desulfurococcus mucosus DSM 2162]
Length = 356
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ R++ V++ K LL MGIP+++ AP E EAQ
Sbjct: 116 GDLESARRYAMMSARLTDEMVRDAKALLDAMGIPWVQ---------------APAEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M + G YA+A++D D+L FG+ L+R
Sbjct: 161 AAYMARKGDAYASASQDYDSLLFGSPRLVR 190
>gi|146302997|ref|YP_001190313.1| flap endonuclease-1 [Metallosphaera sedula DSM 5348]
gi|145701247|gb|ABP94389.1| flap endonuclease 1 [Metallosphaera sedula DSM 5348]
Length = 300
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+G +E+ K+++ R+++ KE KELL MG+P ++ AP E EA
Sbjct: 64 SGKVEEMRKYSQMTSRLTTDMAKESKELLEYMGVPTVQ---------------APSEGEA 108
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
+ A + G YA+A++D D+L FG L+R
Sbjct: 109 EAAYLNAKGITYASASQDYDSLLFGAEKLIR 139
>gi|336477791|ref|YP_004616932.1| flap structure-specific endonuclease [Methanosalsum zhilinae DSM
4017]
gi|335931172|gb|AEH61713.1| flap structure-specific endonuclease [Methanosalsum zhilinae DSM
4017]
Length = 337
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K+ + V++ S ++ K LLS+MGIP ++ APCE EAQ A
Sbjct: 115 KEAYKYAQASVKLDSYVIESSKTLLSIMGIPVVQ---------------APCEGEAQAAH 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
MVK+G A++D D+L FG ++R
Sbjct: 160 MVKSGDANYVASQDYDSLLFGAPFVIRN 187
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + + +RR V+V+ H K+ + LL +GIPY V+A EAEAQ
Sbjct: 119 GNLERAKQLSRRTVKVTQQHCKQAERLLDTLGIPY---------------VVAAGEAEAQ 163
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
C AM K A+ D+D L FG+ L+R
Sbjct: 164 CVAMAKERVCEGVASSDLDVLAFGSPCLIR 193
>gi|261402763|ref|YP_003246987.1| flap endonuclease-1 [Methanocaldococcus vulcanius M7]
gi|261369756|gb|ACX72505.1| flap structure-specific endonuclease [Methanocaldococcus vulcanius
M7]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
E+ KF +R ++ V CK LL LMGIPY+ AP E EAQ +
Sbjct: 115 DEVAKFAKRASYLTPKIVDNCKYLLGLMGIPYVN---------------APSEGEAQASY 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M K G V+A ++D D+L +G ++R
Sbjct: 160 MAKKGDVWAVVSQDYDSLLYGAPRVVRN 187
>gi|374628642|ref|ZP_09701027.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
gi|373906755|gb|EHQ34859.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
Length = 333
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD Q + R RV + K LLSLMGIPY++ AP E
Sbjct: 110 LKAGDNQAAFSYARSSTRVDREIIDSSKRLLSLMGIPYLD---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A MV G V + ++D D+L FG L+R
Sbjct: 155 EAQAAFMVSEGIVDYSVSQDYDSLLFGAEKLVRN 188
>gi|15679628|ref|NP_276745.1| flap endonuclease-1 [Methanothermobacter thermautotrophicus str.
Delta H]
gi|28380011|sp|O27670.1|FEN_METTH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|2622760|gb|AAB86106.1| DNA repair protein Rad2 [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 328
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD K+ R R+SS ++ K LL L+GIPY++ AP E
Sbjct: 109 LEEGDIDRAKKYAVRSSRMSSEILESSKRLLELLGIPYVQ---------------APGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ + MVK G +A A++D D L FG ++R
Sbjct: 154 EAQASYMVKMGDAWAVASQDYDCLLFGAPRVVRN 187
>gi|255513611|gb|EET89877.1| XPG I domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 352
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E+ KF + R++ V KELL MGI YI AP E EAQ
Sbjct: 115 GQAEEVRKFAQASTRITKEIVSSAKELLGYMGIWYIN---------------APSEGEAQ 159
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M G YA A++D D L FG+ ++R
Sbjct: 160 ASYMCSKGIAYAAASQDYDTLLFGSKKVVRN 190
>gi|126179869|ref|YP_001047834.1| flap endonuclease-1 [Methanoculleus marisnigri JR1]
gi|166973702|sp|A3CWV2.1|FEN_METMJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|125862663|gb|ABN57852.1| flap endonuclease 1 [Methanoculleus marisnigri JR1]
Length = 333
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K R+ S + +ELL L+GIP+++ AP E
Sbjct: 110 LREGDMEEAYKQASASARIDSHTIASSRELLDLLGIPWVQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M + GKV ++D D+L FG+ +L+R
Sbjct: 155 EAQAAYMARQGKVTYAVSQDYDSLLFGSPVLVRN 188
>gi|320167228|gb|EFW44127.1| DNA-repair protein rad13 [Capsaspora owczarzaki ATCC 30864]
Length = 1235
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
QE++++ R + V S + + +ELL L G+PY+ AP EAEAQCAA
Sbjct: 873 QELNRYERDVASVDSEMIADTQELLRLFGMPYL---------------TAPMEAEAQCAA 917
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+ AG T TED D FG + R
Sbjct: 918 LDLAGITDGTITEDSDVFLFGARRVYR 944
>gi|390938891|ref|YP_006402629.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
gi|390191998|gb|AFL67054.1| flap endonuclease 1 [Desulfurococcus fermentans DSM 16532]
Length = 363
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + ++ +++ V++ K LL MGIP+++ AP E EA
Sbjct: 125 SGDLELARRYAMMSAKLTEEMVRDAKSLLDAMGIPWVQ---------------APAEGEA 169
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
Q A +VK G YA+A++D D+L FG+ L+R
Sbjct: 170 QAAYIVKKGDAYASASQDYDSLLFGSPKLVR 200
>gi|218884379|ref|YP_002428761.1| flap endonuclease-1 [Desulfurococcus kamchatkensis 1221n]
gi|322812496|pdb|3ORY|A Chain A, Crystal Structure Of Flap Endonuclease 1 From
Hyperthermophilic Archaeon Desulfurococcus Amylolyticus
gi|218765995|gb|ACL11394.1| Flap structure-specific endonuclease [Desulfurococcus kamchatkensis
1221n]
Length = 363
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + ++ +++ V++ K LL MGIP+++ AP E EA
Sbjct: 125 SGDLELARRYAMMSAKLTEEMVRDAKSLLDAMGIPWVQ---------------APAEGEA 169
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
Q A +VK G YA+A++D D+L FG+ L+R
Sbjct: 170 QAAYIVKKGDAYASASQDYDSLLFGSPKLVR 200
>gi|145592541|ref|YP_001154543.1| flap endonuclease-1 [Pyrobaculum arsenaticum DSM 13514]
gi|166973704|sp|A4WNC4.1|FEN_PYRAR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|145284309|gb|ABP51891.1| flap endonuclease 1 [Pyrobaculum arsenaticum DSM 13514]
Length = 346
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL + G E+ K+ +R + +++ V++ K+LL+ MG+P+++
Sbjct: 108 ELVRAIKEGRRDEVAKYAKRAIFLTNEMVEDAKKLLTYMGVPWVQ--------------- 152
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ A M + G +A ++D D+L FG+ L+R
Sbjct: 153 APSEGEAQAAYMARRGHCWAVGSQDYDSLLFGSPRLVRN 191
>gi|258577255|ref|XP_002542809.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
gi|237903075|gb|EEP77476.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
Length = 1143
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 12 AQEIDKFNRRLVR--------------VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNF 57
A+ D F+R L + VS + V EC++LL L G+PYI
Sbjct: 785 AENADAFDRELKQLRAQQKKDRRDADEVSHIMVTECQQLLKLFGLPYIT----------- 833
Query: 58 LGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
AP EAEAQCA +V G V T+D D FG + + + A F + C+
Sbjct: 834 ----APMEAEAQCAELVSLGLVDGIVTDDSDTFLFGGTRVYKNMFNQAKF-VECY 883
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L D ++ K+ R R+S ++ KELL MGIPYI+ AP E
Sbjct: 109 LKKKDLEKARKYASRASRISKEIIESSKELLDAMGIPYIQ---------------APNEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ +VK G +A A++D D L FG ++R
Sbjct: 154 EAQAVYLVKNGDAWAVASQDYDCLLFGAPRVIRN 187
>gi|327310721|ref|YP_004337618.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
gi|326947200|gb|AEA12306.1| flap endonuclease-1 [Thermoproteus uzoniensis 768-20]
Length = 346
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+++ K+ +R++ V+ ++ K LL+ MGIP+++ AP E EAQ
Sbjct: 116 GRAEDVAKYAKRVIYVTDQMAEDAKALLTAMGIPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M G V+ ++D D+L FG L+R
Sbjct: 161 AAYMAARGSVWGAGSQDYDSLLFGAPRLVR 190
>gi|18405624|ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog
gi|13649704|gb|AAK37472.1| UV hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3 [Arabidopsis thaliana]
Length = 1479
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
F+ GD Q K R VSS EC+ELL + GIPYI +AP E
Sbjct: 904 FVSLGDEQR--KLERNAESVSSEMFAECQELLQIFGIPYI---------------IAPME 946
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFG 93
AEAQCA M ++ V T+D D FG
Sbjct: 947 AEAQCAFMEQSNLVDGIVTDDSDVFLFG 974
>gi|297815070|ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321256|gb|EFH51677.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1463
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
F+ GD Q K R VSS EC+ELL + GIPYI +AP E
Sbjct: 899 FVSLGDEQR--KLERNAESVSSEMFAECQELLQIFGIPYI---------------IAPME 941
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFG 93
AEAQCA M ++ V T+D D FG
Sbjct: 942 AEAQCAFMEQSNLVDGIVTDDSDVFLFG 969
>gi|11994123|dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
F+ GD Q K R VSS EC+ELL + GIPYI +AP E
Sbjct: 944 FVSLGDEQR--KLERNAESVSSEMFAECQELLQIFGIPYI---------------IAPME 986
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFG 93
AEAQCA M ++ V T+D D FG
Sbjct: 987 AEAQCAFMEQSNLVDGIVTDDSDVFLFG 1014
>gi|379005480|ref|YP_005261152.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
gi|375160933|gb|AFA40545.1| flap structure-specific endonuclease [Pyrobaculum oguniense TE7]
Length = 346
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL + G E+ K+ +R + +++ V++ K LL+ MG+P+++
Sbjct: 108 ELVRAIKEGRRDEVAKYAKRAIFLTNEMVEDAKRLLTYMGVPWVQ--------------- 152
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ A M + G +A ++D D+L FG+ L+R
Sbjct: 153 APSEGEAQAAYMARRGHCWAVGSQDYDSLLFGSPRLVRN 191
>gi|386876195|ref|ZP_10118324.1| flap structure-specific endonuclease [Candidatus Nitrosopumilus
salaria BD31]
gi|386805976|gb|EIJ65466.1| flap structure-specific endonuclease [Candidatus Nitrosopumilus
salaria BD31]
Length = 340
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ K+ ++ + VKE KELL+ GIPYIE AP E EA
Sbjct: 112 GNMEDARKYAQQTTSMKDGMVKESKELLTYFGIPYIE---------------APSEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTQTGQAYASASQDFDSILCGAKRLIR 186
>gi|154280855|ref|XP_001541240.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
gi|150411419|gb|EDN06807.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
Length = 1111
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC+ELL L G+PYI AP EAEAQCA ++
Sbjct: 766 KAQRDADEVSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSL 810
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + A F + C+
Sbjct: 811 GLVDGVVTDDSDIFLFGGTRVYKNMFNQAKF-VECY 845
>gi|325095909|gb|EGC49219.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H88]
Length = 1159
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC+ELL L G+PYI AP EAEAQCA ++
Sbjct: 815 KARRDADEVSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSL 859
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + A F + C+
Sbjct: 860 GLVDGVVTDDSDIFLFGGTRVYKNMFNQAKF-VECY 894
>gi|240273423|gb|EER36944.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H143]
Length = 1159
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC+ELL L G+PYI AP EAEAQCA ++
Sbjct: 815 KARRDADEVSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSL 859
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + A F + C+
Sbjct: 860 GLVDGVVTDDSDIFLFGGTRVYKNMFNQAKF-VECY 894
>gi|332796311|ref|YP_004457811.1| XPG I domain-containing protein [Acidianus hospitalis W1]
gi|332694046|gb|AEE93513.1| XPG I domain protein [Acidianus hospitalis W1]
Length = 344
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E+ K+++ R+++ +E K LL MGIP ++ AP E EA+
Sbjct: 107 GETKELKKYSQMATRLTNDMAEEGKRLLEAMGIPVVQ---------------APSEGEAE 151
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G +A A++D D+L FG N L+R
Sbjct: 152 AAYLCSQGYTWAAASQDYDSLLFGANKLIR 181
>gi|154151645|ref|YP_001405263.1| flap endonuclease-1 [Methanoregula boonei 6A8]
gi|166973700|sp|A7IA59.1|FEN_METB6 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154000197|gb|ABS56620.1| XPG I [Methanoregula boonei 6A8]
Length = 333
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD +E + R RV + KELL L+GIPY++ AP E EAQ
Sbjct: 113 GDEEEAYRQARSATRVDETIIATSKELLDLLGIPYVQ---------------APSEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G ++D D L FG +L+R
Sbjct: 158 AAFMVQRGDARFAVSQDYDTLLFGAPLLMRN 188
>gi|257053576|ref|YP_003131409.1| flap endonuclease-1 [Halorhabdus utahensis DSM 12940]
gi|256692339|gb|ACV12676.1| XPG I domain protein [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA + + R R++ V ++ +ELL+L+ +P ++ AP E EAQ
Sbjct: 114 GDAVRVARLESRTQRLTDVILETTRELLALLDVPTVD---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G V TED DAL FG LRQ
Sbjct: 159 AAHMARRGDVDYVGTEDYDALLFGAPFTLRQ 189
>gi|296242726|ref|YP_003650213.1| flap endonuclease 1 [Thermosphaera aggregans DSM 11486]
gi|296095310|gb|ADG91261.1| flap endonuclease 1 [Thermosphaera aggregans DSM 11486]
Length = 353
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ +++ VKE K LL +G+P+++ AP E EAQ
Sbjct: 116 GDLEAARRYAMMASKLTDEMVKEAKRLLDALGVPWVQ---------------APAEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + K G YA+A++D D+L FG+ L+R
Sbjct: 161 AAYLAKKGDAYASASQDYDSLLFGSPRLIR 190
>gi|171186427|ref|YP_001795346.1| flap endonuclease-1 [Pyrobaculum neutrophilum V24Sta]
gi|226700955|sp|B1YC46.1|FEN_THENV RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170935639|gb|ACB40900.1| XPG I domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 349
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
E+ + G ++ K+ +R++ +++ V++ K LL+ MG+P+++
Sbjct: 108 EVVKAIREGKRDDVAKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQ--------------- 152
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ A M K G +A ++D D+L FG+ L+R
Sbjct: 153 APSEGEAQAAHMAKRGHCWAVGSQDYDSLLFGSPRLVRN 191
>gi|70991587|ref|XP_750642.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
gi|66848275|gb|EAL88604.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
Length = 1130
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V + EC++LLSL G+PYI +AP EAEAQCA +V
Sbjct: 787 KDRRDADEVTQVMITECQQLLSLFGLPYI---------------IAPMEAEAQCAELVSL 831
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 832 GLVDGIITDDSDIFLFGGTRVYKNMFNQGKF-VECY 866
>gi|254168936|ref|ZP_04875776.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|197622200|gb|EDY34775.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
Length = 339
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 15/71 (21%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
V E K+LL MGIP+++ AP E EAQ A M K G YA+A++D D+
Sbjct: 132 VDEAKKLLDYMGIPWVQ---------------APSEGEAQAAYMAKKGDTYASASQDFDS 176
Query: 90 LTFGTNILLRQ 100
L FG L+R
Sbjct: 177 LLFGAPNLVRN 187
>gi|389642679|ref|XP_003718972.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|351641525|gb|EHA49388.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|440472732|gb|ELQ41574.1| DNA-repair protein rad13 [Magnaporthe oryzae Y34]
gi|440485125|gb|ELQ65111.1| DNA-repair protein rad13 [Magnaporthe oryzae P131]
Length = 1269
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V V EC++LL L GIPY V AP EAEAQCA +V+ G V T
Sbjct: 909 VSQVMVTECQQLLRLFGIPY---------------VTAPMEAEAQCAELVRLGLVDGIVT 953
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 954 DDSDTFLFG 962
>gi|254166886|ref|ZP_04873740.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289596167|ref|YP_003482863.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
gi|197624496|gb|EDY37057.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289533954|gb|ADD08301.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
Length = 339
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 15/71 (21%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
V E K+LL MGIP+++ AP E EAQ A M K G YA+A++D D+
Sbjct: 132 VDEAKKLLDYMGIPWVQ---------------APSEGEAQAAYMAKKGDTYASASQDFDS 176
Query: 90 LTFGTNILLRQ 100
L FG L+R
Sbjct: 177 LLFGAPNLVRN 187
>gi|119178413|ref|XP_001240880.1| hypothetical protein CIMG_08043 [Coccidioides immitis RS]
gi|392867161|gb|EAS29637.2| DNA excision repair protein (rad2) [Coccidioides immitis RS]
Length = 1142
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 811 VSQIMVAECQQLLKLFGLPY---------------VTAPMEAEAQCAELVSLGLVDGIVT 855
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 856 DDSDIFLFGGTRIYKNMFNQAKF-VECY 882
>gi|320033898|gb|EFW15844.1| DNA excision repair protein [Coccidioides posadasii str. Silveira]
Length = 1143
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 812 VSQIMVAECQQLLKLFGLPY---------------VTAPMEAEAQCAELVSLGLVDGIVT 856
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 857 DDSDIFLFGGTRIYKNMFNQAKF-VECY 883
>gi|303310363|ref|XP_003065194.1| XPG N-terminal domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240104854|gb|EER23049.1| XPG N-terminal domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 1143
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 812 VSQIMVAECQQLLKLFGLPY---------------VTAPMEAEAQCAELVSLGLVDGIVT 856
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 857 DDSDIFLFGGTRIYKNMFNQAKF-VECY 883
>gi|225682262|gb|EEH20546.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb03]
Length = 1233
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC+ELL L G+PYI AP EAEAQCA +V
Sbjct: 890 KDRRDADEVSHIMVSECQELLRLFGLPYI---------------TAPMEAEAQCAELVSL 934
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 935 GLVDGVVTDDSDIFLFGGTRVYKNMFNQVKF-VECY 969
>gi|378725893|gb|EHY52352.1| DNA excision repair protein ERCC-5 [Exophiala dermatitidis
NIH/UT8656]
Length = 1319
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V V+EC+ LL L G+PYI AP EAEAQCA +V+ G V T
Sbjct: 985 VTQVMVQECQALLRLFGLPYIT---------------APMEAEAQCAELVRLGLVDGIVT 1029
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1030 DDSDIFLFGGTRIYKNMFNAAKF-VECY 1056
>gi|225558184|gb|EEH06469.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus G186AR]
Length = 1159
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + + EC+ELL L G+PYI AP EAEAQCA ++
Sbjct: 815 KARRDADEVSHIMISECQELLRLFGLPYIT---------------APMEAEAQCAELLSL 859
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + A F + C+
Sbjct: 860 GLVDGVVTDDSDIFLFGGTRVYKNMFNQAKF-VECY 894
>gi|449298336|gb|EMC94351.1| hypothetical protein BAUCODRAFT_73871 [Baudoinia compniacensis UAMH
10762]
Length = 1348
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + V EC++LL L G+PY V AP EAEAQCA +V+ G V T
Sbjct: 975 VTHIMVTECQQLLRLFGLPY---------------VTAPMEAEAQCAELVRLGLVDGIVT 1019
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1020 DDSDCFLFGGTRIYKNMFNQAKF-VECY 1046
>gi|448634703|ref|ZP_21675101.1| flap endonuclease-1 [Haloarcula vallismortis ATCC 29715]
gi|445749676|gb|EMA01121.1| flap endonuclease-1 [Haloarcula vallismortis ATCC 29715]
Length = 326
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 26/115 (22%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS---------WATFSMH--CWE 113
+ M + G V TED DAL FG + LRQ S AT S H WE
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQITSKGDPELMDFEATLSQHDLTWE 213
>gi|402083876|gb|EJT78894.1| DNA-repair protein rad13 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1287
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V V EC++LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 889 VSQVMVAECQQLLRLFGIPYIT---------------APMEAEAQCAELVQLGLVDGIVT 933
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 934 DDSDTFLFG 942
>gi|238593673|ref|XP_002393263.1| hypothetical protein MPER_07036 [Moniliophthora perniciosa FA553]
gi|215460482|gb|EEB94193.1| hypothetical protein MPER_07036 [Moniliophthora perniciosa FA553]
Length = 95
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP EAEAQCA + + GKVYA +EDMD LTF IL R
Sbjct: 1 APSEAEAQCAELARGGKVYAAGSEDMDTLTFNAPILFRH 39
>gi|448499403|ref|ZP_21611330.1| flap endonuclease-1 [Halorubrum coriense DSM 10284]
gi|445697358|gb|ELZ49423.1| flap endonuclease-1 [Halorubrum coriense DSM 10284]
Length = 325
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLELLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M AG V +ED D L FG LRQ S
Sbjct: 159 CAQMAAAGTVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|400603046|gb|EJP70644.1| DNA excision repair protein [Beauveria bassiana ARSEF 2860]
Length = 1154
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 855 KDRRDADEVTQVMVSECQSLLRLFGIPYI---------------TAPMEAEAQCAELVRL 899
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 900 GMVDGIVTDDSDTFLFGGTRVYKNMFNSNKF-VECY 934
>gi|148642785|ref|YP_001273298.1| flap endonuclease-1 [Methanobrevibacter smithii ATCC 35061]
gi|166973703|sp|A5UL52.1|FEN_METS3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148551802|gb|ABQ86930.1| DNA repair flap structure-specific 5'-3' endonuclease
[Methanobrevibacter smithii ATCC 35061]
Length = 327
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L D QE K+ R ++S ++ K+LL++MGIPYIE A E
Sbjct: 109 LAKQDTQEARKYAMRSSKLSPYIIESSKKLLTMMGIPYIE---------------AYGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A +V+ G +A A++D D L FG ++R
Sbjct: 154 EAQAAYLVENGDAWAVASQDYDCLLFGAKRVVRN 187
>gi|261349732|ref|ZP_05975149.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
gi|288861687|gb|EFC93985.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
Length = 327
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L D QE K+ R ++S ++ K+LL++MGIPYIE A E
Sbjct: 109 LAKQDTQEARKYAMRSSKLSPYIIESSKKLLTMMGIPYIE---------------AYGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A +V+ G +A A++D D L FG ++R
Sbjct: 154 EAQAAYLVENGDAWAVASQDYDCLLFGAKRVVRN 187
>gi|346321714|gb|EGX91313.1| DNA excision repair protein Rad2 [Cordyceps militaris CM01]
Length = 1162
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 859 KDRRDADEVTQVMVSECQSLLRLFGIPYI---------------TAPMEAEAQCAELVRL 903
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 904 GMVDGIVTDDSDTFLFGGTRVYKNMFNSNKF-VECY 938
>gi|290559766|gb|EFD93090.1| XPG I domain protein [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 332
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 18 FNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAG 77
+ RRL R+ V KELL MG+ Y++ AP E EAQ A M G
Sbjct: 117 YMRRLSRIDDYIVASSKELLDYMGVKYVQ---------------APAEGEAQAAWMSGKG 161
Query: 78 KVYATATEDMDALTFGTNILLRQ 100
VYA A++D D + FG ++R
Sbjct: 162 LVYAAASQDYDTILFGAKRVIRN 184
>gi|124028216|ref|YP_001013536.1| flap endonuclease-1 [Hyperthermus butylicus DSM 5456]
gi|166973697|sp|A2BMI0.1|FEN_HYPBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|123978910|gb|ABM81191.1| Endonuclease [Hyperthermus butylicus DSM 5456]
Length = 350
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + ++ + R++ V++ K+LL MG+P+++ AP E EAQ
Sbjct: 115 GDTKAARRYAQMAARLTDEMVEDAKKLLDAMGVPWVQ---------------APAEGEAQ 159
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M + G +A A++D D+L FG+ L+R
Sbjct: 160 AAFMARRGDAWAAASQDYDSLLFGSPRLVR 189
>gi|226289636|gb|EEH45120.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb18]
Length = 1178
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ELL L G+PYI AP EAEAQCA +V G V T
Sbjct: 843 VSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGVVT 887
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 888 DDSDIFLFGGTRVYKNMFNQVKF-VECY 914
>gi|295662156|ref|XP_002791632.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279758|gb|EEH35324.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1178
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ELL L G+PYI AP EAEAQCA +V G V T
Sbjct: 843 VSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGVVT 887
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 888 DDSDIFLFGGTRVYKNMFNQVKF-VECY 914
>gi|422295551|gb|EKU22850.1| flap endonuclease-1 [Nannochloropsis gaditana CCMP526]
Length = 193
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 15/66 (22%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
+ +E D+ ++RLVR +CK+LL LMG+P++E APCEAEAQC
Sbjct: 124 NVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLE---------------APCEAEAQC 168
Query: 71 AAMVKA 76
AA+ KA
Sbjct: 169 AALAKA 174
>gi|219850742|ref|YP_002465174.1| flap endonuclease-1 [Methanosphaerula palustris E1-9c]
gi|254788674|sp|B8GIA0.1|FEN_METPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|219545001|gb|ACL15451.1| XPG I domain protein [Methanosphaerula palustris E1-9c]
Length = 333
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K R RV+ + KELL+LMG+P ++ AP E
Sbjct: 110 LARGDQEEAYKQARASSRVTPEIIATSKELLTLMGVPCVQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A+M +G V ++D D+L FG +L+R
Sbjct: 155 EAQAASMAASGAVTYAVSQDYDSLLFGAPLLVR 187
>gi|322712027|gb|EFZ03600.1| XPG domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 1191
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V V EC+ LL L GIPYI AP EAEAQCA +VK G V T
Sbjct: 873 VTQVMVTECQALLRLFGIPYIT---------------APMEAEAQCAELVKLGIVDGIVT 917
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 918 DDSDTFLFG 926
>gi|398403715|ref|XP_003853324.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici IPO323]
gi|339473206|gb|EGP88300.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici IPO323]
Length = 1324
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + + EC+ LL L G+PYI AP EAEAQCA +VK G V T
Sbjct: 970 VTHIMITECQALLRLFGLPYIT---------------APMEAEAQCAELVKLGLVDGIVT 1014
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1015 DDSDCFLFGGTRIYKNMFNQAKF-VECY 1041
>gi|352681676|ref|YP_004892200.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
gi|350274475|emb|CCC81120.1| flap-structure endonuclease [Thermoproteus tenax Kra 1]
Length = 346
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+ +R+V ++ ++ K LL+ MGIP+++ AP E EAQ
Sbjct: 116 GKTEEVAKYAKRVVYITDSMAEDAKALLTAMGIPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M G + ++D D+L FG L+R
Sbjct: 161 AAHMAAKGSAWGAGSQDYDSLLFGAPRLVR 190
>gi|242800576|ref|XP_002483617.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC
10500]
gi|218716962|gb|EED16383.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC
10500]
Length = 1128
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 823 VSQIMVSECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIVT 867
Query: 85 EDMDALTFGTNILLRQQLSWATF 107
+D D FG + + + + F
Sbjct: 868 DDSDTFLFGGTRVYKNMFNQSKF 890
>gi|159124202|gb|EDP49320.1| DNA excision repair protein Rad2 [Aspergillus fumigatus A1163]
Length = 1130
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V + EC++LLSL G+PYI AP EAEAQCA +V
Sbjct: 787 KDRRDADEVTQVMITECQQLLSLFGLPYI---------------TAPMEAEAQCAELVSL 831
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 832 GLVDGIITDDSDIFLFGGTRVYKNMFNQGKF-VECY 866
>gi|367019746|ref|XP_003659158.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
gi|347006425|gb|AEO53913.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
Length = 1244
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V V EC+ LL+L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 869 VTQVMVTECQALLTLFGIPYIT---------------APMEAEAQCAELVRLGLVDGIVT 913
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 914 DDSDTFLFG 922
>gi|322369323|ref|ZP_08043888.1| flap endonuclease-1 [Haladaptatus paucihalophilus DX253]
gi|320551055|gb|EFW92704.1| flap endonuclease-1 [Haladaptatus paucihalophilus DX253]
Length = 326
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E+ + + R++ V + +ELL L+ +P IE AP E EAQ
Sbjct: 114 GDAIEVARLDAHTQRLTPVIQETTRELLDLLDVPVIE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G V TED DAL G + LRQ
Sbjct: 159 AAHMARTGAVDYAGTEDYDALLLGAPLTLRQ 189
>gi|448343822|ref|ZP_21532739.1| flap endonuclease-1 [Natrinema gari JCM 14663]
gi|445621905|gb|ELY75370.1| flap endonuclease-1 [Natrinema gari JCM 14663]
Length = 325
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG+ + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGSPLTLRQ 188
>gi|397774993|ref|YP_006542539.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
gi|397684086|gb|AFO58463.1| flap structure-specific endonuclease [Natrinema sp. J7-2]
Length = 325
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG+ + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGSPLTLRQ 188
>gi|71031676|ref|XP_765480.1| flap endonuclease 1 [Theileria parva strain Muguga]
gi|122052062|sp|Q4N3S6.1|FEN1_THEPA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|68352436|gb|EAN33197.1| flap endonuclease 1, putative [Theileria parva]
Length = 494
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + K R V+VS + K+LL LMG+P IE A EAEAQ
Sbjct: 120 GDKESVKKLVGRTVKVSKEMNESAKKLLRLMGVPVIE---------------ALEEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA +V A+ED D L FG LLR S
Sbjct: 165 CAYLVTKNLCRFVASEDTDTLVFGGAFLLRNVAS 198
>gi|432328461|ref|YP_007246605.1| flap structure-specific endonuclease [Aciduliprofundum sp.
