Query psy12090
Match_columns 371
No_of_seqs 178 out of 1364
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 18:26:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12090.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12090hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_B Tubulin beta chain; alp 100.0 9E-109 3E-113 821.9 21.5 360 1-360 1-435 (445)
2 3ryc_A Tubulin alpha chain; al 100.0 2E-108 7E-113 820.4 21.7 362 1-362 1-447 (451)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 2.3E-97 8E-102 748.2 24.9 357 1-358 2-446 (475)
4 2btq_B Tubulin btubb; structur 100.0 2.5E-96 8E-101 734.7 17.6 347 1-350 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 4.4E-95 1.5E-99 732.6 20.6 350 1-354 3-434 (473)
6 2r75_1 Cell division protein F 100.0 1.1E-37 3.8E-42 302.2 7.1 235 3-297 9-312 (338)
7 1w5f_A Cell division protein F 100.0 1.7E-37 6E-42 301.8 8.0 195 1-244 21-215 (353)
8 1ofu_A FTSZ, cell division pro 100.0 7.1E-37 2.4E-41 294.7 9.9 188 3-244 13-205 (320)
9 2vap_A FTSZ, cell division pro 100.0 4.2E-37 1.4E-41 299.8 7.8 192 3-244 39-230 (364)
10 1rq2_A Cell division protein F 100.0 2.4E-37 8.4E-42 302.9 5.3 240 2-296 12-314 (382)
11 2vaw_A FTSZ, cell division pro 100.0 1.2E-36 4E-41 299.2 9.4 235 2-296 12-315 (394)
12 2vxy_A FTSZ, cell division pro 100.0 1.6E-36 5.4E-41 297.2 9.6 239 2-295 12-313 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 5.4E-33 1.8E-37 271.8 10.9 214 4-255 45-294 (427)
14 3v3t_A Cell division GTPase FT 100.0 2.9E-31 9.8E-36 255.3 10.6 193 4-255 7-207 (360)
15 4dxd_A Cell division protein F 100.0 3.5E-30 1.2E-34 250.1 3.8 203 4-255 20-224 (396)
16 4ei7_A Plasmid replication pro 99.7 1.3E-18 4.5E-23 171.4 8.3 199 4-240 18-223 (389)
17 3r4v_A Putative uncharacterize 99.4 1E-12 3.5E-17 122.2 10.1 251 3-318 4-293 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.3 0.00018 6E-09 46.0 3.4 26 331-356 1-26 (36)
19 3bed_A PTS system, IIA compone 76.5 3.6 0.00012 33.8 5.2 30 113-143 45-74 (142)
20 1pdo_A Mannose permease; phosp 72.1 7 0.00024 31.7 5.9 31 113-143 41-71 (135)
21 3ipr_A PTS system, IIA compone 60.4 13 0.00045 30.7 5.4 31 113-143 41-71 (150)
22 3lfh_A Manxa, phosphotransfera 58.6 6.3 0.00021 32.6 3.0 32 113-144 43-75 (144)
23 3g7n_A Lipase; hydrolase fold, 54.0 8.3 0.00028 35.0 3.3 71 102-177 96-166 (258)
24 3mtq_A Putative phosphoenolpyr 51.2 7 0.00024 33.0 2.2 30 114-143 61-90 (159)
25 3gx1_A LIN1832 protein; APC633 51.1 19 0.00064 29.1 4.7 39 112-152 43-81 (130)
26 2nx2_A Hypothetical protein YP 49.4 57 0.002 27.7 7.8 83 114-203 26-110 (181)
27 3uue_A LIP1, secretory lipase 44.7 17 0.00057 33.3 3.8 71 102-177 110-180 (279)
28 2p10_A MLL9387 protein; putati 39.5 11 0.00039 34.7 1.8 36 113-156 13-48 (286)
29 3o0d_A YALI0A20350P, triacylgl 37.7 16 0.00055 33.9 2.5 68 103-177 127-194 (301)
30 3ct6_A PTS-dependent dihydroxy 36.4 11 0.00037 30.6 1.0 27 115-143 44-70 (131)
31 3b48_A Uncharacterized protein 35.7 14 0.00047 30.0 1.5 28 115-143 49-76 (135)
32 3f1i_H Hepatocyte growth facto 35.5 25 0.00086 26.9 2.8 53 293-350 30-91 (98)
33 2ful_A EIF-5, eukaryotic trans 34.8 16 0.00054 31.3 1.8 50 301-350 106-160 (177)
34 3gdw_A Sigma-54 interaction do 34.3 29 0.001 28.2 3.4 37 113-151 44-82 (139)
35 2wlt_A L-asparaginase; hydrola 34.2 46 0.0016 31.3 5.1 96 108-208 65-161 (332)
36 1tia_A Lipase; hydrolase(carbo 31.8 31 0.0011 31.3 3.4 53 102-158 109-161 (279)
37 1uwc_A Feruloyl esterase A; hy 30.4 22 0.00076 32.0 2.2 52 102-157 97-148 (261)
38 1tib_A Lipase; hydrolase(carbo 28.5 22 0.00075 32.1 1.8 53 102-158 110-162 (269)
39 3ngm_A Extracellular lipase; s 28.4 29 0.00099 32.5 2.6 62 102-167 108-169 (319)
40 1o7j_A L-asparaginase; atomic 27.4 76 0.0026 29.7 5.4 96 108-208 65-161 (327)
41 2aot_A HMT, histamine N-methyl 27.0 1.2E+02 0.0041 27.0 6.6 55 118-173 38-92 (292)
42 3p9c_A Caffeic acid O-methyltr 26.5 75 0.0026 29.7 5.3 45 120-169 189-233 (364)
43 3reo_A (ISO)eugenol O-methyltr 25.5 79 0.0027 29.6 5.2 45 120-169 191-235 (368)
44 1k2d_P MBP peptide, myelin bas 24.7 17 0.00059 20.3 0.2 8 142-149 16-23 (26)
45 1wsa_A Asparaginase, asparagin 24.6 83 0.0029 29.4 5.1 96 108-208 63-159 (330)
46 1zq1_A Glutamyl-tRNA(Gln) amid 22.4 1E+02 0.0035 30.2 5.3 91 108-206 149-240 (438)
47 1tgl_A Triacyl-glycerol acylhy 21.9 75 0.0026 28.4 4.1 52 100-155 106-157 (269)
48 2him_A L-asparaginase 1; hydro 21.3 1.8E+02 0.0063 27.4 6.8 93 108-208 83-176 (358)
49 1nns_A L-asparaginase II; amid 21.0 1.2E+02 0.0041 28.2 5.4 94 108-208 61-155 (326)
50 2d6f_A Glutamyl-tRNA(Gln) amid 20.8 1.3E+02 0.0046 29.3 5.8 90 108-206 148-238 (435)
51 2plg_A TLL0839 protein; hypoth 20.7 82 0.0028 26.5 3.7 59 297-355 86-153 (163)
52 1agx_A Glutaminase-asparaginas 20.3 81 0.0028 29.5 4.0 75 108-187 62-137 (331)
53 3kl4_B DPAP B, YSCV, signal pe 20.3 16 0.00054 22.6 -0.6 10 142-151 4-13 (42)
54 3o38_A Short chain dehydrogena 20.2 45 0.0015 29.3 2.1 20 139-158 27-46 (266)
No 1
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=8.9e-109 Score=821.89 Aligned_cols=360 Identities=89% Similarity=1.433 Sum_probs=348.3
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCC
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGP 80 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~ 80 (371)
|||||+||+||||||||.+||+++|+||+|+++|.+..+.+.+.+++++||+|+..++|+||||||||||+||+++++++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 99999999999999999999999999999999999987777777899999999999999999999999999999999999
Q ss_pred CCccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCC
Q psy12090 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYP 160 (371)
Q Consensus 81 ~~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp 160 (371)
++.+|+|++++++++|+|||||+|||+.|+++.++++|+||+++|.||.||||+++||+|||||||+|+.|++.|+++||
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~ 160 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCT
T ss_pred ccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCcccc
Q psy12090 161 DRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCL 240 (371)
Q Consensus 161 ~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 240 (371)
++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+++
T Consensus 161 kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~sl 240 (445)
T 3ryc_B 161 DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240 (445)
T ss_dssp TSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcccc
Confidence 99999999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC---------------------------------------------------------------------------C
Q psy12090 241 RFPG---------------------------------------------------------------------------R 245 (371)
Q Consensus 241 rf~~---------------------------------------------------------------------------~ 245 (371)
|||| +
T Consensus 241 Rf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~ 320 (445)
T 3ryc_B 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGR 320 (445)
T ss_dssp HSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEES
T ss_pred ccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecC
Confidence 9999 6
Q ss_pred CChHHHHHHHHHhhhcccccceeccCCCccceecCCCCCCccceeEEeccchHHHHHHHHHHHhHhhhcccccceecccc
Q psy12090 246 MSMKEVDEQMLNIQNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGNTTAIQELFRRISDQFDSMYKRKAFLHWYLG 325 (371)
Q Consensus 246 ~~~~~i~~~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~krAflH~Y~~ 325 (371)
++++++++++.+++.+++.+|++|+|+++|+++|++||.+.++++++|+|+|+|.++|+++.+||++||+||||||||++
T Consensus 321 v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~~ 400 (445)
T 3ryc_B 321 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 400 (445)
T ss_dssp CCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHT
T ss_pred CChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhhc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy12090 326 EGMDEMEFTEAASNVLDLISEYQQYQEAAVDDEGG 360 (371)
Q Consensus 326 ~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~~~~~~ 360 (371)
|||||+||.||+++|++|+++|+++.....|++++
T Consensus 401 eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~ 435 (445)
T 3ryc_B 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGE 435 (445)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC---
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence 99999999999999999999999998887665443
No 2
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=2.1e-108 Score=820.42 Aligned_cols=362 Identities=43% Similarity=0.796 Sum_probs=340.2
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCc--ccccccccccccCCCCCCCcceeeecCCCCeeccccc
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSD--LQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRS 78 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~ 78 (371)
|||||+||+||||||||.+||+++|.||+|+++|.+..+.. ..++++++||+|+.+|+|+||||||||||+||+++++
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999999998876543 2467899999999999999999999999999999999
Q ss_pred CCCCccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhh
Q psy12090 79 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREE 158 (371)
Q Consensus 79 ~~~~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~ 158 (371)
++|+.+|+|++++++++|+|||||+|||+.|+++.++++|+||+++|+||+||||+++||+|||||||+|+.|++.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCcc
Q psy12090 159 YPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTT 238 (371)
Q Consensus 159 yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 238 (371)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999878999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC--------------------------------------------------------------------------
Q psy12090 239 CLRFPG-------------------------------------------------------------------------- 244 (371)
Q Consensus 239 ~~rf~~-------------------------------------------------------------------------- 244 (371)
++||||
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 999999
Q ss_pred -CCChHHHHHHHHHhhhcccccceeccCCCccceecCCCCC--------CccceeEEeccchHHHHHHHHHHHhHhhhcc
Q psy12090 245 -RMSMKEVDEQMLNIQNKNASYFVEWIPNNCKTAVCDIPPR--------GLKMAATFIGNTTAIQELFRRISDQFDSMYK 315 (371)
Q Consensus 245 -~~~~~~i~~~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~--------~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~ 315 (371)
+++++++++++.+++.+++.+|++|+|++||+++|++||. +.++++|+|+|+|+|.++|+++.+||++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999999999998 6779999999999999999999999999999
Q ss_pred cccceeccccCCCChhhHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q psy12090 316 RKAFLHWYLGEGMDEMEFTEAASNVLDLISEYQQYQEAAVDDEGGED 362 (371)
Q Consensus 316 krAflH~Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~~~~~~~~ 362 (371)
||||||||++|||||+||.||+++|++|+++|+++..+..|++++++
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~ 447 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEE 447 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 99999999999999999999999999999999999877655433333
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=2.3e-97 Score=748.15 Aligned_cols=357 Identities=35% Similarity=0.698 Sum_probs=336.4
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCC
