Query psy12108
Match_columns 665
No_of_seqs 543 out of 2642
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 18:56:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rau_A Tyrosine-protein phosph 100.0 7E-69 2.4E-73 579.0 33.1 320 111-477 5-329 (363)
2 1zb1_A BRO1 protein; AIP1, BRO 100.0 1.2E-62 4.1E-67 536.7 26.6 357 114-519 7-386 (392)
3 3c3r_A Programmed cell death 6 100.0 4.6E-60 1.6E-64 513.7 36.7 295 116-458 24-335 (380)
4 2xs1_A Programmed cell death 6 100.0 2.9E-56 9.9E-61 518.9 34.8 347 117-518 10-378 (704)
5 3r9m_A BRO1 domain-containing 100.0 4.8E-49 1.6E-53 426.7 32.7 262 120-433 10-291 (376)
6 1r6j_A Syntenin 1; PDZ, membra 99.6 6E-16 2.1E-20 131.0 10.7 80 516-600 2-81 (82)
7 1vae_A Rhophilin 2, rhophilin, 99.5 5.9E-15 2E-19 132.3 7.8 98 508-608 5-103 (111)
8 2vsv_A Rhophilin-2; scaffold p 99.5 7.2E-14 2.5E-18 124.8 11.1 84 518-604 23-107 (109)
9 3l4f_D SH3 and multiple ankyri 99.5 8.5E-14 2.9E-18 128.6 11.3 96 499-601 13-124 (132)
10 2he4_A Na(+)/H(+) exchange reg 99.5 1.3E-13 4.3E-18 118.4 11.6 83 517-602 3-88 (90)
11 1g9o_A NHE-RF; PDZ domain, com 99.5 3E-13 1E-17 116.1 12.4 82 518-602 3-87 (91)
12 2f5y_A Regulator of G-protein 99.5 1.6E-13 5.4E-18 118.2 10.6 81 518-601 3-83 (91)
13 2ego_A General receptor for ph 99.5 1.7E-13 6E-18 119.1 10.8 82 516-599 2-94 (96)
14 2vsp_A PDZ domain-containing p 99.5 4.5E-14 1.5E-18 121.6 6.8 86 516-604 1-89 (91)
15 1z87_A Alpha-1-syntrophin; pro 99.5 1.7E-13 5.7E-18 140.7 11.8 89 518-608 77-170 (263)
16 2v90_A PDZ domain-containing p 99.5 2.3E-13 7.7E-18 118.2 10.6 85 518-605 3-93 (96)
17 2iwo_A Multiple PDZ domain pro 99.5 1.7E-13 5.7E-18 124.5 10.1 86 515-602 21-114 (120)
18 2ehr_A INAD-like protein; PDZ 99.5 3.2E-13 1.1E-17 121.7 11.8 89 513-603 10-112 (117)
19 3r68_A Na(+)/H(+) exchange reg 99.5 1.7E-13 6E-18 118.6 9.5 85 517-604 4-91 (95)
20 1kwa_A Hcask/LIN-2 protein; PD 99.5 3.3E-13 1.1E-17 115.6 11.0 82 519-602 2-86 (88)
21 2dc2_A GOPC, golgi associated 99.5 2E-13 6.8E-18 120.5 9.6 90 514-605 5-99 (103)
22 3qe1_A Sorting nexin-27, G pro 99.4 4.7E-13 1.6E-17 118.6 11.8 85 515-602 3-103 (107)
23 2byg_A Channel associated prot 99.4 2.3E-13 7.8E-18 123.0 9.8 94 502-601 11-114 (117)
24 3b76_A E3 ubiquitin-protein li 99.4 1.8E-13 6.1E-18 124.0 9.0 84 516-601 22-113 (118)
25 2eei_A PDZ domain-containing p 99.4 3.2E-13 1.1E-17 119.5 9.8 92 515-609 5-99 (106)
26 2kv8_A RGS12, regulator of G-p 99.4 1.3E-13 4.5E-18 116.4 6.4 80 518-600 2-81 (83)
27 2fne_A Multiple PDZ domain pro 99.4 3.1E-13 1.1E-17 122.2 9.3 84 516-602 23-114 (117)
28 1cxz_B Protein (PKN); protein- 99.4 1E-13 3.5E-18 115.9 5.3 57 11-67 19-86 (86)
29 1v62_A KIAA1719 protein; struc 99.4 7.7E-13 2.6E-17 119.5 11.4 89 513-603 10-104 (117)
30 4e34_A Golgi-associated PDZ an 99.4 5.4E-13 1.9E-17 113.6 9.7 79 518-598 2-85 (87)
31 3gge_A PDZ domain-containing p 99.4 9.5E-13 3.2E-17 113.9 10.9 83 517-602 4-91 (95)
32 1qav_A Alpha-1 syntrophin (res 99.4 6.2E-13 2.1E-17 114.0 9.6 82 517-600 3-89 (90)
33 2dkr_A LIN-7 homolog B; LIN-7B 99.4 1.1E-12 3.8E-17 113.0 11.1 82 516-600 3-89 (93)
34 3o46_A Maguk P55 subfamily mem 99.4 1.1E-12 3.6E-17 113.3 11.0 81 518-601 4-88 (93)
35 2dls_A PDZ-rhogef, RHO guanine 99.4 1.5E-12 5.2E-17 112.5 11.8 82 516-601 6-87 (93)
36 2jik_A Synaptojanin-2 binding 99.4 1.1E-12 3.6E-17 115.1 10.8 83 517-602 6-98 (101)
37 2dlu_A INAD-like protein; PDZ 99.4 1.6E-12 5.6E-17 115.9 12.1 87 514-603 11-100 (111)
38 1wi2_A Riken cDNA 2700099C19; 99.4 2.5E-12 8.7E-17 113.4 13.1 83 515-600 12-98 (104)
39 1q3o_A Shank1; PDZ, GKAP, pept 99.4 1.2E-12 4E-17 116.6 10.5 83 517-601 6-104 (109)
40 1uhp_A Hypothetical protein KI 99.4 1.9E-12 6.5E-17 114.8 11.8 82 517-601 7-101 (107)
41 2d90_A PDZ domain containing p 99.4 1.3E-12 4.6E-17 114.7 10.6 88 517-607 5-95 (102)
42 2q9v_A Membrane-associated gua 99.4 1.1E-12 3.9E-17 112.3 9.9 80 518-600 2-88 (90)
43 2awx_A Synapse associated prot 99.4 1.4E-12 4.9E-17 115.2 10.8 87 518-607 3-99 (105)
44 3cbz_A Dishevelled-2; PDZ doma 99.4 9.5E-13 3.3E-17 117.2 9.6 83 518-602 5-97 (108)
45 2d92_A INAD-like protein; PDZ 99.4 1.6E-12 5.4E-17 115.6 10.7 81 518-601 15-105 (108)
46 1uew_A Membrane associated gua 99.4 2.8E-12 9.5E-17 115.1 12.2 84 517-602 9-104 (114)
47 2ejy_A 55 kDa erythrocyte memb 99.4 1.6E-12 5.4E-17 113.6 10.2 82 517-600 11-95 (97)
48 2fe5_A Presynaptic protein SAP 99.4 2.1E-12 7.3E-17 111.4 11.0 81 518-601 3-93 (94)
49 2r4h_A Membrane-associated gua 99.4 1.8E-12 6.1E-17 116.1 10.7 91 505-601 14-109 (112)
50 1d5g_A Human phosphatase HPTP1 99.4 3.3E-12 1.1E-16 110.7 12.1 82 517-601 4-93 (96)
51 1nf3_C PAR-6B; semi-CRIB motif 99.4 1.5E-12 5E-17 119.5 10.3 88 514-602 25-126 (128)
52 2eno_A Synaptojanin-2-binding 99.4 2.8E-12 9.7E-17 116.1 11.9 86 514-602 13-108 (120)
53 2djt_A Unnamed protein product 99.4 3E-12 1E-16 112.8 11.8 83 517-602 10-99 (104)
54 3hpk_A Protein interacting wit 99.4 2.1E-12 7.3E-17 117.8 11.1 82 518-601 19-105 (125)
55 3ngh_A PDZ domain-containing p 99.4 2E-12 7E-17 114.3 10.3 84 518-603 1-87 (106)
56 1tp5_A Presynaptic density pro 99.4 2.7E-12 9.1E-17 116.0 11.2 93 506-601 2-98 (119)
57 2db5_A INAD-like protein; PDZ 99.4 1.1E-12 3.9E-17 120.1 8.9 84 516-601 23-115 (128)
58 2qg1_A Multiple PDZ domain pro 99.4 3.7E-12 1.3E-16 109.5 11.5 82 518-601 4-89 (92)
59 2cs5_A Tyrosine-protein phosph 99.4 2.7E-12 9.2E-17 116.0 10.8 83 517-601 14-106 (119)
60 3i4w_A Disks large homolog 4; 99.4 3.3E-12 1.1E-16 112.3 11.1 82 516-600 9-94 (104)
61 1ihj_A INAD; intermolecular di 99.4 2.1E-12 7.3E-17 112.4 9.6 82 518-601 5-97 (98)
62 2opg_A Multiple PDZ domain pro 99.3 4.2E-12 1.4E-16 110.5 11.1 83 517-602 3-91 (98)
63 1uep_A Membrane associated gua 99.3 2.5E-12 8.6E-17 113.2 9.8 81 518-601 9-96 (103)
64 2jxo_A Ezrin-radixin-moesin-bi 99.3 3.3E-12 1.1E-16 111.2 10.4 80 518-600 9-92 (98)
65 1n7e_A AMPA receptor interacti 99.3 6.3E-12 2.2E-16 109.3 12.1 81 519-602 6-91 (97)
66 2i1n_A Discs, large homolog 3; 99.3 4.2E-12 1.5E-16 111.4 11.1 81 519-602 5-95 (102)
67 1x6d_A Interleukin-16; PDZ dom 99.3 4.7E-12 1.6E-16 114.4 11.7 86 517-604 14-106 (119)
68 2e7k_A Maguk P55 subfamily mem 99.3 3.9E-12 1.3E-16 109.6 10.6 82 517-601 5-88 (91)
69 1v5q_A GRIP1 homolog, glutamat 99.3 5.6E-12 1.9E-16 114.6 12.1 85 517-603 14-109 (122)
70 1ujd_A KIAA0559 protein; PDZ d 99.3 3E-12 1E-16 115.5 10.1 84 518-601 12-109 (117)
71 1wi4_A Synip, syntaxin binding 99.3 4.9E-12 1.7E-16 112.8 11.3 82 517-602 14-106 (109)
72 1uju_A Scribble; PDZ domain, c 99.3 1.4E-12 4.7E-17 116.5 7.6 83 517-601 8-104 (111)
73 1v6b_A Harmonin isoform A1; st 99.3 2.6E-12 8.7E-17 116.2 9.4 94 504-601 3-107 (118)
74 1ueq_A Membrane associated gua 99.3 1.1E-11 3.8E-16 112.8 13.7 83 518-603 19-108 (123)
75 1i16_A Interleukin 16, LCF; cy 99.3 1.8E-12 6.1E-17 119.3 8.3 82 517-601 28-118 (130)
76 2uzc_A Human pdlim5, PDZ and L 99.3 5.2E-12 1.8E-16 107.7 10.5 79 519-601 4-86 (88)
77 2o2t_A Multiple PDZ domain pro 99.3 1.6E-12 5.6E-17 117.0 7.8 85 516-602 18-111 (117)
78 2vwr_A Ligand of NUMB protein 99.3 6.7E-12 2.3E-16 108.6 11.3 83 519-602 4-90 (95)
79 2i04_A Membrane-associated gua 99.3 6.6E-12 2.2E-16 106.3 10.9 76 521-599 3-85 (85)
80 2iwq_A Multiple PDZ domain pro 99.3 8.1E-12 2.8E-16 113.9 12.2 87 514-602 20-120 (123)
81 2dm8_A INAD-like protein; PDZ 99.3 3.5E-12 1.2E-16 114.6 9.6 94 503-602 5-104 (116)
82 2yuy_A RHO GTPase activating p 99.3 6.4E-13 2.2E-17 121.5 4.8 85 515-602 5-121 (126)
83 2kom_A Partitioning defective 99.3 7.2E-12 2.5E-16 113.8 11.7 96 502-601 15-120 (121)
84 2fcf_A Multiple PDZ domain pro 99.3 1.1E-11 3.8E-16 108.8 12.6 83 518-602 4-100 (103)
85 2jil_A GRIP1 protein, glutamat 99.3 4.5E-12 1.5E-16 110.1 9.8 81 519-602 4-93 (97)
86 2pa1_A PDZ and LIM domain prot 99.3 5.5E-12 1.9E-16 107.4 10.0 72 530-601 10-85 (87)
87 2z17_A Pleckstrin homology SEC 99.3 3.5E-12 1.2E-16 112.5 9.0 79 517-597 14-103 (104)
88 1wf8_A Neurabin-I; PDZ domain, 99.3 4.4E-12 1.5E-16 112.4 9.6 81 518-601 9-100 (107)
89 1va8_A Maguk P55 subfamily mem 99.3 8.6E-12 2.9E-16 111.8 11.5 83 518-602 25-109 (113)
90 1ufx_A KIAA1526 protein; PDZ d 99.3 5.1E-12 1.7E-16 111.5 9.8 82 518-602 6-98 (103)
91 2lob_A Golgi-associated PDZ an 99.0 1.6E-13 5.4E-18 123.2 0.0 97 500-598 9-110 (112)
92 3nfk_A Tyrosine-protein phosph 99.3 7.3E-12 2.5E-16 110.8 10.8 81 517-599 16-106 (107)
93 1rgw_A ZAsp protein; PDZ, cyph 99.3 6.2E-12 2.1E-16 106.4 9.8 77 520-600 3-83 (85)
94 2yt7_A Amyloid beta A4 precurs 99.3 9.9E-12 3.4E-16 109.1 11.3 82 517-600 8-98 (101)
95 1m5z_A GRIP, AMPA receptor int 99.3 1.1E-11 3.8E-16 106.3 11.4 81 518-599 6-89 (91)
96 2q3g_A PDZ and LIM domain prot 99.3 5.7E-12 2E-16 107.7 9.2 71 531-601 12-86 (89)
97 1wg6_A Hypothetical protein (r 99.3 3.5E-12 1.2E-16 116.9 8.1 80 521-602 28-123 (127)
98 3khf_A Microtubule-associated 99.3 8.4E-12 2.9E-16 108.9 10.1 79 521-602 5-94 (99)
99 1wha_A KIAA0147 protein, scrib 99.3 6.9E-12 2.4E-16 110.8 9.5 81 518-601 7-98 (105)
100 2koj_A Partitioning defective 99.3 1.8E-11 6.2E-16 109.0 12.3 81 519-602 12-102 (111)
101 3e17_A Tight junction protein 99.3 9.8E-12 3.4E-16 106.4 10.2 78 522-602 4-82 (88)
102 2edv_A FERM and PDZ domain-con 99.3 2.2E-12 7.6E-17 112.2 6.2 83 517-601 7-89 (96)
103 4amh_A Disks large homolog 1; 99.3 1E-11 3.5E-16 110.1 10.4 73 530-602 11-93 (106)
104 2csj_A TJP2 protein; PDZ domai 99.3 5.2E-12 1.8E-16 113.9 8.6 84 518-604 14-107 (117)
105 3soe_A Membrane-associated gua 99.3 9.3E-12 3.2E-16 111.5 10.1 84 517-605 11-97 (113)
106 2eeh_A PDZ domain-containing p 99.3 2.1E-11 7.1E-16 106.7 12.0 83 517-602 9-95 (100)
107 2gzv_A PRKCA-binding protein; 99.3 2.1E-11 7.2E-16 109.6 12.3 83 517-601 23-110 (114)
108 1q7x_A PDZ2B domain of PTP-BAS 99.3 1.2E-11 4.1E-16 109.7 10.5 84 516-602 7-103 (108)
109 1um1_A KIAA1849 protein, RSGI 99.3 1.5E-11 5.2E-16 109.4 11.1 83 517-602 7-97 (110)
110 2daz_A INAD-like protein; PDZ 99.3 7.7E-12 2.7E-16 113.9 9.3 82 518-602 25-112 (124)
111 2pkt_A PDZ and LIM domain prot 99.3 1.2E-11 4.1E-16 106.2 9.9 80 519-602 4-87 (91)
112 2g5m_B Neurabin-2; spinophilin 99.3 1.2E-11 4.2E-16 110.5 10.3 82 519-603 5-97 (113)
113 1whd_A RGS3, regulator of G-pr 99.3 4.8E-12 1.6E-16 110.9 7.3 82 517-601 14-95 (100)
114 2eeg_A PDZ and LIM domain prot 99.3 1.1E-11 3.7E-16 107.3 9.3 80 518-601 8-91 (94)
115 2kpk_A Membrane-associated gua 99.3 2.5E-11 8.6E-16 111.4 12.1 81 518-601 18-105 (129)
