Query psy12093
Match_columns 118
No_of_seqs 103 out of 339
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 18:34:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y38_A Laminin subunit alpha-5 100.0 6.5E-30 2.2E-34 213.7 6.8 103 6-113 125-235 (403)
2 4aqt_A Laminin subunit gamma-1 100.0 7.5E-29 2.6E-33 205.2 7.3 104 5-114 118-229 (375)
3 4aqs_A Laminin subunit beta-1; 99.9 1.5E-28 5.3E-33 206.8 8.4 90 6-104 121-211 (525)
4 3zyj_B Netrin-G1; cell adhesio 99.9 1E-27 3.5E-32 201.7 6.2 102 6-114 150-273 (426)
5 3tbd_A Netrin-G2, laminet-2; l 99.9 4.4E-26 1.5E-30 187.2 6.4 98 6-110 122-235 (338)
6 2ydt_A EXO-1,5-alpha-L-arabino 51.8 14 0.00048 29.5 3.9 19 16-36 56-74 (367)
7 2jkb_A Sialidase B; intramolec 42.4 9.9 0.00034 33.1 1.7 23 14-38 263-285 (686)
8 3a72_A EXO-arabinanase; arabin 38.0 32 0.0011 27.2 4.0 21 16-38 51-71 (355)
9 1w0p_A Sialidase; hydrolase, n 33.1 23 0.0008 31.4 2.6 22 16-39 259-280 (781)
10 2sli_A Intramolecular trans-si 32.8 17 0.0006 31.5 1.7 21 14-36 242-262 (679)
11 2w20_A Sialidase A; secreted, 32.4 21 0.0007 29.2 2.0 21 17-39 58-78 (471)
12 3a72_A EXO-arabinanase; arabin 32.2 27 0.00091 27.7 2.6 20 16-37 115-134 (355)
13 2ydt_A EXO-1,5-alpha-L-arabino 30.2 29 0.001 27.7 2.6 20 15-36 119-138 (367)
14 2bf6_A Sialidase, EXO-alpha-si 25.4 31 0.0011 27.7 1.9 23 16-40 56-78 (449)
15 1w8o_A Bacterial sialidase; 3D 20.2 45 0.0015 27.3 1.9 22 16-39 52-73 (601)
No 1
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=99.96 E-value=6.5e-30 Score=213.66 Aligned_cols=103 Identities=23% Similarity=0.380 Sum_probs=87.8
Q ss_pred eccCCCCCcceEEEeecCCCCCCceeeeeeeccCCccchHhhhCCCCCCCCCCCCCCCceEEecCCCCCccCCCCeEEEE
Q psy12093 6 VGNKDPGTTEVFVTSRFSHGIQHWVINSWQYFAVSDDECWTQYGILASPANPLFLSDSDVICTSHYSKLKPLEGGELTKF 85 (118)
Q Consensus 6 ~~~~~~~~~e~~i~eRS~d~~~G~tW~PwQYFA~s~~dC~~~FG~~~~~~~~~~~~ddeViCTs~YS~i~Pl~~GeV~fs 85 (118)
|.|+.-.||++||||||.|+ |+||+||||||.+++||+++||+++ ...++++++||||++||++.|+++|||+|+
T Consensus 125 l~F~~spRP~~m~ierS~D~--G~tW~p~qyfa~~~~dC~~~fg~~~---~~~~~~~~~viCt~~ys~~~P~~~g~v~f~ 199 (403)
T 2y38_A 125 IKFANSPRPDLWVLERSTDF--GHTYQPWQFFASSKRDCLERFGPRT---LERITQDDDVICTTEYSRIVPLENGEIVVS 199 (403)
T ss_dssp EEECSSCCCSEEEEEEESSS--SSSEEEEEEECSSHHHHHHHTCTTT---TSCCCSTTCCCEECSTTCSSSCSSCEEEEE
T ss_pred EEecCCCCCCeEEEEeccCC--CCCccceecccCCccchhhhcCCCC---CCCCCCCCceeeeccCCCCcCCCCCeEEEE