MAR08-339]
gi|432135170|gb|AGB04439.1| flap structure-specific endonuclease [Aciduliprofundum sp.
MAR08-339]
Length = 339
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 15/71 (21%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
V E K+LL MG+P+++ AP E EAQ A M + G YA+A++D D+
Sbjct: 132 VDEAKKLLDHMGVPWVQ---------------APSEGEAQAAFMAQRGDAYASASQDFDS 176
Query: 90 LTFGTNILLRQ 100
L FGT L+R
Sbjct: 177 LLFGTPRLVRN 187
>gi|345571348|gb|EGX54162.1| hypothetical protein AOL_s00004g195 [Arthrobotrys oligospora ATCC
24927]
Length = 1248
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D Q+ D+ R V+ + + EC++LL + GIPYI AP EAEAQC
Sbjct: 854 DQQKKDR--RDADEVTKIMITECQQLLQMFGIPYIT---------------APMEAEAQC 896
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
A +V G V T+D D FG + + + A + + C+
Sbjct: 897 AELVNLGLVDGIVTDDSDIFLFGGTRVYKNMFNQAKY-VECY 937
>gi|193084162|gb|ACF09827.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote AD1000-207-H3]
Length = 341
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + K+ ++ + V++ K LL L GIPYI+ A + EA
Sbjct: 111 SGDFESARKYAQQTTSMQETMVEDSKHLLDLFGIPYIQ---------------AKADGEA 155
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K GK YA A++D D++ FG L+R
Sbjct: 156 TAAHMNKTGKAYAVASQDYDSILFGATKLVR 186
>gi|212540874|ref|XP_002150592.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
gi|210067891|gb|EEA21983.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
Length = 1127
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
+S + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 822 ISQIMVSECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIVT 866
Query: 85 EDMDALTFGTNILLRQQLSWATF 107
+D D FG + + + + F
Sbjct: 867 DDSDTFLFGGTRIYKNMFNQSKF 889
>gi|255943339|ref|XP_002562438.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587171|emb|CAP94835.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1083
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+++ + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 761 VTTIMINECQQLLTLFGLPYIT---------------APMEAEAQCAKLVSLGLVDGIVT 805
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 806 DDSDIFLFGGTRVYKNMFNQSKF-VECY 832
>gi|48477300|ref|YP_023006.1| flap endonuclease-1 [Picrophilus torridus DSM 9790]
gi|73919351|sp|Q6L2I9.1|FEN_PICTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|48429948|gb|AAT42813.1| RAD-2/FEN-1 exonuclease [Picrophilus torridus DSM 9790]
Length = 338
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
M+L + + D +I + R+ ++ V E K LL+LMG+PY++
Sbjct: 103 MKLEEAIASNDDAKIRSLSSRINYITDDIVNESKTLLNLMGLPYVQ-------------- 148
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ + M G V A ++D D L FG +LR
Sbjct: 149 -APSEGEAQASYMTLKGDVNAVVSQDYDCLLFGAKRILRN 187
>gi|340624624|ref|YP_004743077.1| flap endonuclease-1 [Methanococcus maripaludis X1]
gi|339904892|gb|AEK20334.1| flap endonuclease-1 [Methanococcus maripaludis X1]
Length = 324
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R + V K+LL LMGIPY+ AP E EAQCA
Sbjct: 115 EEMQKYAKRANFLDRKTVDNSKKLLELMGIPYVN---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKA + ++D D++ +G + +++
Sbjct: 160 LVKANNAFCVISQDYDSILYGADYVVKN 187
>gi|452824082|gb|EME31087.1| DNA excision repair protein ERCC-5 [Galdieria sulphuraria]
Length = 928
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 28/99 (28%)
Query: 13 QEIDKFNRRLVRVSSVHVK------------ECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
QE +K RR +R H+K E +ELL ++GIPYI+
Sbjct: 587 QEFEK-ERRELRQEFTHLKSGSDIITDEMCEEIRELLRMLGIPYIQ-------------- 631
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
AP EAEAQCA + G V TED DA FG + R
Sbjct: 632 -APMEAEAQCAYFSQVGLVEGVVTEDSDAFLFGAKTVFR 669
>gi|427797693|gb|JAA64298.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 856
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
QE + R ++ V VKEC+ELL+L+G PY V++P EAEAQCA
Sbjct: 570 QEAARQQRHAASLNDVLVKECQELLALLGQPY---------------VVSPGEAEAQCAW 614
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ + G T+D DA FG + R
Sbjct: 615 LEQHGLSQGVVTDDSDAWLFGAQCIYRH 642
>gi|115390695|ref|XP_001212852.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
gi|114193776|gb|EAU35476.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
Length = 1131
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 822 VSQIMISECQQLLTLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 866
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 867 DDSDIFLFGGTRVYKNMFNQSKF-VECY 893
>gi|425769594|gb|EKV08085.1| DNA excision repair protein Rad2 [Penicillium digitatum Pd1]
gi|425771041|gb|EKV09495.1| DNA excision repair protein Rad2 [Penicillium digitatum PHI26]
Length = 1130
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+++ + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 808 VTTIMINECQQLLALFGLPYIT---------------APMEAEAQCAKLVSLGLVDGIVT 852
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 853 DDSDIFLFGGTRVYKNMFNQSKF-VECY 879
>gi|407464594|ref|YP_006775476.1| flap endonuclease-1 [Candidatus Nitrosopumilus sp. AR2]
gi|407047782|gb|AFS82534.1| flap endonuclease-1 [Candidatus Nitrosopumilus sp. AR2]
Length = 340
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ KF ++ + VKE K+ L+ +GIPYIE AP E EA
Sbjct: 112 GNMEDARKFAQQTTSMKDGMVKESKQFLTYLGIPYIE---------------APSEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDYDSILCGAKRLVR 186
>gi|302507858|ref|XP_003015890.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
gi|291179458|gb|EFE35245.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
Length = 1120
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC++LL L G+PYI AP EAEAQCA +V
Sbjct: 779 KDRRDADEVSQIMVTECQQLLRLFGLPYI---------------TAPMEAEAQCAELVAL 823
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + + + + C+
Sbjct: 824 GLVDGIVTDDSDTFLFGGTRIYKNMFNQSKY-VECY 858
>gi|83766314|dbj|BAE56457.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1066
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + + EC++LL+L G+PYI AP EAEAQCA +V
Sbjct: 794 KDRRDADEVSQIMISECQQLLTLFGLPYI---------------TAPMEAEAQCAELVAL 838
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 839 GLVDGIITDDSDIFLFGGTRVYKNMFNQGKF-VECY 873
>gi|119468577|ref|XP_001257869.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
gi|119406021|gb|EAW15972.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
Length = 1132
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC++LLSL G+PYI AP EAEAQCA +V G V T
Sbjct: 797 VTQVMITECQQLLSLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 841
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 842 DDSDIFLFGGTRVYKNMFNQGKF-VECY 868
>gi|126465621|ref|YP_001040730.1| flap endonuclease-1 [Staphylothermus marinus F1]
gi|166973707|sp|A3DMG2.1|FEN_STAMF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|126014444|gb|ABN69822.1| flap endonuclease 1 [Staphylothermus marinus F1]
Length = 350
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD + ++ +++ V++ K+LL MGIP+I+ AP E
Sbjct: 113 LRKGDIEAARRYAMMSAKLTDEMVQDAKKLLDAMGIPWIQ---------------APAEG 157
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A +V G +A+A++D D+L FG+ L+R
Sbjct: 158 EAQAAYIVSKGDAWASASQDYDSLLFGSPRLIR 190
>gi|82617225|emb|CAI64131.1| DNA repair protein [uncultured archaeon]
gi|268322957|emb|CBH36545.1| flap structure-specific endonuclease [uncultured archaeon]
Length = 330
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + R+ + V + K LL+LMGIPY++ AP E EAQ A MV+
Sbjct: 118 KYAQASARIDATIVADAKTLLTLMGIPYVQ---------------APSEGEAQAAYMVQN 162
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G +++D D+L FG I +R
Sbjct: 163 GDAELVSSQDYDSLLFGAPITIRN 186
>gi|350632743|gb|EHA21110.1| hypothetical protein ASPNIDRAFT_45646 [Aspergillus niger ATCC 1015]
Length = 1130
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V + EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 795 VSQVMITECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 839
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 840 DDSDVFLFGGTRVYKNMFNQSKF-VECY 866
>gi|317028500|ref|XP_001390185.2| single-stranded DNA endonuclease [Aspergillus niger CBS 513.88]
Length = 1100
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V + EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 765 VSQVMITECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 809
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 810 DDSDVFLFGGTRVYKNMFNQSKF-VECY 836
>gi|134057863|emb|CAK38230.1| unnamed protein product [Aspergillus niger]
Length = 916
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V + EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 581 VSQVMITECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 625
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 626 DDSDVFLFGGTRVYKNMFNQSKF-VECY 652
>gi|327298531|ref|XP_003233959.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
gi|326464137|gb|EGD89590.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
Length = 1121
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R VS + V EC++LL L G+PYI AP EAEAQCA +V
Sbjct: 780 KDRRDADEVSQIMVTECQQLLRLFGLPYI---------------TAPMEAEAQCAELVTL 824
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + + + + C+
Sbjct: 825 GLVDGIVTDDSDTFLFGGTRIYKNMFNQSKY-VECY 859
>gi|448651213|ref|ZP_21680282.1| flap endonuclease-1 [Haloarcula californiae ATCC 33799]
gi|445770740|gb|EMA21798.1| flap endonuclease-1 [Haloarcula californiae ATCC 33799]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|407928397|gb|EKG21254.1| Xeroderma pigmentosum group G protein [Macrophomina phaseolina MS6]
Length = 1302
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC++LLSL G+PYI AP EAEAQCA +V G V T
Sbjct: 920 VTQTMIAECQQLLSLFGLPYIT---------------APMEAEAQCAELVDLGLVDGIVT 964
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 965 DDSDIFLFGGTRVYKNMFNQAKF-VECY 991
>gi|448678733|ref|ZP_21689740.1| flap endonuclease-1 [Haloarcula argentinensis DSM 12282]
gi|445772720|gb|EMA23765.1| flap endonuclease-1 [Haloarcula argentinensis DSM 12282]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|55376971|ref|YP_134821.1| flap endonuclease-1 [Haloarcula marismortui ATCC 43049]
gi|74520713|sp|Q5V5T7.1|FEN_HALMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55229696|gb|AAV45115.1| DNA repair protein Rad2 [Haloarcula marismortui ATCC 43049]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|448689147|ref|ZP_21694884.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
gi|445779017|gb|EMA29959.1| flap endonuclease-1 [Haloarcula japonica DSM 6131]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|448640877|ref|ZP_21677664.1| flap endonuclease-1 [Haloarcula sinaiiensis ATCC 33800]
gi|445761402|gb|EMA12650.1| flap endonuclease-1 [Haloarcula sinaiiensis ATCC 33800]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|344211083|ref|YP_004795403.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
gi|343782438|gb|AEM56415.1| flap endonuclease-1 [Haloarcula hispanica ATCC 33960]
Length = 326
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTDTIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|161528211|ref|YP_001582037.1| flap endonuclease-1 [Nitrosopumilus maritimus SCM1]
gi|226700954|sp|A9A4B0.1|FEN_NITMS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|160339512|gb|ABX12599.1| XPG I domain protein [Nitrosopumilus maritimus SCM1]
Length = 340
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ K+ ++ + VKE K+LL+ GIPYIE AP E EA
Sbjct: 112 GNMEDARKYAQQTTSMKDGMVKESKQLLTYFGIPYIE---------------APSEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDFDSILCGAKRLVR 186
>gi|358375820|dbj|GAA92396.1| DNA excision repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 1135
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS V + EC++LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 797 VSQVMITECQQLLRLFGLPY---------------VTAPMEAEAQCAELVSLGLVDGIIT 841
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + F + C+
Sbjct: 842 DDSDVFLFGGTRVYKNMFNQSKF-VECY 868
>gi|193084327|gb|ACF09984.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote SAT1000-49-D2]
Length = 341
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + K+ ++ + V++ K LL L GIPYI+ A + EA
Sbjct: 111 SGDFESARKYAQQTTSMQDTMVEDSKHLLDLFGIPYIQ---------------ANADGEA 155
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K GK YA A++D D++ FG L+R
Sbjct: 156 TAAHMNKTGKAYAVASQDYDSILFGAKKLVR 186
>gi|284162570|ref|YP_003401193.1| XPG I domain-containing protein [Archaeoglobus profundus DSM 5631]
gi|284012567|gb|ADB58520.1| XPG I domain protein [Archaeoglobus profundus DSM 5631]
Length = 335
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E K+ ++ VRV ++ K+LL+LMGIP ++ AP E EAQ
Sbjct: 110 DIAEARKYAQQAVRVDEYIIESSKKLLNLMGIPIVQ---------------APSEGEAQA 154
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +V+ G T ++D D+L FG+ L R
Sbjct: 155 AYIVRKGDADYTGSQDYDSLLFGSPRLARN 184
>gi|451997573|gb|EMD90038.1| hypothetical protein COCHEDRAFT_1106592 [Cochliobolus heterostrophus
C5]
Length = 1297
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 937 VTQTMISECQQLLTLFGLPYIT---------------APMEAEAQCAELVNLGLVDGIVT 981
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 982 DDSDTFLFGGTRVYKNMFNAAKF-VECY 1008
>gi|288559640|ref|YP_003423126.1| flap endonuclease Fen [Methanobrevibacter ruminantium M1]
gi|288542350|gb|ADC46234.1| flap endonuclease Fen [Methanobrevibacter ruminantium M1]
Length = 328
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +E K+ R R+S ++ K+LL MGIPY++ A E EAQ
Sbjct: 112 GNIEEARKYAIRSSRLSPYIIESSKKLLEYMGIPYVQ---------------AKGEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +A A++D D L FG ++R
Sbjct: 157 GAYMVKNGDAWAVASQDYDCLLFGAPRIIRN 187
>gi|189202272|ref|XP_001937472.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984571|gb|EDU50059.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1222
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 935 VTQTMIAECQQLLTLFGLPYIT---------------APMEAEAQCAELVNLGLVDGIVT 979
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 980 DDSDTFLFGGTRVYKNMFNAAKF-VECY 1006
>gi|41614884|ref|NP_963382.1| flap endonuclease-1 [Nanoarchaeum equitans Kin4-M]
gi|48427872|sp|P61942.1|FEN_NANEQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40068608|gb|AAR38943.1| NEQ088 [Nanoarchaeum equitans Kin4-M]
Length = 339
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ QE K+ + L ++ S V+E K+LL MGIPY++ AP E
Sbjct: 110 LKKGNIQEAIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EA+ A + K G ++D D+L FG+ ++R
Sbjct: 155 EAEAAYLTKKGVSDYCGSQDYDSLLFGSPRVVRN 188
>gi|452847295|gb|EME49227.1| hypothetical protein DOTSEDRAFT_68105 [Dothistroma septosporum NZE10]
Length = 1395
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + ++EC+ LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 1019 VTQIMIQECQALLRLFGLPYIT---------------APMEAEAQCAELVHLGLVDGIVT 1063
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1064 DDSDCFLFGGTRIYKNMFNQAKF-VECY 1090
>gi|448667547|ref|ZP_21686047.1| flap endonuclease-1 [Haloarcula amylolytica JCM 13557]
gi|445770115|gb|EMA21183.1| flap endonuclease-1 [Haloarcula amylolytica JCM 13557]
Length = 326
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ + K + R R++ V ++LL L+ +P ++ AP E E Q
Sbjct: 114 GDSTRVAKLDSRTQRLTETIVDTTRDLLELLDVPIVD---------------APAEGEGQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G V TED DAL FG + LRQ
Sbjct: 159 ASVMARRGDVDYVGTEDYDALLFGAPMTLRQ 189
>gi|390365680|ref|XP_003730870.1| PREDICTED: uncharacterized protein LOC100889325 [Strongylocentrotus
purpuratus]
Length = 1543
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 16/83 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KEC+ELL LMG+P I+ + EAEA CAA+ AG V TED DA
Sbjct: 142 LKECQELLELMGVPCIQ---------------SKGEAEAMCAALNSAGIVDGCMTEDGDA 186
Query: 90 LTFGTNILLRQQLSWATFSMHCW 112
+G I+ R L+ AT + C+
Sbjct: 187 FLYGARIVYR-NLNMATGKVDCY 208
>gi|433592003|ref|YP_007281499.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|448334339|ref|ZP_21523517.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
gi|433306783|gb|AGB32595.1| flap structure-specific endonuclease [Natrinema pellirubrum DSM
15624]
gi|445620225|gb|ELY73731.1| flap endonuclease-1 [Natrinema pellirubrum DSM 15624]
Length = 325
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG + LRQ
Sbjct: 158 AAHMVKHGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|304313993|ref|YP_003849140.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
gi|302587452|gb|ADL57827.1| flap structure-specific endonuclease [Methanothermobacter
marburgensis str. Marburg]
Length = 328
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD + K+ R R+S V+ K LL L+GIPY++ AP E
Sbjct: 109 LEEGDIERARKYAVRSSRMSQDIVESSKRLLELLGIPYVQ---------------APGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ + +V+ G +A A++D D L FG ++R
Sbjct: 154 EAQASFIVRRGDAWAVASQDYDCLLFGAPRVVRN 187
>gi|329764928|ref|ZP_08256517.1| flap endonuclease-1 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138597|gb|EGG42844.1| flap endonuclease-1 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 339
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ KF ++ + VKE K++L+ GIPYI+ AP E EA
Sbjct: 112 GNMEDARKFAQQTTSMKDGMVKESKQILTYFGIPYID---------------APSEGEAM 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDFDSILCGAKRLIR 186
>gi|391869945|gb|EIT79134.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1066
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 802 VSQIMISECQQLLTLFGLPYIT---------------APMEAEAQCAELVALGLVDGIIT 846
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 847 DDSDIFLFGGTRVYKNMFNQGKF-VECY 873
>gi|317140876|ref|XP_001818459.2| single-stranded DNA endonuclease [Aspergillus oryzae RIB40]
Length = 1135
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 802 VSQIMISECQQLLTLFGLPYIT---------------APMEAEAQCAELVALGLVDGIIT 846
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 847 DDSDIFLFGGTRVYKNMFNQGKF-VECY 873
>gi|238484915|ref|XP_002373696.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
gi|220701746|gb|EED58084.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
Length = 1135
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 802 VSQIMISECQQLLTLFGLPYIT---------------APMEAEAQCAELVALGLVDGIIT 846
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 847 DDSDIFLFGGTRVYKNMFNQGKF-VECY 873
>gi|451852103|gb|EMD65398.1| hypothetical protein COCSADRAFT_114116, partial [Cochliobolus sativus
ND90Pr]
Length = 1213
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC++LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 938 VTQTMISECQQLLALFGLPYIT---------------APMEAEAQCAELVNLGLVDGIVT 982
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 983 DDSDTFLFGGTRVYKNMFNAAKF-VECY 1009
>gi|448382773|ref|ZP_21562268.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
gi|445661242|gb|ELZ14033.1| flap endonuclease-1 [Haloterrigena thermotolerans DSM 11522]
Length = 325
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|327350765|gb|EGE79622.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ATCC
18188]
Length = 1166
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ELL L G+PYI AP EAEAQCA ++ G V T
Sbjct: 834 VSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSLGLVDGVVT 878
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 879 DDSDIFLFGGTRVYKNMFNTVKF-VECY 905
>gi|239609845|gb|EEQ86832.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ER-3]
Length = 1166
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ELL L G+PYI AP EAEAQCA ++ G V T
Sbjct: 834 VSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSLGLVDGVVT 878
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 879 DDSDIFLFGGTRVYKNMFNTVKF-VECY 905
>gi|261198979|ref|XP_002625891.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis
SLH14081]
gi|239595043|gb|EEQ77624.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis
SLH14081]
Length = 1128
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ELL L G+PYI AP EAEAQCA ++ G V T
Sbjct: 796 VSHIMVSECQELLRLFGLPYIT---------------APMEAEAQCAELLSLGLVDGVVT 840
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + F + C+
Sbjct: 841 DDSDIFLFGGTRVYKNMFNTVKF-VECY 867
>gi|393795424|ref|ZP_10378788.1| flap endonuclease-1 [Candidatus Nitrosoarchaeum limnia BG20]
Length = 339
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ KF ++ + VKE K++L+ GIPYI+ AP E EA
Sbjct: 112 GNMEDARKFAQQTTSMKDGMVKESKQILTYFGIPYID---------------APSEGEAM 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDFDSILCGAKRLIR 186
>gi|374723540|gb|EHR75620.1| flap endonuclease-1 [uncultured marine group II euryarchaeote]
Length = 342
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD K +R++ S V E K+LL L+G+P+++ A E
Sbjct: 113 LAAGDFPLAQKMAQRIMHYSPEMVAETKQLLDLLGVPWVD---------------AKAEG 157
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
E Q A M G++ AT+D DAL +GT +L+R +S +
Sbjct: 158 EGQAAVMAAKGQLDVVATQDWDALLYGTPLLVRNLMSHGS 197
>gi|257077017|ref|ZP_05571378.1| flap endonuclease-1 [Ferroplasma acidarmanus fer1]
Length = 339
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Query: 2 ELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVL 61
EL L + DA++I + R+ +++ V E K+LL +MG+P+++
Sbjct: 104 ELNLAMENKDAEKIKTLSSRINYITADIVSESKKLLDMMGVPWVQ--------------- 148
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP E EAQ + M K G V + ++D D L G +LR
Sbjct: 149 APSEGEAQASYMSKVGAVDSVISQDYDCLLLGARRVLRN 187
>gi|326482848|gb|EGE06858.1| DNA-repair protein rad13 [Trichophyton equinum CBS 127.97]
Length = 1119
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 786 VSQIMVTECQQLLRLFGLPYIT---------------APMEAEAQCAELVTLGLVDGIVT 830
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + + + C+
Sbjct: 831 DDSDTFLFGGTRIYKNMFNQSKY-VECY 857
>gi|326474654|gb|EGD98663.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818]
Length = 1119
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 786 VSQIMVTECQQLLRLFGLPYIT---------------APMEAEAQCAELVTLGLVDGIVT 830
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + + + C+
Sbjct: 831 DDSDTFLFGGTRIYKNMFNQSKY-VECY 857
>gi|315041705|ref|XP_003170229.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
gi|311345263|gb|EFR04466.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
Length = 1126
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 788 VSQIMVTECQQLLRLFGLPYIT---------------APMEAEAQCAELVALGLVDGIVT 832
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + + + C+
Sbjct: 833 DDSDTFLFGGTRIYKNMFNQSKY-VECY 859
>gi|330917946|ref|XP_003298025.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
gi|311328997|gb|EFQ93872.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
Length = 1293
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC++LL+L G+PY V AP EAEAQCA +V G V T
Sbjct: 937 VTQTMIAECQQLLTLFGLPY---------------VTAPMEAEAQCAELVNLGLVDGIVT 981
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 982 DDSDTFLFGGTRVYKNMFNAAKF-VECY 1008
>gi|159040632|ref|YP_001539884.1| flap endonuclease-1 [Caldivirga maquilingensis IC-167]
gi|189044441|sp|A8M9L3.1|FEN_CALMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157919467|gb|ABW00894.1| XPG I [Caldivirga maquilingensis IC-167]
Length = 350
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G E K+ +R + ++S V E K LL MG+P+++ AP E EAQ
Sbjct: 116 GKKSEARKYAQRALFITSDMVDEAKRLLDSMGVPWVQ---------------APSEGEAQ 160
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M G V+A ++D D+ FG L+R
Sbjct: 161 AAYMASKGIVWAAGSQDYDSFLFGAPRLVR 190
>gi|310790037|gb|EFQ25570.1| DNA excision repair protein [Glomerella graminicola M1.001]
Length = 1271
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V V EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 931 VTQVMVTECQALLRLFGIPYIT---------------APMEAEAQCAELVQLGLVDGIVT 975
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 976 DDSDCFLFG 984
>gi|296818415|ref|XP_002849544.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
gi|238839997|gb|EEQ29659.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
Length = 1066
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 693 VSHIMVTECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIVT 737
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + + + C+
Sbjct: 738 DDSDTFLFGGTRIYKNMFNQSKY-VECY 764
>gi|159905743|ref|YP_001549405.1| flap endonuclease-1 [Methanococcus maripaludis C6]
gi|159887236|gb|ABX02173.1| XPG I domain protein [Methanococcus maripaludis C6]
Length = 324
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R + + K+LL LMGIPYI+ AP E EAQCA
Sbjct: 115 EEMQKYAKRANFLDKKIIDNSKKLLELMGIPYID---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKA + ++D D++ +G +++
Sbjct: 160 LVKANDAFCVISQDYDSILYGAENVVKN 187
>gi|429329613|gb|AFZ81372.1| DNA-repair protein xp-G, putative [Babesia equi]
Length = 839
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 34 KELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+++L L GIPYI +AP EAE+QCA + ++G YA T+D DAL FG
Sbjct: 535 QKMLKLFGIPYI---------------VAPSEAESQCAHLNESGACYAVITDDSDALVFG 579
Query: 94 TNILLRQQLSWATFSMHCWE 113
N +L+ + F ++ E
Sbjct: 580 ANRVLKNFYNSNIFEVYTSE 599
>gi|403223884|dbj|BAM42014.1| uncharacterized protein TOT_040000390 [Theileria orientalis strain
Shintoku]
Length = 784
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 26 SSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATE 85
+ ++ + + LL L G+PY+ +AP EAE+QCA M K G YA ++
Sbjct: 474 NKMYYDDTQALLELFGVPYL---------------IAPSEAESQCAYMNKKGDCYAVISD 518
Query: 86 DMDALTFGTNILLRQQLSWATFSMHCWE 113
D DAL FG LL+ + F ++ E
Sbjct: 519 DSDALVFGARCLLKNFYNDNVFELYTAE 546
>gi|302665120|ref|XP_003024173.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
gi|291188218|gb|EFE43562.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