116 2edz_A PDZ domain-containing p 99.3 1.7E-11 5.7E-16 110.0 10.2 83 518-602 13-98 (114)
117 2jre_A C60-1 PDZ domain peptid 99.3 2.8E-11 9.4E-16 107.3 11.5 81 519-601 13-104 (108)
118 2la8_A Inactivation-NO-after-p 99.3 2.4E-11 8.2E-16 107.8 11.0 79 521-601 5-85 (106)
119 2h2b_A Tight junction protein 99.3 2.2E-11 7.5E-16 107.8 10.7 82 518-602 7-98 (107)
120 1y7n_A Amyloid beta A4 precurs 99.3 2.8E-11 9.6E-16 104.1 11.0 77 519-599 12-88 (90)
121 2qkv_A Inactivation-NO-after-p 99.3 2.5E-11 8.4E-16 105.5 10.6 81 519-601 9-91 (96)
122 2w4f_A Protein LAP4; structura 99.2 3.7E-11 1.3E-15 104.2 11.4 80 520-602 5-94 (97)
123 3egg_C Spinophilin; PP1, serin 99.2 1.6E-11 5.4E-16 118.2 9.9 78 519-599 81-169 (170)
124 1x5q_A LAP4 protein; PDZ domai 99.2 4.4E-11 1.5E-15 106.4 12.1 82 518-602 15-106 (110)
125 3axa_A Afadin, nectin-3, prote 99.2 2.6E-11 8.8E-16 107.2 10.5 79 520-602 13-99 (106)
126 3bpu_A Membrane-associated gua 99.2 1.8E-11 6.3E-16 104.3 9.0 79 518-601 3-86 (88)
127 1wfg_A Regulating synaptic mem 99.2 1.3E-11 4.4E-16 113.7 8.7 80 520-601 38-127 (131)
128 1wf7_A Enigma homologue protei 99.2 1.9E-11 6.4E-16 107.5 9.2 81 518-602 5-89 (103)
129 1uit_A Human discs large 5 pro 99.2 5.1E-11 1.7E-15 107.2 11.7 83 517-602 18-102 (117)
130 1wfv_A Membrane associated gua 99.2 1.2E-11 4.2E-16 108.5 7.2 81 519-602 12-97 (103)
131 2dmz_A INAD-like protein; PDZ 99.2 3.7E-11 1.3E-15 110.1 10.5 83 518-602 15-107 (129)
132 1mfg_A ERB-B2 interacting prot 99.2 4.1E-11 1.4E-15 103.6 10.2 76 520-600 5-92 (95)
133 3kzd_A TIAM-1, T-lymphoma inva 99.2 2.1E-11 7.3E-16 105.6 8.2 80 518-599 6-90 (94)
134 2iwn_A Multiple PDZ domain pro 99.2 4.7E-11 1.6E-15 103.3 10.3 79 520-601 6-93 (97)
135 3k1r_A Harmonin; protein-prote 99.2 3E-11 1E-15 118.5 9.9 83 517-602 83-169 (192)
136 2kjd_A Sodium/hydrogen exchang 99.2 6.2E-11 2.1E-15 108.3 11.0 83 516-601 7-93 (128)
137 1um7_A Synapse-associated prot 99.2 2.1E-11 7.1E-16 108.9 7.1 83 516-601 13-99 (113)
138 1uez_A KIAA1526 protein; PDZ d 99.2 5.7E-11 2E-15 104.0 9.7 84 516-601 6-93 (101)
139 1n7t_A 99-MER peptide of densi 99.2 5.9E-11 2E-15 104.3 9.5 78 518-600 11-100 (103)
140 1vb7_A PDZ and LIM domain 2; P 99.2 2.9E-11 9.9E-16 104.5 7.1 79 522-602 8-90 (94)
141 3qik_A Phosphatidylinositol 3, 99.2 8.4E-11 2.9E-15 102.7 9.9 78 520-600 19-100 (101)
142 1ujv_A Membrane associated gua 99.2 1.6E-10 5.4E-15 100.5 11.6 81 517-602 9-92 (96)
143 2edp_A Fragment, shroom family 99.2 5E-11 1.7E-15 104.4 8.3 82 518-602 9-95 (100)
144 1x5n_A Harmonin; PDZ domain, u 99.2 1.3E-10 4.3E-15 104.1 11.0 84 514-600 11-98 (114)
145 1qau_A Neuronal nitric oxide s 99.2 1.8E-10 6.2E-15 102.6 11.3 82 520-603 3-89 (112)
146 2krg_A Na(+)/H(+) exchange reg 99.2 7.2E-11 2.5E-15 117.9 9.5 80 517-599 8-91 (216)
147 1wif_A RSGI RUH-020, riken cDN 99.1 7.9E-11 2.7E-15 107.7 8.5 80 518-600 27-110 (126)
148 2qt5_A Glutamate receptor-inte 99.1 1.6E-10 5.5E-15 113.6 11.0 85 515-601 4-93 (200)
149 1uf1_A KIAA1526 protein; PDZ d 99.1 8.6E-10 3E-14 100.8 14.0 84 518-604 20-107 (128)
150 3gsl_A Disks large homolog 4; 99.1 2.1E-10 7.3E-15 111.6 10.5 81 518-601 5-95 (196)
151 3tsv_A Tight junction protein 99.1 3.3E-10 1.1E-14 103.3 10.8 71 531-601 38-112 (124)
152 1v5l_A PDZ and LIM domain 3; a 99.1 8.5E-11 2.9E-15 103.4 6.5 80 519-602 6-89 (103)
153 3sfj_A TAX1-binding protein 3; 99.1 2.7E-10 9.2E-15 100.1 9.5 68 532-599 19-103 (104)
154 2eaq_A LIM domain only protein 99.1 3.5E-10 1.2E-14 96.7 9.8 79 522-600 7-88 (90)
155 2vz5_A TAX1-binding protein 3; 99.1 2.4E-10 8.2E-15 106.3 9.3 87 518-604 23-127 (139)
156 2d8i_A T-cell lymphoma invasio 99.1 1.5E-10 5E-15 104.1 7.5 81 518-601 15-101 (114)
157 1b8q_A Protein (neuronal nitri 99.1 2.8E-10 9.6E-15 103.9 9.1 84 518-603 8-96 (127)
158 3cyy_A Tight junction protein 99.1 7.9E-10 2.7E-14 94.7 10.9 81 519-602 3-84 (92)
159 1p1d_A PDZ45, glutamate recept 99.0 4.9E-10 1.7E-14 109.9 9.6 83 518-602 6-99 (196)
160 3r0h_A INAD, inactivation-NO-a 99.0 1.1E-09 3.9E-14 107.7 12.3 83 518-603 18-110 (206)
161 2xkx_A Disks large homolog 4; 99.0 9.8E-10 3.4E-14 128.4 13.7 93 506-601 46-149 (721)
162 2rcz_A Tight junction protein 99.0 1.4E-09 4.8E-14 90.6 10.2 69 530-600 11-80 (81)
163 3r0h_A INAD, inactivation-NO-a 99.0 1.1E-09 3.8E-14 107.8 10.8 83 520-604 115-199 (206)
164 2qbw_A PDZ-fibronectin fusion 99.0 8.9E-10 3E-14 107.7 9.8 67 532-599 2-80 (195)
165 1w9e_A Syntenin 1; cell adhesi 99.0 1.4E-09 4.9E-14 103.7 10.4 81 518-600 4-86 (166)
166 3shw_A Tight junction protein 99.0 8.2E-10 2.8E-14 121.9 9.7 78 519-600 2-83 (468)
167 3gsl_A Disks large homolog 4; 99.0 1.4E-09 4.7E-14 105.8 9.7 82 518-602 100-191 (196)
168 3tsz_A Tight junction protein 98.9 2.3E-09 7.9E-14 116.3 9.8 79 518-600 9-91 (391)
169 1wh1_A KIAA1095 protein; PDZ d 98.9 7.3E-09 2.5E-13 94.2 11.4 81 519-602 20-108 (124)
170 2yub_A LIMK-2, LIM domain kina 98.9 3.2E-09 1.1E-13 95.9 8.4 71 533-603 30-107 (118)
171 1p1d_A PDZ45, glutamate recept 98.7 3.6E-08 1.2E-12 96.5 10.6 80 520-601 109-195 (196)
172 1fc6_A Photosystem II D1 prote 98.7 1.7E-08 5.8E-13 109.5 8.9 102 497-602 53-160 (388)
173 2qt5_A Glutamate receptor-inte 98.7 4.1E-08 1.4E-12 96.3 9.9 79 520-601 108-195 (200)
174 3suz_A Amyloid beta A4 precurs 98.7 9.9E-09 3.4E-13 111.4 5.8 92 506-602 195-295 (388)
175 2xkx_A Disks large homolog 4; 98.7 4.6E-08 1.6E-12 114.3 10.7 81 518-601 307-391 (721)
176 3suz_A Amyloid beta A4 precurs 98.4 4.1E-08 1.4E-12 106.5 2.0 81 518-602 295-375 (388)
177 1w9e_A Syntenin 1; cell adhesi 98.4 9.1E-07 3.1E-11 84.1 10.6 77 518-599 88-164 (166)
178 2kjp_A Uncharacterized protein 98.4 1.6E-07 5.5E-12 80.7 4.2 58 543-603 2-61 (91)
179 3id1_A Regulator of sigma E pr 98.4 6.8E-07 2.3E-11 77.3 7.3 57 544-602 4-62 (95)
180 2pzd_A Serine protease HTRA2; 98.3 9.6E-07 3.3E-11 78.5 8.2 58 542-602 35-92 (113)
181 3i18_A LMO2051 protein; alpha- 98.3 6E-07 2E-11 78.3 6.5 59 542-603 7-67 (100)
182 2p3w_A Probable serine proteas 98.3 1.6E-06 5.4E-11 77.0 8.6 58 542-602 35-92 (112)
183 2i6v_A General secretion pathw 98.3 8.1E-07 2.8E-11 75.3 6.0 57 543-601 20-78 (87)
184 2l97_A HTRA, putative serine p 98.3 1.1E-06 3.8E-11 80.8 7.5 58 542-602 57-116 (134)
185 2zpm_A Regulator of sigma E pr 98.3 7.9E-07 2.7E-11 75.7 5.8 58 543-602 5-63 (91)
186 2kl1_A YLBL protein; structure 98.3 7E-07 2.4E-11 77.0 5.2 59 542-603 5-65 (94)
187 3k50_A Putative S41 protease; 98.2 1.1E-06 3.7E-11 95.5 5.6 69 531-602 73-147 (403)
188 3rle_A Golgi reassembly-stacki 98.1 4.1E-06 1.4E-10 82.9 7.9 58 543-601 17-76 (209)
189 2i4s_A General secretion pathw 98.1 3.6E-06 1.2E-10 73.9 6.5 57 543-601 38-96 (105)
190 1y8t_A Hypothetical protein RV 98.0 1.1E-05 3.9E-10 84.9 9.3 69 531-601 228-302 (324)
191 1te0_A Protease DEGS; two doma 98.0 1E-05 3.6E-10 85.1 8.8 60 542-603 244-305 (318)
192 2hga_A Conserved protein MTH13 98.0 1.1E-05 3.7E-10 73.4 7.2 66 533-602 16-83 (125)
193 3stj_A Protease DEGQ; serine p 97.9 9.8E-06 3.3E-10 86.4 6.9 60 542-603 263-324 (345)
194 3rle_A Golgi reassembly-stacki 97.9 1.7E-05 5.9E-10 78.3 7.8 68 532-602 95-171 (209)
195 4fgm_A Aminopeptidase N family 97.9 9.7E-06 3.3E-10 92.5 6.5 69 532-603 485-556 (597)
196 1lcy_A HTRA2 serine protease; 97.8 2.3E-05 7.9E-10 82.7 7.2 59 542-603 256-314 (325)
197 3pv2_A DEGQ; trypsin fold, PDZ 97.8 4.5E-05 1.5E-09 84.2 9.1 60 542-603 282-343 (451)
198 4a8c_A Periplasmic PH-dependen 97.8 3E-05 1E-09 85.3 7.6 60 542-603 363-422 (436)
199 3qo6_A Protease DO-like 1, chl 97.7 3.2E-05 1.1E-09 82.4 6.8 60 542-603 251-323 (348)
200 4a8c_A Periplasmic PH-dependen 97.7 3.3E-05 1.1E-09 84.9 6.2 60 542-603 263-324 (436)
201 1k32_A Tricorn protease; prote 97.7 7.6E-05 2.6E-09 90.3 9.9 93 498-601 710-815 (1045)
202 3pv2_A DEGQ; trypsin fold, PDZ 97.7 3.5E-05 1.2E-09 85.0 6.1 58 543-602 387-444 (451)
203 3num_A Serine protease HTRA1; 97.5 1.4E-05 4.9E-10 84.5 0.0 59 542-603 254-312 (332)
204 1ky9_A Protease DO, DEGP, HTRA 97.3 8.8E-05 3E-09 81.8 2.9 59 542-602 286-346 (448)
205 1ky9_A Protease DO, DEGP, HTRA 97.3 3.9E-05 1.3E-09 84.5 0.0 67 534-602 372-441 (448)
206 4fln_A Protease DO-like 2, chl 96.7 0.0014 4.6E-08 73.6 5.7 61 543-604 278-348 (539)
207 4fln_A Protease DO-like 2, chl 95.4 0.019 6.5E-07 64.3 7.0 55 541-597 414-469 (539)
208 2ke4_A CDC42-interacting prote 84.1 1.4 4.8E-05 37.8 5.3 55 12-66 17-84 (98)
209 3vtx_A MAMA; tetratricopeptide 61.8 85 0.0029 27.7 13.5 30 219-257 3-32 (184)
210 4gcn_A Protein STI-1; structur 38.9 1.6E+02 0.0056 24.6 9.3 35 215-258 2-36 (127)
211 4gyw_A UDP-N-acetylglucosamine 37.0 1.7E+02 0.0059 33.4 11.7 30 220-258 8-37 (723)
212 3dor_A Protein CT_858, CPAF; m 36.6 35 0.0012 38.2 5.4 31 541-575 95-125 (583)
213 2ifu_A Gamma-SNAP; membrane fu 25.1 2.3E+02 0.0077 27.8 8.9 184 217-471 72-263 (307)
214 3q15_A PSP28, response regulat 24.8 5.2E+02 0.018 25.6 13.2 35 218-261 138-172 (378)
215 4g1t_A Interferon-induced prot 23.1 4.9E+02 0.017 26.4 11.5 35 220-263 50-84 (472)
216 1zu2_A Mitochondrial import re 21.9 1E+02 0.0034 28.4 5.0 37 220-256 79-117 (158)
217 3iu6_A Protein polybromo-1; PB 21.4 2.6E+02 0.009 25.4 7.5 43 114-157 31-78 (147)
No 1
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=100.00 E-value=7e-69 Score=578.96 Aligned_cols=320 Identities=26% Similarity=0.426 Sum_probs=293.3
Q ss_pred CCCccccccCCCCCCCCCCChHHHHHHHhhhcCCChhhHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHHHHHHhcc
Q psy12108 111 KEPVMPMIPLGLKETKEIDVREPFKDFILEHYSEDGTAYEDSVSEFMDMRQAMRTPNRDNSGISLLFQYYNQLYFIERRF 190 (665)
Q Consensus 111 ~~~~~pmi~l~lK~T~~vD~~~~L~~~I~~~y~e~~~~~~~~i~~l~~LR~~~~~~~~~~~~~~~L~~Yy~qL~~l~~rf 190 (665)
-.|+||||+||||+|++|||..||++||.+||+|+++.|+++|++|++||++++++.+|++|+++|++||+||++|+.||
T Consensus 5 ~~~~~pmi~l~lK~t~~vd~~~~L~~~I~~~y~e~~~~~~~~l~~l~~LR~~~~~~~~~~~g~~~L~~Yy~qL~~l~~rf 84 (363)
T 3rau_A 5 AVPRMPMIWLDLKEAGDFHFQPAVKKFVLKNYGENPEAYNEELKKLELLRQNAVRVPRDFEGCSVLRKYLGQLHYLQSRV 84 (363)
T ss_dssp -CCCCCCCCCCCCCEEEECCHHHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCcCCccCCCCCcCCCCChHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCcceeEe-ecCCCCCcccccchhHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHHHHhhcc
Q psy12108 191 FP-PDRSLGIYFE-YDSLTGVPSCQRTIAFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTYLQENFT 268 (665)
Q Consensus 191 ~~-~~~~~~v~F~-~dslt~~~~~q~sl~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~l~e~~~ 268 (665)
|. +++..+|.|+ ||+|+|+++++.++.||+|||||||||+|||+|++++|.+++|+|.||++||+|||+|+||++++.