Confidence 56753468999999999999 9999999999988889999999863 334577889999999999999999999999
Q ss_pred eeCCCCCCCC--CccccceeE------EeeeeeEEe
Q psy12093 86 KTKAYLHRDT--NVGKLSSYT------WNQTDLISV 113 (118)
Q Consensus 86 ~L~gRps~~d--~s~~Lqd~~------~~~~~~~~~ 113 (118)
+|+|||++.+ +|++||+|+ .+|++++++
T Consensus 200 ~l~gRP~~~~~~~s~~lq~~~~aT~iRi~~~~~~t~ 235 (403)
T 2y38_A 200 LVNGRPGALNFSYSPLLRDFTKATNIRLRFLRTNTL 235 (403)
T ss_dssp SSSSSGGGTTGGGCHHHHHHHEEEEEEEEEEECCCC
T ss_pred ecCCCCCcccCCcCHHHHhhhccceEEEEEEecCcc
Confidence 9999999986 599999986 335555544
No 2
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=99.95 E-value=7.5e-29 Score=205.22 Aligned_cols=104 Identities=16% Similarity=0.226 Sum_probs=89.7
Q ss_pred eeccCCCCCcceEEEeecCCCCCCceeeeeeeccCCccchHhhhCCCCCCCCCCCCCCCceEEecCCCCCccCCCCeEEE
Q psy12093 5 YVGNKDPGTTEVFVTSRFSHGIQHWVINSWQYFAVSDDECWTQYGILASPANPLFLSDSDVICTSHYSKLKPLEGGELTK 84 (118)
Q Consensus 5 ~~~~~~~~~~e~~i~eRS~d~~~G~tW~PwQYFA~s~~dC~~~FG~~~~~~~~~~~~ddeViCTs~YS~i~Pl~~GeV~f 84 (118)
.|+|++| ||++|+||||.|+ |+||+|||||| .+|.+.||+++........++++||||++||++.|+++|||+|
T Consensus 118 ~i~F~~~-rP~~m~Iers~d~--G~tw~p~qyfa---~~C~~~f~~~~~~~~~~~~~~~~viCt~~ys~~~p~~~g~v~~ 191 (375)
T 4aqt_A 118 RLKFHTS-RPESFAIYKRTRE--DGPWIPYQYYS---GSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAF 191 (375)
T ss_dssp EEEESSS-CCSEEEEEEESSS--SSCCEEEEEEE---TTHHHHHSCCTTCCCCTTSCTTCCEEESTTCSCCSSSCEEEEE
T ss_pred EEEecCC-CCCcEEEEEecCC--CCCccceeeee---cchhHhcCCCCCCCcCCCCCCCeeEeCCcCCCCcCCcCCeEEE
Confidence 4689987 8999999999999 99999999999 5799999998766655567889999999999999999999999
Q ss_pred EeeCCCCCCCC--CccccceeEEe------eeeeEEee
Q psy12093 85 FKTKAYLHRDT--NVGKLSSYTWN------QTDLISVG 114 (118)
Q Consensus 85 s~L~gRps~~d--~s~~Lqd~~~~------~~~~~~~~ 114 (118)
++|+|||++.+ +|++||+|+-. |++|+++|
T Consensus 192 ~~l~~rp~~~~~~~s~~lq~~~~at~iRi~l~~~~~~~ 229 (375)
T 4aqt_A 192 STLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFG 229 (375)
T ss_dssp ETTTTCTTGGGGGGCHHHHHHTEEEEEEEEEEECCCCS
T ss_pred EeccCCCCcccCCcCHHHhhhhhheeeeeeecccccCc
Confidence 99999999984 68999988643 55555554
No 3
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.95 E-value=1.5e-28 Score=206.80 Aligned_cols=90 Identities=18% Similarity=0.266 Sum_probs=81.1