Length = 1120
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 787 VSQIMVTECQQLLRLFGLPYIT---------------APMEAEAQCAELVALGLVDGIVT 831
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + + + + C+
Sbjct: 832 DDSDTFLFGGTRIYKNMFNQSKY-VECY 858
>gi|448504703|ref|ZP_21614044.1| flap endonuclease-1 [Halorubrum distributum JCM 9100]
gi|448519062|ref|ZP_21617838.1| flap endonuclease-1 [Halorubrum distributum JCM 10118]
gi|445701913|gb|ELZ53885.1| flap endonuclease-1 [Halorubrum distributum JCM 9100]
gi|445704078|gb|ELZ55996.1| flap endonuclease-1 [Halorubrum distributum JCM 10118]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLELLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGAVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|342878276|gb|EGU79631.1| hypothetical protein FOXB_09914 [Fusarium oxysporum Fo5176]
Length = 1260
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V + EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 895 KDRRDADEVTQVMITECQALLRLFGIPYI---------------TAPMEAEAQCAELVRL 939
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 940 GLVDGIVTDDSDTFLFGGTRVYKNMFNSNKF-VECY 974
>gi|322694710|gb|EFY86532.1| DNA excision repair protein Rad2 [Metarhizium acridum CQMa 102]
Length = 1168
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 872 VTQVMITECQALLRLFGIPYIT---------------APMEAEAQCAELVRLGIVDGIVT 916
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 917 DDSDTFLFG 925
>gi|304372804|ref|YP_003858300.1| flap endonuclease-1 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K LL MGIP ++ AP E EA+
Sbjct: 114 GKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQ---------------APSEGEAE 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G +A A++D D++ FG L+R
Sbjct: 159 AAYLNILGFSWAAASQDYDSILFGAKRLVR 188
>gi|448425472|ref|ZP_21582802.1| flap endonuclease-1 [Halorubrum terrestre JCM 10247]
gi|448485392|ref|ZP_21606617.1| flap endonuclease-1 [Halorubrum arcis JCM 13916]
gi|445680543|gb|ELZ32986.1| flap endonuclease-1 [Halorubrum terrestre JCM 10247]
gi|445818046|gb|EMA67913.1| flap endonuclease-1 [Halorubrum arcis JCM 13916]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLELLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGAVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|448337894|ref|ZP_21526967.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
gi|445624854|gb|ELY78227.1| flap endonuclease-1 [Natrinema pallidum DSM 3751]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + ++LL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRDLLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG+ + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGSPLTLRQ 188
>gi|448327893|ref|ZP_21517213.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
gi|445617013|gb|ELY70619.1| flap endonuclease-1 [Natrinema versiforme JCM 10478]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDSVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG+ + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGSPLTLRQ 188
>gi|448453282|ref|ZP_21593725.1| flap endonuclease-1 [Halorubrum litoreum JCM 13561]
gi|445807602|gb|EMA57685.1| flap endonuclease-1 [Halorubrum litoreum JCM 13561]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLELLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGAVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|374636521|ref|ZP_09708087.1| flap structure-specific endonuclease [Methanotorris formicicus
Mc-S-70]
gi|373558724|gb|EHP85052.1| flap structure-specific endonuclease [Methanotorris formicicus
Mc-S-70]
Length = 326
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R+ ++ V+ K+LL LMGIPY+ AP E E Q +
Sbjct: 115 EEMQKYAKRMNFLTKDIVENSKKLLDLMGIPYVN---------------APAEGEGQASY 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M K G V+ ++D DAL +G ++R
Sbjct: 160 MAKKGDVFCVVSQDYDALLYGAPRVVRN 187
>gi|335433586|ref|ZP_08558406.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
gi|334898592|gb|EGM36696.1| flap endonuclease-1 [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA ++ + R R++ V ++ ++LL L+ +P ++ AP E EAQ
Sbjct: 114 GDAIQVARLESRTQRLTDVIIETTRKLLGLLDVPIVD---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G TED DAL FG LRQ
Sbjct: 159 AAYMARRGDADYVGTEDYDALLFGAPYTLRQ 189
>gi|45358876|ref|NP_988433.1| flap endonuclease-1 [Methanococcus maripaludis S2]
gi|45047742|emb|CAF30869.1| flap endonuclease [Methanococcus maripaludis S2]
Length = 324
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R + V K+LL LMGIPY+ AP E EAQCA
Sbjct: 115 EEMQKYAKRANFLDKKTVDNSKKLLELMGIPYVN---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VKA + ++D D++ +G +++
Sbjct: 160 LVKANNAFCVISQDYDSILYGAENVVKN 187
>gi|448496208|ref|ZP_21610310.1| flap endonuclease-1 [Halorubrum californiensis DSM 19288]
gi|445687084|gb|ELZ39377.1| flap endonuclease-1 [Halorubrum californiensis DSM 19288]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLELLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGTVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|448466285|ref|ZP_21599082.1| flap endonuclease-1 [Halorubrum kocurii JCM 14978]
gi|445814415|gb|EMA64379.1| flap endonuclease-1 [Halorubrum kocurii JCM 14978]
Length = 325
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDAIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGSVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|448431107|ref|ZP_21584935.1| flap endonuclease-1 [Halorubrum tebenquichense DSM 14210]
gi|445688254|gb|ELZ40519.1| flap endonuclease-1 [Halorubrum tebenquichense DSM 14210]
Length = 325
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G +ED DAL FG LRQ S
Sbjct: 159 CAHMAATGTADHAGSEDYDALLFGAPTTLRQLTS 192
>gi|347833577|emb|CCD49274.1| similar to DNA excision repair protein [Botryotinia fuckeliana]
Length = 1341
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 929 VSHIMITECQALLRLFGIPYIT---------------APMEAEAQCAELVRLGLVDGIVT 973
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 974 DDSDIFLFG 982
>gi|448534324|ref|ZP_21621652.1| flap endonuclease-1 [Halorubrum hochstenium ATCC 700873]
gi|445704806|gb|ELZ56713.1| flap endonuclease-1 [Halorubrum hochstenium ATCC 700873]
Length = 325
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGTVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|448439982|ref|ZP_21588230.1| flap endonuclease-1 [Halorubrum saccharovorum DSM 1137]
gi|445690499|gb|ELZ42709.1| flap endonuclease-1 [Halorubrum saccharovorum DSM 1137]
Length = 325
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGTVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|448454659|ref|ZP_21594212.1| flap endonuclease-1 [Halorubrum lipolyticum DSM 21995]
gi|445814746|gb|EMA64705.1| flap endonuclease-1 [Halorubrum lipolyticum DSM 21995]
Length = 325
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDAIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGSVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|407462243|ref|YP_006773560.1| flap endonuclease-1 [Candidatus Nitrosopumilus koreensis AR1]
gi|407045865|gb|AFS80618.1| flap endonuclease-1 [Candidatus Nitrosopumilus koreensis AR1]
Length = 340
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ K+ ++ + VKE K LL+ GIPYIE AP E EA
Sbjct: 112 GNMEDARKYAQQTTSMKDGMVKESKHLLACFGIPYIE---------------APSEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDFDSILCGAKRLVR 186
>gi|193084394|gb|ACF10047.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote SAT1000-21-C11]
Length = 341
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + K+ ++ + V++ K L L GIPYI+ A + EA
Sbjct: 111 SGDFESARKYAQQTTSMQDTMVEDSKHFLDLFGIPYIQ---------------AKADGEA 155
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K GK YA A++D D++ FG L+R
Sbjct: 156 TAAHMNKTGKAYAVASQDYDSILFGATKLVR 186
>gi|448474374|ref|ZP_21602233.1| flap endonuclease-1 [Halorubrum aidingense JCM 13560]
gi|445817681|gb|EMA67550.1| flap endonuclease-1 [Halorubrum aidingense JCM 13560]
Length = 325
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIHETTRELLELLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGAVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|302927330|ref|XP_003054474.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
gi|256735415|gb|EEU48761.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
Length = 1192
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 863 VTQVMITECQALLRLFGIPYIT---------------APMEAEAQCAELVQLGLVDGIVT 907
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 908 DDSDTFLFG 916
>gi|396470540|ref|XP_003838668.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
gi|312215236|emb|CBX95189.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
Length = 1312
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC+ LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 968 VTQTMITECQHLLTLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIVT 1012
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1013 DDSDTFLFGGTRVYKNMFNAAKF-VECY 1039
>gi|345005776|ref|YP_004808629.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
gi|344321402|gb|AEN06256.1| Flap structure-specific endonuclease [halophilic archaeon DL31]
Length = 326
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ E + R R++ + + LL + +PYIE AP E EAQ
Sbjct: 114 GDSVEAARLEARTQRLTDTIHETTRGLLDRLDVPYIE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
CA M G+V +ED D +TFG LRQ
Sbjct: 159 CAHMAATGEVDYAGSEDYDTMTFGAPRTLRQ 189
>gi|222480031|ref|YP_002566268.1| flap endonuclease-1 [Halorubrum lacusprofundi ATCC 49239]
gi|222452933|gb|ACM57198.1| XPG I domain protein [Halorubrum lacusprofundi ATCC 49239]
Length = 325
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIQETTRELLRLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
CA M G V +ED D L FG LRQ S
Sbjct: 159 CAHMAATGTVDHAGSEDYDTLLFGAPTTLRQLTS 192
>gi|225452522|ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
Length = 1513
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD Q K R VSS EC+ELL + G+PYI +AP EAEAQ
Sbjct: 821 GDEQR--KLERNADCVSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQ 863
Query: 70 CAAMVKAGKVYATATEDMDALTFG 93
CA M A V T+D D FG
Sbjct: 864 CAYMELANLVDGVVTDDSDVFLFG 887
>gi|429853644|gb|ELA28704.1| DNA excision repair protein rad2 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1240
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V V EC+ LL L GIPYI AP EAEAQCA +V G V T
Sbjct: 903 VTQVMVTECQALLRLFGIPYIT---------------APMEAEAQCAELVHLGLVDGIVT 947
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 948 DDSDTFLFG 956
>gi|84994172|ref|XP_951808.1| 5'-3' exonuclease [Theileria annulata strain Ankara]
gi|74952859|sp|Q4UFP0.1|FEN1_THEAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|65301969|emb|CAI74076.1| 5'-3' exonuclease, putative [Theileria annulata]
Length = 506
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + K R V+V+ K+LL LMGIP IE A EAEAQ
Sbjct: 120 GDKESAKKLVGRTVKVTKDMNDSAKKLLRLMGIPVIE---------------ALEEAEAQ 164
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWA 105
CA +V + A+ED D L FG LLR S A
Sbjct: 165 CAYLVTKNLCHFVASEDTDTLVFGGWFLLRNVTSSA 200
>gi|448310824|ref|ZP_21500603.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
gi|445607172|gb|ELY61065.1| flap endonuclease-1 [Natronolimnobius innermongolicus JCM 12255]
Length = 325
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG + LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|346973852|gb|EGY17304.1| DNA-repair protein rad13 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 875 KDRRDADEVTQVMVGECQALLRLFGIPYI---------------TAPMEAEAQCAELVRL 919
Query: 77 GKVYATATEDMDALTFG 93
G V T+D D FG
Sbjct: 920 GLVDGIVTDDSDTFLFG 936
>gi|302415937|ref|XP_003005800.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
gi|261355216|gb|EEY17644.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
Length = 1209
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 861 KDRRDADEVTQVMVGECQALLRLFGIPYI---------------TAPMEAEAQCAELVRL 905
Query: 77 GKVYATATEDMDALTFG 93
G V T+D D FG
Sbjct: 906 GLVDGIVTDDSDTFLFG 922
>gi|397780742|ref|YP_006545215.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
gi|396939244|emb|CCJ36499.1| flap endonuclease-1 [Methanoculleus bourgensis MS2]
Length = 333
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD +E K R+ ++ ELL L+GIP ++ AP E
Sbjct: 110 LKEGDMEEAYKQASASTRIDRHIIESSHELLDLLGIPVVQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A MV++G V ++D D+L FG+ +L+R
Sbjct: 155 EAQAAHMVRSGGVTYAVSQDYDSLLFGSPVLVRN 188
>gi|302348204|ref|YP_003815842.1| flap endonuclease-1 [Acidilobus saccharovorans 345-15]
gi|302328616|gb|ADL18811.1| flap endonuclease-1 [Acidilobus saccharovorans 345-15]
Length = 350
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+G +E K+ + +SS V E K LL MGIP+++ AP + EA
Sbjct: 114 SGSIEEARKYAQATSELSSDMVSEAKRLLDYMGIPWVQ---------------APADGEA 158
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
Q A + + G +A ++D D+L FG L+R
Sbjct: 159 QAAHLAQKGDAWAAGSQDYDSLLFGAPRLVR 189
>gi|448344743|ref|ZP_21533645.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
gi|445636849|gb|ELY90006.1| flap endonuclease-1 [Natrinema altunense JCM 12890]
Length = 325
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA I + R R++ + ++LL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAIAQLESRTQRLTPTIQETSRDLLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG + LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|346430351|emb|CCC55608.1| flap endonuclease-1 [uncultured archaeon]
Length = 343
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + + KF R + + V++ K LL LMG+P++E AP E EAQ
Sbjct: 115 GNEELMRKFATRAAFLKNYMVEDSKTLLDLMGVPWVE---------------APSEGEAQ 159
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M G + + ++D D+L FG+ L+R
Sbjct: 160 AAYMAARGVTWGSVSQDYDSLLFGSPRLVR 189
>gi|424811751|ref|ZP_18236997.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757159|gb|EGQ40741.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
Length = 340
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E + RV+ + E +ELL MG+PY++ AP E EAQ
Sbjct: 112 GDVDEAFSKAMQSSRVTGDMIDESRELLDAMGVPYVD---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
A M G VY ++D D+L FG +++ S
Sbjct: 157 AARMAANGNVYGVGSQDWDSLLFGAERMVKNLTS 190
>gi|453088882|gb|EMF16922.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 1387
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ ++EC+ LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 1032 VTQTMIQECQALLRLFGLPY---------------VTAPMEAEAQCAELVHLGLVDGIVT 1076
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 1077 DDSDCFLFGGTRIYKNMFNQAKF-VECY 1103
>gi|453086627|gb|EMF14669.1| hypothetical protein SEPMUDRAFT_63272 [Mycosphaerella populorum
SO2202]
Length = 788
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 19/100 (19%)
Query: 5 LFLLTGDAQEIDKFNRRL----VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
LF+ G + K N+R+ VRV+SV KELL G P+
Sbjct: 75 LFVFDGPNKPTFKRNKRVGGPGVRVASVPEFLAKELLRKFGFPWH--------------- 119
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+AP EAEA+CA + + G V A +ED+D L FG+ +L R
Sbjct: 120 VAPGEAEAECALLQREGVVDAVLSEDVDTLMFGSGVLWRN 159
>gi|336463192|gb|EGO51432.1| hypothetical protein NEUTE1DRAFT_70166 [Neurospora tetrasperma FGSC
2508]
gi|350297610|gb|EGZ78587.1| PIN domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 1269
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ + + EC+ LL GIPYI AP EAEAQCA +V+
Sbjct: 871 KDRRDADEVTQIMITECQALLRFFGIPYI---------------TAPMEAEAQCAELVRL 915
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 916 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKF-VECY 950
>gi|336265442|ref|XP_003347492.1| Rad2 protein [Sordaria macrospora k-hell]
gi|380087974|emb|CCC05192.1| putative Rad2 protein [Sordaria macrospora k-hell]
Length = 1279
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ + + EC+ LL GIPYI AP EAEAQCA +V+
Sbjct: 876 KDRRDADEVTQIMITECQALLRFFGIPYI---------------TAPMEAEAQCAELVRL 920
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 921 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKF-VECY 955
>gi|85116383|ref|XP_965045.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
gi|28926846|gb|EAA35809.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
Length = 1269
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ + + EC+ LL GIPYI AP EAEAQCA +V+
Sbjct: 868 KDRRDADEVTQIMITECQALLRFFGIPYI---------------TAPMEAEAQCAELVRL 912
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 913 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKF-VECY 947
>gi|359417810|ref|ZP_09209878.1| flap endonuclease-1, partial [Candidatus Haloredivivus sp. G17]
gi|358031834|gb|EHK00670.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 296
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++E KELL MGIPYI+ S E EAQ A M G VYA ++D D
Sbjct: 89 IEESKELLDAMGIPYIQAS---------------SEGEAQAAFMSSEGDVYAVGSQDWDC 133
Query: 90 LTFGTNILLRQQLSWAT 106
+ FG + ++R S T
Sbjct: 134 MLFGADRMVRNLTSRKT 150
>gi|196004776|ref|XP_002112255.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
gi|190586154|gb|EDV26222.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
Length = 247
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
QE + R VS+ EC+ELLSL GIPYI ++P EAEAQCA
Sbjct: 107 QEHKRQERMAASVSNEMYSECQELLSLFGIPYI---------------VSPMEAEAQCAV 151
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
+ + T T+D D FG + R
Sbjct: 152 LDFTNQTDGTITDDSDIFLFGGRNIYR 178
>gi|315426143|dbj|BAJ47788.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
gi|343485003|dbj|BAJ50657.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
Length = 344
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD + ++ +R + V+ +LL MG+PY V+AP E
Sbjct: 112 LAEGDLEAARRYAQRAASLEKYMVESAADLLKAMGVPY---------------VMAPSEG 156
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A M G VYA ++DMD+L FG+ L+R
Sbjct: 157 EAQAAYMAAKGSVYAAGSQDMDSLLFGSPRLVR 189
>gi|300711017|ref|YP_003736831.1| flap endonuclease-1 [Halalkalicoccus jeotgali B3]
gi|448296888|ref|ZP_21486938.1| flap endonuclease-1 [Halalkalicoccus jeotgali B3]
gi|299124700|gb|ADJ15039.1| flap endonuclease-1 [Halalkalicoccus jeotgali B3]
gi|445580565|gb|ELY34943.1| flap endonuclease-1 [Halalkalicoccus jeotgali B3]
Length = 325
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDRVEAARLEARTQRLTDTIQRTTRELLELLDVPIVE---------------APTEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
A M K+ V TED DAL FG + LRQ S
Sbjct: 159 AAHMAKSADVDYAGTEDYDALLFGAPLTLRQLTS 192
>gi|47227957|emb|CAF97586.1| unnamed protein product [Tetraodon nigroviridis]
Length = 176
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AP +AEA CA +VK G V A A+EDMD L FG NIL+RQ
Sbjct: 1 APADAEALCAWLVKEGTVDAVASEDMDTLPFGANILIRQ 39
>gi|358387657|gb|EHK25251.1| hypothetical protein TRIVIDRAFT_208179 [Trichoderma virens Gv29-8]
Length = 1196
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 895 VTQTMITECQALLRLFGIPYIT---------------APMEAEAQCAELVRLGMVDGIVT 939
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 940 DDSDTFLFG 948
>gi|452987544|gb|EME87299.1| hypothetical protein MYCFIDRAFT_147956 [Pseudocercospora fijiensis
CIRAD86]
Length = 1298
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ ++EC+ LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 934 VTQTMIQECQALLRLFGLPYIT---------------APMEAEAQCAELVHLGLVDGIVT 978
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 979 DDSDCFLFGGTRVYKNMFNQAKF-VECY 1005
>gi|340517177|gb|EGR47422.1| predicted protein [Trichoderma reesei QM6a]
Length = 1166
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC+ LL L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 863 VTQTMIAECQALLRLFGIPYIT---------------APMEAEAQCAELVRLGMVDGIVT 907
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 908 DDSDTFLFG 916
>gi|169596320|ref|XP_001791584.1| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
gi|160701280|gb|EAT92412.2| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
Length = 1279
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC+ LL+L G+PYI AP EAEAQCA +V G V T
Sbjct: 921 VTQSMITECQHLLTLFGLPYIT---------------APMEAEAQCAELVHLGLVDGIVT 965
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCW 112
+D D FG + + + A F + C+
Sbjct: 966 DDSDTFLFGGTRVYKNMFNAAKF-VECY 992
>gi|150402483|ref|YP_001329777.1| flap endonuclease-1 [Methanococcus maripaludis C7]
gi|150033513|gb|ABR65626.1| XPG I [Methanococcus maripaludis C7]
Length = 324
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R + + K+LL LMGIPYI AP E EAQCA
Sbjct: 115 EEMQKYAKRANFLDKKTIDNSKKLLELMGIPYIN---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VK+ + ++D D++ +G +++
Sbjct: 160 LVKSNDAFCVISQDYDSILYGAENVVKN 187
>gi|134045325|ref|YP_001096811.1| flap endonuclease-1 [Methanococcus maripaludis C5]
gi|132662950|gb|ABO34596.1| flap endonuclease 1 [Methanococcus maripaludis C5]
Length = 324
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ K+ +R + + K+LL LMGIPYI AP E EAQCA
Sbjct: 115 EEMQKYAKRANFLDKKTIDNSKKLLELMGIPYIN---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VK+ + ++D D++ +G +++
Sbjct: 160 LVKSNDAFCVISQDYDSILYGAENVVKN 187
>gi|408388533|gb|EKJ68217.1| hypothetical protein FPSE_11684 [Fusarium pseudograminearum CS3096]
Length = 1224
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC+ LL L GIPY V AP EAEAQCA +V G V T
Sbjct: 894 VTQVMITECQALLRLFGIPY---------------VTAPMEAEAQCAELVNLGLVDGIVT 938
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 939 DDSDTFLFG 947
>gi|340923811|gb|EGS18714.1| putative DNA repair protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1238
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 16/78 (20%)
Query: 17 KFNRRLV-RVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVK 75
K +RR V+ V + EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 867 KRDRRDADEVTQVMISECQTLLQLFGIPYI---------------TAPMEAEAQCAELVR 911
Query: 76 AGKVYATATEDMDALTFG 93
G V T+D D FG
Sbjct: 912 LGLVDGIVTDDSDTFLFG 929
>gi|399576495|ref|ZP_10770250.1| flap endonuclease-1 [Halogranum salarium B-1]
gi|399237939|gb|EJN58868.1| flap endonuclease-1 [Halogranum salarium B-1]
Length = 326
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R+++V + ++ L L+ +PYIE AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTAVIHETTRDFLDLLDVPYIE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARRGDADYVGSEDYDTLLFGAPFTLRQ 189
>gi|385773896|ref|YP_005646463.1| XPG I domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|323478011|gb|ADX83249.1| XPG I domain protein [Sulfolobus islandicus HVE10/4]
Length = 302
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K LL MGIP ++ AP E EA+
Sbjct: 65 GKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + G +A A++D D++ FG L+R
Sbjct: 110 AAYLNIIGFSWAAASQDYDSILFGAKRLVRN 140
>gi|156045904|ref|XP_001589507.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980]
gi|154693624|gb|EDN93362.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1188
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + + EC+ LL L GIPYI AP EAEAQCA +V G V T
Sbjct: 884 VSHIMITECQALLRLFGIPYIT---------------APMEAEAQCAELVHLGLVDGIVT 928
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 929 DDSDIFLFG 937
>gi|19112887|ref|NP_596095.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe 972h-]
gi|13432230|sp|P28706.2|RAD13_SCHPO RecName: Full=DNA repair protein rad13
gi|3130034|emb|CAA19011.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe]
Length = 1112
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V +KEC+ELL L G+PYI +AP EAEAQC+ +++ V T
Sbjct: 752 VTQVMIKECQELLRLFGLPYI---------------VAPQEAEAQCSKLLELKLVDGIVT 796
Query: 85 EDMDALTFGTNILLRQQLSWATF 107
+D D FG + R + F
Sbjct: 797 DDSDVFLFGGTRVYRNMFNQNKF 819
>gi|5020|emb|CAA47291.1| excision repair protein [Schizosaccharomyces pombe]
Length = 1113
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V +KEC+ELL L G+PYI +AP EAEAQC+ +++ V T
Sbjct: 753 VTQVMIKECQELLRLFGLPYI---------------VAPQEAEAQCSKLLELKLVDGIVT 797
Query: 85 EDMDALTFGTNILLRQQLSWATF 107
+D D FG + R + F
Sbjct: 798 DDSDVFLFGGTRVYRNMFNQNKF 820
>gi|328715848|ref|XP_001946726.2| PREDICTED: hypothetical protein LOC100169397 [Acyrthosiphon pisum]
Length = 951
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K +R V+ E K LL L GIPYI AP EAEAQCA + K
Sbjct: 651 KSDRMASSVTQKITSEIKGLLKLFGIPYIT---------------APMEAEAQCAFLEKI 695
Query: 77 GKVYATATEDMDALTFGTNILLR 99
G+ T T+D D FG N++ +
Sbjct: 696 GRTEGTVTDDSDVWLFGANVVYK 718
>gi|359415965|ref|ZP_09208345.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
gi|358033683|gb|EHK02208.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 251
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++E KELL MGIPYI+ S E EAQ A M G VYA ++D D
Sbjct: 132 IEESKELLDAMGIPYIQAS---------------SEGEAQAAFMSSEGDVYAVGSQDWDC 176
Query: 90 LTFGTNILLRQQLSWAT 106
+ FG + ++R S T
Sbjct: 177 MLFGADRMVRNLTSRKT 193
>gi|229581484|ref|YP_002839883.1| flap endonuclease-1 [Sulfolobus islandicus Y.N.15.51]
gi|228012200|gb|ACP47961.1| XPG I domain protein [Sulfolobus islandicus Y.N.15.51]
Length = 302
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K LL MGIP ++ AP E EA+
Sbjct: 65 GKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + G +A A++D D++ FG L+R
Sbjct: 110 AAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
>gi|333910543|ref|YP_004484276.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
gi|333751132|gb|AEF96211.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
Length = 326
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
+ E+ K+ +R+ ++ V+ K+LL LMG+PY+ AP E E Q
Sbjct: 113 NIDEMQKYAKRMNFLTKDIVENSKKLLDLMGVPYVN---------------APAEGEGQA 157
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V+ ++D DAL +G ++R
