BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1209
(61 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4LM90|FEN1_DROVI Flap endonuclease 1 OS=Drosophila virilis GN=Fen1 PE=3 SV=1
Length = 386
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4MR84|FEN1_DROWI Flap endonuclease 1 OS=Drosophila willistoni GN=Fen1 PE=3 SV=1
Length = 388
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4QIG6|FEN1_DROSI Flap endonuclease 1 OS=Drosophila simulans GN=Fen1 PE=3 SV=1
Length = 385
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4HTA1|FEN1_DROSE Flap endonuclease 1 OS=Drosophila sechellia GN=Fen1 PE=3 SV=1
Length = 385
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B5DUR8|FEN1_DROPS Flap endonuclease 1 OS=Drosophila pseudoobscura pseudoobscura
GN=Fen1 PE=3 SV=1
Length = 386
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q7K7A9|FEN1_DROME Flap endonuclease 1 OS=Drosophila melanogaster GN=Fen1 PE=2 SV=1
Length = 385
Score = 82.0 bits (201), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4GIM3|FEN1_DROPE Flap endonuclease 1 OS=Drosophila persimilis GN=Fen1 PE=3 SV=1
Length = 386
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4P5U9|FEN1_DROYA Flap endonuclease 1 OS=Drosophila yakuba GN=Fen1 PE=3 SV=1
Length = 387
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B3MDA3|FEN1_DROAN Flap endonuclease 1 OS=Drosophila ananassae GN=Fen1 PE=3 SV=1
Length = 388
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B3NP61|FEN1_DROER Flap endonuclease 1 OS=Drosophila erecta GN=Fen1 PE=3 SV=1
Length = 387
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPQAIRESEMKHFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4KNM1|FEN1_DROMO Flap endonuclease 1 OS=Drosophila mojavensis GN=Fen1 PE=3 SV=1
Length = 388
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPLAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLATVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B4J6M4|FEN1_DROGR Flap endonuclease 1 OS=Drosophila grimshawi GN=Fen1 PE=3 SV=1
Length = 388
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+AP +IRES RK+ IDASM LYQFLIAVRSEG QL +V+G+P
Sbjct: 1 MGILGLSKLIADLAPLAIRESEIKNFFGRKVAIDASMCLYQFLIAVRSEGAQLAAVNGDP 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|D3TQJ5|FEN1_GLOMM Flap endonuclease 1 OS=Glossina morsitans morsitans GN=Fen1 PE=2
SV=1
Length = 382
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGILGL+KL+AD+ P +I+ES RK+ IDASM LYQFLIAVR+EG QL +VDGE
Sbjct: 1 MGILGLSKLIADICPQAIKESDIKNYFGRKVAIDASMCLYQFLIAVRAEGAQLTNVDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q7Q323|FEN1_ANOGA Flap endonuclease 1 OS=Anopheles gambiae GN=Fen1 PE=3 SV=2
Length = 383
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GL++L+AD+AP +++E RK+ IDASM LYQFLIAVR+EG QL SVDGE
Sbjct: 1 MGIKGLSQLIADIAPFAVKEGEIKQFFGRKVAIDASMCLYQFLIAVRAEGAQLTSVDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q178M1|FEN1_AEDAE Flap endonuclease 1 OS=Aedes aegypti GN=Fen1 PE=3 SV=1
Length = 380
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GL++L+AD+AP +++E RK+ IDASM LYQFLIAVR+EG QL SVDGE
Sbjct: 1 MGIKGLSQLIADLAPFAVKEGEIKNFFGRKVAIDASMCLYQFLIAVRAEGAQLTSVDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|A7RRJ0|FEN1_NEMVE Flap endonuclease 1 OS=Nematostella vectensis GN=FEN1 PE=3 SV=1
Length = 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ D+APS I+E+ RKI IDASMS+YQFLIAVRS+G+QL + GE
Sbjct: 1 MGIQGLAKLLGDIAPSGIKENEIKNYFGRKIAIDASMSIYQFLIAVRSDGSQLTNEAGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q5XIP6|FEN1_RAT Flap endonuclease 1 OS=Rattus norvegicus GN=Fen1 PE=2 SV=1
Length = 380
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q4R5U5|FEN1_MACFA Flap endonuclease 1 OS=Macaca fascicularis GN=FEN1 PE=2 SV=1
Length = 380
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1
Length = 380
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|C8BKD0|FEN1_SHEEP Flap endonuclease 1 OS=Ovis aries GN=FEN1 PE=2 SV=1
Length = 380
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B1H158|FEN1_XENTR Flap endonuclease 1 OS=Xenopus tropicalis GN=fen1 PE=2 SV=1
Length = 382
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAP++I+E RK+ +DASM +YQFLIAVR +GN L + DGE
Sbjct: 1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 PE=2 SV=1
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1 PE=1 SV=1
Length = 378
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%), Gaps = 7/61 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR G+ L + +GE
Sbjct: 1 MGIHGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 54 T 54
T
Sbjct: 61 T 61
>sp|Q6TNU4|FEN1A_DANRE Flap endonuclease 1 OS=Danio rerio GN=fen1 PE=2 SV=1