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGP 80 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~ 80 (371)
|||||+||+||||||||++||++++.||+++++|.+........+++++||+|+..++|+||||+|||||++|+.+++++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 79999999999999999999999999999999998865444456788999999999999999999999999999999999
Q ss_pred CCccccCCccccccc--CCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhh
Q psy12090 81 FGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREE 158 (371)
Q Consensus 81 ~~~~f~~~~~~~~~~--g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~ 158 (371)
++.+|+|++++++++ |+||||++|| ..|++..++++|+||+++|.||.+|||+|+||+|||||||+|+.|++.|+++
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~de 160 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR 160 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHH
Confidence 999999999999987 7999999996 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEeeCCCC-CCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCc
Q psy12090 159 YPDRIMNTFSIVPSPK-VSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVT 237 (371)
Q Consensus 159 yp~~~i~~~~v~P~~~-~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (371)
||++.+++++|+|++. .++++++|||++|++++|.+++|++|++||++|+++|.+.+++..|+|.++|++||++++++|
T Consensus 161 y~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT 240 (475)
T 3cb2_A 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240 (475)
T ss_dssp STTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccc
Confidence 9999999999999985 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-------------------------------------------------------------------------
Q psy12090 238 TCLRFPG------------------------------------------------------------------------- 244 (371)
Q Consensus 238 ~~~rf~~------------------------------------------------------------------------- 244 (371)
.++||||
T Consensus 241 ~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~ 320 (475)
T 3cb2_A 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320 (475)
T ss_dssp TTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEE
T ss_pred cccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhh
Confidence 9999999
Q ss_pred ------CCChHHHHHHHHHhhhcccccceeccCCCccceecCCCCC---CccceeEEeccchHHHHHHHHHHHhHhhhcc
Q psy12090 245 ------RMSMKEVDEQMLNIQNKNASYFVEWIPNNCKTAVCDIPPR---GLKMAATFIGNTTAIQELFRRISDQFDSMYK 315 (371)
Q Consensus 245 ------~~~~~~i~~~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~---~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~ 315 (371)
+++++++.+++.+++.+++.+|++|+|+++|+++|+++|. +.++++++|+|+|+|.++|+++.+||++||+
T Consensus 321 ~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN~TaI~~~f~ri~~kfd~m~~ 400 (475)
T 3cb2_A 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRK 400 (475)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEEEGGGHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecCChHHHHHHHHHHHHHHHHhh
Confidence 3567788888888888899999999999999999999997 6788999999999999999999999999999
Q ss_pred cccceeccccCCCCh---hhHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy12090 316 RKAFLHWYLGEGMDE---MEFTEAASNVLDLISEYQQYQEAAVDDE 358 (371)
Q Consensus 316 krAflH~Y~~~Gmee---~eF~ea~~~l~~l~~~Y~~~~~~~~~~~ 358 (371)
||||||||++|||+| +||.||+++|++|+++|++++...+.+.
T Consensus 401 rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~~~ 446 (475)
T 3cb2_A 401 REAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYISW 446 (475)
T ss_dssp TTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGSCC
T ss_pred cccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhccccCc
Confidence 999999999999987 9999999999999999999977665553
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=2.5e-96 Score=734.67 Aligned_cols=347 Identities=37% Similarity=0.748 Sum_probs=311.8
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCC-cccccccccccccCCCCCCCcceeeecCCCCeecccccC
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSG 79 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~ 79 (371)
|||||+||+||||||||++||++++.||+++++|.+.+++ +.+.+++++||+|+..++|+||+|+|||||++++.++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 9999999999999999999999999999999999887554 445678999999999999999999999999999999999
Q ss_pred CCCccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhC
Q psy12090 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEY 159 (371)
Q Consensus 80 ~~~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~y 159 (371)
+++.+|+|++++.+++|+|||||+|||+.|+++.++++|+||+++|+||.+|||+|+||+|||||||+|+.|++.|+++|
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y 160 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAY 160 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTC
T ss_pred ccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccc
Q psy12090 160 PDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTC 239 (371)
Q Consensus 160 p~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 239 (371)
|++.+++++|+|++..+++++++||++|++++|.+++|++|++||++|+++|.+.++ ..|+|.++|++|+++++++|.+
T Consensus 161 ~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 161 PKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp TTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhh
Confidence 999999999999987789999999999999999999999999999999999999999 7999999999999999999999
Q ss_pred cCCCC---------------------------------------------------------------------------
Q psy12090 240 LRFPG--------------------------------------------------------------------------- 244 (371)
Q Consensus 240 ~rf~~--------------------------------------------------------------------------- 244 (371)
+||||
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence 99999
Q ss_pred CCChHHHHHHHHHhhhcccccceeccC--CCccceecCCCCCCccceeEEeccchHHHHHHHHHHHhHhhhcccccceec
Q psy12090 245 RMSMKEVDEQMLNIQNKNASYFVEWIP--NNCKTAVCDIPPRGLKMAATFIGNTTAIQELFRRISDQFDSMYKRKAFLHW 322 (371)
Q Consensus 245 ~~~~~~i~~~~~~l~~~~~~~~~~w~p--~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~krAflH~ 322 (371)
+++++++++++..+ +++.+|++|+| +++|+++|++||.+.+.++++|+|+|+|.++|+++.++|++||+|||||||
T Consensus 320 ~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~ 397 (426)
T 2btq_B 320 DVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHW 397 (426)
T ss_dssp C----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHH
T ss_pred CCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCCcceeEEecCChHHHHHHHHHHHHHHHHhhcccchhh
Confidence 23444555555545 56789999999 999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHHHHH
Q psy12090 323 YLGEGMDEMEFTEAASNVLDLISEYQQY 350 (371)
Q Consensus 323 Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~ 350 (371)
|++|||||+||.||+++|++|+++|+++
T Consensus 398 Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 398 YENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=4.4e-95 Score=732.60 Aligned_cols=350 Identities=35% Similarity=0.677 Sum_probs=327.1
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCC-CCCcCCCcccccccccccc---cCCCCCCCcceeeecCCCCeeccc
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPT-GAYHGDSDLQLERINVYYN---EASGSKYVPRAILVDLEPGTMDAV 76 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~F~---e~~~~~~~pR~l~vD~e~~~i~~i 76 (371)
|||||+||+||||||||.+||++++.||+++++ |.+..+++. .+++++||+ |+..++|+||+|+|||||++++.+
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i 81 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNV 81 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhh
Confidence 999999999999999999999999999999999 888755544 678899999 999999999999999999999999
Q ss_pred ccCCCCccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHH
Q psy12090 77 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIR 156 (371)
Q Consensus 77 ~~~~~~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~ 156 (371)
+.++ +.+|+|++++++++|+|||||+|||+.|+++.++++|+||+++|.||.+|||+|+||+|||||||+||.|++.|+
T Consensus 82 ~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~ 160 (473)
T 2bto_A 82 KATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLK 160 (473)
T ss_dssp HHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred hccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHH
Confidence 9988 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCC
Q psy12090 157 EEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGV 236 (371)
Q Consensus 157 d~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (371)
++||++.+++++|+|++..++++++|||++|++++|.+++|++|++||++|+++|.+.+++..|+|.++|++||++++++
T Consensus 161 e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~i 240 (473)
T 2bto_A 161 EKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGI 240 (473)
T ss_dssp HHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccc
Confidence 99999999999999998778999999999999999999999999999999999999999998999999999999999999
Q ss_pred ccccCCCC------------------------------------------------------------------------
Q psy12090 237 TTCLRFPG------------------------------------------------------------------------ 244 (371)
Q Consensus 237 t~~~rf~~------------------------------------------------------------------------ 244 (371)
|.++||||
T Consensus 241 t~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~ 320 (473)
T 2bto_A 241 TASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTA 320 (473)
T ss_dssp HHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEE
T ss_pred hhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHH
Confidence 99999998
Q ss_pred -----CCChHHH-HHHHHHhhhcccccceeccCCCccceecCCCCCCccceeEEeccchHHHHHHHHHHHhHhhhccccc
Q psy12090 245 -----RMSMKEV-DEQMLNIQNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGNTTAIQELFRRISDQFDSMYKRKA 318 (371)
Q Consensus 245 -----~~~~~~i-~~~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~krA 318 (371)
+++++++ .+++..++.+++.+| |+|+++|+++|.+||.+.++++++|+|+|+|.++|+++.++|++||+|||
T Consensus 321 ~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~~~s~~~lsNsTaI~~~~~~l~~kf~~m~~rrA 398 (473)
T 2bto_A 321 VLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKA 398 (473)
T ss_dssp EEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSCSEEEEEEEEETTHHHHHHHHHHHHHHHHTTTT
T ss_pred HhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCcceeEEEecCCchHHHHHHHHHHHHHHHhhhcc
Confidence 3556677 777777887888889 99999999999999999999999999999999999999999999999999
Q ss_pred ceeccccCCCChhhHHHHHHHHHHHHHHHHHHhhcc
Q psy12090 319 FLHWYLGEGMDEMEFTEAASNVLDLISEYQQYQEAA 354 (371)
Q Consensus 319 flH~Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~ 354 (371)
|||||+++||||+||.||+++|++|+++|+++....
T Consensus 399 flH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~ 434 (473)
T 2bto_A 399 FANWYLNEGMSEEQINVLRASAQELVQSYQVAEESG 434 (473)
T ss_dssp THHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred hhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999996553
No 6
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=1.1e-37 Score=302.19 Aligned_cols=235 Identities=20% Similarity=0.312 Sum_probs=198.4
Q ss_pred eEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCC
Q psy12090 3 EICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFG 82 (371)
Q Consensus 3 EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 82 (371)
.|..|++|++|+++.+++|+ +++ .| ++.|++|+|++.++.++.