Sbjct: 158 SYMAKKGDVFCVISQDYDALLYGAPRIVRN 187
>gi|227828219|ref|YP_002829999.1| flap endonuclease-1 [Sulfolobus islandicus M.14.25]
gi|227460015|gb|ACP38701.1| XPG I domain protein [Sulfolobus islandicus M.14.25]
Length = 302
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K LL MGIP ++ AP E EA+
Sbjct: 65 GKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + G +A A++D D++ FG L+R
Sbjct: 110 AAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
>gi|229579856|ref|YP_002838255.1| flap endonuclease-1 [Sulfolobus islandicus Y.G.57.14]
gi|238620410|ref|YP_002915236.1| flap endonuclease-1 [Sulfolobus islandicus M.16.4]
gi|284998466|ref|YP_003420234.1| Xpg I [Sulfolobus islandicus L.D.8.5]
gi|304372803|ref|YP_003858299.1| flap-1 endonuclease [Sulfolobus islandicus L.S.2.15]
gi|385776538|ref|YP_005649106.1| XPG I domain-containing protein [Sulfolobus islandicus REY15A]
gi|228010571|gb|ACP46333.1| XPG I domain protein [Sulfolobus islandicus Y.G.57.14]
gi|238381480|gb|ACR42568.1| XPG I domain protein [Sulfolobus islandicus M.16.4]
gi|284446362|gb|ADB87864.1| Xpg I [Sulfolobus islandicus L.D.8.5]
gi|323475286|gb|ADX85892.1| XPG I domain protein [Sulfolobus islandicus REY15A]
Length = 302
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ ++R+S++ V+E K LL MGIP ++ AP E EA+
Sbjct: 65 GKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQ---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + G +A A++D D++ FG L+R
Sbjct: 110 AAYLNILGFSWAAASQDYDSILFGAKRLVRN 140
>gi|76364187|sp|Q4JAN1.2|FEN_SULAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K+ + VR+S+ V+E K+LL MGIP ++ AP E EA+
Sbjct: 112 GEYREIRKYAQAAVRLSNEMVEESKKLLDAMGIPVVQ---------------APGEGEAE 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + +A A++D D+L FG L+R
Sbjct: 157 AAYINSIDLSWAAASQDYDSLLFGAKRLVR 186
>gi|355570852|ref|ZP_09042122.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
gi|354826134|gb|EHF10350.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
Length = 333
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
LL GD +E + R R+ + ++L++L+G+P+I+ AP E
Sbjct: 110 LLRGDTEEAYRQARSSSRIDEEIIATSRQLITLLGLPWIQ---------------APSEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A MV G ++D D L FG +L+R
Sbjct: 155 EAQAAYMVMRGDARYVVSQDYDTLLFGAPVLVRN 188
>gi|440491836|gb|ELQ74443.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 335
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D +++K+++R +++ H + K LL MG+ Y ++ EAEA C
Sbjct: 116 DKVKMEKYDKRKLKIGKEHTDDIKSLLDAMGVAY---------------TISENEAEAFC 160
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AA+ + G V TEDMDAL F +LL+
Sbjct: 161 AALCRKGIVDYVCTEDMDALCFRAPVLLKN 190
>gi|429965038|gb|ELA47035.1| hypothetical protein VCUG_01480 [Vavraia culicis 'floridensis']
Length = 335
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D E++K+++R +++ H E K LL MG+ Y ++ EAEA C
Sbjct: 116 DKVEMEKYDKRKLKIGKEHTDEIKLLLDAMGVTY---------------TISENEAEAFC 160
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + + G V TEDMDAL F +LL+
Sbjct: 161 ATLCRKGIVDYVCTEDMDALCFRAPVLLKN 190
>gi|71029044|ref|XP_764165.1| DNA repair protein Rad2 [Theileria parva strain Muguga]
gi|68351119|gb|EAN31882.1| DNA repair protein rad2, putative [Theileria parva]
Length = 835
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
+LL G+PYI +AP EAE+QCA M ++GK YA ++D D+L FG
Sbjct: 533 KLLEHFGVPYI---------------VAPSEAESQCAYMNRSGKCYAVISDDSDSLVFGA 577
Query: 95 NILLRQQLSWATFSMH 110
LL+ + F ++
Sbjct: 578 KCLLKNFYNDKVFELY 593
>gi|440633177|gb|ELR03096.1| hypothetical protein GMDG_05935 [Geomyces destructans 20631-21]
Length = 1232
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS + V EC+ LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 878 VSHIMVTECQALLRLFGLPYIT---------------APMEAEAQCAELVTLGLVDGIIT 922
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 923 DDSDVFLFG 931
>gi|84996925|ref|XP_953184.1| endonuclease (xp-g/RAD2 homologue) [Theileria annulata strain
Ankara]
gi|65304180|emb|CAI76559.1| endonuclease (xp-g/RAD2 homologue), putative [Theileria annulata]
Length = 899
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
+LL G+PYI +AP EAE+QCA M ++GK YA ++D D+L FG
Sbjct: 594 KLLDHFGVPYI---------------VAPSEAESQCAYMNRSGKCYAVISDDSDSLVFGA 638
Query: 95 NILLRQQLSWATFSMH 110
LL+ + F ++
Sbjct: 639 KCLLKNFYNDKVFELY 654
>gi|121699074|ref|XP_001267903.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
gi|119396045|gb|EAW06477.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
Length = 1140
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC++LL L G+PY V AP EAEAQCA +V G V T
Sbjct: 815 VTQVMITECQQLLRLFGLPY---------------VTAPMEAEAQCAELVSLGLVDGIIT 859
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 860 DDSDIFLFG 868
>gi|380474820|emb|CCF45572.1| DNA-repair protein rad13 [Colletotrichum higginsianum]
Length = 622
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQCA +V+
Sbjct: 272 KDRRDADEVTQVMVTECQALLRLFGIPYI---------------TAPMEAEAQCAELVRM 316
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
V T+D D FG + + + F + C+
Sbjct: 317 SLVDGIVTDDSDCFLFGGTRIYKNMFNSNKF-VECY 351
>gi|118575473|ref|YP_875216.1| 5'-3' exonuclease [Cenarchaeum symbiosum A]
gi|166973696|sp|A0RU95.1|FEN_CENSY RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|118193994|gb|ABK76912.1| 5'-3' exonuclease [Cenarchaeum symbiosum A]
Length = 340
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ + K+ ++ + V + K++L L GIPYI+ AP E EA
Sbjct: 112 GNMDDARKYAQQTTSMRDGMVDDSKQILKLFGIPYID---------------APSEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + + G YA+A++D D++ FG L+R
Sbjct: 157 AAYLTQTGDAYASASQDFDSVLFGAKRLVR 186
>gi|28380019|sp|Q976H6.2|FEN_SULTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|342306106|dbj|BAK54195.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 351
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+ K+ + +R+++ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 118 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 162
Query: 74 VKAGKVYATATEDMDALTFGTNILLR 99
G +ATA++D D+L FG L+R
Sbjct: 163 NILGLSWATASQDYDSLLFGAKRLIR 188
>gi|11497880|ref|NP_069102.1| flap endonuclease-1 [Archaeoglobus fulgidus DSM 4304]
gi|28380012|sp|O29975.1|FEN_ARCFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|42543625|pdb|1RXV|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543626|pdb|1RXV|B Chain B, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543629|pdb|1RXW|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|2650376|gb|AAB90967.1| DNA repair protein RAD2 (rad2) [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD ++ K+ + RV V K LLS MGIP+++ AP E
Sbjct: 109 LQAGD-KDAKKYAQAAGRVDEYIVDSAKTLLSYMGIPFVD---------------APSEG 152
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ A M G V T ++D D+L FG+ L R
Sbjct: 153 EAQAAYMAAKGDVEYTGSQDYDSLLFGSPRLARN 186
>gi|67538092|ref|XP_662820.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|40743207|gb|EAA62397.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|259484675|tpe|CBF81100.1| TPA: single-stranded DNA endonuclease (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 1141
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + + EC++LL L G+PYI AP EAEAQCA +V G V T
Sbjct: 804 VTQIMITECQQLLRLFGLPYIT---------------APMEAEAQCAELVSLGLVDGIIT 848
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 849 DDSDIFLFG 857
>gi|50551183|ref|XP_503065.1| YALI0D20240p [Yarrowia lipolytica]
gi|49648933|emb|CAG81257.1| YALI0D20240p [Yarrowia lipolytica CLIB122]
Length = 1115
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
++ V EC++LL L GIP+I AP EAEAQCA +V V T
Sbjct: 815 ITQTMVDECQQLLQLFGIPFIT---------------APTEAEAQCATLVNLDLVDGVIT 859
Query: 85 EDMDALTFGTNILLR 99
ED D F +N +R
Sbjct: 860 EDSDVFLFSSNPRMR 874
>gi|359416539|ref|ZP_09208849.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
gi|358033102|gb|EHK01697.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 134
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++E KELL MGIPYI+ A E EAQ A M G VYA ++D D
Sbjct: 25 IEESKELLDAMGIPYIQ---------------ASSEGEAQAAFMSSEGDVYAVGSQDWDC 69
Query: 90 LTFGTNILLRQQLSWAT 106
+ FG + ++R S T
Sbjct: 70 MLFGADRMVRNLTSRKT 86
>gi|429190737|ref|YP_007176415.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|448327264|ref|ZP_21516597.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
gi|429134955|gb|AFZ71966.1| flap structure-specific endonuclease [Natronobacterium gregoryi
SP2]
gi|445608848|gb|ELY62671.1| flap endonuclease-1 [Natronobacterium gregoryi SP2]
Length = 325
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDELAIAQLESRTQRLTETIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG + LRQ
Sbjct: 158 AAHMVRHGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|255552654|ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis]
Length = 1641
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
E K R VSS EC+ELL + G+PYI +AP EAEAQCA
Sbjct: 949 GSEQKKLERNAESVSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQCA 993
Query: 72 AMVKAGKVYATATEDMDALTFG 93
M A V T+D D FG
Sbjct: 994 YMELANLVDGVVTDDSDVFLFG 1015
>gi|448713770|ref|ZP_21702055.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
gi|445789178|gb|EMA39869.1| flap endonuclease-1 [Halobiforma nitratireducens JCM 10879]
Length = 325
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG + LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|359417615|ref|ZP_09209728.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
gi|358032029|gb|EHK00820.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 120
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++E KELL MGIPYI+ S E EAQ A M G VYA ++D D
Sbjct: 53 IEESKELLDAMGIPYIQAS---------------SEGEAQAAFMSSEGDVYAVGSQDWDC 97
Query: 90 LTFGTNILLRQQLSWAT 106
+ FG + ++R S T
Sbjct: 98 MLFGADRMVRNLTSRKT 114
>gi|320586182|gb|EFW98861.1| DNA excision repair protein rad2 [Grosmannia clavigera kw1407]
Length = 1287
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L GIPYI AP EAEAQC+ +V
Sbjct: 894 KDRRDADEVTMVMVSECQALLRLFGIPYI---------------TAPMEAEAQCSELVSL 938
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + F + C+
Sbjct: 939 GLVDGIVTDDSDTFLFGGTRVYKNMFNGNKF-VECF 973
>gi|448355812|ref|ZP_21544561.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
gi|445634520|gb|ELY87699.1| flap endonuclease-1 [Natrialba hulunbeirensis JCM 10989]
Length = 325
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG+ LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGSPYTLRQ 188
>gi|325968460|ref|YP_004244652.1| flap structure-specific endonuclease [Vulcanisaeta moutnovskia
768-28]
gi|323707663|gb|ADY01150.1| flap structure-specific endonuclease [Vulcanisaeta moutnovskia
768-28]
Length = 349
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
L G +E K+ +R + ++ V++ K+LL LMGIP ++ A +
Sbjct: 112 LLEEGKREEARKYAQRALFLTDDMVEDAKKLLVLMGIPVVQ---------------AMAD 156
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A + K GK +A ++D D+L FG L+R
Sbjct: 157 GEAQAAVIAKEGKAWAAGSQDYDSLLFGAPRLVR 190
>gi|432330136|ref|YP_007248279.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
gi|432136845|gb|AGB01772.1| flap structure-specific endonuclease [Methanoregula formicicum
SMSP]
Length = 333
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E K R RV ++ +ELL LMGIP ++ AP E EAQ
Sbjct: 113 GDEAEAYKQARSSTRVDDTIIRTSRELLGLMGIPVVQ---------------APGEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV G ++D D L FG L+R
Sbjct: 158 AAFMVARGDCLYVISQDYDTLLFGAPTLVRN 188
>gi|448358107|ref|ZP_21546792.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
gi|445646678|gb|ELY99662.1| flap endonuclease-1 [Natrialba chahannaoensis JCM 10990]
Length = 325
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG+ LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGSPYTLRQ 188
>gi|448318654|ref|ZP_21508168.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
gi|445598248|gb|ELY52311.1| flap endonuclease-1 [Natronococcus jeotgali DSM 18795]
Length = 325
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLELLDVPVVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +VK G +ED DAL FG + LRQ
Sbjct: 158 AAHLVKRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|448299433|ref|ZP_21489445.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
gi|445588023|gb|ELY42272.1| flap endonuclease-1 [Natronorubrum tibetense GA33]
Length = 325
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDQVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MVK G +ED DAL FG+ LRQ
Sbjct: 158 AAHMVKRGDADYVGSEDYDALLFGSPRTLRQ 188
>gi|359417179|ref|ZP_09209385.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
gi|358032461|gb|EHK01160.1| flap endonuclease-1 [Candidatus Haloredivivus sp. G17]
Length = 103
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++E KELL MGIPYI+ S E EAQ A M G VYA ++D D
Sbjct: 25 IEESKELLDAMGIPYIQAS---------------SEGEAQAAFMSSEGDVYAVGSQDWDC 69
Query: 90 LTFGTNILLRQQLSWAT 106
+ FG + ++R S T
Sbjct: 70 MLFGADRMVRNLTSRKT 86
>gi|70606571|ref|YP_255441.1| flap endonuclease-1 [Sulfolobus acidocaldarius DSM 639]
gi|449066790|ref|YP_007433872.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449069063|ref|YP_007436144.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
gi|68567219|gb|AAY80148.1| XPG/RAD25 related endonuclease [Sulfolobus acidocaldarius DSM 639]
gi|449035298|gb|AGE70724.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449037571|gb|AGE72996.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
Length = 331
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ +EI K+ + VR+S+ V+E K+LL MGIP ++ AP E EA+
Sbjct: 94 GEYREIRKYAQAAVRLSNEMVEESKKLLDAMGIPVVQ---------------APGEGEAE 138
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +A A++D D+L FG L+R
Sbjct: 139 AAYINSIDLSWAAASQDYDSLLFGAKRLVRN 169
>gi|171687395|ref|XP_001908638.1| hypothetical protein [Podospora anserina S mat+]
gi|170943659|emb|CAP69311.1| unnamed protein product [Podospora anserina S mat+]
Length = 1280
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL L G+PYI AP EAEAQCA +V+
Sbjct: 893 KDRRDADEVTQVMVTECQALLRLFGVPYI---------------TAPMEAEAQCAELVRL 937
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
V T+D D FG + + + F + C+
Sbjct: 938 NLVDGIVTDDSDTFLFGGTRVYKNMFNSNKF-VECY 972
>gi|340344625|ref|ZP_08667757.1| Flap structure-specific endonuclease [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519766|gb|EGP93489.1| Flap structure-specific endonuclease [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 341
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+ ++ KF ++ + VKE K++LS GIPYI+ A E EA
Sbjct: 112 GNLEDARKFAQQTTSMKDGMVKESKQILSYFGIPYID---------------AASEGEAT 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + G+ YA+A++D D++ G L+R
Sbjct: 157 AAHLTNTGQAYASASQDFDSILCGAKRLIR 186
>gi|435846409|ref|YP_007308659.1| flap endonuclease 1 [Natronococcus occultus SP4]
gi|433672677|gb|AGB36869.1| flap endonuclease 1 [Natronococcus occultus SP4]
Length = 325
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLELLDVPVVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +VK G +ED DAL FG + LRQ
Sbjct: 158 AAHIVKRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|448321569|ref|ZP_21511045.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
gi|445603121|gb|ELY57089.1| flap endonuclease-1 [Natronococcus amylolyticus DSM 10524]
Length = 325
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDQVAIAQLESRTQRLTPTIQETSRELLELLDVPVVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +VK G +ED DAL FG + LRQ
Sbjct: 158 AAHVVKRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|449446847|ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
Length = 1541
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD Q+ + R V+S EC+ELL + G+PYI +AP EAEAQ
Sbjct: 871 GDEQK--RLERNAESVNSEMFAECQELLQMFGLPYI---------------IAPMEAEAQ 913
Query: 70 CAAMVKAGKVYATATEDMDALTFG 93
CA M A V T+D D FG
Sbjct: 914 CAYMELANLVDGVVTDDSDVFLFG 937
>gi|67937671|gb|AAY83298.1| unknown [Babesia sp. WA1]
Length = 954
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
E+L L GIPY+ AP EAEAQC + ++G+VYA ++D D L FG
Sbjct: 649 EMLDLFGIPYMH---------------APSEAEAQCCFLNQSGEVYAVISDDSDTLPFGA 693
Query: 95 NILLRQQLSWATFSMH 110
+L+ + F ++
Sbjct: 694 RRILKNFFNSRVFEIY 709
>gi|367044124|ref|XP_003652442.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
gi|346999704|gb|AEO66106.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
Length = 1226
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ V + EC+ LL L GIPYI AP EAEAQCA +V+ V T
Sbjct: 867 VTQVMITECQALLRLFGIPYIT---------------APMEAEAQCAELVRLNLVDGIVT 911
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 912 DDSDIFLFG 920
>gi|307594203|ref|YP_003900520.1| flap structure-specific endonuclease [Vulcanisaeta distributa DSM
14429]
gi|307549404|gb|ADN49469.1| flap structure-specific endonuclease [Vulcanisaeta distributa DSM
14429]
Length = 349
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 6 FLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
L G +E K+ +R + ++ V++ K+LL LMGIP ++ A +
Sbjct: 112 LLEEGKREEARKYAQRALFLTDDMVEDAKKLLRLMGIPVVQ---------------AMAD 156
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A + + GK +A ++D D+L FG L+R
Sbjct: 157 GEAQAAVIAREGKAWAAGSQDYDSLLFGAPRLVR 190
>gi|303270955|ref|XP_003054839.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462813|gb|EEH60091.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E ++LL+L GIPYI +AP EAEAQCA + + G V A T+D DA
Sbjct: 4 EVQQLLTLFGIPYI---------------IAPQEAEAQCAWLDREGFVDAVITDDSDAFL 48
Query: 92 FGTNILLRQ 100
FG + R
Sbjct: 49 FGAKTIYRN 57
>gi|383622569|ref|ZP_09948975.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|448694526|ref|ZP_21697026.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
gi|445785111|gb|EMA35906.1| flap endonuclease-1 [Halobiforma lacisalsi AJ5]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLFDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG + LRQ
Sbjct: 158 AAHMVRHGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|288931681|ref|YP_003435741.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
gi|288893929|gb|ADC65466.1| flap structure-specific endonuclease [Ferroglobus placidus DSM
10642]
Length = 336
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
++ K+ + +V V+ K LL +GIPY++ AP E EAQ A
Sbjct: 112 GEDAKKYAQATAKVDEYIVESSKTLLEYLGIPYVQ---------------APSEGEAQAA 156
Query: 72 AMVKAGKVYATATEDMDALTFGTNILLRQ 100
MV+ G T ++D D+L FG+ L R
Sbjct: 157 YMVRKGDADYTGSQDYDSLLFGSPKLARN 185
>gi|452843959|gb|EME45893.1| hypothetical protein DOTSEDRAFT_22018 [Dothistroma septosporum
NZE10]
Length = 925
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 5 LFLLTGDAQEIDKFNRRL----VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
LF+ G + K N+++ VRV+SV K+LL G P+
Sbjct: 75 LFVFDGSNKPTFKRNKKVGGPGVRVASVPEFLAKQLLKQFGFPW---------------H 119
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
+AP EAEA+CA + + G V A +ED+D L FG+ + L+ S T
Sbjct: 120 IAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGVTLKNWSSEGT 165
>gi|213404960|ref|XP_002173252.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
gi|212001299|gb|EEB06959.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
Length = 1199
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 22/97 (22%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
+ ++ D+ N+ +VR EC+ELL G+PYI +AP EAEAQC
Sbjct: 815 ETRDADEVNQEMVR-------ECQELLRYFGLPYI---------------VAPQEAEAQC 852
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATF 107
A +++ V T+D D FG + R + + F
Sbjct: 853 AKLLELKLVDGVVTDDSDVFLFGGTRIYRNMFNQSKF 889
>gi|289582877|ref|YP_003481343.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|448283660|ref|ZP_21474932.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
gi|289532430|gb|ADD06781.1| flap structure-specific endonuclease [Natrialba magadii ATCC 43099]
gi|445573260|gb|ELY27783.1| flap endonuclease-1 [Natrialba magadii ATCC 43099]
Length = 325
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGAPYTLRQ 188
>gi|449019441|dbj|BAM82843.1| probable excision repair protein ERCC5 [Cyanidioschyzon merolae
strain 10D]
Length = 1117
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+ K LL L+GIPYIE A EAEAQCA + +AG V A TED DA
Sbjct: 770 DTKRLLQLLGIPYIE---------------AAMEAEAQCAFLDRAGIVDAVVTEDSDAFL 814
Query: 92 FGTNILLRQ 100
FG + + R
Sbjct: 815 FGASRVYRH 823
>gi|448578528|ref|ZP_21643963.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
gi|445727069|gb|ELZ78685.1| flap endonuclease-1 [Haloferax larsenii JCM 13917]
Length = 326
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTDTIQETSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
+ M + G +ED D L FG LRQ S
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQLTS 192
>gi|281212257|gb|EFA86417.1| xeroderma pigmentosum group G family protein [Polysphondylium
pallidum PN500]
Length = 1515
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
++EC +LLSL GIP+I +P EAEAQCA + G + TED D
Sbjct: 1003 LRECHDLLSLFGIPFIT---------------SPTEAEAQCAELFALGLIDGVVTEDSDT 1047
Query: 90 LTFG 93
L FG
Sbjct: 1048 LLFG 1051
>gi|409722869|ref|ZP_11270258.1| flap endonuclease-1 [Halococcus hamelinensis 100A6]
gi|448722908|ref|ZP_21705436.1| flap endonuclease-1 [Halococcus hamelinensis 100A6]
gi|445788575|gb|EMA39284.1| flap endonuclease-1 [Halococcus hamelinensis 100A6]
Length = 325
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G+A E + R R++ + +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GNAIEAARLESRTQRLTDTIHETTRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
A M ++G V +ED D L FG+ LR+ S
Sbjct: 159 AAHMARSGTVDYAGSEDYDTLLFGSPRTLRKLTS 192
>gi|400597409|gb|EJP65142.1| DNA repair endonuclease rad2 [Beauveria bassiana ARSEF 2860]
Length = 808
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N+R R V + K L+ L G+P ++ AP
Sbjct: 75 IFVFDGPNKPTTKRNKRSGRGDGVANSQAKRLIRLFGLPALD---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V A +ED+D + FG LR
Sbjct: 120 EAEAECALLQRHGIVDAVLSEDVDTIMFGCTKTLRN 155
>gi|118596592|dbj|BAF37955.1| putative flap endonuclease-1 [Sulfolobus sp. NO82]
Length = 304
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E K+ + +R+S+ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 71 EFKKYAQMSIRLSNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 115
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
G +ATA++D D+L FG L+R
Sbjct: 116 NILGLSWATASQDYDSLLFGAKRLVRN 142
>gi|118596582|dbj|BAF37950.1| putative flap endonuclease-1 [Sulfolobus sp. Tu A]
gi|118596584|dbj|BAF37951.1| putative flap endonuclease-1 [Sulfolobus sp. Tu B-1]
gi|118596586|dbj|BAF37952.1| putative flap endonuclease-1 [Sulfolobus sp. Sko-3]
gi|118596588|dbj|BAF37953.1| putative flap endonuclease-1 [Sulfolobus sp. Ta]
Length = 304
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+ K+ + +R+++ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 71 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 115
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
G +ATA++D D+L FG L+R
Sbjct: 116 NILGLSWATASQDYDSLLFGAKRLIRN 142
>gi|292656986|ref|YP_003536883.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|448293584|ref|ZP_21483689.1| flap endonuclease-1 [Haloferax volcanii DS2]
gi|291370541|gb|ADE02768.1| DNA repair flap endonuclease Fen1 [Haloferax volcanii DS2]
gi|445570445|gb|ELY25008.1| flap endonuclease-1 [Haloferax volcanii DS2]
Length = 326
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTETIQDTSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|15920393|ref|NP_376062.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 304
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+ K+ + +R+++ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 71 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 115
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
G +ATA++D D+L FG L+R
Sbjct: 116 NILGLSWATASQDYDSLLFGAKRLIRN 142
>gi|448397895|ref|ZP_21569833.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
gi|445672111|gb|ELZ24688.1| flap endonuclease-1 [Haloterrigena limicola JCM 13563]
Length = 325
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA + + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDAVAVAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M K G +ED DAL FG LRQ
Sbjct: 158 AAHMAKRGDADYVGSEDYDALLFGAPRTLRQ 188
>gi|297600506|ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa Japonica Group]
Length = 1470
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPN 56
+E L LL + + + R+L VSS EC+ELL + G+PYI
Sbjct: 824 LEKELSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYI----------- 872
Query: 57 FLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+AP EAEAQCA M V T+D D FG
Sbjct: 873 ----IAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFG 905
>gi|222624409|gb|EEE58541.1| hypothetical protein OsJ_09837 [Oryza sativa Japonica Group]
Length = 1494
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPN 56
+E L LL + + + R+L VSS EC+ELL + G+PYI
Sbjct: 831 LEKELSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYI----------- 879
Query: 57 FLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+AP EAEAQCA M V T+D D FG
Sbjct: 880 ----IAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFG 912
>gi|218192294|gb|EEC74721.1| hypothetical protein OsI_10446 [Oryza sativa Indica Group]
Length = 1487
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPN 56
+E L LL + + + R+L VSS EC+ELL + G+PYI
Sbjct: 824 LEKELSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYI----------- 872
Query: 57 FLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+AP EAEAQCA M V T+D D FG
Sbjct: 873 ----IAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFG 905