Q ss_pred eccCCCCCcceEEEeecCCCCCCceeeeeeeccCCccchHhhhCCCCCCCCCCCCCCCceEEecCCCCCccCCCCeEEEE
Q psy12093 6 VGNKDPGTTEVFVTSRFSHGIQHWVINSWQYFAVSDDECWTQYGILASPANPLFLSDSDVICTSHYSKLKPLEGGELTKF 85 (118)
Q Consensus 6 ~~~~~~~~~e~~i~eRS~d~~~G~tW~PwQYFA~s~~dC~~~FG~~~~~~~~~~~~ddeViCTs~YS~i~Pl~~GeV~fs 85 (118)
|+|++| ||++||||||.|+ |+||+|||||| +||++.||+++ ...+.++++||||++||++.|+++|||+|+
T Consensus 121 ~~f~s~-rP~~~~ieks~d~--g~tw~p~qy~a---~~C~~~f~~~~---~~~~~~~~~v~Ct~~~s~~~p~~~g~v~~~ 191 (525)
T 4aqs_A 121 MTFKTF-RPAAMLIERSSDF--GKAWGVYRYFA---YDCESSFPGIS---TGPMKKVDDIICDSRYSDIEPSTEGEVIFR 191 (525)
T ss_dssp EEESSC-CCSEEEEEEESST--TSSCEEEEEEE---SSTTTTSSSSC---CSCCSSTTCCCEECTTCCSCSTTTCEEEEE
T ss_pred EEEECC-CCCeEEEEEecCC--CCCCcceeeeh---hhhhhhcCCCC---CCCCCCCCcceecccCCCCCCCCCCeEEEE
Confidence 678876 9999999999999 99999999999 58999999864 233577889999999999999999999999
Q ss_pred eeCCCCCCCC-CccccceeE
Q psy12093 86 KTKAYLHRDT-NVGKLSSYT 104 (118)
Q Consensus 86 ~L~gRps~~d-~s~~Lqd~~ 104 (118)
+|++||++.+ +|++||+|+
T Consensus 192 ~~~~~~~~~~~~s~~l~~~~ 211 (525)
T 4aqs_A 192 ALDPAFKIEDPYSPRIQNLL 211 (525)
T ss_dssp SSCSSSCCSCTTSHHHHHHH
T ss_pred ecCCCcccCCCCChhhhhhh
Confidence 9999999986 699999985
No 4
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1e-27 Score=201.65 Aligned_cols=102 Identities=11% Similarity=0.099 Sum_probs=83.3
Q ss_pred eccCCCCCcceEEEeecCCCCCCceeeeeeeccCCccchHhhhCCCCCCCC-CCCCCCCceEEecCCCCCccCCCCeEEE
Q psy12093 6 VGNKDPGTTEVFVTSRFSHGIQHWVINSWQYFAVSDDECWTQYGILASPAN-PLFLSDSDVICTSHYSKLKPLEGGELTK 84 (118)
Q Consensus 6 ~~~~~~~~~e~~i~eRS~d~~~G~tW~PwQYFA~s~~dC~~~FG~~~~~~~-~~~~~ddeViCTs~YS~i~Pl~~GeV~f 84 (118)
++|++| ||++||||||.|+ |+||+|||||| +||.++|||++.... ....++++||||++||++.|+++|||+|
T Consensus 150 l~F~sp-RP~am~ierS~D~--G~tW~p~qYfA---~dC~~~Fg~~~~~~~~~~~~~~~~viCt~~yS~~~P~~~GeV~f 223 (426)
T 3zyj_B 150 ITFESG-RPDQMILEKSLDY--GRTWQPYQYYA---TDCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHF 223 (426)
T ss_dssp EEESSC-CCSEEEEEEESST--TSSCEEEEEEE---SSHHHHTSCCCCCGGGCCSSCSSCCCEECTTTCSSSTTTTEEEE
T ss_pred eecCCC-CCCeEEEEeccCC--CCCceehHHHh---hhhHHhcCCCcccccccCCCCCCcceeCCCCCCCCCCCCCEEEE
Confidence 789987 8999999999999 99999999999 589999999764322 2224568999999999999999999999
Q ss_pred Ee------eCCCCCCCC---------CccccceeE------EeeeeeEEee
Q psy12093 85 FK------TKAYLHRDT---------NVGKLSSYT------WNQTDLISVG 114 (118)
