BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12100
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P96575|YDAB_BACSU Putative acyl--CoA ligase YdaB OS=Bacillus subtilis (strain 168)
GN=ydaB PE=3 SV=2
Length = 503
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
V P ++E +I QI G+ + AVVG+PD L GE PKAF+VK G +TE+++ ++ + +
Sbjct: 411 NVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVKNGGQRITEEDVIAFCKER 468
>sp|Q7F1X5|4CLL5_ORYSJ 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica
GN=4CLL5 PE=2 SV=1
Length = 542
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V P ELE+I+ G+AD AV+ PD +GE+P AF+V++PG +T++++ YV
Sbjct: 444 QVPPAELEHILQSHPGIADAAVIPYPDEEAGELPMAFIVRQPGSNITKEQVMDYV 498
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 9 VAPYKKLAGGVKFLETIPRNPAGKVSPTEL 38
VAPYKK+ V F+ IP++PAGK+ EL
Sbjct: 502 VAPYKKVRR-VAFVTAIPKSPAGKILRREL 530
>sp|Q8RU95|4CLL6_ORYSJ 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica
GN=4CLL6 PE=2 SV=2
Length = 598
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQE----ISSYVE 87
+V P ELE+I+ +AD AVV PD +G++P AFVV++PG LTEQ+ ++ +V
Sbjct: 501 QVPPAELEHILQSRPEIADAAVVPYPDEEAGQLPMAFVVRQPGAYLTEQQVMNCVAKHVA 560
Query: 88 PKKPV 92
P K V
Sbjct: 561 PYKKV 565
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 6 ALSVAPYKKLAGGVKFLETIPRNPAGKVSPTEL 38
A VAPYKK+ V F+ IP++PAGK+ EL
Sbjct: 556 AKHVAPYKKVRR-VAFVNAIPKSPAGKILRREL 587
>sp|P08659|LUCI_PHOPY Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1
Length = 550
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+++ + +V+P ELE+I++Q + D V G+PD +GE+P A VV + G +T
Sbjct: 435 VDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMT 494
Query: 79 EQEISSYV 86
E+EI YV
Sbjct: 495 EKEIVDYV 502
>sp|Q7XXL2|4CLL9_ORYSJ 4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica
GN=4CLL9 PE=2 SV=2
Length = 555
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
+V+P ELE +++ V D AV GVPD +GEVP A VV++ G E E+EI +YV +
Sbjct: 457 QVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAER 514
>sp|Q84P23|4CLL9_ARATH 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9
PE=1 SV=2
Length = 562
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+ + + A +V P ELE I+ V D AVV PD +GE+P AF+V+KPG L
Sbjct: 451 VDRLKELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEIPMAFIVRKPGSNLN 510
Query: 79 EQEISSYV 86
E +I +V
Sbjct: 511 EAQIIDFV 518
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 6 ALSVAPYKKLAGGVKFLETIPRNPAGKVSPTELENI 41
A V PYKK+ V F+ IP+NPAGK+ EL I
Sbjct: 519 AKQVTPYKKVRR-VAFINAIPKNPAGKILRRELTKI 553
>sp|Q01158|LUCI_LUCLA Luciferin 4-monooxygenase OS=Luciola lateralis PE=2 SV=1
Length = 548
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+++ + +V P ELE++++Q + D V GVPD ++GE+P A VV + G +T
Sbjct: 437 VDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPIAGELPGAVVVLEKGKSMT 496
Query: 79 EQEISSYV 86
E+E+ YV
Sbjct: 497 EKEVMDYV 504
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 6 ALSVAPYKKLAGGVKFLETIPRNPAGKVSPTELENII 42
A V+ K+L GGV+F++ +P+ GK+ + I+
Sbjct: 505 ASQVSNAKRLRGGVRFVDEVPKGLTGKIDGKAIREIL 541
>sp|P13129|LUCI_LUCCR Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1
Length = 548
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+++ + +V P ELE++++Q + D V GVPD ++GE+P A VV + G +T
Sbjct: 437 VDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVLESGKNMT 496
Query: 79 EQEISSYV 86
E+E+ YV
Sbjct: 497 EKEVMDYV 504
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 6 ALSVAPYKKLAGGVKFLETIPRNPAGKVSPTELENII 42
A V+ K+L GGV+F++ +P+ GK+ + I+
Sbjct: 505 ASQVSNAKRLRGGVRFVDEVPKGLTGKIDGRAIREIL 541
>sp|Q26304|LUCI_LUCMI Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1
Length = 548
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+++ + +V P ELE++++Q + D V GVPD +GE+P A VV + G +T