>gi|108706747|gb|ABF94542.1| XPG I-region family protein, expressed [Oryza sativa Japonica
Group]
Length = 1477
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPN 56
+E L LL + + + R+L VSS EC+ELL + G+PYI
Sbjct: 824 LEKELSLLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYI----------- 872
Query: 57 FLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+AP EAEAQCA M V T+D D FG
Sbjct: 873 ----IAPMEAEAQCAYMEMTNLVDGVVTDDSDVFLFG 905
>gi|449304737|gb|EMD00744.1| hypothetical protein BAUCODRAFT_29098 [Baudoinia compniacensis UAMH
10762]
Length = 962
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 22/105 (20%)
Query: 5 LFLLTGDAQEIDKFNRRL----VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
LF+ G + + K N+++ VRV++V K+LL G P+
Sbjct: 75 LFVFDGPNKPLFKRNKKVGGPGVRVATVPEFLAKQLLKEFGFPW---------------H 119
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWA 105
+AP EAEA+CA + + G V A +ED+D L FG+ + R SW+
Sbjct: 120 IAPGEAEAECALLQREGVVDAVLSEDVDTLMFGSGVTFR---SWS 161
>gi|448583086|ref|ZP_21646555.1| flap endonuclease-1 [Haloferax gibbonsii ATCC 33959]
gi|445730043|gb|ELZ81635.1| flap endonuclease-1 [Haloferax gibbonsii ATCC 33959]
Length = 326
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTETIQDTSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|242000896|ref|XP_002435091.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
gi|215498421|gb|EEC07915.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
Length = 868
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R+ +S V EC+ELL + G+P+ V++P EAEAQCA + +
Sbjct: 632 KQQRQATSMSDQLVMECQELLRMFGLPF---------------VVSPGEAEAQCAWLEEQ 676
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G T T+D DA FG + R
Sbjct: 677 GLTQGTVTDDSDAWLFGARTVYRH 700
>gi|358390983|gb|EHK40388.1| hypothetical protein TRIATDRAFT_41742 [Trichoderma atroviride IMI
206040]
Length = 1172
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + EC+ LL L GIPYI AP EAEAQCA +V+ V T
Sbjct: 873 VTQTMITECQALLRLFGIPYIT---------------APMEAEAQCAELVRLNMVDGIVT 917
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 918 DDSDTFLFG 926
>gi|296087697|emb|CBI34953.3| unnamed protein product [Vitis vinifera]
Length = 1449
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD Q K R VSS EC+ELL + G+PYI +AP EAEAQ
Sbjct: 781 GDEQR--KLERNADCVSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQ 823
Query: 70 CAAMVKAGKVYATATEDMDALTFG 93
CA M A V T+D D FG
Sbjct: 824 CAYMELANLVDGVVTDDSDVFLFG 847
>gi|116180814|ref|XP_001220256.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
gi|88185332|gb|EAQ92800.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
Length = 1765
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ V V EC+ LL+L GIPYI AP EAEAQCA +V
Sbjct: 815 KDRRDADEVTQVMVTECQALLTLFGIPYI---------------TAPMEAEAQCAELVHL 859
Query: 77 GKVYATATEDMDALTFG 93
V T+D D FG
Sbjct: 860 NLVDGIVTDDSDTFLFG 876
>gi|406864117|gb|EKD17163.1| DNA excision repair protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1423
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V++V + EC+ LL L G+PYI AP EAEAQCA +V
Sbjct: 989 KDRRDADEVTTVMISECQALLRLFGLPYI---------------TAPMEAEAQCAELVNL 1033
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + + + C+
Sbjct: 1034 GLVDGVVTDDCDIFLFGGTRVYKNMFNSNKY-VECY 1068
>gi|448602383|ref|ZP_21656439.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
gi|445747898|gb|ELZ99352.1| flap endonuclease-1 [Haloferax sulfurifontis ATCC BAA-897]
Length = 326
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTETIQDTSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
+ M + G +ED D L FG LRQ S
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQLTS 192
>gi|448352039|ref|ZP_21540831.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
gi|445631838|gb|ELY85062.1| flap endonuclease-1 [Natrialba taiwanensis DSM 12281]
Length = 316
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLQLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +ED DAL FG + LRQ
Sbjct: 158 AAHMARRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|448309987|ref|ZP_21499840.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
gi|445589008|gb|ELY43247.1| flap endonuclease-1 [Natronorubrum bangense JCM 10635]
Length = 325
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDTVAIAQLESRTQRLTPTIQETSRELLELLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +ED DAL FG + LRQ
Sbjct: 158 AAHMARRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|385805407|ref|YP_005841805.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
gi|383795270|gb|AFH42353.1| flap endonuclease-1 [Fervidicoccus fontis Kam940]
Length = 350
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K+ + R++ VKE +LL MG+P ++ AP E EAQ A
Sbjct: 121 EEARKYAQISTRLNDEMVKEAIKLLDAMGLPTVQ---------------APAEGEAQAAY 165
Query: 73 MVKAGKVYATATEDMDALTFGTNILLR 99
M K G V+++ ++D D++ FG+ ++R
Sbjct: 166 MAKKGDVWSSGSQDYDSILFGSPRVVR 192
>gi|398398872|ref|XP_003852893.1| hypothetical protein MYCGRDRAFT_40040, partial [Zymoseptoria
tritici IPO323]
gi|339472775|gb|EGP87869.1| hypothetical protein MYCGRDRAFT_40040 [Zymoseptoria tritici IPO323]
Length = 517
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 22/108 (20%)
Query: 5 LFLLTGDAQEIDKFNRRL----VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
LF+ G + K N+++ VRV+SV K+LL G P+
Sbjct: 70 LFVFDGPNKPTFKRNKKVGGPGVRVASVPEFLAKQLLKQFGFPWH--------------- 114
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFS 108
+AP EAEA+CA + + G V A +ED+D L FG+ + L+ SW S
Sbjct: 115 VAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGVTLK---SWTAES 159
>gi|333986804|ref|YP_004519411.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
gi|333824948|gb|AEG17610.1| Flap structure-specific endonuclease [Methanobacterium sp. SWAN-1]
Length = 328
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ R R+SS ++ K+LLSLMGIP+I+ A E
Sbjct: 109 LDEGNTEEARKYAVRSSRMSSDVIEGSKKLLSLMGIPHIQ---------------AMGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ + MV+ G + ++D D + FG +++
Sbjct: 154 EAQASYMVEKGDAWCVGSQDYDCVLFGATRMVKN 187
>gi|448365125|ref|ZP_21553668.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
gi|445656129|gb|ELZ08969.1| flap endonuclease-1 [Natrialba aegyptia DSM 13077]
Length = 325
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLELLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +ED DAL FG + LRQ
Sbjct: 158 AAHMARRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|448362827|ref|ZP_21551431.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
gi|445647449|gb|ELZ00423.1| flap endonuclease-1 [Natrialba asiatica DSM 12278]
Length = 291
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLELLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +ED DAL FG + LRQ
Sbjct: 158 AAHMARRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|448565137|ref|ZP_21636108.1| flap endonuclease-1 [Haloferax prahovense DSM 18310]
gi|445715796|gb|ELZ67549.1| flap endonuclease-1 [Haloferax prahovense DSM 18310]
Length = 326
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTETIQDTSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDPLLFGAPYTLRQ 189
>gi|73668744|ref|YP_304759.1| flap endonuclease-1 [Methanosarcina barkeri str. Fusaro]
gi|121723542|sp|Q46D63.1|FEN_METBF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|72395906|gb|AAZ70179.1| flap endonuclease 1 [Methanosarcina barkeri str. Fusaro]
Length = 338
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 8 LTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAE 67
+ GD + K+ + +V V++ K LLS+MGIP+I+ APCE E
Sbjct: 110 VEGDLEAAYKYAQASSKVDQEIVEDSKYLLSIMGIPWIQ---------------APCEGE 154
Query: 68 AQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
AQ A MV A++D D+ FG ++R
Sbjct: 155 AQAAHMVLKKDADYVASQDYDSFLFGAPTVIRN 187
>gi|336255103|ref|YP_004598210.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
gi|335339092|gb|AEH38331.1| Flap structure-specific endonuclease [Halopiger xanaduensis SH-6]
Length = 325
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +V+ G +ED DAL FG + LRQ
Sbjct: 158 AAHIVRRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|118596594|dbj|BAF37956.1| putative flap endonuclease-1 [Sulfolobus sp. G81]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+ K+ + +++S+ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 71 ELKKYAQMSIKLSNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 115
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
G +ATA++D D+L FG L+R
Sbjct: 116 NILGLSWATASQDYDSLLFGAKRLVRN 142
>gi|448305063|ref|ZP_21494997.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
gi|445589598|gb|ELY43826.1| flap endonuclease-1 [Natronorubrum sulfidifaciens JCM 14089]
Length = 325
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 113 GDEVAIAQLESRTQRLTPTIQETSRELLRLLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + G +ED DAL FG + LRQ
Sbjct: 158 AAHMARRGDADYVGSEDYDALLFGAPLTLRQ 188
>gi|255070381|ref|XP_002507272.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
gi|226522547|gb|ACO68530.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
Length = 1108
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+ ++LL+L G+PY V+AP EAEAQCA M G V A TED DA
Sbjct: 803 QIQDLLTLFGVPY---------------VIAPQEAEAQCAWMNSEGLVDAVITEDSDAFL 847
Query: 92 FGTNILLRQ 100
FG + + R
Sbjct: 848 FGASTVYRN 856
>gi|284164367|ref|YP_003402646.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
gi|284014022|gb|ADB59973.1| flap structure-specific endonuclease [Haloterrigena turkmenica DSM
5511]
Length = 325
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R R++ + +ELL + +P +E AP E EAQ
Sbjct: 113 GDQVAIAQLESRTQRLTPTIQETSRELLRRLDVPIVE---------------APAEGEAQ 157
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G +ED DAL FG+ + LRQ
Sbjct: 158 AAHMVRRGDADYVGSEDYDALLFGSPLTLRQ 188
>gi|297526096|ref|YP_003668120.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
gi|297255012|gb|ADI31221.1| flap structure-specific endonuclease [Staphylothermus hellenicus
DSM 12710]
Length = 350
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD + ++ +++ V + K+LL MGIP+I+ A E
Sbjct: 113 LRRGDVEAARRYAMMSAKLTDEMVHDAKKLLDAMGIPWIQ---------------AVAEG 157
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAQ A +V G +A+A++D D+L FG+ L+R
Sbjct: 158 EAQAAYIVGKGDAWASASQDYDSLLFGSPRLIR 190
>gi|123478601|ref|XP_001322462.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121905309|gb|EAY10239.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 651
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V++ H++ K LL +M +PYI +AP E+ A+CA + G V ATA+
Sbjct: 268 VTADHIRAVKGLLDVMDVPYI---------------IAPEESTAECARLELEGIVDATAS 312
Query: 85 EDMDALTFGTNILLR 99
+D +A FG+ IL+R
Sbjct: 313 DDNNAFLFGSKILIR 327
>gi|448726443|ref|ZP_21708848.1| flap endonuclease-1 [Halococcus morrhuae DSM 1307]
gi|445795097|gb|EMA45633.1| flap endonuclease-1 [Halococcus morrhuae DSM 1307]
Length = 325
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R+++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLESRTQRLTTTIHETTRELLDLLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
A M + G V +ED D L FG LR S
Sbjct: 159 AAHMARTGTVDYAGSEDYDTLLFGAPHTLRDLTS 192
>gi|344305257|gb|EGW35489.1| hypothetical protein SPAPADRAFT_69718 [Spathaspora passalidarum
NRRL Y-27907]
Length = 980
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 702 EKLQKAKRDSDEVTETMINDVQELLRRFGIPYIT---------------APMEAEAQCAE 746
Query: 73 MVKAGKVYATATEDMDALTFG 93
++K G V T+D D L FG
Sbjct: 747 LLKIGLVDGIITDDSDCLLFG 767
>gi|346327520|gb|EGX97116.1| flap structure-specific endonuclease [Cordyceps militaris CM01]
Length = 770
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N+R R V + K L+ L G+P ++ AP
Sbjct: 75 VFIFDGPNKPTTKRNKRSGRGDGVANSQAKRLIRLFGLPALD---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
EAEA+CA + + G V A +ED+D + FG LR +W++
Sbjct: 120 EAEAECALLQRHGIVDAVLSEDVDTIMFGCTKTLR---NWSS 158
>gi|448738796|ref|ZP_21720817.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
gi|445801182|gb|EMA51526.1| flap endonuclease-1 [Halococcus thailandensis JCM 13552]
Length = 325
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL+L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLESRTQRLTDTIHETTRELLALLDVPIVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
A M + G V +ED D L FG LR S
Sbjct: 159 AAHMARTGTVDYAGSEDYDTLLFGAPRTLRDLTS 192
>gi|361129990|gb|EHL01866.1| putative DNA repair protein rad13 [Glarea lozoyensis 74030]
Length = 1157
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+S +EC+ LL GIPYI +AP EAEAQCA +V+ G V T
Sbjct: 776 VTSAMNQECQILLKKFGIPYI---------------IAPGEAEAQCAELVRQGLVDGAIT 820
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 821 DDCDIFLFG 829
>gi|435850378|ref|YP_007311964.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661008|gb|AGB48434.1| flap structure-specific endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 338
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E + + RV+ V++ ++LL MGIP+++ AP E E+Q
Sbjct: 112 GLAEEAYMYAQASSRVTHEIVEDSRKLLVAMGIPWVD---------------APSEGESQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A MVK G A++D D+L FG + ++R
Sbjct: 157 AAHMVKRGDANYVASQDYDSLLFGASFVVR 186
>gi|448729889|ref|ZP_21712201.1| flap endonuclease-1 [Halococcus saccharolyticus DSM 5350]
gi|445794210|gb|EMA44763.1| flap endonuclease-1 [Halococcus saccharolyticus DSM 5350]
Length = 325
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAIEAARLEARTQRLTDTIHETTRELLGLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M ++G V +ED D L FG LR
Sbjct: 159 AAHMARSGTVDYAGSEDYDTLLFGAPRTLR 188
>gi|19113794|ref|NP_592882.1| Fen1 family nuclease, XP-G family (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175380|sp|Q09708.1|YAGG_SCHPO RecName: Full=Uncharacterized protein C12G12.16c
gi|929887|emb|CAA90586.1| Fen1 family nuclease, XP-G family (predicted) [Schizosaccharomyces
pombe]
Length = 496
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+DK RRL R S ++ E E+L ++GIP S SP +GV EAEA +A+
Sbjct: 262 ELDKLERRLYRPSPQNIFEIFEILKILGIP---ASFSP------IGV----EAEAFASAI 308
Query: 74 VKAGKVYATATEDMDALTFGTNIL 97
+ YA AT+D D L G++++
Sbjct: 309 SQNNLAYAVATQDTDVLLLGSSMI 332
>gi|190346361|gb|EDK38425.2| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ +K R V+ +++ +ELL GIPYI AP EAEAQCA
Sbjct: 759 EQYNKAKRDSDEVTETMIRDVQELLKRFGIPYIT---------------APMEAEAQCAE 803
Query: 73 MVKAGKVYATATEDMDALTFG 93
++K G V T+D D FG
Sbjct: 804 LMKLGLVDGIITDDSDCFLFG 824
>gi|146417652|ref|XP_001484794.1| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC
6260]
Length = 1035
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ +K R V+ +++ +ELL GIPYI AP EAEAQCA
Sbjct: 759 EQYNKAKRDSDEVTETMIRDVQELLKRFGIPYIT---------------APMEAEAQCAE 803
Query: 73 MVKAGKVYATATEDMDALTFG 93
++K G V T+D D FG
Sbjct: 804 LMKLGLVDGIITDDSDCFLFG 824
>gi|356498232|ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
max]
Length = 1707
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E K R V+S EC+ELL + G+PYI +AP EAEAQCA +
Sbjct: 1007 EQRKLERNAESVNSELFTECQELLQMFGLPYI---------------IAPMEAEAQCAYL 1051
Query: 74 VKAGKVYATATEDMDALTFG 93
V T+D D L FG
Sbjct: 1052 ELEKLVDGVVTDDSDVLLFG 1071
>gi|448546419|ref|ZP_21626583.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|448548406|ref|ZP_21627673.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
gi|448557600|ref|ZP_21632789.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445702872|gb|ELZ54812.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-646]
gi|445714157|gb|ELZ65924.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-644]
gi|445714501|gb|ELZ66263.1| flap endonuclease-1 [Haloferax sp. ATCC BAA-645]
Length = 326
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ E + R R++ +ELLSL+ +P +E AP E EAQ
Sbjct: 114 GDSVEAARMEARTQRLTETIQDTSRELLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|328865755|gb|EGG14141.1| hypothetical protein DFA_11908 [Dictyostelium fasciculatum]
Length = 1098
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 15/82 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
Q+I R + +++ +KEC ELLS+ GIP+I +P EAE+QCA
Sbjct: 770 QKISNQIRSVHSITNDILKECHELLSMFGIPFIT---------------SPTEAESQCAE 814
Query: 73 MVKAGKVYATATEDMDALTFGT 94
+ G V T+D D L F +
Sbjct: 815 LYNLGFVDGVVTDDSDILLFAS 836
>gi|242041837|ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
gi|241922167|gb|EER95311.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
Length = 1489
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VSS EC+ELL + G+PYI +AP EAEAQCA M V T
Sbjct: 865 VSSEMFAECQELLQMFGLPYI---------------IAPTEAEAQCAYMEINNLVDGVVT 909
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 910 DDSDVFLFG 918
>gi|198423155|ref|XP_002121987.1| PREDICTED: similar to Excision repair cross-complementing rodent
repair deficiency, complementation group 5 [Ciona
intestinalis]
Length = 948
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+ I +R VS V EC+ELL L GIP+ VL+P EAEAQCA
Sbjct: 607 ERIKSASRAAREVSDVATMECQELLRLFGIPF---------------VLSPQEAEAQCAF 651
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ T TED D FG
Sbjct: 652 LDMNDLTMGTITEDSDVWLFG 672
>gi|448733248|ref|ZP_21715493.1| flap endonuclease-1 [Halococcus salifodinae DSM 8989]
gi|445802982|gb|EMA53282.1| flap endonuclease-1 [Halococcus salifodinae DSM 8989]
Length = 325
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARLEARTQRLTDTIHETTRELLRLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M ++G V +ED D L FG LR
Sbjct: 159 AAHMARSGTVDYAGSEDYDTLLFGAPHTLR 188
>gi|84489880|ref|YP_448112.1| flap endonuclease-1 [Methanosphaera stadtmanae DSM 3091]
gi|121717163|sp|Q2NFD4.1|FEN_METST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|84373199|gb|ABC57469.1| flap structure-specific endonuclease [Methanosphaera stadtmanae DSM
3091]
Length = 328
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD K+ R ++ +K K+LL LMGIPY++ A E EAQ
Sbjct: 112 GDVVAARKYAARTTHLNKEIIKSSKKLLDLMGIPYVQ---------------ARTEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ MV +A ++D D L FG ++R
Sbjct: 157 ASYMVSQNDAWAVVSQDYDCLQFGATRMIRN 187
>gi|374632950|ref|ZP_09705317.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
gi|373524434|gb|EHP69311.1| flap structure-specific endonuclease [Metallosphaera
yellowstonensis MK1]
Length = 301
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E+ K+++ R++ +E KELLS MG+P + AP E EA+
Sbjct: 65 GKLEEMRKYSQMSSRLTKGMAEESKELLSRMGVPIVN---------------APSEGEAE 109
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A + +A A++D D+L FG L+R
Sbjct: 110 AAYLNYKNITFAAASQDYDSLLFGAKRLIRN 140
>gi|448592407|ref|ZP_21651514.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
gi|445731412|gb|ELZ82996.1| flap endonuclease-1 [Haloferax elongans ATCC BAA-1513]
Length = 326
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTDTIQETSRELLRLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|118596590|dbj|BAF37954.1| putative flap endonuclease-1 [Sulfolobus sp. M02]
Length = 304
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E+ K+ + +++++ +E KELL MGIP ++ AP E EA+ A +
Sbjct: 71 ELKKYAQMSIKLTNEMAEESKELLKAMGIPVVQ---------------APSEGEAEAAYI 115
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
G +ATA++D D+L FG L+R
Sbjct: 116 NILGLSWATASQDYDSLLFGAKRLVRN 142
>gi|357113521|ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
distachyon]
Length = 1460
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VSS EC+ELL + G+PYI +AP EAEAQCA M V T
Sbjct: 864 VSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQCAYMEINNLVDGVVT 908
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 909 DDSDVFLFG 917
>gi|326527491|dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1503
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VSS EC+ELL + G+PYI +AP EAEAQCA M V T
Sbjct: 871 VSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQCAYMEINNLVDGVVT 915
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 916 DDSDVFLFG 924
>gi|294909525|ref|XP_002777787.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
gi|239885749|gb|EER09582.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
Length = 937
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 16 DKFNRRLVRVSSVHVKECKE----LLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
D N+ + + V + KE LL+ GIP+++ APCEAEAQC
Sbjct: 743 DNVNKLAKQQTEVDFRALKEDIQLLLTAFGIPWVD---------------APCEAEAQCV 787
Query: 72 AMVKAGKVYATATEDMDALTFGTNILLRQ 100
A+V+ G ++D D L +G ++LR+
Sbjct: 788 ALVRNGLADGVISDDSDTLMYGAEVVLRR 816
>gi|332029719|gb|EGI69598.1| DNA repair protein complementing XP-G cells-like protein
[Acromyrmex echinatior]
Length = 417
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
A++I KF R+ +S + ++LL L GIPYI +AP EAEAQCA
Sbjct: 23 ARDIGKFERQATNISEQIKTDAQDLLRLFGIPYI---------------IAPMEAEAQCA 67
Query: 72 AMVKAGKVYATATEDMDALTFG 93
+ + T T+D D FG
Sbjct: 68 YLEQIKLTDGTITDDSDIWLFG 89
>gi|307176270|gb|EFN65901.1| DNA-repair protein complementing XP-G cells [Camponotus floridanus]
Length = 1193
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I KF R+ +S E +ELL L GIPYI +AP EAEAQCA +
Sbjct: 808 IGKFERQATNISDQIQTEAQELLRLFGIPYI---------------VAPMEAEAQCAYLE 852
Query: 75 KAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 853 QIELTNGTITDDSDIWLFG 871
>gi|20092799|ref|NP_618874.1| flap endonuclease-1 [Methanosarcina acetivorans C2A]
gi|28380016|sp|Q8TIY5.1|FEN_METAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19918097|gb|AAM07354.1| FlaP endonuclease-1 [Methanosarcina acetivorans C2A]
Length = 338
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + K+ + RV V++ K LL +MGIP+I+ APCE EAQ
Sbjct: 112 GDLEAAYKYAQASSRVDQEIVEDSKYLLGIMGIPWIQ---------------APCEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV A++D D+ FG ++R
Sbjct: 157 AAHMVLKKDADYVASQDYDSFLFGAPKVVRN 187
>gi|403347306|gb|EJY73073.1| hypothetical protein OXYTRI_05797 [Oxytricha trifallax]
Length = 1055
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 1 MELTLFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
+E ++L++ E++K + S + +E K LL L GIP+++
Sbjct: 730 LEENIYLIS----ELEKTAKHFTYFSQENTQELKTLLRLCGIPFVQ-------------- 771
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
AP EAE+QCA + G V TED D L FG + R
Sbjct: 772 -APFEAESQCAFLEINGLVDGVVTEDSDVLLFGARKVYR 809
>gi|302900804|ref|XP_003048331.1| hypothetical protein NECHADRAFT_84053 [Nectria haematococca mpVI
77-13-4]
gi|256729264|gb|EEU42618.1| hypothetical protein NECHADRAFT_84053 [Nectria haematococca mpVI
77-13-4]
Length = 803
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N+R R ++ + K L+ L G P + AP
Sbjct: 75 VFVFDGPYKPKIKRNKRSGRGDALSNAQAKRLIHLFGFPIHD---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V A +ED+D L FG +LRQ
Sbjct: 120 EAEAECALLQQHGIVDAVMSEDVDTLMFGCTKMLRQ 155
>gi|432852332|ref|XP_004067195.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oryzias latipes]
Length = 1078
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L G+P++ +AP EAEAQCAA+ +A + + T T+D D
Sbjct: 692 ESQELLRLFGVPFL---------------VAPMEAEAQCAALDRADQTHGTITDDSDVWL 736
Query: 92 FGTNILLRQQLSWATFSMH 110
FG + + S + H
Sbjct: 737 FGGRHVYKNFFSQNKYVEH 755
>gi|327401884|ref|YP_004342723.1| Flap structure-specific endonuclease [Archaeoglobus veneficus SNP6]
gi|327317392|gb|AEA48008.1| Flap structure-specific endonuclease [Archaeoglobus veneficus SNP6]
Length = 338
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 24 RVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATA 83
RV V+ K+LL MG+P+++ AP E EAQ A M G V T
Sbjct: 125 RVDEYIVESSKKLLEYMGVPWVQ---------------APSEGEAQAAYMAAKGDVDFTG 169
Query: 84 TEDMDALTFGTNILLRQ 100
++D D+L FG+ L R
Sbjct: 170 SQDYDSLLFGSPKLARN 186
>gi|389848285|ref|YP_006350524.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|448618490|ref|ZP_21666727.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|388245591|gb|AFK20537.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
gi|445746861|gb|ELZ98319.1| flap endonuclease-1 [Haloferax mediterranei ATCC 33500]
Length = 326
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA E + R R++ +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDAVEAARMEARTQRLTETIQDTSRELLRLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|260948192|ref|XP_002618393.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
gi|238848265|gb|EEQ37729.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
Length = 1019
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ +++ +ELL GIPYI AP EAEAQCA
Sbjct: 745 EKLQKAKRDSDEVTETMIRDVQELLKRFGIPYIT---------------APMEAEAQCAE 789
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ + G V T+D D FG
Sbjct: 790 LFRMGLVDGIVTDDSDCFLFG 810
>gi|384249049|gb|EIE22531.1| hypothetical protein COCSUDRAFT_6698, partial [Coccomyxa
subellipsoidea C-169]
Length = 262
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+C+ELL L G+PYI +AP EAEAQCA + G V T+D D
Sbjct: 4 DCQELLQLFGLPYI---------------IAPSEAEAQCAWLDANGLVDGVVTDDNDVFL 48
Query: 92 FGTNILLRQ 100
FG + R
Sbjct: 49 FGAKHVYRH 57
>gi|408404695|ref|YP_006862678.1| flap structure-specific endonuclease [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365291|gb|AFU59021.1| flap structure-specific endonuclease [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 341
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++ K+ R ++ V+E K+LLS +GIPYI+ AP + EA
Sbjct: 112 GRIEDARKYGIRTAVLTDKMVEESKKLLSYLGIPYIQ---------------APSDGEAA 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A + + +A A++D D++ FG L+R
Sbjct: 157 AAYLTRRELAFAAASQDYDSILFGAKKLVR 186
>gi|150399374|ref|YP_001323141.1| flap endonuclease-1 [Methanococcus vannielii SB]
gi|150012077|gb|ABR54529.1| XPG I [Methanococcus vannielii SB]
Length = 324
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+ + K+ +R + ++ K LL LMG+PYI AP E EAQCA