T Consensus 85 p~~~~~~~~i~F~W~ds~~~~~~~~~sl~fE~a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~~ 164 (363)
T 3rau_A 85 PMGSGQEAAVPVTWTEIFSGKSVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFP 164 (363)
T ss_dssp CCSTTCTTCCCEEEECTTTCCEEEESCHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcccccceeEEeecccCCccccccCHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 64 4456799999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCccc---cCccchh
Q psy12108 269 NAPSMDLGPPMLDMLIQLMLAQARECLFQKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPEV---KDYVPLS 345 (665)
Q Consensus 269 ~~ps~Dls~~~L~~L~~lmLAQAQEc~~~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~~---~~~~~~~ 345 (665)
+.|+.||++++|.+|..+||||||||+|+|++.++. +..+ |||+|+||+++|++|++.+++.+. .+.++++
T Consensus 165 ~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~---k~~l---iAkLa~q~~~~Y~~a~~~l~~~~~~~~~~~~~~~ 238 (363)
T 3rau_A 165 QAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNR---KSFL---VARISAQVVDYYKEACRALENPDTASLLGRIQKD 238 (363)
T ss_dssp SCSSGGGSHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CHHH---HHHHHHHHHHHHHHHHHHHTCHHHHHHHTTHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---chhH---HHHHHHHHHHHHHHHHHHHhcCccccccccccHH
Confidence 999999999999999999999999999999998653 4554 899999999999999999987653 4578999
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhcccccccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHHHHHHHHH
Q psy12108 346 WVSLIQVKKEHYLALSHYYCASGLLTKSLANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHLRSALLFH 425 (665)
Q Consensus 346 W~~~~~~K~~~f~A~A~y~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahLr~A~~~~ 425 (665)
|..++++|..||+|+||||+|+.+.+.. ++|+++|||+.|...+
T Consensus 239 w~~~v~~K~~~~~A~A~y~~a~~~~e~~------------------------------------k~GeaIa~L~~A~~~l 282 (363)
T 3rau_A 239 WKKLVQMKIYYFAAVAHLHMGKQAEEQQ------------------------------------KFGERVAYFQSALDKL 282 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT------------------------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhh------------------------------------hHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876643 7999999999999999
Q ss_pred HHHHHHHhHhhhhcchhHHHHHHHHHHHhHHHHhhhhcchhhhhhhccCCCC
Q psy12108 426 EESQRIYRMCRELRNKQALFQVLVQAHTLTLEMYADVEEEDEFNTMYEAPNI 477 (665)
Q Consensus 426 eeAlRl~~~c~~lr~~~~L~~vl~~a~~~s~~~y~~~~~edd~~~~~~ap~I 477 (665)
++|.+..+ .....+++.++...+....++.+.+++|||...-.+|+.
T Consensus 283 ~~a~~~~k-----~~~~~~~~~~~~~~~~i~~~l~~aekdNd~IY~~~VP~~ 329 (363)
T 3rau_A 283 NEAIKLAK-----GQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAVPAL 329 (363)
T ss_dssp HHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG
T ss_pred HHHHHHhc-----CCchhHHHHHHHHHHHHHHHHHHHHhccCcCCcccCCCc
Confidence 99999843 245677777877777888888889999999888777764
No 2
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-62 Score=536.74 Aligned_cols=357 Identities=21% Similarity=0.327 Sum_probs=283.5
Q ss_pred ccccccCCCCCCCCCCChHHHHHHHhhhcCCC--hhhHHHHHH-HHHHHHHHhcCCCCCchhhhHHHHHHHHHHHHHhcc
Q psy12108 114 VMPMIPLGLKETKEIDVREPFKDFILEHYSED--GTAYEDSVS-EFMDMRQAMRTPNRDNSGISLLFQYYNQLYFIERRF 190 (665)
Q Consensus 114 ~~pmi~l~lK~T~~vD~~~~L~~~I~~~y~e~--~~~~~~~i~-~l~~LR~~~~~~~~~~~~~~~L~~Yy~qL~~l~~rf 190 (665)
..|||++|||+|++|||..||++||.+||+++ ++.|+++|. +|++||++++++.++++++++|.+||+||++|+.||
T Consensus 7 ~~~~l~~plK~t~~vd~~~~L~~~I~~~y~~~~~~~~y~~~l~~~l~~lR~~~~~~~~~~~~~~~l~~Y~~~L~~l~~rf 86 (392)
T 1zb1_A 7 KPYLFDLKLKDTEKLDWKKGLSSYLKKSYGSSQWRTFYDEKATSELDHLRNNANGELAPSSLSEQNLKYYSFLEHLYFRL 86 (392)
T ss_dssp CCCCCCCCCCCBCCCCHHHHHHHHHHHHSCTTTGGGGCCHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCccCHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999999998 888899999 999999999999999999999999999999999999
Q ss_pred CCCCCCcceeEe-ecCC-----CCCcccccchhHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHHHH
Q psy12108 191 FPPDRSLGIYFE-YDSL-----TGVPSCQRTIAFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTYLQ 264 (665)
Q Consensus 191 ~~~~~~~~v~F~-~dsl-----t~~~~~q~sl~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~l~ 264 (665)
++++...+|.|+ +|+| ++.++++.++.||++||||||||+|||+|+.++|. |+|.||++||+|||+|+||+
T Consensus 87 ~~~~~~~~i~F~W~d~l~~~~~~~~~~~~~~l~fE~a~vLfNlaal~s~~A~~~~r~---~lk~A~~~fq~AAG~f~~l~ 163 (392)
T 1zb1_A 87 GSKGSRLKMDFTWYDAEYSSAQKGLKYTQHTLAFEKSCTLFNIAVIFTQIARENINE---DYKNSIANLTKAFSCFEYLS 163 (392)
T ss_dssp GGGGGGGCCCEEEECCCCSSSCSSCEEEECCHHHHHHHHHHHHHHHHHHHHHHTTTS---SSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccceeeeecccccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHhchH---HHHHHHHHHHHHHHHHHHHH
Confidence 877767899999 9999 67889999999999999999999999999999886 99999999999999999999
Q ss_pred hhccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCcc--ccCcc
Q psy12108 265 ENFTNAPSMDLGPPMLDMLIQLMLAQARECLFQKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPE--VKDYV 342 (665)
Q Consensus 265 e~~~~~ps~Dls~~~L~~L~~lmLAQAQEc~~~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~--~~~~~ 342 (665)
+++.+.|+.||++++|.+|..+||||||||+|+|++.+..++++..+ |||+|+|++++|++|++.++..+ ..+++
T Consensus 164 ~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~~~~k~~l---iAkLa~~~~~~Y~~a~~~l~~~~~~~~~~~ 240 (392)
T 1zb1_A 164 ENFLNSPSVDLQSENTRFLANICHAEAQELFVLKLLNDQISSKQYTL---ISKLSRATCNLFQKCHDFMKEIDDDVAIYG 240 (392)
T ss_dssp HHCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHTTSTTGGGCHHH---HHHHHHHHHHHHHHHHHHHHSCCCTTTSSS
T ss_pred HhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhH---HHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 99999999999999999999999999999999999975333445555 89999999999999999998866 45789
Q ss_pred chhHHHHHHHHHHHHHHHhhHHHhhhcccccccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHHHHHH
Q psy12108 343 PLSWVSLIQVKKEHYLALSHYYCASGLLTKSLANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHLRSAL 422 (665)
Q Consensus 343 ~~~W~~~~~~K~~~f~A~A~y~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahLr~A~ 422 (665)
+++|..++++|..||+|+||||+|..+.+.. ++|+++|+|+.|.
T Consensus 241 ~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~------------------------------------k~GeaIa~L~~A~ 284 (392)
T 1zb1_A 241 EPKWKTTVTCKLHFYKSLSAYYHGLHLEEEN------------------------------------RVGEAIAFLDFSM 284 (392)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------------------------------CTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------------------------chHHHHHHHHHHH
Confidence 9999999999999999999999999887643 7999999999999
Q ss_pred HHHHHHHHHHhHhhhhcchhHHHHHHHHHHHhHHHHhhhhcchhhhhhhccCCCCCCCCcc----ccCCCCC-CC----C
Q psy12108 423 LFHEESQRIYRMCRELRNKQALFQVLVQAHTLTLEMYADVEEEDEFNTMYEAPNITPSTKF----QLTLTPP-DF----A 493 (665)
Q Consensus 423 ~~~eeAlRl~~~c~~lr~~~~L~~vl~~a~~~s~~~y~~~~~edd~~~~~~ap~I~p~t~~----~~~~~~P-~f----~ 493 (665)
..++++.+....-....+...+.+++...+++ .++++|+...-.+|+..+-..- .+..+++ .+ .
T Consensus 285 ~~l~~a~~~~~~~~~~~d~~~l~~~i~~~l~~-------a~kdNd~IY~e~VP~~~~L~~i~~~~~vk~~~~~~~~~~~~ 357 (392)
T 1zb1_A 285 QQLISSLPFKTWLVEFIDFDGFKETLEKKQKE-------LIKDNDFIYHESVPAVVQVDSIKALDAIKSPTWEKILEPYM 357 (392)
T ss_dssp HHHHHHGGGCTTTTTTSCHHHHHHHHHHHHHH-------HHHHHHSSSCCCCCSSCCGGGSCCCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHHH-------HHHHhCccCcCCCCCccccccCCCcCcccccCCcccchhHH
Confidence 99999998743222333333444445444444 4445555444333332211100 0011111 11 1
Q ss_pred C---chhhhHHhhcCcccccccccccccc
Q psy12108 494 H---LPVEDLFKQLGPVAIFSAKHHWTAP 519 (665)
Q Consensus 494 ~---~~v~d~f~~LgP~svf~~~~~~~~~ 519 (665)
. ....|+|.+|.|+.|..+...+...