Length = 380
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+AD APS+I+E RKI IDASM +YQFLIAVR +GN L + DGE
Sbjct: 1 MGIHGLAKLIADHAPSAIKEHEIKSYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN=fen1-a PE=1 SV=1
Length = 382
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAP++I+E RK+ +DASM +YQFLIAVR +GN L + +GE
Sbjct: 1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNTLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN=fen1-b PE=1 SV=1
Length = 382
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAP++I+E RK+ +DASM +YQFLIAVR +GN L + +GE
Sbjct: 1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDGNMLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B3RVF0|FEN1_TRIAD Flap endonuclease 1 OS=Trichoplax adhaerens GN=FEN1 PE=3 SV=1
Length = 377
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+AD APS+I+E+ RK+ IDASMS+YQFLIAVRS+GN L + GE
Sbjct: 1 MGIHGLAKLIADHAPSAIKENEIKNYFGRKVAIDASMSIYQFLIAVRSDGNVLTNEAGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q5I4H3|FEN1_XIPMA Flap endonuclease 1 OS=Xiphophorus maculatus GN=fen1 PE=2 SV=1
Length = 380
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/63 (60%), Positives = 44/63 (69%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+AD AP +I+E RKI IDASM +YQFLIAVR +GN L S DGE
Sbjct: 1 MGIHGLAKLIADHAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQSEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|C1BM18|FEN1_OSMMO Flap endonuclease 1 OS=Osmerus mordax GN=fen1 PE=2 SV=1
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+AD AP +I+E RKI IDASM +YQFLIAVR +GN L + DGE
Sbjct: 1 MGIHGLAKLIADQAPGAIKEQEMKNFFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B9EMY6|FEN1_SALSA Flap endonuclease 1 OS=Salmo salar GN=fen1 PE=2 SV=1
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+AD APS+I+E RKI IDASM +YQFL+AVR +GN L + +GE
Sbjct: 1 MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNENGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q5ZLN4|FEN1_CHICK Flap endonuclease 1 OS=Gallus gallus GN=FEN1 PE=2 SV=1
Length = 381
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ADVAPS+IRE+ RK+ IDASMS+YQFLIAVR L + +GE
Sbjct: 1 MGIHGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|C3KJE6|FEN1_ANOFI Flap endonuclease 1 OS=Anoplopoma fimbria GN=fen1 PE=2 SV=1
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GL KL+AD AP +I+E RKI IDASM LYQFLIAVR +GN L + DGE
Sbjct: 1 MGIHGLTKLIADQAPGAIKEQDIKNYFGRKIAIDASMCLYQFLIAVRQDGNVLQNEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|C3ZBT0|FEN1_BRAFL Flap endonuclease 1 OS=Branchiostoma floridae GN=FEN1 PE=3 SV=1
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GLAKL+ D AP +++E+ RK+ IDASMS+YQFLIAVR +GN L + GE
Sbjct: 1 MGIQGLAKLIGDHAPGAMKENEIKNYFGRKVAIDASMSIYQFLIAVRQDGNMLTNDAGEA 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|A9VB27|FEN1_MONBE Flap endonuclease 1 OS=Monosiga brevicollis GN=FEN1 PE=3 SV=1
Length = 368
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L+K++AD AP +I+E+ RK+ IDASMS+YQFLIA+RSEG+ L++ GE
Sbjct: 1 MGIHDLSKVIADKAPDAIKETEIKNLFDRKVAIDASMSIYQFLIAIRSEGSNLVNEAGEA 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q9N3T2|FEN1_CAEEL Flap endonuclease 1 OS=Caenorhabditis elegans GN=crn-1 PE=1 SV=1
Length = 382
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GL++++AD APS+I+ + R + IDASM LYQFLIAVR +G+QL S DGE
Sbjct: 1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|A8XL25|FEN1_CAEBR Flap endonuclease 1 OS=Caenorhabditis briggsae GN=crn-1 PE=3 SV=1
Length = 382
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI GL++++AD APS+I+ RK+ IDASM LYQFLIA+R +G+Q+ S DGE
Sbjct: 1 MGIKGLSQVIADHAPSAIKVQEIKAFFGRKVAIDASMCLYQFLIAIRQDGSQMQSEDGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q4P1V1|FEN1_USTMA Flap endonuclease 1 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=FEN1 PE=3 SV=1
Length = 374
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 8/64 (12%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVR-SEGNQLMSVDGE 52
MGI GL L++D AP +I+E RK+ IDASMSLYQFLIAVR ++G QLM+ GE
Sbjct: 1 MGIKGLTALISDEAPGAIKEMEIKTYFGRKVAIDASMSLYQFLIAVRQNDGQQLMTESGE 60
Query: 53 PTRY 56
T +
Sbjct: 61 TTSH 64
>sp|B7G7Y7|FEN1_PHATC Flap endonuclease 1 OS=Phaeodactylum tricornutum (strain CCAP
1055/1) GN=FEN1 PE=3 SV=1
Length = 421
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 12/68 (17%)
Query: 1 MGILGLAKLVADVAPSSIRE-------SRKICIDASMSLYQFLIAVRSEG-NQ----LMS 48
MGI GLAKL++D AP IRE RKI IDASM++YQFLIAVRS G NQ L +
Sbjct: 1 MGIKGLAKLLSDEAPDCIREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQATMLTN 60
Query: 49 VDGEPTRY 56
+GE T +