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~-------------------------~g---v~~ia~NTD~q~L~~~~a---- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGI-------------------------EG---VELYAINTDVQHLSTLKV---- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTC-------------------------CS---CEEEEEESBHHHHHTCCC----
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCC-------------------------CC---ceEEEEECCHHHHhcCCC----
Confidence 48899999999999999997 221 01 688999999988776543
Q ss_pred ccccCCcccc-----cccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHh
Q psy12090 83 QIFRPDNFVF-----GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIRE 157 (371)
Q Consensus 83 ~~f~~~~~~~-----~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d 157 (371)
|+.++. .+.|+||||+.| +++.++.+|+||+++|.||.+ +|+||+|||||||++|. ++.+++
T Consensus 52 ----~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~ 118 (338)
T 2r75_1 52 ----PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAK 118 (338)
T ss_dssp ----SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHH
T ss_pred ----CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHH
Confidence 233333 458999999965 799999999999999999999 99999999999999999 666778
Q ss_pred hCCCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCc
Q psy12090 158 EYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVT 237 (371)
Q Consensus 158 ~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (371)
+|| +++++|+|.|...|++++|||+++++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|
T Consensus 119 e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it 194 (338)
T 2r75_1 119 EMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGIT 194 (338)
T ss_dssp HTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHH
T ss_pred hcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhh
Confidence 897 5677777777668999999999999999999999999999999999999999886 899999999999999999
Q ss_pred cccCCCC----------------------------------------------------------------CCChHHHHH
Q psy12090 238 TCLRFPG----------------------------------------------------------------RMSMKEVDE 253 (371)
Q Consensus 238 ~~~rf~~----------------------------------------------------------------~~~~~~i~~ 253 (371)
.++|||| +++++++++
T Consensus 195 ~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~~a~~~ai~s~lle~n~~~~a~~~l~~i~G~~dl~~~ev~~ 274 (338)
T 2r75_1 195 SIVVTPAVINVDFADVRTTLEEGGLSIIGMGEGRGDEKADIAVEKAVTSPLLEGNTIEGARRLLVTIWTSEDIPYDIVDE 274 (338)
T ss_dssp HHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHHCBSSBSSCGGGCSEEEEEEEECTTSCTTHHHH
T ss_pred hhhccCCceeCCHHHhhhheeCCccceeeeccCCccchHHHHHHHHHHhhhhcccchhhhheEEEEEEcCCCCCHHHHHH
Confidence 9999998 345555555
Q ss_pred HHHHhhhcccccceeccCCCccceecCCCCCCccceeEEeccch
Q psy12090 254 QMLNIQNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGNTT 297 (371)
Q Consensus 254 ~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~Nst 297 (371)
.+..++.+. + +|.++++++|..+|.+.+.++|+++|.-
T Consensus 275 a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~~~~vtviatg~ 312 (338)
T 2r75_1 275 VMERIHSKV-----H-PEAEIIFGAVLEPQEQDFIRVAIVATDF 312 (338)
T ss_dssp HHHHHHHHS-----C-TTCEEEEEEEECTTCCSEEEEEEEEECC
T ss_pred HHHHHHHhc-----C-CCCcEEEEEEeCCCCCCeEEEEEEECCC
Confidence 555554432 2 6788999999999999899999999863
No 7
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.7e-37 Score=301.82 Aligned_cols=195 Identities=20% Similarity=0.266 Sum_probs=160.8
Q ss_pred CeeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCC
Q psy12090 1 MREICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGP 80 (371)
Q Consensus 1 M~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~ 80 (371)
|++|++|++|||||++++++|+ |+++ | ++.+.+|+|.+.++.+...
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~~ia~nTD~q~L~~~~a~- 66 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH--G--------------------------VEFVAVNTDLQVLEASNAD- 66 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT--T--------------------------EEEEEEESCHHHHHTCCCS-
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCCCC-
Confidence 5789999999999999999998 5431 1 3678888888766554321
Q ss_pred CCccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCC
Q psy12090 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYP 160 (371)
Q Consensus 81 ~~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp 160 (371)
.+ +.-.+ -++...|+||||+.| +++.++.+|+||+++|.||. |+|+||+|||||||+||.|++.+++ |+
T Consensus 67 ~~-i~iG~-~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d~---~~i~as~GGGTGSG~ap~la~~~ke-~g 135 (353)
T 1w5f_A 67 VK-IQIGE-NITRGLGAGGRPEIG-----EQAALESEEKIREVLQDTHM---VFITAGFGGGTGTGASPVIAKIAKE-MG 135 (353)
T ss_dssp EE-EECCT-TTTTTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHH-TT
T ss_pred cE-EEccC-cccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCE---EEEEeccCCCccccHHHHHHHHHHH-hC
Confidence 11 11111 123456999999955 68899999999999999984 8999999999999999999999997 65
Q ss_pred CceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCcccc
Q psy12090 161 DRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCL 240 (371)
Q Consensus 161 ~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 240 (371)
+++++|+|.|...|.+++|||+.+++++|.+++|++|++||++|+++|.+.+++. ++|.++|++|++.++++|.++
T Consensus 136 ---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~it~~i 211 (353)
T 1w5f_A 136 ---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKGISELI 211 (353)
T ss_dssp ---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcCchhhc
Confidence 4555555554457889999999999999999999999999999999999889885 789999999999999999999
Q ss_pred CCCC
Q psy12090 241 RFPG 244 (371)
Q Consensus 241 rf~~ 244 (371)
||||
T Consensus 212 r~pG 215 (353)
T 1w5f_A 212 TKRG 215 (353)
T ss_dssp HCCC
T ss_pred cCCc
Confidence 9998
No 8
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=7.1e-37 Score=294.71 Aligned_cols=188 Identities=19% Similarity=0.276 Sum_probs=157.9
Q ss_pred eEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCC
Q psy12090 3 EICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFG 82 (371)
Q Consensus 3 EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 82 (371)
+|++|++|||||++++++|+ |+++ | ++.+.+|+|.+.++.++.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~--g--------------------------v~~i~~ntD~q~L~~~~a---- 55 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIAA---- 55 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESBTGGGSSCSC----
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEEcCCHHHHhcCCC----
Confidence 69999999999999999998 4432 0 367899998887665442
Q ss_pred ccccCCcccc-----cccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHh
Q psy12090 83 QIFRPDNFVF-----GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIRE 157 (371)
Q Consensus 83 ~~f~~~~~~~-----~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d 157 (371)
|+.+.. ...|+||||+.| +++.++.+|+||+.+|.||. |+|+||+|||||||++|.|++.+ .
T Consensus 56 ----~~~i~iG~~~t~g~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d~---~~i~as~GGGTGSG~~~~la~~a-~ 122 (320)
T 1ofu_A 56 ----RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGADM---VFITTGMGGGTGTGAAPIIAEVA-K 122 (320)
T ss_dssp ----SEEEECCHHHHTTBCCCSCHHHH-----HHHHHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHHHHH-H
T ss_pred ----CcEEEccCCccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCCE---EEEEeecCCCccccHHHHHHHHH-H
Confidence 334433 356899999855 68899999999999999984 89999999999999999887655 5
Q ss_pred hCCCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCc
Q psy12090 158 EYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVT 237 (371)
Q Consensus 158 ~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (371)
+|+ +..+++.+.|+ ..|.+++|||+.+++++|.+++|++|++||++|+++|.+.+++. ++|+++|++|++.++++|
T Consensus 123 e~g-~lt~~vv~~P~--~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it 198 (320)
T 1ofu_A 123 EMG-ILTVAVVTRPF--PFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGIS 198 (320)
T ss_dssp HTT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred hcC-CcEEEEEeCCc--cccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccH
Confidence 573 44444445554 47889999999999999999999999999999999999999885 789999999999999999
Q ss_pred cccCCCC
Q psy12090 238 TCLRFPG 244 (371)
Q Consensus 238 ~~~rf~~ 244 (371)
.++||||
T Consensus 199 ~~ir~pG 205 (320)
T 1ofu_A 199 DIIKRPG 205 (320)
T ss_dssp HHHHSCS
T ss_pred hhcccCC
Confidence 9999999
No 9
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=4.2e-37 Score=299.77 Aligned_cols=192 Identities=21% Similarity=0.322 Sum_probs=159.0
Q ss_pred eEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCC
Q psy12090 3 EICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFG 82 (371)
Q Consensus 3 EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 82 (371)
+|++|++|||||+++++||+ ++++. -..+.+++|.+.++.+... .+
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~-----~gi~g----------------------------v~fia~NTD~q~L~~~~a~-~k 84 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKM-----EGIEG----------------------------AKTVAINTDAQQLIRTKAD-KK 84 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----HTCTT----------------------------EEEEEEESBHHHHHTSCCS-EE
T ss_pred eEEEEeeCchHHHHHHHHHH-----hCCCC----------------------------CCEEEEcCcHHHHhcCCCC-cE
Confidence 69999999999999999998 23210 1347777776655544321 11
Q ss_pred ccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCc
Q psy12090 83 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDR 162 (371)
Q Consensus 83 ~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~ 162 (371)
-+..+ -++...|+||||+.| +++.++.+|+||+++|.||.+ +|+||+|||||||+++.|++.+++ | .
T Consensus 85 i~iG~--~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~-~- 151 (364)
T 2vap_A 85 ILIGK--KLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I-G- 151 (364)
T ss_dssp EECCT--TTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T-T-
T ss_pred EEecc--ccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h-C-
Confidence 11111 123456999999987 789999999999999999988 999999999999999999999998 7 3
Q ss_pred eeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccccCC
Q psy12090 163 IMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCLRF 242 (371)
Q Consensus 163 ~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~rf 242 (371)
+++++|+|.|...+.+++|||+++++++|.+++|+++++||++|+++|. .+.+ .++|.++|++|++.++++|.++||
T Consensus 152 -~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it~~ir~ 228 (364)
T 2vap_A 152 -ALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLVELITK 228 (364)
T ss_dssp -CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -CcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhhHHhhc
Confidence 4555566655557889999999999999999999999999999999998 8888 899999999999999999999999
Q ss_pred CC
Q psy12090 243 PG 244 (371)
Q Consensus 243 ~~ 244 (371)
||
T Consensus 229 pG 230 (364)
T 2vap_A 229 DG 230 (364)
T ss_dssp CC
T ss_pred CC
Confidence 98
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=2.4e-37 Score=302.90 Aligned_cols=240 Identities=18% Similarity=0.202 Sum_probs=186.6
Q ss_pred eeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCC
Q psy12090 2 REICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPF 81 (371)
Q Consensus 2 ~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~ 81 (371)
.+|++|++|||||+++++||+ |+++ | ++.+.+|+|.+.++.++.. .