T Consensus 358 ~~~~~~~~dlF~~lvP~~v~~a~s~Y~e~ 386 (392)
T 1zb1_A 358 QDVANKYDSLYRGIIPLDVYEKESIYSEE 386 (392)
T ss_dssp HHHHHHHHHHHHHHC--------------
T ss_pred HhcccccchHHHhhCCHHHHHHHHHHHHH
Confidence 1 1127899999999998887666543
No 3
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=100.00 E-value=4.6e-60 Score=513.70 Aligned_cols=295 Identities=25% Similarity=0.378 Sum_probs=266.8
Q ss_pred ccccCCCCCCCCCCChHHHHHHHhhhcC---CChhhHHHHHHHHHHHHHHh--cCCCCCchhhhHHHHHHHHHHHHHhcc
Q psy12108 116 PMIPLGLKETKEIDVREPFKDFILEHYS---EDGTAYEDSVSEFMDMRQAM--RTPNRDNSGISLLFQYYNQLYFIERRF 190 (665)
Q Consensus 116 pmi~l~lK~T~~vD~~~~L~~~I~~~y~---e~~~~~~~~i~~l~~LR~~~--~~~~~~~~~~~~L~~Yy~qL~~l~~rf 190 (665)
+||++|||+|++|||..+|++||.++|+ |+++.|+++|++|++||+.+ ++++++++++++|.+||+||++|+.||
T Consensus 24 ~~l~~plK~t~~vd~~~~l~~~I~~~y~~~~e~~~~~~~~l~~l~~LR~~~~~~~~~~~~~~~~~L~~Y~~~L~~l~~rf 103 (380)
T 3c3r_A 24 TFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGALETLLRYYDQICSIEPKF 103 (380)
T ss_dssp CCCCCCCCCBCCCCCHHHHHHHHHHHCCCCSSSTTSHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHHHHTTTT
T ss_pred cccCCCCCCCCcCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHhhcCCCcChHHHHHHHHHHHHHHHHHcCC
Confidence 4999999999999999999999999999 89999999999999999985 457888999999999999999999999
Q ss_pred CCCCCCcceeEe-ecCCC------C-CcccccchhHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHH
Q psy12108 191 FPPDRSLGIYFE-YDSLT------G-VPSCQRTIAFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTY 262 (665)
Q Consensus 191 ~~~~~~~~v~F~-~dslt------~-~~~~q~sl~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~ 262 (665)
++++...+|.|+ +|+|+ | .++++.++.||++|||||||++||++|+.++|.+++|+|.||++||+|||+|+|
T Consensus 104 p~~~~~~~i~F~W~d~~~~~s~~~g~~~~~~~~l~fE~a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~~ 183 (380)
T 3c3r_A 104 PFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLH 183 (380)
T ss_dssp TCSSCCCCCCEEEECSSCCCCSSSCCCEEEESCHHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCccceeEEeecCCccccccCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Confidence 877777899999 89885 3 467899999999999999999999999999999999999999999999999999
Q ss_pred HHhhcc----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCccc
Q psy12108 263 LQENFT----NAPSMDLGPPMLDMLIQLMLAQARECLFQKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPEV 338 (665)
Q Consensus 263 l~e~~~----~~ps~Dls~~~L~~L~~lmLAQAQEc~~~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~~ 338 (665)
|++++. +.|+.||++++|.+|..+||||||||+|+|++.++. +..+ |||+|+||+++|++|.+.++ .
T Consensus 184 l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~---k~~l---iAkLa~~~~~~Y~~A~~~l~---~ 254 (380)
T 3c3r_A 184 IKETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKM---KDAI---IAKLANQAADYFGDAFKQCQ---Y 254 (380)
T ss_dssp HHHHHHHHCSSCCCTTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CHHH---HHHHHHHHHHHHHHHHHHHT---T
T ss_pred HHHhcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---ChhH---HHHHHHHHHHHHHHHHHHHc---c
Confidence 999984 689999999999999999999999999999998643 5554 89999999999999999998 5
Q ss_pred cCccchhHHHHHHHHHHHHHHHhhHHHhhhcccccccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHH
Q psy12108 339 KDYVPLSWVSLIQVKKEHYLALSHYYCASGLLTKSLANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHL 418 (665)
Q Consensus 339 ~~~~~~~W~~~~~~K~~~f~A~A~y~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahL 418 (665)
++.++++|..++++|..||+|+||||+|..+.+.. ++|+++|+|
T Consensus 255 ~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~------------------------------------k~GeaIa~L 298 (380)
T 3c3r_A 255 KDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQK------------------------------------KFGEEIARL 298 (380)
T ss_dssp CCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------------------------------CHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------------------------cHHHHHHHH
Confidence 77899999999999999999999999999877643 799999999
Q ss_pred HHHHHHHHHHHHHHhHhhhhcchhHHHHHHHHHHHhHHHH
Q psy12108 419 RSALLFHEESQRIYRMCRELRNKQALFQVLVQAHTLTLEM 458 (665)
Q Consensus 419 r~A~~~~eeAlRl~~~c~~lr~~~~L~~vl~~a~~~s~~~ 458 (665)
+.|...+++|.+. |+.+.+...+.+++...+++..++
T Consensus 299 ~~A~~~l~~a~~~---~~~~~~l~~l~~~i~~~l~~a~kd 335 (380)
T 3c3r_A 299 QHAAELIKTVASR---YDEYVNVKDFSDKINRALAAAKKD 335 (380)
T ss_dssp HHHHHHHHHHHHH---CTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---hcchHhHHHHHHHHHHHHHHHHHh
Confidence 9999999999986 555666667777777766655554
No 4
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=100.00 E-value=2.9e-56 Score=518.88 Aligned_cols=347 Identities=24% Similarity=0.361 Sum_probs=289.4
Q ss_pred cccCCCCCCCCCCChHHHHHHHhhhcC---CChhhHHHHHHHHHHHHHHhc--CCCCCchhhhHHHHHHHHHHHHHhccC
Q psy12108 117 MIPLGLKETKEIDVREPFKDFILEHYS---EDGTAYEDSVSEFMDMRQAMR--TPNRDNSGISLLFQYYNQLYFIERRFF 191 (665)
Q Consensus 117 mi~l~lK~T~~vD~~~~L~~~I~~~y~---e~~~~~~~~i~~l~~LR~~~~--~~~~~~~~~~~L~~Yy~qL~~l~~rf~ 191 (665)
||++|||+|++|||..||++||.++|+ ++++.|+++|.+|+.||+.+. +++++++++++|.+||+||++|+.|||
T Consensus 10 ~l~~plK~t~~vd~~~~l~~~I~~~y~~~~e~~~~~~~~l~~l~~lR~~~~~~~~~~~~~~~~~L~~Y~~~L~~l~~rfp 89 (704)
T 2xs1_A 10 FISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDKHEGALETLLRYYDQICSIEPKFP 89 (704)
T ss_dssp CCCCCCCCBCCCCSHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHGGGSC
T ss_pred hhcCCCCCCCcCCHHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999 789999999999999999853 567888999999999999999999998
Q ss_pred CCCCCcceeEe-ecCCC------C-CcccccchhHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHHH
Q psy12108 192 PPDRSLGIYFE-YDSLT------G-VPSCQRTIAFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTYL 263 (665)
Q Consensus 192 ~~~~~~~v~F~-~dslt------~-~~~~q~sl~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~l 263 (665)
+++...+|.|+ ||+|+ | .++++.++.||+|||||||||+||++|+.++|.+++|+|.||++||+|||+|+||
T Consensus 90 ~~~~~~~i~F~W~d~~~~~s~~~~~~~~~~~~l~fE~a~vLfNlaal~s~~A~~~~r~~~~~lK~A~~~fq~AAG~f~~l 169 (704)
T 2xs1_A 90 FSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHI 169 (704)
T ss_dssp TTTCSSCCCEEEECTTCCCSSSSSCCEEEECCHHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccceeeeecCcccccccCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 77777899999 89885 2 4678999999999999999999999999999999999999999999999999999
Q ss_pred Hhhcc----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q psy12108 264 QENFT----NAPSMDLGPPMLDMLIQLMLAQARECLFQKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPEVK 339 (665)
Q Consensus 264 ~e~~~----~~ps~Dls~~~L~~L~~lmLAQAQEc~~~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~~~ 339 (665)
++++. +.|+.||++++|.+|..+||||||||+|+||+.++. +..+ |||+|++|+++|++|++.+. ++
T Consensus 170 ~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~~---k~~l---iAkLa~~~~~~Y~~A~~~l~---~~ 240 (704)
T 2xs1_A 170 KETVLSALSREPTVDISPDTVGTLSLIMLAQAQEVFFLKATRDKM---KDAI---IAKLANQAADYFGDAFKQCQ---YK 240 (704)
T ss_dssp HHHHHHHCSSCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CHHH---HHHHHHHHHHHHHHHHHHHH---TC
T ss_pred HHhcccccCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHhcCC---ChhH---HHHHHHHHHHHHHHHHHHHc---cc
Confidence 99984 689999999999999999999999999999998643 5554 89999999999999999987 56
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHHHhhhcccccccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHHH
Q psy12108 340 DYVPLSWVSLIQVKKEHYLALSHYYCASGLLTKSLANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHLR 419 (665)
Q Consensus 340 ~~~~~~W~~~~~~K~~~f~A~A~y~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahLr 419 (665)
+.++++|..++++|..||.|+||||+|..+.+.. ++|+++|+|+
T Consensus 241 ~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~------------------------------------k~GeaIa~L~ 284 (704)
T 2xs1_A 241 DTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQY------------------------------------YFGEEIARLQ 284 (704)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------------------------------CHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh------------------------------------HHHHHHHHHH
Confidence 7899999999999999999999999999887643 7999999999
Q ss_pred HHHHHHHHHHHHHhHhhhhcchhHHHHHHHHHHHhHHHH----hh-hhcchhhhhhhccCCCCCCCCccccCCCCCCCCC
Q psy12108 420 SALLFHEESQRIYRMCRELRNKQALFQVLVQAHTLTLEM----YA-DVEEEDEFNTMYEAPNITPSTKFQLTLTPPDFAH 494 (665)
Q Consensus 420 ~A~~~~eeAlRl~~~c~~lr~~~~L~~vl~~a~~~s~~~----y~-~~~~edd~~~~~~ap~I~p~t~~~~~~~~P~f~~ 494 (665)
.|...+++|.+. |+...+...+.+++...+.+..++ |- .++..+++..+.+++.+.|.. +.. +..|.
T Consensus 285 ~A~~~l~~a~~~---~~~~~~~~~l~~~i~~~l~~~~kdNd~IY~e~VP~~~~L~~i~~~~lvk~~~-~~~-p~~~~--- 356 (704)
T 2xs1_A 285 HAAELIKTVASR---YDEYVNVKDFSDKINRALAAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTP-VNV-PISQK--- 356 (704)
T ss_dssp HHHHHHHHHHHH---STTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGSCCCCCCCCCCCCC-CCS-CCSTT---
T ss_pred HHHHHHHHHHHH---hcchHhHHHHHHHHHHHHHHHHHhhCeeeccCCCCccccCCccCccccccCC-CCc-ccccc---
Confidence 999999999975 555556666777777766665554 21 133333333222223232221 111 01122
Q ss_pred chhhhHHhhcCccccccccccccc
Q psy12108 495 LPVEDLFKQLGPVAIFSAKHHWTA 518 (665)
Q Consensus 495 ~~v~d~f~~LgP~svf~~~~~~~~ 518 (665)
..|+|.+|.|+.|+.+...+..
T Consensus 357 --~~dlF~~lVP~~v~ea~s~Y~e 378 (704)
T 2xs1_A 357 --FTDLFEKMVPVSVQQSLAAYNQ 378 (704)
T ss_dssp --CCCTTSSSCCHHHHHHHHHHHH
T ss_pred --hhHHHHcccCHHHHHHHHHHHH
Confidence 2489999999988866555543
No 5
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=100.00 E-value=4.8e-49 Score=426.70 Aligned_cols=262 Identities=18% Similarity=0.201 Sum_probs=228.8
Q ss_pred CCCCCCCCCCChHHHHHHHhhhcCCChhhHHHHHHHHHHHHHH----hcCCCCCchhh-hHHHHHHHHHHHHHhccCC--
Q psy12108 120 LGLKETKEIDVREPFKDFILEHYSEDGTAYEDSVSEFMDMRQA----MRTPNRDNSGI-SLLFQYYNQLYFIERRFFP-- 192 (665)
Q Consensus 120 l~lK~T~~vD~~~~L~~~I~~~y~e~~~~~~~~i~~l~~LR~~----~~~~~~~~~~~-~~L~~Yy~qL~~l~~rf~~-- 192 (665)
-|||.|..|+|.. .-++.+ ....+.+.++..+|.. +++|+.+.+++ +.|.+||.+|++|..||..
T Consensus 10 ~~lk~T~~v~F~~-------~~~~~~-~~~~~~~~~l~~~R~~l~~~~~~~~~~~~~~~~~l~~Yl~~L~~l~~~~~~~~ 81 (376)
T 3r9m_A 10 NPLKATAPVSFNY-------YGVVTG-PSASKICNDLRSSRARLLELFTDLSCNPEMMKNAADSYFSLLQGFINSLDEST 81 (376)
T ss_dssp CCCCCBCCCCCCC-------GGGBCS-HHHHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHGGGTBCSSCTT
T ss_pred CCCCCCceeeeee-------eeecCC-chHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 3899999999972 223344 3567888888887765 46788777765 9999999999999999965
Q ss_pred CCCC--cceeEe-ecCCC-CCcccccchhHHHHHHHHHHHHHHHHHHhhc---CCCChhhHHHHHHHHHHHHHhHHHHHh
Q psy12108 193 PDRS--LGIYFE-YDSLT-GVPSCQRTIAFEKACVLFNMAAIYTQMAAKQ---DRLTSTGLDQAVDNFLRAAGTFTYLQE 265 (665)
Q Consensus 193 ~~~~--~~v~F~-~dslt-~~~~~q~sl~fEkasVLfNiaal~sqia~~~---~r~t~~glK~A~~~Fq~AAG~f~~l~e 265 (665)
++.. .+|.|+ ||+|+ +++++++++.||++||||||||+|||+|+++ +|.+++|+|.||++||+|||+|+||++
T Consensus 82 ~~~~l~~~i~F~W~dsl~~~~~~~~~sl~fE~a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~~ 161 (376)
T 3r9m_A 82 QESKLRYIQNFKWTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKE 161 (376)
T ss_dssp CBCTTTTSCCEEECCTTSTTCCEEESCHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEeeCCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 479999 99998 5788999999999999999999999999986 678999999999999999999999999
Q ss_pred hccCC------CCCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q psy12108 266 NFTNA------PSMDLGPPMLDMLIQLMLAQARECLFQKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPEVK 339 (665)
Q Consensus 266 ~~~~~------ps~Dls~~~L~~L~~lmLAQAQEc~~~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~~~ 339 (665)
++.+. |+.||++++|.+|..+||||||||+|+|++.++ ++..+ |||+|+|++++|++|++.+++ +.