Q Consensus 85 s~------L~gRps~~d---------~s~~Lqd~~------~~~~~~~~~~ 114 (118)
++ ++| |++.+ +|++||||+ .+|+++++.|
T Consensus 224 ~~~~~f~~~~g-P~~~~~~~~y~~~~~S~~Lqd~~taT~iRi~l~r~~t~~ 273 (426)
T 3zyj_B 224 EIKDRFAFFAG-PRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGE 273 (426)
T ss_dssp CSHHHHHHHHC-SSCCCHHHHHHHHHHCHHHHHHSEEEEEEEEEEECCCSS
T ss_pred EeccccccccC-CCcccccccccccccCHHHHhhhcceeEEEEEeccccCC
Confidence 96 346 88764 488999986 3366666655
No 5
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=99.92 E-value=4.4e-26 Score=187.18 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=76.2
Q ss_pred eccCCCCCcceEEEeecCCCCCCceeeeeeeccCCccchHhhhCCCCCCCC-CCCCCCCceEEecCCCCCccCC-CCeEE
Q psy12093 6 VGNKDPGTTEVFVTSRFSHGIQHWVINSWQYFAVSDDECWTQYGILASPAN-PLFLSDSDVICTSHYSKLKPLE-GGELT 83 (118)
Q Consensus 6 ~~~~~~~~~e~~i~eRS~d~~~G~tW~PwQYFA~s~~dC~~~FG~~~~~~~-~~~~~ddeViCTs~YS~i~Pl~-~GeV~ 83 (118)
++|++| ||++||||||.|+ |+||+|||||| +||.+.|||++.... ....++++||||++||++.|++ +|+|+
T Consensus 122 l~F~sp-RP~sm~ierS~D~--G~tW~P~QYfA---~dC~~~Fg~~~~~~~~~~~~~~~eviCt~~yS~~~P~~~gg~v~ 195 (338)
T 3tbd_A 122 MTFEYG-RPTVMVLEKSLDN--GRTWQPYQFYA---EDCMEAFGMSARRARDMSSSSAHRVLCTEEYSRWAGSKKEKHVR 195 (338)
T ss_dssp EEESSC-CCSEEEEEEESST--TSSCEEEEEEE---SSHHHHHSCCBCCGGGCCGGGTTCCCEECTTTTTTTSSCCCEEE
T ss_pred eecCCC-CCCeEEEEeccCC--CCCceeehhhh---hhhHHhcCCCCccccCccCCCCCccEECCCCCCCCCCCCCceEE
Confidence 679987 8999999999999 99999999999 589999999864321 2235789999999999999955 56777
Q ss_pred EEeeC-----CCCCCCC---------CccccceeEEeeeee
Q psy12093 84 KFKTK-----AYLHRDT---------NVGKLSSYTWNQTDL 110 (118)
Q Consensus 84 fs~L~-----gRps~~d---------~s~~Lqd~~~~~~~~ 110 (118)
|+++. ..|++.+ +|++||||+= +|+|
T Consensus 196 f~v~~r~~~~~gP~~~~~~~~y~~~~~s~~Lqd~~t-aT~i 235 (338)
T 3tbd_A 196 FEVRDRFAIFAGPDLRNMDNLYTRLESAKGLKEFFT-LTDL 235 (338)
T ss_dssp ECSHHHHHHHHTTTTCCHHHHHHHHHHSTTHHHHTE-EEEE
T ss_pred EEecccccccCCCccccccccccccccCHHHHHhhh-heee
Confidence 76542 1277664 3789998842 4444
No 6
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=51.83 E-value=14 Score=29.55 Aligned_cols=19 Identities=11% Similarity=-0.022 Sum_probs=16.2
Q ss_pred eEEEeecCCCCCCceeeeeee
Q psy12093 16 VFVTSRFSHGIQHWVINSWQY 36 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQY 36 (118)
.+.++||.|+ |+||+.-+.