Sbjct: 437 VDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTMT 496
Query: 79 EQEISSYVEPK 89
E+EI YV +
Sbjct: 497 EKEIVDYVNSQ 507
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 9 VAPYKKLAGGVKFLETIPRNPAGKVSPTELENII 42
V +K+L GGV+F++ +P+ GK+ + I+
Sbjct: 508 VVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREIL 541
>sp|Q6ETN3|4CL3_ORYSJ Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica
GN=4CL3 PE=2 SV=1
Length = 554
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+ I + +V P ELE +++ + D AVV + D L+GEVP AF+V+ G E+T
Sbjct: 432 VDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVAFIVRTEGSEIT 491
Query: 79 EQEISSYV 86
E EI +V
Sbjct: 492 EDEIKKFV 499
>sp|Q9S777|4CL3_ARATH 4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1
Length = 561
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V P ELE++++ +AD AVV D ++GEVP AFVV+ G ++TE+++ YV
Sbjct: 470 QVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDVKEYV 524
>sp|Q9LU36|4CL4_ARATH 4-coumarate--CoA ligase 4 OS=Arabidopsis thaliana GN=4CL4 PE=1 SV=1
Length = 570
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
+V+P ELE +++ + D AVV + D ++ EVP AFV + G +LTE ++ SYV +
Sbjct: 474 QVAPAELEALLISHPSIDDAAVVAMKDEVADEVPVAFVARSQGSQLTEDDVKSYVNKQ 531
>sp|Q84P25|4CLL2_ARATH 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2
PE=2 SV=2
Length = 565
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ +AD AV+ +PD +G+ P A++V+K G L+E EI +V
Sbjct: 471 QVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIVRKVGSNLSESEIMGFV 525
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 ALSVAPYKKLAGGVKFLETIPRNPAGKVSPTELENI 41
A V+PYKK+ V FL +IP+NP+GK+ EL +
Sbjct: 526 AKQVSPYKKIRK-VTFLASIPKNPSGKILRRELTKL 560
>sp|Q9M0X9|4CLL7_ARATH 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7
PE=1 SV=1
Length = 544
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ + D V+ PD +GEVP AFVV+ P +TEQ+I ++
Sbjct: 450 QVAPAELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQDIQKFI 504
>sp|C8VTR6|Y0074_EMENI Putative acyl-coenzyme A synthetase OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=AN10074 PE=3 SV=1
Length = 554
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGV--PDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
+VSP E+E ++ GVADVAVVG P+ E+P+A+VV K G ++E E+ YV+
Sbjct: 451 QVSPVEIEGFLLTHPGVADVAVVGARDPEAPGNELPRAYVVIKAGSSVSEAELKEYVK 508
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 8 SVAPYKKLAGGVKFLETIPRNPAGKVSPTELENIIMQIAG 47
++A +K+L GGV F++ IP++ +GK+ L + AG
Sbjct: 510 NLAGHKQLRGGVVFIDEIPKSASGKILRRILRDQARSSAG 549
>sp|O24540|4CL_VANPL 4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1
Length = 553
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ ++D AVV + D +GEVP AFVVK G +TE EI ++
Sbjct: 455 QVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFI 509
>sp|O24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1
Length = 542
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ ++D AVV + D +GEVP AFVV+ G +TE E+ ++
Sbjct: 446 QVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFI 500
>sp|Q27757|LUCI_PHOPE Luciferin 4-monooxygenase OS=Photuris pennsylvanica PE=2 SV=2
Length = 545
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 22 LETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQE 81
L+++ + +V+P E+E I++Q + D V G+PD +GE+P A VV + G L EQ
Sbjct: 437 LKSLIKYKGYQVAPAEIEGILLQHPYIVDAGVTGIPDEAAGELPAAGVVVQTGKYLNEQI 496
Query: 82 ISSYVEPK 89
+ ++V +
Sbjct: 497 VQNFVSSQ 504
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 9 VAPYKKLAGGVKFLETIPRNPAGKVSPTELENII 42
V+ K L GGVKFL+ IP+ GK+ L +
Sbjct: 505 VSTAKWLRGGVKFLDEIPKGSTGKIDRKVLRQMF 538
>sp|Q8GVF9|4CLL8_ORYSJ Putative 4-coumarate--CoA ligase-like 8 OS=Oryza sativa subsp.