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~a~-~ 57 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK--G--------------------------VEFIAINTDAQALLMSDAD-V 57 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC--S--------------------------EEEEEEESCHHHHHHCCCS-E
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC--C--------------------------CCEEEecCCHHHHhcCCCC-c
Confidence 479999999999999999998 5432 0 3678899888776554421 1
Q ss_pred CccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCC
Q psy12090 82 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPD 161 (371)
Q Consensus 82 ~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~ 161 (371)
+ +.-. .-++...|+||||+.| +++.++.+|+||+++|.|| +|+|+||+|||||||+++.|++ |+.+|+
T Consensus 58 ~-i~iG-~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e~g- 125 (382)
T 1rq2_A 58 K-LDVG-RDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARKLG- 125 (382)
T ss_dssp E-EECC-TTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHHT-
T ss_pred E-EEec-ccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHHcC-
Confidence 1 1111 1123456899999955 6889999999999999998 5899999999999999999999 667786
Q ss_pred ceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccccC
Q psy12090 162 RIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCLR 241 (371)
Q Consensus 162 ~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r 241 (371)
+..+++++.|+ ..|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++|.++|
T Consensus 126 ~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~it~~ir 202 (382)
T 1rq2_A 126 ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGITDLIT 202 (382)
T ss_dssp CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 44555555554 47899999999999999999999999999999999999989885 7899999999999999999999
Q ss_pred CCC---------------------------------------------------------------CCChHHHHHHHHHh
Q psy12090 242 FPG---------------------------------------------------------------RMSMKEVDEQMLNI 258 (371)
Q Consensus 242 f~~---------------------------------------------------------------~~~~~~i~~~~~~l 258 (371)
||| +++++++++.+..+
T Consensus 203 ~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I 282 (382)
T 1rq2_A 203 TPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQGVLMSIAGGSDLGLFEINEAASLV 282 (382)
T ss_dssp SBCSSCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCGGGCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred cCCceeccHHHHHHhccCCCeeEEEeeecccccHHHHHHHHHHhCcCcCCChhchheEEEEEEeCCCCCHHHHHHHHHHH
Confidence 999 45566666665555
Q ss_pred hhcccccceeccCCCccceecCCCCCCccceeEEeccc
Q psy12090 259 QNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGNT 296 (371)
Q Consensus 259 ~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~Ns 296 (371)
+.+.. .+.+++.+.|..++.+.+..+++++-.
T Consensus 283 ~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIatG 314 (382)
T 1rq2_A 283 QDAAH------PDANIIFGTVIDDSLGDEVRVTVIAAG 314 (382)
T ss_dssp HHHSC------TTCEEEEEEEECGGGTTEEEEEEEEEC
T ss_pred HHhhC------CCCCEEEEEEeCCCCCCeEEEEEEEcc
Confidence 54322 356678888888777777788877743
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.2e-36 Score=299.18 Aligned_cols=235 Identities=18% Similarity=0.234 Sum_probs=189.8
Q ss_pred eeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCC
Q psy12090 2 REICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPF 81 (371)
Q Consensus 2 ~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~ 81 (371)
.+|++|++|||||+++++||+ |+++ | .+.+.+|+|.+.+..+..
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~--g--------------------------v~fia~NTD~q~L~~~~a--- 55 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE--G--------------------------VEFICANTDAQALKNIAA--- 55 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC--S--------------------------EEEEEEESCTTTTSSCSS---
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC--C--------------------------CCEEEecCCHHHHhcCCC---
Confidence 479999999999999999997 5431 0 367899998887655432
Q ss_pred CccccCCcccc-----cccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHH
Q psy12090 82 GQIFRPDNFVF-----GQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIR 156 (371)
Q Consensus 82 ~~~f~~~~~~~-----~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~ 156 (371)
|+.+.. ...|+||||+.| +++.++.+|+||+++|.|| +|+|+||+|||||||+++.|++.++
T Consensus 56 -----~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k 122 (394)
T 2vaw_A 56 -----RTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK 122 (394)
T ss_dssp -----SCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH
T ss_pred -----CcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH
Confidence 334443 356899999855 6888999999999999998 4899999999999999999999999
Q ss_pred hhCCCceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCC
Q psy12090 157 EEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGV 236 (371)
Q Consensus 157 d~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~ 236 (371)
+| .+ ++++|+|.|...|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++
T Consensus 123 -e~-g~--ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~i 197 (394)
T 2vaw_A 123 -EM-GI--LTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGI 197 (394)
T ss_dssp -HH-TC--EEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHH
T ss_pred -Hc-CC--cEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHH
Confidence 56 34 445555444447889999999999999999999999999999999999999885 78999999999999999
Q ss_pred ccccCCCC----------------------------------------------------------------CCChHHHH
Q psy12090 237 TTCLRFPG----------------------------------------------------------------RMSMKEVD 252 (371)
Q Consensus 237 t~~~rf~~----------------------------------------------------------------~~~~~~i~ 252 (371)
|.++|||| ++++++++
T Consensus 198 t~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~rv~ea~~~A~~spLl~~~d~~~ak~~lv~i~~~~dl~~~ev~ 277 (394)
T 2vaw_A 198 SDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVNITAGPDLSLGEYS 277 (394)
T ss_dssp HHHHHSBCSSCCCHHHHHHHHTTTCCBEEEEEEECSTTHHHHHHHHHHTCGGGTTCCTTTCSEEEEEEEECTTCCHHHHH
T ss_pred HHHhcCCCcccccHHHHHHhccCCCceeEEEEeccccchHHHHHHHHHhcCccCCCCccccceeEEEEEeCCCCCHHHHH
Confidence 99999999 45566666
Q ss_pred HHHHHhhhcccccceeccCCCccceecCCCCCCccceeEEeccc
Q psy12090 253 EQMLNIQNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGNT 296 (371)
Q Consensus 253 ~~~~~l~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~Ns 296 (371)
+.+..++.+.. .+.+++.+.|..++.+.+.++++++-.
T Consensus 278 ~a~~~I~~~~~------~~a~i~~G~~~d~~~~~~v~VtvIatG 315 (394)
T 2vaw_A 278 DVGNIIEQFAS------EHATVKVGTVIDADMRDELHVTVVATG 315 (394)
T ss_dssp HHHHHHHHHSC------TTSEEEEEEEECSSCCSCEEEEEEEEC
T ss_pred HHHHHHHHhcC------CCCCEEEEeecCCCCCCeEEEEEEEcc
Confidence 66555554322 145677888888887777888887753
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=1.6e-36 Score=297.17 Aligned_cols=239 Identities=17% Similarity=0.245 Sum_probs=189.4
Q ss_pred eeEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCC
Q psy12090 2 REICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPF 81 (371)
Q Consensus 2 ~EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~ 81 (371)
.+|..|++|||||++++++|+ |+++ + ++.+.+|+|...++.+... .
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~-------------------------g---v~fia~NTD~q~L~~~~a~-~ 57 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ-------------------------G---VEYIAVNTDAQALNLSKAE-V 57 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC-------------------------S---CEEEEEESBHHHHHTCCCS-E
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC-------------------------C---CCEEEEeCCHHHHhcCCCC-c
Confidence 469999999999999999998 4331 0 4679999988776655421 1
Q ss_pred CccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCC
Q psy12090 82 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPD 161 (371)
Q Consensus 82 ~~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~ 161 (371)
+-+..+ -++...|+||||+.| +++.++.+|+||+++|.||. |+|+||+|||||||+|+.|++.+++ |+
T Consensus 58 ki~iG~--~~t~G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D~---ffI~asmGGGTGSG~apvla~~ake-~g- 125 (382)
T 2vxy_A 58 KMQIGA--KLTRGLGAGANPEVG-----KKAAEESKEQIEEALKGADM---VFVTAGMGGGTGTGAAPVIAQIAKD-LG- 125 (382)
T ss_dssp EEECCH--HHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSE---EEEEEESSSSHHHHHHHHHHHHHHH-TT-
T ss_pred EEEecc--cccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCCE---EEEEeccCCCCCCcHHHHHHHHHHH-hC-
Confidence 111111 123456999999954 68899999999999999984 8999999999999999999998886 85
Q ss_pred ceeeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccccC
Q psy12090 162 RIMNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCLR 241 (371)
Q Consensus 162 ~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r 241 (371)
+ ++++|+|.|...|.++++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|.++|
T Consensus 126 ~--ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt~~ir 202 (382)
T 2vxy_A 126 A--LTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGISDLIA 202 (382)
T ss_dssp C--EEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHHTTTS
T ss_pred C--CeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 4 444455544457999999999999999999999999999999999999989885 7899999999999999999999
Q ss_pred CCC---------------------------------------------------------------CCChHHHHHHHHHh
Q psy12090 242 FPG---------------------------------------------------------------RMSMKEVDEQMLNI 258 (371)
Q Consensus 242 f~~---------------------------------------------------------------~~~~~~i~~~~~~l 258 (371)
||| +++++++++.+..+
T Consensus 203 ~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I 282 (382)
T 2vxy_A 203 TPGLINLDFADVKTIMSNKGSALMGIGIATGENRAAEAAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIV 282 (382)
T ss_dssp SCCTTCCCHHHHHHHTTCSSEEEEEEEEEESTTHHHHHHHHHHTCTTSCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred CCCccccCHHHHHHhccCCCceEEEEEecccccHHHHHHHHHHhCcCcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHH
Confidence 999 45666666666655
Q ss_pred hhcccccceeccCCCccceecCCCCCCccceeEEecc
Q psy12090 259 QNKNASYFVEWIPNNCKTAVCDIPPRGLKMAATFIGN 295 (371)
Q Consensus 259 ~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~s~~~l~N 295 (371)
+.+.. .+.+++.+.+..++.+.+.++++++-
T Consensus 283 ~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIat 313 (382)
T 2vxy_A 283 ASASD------QDVNMIFGSVINENLKDEIVVTVIAT 313 (382)
T ss_dssp HHHSC------TTCEEEEEEEECTTCSSEEEEEEEEE
T ss_pred HHhcC------CCCCEEEEeecCCCCCCeEEEEEEEc
Confidence 54322 24567778888877777777777764
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=99.98 E-value=5.4e-33 Score=271.82 Aligned_cols=214 Identities=16% Similarity=0.153 Sum_probs=168.0
Q ss_pred EEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCCc
Q psy12090 4 ICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQ 83 (371)
Q Consensus 4 IItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 83 (371)
|..|.+||+|+.+.+++.+ +++ .+++|+||+|+||+++..++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~~------------------------~~g~~~~~~iavNtd~~dl~~L~~~~~-- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YKF------------------------SNGTTCYPTLAVNFAESDMMHLQNIIK-- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CBC------------------------TTSCBSCCEEEEESSGGGGTTCSSSCG--
T ss_pred EEEEEECCcHHHHHHHHHH-----hCc------------------------ccCCcCceEEEEECCHHHHHHHhcCCC--
Confidence 6789999999999988742 110 134788999999999999988876653
Q ss_pred cccCCcc-cccccCCCccCCCcccccc-----hh--hHHHHHHHHHHHhh---hcCCCCcceEEeecCCCcccCchHHHH
Q psy12090 84 IFRPDNF-VFGQSGAGNNWAKGHYTEG-----AE--LVDAVLDVVRKEAE---SCDCLQGFQLTHSLGGGTGSGMGTLMI 152 (371)
Q Consensus 84 ~f~~~~~-~~~~~g~gnnwa~G~~~~g-----~~--~~~~~~d~ir~~~E---~cD~lqgf~i~~sl~GGTGSG~~s~ll 152 (371)
++.+ +.++.|+||||+.|++..| ++ +.+++++.||+.+| .||.+|+|+|++|+|||||||+|+.|+
T Consensus 94 ---~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la 170 (427)
T 3m89_A 94 ---EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVL 170 (427)
T ss_dssp ---GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHH
T ss_pred ---cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHH
Confidence 3444 4577899999999998874 54 49999999999999 889999999999999999999999999
Q ss_pred HHHHhhCCCceeeEEEeeCCCCCCCccchhhHHHHHHHHH---hh------------ccCeeeEecchHHHHHhhhcCC-
Q psy12090 153 SKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQL---VE------------NTDETFCIDNEALYEICFRTLK- 216 (371)
Q Consensus 153 e~l~d~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l---~e------------~sd~~i~~dN~~L~~~~~~~~~- 216 (371)
+.|+++||++++++++++|++. + .++||++++++.| .+ ++|++|++||++|.+++.+...