T Consensus 56 ~~~v~rS~Dg--G~TW~~~~~ 74 (367)
T 2ydt_A 56 WFPIVKSKDG--GKTWKEISK 74 (367)
T ss_dssp CEEEEEESST--TSSCEEEEE
T ss_pred EEEEEEECCC--CcCcCcCcc
Confidence 4578899999 999999765
No 7
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=42.41 E-value=9.9 Score=33.10 Aligned_cols=23 Identities=9% Similarity=-0.181 Sum_probs=19.3
Q ss_pred cceEEEeecCCCCCCceeeeeeecc
Q psy12093 14 TEVFVTSRFSHGIQHWVINSWQYFA 38 (118)
Q Consensus 14 ~e~~i~eRS~d~~~G~tW~PwQYFA 38 (118)
.-.+++.||.|+ |+||.|-|.-+
T Consensus 263 ~i~iv~rRS~Dg--G~TWs~~~~i~ 285 (686)
T 2jkb_A 263 KINIATSYSDDN--GKTWSEPIFAM 285 (686)
T ss_dssp CEEEEEEEESST--TSSCCCCEEEE
T ss_pred CeEEEEEEcCCC--CCcCCCCEEcc
Confidence 345699999999 99999999654
No 8
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=38.00 E-value=32 Score=27.21 Aligned_cols=21 Identities=14% Similarity=-0.064 Sum_probs=16.6
Q ss_pred eEEEeecCCCCCCceeeeeeecc
Q psy12093 16 VFVTSRFSHGIQHWVINSWQYFA 38 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQYFA 38 (118)
.+.++||.|+ |+||+.-+.-.
T Consensus 51 ~~~v~rS~Dg--G~TW~~~~~v~ 71 (355)
T 3a72_A 51 YFPIYRSKDH--GKTWNEISRVH 71 (355)
T ss_dssp CEEEEEESST--TSCCEEEEEEC
T ss_pred eEEEEEEcCC--CcCcCCCcccC
Confidence 3467899999 99999987543
No 9
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=33.13 E-value=23 Score=31.42 Aligned_cols=22 Identities=9% Similarity=-0.006 Sum_probs=19.5
Q ss_pred eEEEeecCCCCCCceeeeeeeccC
Q psy12093 16 VFVTSRFSHGIQHWVINSWQYFAV 39 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQYFA~ 39 (118)
.+++.||.|+ |+||.+-|..+.
T Consensus 259 ~Iv~rRS~Dg--G~TWs~~~~v~~ 280 (781)
T 1w0p_A 259 DIITRTSRDG--GITWDTELNLTE 280 (781)
T ss_dssp EEEEEEESSS--SSSCCCCEESSG
T ss_pred eEEEEEcCCC--CcccCCcEEEec
Confidence 4789999999 999999998873
No 10
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=32.79 E-value=17 Score=31.52 Aligned_cols=21 Identities=5% Similarity=-0.110 Sum_probs=17.5
Q ss_pred cceEEEeecCCCCCCceeeeeee
Q psy12093 14 TEVFVTSRFSHGIQHWVINSWQY 36 (118)
Q Consensus 14 ~e~~i~eRS~d~~~G~tW~PwQY 36 (118)
.-.+++.||.|+ |+||.+-|.
T Consensus 242 ~~~i~~~rS~D~--G~TW~~~~~ 262 (679)
T 2sli_A 242 KINIAFAKSTDG--GNTWSEPTL 262 (679)
T ss_dssp CEEEEEEEESST--TSSCCCCEE
T ss_pred CeEEEEEEECCC--CcCCCCCEE
Confidence 345689999999 999998764
No 11
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=32.39 E-value=21 Score=29.17 Aligned_cols=21 Identities=10% Similarity=-0.065 Sum_probs=18.6
Q ss_pred EEEeecCCCCCCceeeeeeeccC
Q psy12093 17 FVTSRFSHGIQHWVINSWQYFAV 39 (118)
Q Consensus 17 ~i~eRS~d~~~G~tW~PwQYFA~ 39 (118)
+++.||.|+ |+||.+-|..+.