T Consensus 162 ~~~~~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~~~---~k~~l---iAKLa~q~~~~Y~~a~~~l~~--~~ 233 (376)
T 3r9m_A 162 SHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIELK---HAPGL---IAALAYETANFYQKADHTLSS--LE 233 (376)
T ss_dssp HTGGGCSSCCCTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCHHH---HHHHHHHHHHHHHHHHHHHTT--SC
T ss_pred hhhhcccCCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHHHhcC---CChHH---HHHHHHHHHHHHHHHHHHHHh--cc
Confidence 98754 899999999999999999999999999999753 35554 899999999999999999985 45
Q ss_pred CccchhHHHHHHHHHHHHHHHhhHHHhhhcccccccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHHH
Q psy12108 340 DYVPLSWVSLIQVKKEHYLALSHYYCASGLLTKSLANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHLR 419 (665)
Q Consensus 340 ~~~~~~W~~~~~~K~~~f~A~A~y~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahLr 419 (665)
+.++.+|..++++|..||.|+||||+|+.+.+.. ++|+++++|+
T Consensus 234 ~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~------------------------------------k~GeaIa~L~ 277 (376)
T 3r9m_A 234 PAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASD------------------------------------KCGEAIRSLQ 277 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------------------------------------CHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------------------------------------ChHHHHHHHH
Confidence 6789999999999999999999999999987653 7999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy12108 420 SALLFHEESQRIYR 433 (665)
Q Consensus 420 ~A~~~~eeAlRl~~ 433 (665)
.|...+++|.+..+
T Consensus 278 ~A~~~l~~a~~~~~ 291 (376)
T 3r9m_A 278 EAEKLYAKAEALCK 291 (376)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999854
No 6
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.65 E-value=6e-16 Score=131.03 Aligned_cols=80 Identities=18% Similarity=0.334 Sum_probs=73.2
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeE
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSL 595 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L 595 (665)
+..+|+|+|.|+ ..++|||+++++ .|..|.+||||+++||++||+|++|||+++.+++|++++++|+..|+.|+|
T Consensus 2 ~~~~r~v~l~k~--~~g~~Gf~i~~g---~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L 76 (82)
T 1r6j_A 2 AMDPRTITMHKD--STGHVGFIFKNG---KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTI 76 (82)
T ss_dssp TTCCEEEEEECC--TTSCCCEEEETT---EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCceEEEEEEEC--CCCCeEEEEECC---EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEE
Confidence 456899999997 557899999986 489999999999999999999999999999999999999999988999999
Q ss_pred EEEcC
Q psy12108 596 KLVTP 600 (665)
Q Consensus 596 ~V~~~ 600 (665)
+|++.
T Consensus 77 ~v~p~ 81 (82)
T 1r6j_A 77 TIMPA 81 (82)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
No 7
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.55 E-value=5.9e-15 Score=132.33 Aligned_cols=98 Identities=34% Similarity=0.642 Sum_probs=87.5
Q ss_pred cccccccccccceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 508 AIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 508 svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
++|++++.|..+|+|++.|+ ..+|||.+.+..+++|..|.+++||+++||++||+|++|||++|.++++.+++++|+
T Consensus 5 ~~~~~~~~~~~~r~v~l~~~---~~~~G~~l~~~~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~ 81 (111)
T 1vae_A 5 SSGSASKRWSPPRGIHFTVE---EGDLGFTLRGNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLK 81 (111)
T ss_dssp CSCCCCCEECCCCCCCEECC---SSCCSCCEESSSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ceeecccCCCCCeEEEEEcC---CCcccEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 58899999999999999995 469999999888999999999999999999999999999999999999999999999
Q ss_pred hhCC-ceeEEEEcCCCCCCccc
Q psy12108 588 DAGK-CLSLKLVTPMHKNNNVH 608 (665)
Q Consensus 588 ~~g~-~v~L~V~~~~~~~~~~~ 608 (665)
..++ .+.|+|.+..+......
T Consensus 82 ~~~~~~v~l~V~~~~~~~~~~~ 103 (111)
T 1vae_A 82 SFGGEEVEMKVVSLLDSTSSMH 103 (111)
T ss_dssp HTTTSEECEEEECEECCCCCCC
T ss_pred hCCCceEEEEEEecCCCccccC
Confidence 8755 69999998766554433
No 8
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.50 E-value=7.2e-14 Score=124.81 Aligned_cols=84 Identities=36% Similarity=0.637 Sum_probs=75.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC-ceeEE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK-CLSLK 596 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~-~v~L~ 596 (665)
.+|+|.|.|+ ..+|||++.+..|++|..|.|||||+++||++||+|++|||+++.++++.+++++|+..++ .|+|+
T Consensus 23 ~~r~v~l~k~---~~~~G~~l~~~~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 23 MPRSIRFTAE---EGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp SCEEEEECCG---GGCCCEEEESSSSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCEEEEEEeC---CCceeEEEeCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 5799999996 4699999998889999999999999999999999999999999999999999999998866 59999
Q ss_pred EEcCCCCC
Q psy12108 597 LVTPMHKN 604 (665)
Q Consensus 597 V~~~~~~~ 604 (665)
|+++.+..
T Consensus 100 V~~~~~~~ 107 (109)
T 2vsv_A 100 VVSLLDEV 107 (109)
T ss_dssp EESCC---
T ss_pred EEECCCcc
Confidence 99887654
No 9
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.50 E-value=8.5e-14 Score=128.60 Aligned_cols=96 Identities=29% Similarity=0.522 Sum_probs=79.6
Q ss_pred hHHhhcCcccccccccccccceeEEeccCCCCCcceeEEEEcCC----------------CeEEEEeCCCChhhhcCCCC
Q psy12108 499 DLFKQLGPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGDA----------------PVIVASVDSGSLAQFGGMKD 562 (665)
Q Consensus 499 d~f~~LgP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~----------------~v~V~~V~pgspA~~aGLk~ 562 (665)
+.|.-.+|++.+.. .+|+|+|.|. ..++|||+|.++. +++|..|.+||||+++||++
T Consensus 13 ~~~~~~~~~s~~~~-----~~r~v~l~r~--~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~ 85 (132)
T 3l4f_D 13 DPLVPRGSGSDYII-----KEKTVLLQKK--DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRM 85 (132)
T ss_dssp ------CCSCCCCC-----CCCEEEEECC--TTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCT
T ss_pred CCCccCCCCCCcCC-----CCEEEEEEEC--CCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCC
Confidence 34555566666654 4788999996 4579999999764 48999999999999999999
Q ss_pred CCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCC
Q psy12108 563 GDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 563 GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~ 601 (665)
||+|++|||++|.++++.+++.+|++.|+.+.|+|++..
T Consensus 86 GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 86 GDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp TCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCC
T ss_pred CCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 999999999999999999999999999999999998754
No 10
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.50 E-value=1.3e-13 Score=118.38 Aligned_cols=83 Identities=30% Similarity=0.465 Sum_probs=75.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..+|+|++.|++ .||||++.++. +++|..|.+||||+++||++||+|++|||+++.+++|.++.++|+..|..+
T Consensus 3 ~~~r~v~l~k~~---~g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 79 (90)
T 2he4_A 3 LRPRLCHLRKGP---QGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEA 79 (90)
T ss_dssp TCCEEEEEECBT---TBCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEE
T ss_pred CCcEEEEEEECC---CCccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 468999999964 49999999764 799999999999999999999999999999999999999999999988899
Q ss_pred eEEEEcCCC
Q psy12108 594 SLKLVTPMH 602 (665)
Q Consensus 594 ~L~V~~~~~ 602 (665)
.|+|.++..
T Consensus 80 ~l~v~r~~~ 88 (90)
T 2he4_A 80 RLLVVGPST 88 (90)
T ss_dssp EEEEECCCC
T ss_pred EEEEEccCC
Confidence 999998753
No 11
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.47 E-value=3e-13 Score=116.14 Aligned_cols=82 Identities=29% Similarity=0.505 Sum_probs=73.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
.||+|++.|++ .||||++.++. +++|..|.+||||+++||++||+|++|||+++.++++.+++.+++..++.+.
T Consensus 3 ~~r~v~l~r~~---~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 79 (91)
T 1g9o_A 3 LPRLCCLEKGP---NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVR 79 (91)
T ss_dssp CCEEEEEECBT---TBCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred ccEEEEEEeCC---CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEE
Confidence 48999999974 49999998764 8999999999999999999999999999999999999999999999877777
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
+.+++...
T Consensus 80 ~~~~~r~~ 87 (91)
T 1g9o_A 80 LLVVDPET 87 (91)
T ss_dssp EEEECCCC
T ss_pred EEEEcCCc
Confidence 77776544
No 12
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=1.6e-13 Score=118.17 Aligned_cols=81 Identities=28% Similarity=0.436 Sum_probs=74.7
Q ss_pred cceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
.+|+|++.|+ ..+|||.+.+..+++|..|.+||||+++||++||+|++|||+++.++++.++..+++..+..+.|+|
T Consensus 3 ~~r~v~l~~~---~~g~G~~l~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 79 (91)
T 2f5y_A 3 RYRQITIPRG---KDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLV 79 (91)
T ss_dssp EEEEEEEECB---TTBTSEEEECSSSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEEEeC---CCCccEEEecCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 4789999996 4589999999889999999999999999999999999999999999999999999998888899999
Q ss_pred EcCC
Q psy12108 598 VTPM 601 (665)
Q Consensus 598 ~~~~ 601 (665)
.+..
T Consensus 80 ~R~~ 83 (91)
T 2f5y_A 80 WRMV 83 (91)
T ss_dssp EECC
T ss_pred EeCC
Confidence 8764
No 13
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.47 E-value=1.7e-13 Score=119.09 Aligned_cols=82 Identities=28% Similarity=0.494 Sum_probs=73.9
Q ss_pred cccceeEEeccCCCCCcceeEEEEc-------C----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRG-------D----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQ 584 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g-------~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~ 584 (665)
|..+|+|++.|+ ...+|||++.+ + .+++|..|.++|||+++||++||+|++|||+++.++++.++..
T Consensus 2 ~~~~r~v~l~k~--~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~ 79 (96)
T 2ego_A 2 SQQRKVLTLEKG--DNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVD 79 (96)
T ss_dssp CCCEEEEEEECC--TTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCccEEEEEEeC--CCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 457899999997 45799999996 2 2789999999999999999999999999999999999999999
Q ss_pred HHHhhCCceeEEEEc
Q psy12108 585 LIKDAGKCLSLKLVT 599 (665)
Q Consensus 585 ~ik~~g~~v~L~V~~ 599 (665)
+|+..++.++|+|.+
T Consensus 80 ~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 80 IIKASGNVLRLETLY 94 (96)
T ss_dssp HHHHTTTEEEEEEEC
T ss_pred HHHhCCCeEEEEEEE
Confidence 999988899999875
No 14
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.47 E-value=4.5e-14 Score=121.55 Aligned_cols=86 Identities=24% Similarity=0.455 Sum_probs=72.4
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
|..||+|+|.|++ .+|||++.+. .+++|..|.|||||+++||++||+|++|||+++.++++.++..+|+..|..
T Consensus 1 ~~~pr~v~l~k~~---~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2vsp_A 1 SMKPKLCRLAKGE---NGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKN 77 (91)
T ss_dssp -CCEEEEEEECBT---TBTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSE
T ss_pred CCCcEEEEEEeCC---CcccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 3578999999964 3899999754 488999999999999999999999999999999999999999999988889
Q ss_pred eeEEEEcCCCCC
Q psy12108 593 LSLKLVTPMHKN 604 (665)
Q Consensus 593 v~L~V~~~~~~~ 604 (665)
++|+|.+.....
T Consensus 78 v~l~v~r~~~~~ 89 (91)
T 2vsp_A 78 VTLLVCGKKAQD 89 (91)
T ss_dssp EEEEEEC-----
T ss_pred EEEEEEeCCccc
Confidence 999999876543
No 15
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.46 E-value=1.7e-13 Score=140.71 Aligned_cols=89 Identities=24% Similarity=0.432 Sum_probs=80.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
.+|+|+|.|+ ..+||||+|.|+ .|++|..|.+||||++ +||++||+|++|||++|.+++|.+++.+|+..|+.
T Consensus 77 ~~r~V~L~k~--~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 77 QRRRVTVRKA--DAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp SSEEECCCTT--TTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred ccEEEEEEeC--CCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 5799999997 468999999986 3899999999999999 89999999999999999999999999999999999
Q ss_pred eeEEEEcCCCCCCccc
Q psy12108 593 LSLKLVTPMHKNNNVH 608 (665)
Q Consensus 593 v~L~V~~~~~~~~~~~ 608 (665)
|+|+|.+......+..
T Consensus 155 V~L~V~R~~~~~~~~~ 170 (263)
T 1z87_A 155 VVLEVKYMKEVSPYFK 170 (263)
T ss_dssp CCEEEECCSSSSCSSS
T ss_pred EEEEEEeCcccccccc
Confidence 9999998766554444
No 16
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.46 E-value=2.3e-13 Score=118.24 Aligned_cols=85 Identities=35% Similarity=0.602 Sum_probs=76.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC------CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA------PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~------~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
.||+|+|.|++ .+|||++.+.. +++|..|.++|||+++||++||+|++|||+++.++++.++..+++..|.
T Consensus 3 ~~r~v~l~k~~---~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (96)
T 2v90_A 3 KPRCLHLEKGP---QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS 79 (96)
T ss_dssp CCEEEEEECBT---TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCEEEEEEeCC---CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 58999999964 49999998732 6999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEcCCCCCC
Q psy12108 592 CLSLKLVTPMHKNN 605 (665)
Q Consensus 592 ~v~L~V~~~~~~~~ 605 (665)
.+.|+|.+......
T Consensus 80 ~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 80 CVSLTVVDPEADRE 93 (96)
T ss_dssp EEEEEEECCCTTSC
T ss_pred EEEEEEECCCCccc
Confidence 99999998765443
No 17
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.46 E-value=1.7e-13 Score=124.51 Aligned_cols=86 Identities=21% Similarity=0.404 Sum_probs=72.7
Q ss_pred ccccceeEEeccCCCCCcceeEEEEcCC-------CeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRGDA-------PVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g~~-------~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
.+..+|+|.|.|+ ...+|||++.++. |++|..|.|||||+++ ||++||+|++|||+++.++++.+++.+|
T Consensus 21 ~~~~~~~v~l~k~--~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l 98 (120)
T 2iwo_A 21 QSMGLRTVEMKKG--PTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLL 98 (120)
T ss_dssp ----CEEEEEEC------CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CCCCcEEEEEEcC--CCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3456899999997 4579999999752 7999999999999997 9999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCCC
Q psy12108 587 KDAGKCLSLKLVTPMH 602 (665)
Q Consensus 587 k~~g~~v~L~V~~~~~ 602 (665)
+..++.|+|+|.+...
T Consensus 99 ~~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 99 KNASGSIEMQVVAGGD 114 (120)
T ss_dssp HHCCSEEEEEEECCTT
T ss_pred HcCCCeEEEEEEECCc
Confidence 9999899999998754
No 18
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.46 E-value=3.2e-13 Score=121.73 Aligned_cols=89 Identities=26% Similarity=0.438 Sum_probs=80.3
Q ss_pred ccccccceeEEeccCCCCCcceeEEEEcC-------------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCC
Q psy12108 513 KHHWTAPRSIQLQRANNSDTGFGFSVRGD-------------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSP 578 (665)
Q Consensus 513 ~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-------------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~ 578 (665)
...|..+|+|.|.|+ ...+|||++.|+ .+++|..|.++|||+++| |++||+|++|||+++.+++
T Consensus 10 ~~~~~~~~~v~l~k~--~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~ 87 (117)
T 2ehr_A 10 FSHWGPPRIVEIFRE--PNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNAS 87 (117)
T ss_dssp SSCBCCCEEEEECCC--SSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCC
T ss_pred cccCCCCEEEEEEeC--CCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 457889999999997 467999999876 389999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhhCCceeEEEEcCCCC
Q psy12108 579 HEEVVQLIKDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 579 ~~evv~~ik~~g~~v~L~V~~~~~~ 603 (665)
+.+++.+++..|..+.|+|.+....