T Consensus 171 ~~lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~ 246 (427)
T 3m89_A 171 QLIREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGT 246 (427)
T ss_dssp HHHHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCS
T ss_pred HHHHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcccc
Confidence 9999999999999999999973 3 3469999999997 44 9999999999998877755432
Q ss_pred -CCC---CCcc-chhhHHHhhhcCCcccc-C-CCC--CCChHHHHHHH
Q psy12090 217 -LTT---PTYG-DLNHLVSAAMSGVTTCL-R-FPG--RMSMKEVDEQM 255 (371)
Q Consensus 217 -~~~---~~~~-~~N~~ia~~i~~~t~~~-r-f~~--~~~~~~i~~~~ 255 (371)
... ++|. .+|++|++.|++++..+ | +|| +++..++...+
T Consensus 247 ~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L 294 (427)
T 3m89_A 247 KDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLL 294 (427)
T ss_dssp SSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhC
Confidence 123 3899 79999999999998765 4 688 66788877655
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.97 E-value=2.9e-31 Score=255.25 Aligned_cols=193 Identities=15% Similarity=0.283 Sum_probs=155.5
Q ss_pred EEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCCc
Q psy12090 4 ICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQ 83 (371)
Q Consensus 4 IItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 83 (371)
|..|.+|++|+.+..++.+.- . + -..+.++++...+..+...+.+.
T Consensus 7 I~VIGvGGaG~Nav~~m~~~~-----~---~--------------------------v~~iaiNTD~q~L~~~~~~~~ki 52 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGIC-----G---D--------------------------YNALFINTSKKDLDSLKHAKHTY 52 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHHC-----T---T--------------------------SEECEEESCHHHHHTCSSCSCEE
T ss_pred EEEEEeCCcHHHHHHHHHHcC-----C---C--------------------------ceEEEEECCHHHHhhCCCCccEE
Confidence 778999999999999986411 0 0 14578888876655443211111
Q ss_pred cccCCcccccccCCCccCCCcccccchhhHHHHH-HHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCc
Q psy12090 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVL-DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDR 162 (371)
Q Consensus 84 ~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~-d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~ 162 (371)
.+....|+|+||+.| +++.++.+ |+||+.+|+|+.+|||+|+||+|||||||++|.|++.|+++||++
T Consensus 53 ------~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k 121 (360)
T 3v3t_A 53 ------HIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNK 121 (360)
T ss_dssp ------ECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------EcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCC
Confidence 122356899998876 47788888 999999999999999999999999999999999999999999999
Q ss_pred eeeEEEeeCCCCCCCccchhhHHHHHHHHHhh---ccCee--eEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCc
Q psy12090 163 IMNTFSIVPSPKVSDTVVEPYNATLSIHQLVE---NTDET--FCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVT 237 (371)
Q Consensus 163 ~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e---~sd~~--i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 237 (371)
++..++|+|++ .+.+++|||+++++++|.+ ++|++ |++||++ .|+|.++|++|+++++++|
T Consensus 122 ~v~~vtV~Pf~--~Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt 187 (360)
T 3v3t_A 122 HFGFVGVLPKA--TEDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFM 187 (360)
T ss_dssp EEEEEEEECCT--TSCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCC--ccchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHH
Confidence 99999999997 4679999999999999999 55555 9999998 6889999999999999999
Q ss_pred cccCCCC--CCChHHHHHHH
Q psy12090 238 TCLRFPG--RMSMKEVDEQM 255 (371)
Q Consensus 238 ~~~rf~~--~~~~~~i~~~~ 255 (371)
.++|||| +++..++...+
T Consensus 188 ~~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 188 NMSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp GGGSCCSSCCCCHHHHHHHH
T ss_pred HhhccCCceeeeHHHHHHHH
Confidence 9999999 66777776544
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.96 E-value=3.5e-30 Score=250.12 Aligned_cols=203 Identities=16% Similarity=0.290 Sum_probs=160.6
Q ss_pred EEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCCc
Q psy12090 4 ICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQ 83 (371)
Q Consensus 4 IItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 83 (371)
|..|.||++|+.+-+++.+. ++. . ...|.+++|.+.+..+... .+-
T Consensus 20 IkVIGVGG~G~NaVn~m~~~-----~~~----------------g------------vefiaiNTD~qaL~~s~a~-~ki 65 (396)
T 4dxd_A 20 LKVIGVGGGGNNAVNRMIDH-----GMN----------------N------------VEFIAINTDGQALNLSKAE-SKI 65 (396)
T ss_dssp EEEEEEHHHHHHHHHHHHHH-----CCC----------------S------------EEEEEEESCHHHHHTCCCS-EEE
T ss_pred EEEEEECCcHHHHHHHHHHh-----CCC----------------C------------ceEEEEECCHHHHhcCCCc-cEE
Confidence 77899999999998887642 110 0 2358888877655443221 111
Q ss_pred cccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCce
Q psy12090 84 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRI 163 (371)
Q Consensus 84 ~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~ 163 (371)
++.+ -++...|+||||+.| +++.++.+|+||+.+|.||. |+|+||+|||||||++|.|++.+ .+|+
T Consensus 66 ~lG~--~~t~GlGAG~np~vG-----~eaaee~~d~Ir~~le~~D~---ffItagmGGGTGSGaapvIaeia-ke~g--- 131 (396)
T 4dxd_A 66 QIGE--KLTRGLGAGANPEIG-----KKAAEESREQIEDAIQGADM---VFVTSGMGGGTGTGAAPVVAKIA-KEMG--- 131 (396)
T ss_dssp ECCH--HHHTTSCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSE---EEEEEETTSSHHHHHHHHHHHHH-HHTT---
T ss_pred EcCc--cccCCCCCCCChHHH-----HHHHHHHHHHHHHHHcCCCE---EEEEeccCCCccccHHHHHHHHH-HhcC---
Confidence 1111 112335899998765 68899999999999999994 89999999999999999887655 5675
Q ss_pred eeEEEeeCCCCCCCccchhhHHHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccccCCC
Q psy12090 164 MNTFSIVPSPKVSDTVVEPYNATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTCLRFP 243 (371)
Q Consensus 164 i~~~~v~P~~~~~e~~~~~yN~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~rf~ 243 (371)
+++++|+|.|...|..++|||++++++.|.+++|++|++||++|+++|.+.+.+. ++|..+|++|++.++++|.++|||
T Consensus 132 ~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~-~af~~aN~ll~q~VsgIT~~irfp 210 (396)
T 4dxd_A 132 ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMM-EAFKEADNVLRQGVQGISDLIAVS 210 (396)
T ss_dssp CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHH-HHHHHHHHHHHHHHHhhhhhhccC
Confidence 4677777666568899999999999999999999999999999999999888885 599999999999999999999999
Q ss_pred C--CCChHHHHHHH
Q psy12090 244 G--RMSMKEVDEQM 255 (371)
Q Consensus 244 ~--~~~~~~i~~~~ 255 (371)
| +++..++...+
T Consensus 211 G~iNvDfaDv~t~m 224 (396)
T 4dxd_A 211 GEVNLDFADVKTIM 224 (396)
T ss_dssp CTBCCCHHHHHHHH
T ss_pred CcccCCHHHHHHHh
Confidence 9 66777776654
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.75 E-value=1.3e-18 Score=171.36 Aligned_cols=199 Identities=23% Similarity=0.255 Sum_probs=141.7
Q ss_pred EEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCCc
Q psy12090 4 ICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFGQ 83 (371)
Q Consensus 4 IItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 83 (371)
|..|.+||||+.|.+.|.+ +... .....+..++|.|+++...+..+.... +.
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~~----------------------~~~~~~~~~~iaiNTd~~~L~~~~~~~-~~ 69 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KETQ----------------------IKNNKYPYRAILVNTNSQDFNKIEIKN-TG 69 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCCC----------------------CTTCSCCCEEEEEECCCHHHHHSCCCS-CS
T ss_pred EEEEEECCchHHHHHHHHh-----cccc----------------------cccccccccEEEEECCHHHHhhccCcc-hh
Confidence 6789999999999998853 1100 011234468999999987765543211 11
Q ss_pred cccCCcccccc--cCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCC
Q psy12090 84 IFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPD 161 (371)
Q Consensus 84 ~f~~~~~~~~~--~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~ 161 (371)
. ....++.. .|+|+||..|+ ...++..+++.+.|+..++.+|.+ +|++++|||||+|.+|.+++.+++. .