Sbjct: 115 ENMQKYAKRANFLDKKTIENSKRLLELMGVPYIN---------------APSEGEAQCAE 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+VK+ ++D D++ +G +++
Sbjct: 160 LVKSKNASFVVSQDYDSILYGAESVVKN 187
>gi|356532054|ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 607
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 15/76 (19%)
Query: 24 RVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATA 83
R+ S HV+EC EL+ L+G+P ++ A EAEA CA + G V A
Sbjct: 115 RLFSSHVQECAELVELLGMPVLK---------------AKGEAEALCAQLNSEGHVDACI 159
Query: 84 TEDMDALTFGTNILLR 99
T D DA FG +++
Sbjct: 160 TADSDAFLFGAKCIIK 175
>gi|354547816|emb|CCE44551.1| hypothetical protein CPAR2_403540 [Candida parapsilosis]
Length = 994
Score = 47.8 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 716 EKLHKAKRDSDEVTENMIGDVQELLKRFGIPYIT---------------APMEAEAQCAE 760
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
+ K G V T+D D FG + + + S F + C+
Sbjct: 761 LYKIGLVDGIITDDSDCFLFGGDRIYKNMFSQKQF-VECY 799
>gi|310831026|ref|YP_003969669.1| putative DNA endonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386210|gb|ADO67070.1| putative DNA endonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 321
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ +R +S + E KELL LMGIPY++ A EA+ CA + +
Sbjct: 120 KYFKRTTSLSRKQIIESKELLDLMGIPYLQ---------------ADGEADILCAKLCEK 164
Query: 77 GKVYATATEDMDALTFG 93
V TED+D LTFG
Sbjct: 165 NIVDYVLTEDIDILTFG 181
>gi|452983877|gb|EME83635.1| hypothetical protein MYCFIDRAFT_154172 [Pseudocercospora fijiensis
CIRAD86]
Length = 788
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 5 LFLLTGDAQEIDKFNRRL----VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGV 60
LF+ G + + K N+++ VRV+SV K+LL P+
Sbjct: 75 LFVFDGPNKPLFKRNKKVGGPGVRVASVPEFLAKQLLKQFAFPW---------------H 119
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+AP EAEA+CA + + G V A +ED+D L FG+ LR
Sbjct: 120 VAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGTTLRN 159
>gi|194760687|ref|XP_001962569.1| GF15526 [Drosophila ananassae]
gi|190616266|gb|EDV31790.1| GF15526 [Drosophila ananassae]
Length = 1237
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
A + T T+D D FG
Sbjct: 889 NAADLTHGTITDDSDIWLFG 908
>gi|149237300|ref|XP_001524527.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452062|gb|EDK46318.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1129
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ + + +ELL GIP+I AP EAEAQCA
Sbjct: 851 EKLQKAKRDSDEVTETMIYDVQELLKRFGIPFIT---------------APMEAEAQCAE 895
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
++K G V T+D D FG + + + + F + C+
Sbjct: 896 LLKIGLVDGIVTDDSDCFLFGGDKVYKNMFNQKQF-VECY 934
>gi|406860923|gb|EKD13979.1| hypothetical protein MBM_07656 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1010
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 5 LFLLTGDAQEIDKFNRRLVRV-SSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
LF+ G + K N+R+ R +S K+LL L G P AP
Sbjct: 75 LFVFDGPQRPQLKRNKRVGRGGASASDMAAKQLLKLFGFPCHN---------------AP 119
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAEA+CA + + G V A +ED+D L FG+ I LR
Sbjct: 120 GEAEAECALLQRKGIVDAVLSEDVDTLMFGSGITLR 155
>gi|328857380|gb|EGG06497.1| hypothetical protein MELLADRAFT_36164 [Melampsora larici-populina
98AG31]
Length = 288
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 31 KECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDAL 90
K+ + +L L GIPY V++P EAEAQCA ++K G V T+D D
Sbjct: 130 KDIQSMLRLFGIPY---------------VISPMEAEAQCAELLKKGLVDGIITDDSDVF 174
Query: 91 TFGTNILLRQQLSWATFSMHCW 112
FG + + + F + C+
Sbjct: 175 LFGGTRVYKNMFNQNKF-VECY 195
>gi|448407650|ref|ZP_21573845.1| flap endonuclease-1 [Halosimplex carlsbadense 2-9-1]
gi|445674900|gb|ELZ27435.1| flap endonuclease-1 [Halosimplex carlsbadense 2-9-1]
Length = 326
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD + + + R++ + +E+L L+ +P IE AP E EAQ
Sbjct: 114 GDGVAVARLESQTQRLTDTILSTTREVLELLDVPVIE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
M + G V TED DAL G + LRQ S
Sbjct: 159 ATHMAREGAVDYVGTEDYDALLLGAPLTLRQLTS 192
>gi|195397917|ref|XP_002057574.1| GJ18024 [Drosophila virilis]
gi|194141228|gb|EDW57647.1| GJ18024 [Drosophila virilis]
Length = 1238
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 859 ERNRQDRMGMSISQRMSNDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 903
Query: 74 VKAGKVYATATEDMDALTFG 93
G T T+D D FG
Sbjct: 904 NAVGITNGTITDDSDIWLFG 923
>gi|282165429|ref|YP_003357814.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
gi|282157743|dbj|BAI62831.1| flap structure-specific endonuclease [Methanocella paludicola
SANAE]
Length = 339
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + +++ +K+ KELL MG+P++ +AP E EAQ A MV+
Sbjct: 118 KYAQASTSINAQIIKDSKELLGYMGMPFL---------------IAPSEGEAQAAYMVQK 162
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G ++D D+L FG ++R
Sbjct: 163 GAADFVGSQDYDSLLFGAPRMVRN 186
>gi|195116755|ref|XP_002002917.1| GI10377 [Drosophila mojavensis]
gi|193913492|gb|EDW12359.1| GI10377 [Drosophila mojavensis]
Length = 1255
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 8 LTGDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
L G+ +E++ R R +S +C++LL L GIPYI +AP
Sbjct: 842 LAGERRELEAERNRQDRMGLSISQRMSSDCQDLLRLFGIPYI---------------VAP 886
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFG 93
EAEAQCA + G T T+D D FG
Sbjct: 887 MEAEAQCAFLNAVGITNGTITDDSDIWLFG 916
>gi|76802527|ref|YP_327535.1| flap endonuclease-1 [Natronomonas pharaonis DSM 2160]
gi|121696716|sp|Q3IPG8.1|FEN_NATPD RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|76558392|emb|CAI49983.1| flap endonuclease Fen1 [Natronomonas pharaonis DSM 2160]
Length = 328
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 26/114 (22%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
DA EI R R++ V+ +ELL+ + +P +E AP E EAQ
Sbjct: 117 DAAEIAALESRTQRLTDTIVETTRELLARLDVPVVE---------------APAEGEAQA 161
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLRQQLS---------WATFSMH--CWE 113
A M + G +ED DAL G LR S AT S H WE
Sbjct: 162 AHMARRGDADYVGSEDYDALLLGAPYTLRGLTSNGDPECMDFEATLSTHDLSWE 215
>gi|241954550|ref|XP_002419996.1| DNA-repair protein RAD2 orthologue, putative; single-stranded DNA
endonuclease, putative [Candida dubliniensis CD36]
gi|223643337|emb|CAX42212.1| DNA-repair protein RAD2 orthologue, putative [Candida dubliniensis
CD36]
Length = 992
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 715 EKFQKAKRDSDEVTEAMINDVQELLKRFGIPYIT---------------APMEAEAQCAE 759
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ K G V T+D D FG
Sbjct: 760 LFKIGLVDGIVTDDSDCFLFG 780
>gi|308810128|ref|XP_003082373.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
gi|116060841|emb|CAL57319.1| 5'-3' exonuclease (ISS), partial [Ostreococcus tauri]
Length = 987
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 24 RVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATA 83
+V+ ++ +ELL+L GIPYI +AP EAEAQCA + + V A
Sbjct: 618 QVTDEMYRDVQELLTLFGIPYI---------------IAPQEAEAQCAYLNEQKLVDAVI 662
Query: 84 TEDMDALTFGTNILLRQ 100
T+D D FG +++ R
Sbjct: 663 TDDSDVFLFGASLVYRN 679
>gi|448568151|ref|ZP_21637728.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
gi|445727101|gb|ELZ78715.1| flap endonuclease-1 [Haloferax lucentense DSM 14919]
Length = 326
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E + R R++ +ELLSL +P +E AP E EAQ
Sbjct: 114 GDLVEAARMEARTQRLTETIQDTSRELLSLFDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARTGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|51013165|gb|AAT92876.1| YGR258C [Saccharomyces cerevisiae]
Length = 1031
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS +GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRLGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|68486229|ref|XP_709963.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
gi|68486286|ref|XP_713000.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434429|gb|EAK93839.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434462|gb|EAK93871.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
Length = 990
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 713 EKFQKAKRDSDEVTETMINDVQELLKRFGIPYIT---------------APMEAEAQCAE 757
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ K G V T+D D FG
Sbjct: 758 LYKIGLVDGIVTDDSDCFLFG 778
>gi|448622799|ref|ZP_21669448.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
gi|445753307|gb|EMA04724.1| flap endonuclease-1 [Haloferax denitrificans ATCC 35960]
Length = 326
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD+ E + R R++ ++LLSL+ +P +E AP E EAQ
Sbjct: 114 GDSVEAARMEARTQRLTETIQDTSRKLLSLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M + G +ED D L FG LRQ
Sbjct: 159 ASYMARKGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|238881502|gb|EEQ45140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 990
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 713 EKFQKAKRDSDEVTEAMINDVQELLKRFGIPYIT---------------APMEAEAQCAE 757
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ K G V T+D D FG
Sbjct: 758 LYKIGLVDGIVTDDSDCFLFG 778
>gi|448414274|ref|ZP_21577413.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
gi|445682567|gb|ELZ34984.1| flap endonuclease-1 [Halosarcina pallida JCM 14848]
Length = 326
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GDA + R R++ +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDALAASRLEARTQRLTETIQTTSRELLELLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G +ED D L FG LRQ
Sbjct: 159 ASHMAKRGDADYVGSEDYDTLLFGAPYTLRQ 189
>gi|298675706|ref|YP_003727456.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
gi|298288694|gb|ADI74660.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
Length = 338
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G +E K+ + R+ + + K LL MGIPY++ +P E EAQ
Sbjct: 112 GLTEEAYKYAQGSARIDDQILDDAKYLLESMGIPYLQ---------------SPSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV+ G ++D DAL FG ++R
Sbjct: 157 AAHMVQKGDADYVGSQDYDALLFGAPHVIRN 187
>gi|312377995|gb|EFR24684.1| hypothetical protein AND_10542 [Anopheles darlingi]
Length = 1428
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E +K NR V ++ +C ELL L G+PYI +AP EAEAQCA
Sbjct: 906 REKNKQNRLGVSITDQMRNDCMELLQLFGVPYI---------------VAPMEAEAQCAF 950
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ + T T+D D FG
Sbjct: 951 LNQIELTDGTITDDSDIWLFG 971
>gi|294496492|ref|YP_003542985.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
gi|292667491|gb|ADE37340.1| flap endonuclease 1 [Methanohalophilus mahii DSM 5219]
Length = 339
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G ++++ K+ + +V ++ V++ +LL MGIP ++ AP E EAQ
Sbjct: 112 GLSEDVYKYAQASSKVDALIVEDSMQLLDYMGIPCVQ---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLR 99
A MV G +A++D D+L FG ++R
Sbjct: 157 AAYMVNKGDADYSASQDYDSLLFGAPRVIR 186
>gi|294660024|ref|XP_462477.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
gi|199434412|emb|CAG90987.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ +++ +ELL GIPYI AP EAEAQCA
Sbjct: 755 EQLQKAKRDSDEVTETMIRDVQELLRRFGIPYIT---------------APMEAEAQCAE 799
Query: 73 MVKAGKVYATATEDMDALTFG 93
++K V T+D D FG
Sbjct: 800 LLKLNLVDGIITDDSDCFLFG 820
>gi|407922590|gb|EKG15687.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 691
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 5 LFLLTGDAQEIDKFNRRL-VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
LF+ G + K N+R V+S+ K+LL G P+ +AP
Sbjct: 75 LFVFDGPNKPPFKRNKRTGPNVASIPEFLAKQLLKQFGFPF---------------HIAP 119
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V +ED+D L FG+ I LR
Sbjct: 120 GEAEAECALLQREGIVDVVLSEDVDTLMFGSRITLRN 156
>gi|414865352|tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
Length = 1531
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VSS EC+ELL + G+PYI +AP EAEAQCA M V T
Sbjct: 912 VSSEMFAECQELLQMFGLPYI---------------IAPMEAEAQCAYMEINNLVDGVVT 956
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 957 DDSDVFLFG 965
>gi|347441118|emb|CCD34039.1| hypothetical protein [Botryotinia fuckeliana]
Length = 939
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVS-SVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
LF+ G + K N++ R S S+ KELL L G Y +AP
Sbjct: 75 LFVFDGPHKPPVKRNKQTGRGSASIPDLMTKELLKLFGFAY---------------HIAP 119
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWA 105
EAEA+CA + + G V A +ED+D L FG+ + R SW+
Sbjct: 120 GEAEAECALLQREGVVDAVLSEDVDTLMFGSGLTFR---SWS 158
>gi|348516587|ref|XP_003445820.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oreochromis niloticus]
Length = 1119
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L G+PY+ +AP EAEAQCAA+ A + T T+D D
Sbjct: 730 ESQELLRLFGVPYL---------------VAPMEAEAQCAALDWADHTHGTITDDSDVWL 774
Query: 92 FGTNILLRQQLSWATFSMH 110
FG + + S + H
Sbjct: 775 FGGRHVYKNFFSQDKYVEH 793
>gi|323456781|gb|EGB12647.1| hypothetical protein AURANDRAFT_4733, partial [Aureococcus
anophagefferens]
Length = 238
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 20/104 (19%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E+ + +R V+ ++ LL L+G+PY V+AP EAEAQCAA
Sbjct: 109 REMSRSSRDADSVTEDMREDTMHLLRLLGVPY---------------VVAPMEAEAQCAA 153
Query: 73 MVKAGKVYATATEDMDALTFGT-----NILLRQQLSWATFSMHC 111
+ AG T+D DA FG NI ++ A ++ C
Sbjct: 154 LEAAGLCEGVVTDDSDAFCFGARRVYKNIFDDRKYVEAYYASDC 197
>gi|145352686|ref|XP_001420669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580904|gb|ABO98962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 31 KECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDAL 90
++ +ELL+L GIPYI +AP EAEAQCA + + V A T+D D
Sbjct: 3 RDVQELLTLFGIPYI---------------IAPQEAEAQCAYLNQHKLVDAVITDDSDVF 47
Query: 91 TFGTNILLRQQLS 103
FG + + R S
Sbjct: 48 LFGASHVYRNFFS 60
>gi|257388818|ref|YP_003178591.1| flap endonuclease-1 [Halomicrobium mukohataei DSM 12286]
gi|257171125|gb|ACV48884.1| XPG I domain protein [Halomicrobium mukohataei DSM 12286]
Length = 326
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD++ + + + + R++ + +E+L L+ +P ++ AP E EAQ
Sbjct: 114 GDSKAVARLDSQTQRLTDTILTTTREVLRLLDVPVVD---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A M + V TED DAL G + LRQ
Sbjct: 159 AAHMARQNVVDYVGTEDYDALLLGAPLTLRQ 189
>gi|448530440|ref|XP_003870064.1| Rad2 protein [Candida orthopsilosis Co 90-125]
gi|380354418|emb|CCG23933.1| Rad2 protein [Candida orthopsilosis]
Length = 995
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ + + +ELL GIPYI AP EAEAQCA
Sbjct: 717 EKLQKAKRDSDEVTENMISDVQELLKRFGIPYIT---------------APMEAEAQCAE 761
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
+ + G V T+D D FG + + + + F + C+
Sbjct: 762 LFRIGLVDGIITDDSDCFLFGGDRIYKNMFNQKQF-VECY 800
>gi|312067080|ref|XP_003136574.1| hypothetical protein LOAG_00986 [Loa loa]
Length = 882
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 15/69 (21%)
Query: 31 KECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDAL 90
K+C++LL + GIPY V+AP EAEAQC + + G V+ ++D D
Sbjct: 499 KDCQDLLRICGIPY---------------VIAPGEAEAQCCELERLGLVHGIISDDSDVW 543
Query: 91 TFGTNILLR 99
+FG ++ +
Sbjct: 544 SFGAAMVYK 552
>gi|393908823|gb|EFO27494.2| hypothetical protein LOAG_00986 [Loa loa]
Length = 880
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 15/69 (21%)
Query: 31 KECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDAL 90
K+C++LL + GIPY V+AP EAEAQC + + G V+ ++D D
Sbjct: 497 KDCQDLLRICGIPY---------------VIAPGEAEAQCCELERLGLVHGIISDDSDVW 541
Query: 91 TFGTNILLR 99
+FG ++ +
Sbjct: 542 SFGAAMVYK 550
>gi|322707737|gb|EFY99315.1| putative DNA repair endonuclease rad2 [Metarhizium anisopliae ARSEF
23]
Length = 480
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + I K N+R R K L+ L G P + AP
Sbjct: 30 IFVFDGSNKPIFKRNKRSGRGDGATTAAAKHLIRLFGFPIHD---------------APG 74
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
E EA+CA + + G V A +ED+D + FG LR +W++
Sbjct: 75 EGEAECALLQRHGIVDAVLSEDVDTIMFGCTKTLR---NWSS 113
>gi|405969706|gb|EKC34660.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 955
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KEC E+L +G+PY+ +P EAEA CAA+ +G V A T D DA
Sbjct: 115 LKECCEMLDYLGVPYVH---------------SPGEAEATCAALNASGVVDACLTNDGDA 159
Query: 90 LTFGTNILLR 99
+G + R
Sbjct: 160 FLYGARTVYR 169
>gi|341039026|gb|EGS24018.1| nuclease-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 922
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + I K NRR + V K L+ L G F AP
Sbjct: 75 IFVFDGPNKPIFKRNRRSGTGNGVSTAMAKRLIRLFG---------------FTAHDAPG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAEA+CA + + G V A +ED+D + FG+ + LR
Sbjct: 120 EAEAECAYLEQQGIVDAVLSEDVDTIMFGSRVTLR 154
>gi|365765505|gb|EHN07013.1| Rad2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|349578461|dbj|GAA23627.1| K7_Rad2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|323354903|gb|EGA86736.1| Rad2p [Saccharomyces cerevisiae VL3]
Length = 998
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|259146759|emb|CAY80016.1| Rad2p [Saccharomyces cerevisiae EC1118]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|256272689|gb|EEU07666.1| Rad2p [Saccharomyces cerevisiae JAY291]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|207344901|gb|EDZ71889.1| YGR258Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|151943533|gb|EDN61844.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|6321697|ref|NP_011774.1| Rad2p [Saccharomyces cerevisiae S288c]
gi|131811|sp|P07276.2|RAD2_YEAST RecName: Full=DNA repair protein RAD2
gi|172329|gb|AAA66928.1| RAD2 [Saccharomyces cerevisiae]
gi|1323470|emb|CAA97287.1| RAD2 [Saccharomyces cerevisiae]
gi|285812449|tpg|DAA08349.1| TPA: Rad2p [Saccharomyces cerevisiae S288c]
gi|392299514|gb|EIW10608.1| Rad2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1031
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPYI AP EAEAQCA +++ V T+D D
Sbjct: 772 IKEVQELLSRFGIPYIT---------------APMEAEAQCAELLQLNLVDGIITDDSDV 816
Query: 90 LTFG 93
FG
Sbjct: 817 FLFG 820
>gi|198476637|ref|XP_002132415.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
gi|198137788|gb|EDY69817.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
Length = 1236
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSTDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 889 NATELTHGTITDDSDIWLFG 908
>gi|195155670|ref|XP_002018724.1| GL25951 [Drosophila persimilis]
gi|194114877|gb|EDW36920.1| GL25951 [Drosophila persimilis]
Length = 1238
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 846 ERNRQDRMGMSISQRMSTDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 890
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 891 NATELTHGTITDDSDIWLFG 910
>gi|384493818|gb|EIE84309.1| hypothetical protein RO3G_09019 [Rhizopus delemar RA 99-880]
Length = 816
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+ + +ELL L GIPYI ++P EAEAQCAA+ + + T T+D D
Sbjct: 658 IGDIQELLKLFGIPYI---------------VSPMEAEAQCAALERLKLIEGTITDDSDV 702
Query: 90 LTFGTNILLRQQLSWATFSMHCW 112
FG + + + + F + C+
Sbjct: 703 FLFGASRVYKNMFNQQRF-VECY 724
>gi|410722033|ref|ZP_11361349.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
gi|410597930|gb|EKQ52534.1| flap endonuclease 1 [Methanobacterium sp. Maddingley MBC34]
Length = 328
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF R R+S V+ K+L+ LMGIPYI+ A E EAQ + MV
Sbjct: 119 KFAVRSSRMSPEIVEGSKKLIKLMGIPYIQ---------------AKGEGEAQASYMVAR 163
Query: 77 GKVYATATEDMDALTFG 93
G + A++D D + FG
Sbjct: 164 GDAWCVASQDYDCMLFG 180
>gi|150865308|ref|XP_001384465.2| hypothetical protein PICST_35911 [Scheffersomyces stipitis CBS
6054]
gi|149386564|gb|ABN66436.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 992
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ + + +ELL GIPYI AP EAEAQCA +VK
Sbjct: 716 KSKRDSDEVTQNMITDVQELLRRFGIPYIT---------------APMEAEAQCAELVKI 760
Query: 77 GKVYATATEDMDALTFG 93
G V T+D D FG
Sbjct: 761 GLVDGIITDDSDCFLFG 777
>gi|256070941|ref|XP_002571800.1| xp-G/rad2 DNA repair endonuclease family [Schistosoma mansoni]
gi|353228641|emb|CCD74812.1| putative xp-G/rad2 DNA repair endonuclease family [Schistosoma
mansoni]
Length = 991
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
++ D+ R+ ++ + E ++LL L G P+ V++P EAEAQC A
Sbjct: 641 EKADRLTRQAQSTTTRCISEAQDLLHLFGFPF---------------VVSPEEAEAQCVA 685
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
+ + G V A++D D FG ++ R
Sbjct: 686 LQRHGLVDLVASDDSDVWPFGVKLVCRH 713
>gi|47230549|emb|CAF99742.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L G+P++ +AP EAEAQCAA+ +A + T T+D D
Sbjct: 676 ESQELLRLFGVPFL---------------IAPMEAEAQCAALDRADHTHGTITDDSDVWL 720
Query: 92 FG 93
FG
Sbjct: 721 FG 722
>gi|124485183|ref|YP_001029799.1| flap endonuclease-1 [Methanocorpusculum labreanum Z]
gi|166973701|sp|A2SQC6.1|FEN_METLZ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|124362724|gb|ABN06532.1| flap endonuclease 1 [Methanocorpusculum labreanum Z]
Length = 333
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L GD + K+ ++ + + KELLS +GI +I+ AP E
Sbjct: 110 LKEGDEESARKYAMASSKIDAFIIDSSKELLSALGIAWIQ---------------APEEG 154
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ + M K G V ++D D+L FG L+R
Sbjct: 155 EAQSSFMTKNGDVTYAVSQDYDSLLFGAPDLVRN 188
>gi|433637770|ref|YP_007283530.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
gi|433289574|gb|AGB15397.1| flap structure-specific endonuclease [Halovivax ruber XH-70]
Length = 326
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R++ + +ELL L+ +P +E AP E EAQ
Sbjct: 114 GDQVAIAQLESYTQRLTPTIQETSRELLRLLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +V+ G +ED DAL FG+ LRQ
Sbjct: 159 AANIVRNGDADYVGSEDYDALLFGSPRTLRQ 189
>gi|238597041|ref|XP_002394219.1| hypothetical protein MPER_05929 [Moniliophthora perniciosa FA553]
gi|215462894|gb|EEB95149.1| hypothetical protein MPER_05929 [Moniliophthora perniciosa FA553]
Length = 156
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEV 47
G A+++D+F+RR V+V+ H +EC LL LMGIP I V
Sbjct: 119 GTAEDVDRFSRRTVKVTKQHNEECVRLLKLMGIPVIIV 156
>gi|350417449|ref|XP_003491427.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Bombus
impatiens]
Length = 1107
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I K R+ + +S E +ELL L GIPYI +AP EAEAQCA +
Sbjct: 724 IGKLERQGIDISDQIQIEAQELLRLFGIPYI---------------IAPMEAEAQCAYLE 768
Query: 75 KAGKVYATATEDMDALTFG 93
+ + T T+D D FG
Sbjct: 769 QIHLIDGTITDDSDIWLFG 787
>gi|406604494|emb|CCH44056.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 1010
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ +KE +ELL+ GIPYI AP EAEAQCA +++ V T
Sbjct: 739 VTVTMIKEVQELLARFGIPYIT---------------APMEAEAQCAELLQLNLVDGIIT 783
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 784 DDSDVFLFG 792
>gi|156054070|ref|XP_001592961.1| hypothetical protein SS1G_05883 [Sclerotinia sclerotiorum 1980]
gi|154703663|gb|EDO03402.1| hypothetical protein SS1G_05883 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 749
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 19/103 (18%)
Query: 5 LFLLTGDAQEIDKFNRRLVRV-SSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
LF+ G + K N++ R +S+ KELL L G Y +AP
Sbjct: 75 LFVFDGPHKPPVKRNKQTGRGGASIPDLMTKELLKLFGFEY---------------HIAP 119
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
EAEA+CA + + G V A +ED+D L FG+ + R SW++
Sbjct: 120 GEAEAECALLQREGVVDAVLSEDVDTLMFGSGLTFR---SWSS 159
>gi|5712619|gb|AAD47568.1|AF125578_1 DNA repair endonuclease [Drosophila melanogaster]
Length = 1236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 889 NATDLTHGTITDDSDIWLFG 908
>gi|78706854|ref|NP_001027232.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
gi|10728671|gb|AAG22424.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
Length = 1257
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 865 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 909
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 910 NATDLTHGTITDDSDIWLFG 929
>gi|195577623|ref|XP_002078668.1| GD23543 [Drosophila simulans]
gi|194190677|gb|EDX04253.1| GD23543 [Drosophila simulans]
Length = 1235
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 843 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 887
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 888 NATDLTHGTITDDSDIWLFG 907
>gi|194863176|ref|XP_001970313.1| GG10553 [Drosophila erecta]
gi|190662180|gb|EDV59372.1| GG10553 [Drosophila erecta]
Length = 1237
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 845 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 889
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 890 NATDLTHGTITDDSDIWLFG 909
>gi|5758316|gb|AAD50780.1|AF162793_1 XPG variant [Drosophila melanogaster]
Length = 1257
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 865 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 909
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 910 NATDLTHGTITDDSDIWLFG 929
>gi|78706850|ref|NP_001027230.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
gi|78706852|ref|NP_001027231.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|5051952|gb|AAD38375.1|AF144092_1 nucleotide excision repair protein MUS201 [Drosophila melanogaster]
gi|7297419|gb|AAF52678.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|28380312|gb|AAO41169.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
Length = 1236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 889 NATDLTHGTITDDSDIWLFG 908
>gi|145546103|ref|XP_001458735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426556|emb|CAK91338.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 11 DAQEIDKF--------NRRLVRVSSVHVKE----CKELLSLMGIPYIEVSRSPRLLPNFL 58
+ +E+D + N+ L + SV +++ ++LL+L GIP+I
Sbjct: 531 NGEELDAYEMIDNIRRNQNLQSLDSVTMQQKFEDIRQLLALFGIPWI------------- 577
Query: 59 GVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