T Consensus 88 ~~~~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 88 HSEAVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHHHHHHHHTSCSSEEEEECCBSCC
T ss_pred HHHHHHHHHcCCCeEEEEEEECCCC
Confidence 9999999999889999999876543
No 19
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.46 E-value=1.7e-13 Score=118.55 Aligned_cols=85 Identities=26% Similarity=0.553 Sum_probs=74.5
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..||+|++.|+ ..+|||++.++. +++|..|.+||||+++||++||+|++|||+++.+++|.+++.+|+..++.+
T Consensus 4 ~~~r~v~l~~~---~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 4 HQPRVVVIKKG---SNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCCEEEEEECB---TTBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCcEEEEEecC---CCcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 46899999996 459999998764 899999999999999999999999999999999999999999999988889
Q ss_pred eEEEEcCCCCC
Q psy12108 594 SLKLVTPMHKN 604 (665)
Q Consensus 594 ~L~V~~~~~~~ 604 (665)
.+.+++.....
T Consensus 81 ~~~~~r~~~~~ 91 (95)
T 3r68_A 81 TLLVLDKELER 91 (95)
T ss_dssp EEEEEECC---
T ss_pred EEEEECCcccc
Confidence 99888776544
No 20
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=3.3e-13 Score=115.60 Aligned_cols=82 Identities=22% Similarity=0.396 Sum_probs=74.1
Q ss_pred ceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeE
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSL 595 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L 595 (665)
.|.|+|.|+ ...+|||++.++ .+++|..|.+||||++ +||++||.|++|||+++.+++|++++++|++.+..++|
T Consensus 2 ~r~V~l~K~--~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (88)
T 1kwa_A 2 SRLVQFQKN--TDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF 79 (88)
T ss_dssp CEEEEEEEC--SSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEE
T ss_pred eEEEEEEeC--CCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 588999997 457999999974 4899999999999999 99999999999999999999999999999988669999
Q ss_pred EEEcCCC
Q psy12108 596 KLVTPMH 602 (665)
Q Consensus 596 ~V~~~~~ 602 (665)
+|.+...
T Consensus 80 ~v~r~~~ 86 (88)
T 1kwa_A 80 KIVPSYR 86 (88)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9988654
No 21
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.45 E-value=2e-13 Score=120.46 Aligned_cols=90 Identities=21% Similarity=0.443 Sum_probs=75.6
Q ss_pred cccccceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
+.|..+|.|.+.|. ...+|||++.++. |++|..|.+||||++ +||++||+|++|||+++.++++.+++.+++.
T Consensus 5 ~~~~~~~~v~l~~~--~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 82 (103)
T 2dc2_A 5 QGVGPIRKVLLLKE--DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ 82 (103)
T ss_dssp ----CEEEEEEECC--SSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHH
T ss_pred CCCCCcEEEEEEeC--CCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35667889999987 5689999999763 789999999999999 5999999999999999999999999999999
Q ss_pred hCCceeEEEEcCCCCCC
Q psy12108 589 AGKCLSLKLVTPMHKNN 605 (665)
Q Consensus 589 ~g~~v~L~V~~~~~~~~ 605 (665)
.++.++|+|.+......
T Consensus 83 ~~~~v~l~v~~~~~~~~ 99 (103)
T 2dc2_A 83 QRGEIEFEVVYVALEHH 99 (103)
T ss_dssp CCSEEEEEEEECC----
T ss_pred CCCcEEEEEEecCCcch
Confidence 98899999998765443
No 22
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.45 E-value=4.7e-13 Score=118.58 Aligned_cols=85 Identities=33% Similarity=0.591 Sum_probs=74.0
Q ss_pred ccccceeEEeccCCCCCcceeEEEEcC---------------CC-eEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCC
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRGD---------------AP-VIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSP 578 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g~---------------~~-v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~ 578 (665)
.|..||+|.|.|++ .+|||++.++ .| ++|..|.++|||+++||++||+|++|||+++.+++
T Consensus 3 ~~~~~r~v~l~k~~---~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~ 79 (107)
T 3qe1_A 3 HGGSPRVVRIVKSE---SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGAT 79 (107)
T ss_dssp ---CCEEEEEECBT---TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCC
T ss_pred CCCCcEEEEEEECC---CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 46789999999963 4999999986 23 35999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 579 HEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 579 ~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
+.+++.+|+..|..+.|+|.+...
T Consensus 80 ~~~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 80 HKQVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHHHHcCCCEEEEEEEcCCC
Confidence 999999999889999999998654
No 23
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=2.3e-13 Score=123.03 Aligned_cols=94 Identities=26% Similarity=0.459 Sum_probs=75.6
Q ss_pred hhcCcccccccccccccceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECC
Q psy12108 502 KQLGPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGD 571 (665)
Q Consensus 502 ~~LgP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG 571 (665)
..++|++.|..... .+.|.+.|++ .||||++.++ .+++|..|.+||||+++| |++||+|++|||
T Consensus 11 ~~~dp~s~y~~~~~---~~~v~l~k~~---~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng 84 (117)
T 2byg_A 11 VDLGTENLYFQSMT---VVEIKLFKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNN 84 (117)
T ss_dssp ---------CEEEE---EEEEEEECBT---TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETT
T ss_pred cCCCCcccccCCCc---eEEEEEEeCC---CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC
Confidence 45678888877654 5678899863 6999999964 379999999999999999 999999999999
Q ss_pred EecCCCChHHHHHHHHhhCCceeEEEEcCC
Q psy12108 572 RDVKWSPHEEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 572 ~~v~~~~~~evv~~ik~~g~~v~L~V~~~~ 601 (665)
+++.++++.+++.+++..|..|+|+|.+..
T Consensus 85 ~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 85 YSLEEVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp EECTTCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred EECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 999999999999999988889999998754
No 24
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.44 E-value=1.8e-13 Score=124.02 Aligned_cols=84 Identities=24% Similarity=0.453 Sum_probs=76.1
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCC-------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDA-------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~-------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
+..+|+|.+.|+ ...+|||++.++. |++|..|.+||||+++| |++||+|++|||+++.++++.+++.+|+
T Consensus 22 ~~~~~~v~l~k~--~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~ 99 (118)
T 3b76_A 22 SMHEKVVNIQKD--PGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLK 99 (118)
T ss_dssp EEEEEEEEEECC--TTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHH
T ss_pred CCCcEEEEEEeC--CCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 345788999987 4689999999863 79999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCC
Q psy12108 588 DAGKCLSLKLVTPM 601 (665)
Q Consensus 588 ~~g~~v~L~V~~~~ 601 (665)
..++.|+|+|.+..
T Consensus 100 ~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 100 RTSSSIVLKALEVK 113 (118)
T ss_dssp SCCSEEEEEEEEEE
T ss_pred cCCCeEEEEEEECC
Confidence 99999999998754
No 25
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=3.2e-13 Score=119.49 Aligned_cols=92 Identities=23% Similarity=0.376 Sum_probs=81.1
Q ss_pred ccccceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
.+..||+|+|.|+ ..+|||++.+. .+++|..|.++|||+++||++||+|++|||+++.++++.+++..++..++
T Consensus 5 ~~~~~r~v~l~k~---~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 81 (106)
T 2eei_A 5 SSGQPRLCYLVKE---GGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGS 81 (106)
T ss_dssp CCSSSEEEEEECC---SSSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCS
T ss_pred CCCCCEEEEEEEC---CCCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4668999999994 56999999654 48999999999999999999999999999999999999999999998889
Q ss_pred ceeEEEEcCCCCCCcccC
Q psy12108 592 CLSLKLVTPMHKNNNVHH 609 (665)
Q Consensus 592 ~v~L~V~~~~~~~~~~~~ 609 (665)
.+.|+|.+......+...
T Consensus 82 ~v~l~v~r~~~~~~~~~~ 99 (106)
T 2eei_A 82 RVMFLLVDKETDKRHVEQ 99 (106)
T ss_dssp EEEEEECCTTTSCCCCSC
T ss_pred eEEEEEEcCchhhHHHhc
Confidence 999999988766655543
No 26
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.43 E-value=1.3e-13 Score=116.42 Aligned_cols=80 Identities=35% Similarity=0.647 Sum_probs=73.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
.+|+|++.|+ ..+|||++.++.+++|..|.+||||+++||++||+|++|||+++.++++.+++.+++..+..++|+|
T Consensus 2 ~~r~v~l~~~---~~g~G~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 78 (83)
T 2kv8_A 2 RVRSVEVARG---RAGYGFTLSGQAPCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVI 78 (83)
T ss_dssp CEEEEEECCC---SSCCSCBCCCSSSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEE
T ss_pred CcEEEEEEeC---CCcccEEEEcCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 5789999996 4699999998889999999999999999999999999999999999999999999988888899999
Q ss_pred EcC
Q psy12108 598 VTP 600 (665)
Q Consensus 598 ~~~ 600 (665)
.+.
T Consensus 79 ~R~ 81 (83)
T 2kv8_A 79 AEG 81 (83)
T ss_dssp ECC
T ss_pred EcC
Confidence 764
No 27
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=3.1e-13 Score=122.15 Aligned_cols=84 Identities=30% Similarity=0.489 Sum_probs=75.6
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
+..+|+|+|.|++ .||||++.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 23 ~~~~~~v~L~k~~---~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 99 (117)
T 2fne_A 23 MPQCKSITLERGP---DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILK 99 (117)
T ss_dssp CCEEEEEEECCBT---TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCccEEEEEEeCC---CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5578899999964 5999999875 379999999999999998 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCC
Q psy12108 588 DAGKCLSLKLVTPMH 602 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~ 602 (665)
..++.|+|+|.+.+.
T Consensus 100 ~~~~~v~l~v~R~g~ 114 (117)
T 2fne_A 100 RTKGTVTLMVLSSDE 114 (117)
T ss_dssp HCCSSEEEEEEECSC
T ss_pred cCCCeEEEEEEeCCc
Confidence 888889999988654
No 28
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=99.42 E-value=1e-13 Score=115.90 Aligned_cols=57 Identities=26% Similarity=0.286 Sum_probs=54.1
Q ss_pred HHHHhhhhhhHhhHHHHHH----------HHhhhh-hhhhhhhhhhhhHhHhhHHHHHHHHhhhccce
Q psy12108 11 IAQMVTYGDSKHNQRNVAQ----------LQATTN-RKLKETVALELSFVNSNLQLLKEQLAELNSSV 67 (665)
Q Consensus 11 ~~~~~q~~r~~~~~~~~~~----------~~a~~~-~~~~~~v~lels~~~s~lq~l~~~l~~ln~~~ 67 (665)
+.++||.+|+.||++|+|| +||||| +|++++|++||+|+|++|+.|++||++||+++
T Consensus 19 ~q~~le~~r~~ir~eI~KElKiKeGaENL~katt~~kk~~~~V~~eL~~sn~kl~~L~~eL~eL~a~~ 86 (86)
T 1cxz_B 19 VQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQELHAHV 86 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3389999999999999999 689999 99999999999999999999999999999875
No 29
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=7.7e-13 Score=119.48 Aligned_cols=89 Identities=13% Similarity=0.319 Sum_probs=77.7
Q ss_pred ccccccceeEEeccCCCCCcceeEEEEcC-----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 513 KHHWTAPRSIQLQRANNSDTGFGFSVRGD-----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 513 ~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
......++.|.|.+. ...+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++++++.+|
T Consensus 10 ~~~~~~~~~v~l~k~--~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l 87 (117)
T 1v62_A 10 VANASGPLMVEIVKT--PGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87 (117)
T ss_dssp SCCSSSSEEEEEECC--TTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHH
T ss_pred ccCCCCcEEEEEEcC--CCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 334557889999996 347999999875 249999999999999999 999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCCCC
Q psy12108 587 KDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 587 k~~g~~v~L~V~~~~~~ 603 (665)
+..|..|+|+|.+....
T Consensus 88 ~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 88 ASISEKVRLEILPVPQS 104 (117)
T ss_dssp HSCSSEEEEEECCBTTB
T ss_pred HhCCCeEEEEEEECCCC
Confidence 98889999999886543
No 30
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.42 E-value=5.4e-13 Score=113.56 Aligned_cols=79 Identities=24% Similarity=0.532 Sum_probs=71.9
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
++|+|++.|. ...+|||++.++. |++|..|.|||||++ +||++||+|++|||+++.++++.+++.+++..++.
T Consensus 2 ~~~~v~l~~~--~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 2 PIRKVLLLKE--DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 79 (87)
T ss_dssp CCEEEEEECC--TTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSE
T ss_pred CEEEEEEEEC--CCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5788999997 5679999998763 789999999999999 79999999999999999999999999999998888
Q ss_pred eeEEEE
Q psy12108 593 LSLKLV 598 (665)
Q Consensus 593 v~L~V~ 598 (665)
++|+|.
T Consensus 80 v~l~v~ 85 (87)
T 4e34_A 80 IEFEVV 85 (87)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888875
No 31
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.41 E-value=9.5e-13 Score=113.89 Aligned_cols=83 Identities=14% Similarity=0.354 Sum_probs=73.4
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GK 591 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~ 591 (665)
..++.|.+.|+ .++|||+|.++ ..++|++|.+||+|++ +.|++||.|++|||+++.+++|.+++++|+.. |.
T Consensus 4 g~~k~V~l~K~---~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~ 80 (95)
T 3gge_A 4 GIEKEVNVYKS---EDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEE 80 (95)
T ss_dssp EEEEEEEEECC---SSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTC
T ss_pred CeEEEEEEEEC---CCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCC
Confidence 35688999995 46999999963 3789999999999999 56999999999999999999999999999996 56
Q ss_pred ceeEEEEcCCC
Q psy12108 592 CLSLKLVTPMH 602 (665)
Q Consensus 592 ~v~L~V~~~~~ 602 (665)
+++|++++|..
T Consensus 81 ~~~L~lv~p~~ 91 (95)
T 3gge_A 81 LFTMKLIEPKK 91 (95)
T ss_dssp EEEEEEEEECS
T ss_pred EEEEEEECccc
Confidence 89999998764
No 32
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.41 E-value=6.2e-13 Score=114.03 Aligned_cols=82 Identities=26% Similarity=0.476 Sum_probs=74.0
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
..+|+|++.|. ...+|||++.++ .+++|..|.++|||+++ ||++||+|++|||+++.++++.+++..++..+.
T Consensus 3 ~~~~~v~l~k~--~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~ 80 (90)
T 1qav_A 3 LQRRRVTVRKA--DAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGK 80 (90)
T ss_dssp SSCEEEEEECC--TTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred CccEEEEEEeC--CCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 35899999997 567999999875 37999999999999998 999999999999999999999999999999888
Q ss_pred ceeEEEEcC
Q psy12108 592 CLSLKLVTP 600 (665)
Q Consensus 592 ~v~L~V~~~ 600 (665)
.++|+|.+.