T Consensus 70 ~--~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d~v---fi~ag~GGGTGtGa~pvia~~~ke~--~ 141 (389)
T 4ei7_A 70 N--VRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRDFI---WITCGLGGGTGTGALLKAIEMLYEH--D 141 (389)
T ss_dssp S--EEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCSEE---EEEEETTSSHHHHHHHHHHHHHHHT--T
T ss_pred h--hhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCccEE---EEEecCCCCCccccHHHHHHHHHHc--C
Confidence 1 11222222 49999988886 445666777777777777777765 9999999999999999999999985 5
Q ss_pred ceeeEEEeeCCCCCCCccchhhHHHHHHHHH---hhccCeeeEecchHHHHHhhhcCC--CCCCCccchhhHHHhhhcCC
Q psy12090 162 RIMNTFSIVPSPKVSDTVVEPYNATLSIHQL---VENTDETFCIDNEALYEICFRTLK--LTTPTYGDLNHLVSAAMSGV 236 (371)
Q Consensus 162 ~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~l---~e~sd~~i~~dN~~L~~~~~~~~~--~~~~~~~~~N~~ia~~i~~~ 236 (371)
.++..++++|+. .|...+..|+.-++..| .+.+|.+|++||+.|.++..+.-. .-...|+.+|++|++.+..+
T Consensus 142 ~~~~~vvt~Pf~--~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i 219 (389)
T 4ei7_A 142 YNFGLLLTLPRD--AEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEI 219 (389)
T ss_dssp CCEEEEEEECCG--GGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCC--cCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 677888889986 56656666666666666 577899999999999998755321 11456889999999987666
Q ss_pred cccc
Q psy12090 237 TTCL 240 (371)
Q Consensus 237 t~~~ 240 (371)
+...
T Consensus 220 ~~~~ 223 (389)
T 4ei7_A 220 NLVT 223 (389)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5433
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.39 E-value=1e-12 Score=122.17 Aligned_cols=251 Identities=17% Similarity=0.252 Sum_probs=153.5
Q ss_pred eEEEEecCChhhHHHHHHHHHHHhhcccCCCCCCcCCCcccccccccccccCCCCCCCcceeeecCCCCeecccccCCCC
Q psy12090 3 EICHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGSKYVPRAILVDLEPGTMDAVRSGPFG 82 (371)
Q Consensus 3 EIItiqiGq~GnqiG~~fw~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 82 (371)
.|..|.+|++|+.+.+.+++ ++ +.++.||++.+-+...+ ..+
T Consensus 4 ki~VvGvGGAG~Nii~rL~~------------------------------~G------a~~iAiNTD~q~L~~~k--~~~ 45 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVD------------------------------LG------EAVHCFDTCDKNVVDVH--RSV 45 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGG------------------------------GG------GGEEEEESSSTTCCGGG--GGS
T ss_pred eEEEEEEcCcchHHHHHHHH------------------------------cC------CCEEEEECchHHhhhhh--hhc
Confidence 56778899999999877643 00 35677887766543221 111
Q ss_pred ccccCCcccccccCCCccCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCc
Q psy12090 83 QIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDR 162 (371)
Q Consensus 83 ~~f~~~~~~~~~~g~gnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~ 162 (371)
.. .+..+..|+|.+ ...|.+..++..+.|++.++.+|-+ +|+++||||||||.+|.+++.+++. +.
T Consensus 46 ~~----~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~--Ga 111 (315)
T 3r4v_A 46 NV----TLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR--KA 111 (315)
T ss_dssp EE----EECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--TC
T ss_pred ce----eeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--CC
Confidence 11 112344566666 4566777777777888888877766 9999999999999999999999998 44
Q ss_pred eeeEEEeeCCCCCCCccchhhH---HHHHHHHHhhccCeeeEecchHHHHHhhhcCCCCCCCccchhhHHHhhhcCCccc
Q psy12090 163 IMNTFSIVPSPKVSDTVVEPYN---ATLSIHQLVENTDETFCIDNEALYEICFRTLKLTTPTYGDLNHLVSAAMSGVTTC 239 (371)
Q Consensus 163 ~i~~~~v~P~~~~~e~~~~~yN---~~lsl~~l~e~sd~~i~~dN~~L~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 239 (371)
.+.++++.|.+ +. +..-| |+-+|..|.+.+|.+|+|+ +.+ ..+...++.+|+-++..|..+...
T Consensus 112 lvVavVt~~~E--~~--~~~~Nai~al~~LE~La~~~dt~Iv~d---~Le------n~~~lp~~~lN~eia~rL~al~~l 178 (315)
T 3r4v_A 112 SFVSFVVGAME--ST--DNLGNDIDTMKTLEAIAVNKHLPIVVN---YVP------NTQGRSYESINDEIAEKIRKVVLL 178 (315)
T ss_dssp CEEEEEEECCS--SH--HHHHHHHHHHHHHHHHHHHHTSCEEEE---EEE------CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCC--cc--hhhhchHHHHHHHHHHHhccCCcEEEe---ccc------cCCCCchHHHHHHHHHHHHHHHHH
Confidence 67788888743 22 33445 6777999999999999887 211 122445699999999988776433
Q ss_pred cCCC-CCCChHHHHHHHHHhhhcc-------------cccceeccCCCccce---------------------ecCCCCC
Q psy12090 240 LRFP-GRMSMKEVDEQMLNIQNKN-------------ASYFVEWIPNNCKTA---------------------VCDIPPR 284 (371)
Q Consensus 240 ~rf~-~~~~~~~i~~~~~~l~~~~-------------~~~~~~w~p~~~~~~---------------------~~~~~~~ 284 (371)
+-.. +.+...+|..-+..-+..+ ..+-....|.++.+. +-.....
T Consensus 179 ~~~~~~~ld~~di~n~~~~~~~~~~~~p~~~~lh~~~~~~~a~~~~~~is~~sly~~~~~~v~f~~~~~r~~g~~~~~~~ 258 (315)
T 3r4v_A 179 VNQNHGRLDVHDVANWVRFTDKHNYLIPQVCELHIETTRKDAENVPEAISQLSLYLDPSKEVAFGTPIYRKVGIMKVDDL 258 (315)
T ss_dssp TSSCSBTCCHHHHHHHHSGGGTCTTSCCCEEEEEEESSHHHHHTSTTCCEEEEEESSGGGCCCCSCCSEEEEEECCTTCT
T ss_pred hccCcccccHHHHhhHhhhhcccCccCceEEEEEEEcccccccccccchhheeecCCCccccccccceEEeecccCcccc
Confidence 2211 1344445443221111000 001112223332211 1111100
Q ss_pred -CccceeEEeccchHHHHHHHHHHHhHhhhccccc
Q psy12090 285 -GLKMAATFIGNTTAIQELFRRISDQFDSMYKRKA 318 (371)
Q Consensus 285 -~~~~s~~~l~Nst~i~~~l~~~~~~~~~m~~krA 318 (371)
-..--+.++-|+-++...++++-++-..|-+.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (315)
T 3r4v_A 259 DVTDDQIHFVINSVGVVEIMKTITDSKLEMTRQQS 293 (315)
T ss_dssp TCCSSEEEEEEECTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccceeEEEeccccHHHHHHHHHHHHHHHHHHHH
Confidence 1113467888999999999998888777766553
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.31 E-value=0.00018 Score=46.02 Aligned_cols=26 Identities=27% Similarity=0.446 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccC
Q psy12090 331 MEFTEAASNVLDLISEYQQYQEAAVD 356 (371)
Q Consensus 331 ~eF~ea~~~l~~l~~~Y~~~~~~~~~ 356 (371)
++|.||+++|.+|+++|+++.....+
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e 26 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVE 26 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccc
Confidence 47999999999999999999766544
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=76.53 E-value=3.6 Score=33.82 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 113 VDAVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 113 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
.+.+.++|+..+++.|. +|++|+.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 45678888999999999 9999999998886
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=72.14 E-value=7 Score=31.68 Aligned_cols=31 Identities=13% Similarity=0.270 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 113 VDAVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 113 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
.+++.++++..+++.|.=+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 4567888999999998888999999998886
No 21
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=60.45 E-value=13 Score=30.72 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 113 VDAVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 113 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
.+.+.++++..+++.|.-+|++|+.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGS 71 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSAS 71 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 4567788888888888889999999999887
No 22
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=58.59 E-value=6.3 Score=32.57 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhhc-CCCCcceEEeecCCCcc
Q psy12090 113 VDAVLDVVRKEAESC-DCLQGFQLTHSLGGGTG 144 (371)
Q Consensus 113 ~~~~~d~ir~~~E~c-D~lqgf~i~~sl~GGTG 144 (371)
.+++.++++..+++. |.=+|++|+.++-|||=
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp 75 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSP 75 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCH
Confidence 456778888888888 88889999999998874
No 23
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=53.98 E-value=8.3 Score=35.01 Aligned_cols=71 Identities=14% Similarity=0.265 Sum_probs=47.0
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCCCCC
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPKVSD 177 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~~~e 177 (371)
..|++..-..+.+.+++.|++.+++.....=++.=||||| +++...+-.|+..+|...+.. ..|-.|..++
T Consensus 96 H~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~-~tFg~PrvGn 166 (258)
T 3g7n_A 96 MRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVS-NALNAFPIGN 166 (258)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEE-EEESCCCCBC
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeE-EEecCCCCCC
Confidence 3455544456677788888888887665554566689975 467888888888898765433 3455554454
No 24
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=51.25 E-value=7 Score=32.95 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 114 DAVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 114 ~~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
+++.++++..+++.|.-+|++|+.++-|||
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGS 90 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGS 90 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 356778888899999889999999999997
No 25
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=51.07 E-value=19 Score=29.05 Aligned_cols=39 Identities=13% Similarity=0.345 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHH
Q psy12090 112 LVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMI 152 (371)
Q Consensus 112 ~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~ll 152 (371)
-.+++.+++++.+++.|.-+|++++.++ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~ 81 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILT 81 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 3567889999999999999999999999 55444444333
No 26
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=49.41 E-value=57 Score=27.74 Aligned_cols=83 Identities=16% Similarity=0.134 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhh-cCCCCcc-eEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCCCCCccchhhHHHHHHHH
Q psy12090 114 DAVLDVVRKEAES-CDCLQGF-QLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSIHQ 191 (371)
Q Consensus 114 ~~~~d~ir~~~E~-cD~lqgf-~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~~~e~~~~~yN~~lsl~~ 191 (371)
..+...|++.+.. .+ +|+ .++.+.+.|.- -+++.++-.|+.+||... -.+|+|+...++.- .+-| -..+..
T Consensus 26 ~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i~--L~~v~Pf~~~~~~w-~~~~-~~~y~~ 98 (181)
T 2nx2_A 26 YYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDLK--VAVITPFYEQEKNW-KEPN-KEQYEA 98 (181)
T ss_dssp HHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTCE--EEEEESSBCTTTTS-CHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCce--EEEEecccchhhCC-CHHH-HHHHHH
Confidence 3444555544444 22 253 55555555543 234555555677898443 45577886544422 2333 346777
Q ss_pred HhhccCeeeEec
Q psy12090 192 LVENTDETFCID 203 (371)
Q Consensus 192 l~e~sd~~i~~d 203 (371)
+.+.+|-+..+.