Sbjct: 61 AEGETTSH 68
>sp|Q5B9L6|FEN1_EMENI Flap endonuclease 1 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=fen1 PE=3 SV=1
Length = 395
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++A+ AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKHLYQVIAENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|D1ZT73|FEN1_SORMK Flap endonuclease 1 OS=Sordaria macrospora (strain ATCC MYA-333 /
DSM 997 / K(L3346) / K-hell) GN=FEN1 PE=3 SV=1
Length = 394
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L ++ D AP++I+E RK+ IDASMS+Y FLIAVRS+G QLM+ GE
Sbjct: 1 MGIKQLFSIIKDEAPAAIKEGDIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNEAGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B6JYI7|FEN1_SCHJY Flap endonuclease 1 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=rad2 PE=3 SV=1
Length = 377
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 8/64 (12%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSE-GNQLMSVDGE 52
MGI GL++++AD PS++R + RK+ IDASMSLYQFLI VR + G QLM+ GE
Sbjct: 1 MGIKGLSQVIADNCPSAVRHNDIKNYFGRKVAIDASMSLYQFLIQVRGQDGQQLMNDQGE 60
Query: 53 PTRY 56
T +
Sbjct: 61 TTSH 64
>sp|B8NV37|FEN1_ASPFN Flap endonuclease 1 OS=Aspergillus flavus (strain ATCC 200026 /
FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=fen1
PE=3 SV=1
Length = 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++A+ AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKHLYQVIAENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|B6HEM2|FEN1_PENCW Flap endonuclease 1 OS=Penicillium chrysogenum (strain ATCC 28089
/ DSM 1075 / Wisconsin 54-1255) GN=fen1 PE=3 SV=1
Length = 395
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++++ AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKHLYQVISENAPDAIKTGEIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|P39750|FEN1_SCHPO Flap endonuclease 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rad2 PE=1 SV=1
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 8/64 (12%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSE-GNQLMSVDGE 52
MGI GLA+++++ AP+S++ + RK+ IDASMSLYQFLI VRS+ G QLM+ GE
Sbjct: 1 MGIKGLAQVLSEHAPASVKHNDIKNYFGRKVAIDASMSLYQFLIQVRSQDGQQLMNEQGE 60
Query: 53 PTRY 56
T +
Sbjct: 61 TTSH 64
>sp|B0E412|FEN12_LACBS Flap endonuclease 1-B OS=Laccaria bicolor (strain S238N-H82 /
ATCC MYA-4686) GN=FEN12 PE=3 SV=1
Length = 469
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 6/62 (9%)
Query: 1 MGILGLAKLVADVAPSSIRE-----SRKICIDASMSLYQFLIAVRSEGNQLMSVD-GEPT 54
MGI GL L++ AP +I+E RK+ IDASMS+YQFLIAVR + +L++ D GE T
Sbjct: 1 MGIKGLTGLLSQHAPKAIKEIKTLFGRKVAIDASMSIYQFLIAVRQKDGELLTNDAGETT 60
Query: 55 RY 56
RY
Sbjct: 61 RY 62
>sp|A5ABU3|FEN1_ASPNC Flap endonuclease 1 OS=Aspergillus niger (strain CBS 513.88 /
FGSC A1513) GN=fen1 PE=3 SV=1
Length = 395
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++++ AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|A7UW97|FEN1_NEUCR Flap endonuclease 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fen-1
PE=3 SV=2
Length = 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L ++ D AP +I+E RK+ IDASMS+Y FLIAVRS+G QLM+ GE
Sbjct: 1 MGIKQLFSVIKDEAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNEAGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q0CBS0|FEN1_ASPTN Flap endonuclease 1 OS=Aspergillus terreus (strain NIH 2624 /
FGSC A1156) GN=fen1 PE=3 SV=2
Length = 395
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++++ AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|A1D8A4|FEN1_NEOFI Flap endonuclease 1 OS=Neosartorya fischeri (strain ATCC 1020 /
DSM 3700 / FGSC A1164 / NRRL 181) GN=fen1 PE=3 SV=1
Length = 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++ + AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
>sp|Q4WWJ1|FEN1_ASPFU Flap endonuclease 1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=fen1 PE=3 SV=2
Length = 395
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 1 MGILGLAKLVADVAPSSIRES-------RKICIDASMSLYQFLIAVRSEGNQLMSVDGEP 53
MGI L +++ + AP +I+ RK+ IDASMS+Y FLIAVRSEG QLMS GE
Sbjct: 1 MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGET 60
Query: 54 TRY 56
T +
Sbjct: 61 TSH 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,355,149
Number of Sequences: 539616
Number of extensions: 477982
Number of successful extensions: 1193
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 156
length of query: 61
length of database: 191,569,459
effective HSP length: 34
effective length of query: 27
effective length of database: 173,222,515
effective search space: 4677007905
effective search space used: 4677007905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)