japonica GN=4CLL8 PE=3 SV=1
Length = 609
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 30 AGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGV-ELTEQEISSYVEP 88
A +V+P ELE+++ + D AV PD +GE+P A+VVKK G L E E+ S+V+
Sbjct: 506 AYQVAPAELEDVLATHPDIHDAAVAPYPDKEAGEIPMAYVVKKQGSGHLQEDEVISFVQN 565
Query: 89 K 89
K
Sbjct: 566 K 566
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 34/47 (72%), Gaps = 6/47 (12%)
Query: 1 MEEEKALS-----VAPYKKLAGGVKFLETIPRNPAGKVSPTELENII 42
++E++ +S VAPYKK+ V F+++IPR+P+GK+ +L+N++
Sbjct: 554 LQEDEVISFVQNKVAPYKKIRK-VVFVDSIPRSPSGKILRRQLKNLL 599
>sp|P14913|4CL2_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1
Length = 544
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+ I + +V+P ELE +++ ++D AVV + D +GEVP AFVV+ G T
Sbjct: 434 VDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTT 493
Query: 79 EQEISSYV 86
E+EI +V
Sbjct: 494 EEEIKQFV 501
>sp|P63521|LCFA_SALTY Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=fadD PE=3 SV=1
Length = 561
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKK-PG------VELTEQEISS 84
V P E+E+++MQ +GV +VA VGVP SGE K FVVKK P + + ++
Sbjct: 464 NVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDPALTDDALITFCRRHLTG 523
Query: 85 YVEPKK 90
Y PK+
Sbjct: 524 YKVPKQ 529
>sp|P63522|LCFA_SALTI Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3
SV=1
Length = 561
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKK-PG------VELTEQEISS 84
V P E+E+++MQ +GV +VA VGVP SGE K FVVKK P + + ++
Sbjct: 464 NVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVVKKDPALTDDALITFCRRHLTG 523
Query: 85 YVEPKK 90
Y PK+
Sbjct: 524 YKVPKQ 529
>sp|P14912|4CL1_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1
Length = 544
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 19 VKFLETIPRNPAGKVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELT 78
V L+ I + +V+P ELE +++ ++D AVV + D +GEVP AFVV+ G T
Sbjct: 434 VDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTT 493
Query: 79 EQEISSYV 86
E+EI +V
Sbjct: 494 EEEIKQFV 501
>sp|P31687|4CL2_SOYBN 4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2
Length = 562
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V P ELE +++ +AD AVV D +GEVP AFVV+ G +LTE+ + ++
Sbjct: 464 QVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFI 518
>sp|B4EY25|CAIC_PROMH Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis
(strain HI4320) GN=caiC PE=3 SV=1
Length = 518
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS E+ENII + DVAV+GVPD + E KAFVV G L+E+ ++ E
Sbjct: 432 VSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLSEEAFFAFCE 486
>sp|A8ALR6|CAIC_CITK8 Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC
PE=3 SV=1
Length = 517
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ V+G+ D++ E KAFVV G LTE+E ++ E
Sbjct: 431 VSCIELENIISAHPKIQDIVVIGIHDSIRDEAIKAFVVLNEGETLTEEEFFAFCE 485
>sp|Q8GB18|CAIC_PROSL Probable crotonobetaine/carnitine-CoA ligase OS=Proteus sp. (strain
LE138) GN=caiC PE=3 SV=1
Length = 518
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS E+ENII + DVAV+GVPD + E KAFVV G L+E+ ++ E
Sbjct: 432 VSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVDGETLSEEAFFAFCE 486
>sp|Q54P78|4CL2_DICDI Probable 4-coumarate--CoA ligase 2 OS=Dictyostelium discoideum
GN=4cl2 PE=3 SV=1
Length = 551
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
+V P ELE +++ VAD VVG+ GEVP+ FVV K LTE+E+ + PK
Sbjct: 456 QVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPK 513
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 9 VAPYKKLAGGVKFLETIPRNPAGKVSPTELENI 41
+A YK GG+ F+ IP++ GK+ L++I
Sbjct: 514 IANYKHFRGGIFFIPAIPKSATGKLLRKNLKDI 546
>sp|Q54P79|4CL3_DICDI Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum
GN=4cl3 PE=3 SV=2
Length = 551
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
+V P ELE +++ VAD VVG+ GEVP+ FVV K LTE+E+ + PK
Sbjct: 456 QVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPK 513
>sp|Q54P77|4CL1_DICDI Probable 4-coumarate--CoA ligase 1 OS=Dictyostelium discoideum
GN=4cl1 PE=3 SV=1
Length = 551
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVEPK 89
+V P ELE +++ VAD VVG+ GEVP+ FVV K LTE+E+ + PK
Sbjct: 456 QVPPAELEALLLSHPKVADACVVGLSKGDMGEVPRGFVVIKQNESLTEKELLDWAHPK 513