T Consensus 81 ~v~l~v~r~ 89 (90)
T 1qav_A 81 EVVLEVKYM 89 (90)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEe
Confidence 999988753
No 33
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=112.98 Aligned_cols=82 Identities=27% Similarity=0.508 Sum_probs=73.6
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
+..+|+|+|.|+ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+
T Consensus 3 ~~~~r~v~l~k~---~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (93)
T 2dkr_A 3 SGSSGVVELPKT---DEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ 79 (93)
T ss_dssp SSCSCEEEEECC---TTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCCCEEEEEEeC---CCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356899999995 56999999864 489999999999999985 9999999999999999999999999999888
Q ss_pred CceeEEEEcC
Q psy12108 591 KCLSLKLVTP 600 (665)
Q Consensus 591 ~~v~L~V~~~ 600 (665)
..++|+|.+.
T Consensus 80 ~~v~l~v~r~ 89 (93)
T 2dkr_A 80 GSVKLVVRSG 89 (93)
T ss_dssp SEEEEEECCC
T ss_pred CcEEEEEEeC
Confidence 8899999764
No 34
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.41 E-value=1.1e-12 Score=113.33 Aligned_cols=81 Identities=21% Similarity=0.383 Sum_probs=73.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..|.|++.|+ ..+|||++.++ .+++|..|.+||||+++| |++||+|++|||.++.+++|++++.+|+..++.+
T Consensus 4 ~~r~v~l~k~---~~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v 80 (93)
T 3o46_A 4 SVKIIRLVKN---REPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAI 80 (93)
T ss_dssp CCEEEEEEES---SSCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEE
T ss_pred cEEEEEEEeC---CCCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4688999995 45999999976 589999999999999999 9999999999999999999999999999988899
Q ss_pred eEEEEcCC
Q psy12108 594 SLKLVTPM 601 (665)
Q Consensus 594 ~L~V~~~~ 601 (665)
+|+|.+..
T Consensus 81 ~l~v~~~~ 88 (93)
T 3o46_A 81 TFKIIPGS 88 (93)
T ss_dssp EEEEECC-
T ss_pred EEEEEeCC
Confidence 99998754
No 35
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.40 E-value=1.5e-12 Score=112.50 Aligned_cols=82 Identities=39% Similarity=0.590 Sum_probs=74.2
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeE
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSL 595 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L 595 (665)
...+|+|.+.|+ ..+|||.+.++.+++|..|.++|||+++||++||+|++|||+++.++++.+++..++ .|+.++|
T Consensus 6 ~~~~r~v~l~~~---~~~~G~~l~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l 81 (93)
T 2dls_A 6 SGVQRCVIIQKD---QHGFGFTVSGDRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVAL 81 (93)
T ss_dssp CCCEEEEEEECS---SSSCCEEEECSSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEE
T ss_pred CCCCEEEEEEeC---CCceeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEE
Confidence 346789999995 459999999988999999999999999999999999999999999999999999887 4889999
Q ss_pred EEEcCC
Q psy12108 596 KLVTPM 601 (665)
Q Consensus 596 ~V~~~~ 601 (665)
+|.+..
T Consensus 82 ~v~R~~ 87 (93)
T 2dls_A 82 TLLGSS 87 (93)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 999864
No 36
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.40 E-value=1.1e-12 Score=115.05 Aligned_cols=83 Identities=27% Similarity=0.565 Sum_probs=74.5
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
..+|.|+|.|+ ..+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.++
T Consensus 6 ~~~~~v~l~~~---~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 82 (101)
T 2jik_A 6 VTEEEINLTRG---PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLF 82 (101)
T ss_dssp EEEEEEEEECC---TTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CccEEEEEEeC---CCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45788999996 36999999974 489999999999999999 999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCCC
Q psy12108 587 KDAGKCLSLKLVTPMH 602 (665)
Q Consensus 587 k~~g~~v~L~V~~~~~ 602 (665)
+..|..+.|+|.+...
T Consensus 83 ~~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 83 RNAGYAVSLRVQHRLE 98 (101)
T ss_dssp HTCCSEEEEEEEEESC
T ss_pred HhCCCeEEEEEEeCCC
Confidence 9888899999987543
No 37
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=115.91 Aligned_cols=87 Identities=25% Similarity=0.523 Sum_probs=77.7
Q ss_pred cccccceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
..|..++.|.+.++ ..+|||.+.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..|
T Consensus 11 ~~~~~~~~v~l~~~---~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 87 (111)
T 2dlu_A 11 VCWGHVEEVELIND---GSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG 87 (111)
T ss_dssp CSCSEEEEEEEECC---SSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC
T ss_pred cCcCceEEEEEEeC---CCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35677899999985 56999999976 489999999999999999 9999999999999999999999999999888
Q ss_pred CceeEEEEcCCCC
Q psy12108 591 KCLSLKLVTPMHK 603 (665)
Q Consensus 591 ~~v~L~V~~~~~~ 603 (665)
..|.|+|.+....
T Consensus 88 ~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 88 NSVRMLVARDPAG 100 (111)
T ss_dssp SEEEEEEEESCTT
T ss_pred CeEEEEEEeCCCC
Confidence 9999999876543
No 38
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.40 E-value=2.5e-12 Score=113.42 Aligned_cols=83 Identities=24% Similarity=0.454 Sum_probs=74.7
Q ss_pred ccccceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
....+|+|.|.|+ ..++|||++.++. +++|..|.++|||+++||++||+|++|||+++.++++.+++++|+. +
T Consensus 12 ~~~~~~~v~l~k~--~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 12 TQFLPRIVTLKKP--PGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp CSSCCEEEEECCC--TTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCCCCEEEEEEeC--CCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 3456899999997 4579999999753 7999999999999999999999999999999999999999999998 8
Q ss_pred CceeEEEEcC
Q psy12108 591 KCLSLKLVTP 600 (665)
Q Consensus 591 ~~v~L~V~~~ 600 (665)
..+.|+|.+.
T Consensus 89 ~~v~l~v~r~ 98 (104)
T 1wi2_A 89 REISMRVRFF 98 (104)
T ss_dssp SSEEEEEECC
T ss_pred CEEEEEEEEC
Confidence 8999999865
No 39
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.39 E-value=1.2e-12 Score=116.56 Aligned_cols=83 Identities=31% Similarity=0.586 Sum_probs=74.1
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC----------------CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA----------------PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHE 580 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~----------------~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~ 580 (665)
..+|.|.+.+. ..++|||++.++. +++|..|.+||||+++||++||+|++|||+++.+++|.
T Consensus 6 ~~~~~v~l~~~--~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~ 83 (109)
T 1q3o_A 6 IKEKTVLLQKK--DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR 83 (109)
T ss_dssp EEEEEEEEECC--TTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH
T ss_pred cCcEEEEEEEC--CCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 35788999875 5679999999764 48999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCceeEEEEcCC
Q psy12108 581 EVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 581 evv~~ik~~g~~v~L~V~~~~ 601 (665)
+++.+++..+..+.|+|.+..
T Consensus 84 ~~~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 84 QVVNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHHHhCCCEEEEEEEECC
Confidence 999999988889999998754
No 40
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=1.9e-12 Score=114.80 Aligned_cols=82 Identities=20% Similarity=0.371 Sum_probs=74.1
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC------------CCeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD------------APVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVV 583 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~------------~~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv 583 (665)
..+++|++.|+ ..+|||+|.++ .+++|..|.++|||+++ ||++||+|++|||+++.++++.+++
T Consensus 7 ~~~~~v~l~k~---~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 7 GKSLTLVLHRD---SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SEEEEEEECCS---SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred cEEEEEEEEeC---CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35788999995 56999999873 38999999999999998 9999999999999999999999999
Q ss_pred HHHHhhCCceeEEEEcCC
Q psy12108 584 QLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 584 ~~ik~~g~~v~L~V~~~~ 601 (665)
.+++..++.+.|+|.+..
T Consensus 84 ~~~~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 84 EAFKTAKEPIVVQVLRRT 101 (107)
T ss_dssp HHHHHCCSSEEEEEEECC
T ss_pred HHHHcCCCcEEEEEEeCC
Confidence 999998899999998764
No 41
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.39 E-value=1.3e-12 Score=114.68 Aligned_cols=88 Identities=24% Similarity=0.496 Sum_probs=77.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..+|+|++.|+ ..+|||++.++ .+++|..|.++|||+++||++||+|++|||+++.++++.+++..++..|+.+
T Consensus 5 ~~~r~v~l~k~---~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (102)
T 2d90_A 5 SSGRVVVIKKG---SNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 81 (102)
T ss_dssp SSSEEEEEECC---SSSSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEE
T ss_pred CCCEEEEEeeC---CCCccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 46899999996 45999999965 4899999999999999999999999999999999999999999999888899
Q ss_pred eEEEEcCCCCCCcc
Q psy12108 594 SLKLVTPMHKNNNV 607 (665)
Q Consensus 594 ~L~V~~~~~~~~~~ 607 (665)
.|+|.+......+.
T Consensus 82 ~l~v~r~~~~~~~~ 95 (102)
T 2d90_A 82 TLLVLDKEAESIYS 95 (102)
T ss_dssp EEEECSTTCCCCCC
T ss_pred EEEEEECCCceEEE
Confidence 99998876554443
No 42
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.39 E-value=1.1e-12 Score=112.31 Aligned_cols=80 Identities=28% Similarity=0.474 Sum_probs=71.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC--
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG-- 590 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g-- 590 (665)
.+|+|.+.|++ .+|||++.++ .|++|..|.|+|||+++| |++||+|++|||+++.++++.+++.+|+..+
T Consensus 2 ~~~~v~l~~~~---~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 2 MEQDIFLWRKE---TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp EEEEEEEECBT---TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECC---CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 36789999963 5999999976 489999999999999999 9999999999999999999999999999874
Q ss_pred CceeEEEEcC
Q psy12108 591 KCLSLKLVTP 600 (665)
Q Consensus 591 ~~v~L~V~~~ 600 (665)
..++|+|.+.
T Consensus 79 ~~v~l~v~R~ 88 (90)
T 2q9v_A 79 GHVNLTVRQT 88 (90)
T ss_dssp TEEEEEEEEC
T ss_pred CeEEEEEEec
Confidence 3899998764
No 43
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.39 E-value=1.4e-12 Score=115.18 Aligned_cols=87 Identities=25% Similarity=0.413 Sum_probs=74.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..++|+|.|++ .+|||++.|+ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~v~l~k~~---~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (105)
T 2awx_A 3 KIMEIKLIKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALK 79 (105)
T ss_dssp CEEEEEEECBT---TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred eEEEEEEEECC---CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35678999964 5999999975 379999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCCCCCcc
Q psy12108 588 DAGKCLSLKLVTPMHKNNNV 607 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~~~~~~ 607 (665)
..|..+.|+|.+........
T Consensus 80 ~~~~~v~l~v~R~~~~~~~~ 99 (105)
T 2awx_A 80 NTSDFVYLKVAKPTSMYISR 99 (105)
T ss_dssp SCCSEEEEEEECCCC-----
T ss_pred cCCCeEEEEEEcCCCCCCcc
Confidence 88889999999876554433
No 44
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.39 E-value=9.5e-13 Score=117.15 Aligned_cols=83 Identities=16% Similarity=0.318 Sum_probs=73.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcC------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh-
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA- 589 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~- 589 (665)
.+++|+|.|. ...+|||++.++ .+++|..|.|||||+++| |++||+|++|||+++.+++|.+++.+|+..
T Consensus 5 ~~~~v~l~k~--~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 5 NIITVTLNME--KYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp CEEEEEECHH--HHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred eEEEEEEEeC--CCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 5788999985 457999999874 489999999999999999 999999999999999999999999999987
Q ss_pred --CCceeEEEEcCCC
Q psy12108 590 --GKCLSLKLVTPMH 602 (665)
Q Consensus 590 --g~~v~L~V~~~~~ 602 (665)
+..|+|+|.+...
T Consensus 83 ~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 83 HKPGPIVLTVAKSGG 97 (108)
T ss_dssp TSSSCEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCC
Confidence 4579999988654
No 45
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=115.63 Aligned_cols=81 Identities=19% Similarity=0.339 Sum_probs=72.7
Q ss_pred cceeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
.+|+|+|.|+ ..+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+.
T Consensus 15 ~~~~v~l~k~---~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 15 EVKIVELVKD---CKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp SCEEEEEEEC---SSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred ceEEEEEEEC---CCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 5689999996 35999999872 379999999999999999 99999999999999999999999999999
Q ss_pred h-CCceeEEEEcCC
Q psy12108 589 A-GKCLSLKLVTPM 601 (665)
Q Consensus 589 ~-g~~v~L~V~~~~ 601 (665)
. +..|+|+|.++.
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 6 568999998764
No 46
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.38 E-value=2.8e-12 Score=115.09 Aligned_cols=84 Identities=29% Similarity=0.528 Sum_probs=74.6
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-----------CeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-----------PVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQ 584 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-----------~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~ 584 (665)
..+|+|.+.|. ...+|||+|.++. +++|..|.++|||++ +||++||+|++|||+++.++++.+++.
T Consensus 9 ~~~~~v~l~~~--~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 9 LQTSDVVIHRK--ENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCEEEEEECC--TTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred ccceEEEEEEC--CCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45788999986 4579999998641 679999999999999 999999999999999999999999999
Q ss_pred HHHhhCCceeEEEEcCCC
Q psy12108 585 LIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 585 ~ik~~g~~v~L~V~~~~~ 602 (665)
+|+..+..+.|+|.+...
T Consensus 87 ~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 87 LIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp HHHHTTTEEEEEECCCSC
T ss_pred HHHcCCCeEEEEEEeCCc
Confidence 999988899999988654
No 47
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.38 E-value=1.6e-12 Score=113.61 Aligned_cols=82 Identities=21% Similarity=0.364 Sum_probs=73.0
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
.-+|.|.+.|. ..+++||++... .+++|..|.|||||+++| |++||+|++|||+++.++++++++++|+..++.+
T Consensus 11 ~~~~~v~l~K~--~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v 88 (97)
T 2ejy_A 11 HMVRLIQFEKV--TEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMI 88 (97)
T ss_dssp --CEEEEEEEC--SSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEE
T ss_pred CccEEEEEEeC--CCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 45789999997 568999999863 489999999999999999 9999999999999999989999999999888889
Q ss_pred eEEEEcC
Q psy12108 594 SLKLVTP 600 (665)
Q Consensus 594 ~L~V~~~ 600 (665)
+|+|.+.