T Consensus 99 ll~~aD~v~~l~ 110 (181)
T 2nx2_A 99 VLAQADYEASLT 110 (181)
T ss_dssp HHHHCSEEEESS
T ss_pred HHHhCCeEEecc
Confidence 888888877664
No 27
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=44.68 E-value=17 Score=33.34 Aligned_cols=71 Identities=20% Similarity=0.283 Sum_probs=44.7
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCCCCC
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPKVSD 177 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~~~e 177 (371)
.+|++..-..+.+.+++.|++.+++.....=++.=|||||+ ++..++-.|+..+|...+ ....|-.+..++
T Consensus 110 H~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~-~~~tfg~PrvGn 180 (279)
T 3uue_A 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLY-KTYLFGLPRLGN 180 (279)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCS-EEEEESCCCCBC
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCce-EEEEecCCCcCC
Confidence 44555444566677778888888776555545556899654 677777788888876533 333444454443
No 28
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=39.50 E-value=11 Score=34.75 Aligned_cols=36 Identities=19% Similarity=0.394 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHH
Q psy12090 113 VDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIR 156 (371)
Q Consensus 113 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~ 156 (371)
.+++++++|+.+++=..+ +|+|.|+|++++..|.=-
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~gG 48 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEAGD 48 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHhCC
Confidence 578899999999876666 677889999998887643
No 29
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=37.67 E-value=16 Score=33.86 Aligned_cols=68 Identities=19% Similarity=0.179 Sum_probs=42.0
Q ss_pred CcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCCCCC
Q psy12090 103 KGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPKVSD 177 (371)
Q Consensus 103 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~~~e 177 (371)
.|++..-..+.+.+.+.|++.+++.....=++.=||||| +++..++-.|+...++..+++|+ .|..++
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~~~tfg---~PrvGn 194 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDPLVVTLG---QPIVGN 194 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCCEEEEES---CCCCBB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCceEEeeC---CCCccC
Confidence 355444455667777788888877655444455589965 46777777777776554444443 444444
No 30
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=36.38 E-value=11 Score=30.65 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=20.1
Q ss_pred HHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 115 AVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 115 ~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
...++|+..+++.| =+|++++.+| |||
T Consensus 44 ~~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 34466777777777 3899999999 554
No 31
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=35.66 E-value=14 Score=30.01 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=21.7
Q ss_pred HHHHHHHHHhhhcCCCCcceEEeecCCCc
Q psy12090 115 AVLDVVRKEAESCDCLQGFQLTHSLGGGT 143 (371)
Q Consensus 115 ~~~d~ir~~~E~cD~lqgf~i~~sl~GGT 143 (371)
...++|+..+++.|.=+|++++.++ |||
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3446677777888877899999999 554
No 32
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=35.52 E-value=25 Score=26.88 Aligned_cols=53 Identities=21% Similarity=0.404 Sum_probs=38.0
Q ss_pred eccchHHHHHHHH-------HHHhHhhhcccccceeccccCCC--ChhhHHHHHHHHHHHHHHHHHH
Q psy12090 293 IGNTTAIQELFRR-------ISDQFDSMYKRKAFLHWYLGEGM--DEMEFTEAASNVLDLISEYQQY 350 (371)
Q Consensus 293 l~Nst~i~~~l~~-------~~~~~~~m~~krAflH~Y~~~Gm--ee~eF~ea~~~l~~l~~~Y~~~ 350 (371)
++|-++|..+|.. +++.-..+-.+|.|. ||+ .-..+.||+..|..|.+++++=
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888877774 445555566666443 466 3567899999999999998763
No 33
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=34.84 E-value=16 Score=31.30 Aligned_cols=50 Identities=8% Similarity=0.066 Sum_probs=30.3
Q ss_pred HHHHHHHHhH--hhhcccccceeccccC---CCChhhHHHHHHHHHHHHHHHHHH
Q psy12090 301 ELFRRISDQF--DSMYKRKAFLHWYLGE---GMDEMEFTEAASNVLDLISEYQQY 350 (371)
Q Consensus 301 ~~l~~~~~~~--~~m~~krAflH~Y~~~---Gmee~eF~ea~~~l~~l~~~Y~~~ 350 (371)
..|-.++..+ ..+..-.|++.||.+. ..+......++..+...+.=-++.
T Consensus 106 ~~~~~IL~~LYd~DIleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI~WL~eA 160 (177)
T 2ful_A 106 PLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLETA 160 (177)
T ss_dssp GGHHHHHHHHHHTTSSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHHHHHHHC
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHcc
Confidence 3344444444 3577888999999763 245444555666666666555555
No 34
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=34.31 E-value=29 Score=28.25 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhh--cCCCCcceEEeecCCCcccCchHHH
Q psy12090 113 VDAVLDVVRKEAES--CDCLQGFQLTHSLGGGTGSGMGTLM 151 (371)
Q Consensus 113 ~~~~~d~ir~~~E~--cD~lqgf~i~~sl~GGTGSG~~s~l 151 (371)
.+++.+++++.+++ .|.-+|++++.++ ||=+-++..+
T Consensus 44 ~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l 82 (139)
T 3gdw_A 44 VQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNML 82 (139)
T ss_dssp HHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHH
Confidence 56788889999988 7788999999999 5543444333
No 35
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=34.16 E-value=46 Score=31.25 Aligned_cols=96 Identities=9% Similarity=0.130 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .+|-.+++=+-.|... ..|.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTD--TL-EESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 4567777788888877653 4689999999664 42 445666665544 4555566667778653 356555555555
Q ss_pred HHHHHHhhccCeeeEecchHHH
Q psy12090 187 LSIHQLVENTDETFCIDNEALY 208 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~L~ 208 (371)
..-..-...--.|+++=|+.++
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~ 161 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIF 161 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEE
T ss_pred HHHhCcccCCCeEEEEECCEEe
Confidence 4332211111245555455554
No 36
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=31.85 E-value=31 Score=31.34 Aligned_cols=53 Identities=17% Similarity=0.284 Sum_probs=35.8
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhh
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREE 158 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~ 158 (371)
.+|++..-..+.+.+.+.|++..++.....=++.=|||||+ ++..++-.|+..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 45666555566677777888887776655556667899755 466666666654
No 37
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=30.41 E-value=22 Score=32.01 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=33.9
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHh
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIRE 157 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d 157 (371)
.+|++..-..+.+.+.+.|++.+++.....=++.=|||||+ ++..++-.|+.
T Consensus 97 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 97 HGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 34554444456677777788887776555556666899754 56777767764
No 38
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=28.47 E-value=22 Score=32.14 Aligned_cols=53 Identities=19% Similarity=0.242 Sum_probs=34.3
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhh
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREE 158 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~ 158 (371)
.+|++..-..+.+++.+.+++..++.....=+++-|||||+ ++..++..++..
T Consensus 110 h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGGa----lA~l~a~~l~~~ 162 (269)
T 1tib_A 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGA----LATVAGADLRGN 162 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHH----HHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHHH----HHHHHHHHHHhc
Confidence 34555444556667777777777766555556777999644 566777666654
No 39
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=28.43 E-value=29 Score=32.47 Aligned_cols=62 Identities=23% Similarity=0.250 Sum_probs=38.4
Q ss_pred CCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEE
Q psy12090 102 AKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTF 167 (371)
Q Consensus 102 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~ 167 (371)
..|++..-..+.+.+.+.|++.+++.....=++.-|||||+ ++...+-.|+...+...+++|
T Consensus 108 H~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~~~v~~~TF 169 (319)
T 3ngm_A 108 HSGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGGTPLDIYTY 169 (319)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTTCCCCEEEE
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcCCCceeeec
Confidence 34555444556677777788877766555545666999754 566666677665444333333
No 40
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=27.44 E-value=76 Score=29.68 Aligned_cols=96 Identities=11% Similarity=0.092 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .+|-.+++=+-.|... ..|.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTD--TV-EESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCST--TH-HHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4567777888888877754 4689999999664 42 445666665544 4554566667778653 346555555555
Q ss_pred HHHHHHhhccCeeeEecchHHH
Q psy12090 187 LSIHQLVENTDETFCIDNEALY 208 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~L~ 208 (371)
..-..-...--.|+++=|+.++
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~ 161 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIG 161 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEE
T ss_pred HHHhCcCCCCCceEEEECCEEe
Confidence 4332211111245555455554
No 41
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=27.05 E-value=1.2e+02 Score=26.96 Aligned_cols=55 Identities=22% Similarity=0.326 Sum_probs=32.5
Q ss_pred HHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCC
Q psy12090 118 DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSP 173 (371)
Q Consensus 118 d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~ 173 (371)
+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|=|++
T Consensus 38 ~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S~ 92 (292)
T 2aot_A 38 KKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPSA 92 (292)
T ss_dssp HTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSCH
T ss_pred HhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCCH
Confidence 345555544432222235668988886 4566688888888877644345665553
No 42
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=26.51 E-value=75 Score=29.71 Aligned_cols=45 Identities=24% Similarity=0.451 Sum_probs=32.0
Q ss_pred HHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEe
Q psy12090 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSI 169 (371)
Q Consensus 120 ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v 169 (371)
++..++.++.+.+..-+-++|||||. ++..|...||......+-+
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~-----~~~~l~~~~p~~~~~~~D~ 233 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGA-----TVAAIAAHYPTIKGVNFDL 233 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSH-----HHHHHHHHCTTCEEEEEEC
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCH-----HHHHHHHHCCCCeEEEecC
Confidence 45667777778888889999999872 4555666788876554444
No 43
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=25.46 E-value=79 Score=29.59 Aligned_cols=45 Identities=29% Similarity=0.512 Sum_probs=31.8
Q ss_pred HHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEe
Q psy12090 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSI 169 (371)
Q Consensus 120 ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v 169 (371)
++..++.++.+.+..-+-++|||||. ++..|...||......+-+
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~-----~~~~l~~~~p~~~~~~~D~ 235 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGA-----VASMIVAKYPSINAINFDL 235 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSH-----HHHHHHHHCTTCEEEEEEC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCH-----HHHHHHHhCCCCEEEEEeh
Confidence 35566777767888889999999872 4555667788876655544
No 44
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=24.72 E-value=17 Score=20.25 Aligned_cols=8 Identities=75% Similarity=1.298 Sum_probs=4.4
Q ss_pred CcccCchH
Q psy12090 142 GTGSGMGT 149 (371)
Q Consensus 142 GTGSG~~s 149 (371)
|||||.|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 55555554
No 45
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=24.58 E-value=83 Score=29.41 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=55.8
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .+|-.+++=+-.|... ..|.....++++
T Consensus 63 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 63 MTGKVWLKLAKRVNELLAQ-KETEAVIITHGTD--TM-EETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4567777888888887754 5689999999664 42 445666665544 4454566667778653 345555555555
Q ss_pred HHHHHHhhccCeeeEecchHHH
Q psy12090 187 LSIHQLVENTDETFCIDNEALY 208 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~L~ 208 (371)
..-..-...--.|+++=|+.++
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~ 159 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIH 159 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEE
T ss_pred HHHhCcccCCCeEEEEECCEEe
Confidence 3322111011145555455554
No 46
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=22.41 E-value=1e+02 Score=30.16 Aligned_cols=91 Identities=12% Similarity=0.038 Sum_probs=55.4
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.++ +..+||+|+|+.. |= -.++..|..+-+..++-.+++=+-.|... ..|.....++++
T Consensus 149 mtp~~w~~La~~I~~~~~--~~~DG~VItHGTD--TM-eeTA~~Lsl~l~~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 223 (438)
T 1zq1_A 149 MKPKHWVKIAHEVAKALN--SGDYGVVVAHGTD--TM-GYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSV 223 (438)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCSEEEEECCSS--SH-HHHHHHHHHHEESCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc--cCCCeEEEecCch--hH-HHHHHHHHHHHhCCCCCEEEeCCCCCCCCCCcchHHHHHHHH
Confidence 345667777888888776 3689999999664 42 45666666655445555667777788753 356555555555
Q ss_pred HHHHHHhhccCeeeEecchH
Q psy12090 187 LSIHQLVENTDETFCIDNEA 206 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~ 206 (371)
..-. ...+-..++| |+.