>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1
Length = 547
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P E+E +++ ++D AVV + D +GEVP AFVV+ G +TE E+ ++
Sbjct: 451 QVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFI 505
>sp|P69451|LCFA_ECOLI Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12)
GN=fadD PE=1 SV=1
Length = 561
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
V P E+E+++MQ GV +VA VGVP SGE K FVVKK LTE+ + ++
Sbjct: 464 NVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDP-SLTEESLVTFCR 518
>sp|P69452|LCFA_ECOL6 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=fadD PE=3 SV=1
Length = 561
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
V P E+E+++MQ GV +VA VGVP SGE K FVVKK LTE+ + ++
Sbjct: 464 NVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDP-SLTEESLVTFCR 518
>sp|Q8XDR6|LCFA_ECO57 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7
GN=fadD PE=3 SV=1
Length = 561
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
V P E+E+++MQ GV +VA VGVP SGE K FVVKK LTE+ + ++
Sbjct: 464 NVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDP-SLTEESLVTFCR 518
>sp|B7M0D4|CAIC_ECO8A Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8
(strain IAI1) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVVNEGETLSEEEFFRFCE 485
>sp|P31685|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1
Length = 545
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ ++D AVV + D +GEVP AFVV+ G +TE E+ ++
Sbjct: 449 QVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFI 503
>sp|Q10S72|4CLL4_ORYSJ 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica
GN=4CLL4 PE=2 SV=1
Length = 552
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V P ELE +++ V DVAV+ PD G+ P A++V+K G L+E+E+ +V
Sbjct: 458 QVPPAELEALLLTHPEVTDVAVIPFPDREVGQFPMAYIVRKKGSNLSEREVMEFV 512
>sp|P31684|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1
Length = 545
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 32 KVSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYV 86
+V+P ELE +++ ++D AVV + D +GEVP AFVV+ G +TE E+ ++
Sbjct: 449 QVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFI 503
>sp|Q3Z5X2|CAIC_SHISS Probable crotonobetaine/carnitine-CoA ligase OS=Shigella sonnei
(strain Ss046) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|Q83MG9|CAIC_SHIFL Probable crotonobetaine/carnitine-CoA ligase OS=Shigella flexneri
GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|Q32K60|CAIC_SHIDS Probable crotonobetaine/carnitine-CoA ligase OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|B1LFX0|CAIC_ECOSM Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|B6HYY8|CAIC_ECOSE Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain SE11) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|A7ZVY7|CAIC_ECOHS Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O9:H4 (strain HS) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|B5YYD1|CAIC_ECO5E Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=caiC PE=3 SV=1
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|Q8XA34|CAIC_ECO57 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O157:H7 GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|B7L4G0|CAIC_ECO55 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain 55989 / EAEC) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|A7ZHC8|CAIC_ECO24 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
>sp|Q1RGG1|CAIC_ECOUT Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain UTI89 / UPEC) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFCFCE 485
>sp|B7N7R2|CAIC_ECOLU Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2
Length = 517
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 33 VSPTELENIIMQIAGVADVAVVGVPDTLSGEVPKAFVVKKPGVELTEQEISSYVE 87
VS ELENII + D+ VVG+ D++ E KAFVV G L+E+E + E
Sbjct: 431 VSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCE 485
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.132 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,866,139
Number of Sequences: 539616
Number of extensions: 1313040
Number of successful extensions: 4008
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 3553
Number of HSP's gapped (non-prelim): 538
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)