T Consensus 58 i~~rrs~d~--G~tW~~~~~i~~ 78 (471)
T 2w20_A 58 MVIRRSEDN--GKTWGDRVTITN 78 (471)
T ss_dssp EEEEEESST--TSSCCCCEEEEC
T ss_pred EEEEECCCC--CCcCCCCEEeec
Confidence 589999999 999999997764
No 12
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=32.24 E-value=27 Score=27.68 Aligned_cols=20 Identities=5% Similarity=-0.210 Sum_probs=16.4
Q ss_pred eEEEeecCCCCCCceeeeeeec
Q psy12093 16 VFVTSRFSHGIQHWVINSWQYF 37 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQYF 37 (118)
.+.+.||.|+ |+||++..--
T Consensus 115 ~~~v~~S~D~--G~TW~~~~~i 134 (355)
T 3a72_A 115 DIVLYASQDD--GMTWDFVSHI 134 (355)
T ss_dssp EEEEEEESST--TSCCEEEEEE
T ss_pred eEEEEEECCC--CccCccCccc
Confidence 4578999999 9999987653
No 13
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=30.24 E-value=29 Score=27.66 Aligned_cols=20 Identities=0% Similarity=-0.180 Sum_probs=16.2
Q ss_pred ceEEEeecCCCCCCceeeeeee
Q psy12093 15 EVFVTSRFSHGIQHWVINSWQY 36 (118)
Q Consensus 15 e~~i~eRS~d~~~G~tW~PwQY 36 (118)
..+.+.||.|+ |+||++.+-
T Consensus 119 ~~i~v~~S~D~--G~TW~~~~~ 138 (367)
T 2ydt_A 119 TLIEVYASRDK--GYTWEFVSH 138 (367)
T ss_dssp EEEEEEEESSS--SSCCEEEEE
T ss_pred CeEEEEEECCC--CCCCcCCee
Confidence 34578899999 999998764
No 14
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=25.42 E-value=31 Score=27.69 Aligned_cols=23 Identities=13% Similarity=-0.097 Sum_probs=19.7
Q ss_pred eEEEeecCCCCCCceeeeeeeccCC
Q psy12093 16 VFVTSRFSHGIQHWVINSWQYFAVS 40 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQYFA~s 40 (118)
.+++.||.|+ |+||.+-|..+..
T Consensus 56 ~i~~~rS~Dg--G~TWs~~~~v~~~ 78 (449)
T 2bf6_A 56 DTAVRRSEDG--GKTWDEGQIIMDY 78 (449)
T ss_dssp EEEEEEESST--TSSCCCCEEEECC
T ss_pred eEEEEEcCCC--CCCCCCCEEeecC
Confidence 4789999999 9999999877753
No 15
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=20.23 E-value=45 Score=27.26 Aligned_cols=22 Identities=14% Similarity=0.124 Sum_probs=18.6
Q ss_pred eEEEeecCCCCCCceeeeeeeccC
Q psy12093 16 VFVTSRFSHGIQHWVINSWQYFAV 39 (118)
Q Consensus 16 ~~i~eRS~d~~~G~tW~PwQYFA~ 39 (118)
..++.||.|+ |+||.+-+....
T Consensus 52 ~i~~~rS~Dg--G~TW~~~~~l~~ 73 (601)
T 1w8o_A 52 SILQRRSTDG--GRTWGEQQVVSA 73 (601)
T ss_dssp EEEEEEESST--TSSCCCCEEEEC
T ss_pred eEEEEEeCCC--CCCCCCCEEEec
Confidence 4578999999 999999987664
Done!