+AP EAEAQCA + + G V TED D FG +L+
Sbjct: 578 --IAPGEAEAQCAYLQQNGLVDCVITEDSDVFLFGATKVLK 616
>gi|5758314|gb|AAD50779.1|AF162792_1 XPG [Drosophila melanogaster]
Length = 1236
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 889 NATDLTHGTITDDSDIWLFG 908
>gi|326663749|ref|XP_003197653.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Danio rerio]
Length = 1022
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 15/86 (17%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ +E +ELL L G+P+I +AP EAEAQCAA+ + + + T T
Sbjct: 654 VTGQMCQESQELLRLFGVPFI---------------VAPMEAEAQCAALDRLDQTHGTIT 698
Query: 85 EDMDALTFGTNILLRQQLSWATFSMH 110
+D D FG + R + + H
Sbjct: 699 DDSDIWLFGGRHVYRNFFNQNKYVEH 724
>gi|195473066|ref|XP_002088817.1| GE18773 [Drosophila yakuba]
gi|194174918|gb|EDW88529.1| GE18773 [Drosophila yakuba]
Length = 1237
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 845 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 889
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 890 NATDLTHGTITDDSDIWLFG 909
>gi|357620639|gb|EHJ72769.1| hypothetical protein KGM_08405 [Danaus plexippus]
Length = 1103
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
QE K +R ++ KE +ELL + GIPYI +AP EAEAQCA
Sbjct: 693 QEKGKLDRIGRNITEQMTKEAQELLQIFGIPYI---------------VAPMEAEAQCAV 737
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 738 LEALKLTDGTITDDSDIWLFG 758
>gi|325959793|ref|YP_004291259.1| Flap structure-specific endonuclease [Methanobacterium sp. AL-21]
gi|325331225|gb|ADZ10287.1| Flap structure-specific endonuclease [Methanobacterium sp. AL-21]
Length = 328
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 7 LLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
L G+ +E K+ R R+S ++ K+LL ++G+PYI+ A E
Sbjct: 109 LEEGNLEEARKYAVRSSRMSRDIIEGSKKLLEILGVPYIQ---------------ALGEG 153
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAQ + MV+ G + ++D D + FG ++R
Sbjct: 154 EAQASYMVENGDAWCVGSQDYDCILFGATRMVRN 187
>gi|452209484|ref|YP_007489598.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
gi|452099386|gb|AGF96326.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
Length = 338
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + +V +++ K LL +MGIP+I+ APCE EAQ A MV
Sbjct: 119 KYAQASSKVDQDIIEDSKYLLDIMGIPWIQ---------------APCEGEAQAAHMVLK 163
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
A++D D+ FG ++R
Sbjct: 164 KDADCVASQDYDSFLFGAPTVVRN 187
>gi|51092043|gb|AAT94435.1| RE62451p [Drosophila melanogaster]
Length = 932
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 844 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 888
Query: 74 VKAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 889 NATDLTHGTITDDSDIWLFG 908
>gi|401625605|gb|EJS43605.1| rad2p [Saccharomyces arboricola H-6]
Length = 1034
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+KE +ELLS GIPY V AP EAEAQCA +++ V T+D D
Sbjct: 775 IKEVQELLSRFGIPY---------------VTAPMEAEAQCAELLQLKLVDGIITDDSDV 819
Query: 90 LTFG 93
FG
Sbjct: 820 FLFG 823
>gi|21227008|ref|NP_632930.1| flap endonuclease-1 [Methanosarcina mazei Go1]
gi|28380015|sp|Q8PYF6.1|FEN_METMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|20905326|gb|AAM30602.1| FLAP endonuclease-1 [Methanosarcina mazei Go1]
Length = 338
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + +V +++ K LL +MGIP+I+ APCE EAQ A MV
Sbjct: 119 KYAQASSKVDQDIIEDSKYLLDIMGIPWIQ---------------APCEGEAQAAHMVLK 163
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
A++D D+ FG ++R
Sbjct: 164 KDADCVASQDYDSFLFGAPTVVRN 187
>gi|193083976|gb|ACF09651.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote AD1000-56-E4]
gi|193084049|gb|ACF09722.1| XPG I flap structure-specific endonuclease [uncultured marine
crenarchaeote KM3-86-C1]
Length = 341
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 9 TGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEA 68
+GD + K+ ++ + V++ K L L GIPY++ A + EA
Sbjct: 111 SGDLESARKYAQQTTSMQDTMVEDSKHFLDLFGIPYVQ---------------AKADGEA 155
Query: 69 QCAAMVKAGKVYATATEDMDALTFGTNILLR 99
A M K G A A++D D++ FG L+R
Sbjct: 156 TAAYMNKNGMADAVASQDFDSILFGAVKLIR 186
>gi|410670767|ref|YP_006923138.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
gi|409169895|gb|AFV23770.1| flap endonuclease-1 [Methanolobus psychrophilus R15]
Length = 338
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G A+E K+ + RV + V++ ++LL+ MGIP+++ AP E EAQ
Sbjct: 112 GLAEEAYKYAQASSRVDATIVEDSRKLLNAMGIPFLD---------------APSEGEAQ 156
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A MV ++D D+L FG ++R
Sbjct: 157 AAYMVIKRDADYAGSQDYDSLLFGAPRVVRN 187
>gi|358341292|dbj|GAA49005.1| DNA excision repair protein ERCC-5 [Clonorchis sinensis]
Length = 1013
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
+ D+ R+ + V+E + LL L G+P+I ++P EAEAQC A+
Sbjct: 590 QADRLTRQAQTTTQRCVEEAQNLLQLFGMPFI---------------VSPEEAEAQCVAL 634
Query: 74 VKAGKVYATATEDMDALTFGTNILLRQ 100
++G V A++D D FG ++ R
Sbjct: 635 QQSGLVDLVASDDSDVWPFGARLVCRH 661
>gi|307206657|gb|EFN84629.1| DNA-repair protein complementing XP-G cells [Harpegnathos saltator]
Length = 1139
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+ I K R+ +S E +ELL L GIPY V+AP EAEAQCA
Sbjct: 748 RNIGKLERQATNISEQIRIEAQELLRLFGIPY---------------VVAPMEAEAQCAY 792
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ + T T+D D FG
Sbjct: 793 LEQIKLTDGTITDDSDIWLFG 813
>gi|347838149|emb|CCD52721.1| hypothetical protein [Botryotinia fuckeliana]
Length = 808
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 53 LLPNFLGVL------APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
+L N LG+L AP EAEA+CA + + G V TED DAL FG +L+R
Sbjct: 111 VLQNCLGLLGVRWHEAPGEAEAECAVLQRRGVVDCVWTEDGDALMFGCGVLMR 163
>gi|383863581|ref|XP_003707258.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Megachile rotundata]
Length = 1072
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I K R+ + +S E +ELL L GIPYI +AP EAEAQCA +
Sbjct: 687 IGKLERQGIDISDRIRTEAQELLRLFGIPYI---------------VAPMEAEAQCAYLE 731
Query: 75 KAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 732 QIHLTDGTITDDSDIWLFG 750
>gi|255721529|ref|XP_002545699.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
gi|240136188|gb|EER35741.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
Length = 963
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 15/81 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ K R V+ + + +ELL GIP+I AP EAEAQCA
Sbjct: 689 EKLQKAKRDSDEVTEAMINDVQELLRRFGIPFIT---------------APMEAEAQCAE 733
Query: 73 MVKAGKVYATATEDMDALTFG 93
+ + G V T+D D FG
Sbjct: 734 LFRIGLVDGIVTDDSDCFLFG 754
>gi|393220967|gb|EJD06452.1| PIN domain-like protein, partial [Fomitiporia mediterranea MF3/22]
Length = 1250
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ + + +L L GIPYI AP EAEAQCAA+V G V T
Sbjct: 815 VNQAMIAQIMTMLRLFGIPYIT---------------APMEAEAQCAALVDLGLVDGVIT 859
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 860 DDSDVFLFG 868
>gi|346979176|gb|EGY22628.1| hypothetical protein VDAG_04066 [Verticillium dahliae VdLs.17]
Length = 828
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + I K N+R R + K L+ L G P + AP
Sbjct: 75 VFVFDGPNKPIFKRNKRSGRGDGIASAMAKRLIRLFGFPIHQ---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V A +ED+D + FG + R
Sbjct: 120 EAEAECALLQQEGLVDAVLSEDVDTIMFGCSRTFRN 155
>gi|358060342|dbj|GAA93747.1| hypothetical protein E5Q_00393 [Mixia osmundae IAM 14324]
Length = 1209
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
G Q+ D+ N ++ KE + +L L GIPY++ AP EAEAQ
Sbjct: 802 GQQQKTDRRN--ADEITQQMAKEIRVMLRLFGIPYVD---------------APMEAEAQ 844
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
CA + AG V T+D D FG + + + + + C+
Sbjct: 845 CAQLWMAGLVDGIITDDSDVFLFGGGRVFKNMFNQNKY-VECF 886
>gi|118596628|dbj|BAF37974.1| flap endonuclease-1 [Thermoplasma sp. P61]
Length = 328
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ R+ ++ V + K+LL MGIPYI+ AP E EAQ +
Sbjct: 114 EDLRQYYSRINYITPQIVDDTKKLLDYMGIPYID---------------APSEGEAQASY 158
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M K V ++D D L FG +LR
Sbjct: 159 MTKKN-VDGVISQDYDCLLFGARKILRN 185
>gi|448121834|ref|XP_004204307.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358349846|emb|CCE73125.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1063
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+ + +ELL GIPYI +AP EAEAQCA +++ G V T+D D
Sbjct: 801 ISDVQELLKRFGIPYI---------------IAPMEAEAQCAELMRIGLVDGIITDDSDC 845
Query: 90 LTFG 93
FG
Sbjct: 846 FLFG 849
>gi|448124207|ref|XP_004204862.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358249495|emb|CCE72561.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1067
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+ + +ELL GIPYI +AP EAEAQCA +++ G V T+D D
Sbjct: 805 ISDVQELLKRFGIPYI---------------IAPMEAEAQCAELMRIGLVDGIITDDSDC 849
Query: 90 LTFG 93
FG
Sbjct: 850 FLFG 853
>gi|342879765|gb|EGU81001.1| hypothetical protein FOXB_08476 [Fusarium oxysporum Fo5176]
Length = 800
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N++ R S + K L+ L G + AP
Sbjct: 81 IFVFDGPYKPAVKRNKKSGRGDSFANAQAKRLIRLFGCNTHD---------------APG 125
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWATFS 108
EAEA+CA + K G V TED+DAL FG +LRQ W+ S
Sbjct: 126 EAEAECALLQKHGIVDMVLTEDVDALMFGCTKMLRQ---WSPAS 166
>gi|47201249|emb|CAF87424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 15/60 (25%)
Query: 34 KELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+ELL L G+P++ +AP EAEAQCAA+ +A + + T T+D D FG
Sbjct: 56 EELLRLFGVPFL---------------IAPMEAEAQCAALDRADQTHGTITDDSDVWLFG 100
>gi|367004070|ref|XP_003686768.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
gi|357525070|emb|CCE64334.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
Length = 1051
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ +K +ELL+ GIPYI +AP EAEAQCA ++K
Sbjct: 778 KSKRDSDEVTQDMIKSVQELLTRFGIPYI---------------VAPMEAEAQCAELLKL 822
Query: 77 GKVYATATEDMDALTFG 93
V T+D D FG
Sbjct: 823 KLVDGIITDDSDVFLFG 839
>gi|154295677|ref|XP_001548273.1| hypothetical protein BC1G_13109 [Botryotinia fuckeliana B05.10]
Length = 422
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 23 VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYAT 82
+ + + ++ +ELL L G Y +AP EAEA+CA + + G V A
Sbjct: 39 ISIWNFQIQSGQELLKLFGFAY---------------HIAPGEAEAECALLQREGVVDAV 83
Query: 83 ATEDMDALTFGTNILLRQQLSWA 105
+ED+D L FG+ + R SW+
Sbjct: 84 LSEDVDTLMFGSGLTFR---SWS 103
>gi|50302949|ref|XP_451412.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640543|emb|CAH03000.1| KLLA0A09427p [Kluyveromyces lactis]
Length = 1011
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 17/83 (20%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
+ Q+ DK + V + +H E + LLS GIPYI AP EAEAQC
Sbjct: 734 EQQKKDKRDADEVTIEMIH--EIQSLLSRFGIPYIT---------------APMEAEAQC 776
Query: 71 AAMVKAGKVYATATEDMDALTFG 93
A +++ V T+D D FG
Sbjct: 777 ATLLQLKLVDGVITDDSDVFLFG 799
>gi|396498478|ref|XP_003845243.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
gi|312221824|emb|CBY01764.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
Length = 935
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
LAP EAEA+CA + + G V A +ED+D L FG+ I LR
Sbjct: 117 LAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGITLR 155
>gi|347838150|emb|CCD52722.1| hypothetical protein [Botryotinia fuckeliana]
Length = 599
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 44 YIEVSRSPRLLPNF---LGVL---APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNIL 97
Y +S+ RLL LGV+ AP EAEA+CAA+ G V A TED DA FG L
Sbjct: 106 YKYLSQDDRLLKKMATSLGVIWHEAPDEAEAECAALQSRGVVDAIWTEDSDAFMFGCTSL 165
Query: 98 LR 99
+R
Sbjct: 166 IR 167
>gi|294459945|ref|NP_001170894.1| DNA repair protein complementing XP-G cells [Taeniopygia guttata]
Length = 1176
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 777 ESQELLRLFGIPYIE---------------APTEAEAQCALLDLTDQTSGTITDDSDVWL 821
Query: 92 FG 93
FG
Sbjct: 822 FG 823
>gi|449272261|gb|EMC82261.1| DNA repair protein complementing XP-G cell [Columba livia]
Length = 1133
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 725 ESQELLRLFGIPYIE---------------APMEAEAQCAVLDLTDQTSGTITDDSDVWL 769
Query: 92 FG 93
FG
Sbjct: 770 FG 771
>gi|313126141|ref|YP_004036411.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|448285981|ref|ZP_21477218.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
gi|312292506|gb|ADQ66966.1| flap endonuclease 1 [Halogeometricum borinquense DSM 11551]
gi|445575574|gb|ELY30047.1| flap endonuclease-1 [Halogeometricum borinquense DSM 11551]
Length = 326
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD E + R R++ V + + LL + +P IE AP E EAQ
Sbjct: 114 GDDMEAARLEARTQRLTDVIHETSRGLLERLDVPVIE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
+ M K G V +ED D L G LRQ
Sbjct: 159 ASYMAKQGDVDYVGSEDYDTLLLGAPYTLRQ 189
>gi|326913904|ref|XP_003203272.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Meleagris gallopavo]
Length = 1121
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 725 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDVWL 769
Query: 92 FG 93
FG
Sbjct: 770 FG 771
>gi|448374758|ref|ZP_21558548.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
gi|445659884|gb|ELZ12686.1| flap endonuclease-1 [Halovivax asiaticus JCM 14624]
Length = 326
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%)
Query: 10 GDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQ 69
GD I + R++ + +ELL + +P +E AP E EAQ
Sbjct: 114 GDQVAIAQLESYTQRLTPTIQETSRELLRFLDVPVVE---------------APAEGEAQ 158
Query: 70 CAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
A +V+ G +ED DAL FG+ LRQ
Sbjct: 159 AANIVRNGDADYVGSEDYDALLFGSPRTLRQ 189
>gi|77736641|ref|NP_001029995.1| XPG-complementing protein [Gallus gallus]
gi|71725078|dbj|BAE16755.1| XPG [Gallus gallus]
Length = 1118
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 725 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDVWL 769
Query: 92 FG 93
FG
Sbjct: 770 FG 771
>gi|50287803|ref|XP_446331.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525638|emb|CAG59255.1| unnamed protein product [Candida glabrata]
Length = 992
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
AQ++ K R V+ +K+ +ELL+ GIPYI AP EAEAQCA
Sbjct: 716 AQQV-KDKRDADEVTMDMIKDVQELLARFGIPYIT---------------APMEAEAQCA 759
Query: 72 AMVKAGKVYATATEDMDALTFG 93
+V V T+D D FG
Sbjct: 760 ELVNLKLVDGIITDDSDVFLFG 781
>gi|402224833|gb|EJU04895.1| hypothetical protein DACRYDRAFT_104789 [Dacryopinax sp. DJM-731 SS1]
Length = 1334
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Query: 13 QEIDKFN--RRLVRVSSVHVK-----ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
+EI+ N RR V+S V + + +L L GIPY +AP E
Sbjct: 949 EEINTLNQQRRAALVASEDVTLQMITQIQNMLRLFGIPY---------------TVAPME 993
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFG 93
AEAQCA +V+ G V T+D D FG
Sbjct: 994 AEAQCAELVQLGLVEGIITDDSDVFLFG 1021
>gi|298711922|emb|CBJ48609.1| DNA repair enzyme [Ectocarpus siliculosus]
Length = 1835
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E +K R V+ +E +LL L G+PY V+AP EAEAQC
Sbjct: 1288 REGNKAQRDAETVTEEMKEEVMDLLKLFGVPY---------------VVAPMEAEAQCCV 1332
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLS 103
+ + V T T+D DA FG + + S
Sbjct: 1333 LEQLRLVDGTVTDDSDAFAFGGRAVYKNIFS 1363
>gi|334346854|ref|XP_001376389.2| PREDICTED: hypothetical protein LOC100025456 [Monodelphis
domestica]
Length = 1410
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 925 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 969
Query: 92 FGTNILLRQQLSWATF 107
FG + + S F
Sbjct: 970 FGARHVYKNFFSKDKF 985
>gi|118596598|dbj|BAF37958.1| flap endonuclease-1 [Thermoplasma sp. S02]
Length = 336
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ R+ ++ V + K+LL MGIPY++ AP E EAQ +
Sbjct: 114 EDLRQYYSRINYITPQIVDDTKKLLDYMGIPYVD---------------APSEGEAQASY 158
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M K V ++D D L FG +LR
Sbjct: 159 MTKKN-VDGVISQDYDCLLFGARKILRN 185
>gi|395527335|ref|XP_003765805.1| PREDICTED: uncharacterized protein LOC100931484 [Sarcophilus
harrisii]
Length = 1088
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 674 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 718
Query: 92 FG 93
FG
Sbjct: 719 FG 720
>gi|16082069|ref|NP_394495.1| flap endonuclease-1 [Thermoplasma acidophilum DSM 1728]
gi|28380022|sp|Q9HJD4.1|FEN_THEAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|10640350|emb|CAC12164.1| DNA repair protein RAD2 related protein [Thermoplasma acidophilum]
Length = 336
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ R+ ++ V + K+LL MGIPY++ AP E EAQ +
Sbjct: 114 EDLRQYYSRINYITPQIVDDTKKLLDYMGIPYVD---------------APSEGEAQASY 158
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M K V ++D D L FG +LR
Sbjct: 159 MTKKN-VDGVISQDYDCLLFGARKILRN 185
>gi|410912947|ref|XP_003969950.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Takifugu rubripes]
Length = 875
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L G+P++ +AP EAEAQCAA+ + + T T+D D
Sbjct: 477 ESQELLQLFGVPFL---------------VAPMEAEAQCAALDRDDHTHGTITDDSDVWL 521
Query: 92 FG 93
FG
Sbjct: 522 FG 523
>gi|310796699|gb|EFQ32160.1| hypothetical protein GLRG_07304 [Glomerella graminicola M1.001]
Length = 869
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N+R R V K ++ L G P + AP
Sbjct: 109 IFVFDGPHKPAFKRNKRSGRGDGVATAMAKRVIRLFGFPLHD---------------APG 153
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V A +ED+D + FG LR
Sbjct: 154 EAEAECALLQQRGIVDAVLSEDVDTIMFGCTRTLRN 189
>gi|195339243|ref|XP_002036229.1| GM16947 [Drosophila sechellia]
gi|194130109|gb|EDW52152.1| GM16947 [Drosophila sechellia]
Length = 1108
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+C+ELL L GIPYI +AP EAEAQCA + + T T+D D
Sbjct: 734 DCQELLRLFGIPYI---------------VAPMEAEAQCAFLNATDLTHGTITDDSDIWL 778
Query: 92 FG 93
FG
Sbjct: 779 FG 780
>gi|116754923|ref|YP_844041.1| flap endonuclease-1 [Methanosaeta thermophila PT]
gi|121693591|sp|A0B9M7.1|FEN_METTP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|116666374|gb|ABK15401.1| flap endonuclease 1 [Methanosaeta thermophila PT]
Length = 336
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
++ + R++S + + LL MGIPY++ AP E EAQ A M
Sbjct: 117 RYAQATARINSEILHDSIRLLDAMGIPYVQ---------------APSEGEAQAAFMAIR 161
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G V A++D D+L FG ++R
Sbjct: 162 GDVDYVASQDYDSLLFGAPRVVRN 185
>gi|5689765|emb|CAB52135.1| Nucleotide excision repair protein [Drosophila melanogaster]
Length = 378
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+C+ELL L GIPYI +AP EAEAQCA + + T T+D D
Sbjct: 4 DCQELLRLFGIPYI---------------VAPMEAEAQCAFLNATDLTHGTITDDSDIWL 48
Query: 92 FGTNILLRQ 100
FG + +
Sbjct: 49 FGGRTVYKN 57
>gi|324501186|gb|ADY40530.1| DNA repair protein RAD2 [Ascaris suum]
Length = 947
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 15/69 (21%)
Query: 31 KECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDAL 90
KEC+ELL L GIP+ V++P EAEAQC + + G V ++D D
Sbjct: 497 KECQELLRLCGIPF---------------VVSPGEAEAQCCELERLGLVQGIVSDDSDVW 541
Query: 91 TFGTNILLR 99
FG + + +
Sbjct: 542 LFGASTVYK 550
>gi|254581574|ref|XP_002496772.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
gi|238939664|emb|CAR27839.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
Length = 1030
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V++ + + ++LLS G+PYI AP EAEAQCA +++ V T
Sbjct: 766 VTADMITDVQDLLSRFGVPYIT---------------APMEAEAQCATLMRDRLVDGVIT 810
Query: 85 EDMDALTFGTNILLRQQLS 103
+D D FG N + + S
Sbjct: 811 DDSDVFLFGGNKVYKNMFS 829
>gi|431913228|gb|ELK14910.1| DNA repair protein complementing XP-G cell [Pteropus alecto]
Length = 1074
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 663 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 707
Query: 92 FGTNILLRQQLSWATF 107
FG + + S F
Sbjct: 708 FGARHVYKNFFSKNKF 723
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 20 RRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKV 79
R VS+ + E +ELL L G+P++ ++P EAEAQCA + G+
Sbjct: 116 RASAEVSTEMLNESQELLRLFGVPFL---------------VSPMEAEAQCAFLDMTGQT 160
Query: 80 YATATEDMDALTFG 93
T T+D D FG
Sbjct: 161 DGTITDDSDVFLFG 174
>gi|91773853|ref|YP_566545.1| flap endonuclease-1 [Methanococcoides burtonii DSM 6242]
gi|121684238|sp|Q12UT1.1|FEN_METBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|91712868|gb|ABE52795.1| FEN1 flap endonuclease with 5'-3' exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K+ + +V+ + + LL LMGIPY++ AP E EAQ +
Sbjct: 115 EEAYKYAQASSKVTREMIDDSVRLLELMGIPYVK---------------APSEGEAQASY 159
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
MV+ G ++D D+ FG ++R
Sbjct: 160 MVQKGDADYIGSQDYDSFLFGAPQVVRN 187
>gi|389603118|ref|XP_001568459.2| putative DNA repair protein RAD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505733|emb|CAM43572.2| putative DNA repair protein RAD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1029
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
ELL G+PY VL+P EA+AQCA + + G V A TED D L G
Sbjct: 743 ELLDCCGVPY---------------VLSPAEADAQCAFLARRGLVDAVFTEDSDVLVHGA 787
Query: 95 NILLR 99
+LR
Sbjct: 788 TTVLR 792
>gi|452000823|gb|EMD93283.1| hypothetical protein COCHEDRAFT_1223047 [Cochliobolus
heterostrophus C5]
Length = 926
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
LAP EAEA+CA + + G V A +ED+D L FG+ + LR
Sbjct: 122 LAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGVTLR 160
>gi|169606572|ref|XP_001796706.1| hypothetical protein SNOG_06329 [Phaeosphaeria nodorum SN15]
gi|160707030|gb|EAT86160.2| hypothetical protein SNOG_06329 [Phaeosphaeria nodorum SN15]
Length = 739
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
LAP EAEA+CA + + G V A +ED+D L FG+ I +R
Sbjct: 70 LAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGITIR 108
>gi|429848013|gb|ELA23547.1| flap structure-specific endonuclease [Colletotrichum
gloeosporioides Nara gc5]
Length = 542
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N+R + V K L+ L G P + AP
Sbjct: 75 IFVFDGPHKPAFKRNKRSGKGGGVATAMAKRLIRLFGFPVHD---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLSWAT 106
EAEA+CA + + G V A +ED+D + FG LR +W++
Sbjct: 120 EAEAECALLQQQGIVDAVLSEDVDTIMFGCTRTLR---NWSS 158
>gi|451854672|gb|EMD67964.1| hypothetical protein COCSADRAFT_187007 [Cochliobolus sativus
ND90Pr]
Length = 934
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
LAP EAEA+CA + + G V A +ED+D L FG+ + LR
Sbjct: 122 LAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGVTLR 160
>gi|385304582|gb|EIF48594.1| single-stranded dna cleaves single-stranded dna during nucleotide
excision repair [Dekkera bruxellensis AWRI1499]
Length = 577
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
VS+ + + ++LLS GIP+I AP EAEAQCA + V T
Sbjct: 362 VSTSMILDVQDLLSRFGIPFIT---------------APMEAEAQCAELFGLKLVDGIVT 406
Query: 85 EDMDALTFGTNILLRQQLSWATFSMHCWE 113
+D D FG +I+ + + F + C++
Sbjct: 407 DDSDCFLFGGSIIYKNMFNEKNF-VECYQ 434
>gi|398023565|ref|XP_003864944.1| DNA repair protein RAD2, putative [Leishmania donovani]
gi|322503180|emb|CBZ38264.1| DNA repair protein RAD2, putative [Leishmania donovani]
Length = 930
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
ELL G+PY VL+P EA+AQCA + + G V A TED D L G
Sbjct: 644 ELLDCCGVPY---------------VLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGA 688
Query: 95 NILLR 99
+LR
Sbjct: 689 TTVLR 693
>gi|154309183|ref|XP_001553926.1| hypothetical protein BC1G_07486 [Botryotinia fuckeliana B05.10]
Length = 399
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 44 YIEVSRSPRLLPNF---LGVL---APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNIL 97
Y +S+ RLL LGV+ AP EAEA+CAA+ G V A TED DA FG L
Sbjct: 73 YKYLSQDDRLLKKMATSLGVIWHEAPGEAEAECAALQSRGVVDAIWTEDSDAFMFGCTSL 132
Query: 98 LR 99
+R
Sbjct: 133 IR 134
>gi|146101653|ref|XP_001469167.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
gi|134073536|emb|CAM72269.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
Length = 930
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
ELL G+PY VL+P EA+AQCA + + G V A TED D L G
Sbjct: 644 ELLDCCGVPY---------------VLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGA 688
Query: 95 NILLR 99
+LR
Sbjct: 689 TTVLR 693
>gi|409048628|gb|EKM58106.1| hypothetical protein PHACADRAFT_88937 [Phanerochaete carnosa
HHB-10118-sp]
Length = 538
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
D ++RR ++ E KE++ MG+P IE P EAEA A+MV
Sbjct: 318 FDSYSRRTQPPTTQTYDESKEIIRAMGVPCIEPD-------------GPFEAEALAASMV 364
Query: 75 KAGKVYATATEDMDALTFGTNIL 97
G+ A+ED D + +G ++
Sbjct: 365 LHGQADYVASEDTDVIVYGAPLM 387
>gi|401429746|ref|XP_003879355.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495605|emb|CBZ30910.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 930
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
ELL G+PY VL+P EA+AQCA + + G V A TED D L G
Sbjct: 644 ELLDCCGVPY---------------VLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGA 688
Query: 95 NILLR 99
+LR
Sbjct: 689 TTVLR 693
>gi|302418945|ref|XP_003007303.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261352954|gb|EEY15382.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 833
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + + K N+R R + K L+ L G P + AP
Sbjct: 75 VFVFDGPNKPLFKRNKRSGRGDGIASAMAKRLIRLFGFPIHQ---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V A +ED+D + FG + R
Sbjct: 120 EAEAECALLQQEGLVDAVLSEDVDTIMFGCSRTFRN 155
>gi|195454489|ref|XP_002074261.1| GK18419 [Drosophila willistoni]
gi|194170346|gb|EDW85247.1| GK18419 [Drosophila willistoni]
Length = 1247
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 855 ERNRQDRMGMSISQRMSIDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 899
Query: 74 VKAGKVYATATEDMDALTFG 93