T Consensus 224 ~~A~--~~~~GV~Vvf-n~~ 240 (438)
T 1zq1_A 224 RMAT--SEVAEVMVVM-HGE 240 (438)
T ss_dssp HHHT--SSBCSEEEEE-ESS
T ss_pred HHHc--CCCCCeEEEE-CCc
Confidence 4332 2334344445 444
No 47
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=21.90 E-value=75 Score=28.41 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=31.9
Q ss_pred cCCCcccccchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHH
Q psy12090 100 NWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKI 155 (371)
Q Consensus 100 nwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l 155 (371)
....|++..-..+.+.+.+.|++.+++.....=+++=|||||+ ++..++-.|
T Consensus 106 ~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGga----lA~l~a~~l 157 (269)
T 1tgl_A 106 KVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGA----TALLCALDL 157 (269)
T ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHH----HHHHHHHHH
Confidence 3345555444556667777777777665444445666899755 556666666
No 48
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=21.30 E-value=1.8e+02 Score=27.41 Aligned_cols=93 Identities=19% Similarity=0.184 Sum_probs=57.1
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.++ ..+||+|+|+.. |= --++..|..+-+..+|-.+++=+-.|... ..|.....++++
T Consensus 83 mt~~~w~~la~~I~~~~~---~~dG~VItHGTD--Tm-eeTA~~Ls~~l~~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 156 (358)
T 2him_A 83 MTPEDWQHIAEDIKAHYD---DYDGFVILHGTD--TM-AYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNAL 156 (358)
T ss_dssp CCHHHHHHHHHHHHHHGG---GCSEEEEECCST--TH-HHHHHHHHHHEETCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh---cCCeEEEecCch--HH-HHHHHHHHHHHhcCCCCEEEeCCCCCCcCCCcchHHHHHHHH
Confidence 456677778888887765 478999999664 42 44666666654445555667777888753 356655556665
Q ss_pred HHHHHHhhccCeeeEecchHHH
Q psy12090 187 LSIHQLVENTDETFCIDNEALY 208 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~L~ 208 (371)
..-..- + +-.|+++=|+.++
T Consensus 157 ~~A~~~-~-~~GV~V~fn~~i~ 176 (358)
T 2him_A 157 YVAANY-P-INEVTLFFNNRLY 176 (358)
T ss_dssp HHHHHS-C-CSSEEEEETTEEE
T ss_pred HHHhCC-C-CCCeEEEECCEEe
Confidence 433332 1 2345555566654
No 49
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=21.00 E-value=1.2e+02 Score=28.22 Aligned_cols=94 Identities=13% Similarity=0.203 Sum_probs=55.2
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.+++. +||+|+|+.. |= --++..+..+- ..+|-.+++=+-.|... ..|.....++++
T Consensus 61 mt~~~w~~la~~I~~~~~~~---dG~VItHGTD--Tm-eeTA~~Ls~~l-~~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 133 (326)
T 1nns_A 61 MNDNVWLTLAKKINTDCDKT---DGFVITHGTD--TM-EETAYFLDLTV-KCDKPVVMVGAMRPSTSMSADGPFNLYNAV 133 (326)
T ss_dssp CCHHHHHHHHHHHHHHGGGC---SEEEEECCSS--SH-HHHHHHHHHHC-CCCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhcC---CcEEEEcCch--hH-HHHHHHHHHhc-CCCCCEEEeCCCCCCcCCCCchHHHHHHHH
Confidence 45677888888888877653 8999999664 42 44555665554 34555566667778753 356555555555
Q ss_pred HHHHHHhhccCeeeEecchHHH
Q psy12090 187 LSIHQLVENTDETFCIDNEALY 208 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~L~ 208 (371)
..-..-...--.|+++=|+.++
T Consensus 134 ~~A~~~~~~~~GV~v~fn~~i~ 155 (326)
T 1nns_A 134 VTAADKASANRGVLVVMNDTVL 155 (326)
T ss_dssp HHHHCGGGTTSCSEEEETTEEE
T ss_pred HHHcCcccCCCceEEEECCEEe
Confidence 4332211111244444455554
No 50
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=20.83 E-value=1.3e+02 Score=29.28 Aligned_cols=90 Identities=18% Similarity=0.137 Sum_probs=54.9
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.++ +..+||+|+|+.. |= --++..|..+- ..++-.+++=+-.|... ..|.....++++
T Consensus 148 mtp~~w~~La~~I~~~~~--~~~DG~VItHGTD--TM-eeTA~~Lsl~l-~~~KPVVlTGAqrP~~~~~sDg~~NL~~Av 221 (435)
T 2d6f_A 148 MKPEYWVETARAVYGEIK--DGADGVVVAHGTD--TM-HYTSAALSFML-RTPVPVVFTGAQRSSDRPSSDASLNIQCSV 221 (435)
T ss_dssp CCHHHHHHHHHHHHHHHH--TTCSEEEEECCTT--TH-HHHHHHHHHHE-ECSSCEEEECCSSCTTSTTCTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhc--cCCCeEEEEcCcc--hH-HHHHHHHHHHh-CCCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 345667778888888776 3689999999664 42 44555565554 45555667777888753 356655556555
Q ss_pred HHHHHHhhccCeeeEecchH
Q psy12090 187 LSIHQLVENTDETFCIDNEA 206 (371)
Q Consensus 187 lsl~~l~e~sd~~i~~dN~~ 206 (371)
..-.. ..+-..++| |+.
T Consensus 222 ~~A~~--~~~GV~Vvf-n~~ 238 (435)
T 2d6f_A 222 RAATS--EIAEVTVCM-HAT 238 (435)
T ss_dssp HHHHS--SCCSEEEEE-ESS
T ss_pred HHHcC--CCCCeEEEE-CCc
Confidence 43322 334344445 444
No 51
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=20.70 E-value=82 Score=26.49 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHhHhh-hcccc-c-------ceeccccCCCChhhHHHHHHHHHHHHHHHHHHhhccc
Q psy12090 297 TAIQELFRRISDQFDS-MYKRK-A-------FLHWYLGEGMDEMEFTEAASNVLDLISEYQQYQEAAV 355 (371)
Q Consensus 297 t~i~~~l~~~~~~~~~-m~~kr-A-------flH~Y~~~Gmee~eF~ea~~~l~~l~~~Y~~~~~~~~ 355 (371)
.....++.++++-=+. .+--| | .++...-.+|+.+||..|...|..++++|.+.-...+
T Consensus 86 ~~~~~l~~~LLE~N~~~t~~arFaI~~n~V~~v~~r~ls~Ld~~E~~~aIt~V~~lAD~~Dd~L~~~f 153 (163)
T 2plg_A 86 ADELALYRKLLTLNWLTTFEAHFAIAEEQVQVVASRTLGGITAGEISRLITIVATLADDYDDALRAEF 153 (163)
T ss_dssp TTHHHHHHHHHHHTTTTTTTCEEEEETTEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhccccccceEEEEECCEEEEEEEEEcccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777777764433 22211 1 2344455789999999999999999999998755543
No 52
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=20.32 E-value=81 Score=29.52 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=47.8
Q ss_pred cchhhHHHHHHHHHHHhhhcCCCCcceEEeecCCCcccCchHHHHHHHHhhCCCceeeEEEeeCCCC-CCCccchhhHHH
Q psy12090 108 EGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSIVPSPK-VSDTVVEPYNAT 186 (371)
Q Consensus 108 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGTGSG~~s~lle~l~d~yp~~~i~~~~v~P~~~-~~e~~~~~yN~~ 186 (371)
...+.+..+.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .+|-.+++=+-.|... ..|.....++++
T Consensus 62 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 136 (331)
T 1agx_A 62 ITDKELLSLARQVNDLVKK-PSVNGVVITHGTD--TM-EETAFFLNLVVH-TDKPIVLVGSMRPSTALSADGPLNLYSAV 136 (331)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCGG--GH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCchhHHHHHHHH
Confidence 4567777888888887754 5689999999654 42 445666665544 4454566667778653 345555555554
Q ss_pred H
Q psy12090 187 L 187 (371)
Q Consensus 187 l 187 (371)
.
T Consensus 137 ~ 137 (331)
T 1agx_A 137 A 137 (331)
T ss_dssp H
T ss_pred H
Confidence 3
No 53
>3kl4_B DPAP B, YSCV, signal peptide of yeast dipeptidyl aminopeptidase; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Saccharomyces cerevisiae}
Probab=20.27 E-value=16 Score=22.59 Aligned_cols=10 Identities=50% Similarity=1.029 Sum_probs=5.9
Q ss_pred CcccCchHHH
Q psy12090 142 GTGSGMGTLM 151 (371)
Q Consensus 142 GTGSG~~s~l 151 (371)
|+|||.|+.+
T Consensus 4 gsgsgsgskl 13 (42)
T 3kl4_B 4 GSGSGSGSKL 13 (42)
T ss_pred CCCCCCccce
Confidence 5566666654
No 54
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=20.19 E-value=45 Score=29.33 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=17.3
Q ss_pred cCCCcccCchHHHHHHHHhh
Q psy12090 139 LGGGTGSGMGTLMISKIREE 158 (371)
Q Consensus 139 l~GGTGSG~~s~lle~l~d~ 158 (371)
+-||+|+|+|..+++.|..+
T Consensus 27 ITGasg~GIG~~~a~~l~~~ 46 (266)
T 3o38_A 27 VTAAAGTGIGSTTARRALLE 46 (266)
T ss_dssp ESSCSSSSHHHHHHHHHHHT
T ss_pred EECCCCCchHHHHHHHHHHC
Confidence 45788899999999999887
Done!