T T+D D FG
Sbjct: 900 NATELTNGTITDDSDIWLFG 919
>gi|290992099|ref|XP_002678672.1| predicted protein [Naegleria gruberi]
gi|284092285|gb|EFC45928.1| predicted protein [Naegleria gruberi]
Length = 985
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 7 LLTGDAQEIDKFNRR--LVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+ D ID FN + + V K+LL+ +G+PY+ ++P
Sbjct: 642 MFDSDYPMIDLFNSKSKTTNLFFALVDLAKDLLTYLGVPYL---------------VSPS 686
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EA+AQC + K V A TED D FG N + R
Sbjct: 687 EADAQCGFLSKHNLVDAVITEDSDLFLFGANCVYR 721
>gi|156082429|ref|XP_001608699.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis T2Bo]
gi|317374876|sp|A7AX58.1|FEN1_BABBO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154795948|gb|EDO05131.1| XPG N-terminal domain and XPG I-region domain containing protein
[Babesia bovis]
Length = 672
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 11 DAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQC 70
D + I K+ R VR++ + K+LL L+G+P IE + AEAQC
Sbjct: 121 DKEAIRKYVGRTVRITQKENESAKKLLRLVGVPVIEAAEE---------------AEAQC 165
Query: 71 AAMVKAGKVYATATEDMDALTFGTNILLR 99
A + + G V A +ED DAL F +LL+
Sbjct: 166 AYLCQRGFVTAVGSEDADALVFRCGVLLK 194
>gi|383320867|ref|YP_005381708.1| flap endonuclease 1 [Methanocella conradii HZ254]
gi|379322237|gb|AFD01190.1| flap endonuclease 1 [Methanocella conradii HZ254]
Length = 339
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + +++ +++ K LL MGIP+I +AP E EAQ + MV
Sbjct: 118 KYAQAATSINAQIIEDSKTLLGYMGIPFI---------------VAPSEGEAQASCMVSK 162
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G ++D D+L FG ++R
Sbjct: 163 GAADYVGSQDYDSLLFGAPRMVRN 186
>gi|303607|dbj|BAA03812.1| ERCC5 [Homo sapiens]
Length = 1185
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAVLDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|147920854|ref|YP_685339.1| flap endonuclease-1 [Methanocella arvoryzae MRE50]
gi|121690538|sp|Q0W6I0.1|FEN_UNCMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|110620735|emb|CAJ36013.1| flap structure-specific endonuclease [Methanocella arvoryzae MRE50]
Length = 340
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 22/89 (24%)
Query: 12 AQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCA 71
AQ NR++V + K LL MGIP+I +AP E EAQ A
Sbjct: 120 AQASTSINRQIV-------DDAKVLLGYMGIPFI---------------VAPSEGEAQAA 157
Query: 72 AMVKAGKVYATATEDMDALTFGTNILLRQ 100
MV G ++D D+L FG ++R
Sbjct: 158 YMVSRGAADYVGSQDYDSLLFGAPRVVRN 186
>gi|417406083|gb|JAA49718.1| Putative 5'-3' exonuclease [Desmodus rotundus]
Length = 1189
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 778 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 822
Query: 92 FG 93
FG
Sbjct: 823 FG 824
>gi|432119340|gb|ELK38422.1| DNA repair protein complementing XP-G cells [Myotis davidii]
Length = 1164
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 779 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 823
Query: 92 FG 93
FG
Sbjct: 824 FG 825
>gi|393242077|gb|EJD49596.1| hypothetical protein AURDEDRAFT_182745 [Auricularia delicata
TFB-10046 SS5]
Length = 1291
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 15/59 (25%)
Query: 36 LLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
LL L GIPYI AP EAEAQCA +V G V T+D D FG+
Sbjct: 891 LLRLFGIPYIT---------------APMEAEAQCATLVALGLVEGVITDDSDVFLFGS 934
>gi|330914144|ref|XP_003296510.1| hypothetical protein PTT_06636 [Pyrenophora teres f. teres 0-1]
gi|311331271|gb|EFQ95374.1| hypothetical protein PTT_06636 [Pyrenophora teres f. teres 0-1]
Length = 934
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 5 LFLLTGDAQEIDKFNRRL-VRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAP 63
+F+ G + K N+R V+SV K+LL G P LAP
Sbjct: 75 IFVFDGPNKPPFKRNKRTGPNVASVPEFLAKQLLKQFGYPI---------------HLAP 119
Query: 64 CEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
EAEA+CA + + G V A +ED+D L FG+ I +R
Sbjct: 120 GEAEAECALLQREGIVDAVLSEDVDTLMFGSGITIR 155
>gi|88603762|ref|YP_503940.1| flap endonuclease-1 [Methanospirillum hungatei JF-1]
gi|121721338|sp|Q2FNC9.1|FEN_METHJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|88189224|gb|ABD42221.1| flap endonuclease 1 [Methanospirillum hungatei JF-1]
Length = 333
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 15/68 (22%)
Query: 33 CKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTF 92
++L+ LMG+P ++ AP E EAQ A MV G ++D D L F
Sbjct: 136 ARQLIQLMGLPVVD---------------APSEGEAQGAYMVLKGDADYVVSQDYDTLLF 180
Query: 93 GTNILLRQ 100
GT +L+R
Sbjct: 181 GTPVLVRN 188
>gi|224006438|ref|XP_002292179.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
gi|220971821|gb|EED90154.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
Length = 307
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 36/79 (45%), Gaps = 20/79 (25%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG- 93
ELL L GIP++E +P EAEAQCAA+ + G V TED D FG
Sbjct: 23 ELLELCGIPWVE---------------SPSEAEAQCAALEELGLVDGVVTEDSDIFVFGG 67
Query: 94 ----TNILLRQQLSWATFS 108
N QQ A ++
Sbjct: 68 RKVYKNFFNEQQYVEAYYA 86
>gi|189192965|ref|XP_001932821.1| flap structure-specific endonuclease [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978385|gb|EDU45011.1| flap structure-specific endonuclease [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 936
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 61 LAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
LAP EAEA+CA + + G V A +ED+D L FG+ I +R
Sbjct: 117 LAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGITIR 155
>gi|328791064|ref|XP_393585.4| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Apis mellifera]
Length = 1094
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I K R+ + +S E +ELL L GIPY+ +AP EAEAQCA +
Sbjct: 717 IGKLERQGIDISDQIRIEAQELLQLFGIPYL---------------VAPMEAEAQCAYLE 761
Query: 75 KAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 762 QIHLTDGTITDDSDIWLFG 780
>gi|320580410|gb|EFW94633.1| Single-stranded DNA endonuclease [Ogataea parapolymorpha DL-1]
Length = 1011
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+ + K R V+ + + +++LS G+PYI AP EAEAQCA
Sbjct: 713 ESMKKQKRDADEVTVRMILDIQDMLSRFGLPYIT---------------APMEAEAQCAE 757
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLSWATFSMHCWE 113
+++ G V T+D D FG + + + + F + C++
Sbjct: 758 LLRLGLVDGIITDDSDCFLFGGDRVYKNMFNEKNF-VECYQ 797
>gi|229577369|ref|NP_001153363.1| mutagen-sensitive 201 [Nasonia vitripennis]
Length = 1167
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
+ K R+ + ++ E +ELL L G+PYI +AP EAEAQCA +
Sbjct: 760 LGKLERQAIDITDQMRLEAQELLRLFGVPYI---------------VAPMEAEAQCAYLE 804
Query: 75 KAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 805 QIKLTDGTITDDSDIWLFG 823
>gi|380025170|ref|XP_003696351.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Apis florea]
Length = 1095
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 15 IDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMV 74
I K R+ + +S E +ELL L GIPY+ +AP EAEAQCA +
Sbjct: 712 IGKLERQGIDISDQIRIEAQELLKLFGIPYL---------------VAPMEAEAQCAYLE 756
Query: 75 KAGKVYATATEDMDALTFG 93
+ T T+D D FG
Sbjct: 757 QIHLTDGTITDDSDIWLFG 775
>gi|449454486|ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 19/81 (23%)
Query: 19 NRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGK 78
NR+ + VKEC ELL L G+P +E A EAEA CA + + G
Sbjct: 113 NRKFAKC----VKECVELLELFGVPVLE---------------AKGEAEALCAELNQKGF 153
Query: 79 VYATATEDMDALTFGTNILLR 99
V A T D DA FG +++
Sbjct: 154 VDACITADSDAFLFGAKCVIK 174
>gi|156084190|ref|XP_001609578.1| Rad2 endonuclease [Babesia bovis T2Bo]
gi|154796830|gb|EDO06010.1| Rad2 endonuclease, putative [Babesia bovis]
Length = 1002
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 15/75 (20%)
Query: 36 LLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTN 95
LL L G+P+I +AP EAEAQCA + G + ++D D L FG
Sbjct: 692 LLDLFGVPFI---------------VAPSEAEAQCAHLNNTGLCFGVISDDSDTLAFGAK 736
Query: 96 ILLRQQLSWATFSMH 110
+ + S F ++
Sbjct: 737 RVFKNFYSGNVFEVY 751
>gi|395332541|gb|EJF64920.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1217
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 11 DAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEA 66
+ +E++K + +R ++ + + +L L GIPYI AP EA
Sbjct: 783 EIRELNKQKKNAMRDSEDITQQMISQIMIMLRLFGIPYIT---------------APMEA 827
Query: 67 EAQCAAMVKAGKVYATATEDMDALTFGTNILLRQQLS 103
EAQCAA++ G V T+D D FG +L+ +
Sbjct: 828 EAQCAALLSLGLVDGIITDDSDVFLFGGGRVLKNMFN 864
>gi|408381751|ref|ZP_11179299.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
gi|407815682|gb|EKF86252.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
Length = 328
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
KF R R+ V+ K+L+ LMGIPYI+ A E EAQ + MV
Sbjct: 119 KFAVRSSRMFPEIVEGSKKLIKLMGIPYIQ---------------AKGEGEAQASYMVAQ 163
Query: 77 GKVYATATEDMDALTFG 93
G + A++D D + FG
Sbjct: 164 GDAWCVASQDYDCMLFG 180
>gi|348681509|gb|EGZ21325.1| hypothetical protein PHYSODRAFT_455731 [Phytophthora sojae]
Length = 502
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 10 GDAQEIDKFNRRLVR----VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCE 65
GD E+ K R +R ++ V E LL L G+P++ ++P E
Sbjct: 186 GDTLELKKLRSRQLRDTEGITDDMVAEVMALLRLFGVPFL---------------VSPME 230
Query: 66 AEAQCAAMVKAGKVYATATEDMDALTFG-----TNILLRQQL 102
AEAQCAA+ + G V T+D D FG NI Q+
Sbjct: 231 AEAQCAALEQLGLVDGVITDDSDIFPFGGQRVYKNIFHHQKF 272
>gi|338715323|ref|XP_001494708.3| PREDICTED: DNA repair protein complementing XP-G cells [Equus
caballus]
Length = 1190
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 776 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 820
Query: 92 FG 93
FG
Sbjct: 821 FG 822
>gi|195030390|ref|XP_001988051.1| GH10954 [Drosophila grimshawi]
gi|193904051|gb|EDW02918.1| GH10954 [Drosophila grimshawi]
Length = 1183
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 14 EIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAM 73
E ++ +R + +S +C+ELL L GIPYI +AP EAEAQCA +
Sbjct: 776 ERNRQDRMGMSISQRMSNDCQELLRLFGIPYI---------------VAPMEAEAQCAFL 820
Query: 74 VKAGKVYATATEDMDALTFG 93
T T+D D FG
Sbjct: 821 NAVEITNGTITDDSDIWLFG 840
>gi|260825215|ref|XP_002607562.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
gi|229292910|gb|EEN63572.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
Length = 162
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPY++ +P EAEAQCA + ++ + T T+D D
Sbjct: 40 ESQELLRLFGIPYVQ---------------SPTEAEAQCAFLDQSKQTEGTITDDSDVWL 84
Query: 92 FG 93
FG
Sbjct: 85 FG 86
>gi|52549222|gb|AAU83071.1| DNA repair protein [uncultured archaeon GZfos26E7]
Length = 339
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + R+ V + K LL+ MGIP +E A E EAQ A M ++
Sbjct: 119 KYAQATSRLQPEMVADAKSLLTSMGIPVVE---------------AASEGEAQAARMARS 163
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G V ++D D+L FG ++R
Sbjct: 164 GDVRFVGSQDYDSLLFGAPEVVRN 187
>gi|448600910|ref|ZP_21656289.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
gi|445734923|gb|ELZ86479.1| flap endonuclease-1 [Haloferax alexandrinus JCM 10717]
Length = 326
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 15/68 (22%)
Query: 33 CKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTF 92
+ELLSL +P +E AP E EAQ + M + G +ED D L F
Sbjct: 137 SRELLSLFDVPVVE---------------APAEGEAQASYMARTGDADYVGSEDYDTLLF 181
Query: 93 GTNILLRQ 100
G LRQ
Sbjct: 182 GAPYTLRQ 189
>gi|433418201|ref|ZP_20404929.1| flap endonuclease-1 [Haloferax sp. BAB2207]
gi|432199801|gb|ELK55943.1| flap endonuclease-1 [Haloferax sp. BAB2207]
Length = 326
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 15/68 (22%)
Query: 33 CKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTF 92
+ELLSL +P +E AP E EAQ + M + G +ED D L F
Sbjct: 137 SRELLSLFDVPVVE---------------APAEGEAQASYMARTGDADYVGSEDYDTLLF 181
Query: 93 GTNILLRQ 100
G LRQ
Sbjct: 182 GAPYTLRQ 189
>gi|378727189|gb|EHY53648.1| DNA excision repair protein ERCC-5 [Exophiala dermatitidis
NIH/UT8656]
Length = 768
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 62 APCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILLR 99
AP EAEA+CA + K G V A ++D+DA+ FG+++ LR
Sbjct: 118 APGEAEAECAMLQKHGLVDAVMSQDVDAIMFGSSLTLR 155
>gi|62088204|dbj|BAD92549.1| DNA-repair protein complementing XP-G cells variant [Homo sapiens]
Length = 1611
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 1196 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 1240
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 1241 FGARHVYRNFFNKNKF 1256
>gi|60811379|gb|AAX36171.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
Length = 1187
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|324715041|ref|NP_001191354.1| BIVM-ERCC5 protein [Homo sapiens]
Length = 1640
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 1225 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 1269
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 1270 FGARHVYRNFFNKNKF 1285
>gi|392595001|gb|EIW84325.1| hypothetical protein CONPUDRAFT_100293 [Coniophora puteana RWD-64-598
SS2]
Length = 1485
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
+++ + + +L L GIPYI AP EAEAQCA +V+ G V T
Sbjct: 949 ITTQMISQIMLMLRLFGIPYIT---------------APMEAEAQCAELVQLGLVEGVIT 993
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 994 DDSDVFLFG 1002
>gi|426375915|ref|XP_004054761.1| PREDICTED: DNA repair protein complementing XP-G cells [Gorilla
gorilla gorilla]
Length = 1186
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|390364842|ref|XP_790336.3| PREDICTED: DNA repair protein complementing XP-G cells-like
[Strongylocentrotus purpuratus]
Length = 375
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+E K ++ ++ + KE+L GIPYIE +P EAEAQCA
Sbjct: 88 KERRKQQKKSYSITDTMYADSKEMLQCFGIPYIE---------------SPQEAEAQCAF 132
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQQLS 103
+ + T T+D D FG + R S
Sbjct: 133 LDLTNQTEGTITDDGDIWLFGGRRVFRHFFS 163
>gi|330509049|ref|YP_004385477.1| FLAP endonuclease [Methanosaeta concilii GP6]
gi|328929857|gb|AEB69659.1| FLAP endonuclease [Methanosaeta concilii GP6]
Length = 339
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K+ + R++S +++ + L+ MG+P I+ AP E EAQ A M
Sbjct: 120 KYAQAASRINSEIIEDGRRLILAMGLPVIQ---------------APSEGEAQAAYMAAR 164
Query: 77 GKVYATATEDMDALTFGTNILLRQ 100
G V ++D D+L FG +++R
Sbjct: 165 GDVDYAGSQDYDSLLFGAPLVVRN 188
>gi|410215558|gb|JAA04998.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410261564|gb|JAA18748.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410301776|gb|JAA29488.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410335601|gb|JAA36747.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
Length = 1186
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|33187721|gb|AAP97715.1|AF462447_1 excision repair protein ERCC5 [Homo sapiens]
gi|306742|gb|AAC37533.1| excision repair protein [Homo sapiens]
Length = 1186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|51988900|ref|NP_000114.2| DNA repair protein complementing XP-G cells [Homo sapiens]
gi|21619256|gb|AAH31522.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|24079971|gb|AAN46091.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|61364768|gb|AAX42600.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
gi|123981830|gb|ABM82744.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
gi|123996661|gb|ABM85932.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
Length = 1186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|298111|emb|CAA49598.1| XP-G factor [Homo sapiens]
gi|119629476|gb|EAX09071.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)), isoform
CRA_a [Homo sapiens]
Length = 1186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|332841607|ref|XP_003314253.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Pan troglodytes]
Length = 1186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|13541391|ref|NP_111079.1| flap endonuclease-1 [Thermoplasma volcanium GSS1]
gi|28380020|sp|Q97B98.1|FEN_THEVO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|14324774|dbj|BAB59701.1| FLAP endonuclease-1 [Thermoplasma volcanium GSS1]
Length = 335
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+ + ++ R+ ++ V + KELL+ MGIPY++ AP E EAQ +
Sbjct: 114 ENLKQYYSRINYITPQIVNDTKELLTYMGIPYVD---------------APSEGEAQASY 158
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M + ++D D L FG +LR
Sbjct: 159 MTRK-DADGVISQDYDCLLFGAKKILRN 185
>gi|205371791|sp|P28715.3|ERCC5_HUMAN RecName: Full=DNA repair protein complementing XP-G cells; AltName:
Full=DNA excision repair protein ERCC-5; AltName:
Full=Xeroderma pigmentosum group G-complementing protein
gi|9587154|gb|AAF89179.1| xeroderma pigmentosum complementation group G protein splice
variant [Homo sapiens]
Length = 1186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 771 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 815
Query: 92 FGTNILLRQQLSWATF 107
FG + R + F
Sbjct: 816 FGARHVYRNFFNKNKF 831
>gi|410076602|ref|XP_003955883.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
gi|372462466|emb|CCF56748.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
Length = 988
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 30 VKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDA 89
+ + +ELLS GIP+ V AP EAEAQCA ++ G V T+D D
Sbjct: 728 ITDVQELLSRFGIPF---------------VTAPMEAEAQCAELIALGLVDGIITDDSDV 772
Query: 90 LTFG 93
FG
Sbjct: 773 FLFG 776
>gi|344228751|gb|EGV60637.1| hypothetical protein CANTEDRAFT_132346 [Candida tenuis ATCC 10573]
Length = 960
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 17 KFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKA 76
K R V+ + + +ELL GIP++ AP EAEAQC ++K
Sbjct: 685 KQKRDSEEVTQAMINDVQELLRRFGIPFLT---------------APMEAEAQCVELLKL 729
Query: 77 GKVYATATEDMDALTFGTNILLRQQLSWATFSMHCW 112
G V T+D D FG + + + + F + C+
Sbjct: 730 GLVDGIVTDDSDTFLFGGDRVYKNMFNQKQF-VECY 764
>gi|366994113|ref|XP_003676821.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
gi|342302688|emb|CCC70465.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
Length = 1000
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 25 VSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATAT 84
V+ +++ +ELLS G+PYI AP EAEAQCA +++ V T
Sbjct: 736 VTPEMIQDVQELLSRFGVPYIT---------------APMEAEAQCAELLQLKLVDGVVT 780
Query: 85 EDMDALTFG 93
+D D FG
Sbjct: 781 DDSDVFLFG 789
>gi|426236893|ref|XP_004012399.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing
XP-G cells [Ovis aries]
Length = 1200
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 779 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 823
Query: 92 FG 93
FG
Sbjct: 824 FG 825
>gi|388583607|gb|EIM23908.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 1046
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E ++LL GIPYI AP EAEAQCA + + V A T+D D
Sbjct: 724 EIQKLLRAFGIPYIT---------------APMEAEAQCAKLAQMNLVDAVITDDSDVFL 768
Query: 92 FGTNILLRQQLSWATFSMHCW 112
FG I+ + + F + C+
Sbjct: 769 FGAPIVYKNMFNDRQF-VECY 788
>gi|195559286|ref|XP_002077347.1| GD20054 [Drosophila simulans]
gi|194202449|gb|EDX16025.1| GD20054 [Drosophila simulans]
Length = 259
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
+C+E L L GIPYI +AP EAEAQCA + + T T+D D
Sbjct: 12 DCQEQLRLFGIPYI---------------VAPMEAEAQCAFLNATDLTHGTITDDSDIWL 56
Query: 92 FGTNILLRQ 100
FG + +
Sbjct: 57 FGGRTVYKN 65
>gi|301758086|ref|XP_002914899.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Ailuropoda melanoleuca]
Length = 1644
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 1231 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 1275
Query: 92 FG 93
FG
Sbjct: 1276 FG 1277
>gi|302665075|ref|XP_003024151.1| Rad2-like endonuclease, putative [Trichophyton verrucosum HKI 0517]
gi|291188195|gb|EFE43540.1| Rad2-like endonuclease, putative [Trichophyton verrucosum HKI 0517]
Length = 768
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 45 IEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILL 98
IE+SR L ++ +AP EAEA+CA + +AG V A + D+DAL FG+ + L
Sbjct: 101 IELSRKLIELFSYPCHMAPGEAEAECAKLQQAGVVDAVMSNDVDALMFGSKVTL 154
>gi|389595061|ref|XP_003722753.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
gi|323363981|emb|CBZ12987.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
Length = 931
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 15/65 (23%)
Query: 35 ELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGT 94
ELL G+PY VL+P EA+AQCA + + G V A TED D L G
Sbjct: 645 ELLDCCGVPY---------------VLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGA 689
Query: 95 NILLR 99
+LR
Sbjct: 690 TRVLR 694
>gi|389749913|gb|EIM91084.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1350
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 15/58 (25%)
Query: 36 LLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFG 93
+L L GIPYI AP EAEAQCA +V+ G V T+D D FG
Sbjct: 913 MLRLFGIPYIT---------------APMEAEAQCATLVQLGLVEGIITDDSDVFLFG 955
>gi|397524400|ref|XP_003832181.1| PREDICTED: DNA repair protein complementing XP-G cells [Pan paniscus]
Length = 1754
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 15/68 (22%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYI+ AP EAEAQCA + + T T+D D
Sbjct: 1339 ESQELLRLFGIPYIQ---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 1383
Query: 92 FGTNILLR 99
FG + R
Sbjct: 1384 FGARHVYR 1391
>gi|326474338|gb|EGD98347.1| hypothetical protein TESG_05726 [Trichophyton tonsurans CBS 112818]
Length = 778
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 45 IEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILL 98
IE+SR L ++ +AP EAEA+CA + +AG V A + D+DAL FG+ + L
Sbjct: 101 IELSRKLIELFSYPCHMAPGEAEAECAKLQQAGVVDAVMSNDVDALMFGSKVTL 154
>gi|46117088|ref|XP_384562.1| hypothetical protein FG04386.1 [Gibberella zeae PH-1]
Length = 790
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 5 LFLLTGDAQEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPC 64
+F+ G + K N++ R SS + K L+ L G + AP
Sbjct: 75 IFVFDGPYKPALKRNKQSSRGSSFANAQAKRLIRLFGCNMHD---------------APG 119
Query: 65 EAEAQCAAMVKAGKVYATATEDMDALTFGTNILLRQ 100
EAEA+CA + + G V TED+DAL FG +LR+
Sbjct: 120 EAEAECALLQQHGIVDMVLTEDVDALMFGCTKMLRK 155
>gi|440901361|gb|ELR52322.1| DNA repair protein complementing XP-G cells [Bos grunniens mutus]
Length = 1202
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 788 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 832
Query: 92 FG 93
FG
Sbjct: 833 FG 834
>gi|118596596|dbj|BAF37957.1| flap endonuclease-1 [Thermoplasma sp. S01]
Length = 336
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 16/88 (18%)
Query: 13 QEIDKFNRRLVRVSSVHVKECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAA 72
+++ ++ R+ ++ V + K+LL MGIPY++ AP E EAQ +
Sbjct: 114 EDLRQYYSRINYITPQIVNDTKKLLDYMGIPYVD---------------APSEGEAQASY 158
Query: 73 MVKAGKVYATATEDMDALTFGTNILLRQ 100
M + V ++D D L FG +LR
Sbjct: 159 MTRKN-VDGVISQDYDCLLFGARKVLRN 185
>gi|359322522|ref|XP_003639860.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Canis
lupus familiaris]
Length = 1185
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 772 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 816
Query: 92 FG 93
FG
Sbjct: 817 FG 818
>gi|326482509|gb|EGE06519.1| hypothetical protein TEQG_05519 [Trichophyton equinum CBS 127.97]
Length = 768
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 45 IEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILL 98
IE+SR L ++ +AP EAEA+CA + +AG V A + D+DAL FG+ + L
Sbjct: 101 IELSRKLIELFSYPCHMAPGEAEAECAKLQQAGVVDAVMSNDVDALMFGSKVTL 154
>gi|410947676|ref|XP_003980569.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing
XP-G cells [Felis catus]
Length = 1128
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 715 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 759
Query: 92 FG 93
FG
Sbjct: 760 FG 761
>gi|327307022|ref|XP_003238202.1| hypothetical protein TERG_00194 [Trichophyton rubrum CBS 118892]
gi|326458458|gb|EGD83911.1| hypothetical protein TERG_00194 [Trichophyton rubrum CBS 118892]
Length = 768
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 45 IEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILL 98
IE+SR L ++ +AP EAEA+CA + +AG V A + D+DAL FG+ + L
Sbjct: 101 IELSRKLIELFSYPCHMAPGEAEAECAKLQQAGVVDAVMSNDVDALMFGSKVTL 154
>gi|281350378|gb|EFB25962.1| hypothetical protein PANDA_002828 [Ailuropoda melanoleuca]
Length = 1192
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 15/62 (24%)
Query: 32 ECKELLSLMGIPYIEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALT 91
E +ELL L GIPYIE AP EAEAQCA + + T T+D D
Sbjct: 779 ESQELLRLFGIPYIE---------------APMEAEAQCAILDLTDQTSGTITDDSDIWL 823
Query: 92 FG 93
FG
Sbjct: 824 FG 825
>gi|302508023|ref|XP_003015972.1| Rad2-like endonuclease, putative [Arthroderma benhamiae CBS 112371]
gi|291179541|gb|EFE35327.1| Rad2-like endonuclease, putative [Arthroderma benhamiae CBS 112371]
Length = 821
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 45 IEVSRSPRLLPNFLGVLAPCEAEAQCAAMVKAGKVYATATEDMDALTFGTNILL 98
IE+SR L ++ +AP EAEA+CA + +AG V A + D+DAL FG+ + L
Sbjct: 154 IELSRKLIELFSYPCHMAPGEAEAECAKLQQAGVVDAVMSNDVDALMFGSKVTL 207
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,568,009,609
Number of Sequences: 23463169
Number of extensions: 50260983
Number of successful extensions: 152157
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 358
Number of HSP's that attempted gapping in prelim test: 149919
Number of HSP's gapped (non-prelim): 1535
length of query: 113
length of database: 8,064,228,071
effective HSP length: 81
effective length of query: 32
effective length of database: 6,163,711,382
effective search space: 197238764224
effective search space used: 197238764224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)