T Consensus 89 ~L~V~~~ 95 (97)
T 2ejy_A 89 SLKVIPN 95 (97)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9999854
No 48
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.38 E-value=2.1e-12 Score=111.41 Aligned_cols=81 Identities=26% Similarity=0.473 Sum_probs=72.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..++|+|.|++ .+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 3 ~~~~v~l~k~~---~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 3 TIMEVNLLKGP---KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CEEEEEEECCT---TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEEEEEECC---CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35789999963 5999999964 279999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCC
Q psy12108 588 DAGKCLSLKLVTPM 601 (665)
Q Consensus 588 ~~g~~v~L~V~~~~ 601 (665)
..+..+.|+|.+.+
T Consensus 80 ~~~~~v~l~v~R~g 93 (94)
T 2fe5_A 80 NTSDMVYLKVAKPG 93 (94)
T ss_dssp TCCSEEEEEEECCC
T ss_pred cCCCeEEEEEEcCC
Confidence 88889999998753
No 49
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.37 E-value=1.8e-12 Score=116.10 Aligned_cols=91 Identities=29% Similarity=0.454 Sum_probs=73.1
Q ss_pred CcccccccccccccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCCh
Q psy12108 505 GPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPH 579 (665)
Q Consensus 505 gP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~ 579 (665)
+|++.+.... .++.|.+.|+ ..||||++.++ .+++|..|.+||||+++| |++||+|++|||++|.++++
T Consensus 14 d~~t~~~~~~---~~~~v~l~~~---~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 87 (112)
T 2r4h_A 14 GTENLYFQSM---DFYTVELERG---AKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKH 87 (112)
T ss_dssp ---------C---CEEEEEEECB---TTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCH
T ss_pred CCcccccCCC---ceEEEEEEcC---CCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4666666553 3678999986 35899999876 389999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhhCCceeEEEEcCC
Q psy12108 580 EEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 580 ~evv~~ik~~g~~v~L~V~~~~ 601 (665)
.+++.+++..|..|+|+|.+..
T Consensus 88 ~~~~~~l~~~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 88 SRAIELIKNGGRRVRLFLKRGE 109 (112)
T ss_dssp HHHHHHHHTTTTEEEEEEECCE
T ss_pred HHHHHHHHcCCCeEEEEEEeCC
Confidence 9999999988889999998754
No 50
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.37 E-value=3.3e-12 Score=110.71 Aligned_cols=82 Identities=22% Similarity=0.394 Sum_probs=73.7
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
..+++|.|.|+ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 4 g~~~~v~l~k~---~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 4 GDIFEVELAKN---DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp TCEEEEEEECS---SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred CCEEEEEEEeC---CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45788999995 46999999974 389999999999999999 99999999999999999999999999998
Q ss_pred hCCceeEEEEcCC
Q psy12108 589 AGKCLSLKLVTPM 601 (665)
Q Consensus 589 ~g~~v~L~V~~~~ 601 (665)
.|..+.|+|.+..
T Consensus 81 ~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 81 TGQVVHLLLEKGQ 93 (96)
T ss_dssp CCSEEEEEEECCS
T ss_pred CCCeEEEEEEcCC
Confidence 8889999998653
No 51
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.37 E-value=1.5e-12 Score=119.54 Aligned_cols=88 Identities=16% Similarity=0.288 Sum_probs=77.0
Q ss_pred cccccceeEEeccCCCCCcceeEEEEcC-------------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCCh
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRGD-------------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPH 579 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-------------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~ 579 (665)
..+..+|.|++.|++ ..++|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++
T Consensus 25 ~~~~~~r~v~l~k~~-~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 103 (128)
T 1nf3_C 25 ILPETHRRVRLCKYG-TEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL 103 (128)
T ss_dssp TSCTTCEEEEECCSS-TTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH
T ss_pred cCCCccEEEEEEECC-CCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 345578999999973 257999999864 269999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhhCCceeEEEEcCCC
Q psy12108 580 EEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 580 ~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
.+++.+|+..+..|+|+|.+...
T Consensus 104 ~~~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 104 DQVTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHHHcCCCeEEEEEEECCc
Confidence 99999999888899999987653
No 52
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2.8e-12 Score=116.12 Aligned_cols=86 Identities=27% Similarity=0.557 Sum_probs=77.0
Q ss_pred cccccceeEEeccCCCCCcceeEEEEc---------CCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHH
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRG---------DAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVV 583 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g---------~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv 583 (665)
..+..++.|+|.|+ ..+|||++.+ ..+++|..|.++|||+++| |++||+|++|||++|.++++.+++
T Consensus 13 ~~~~~~~~v~l~r~---~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 89 (120)
T 2eno_A 13 DYLVTEEEINLTRG---PSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAV 89 (120)
T ss_dssp CEEEEEEEEEEECC---SSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHH
T ss_pred CCCCceEEEEEEEC---CCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 44567889999996 3699999997 3489999999999999999 999999999999999999999999
Q ss_pred HHHHhhCCceeEEEEcCCC
Q psy12108 584 QLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 584 ~~ik~~g~~v~L~V~~~~~ 602 (665)
.+++..+..|.|+|.+...
T Consensus 90 ~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 90 DLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHCSEEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEEeCCc
Confidence 9999888899999987643
No 53
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=3e-12 Score=112.76 Aligned_cols=83 Identities=28% Similarity=0.477 Sum_probs=74.4
Q ss_pred ccceeEEeccCCCCCcceeEEEEc------CCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRG------DAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g------~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
..++.|.+.++ ..+|||++.+ ..+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 10 ~~~~~v~l~~~---~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (104)
T 2djt_A 10 SGHFSVELVRG---YAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG 86 (104)
T ss_dssp CCCEEEEEECC---SSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT
T ss_pred CceEEEEEEeC---CCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45678999985 4699999998 4589999999999999999 999999999999999999999999999988
Q ss_pred CCceeEEEEcCCC
Q psy12108 590 GKCLSLKLVTPMH 602 (665)
Q Consensus 590 g~~v~L~V~~~~~ 602 (665)
|..+.|+|.+...
T Consensus 87 g~~v~l~v~R~g~ 99 (104)
T 2djt_A 87 GPQLHLVIRRPLS 99 (104)
T ss_dssp CSEEEEEECCCCC
T ss_pred CCeEEEEEEECCC
Confidence 8899999987643
No 54
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.37 E-value=2.1e-12 Score=117.78 Aligned_cols=82 Identities=22% Similarity=0.363 Sum_probs=74.5
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
.+|+|++.|+ ..++|||++.|+. +++|..|.+||||+++| |++||+|++|||.++.+++|.+++.++++.++.
T Consensus 19 ~~~~v~l~k~--~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 96 (125)
T 3hpk_A 19 VPGKVTLQKD--AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 96 (125)
T ss_dssp EEEEEEEECC--TTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CCeEEEEEeC--CCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5788999997 5689999999764 68999999999999999 999999999999999999999999999998888
Q ss_pred eeEEEEcCC
Q psy12108 593 LSLKLVTPM 601 (665)
Q Consensus 593 v~L~V~~~~ 601 (665)
|+|+|.+..
T Consensus 97 v~l~v~r~~ 105 (125)
T 3hpk_A 97 VTIHYNKLQ 105 (125)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEECC
Confidence 999998743
No 55
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.36 E-value=2e-12 Score=114.25 Aligned_cols=84 Identities=25% Similarity=0.455 Sum_probs=75.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
.||.|++.+. ...+|||.+.++. +++|..|.|||||+++||++||+|++|||+++.+++|.+++.+++..|..++
T Consensus 1 g~r~v~l~~~--~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 78 (106)
T 3ngh_A 1 GPRESKLSKQ--EGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 78 (106)
T ss_dssp CCEEEEEECC--TTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEE
T ss_pred CCEEEEEEeC--CCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEE
Confidence 4789999997 4578999888653 7999999999999999999999999999999999999999999998899999
Q ss_pred EEEEcCCCC
Q psy12108 595 LKLVTPMHK 603 (665)
Q Consensus 595 L~V~~~~~~ 603 (665)
|+|.+....
T Consensus 79 l~v~r~~~~ 87 (106)
T 3ngh_A 79 LLVLDGDSY 87 (106)
T ss_dssp EEEECHHHH
T ss_pred EEEEECCee
Confidence 999976543
No 56
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.36 E-value=2.7e-12 Score=116.00 Aligned_cols=93 Identities=23% Similarity=0.461 Sum_probs=79.7
Q ss_pred cccccccccccccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHH
Q psy12108 506 PVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEE 581 (665)
Q Consensus 506 P~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~e 581 (665)
|...+.....+..+|+|.+.|+ ..||||++.++. +++|..|.+||||+++| |++||+|++|||+++.++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~v~l~k~---~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 78 (119)
T 1tp5_A 2 SPEFLGEEDIPREPRRIVIHRG---STGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ 78 (119)
T ss_dssp ---CGGGSCCCCSCEEEEEECT---TSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH
T ss_pred chhhcCCCCCCCccEEEEEEEC---CCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 3344555666678999999996 358999999774 89999999999999999 9999999999999999999999
Q ss_pred HHHHHHhhCCceeEEEEcCC
Q psy12108 582 VVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 582 vv~~ik~~g~~v~L~V~~~~ 601 (665)
++..++..+..+.|+|.+..
T Consensus 79 ~~~~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 79 AAIALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp HHHHHHTSCSEEEEEEEECH
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 99999988899999998653
No 57
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.36 E-value=1.1e-12 Score=120.09 Aligned_cols=84 Identities=26% Similarity=0.379 Sum_probs=75.6
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCC-------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecC-CCChHHHHHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDA-------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVK-WSPHEEVVQLI 586 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~-------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~-~~~~~evv~~i 586 (665)
+..++.|.+.|+ ...+|||++.++. +++|..|.+||||+++| |++||+|++|||+++. ++++.+++.+|
T Consensus 23 ~~~~~~v~l~k~--~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 23 GRQIEYIDIERP--STGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALL 100 (128)
T ss_dssp TCEEEEEEEECC--SSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHH
T ss_pred cCceEEEEEEEC--CCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 567889999997 4579999997642 79999999999999999 9999999999999997 99999999999
Q ss_pred HhhCCceeEEEEcCC
Q psy12108 587 KDAGKCLSLKLVTPM 601 (665)
Q Consensus 587 k~~g~~v~L~V~~~~ 601 (665)
+..+..|.|+|.+..
T Consensus 101 ~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 101 QQTTGSLRLIVAREP 115 (128)
T ss_dssp HHCCSEEEEEEEECC
T ss_pred HcCCCeEEEEEEcCC
Confidence 998899999998763
No 58
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.36 E-value=3.7e-12 Score=109.52 Aligned_cols=82 Identities=27% Similarity=0.435 Sum_probs=73.7
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..++|++.|+ ...+|||++.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.++..+++..++.+
T Consensus 4 ~~~~v~l~k~--~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 81 (92)
T 2qg1_A 4 DTLTIGLQKK--PGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTV 81 (92)
T ss_dssp CEEEEEEECC--TTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEE
T ss_pred eEEEEEEEeC--CCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3567889986 457999999875 389999999999999999 9999999999999999999999999999888899
Q ss_pred eEEEEcCC
Q psy12108 594 SLKLVTPM 601 (665)
Q Consensus 594 ~L~V~~~~ 601 (665)
.|+|.+..
T Consensus 82 ~l~v~R~~ 89 (92)
T 2qg1_A 82 TLEVGRIS 89 (92)
T ss_dssp EEEEECCC
T ss_pred EEEEEccc
Confidence 99998865
No 59
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=2.7e-12 Score=116.03 Aligned_cols=83 Identities=31% Similarity=0.483 Sum_probs=74.3
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhc--CCCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFG--GMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~a--GLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
..+|+|++.|+ ..++|||++.++. |++|..|.+||||+++ ||++||+|++|||+++.+++|.+++.+++..+
T Consensus 14 ~~~~~v~l~k~--~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 14 DNLVLIRMKPD--ENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp SCCEEEEECCC--SSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCeEEEEEEeC--CCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 35688999997 5678999999864 7999999999999998 99999999999999999999999999999885
Q ss_pred ----CceeEEEEcCC
Q psy12108 591 ----KCLSLKLVTPM 601 (665)
Q Consensus 591 ----~~v~L~V~~~~ 601 (665)
..|.|+|.+..
T Consensus 92 ~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 92 ERHSGELMLLVRPNA 106 (119)
T ss_dssp HCCSSCEEEEEECCC
T ss_pred ccCCCEEEEEEEccc
Confidence 48999998764
No 60
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.36 E-value=3.3e-12 Score=112.29 Aligned_cols=82 Identities=26% Similarity=0.526 Sum_probs=74.5
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
...+|.|++.|+ ..+|||++.++. +++|..|.|||||+++| |++||+|++|||.++.++++.+++..++..+.
T Consensus 9 ~~~~~~v~l~k~---~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 85 (104)
T 3i4w_A 9 PREPRRIVIHRG---STGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQ 85 (104)
T ss_dssp CSSCEEEEEECB---TTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCccEEEEEEeC---CCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 346889999996 459999998765 89999999999999999 99999999999999999999999999999888
Q ss_pred ceeEEEEcC
Q psy12108 592 CLSLKLVTP 600 (665)
Q Consensus 592 ~v~L~V~~~ 600 (665)
.++|+|.+.
T Consensus 86 ~v~l~v~r~ 94 (104)
T 3i4w_A 86 TVTIIAQYK 94 (104)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999865
No 61
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.35 E-value=2.1e-12 Score=112.39 Aligned_cols=82 Identities=24% Similarity=0.400 Sum_probs=72.9
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
.+++|++.|. ...+|||++.++. +++|..|.++|||+++| |++||+|++|||+++.++++.++..++
T Consensus 5 ~~~~v~l~k~--~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 5 LIHMVTLDKT--GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp EEEEEEEECT--TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEeC--CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3678999995 4579999998642 78999999999999999 999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCC
Q psy12108 587 KDAGKCLSLKLVTPM 601 (665)
Q Consensus 587 k~~g~~v~L~V~~~~ 601 (665)
+..|..++|+|.+.+
T Consensus 83 ~~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 83 KEADFKIELEIQTFD 97 (98)
T ss_dssp HHSCSEEEEEEEEC-
T ss_pred hcCCCeEEEEEEeCC
Confidence 998889999998753
No 62
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.35 E-value=4.2e-12 Score=110.53 Aligned_cols=83 Identities=22% Similarity=0.420 Sum_probs=74.1
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
..+++|.+.++ ..+|||++.++. +++|..|.++|||+++| |++||+|++|||+++.++++.+++..++..+
T Consensus 3 g~~~~v~l~~~---~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 3 GCETTIEISKG---RTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp CEEEEEEEECB---TTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CCEEEEEEEEC---CCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35678999995 459999999764 89999999999999999 9999999999999999999999999999888
Q ss_pred CceeEEEEcCCC
Q psy12108 591 KCLSLKLVTPMH 602 (665)
Q Consensus 591 ~~v~L~V~~~~~ 602 (665)
..+.|+|.+...
T Consensus 80 ~~v~l~v~R~~~ 91 (98)
T 2opg_A 80 QRVRLTLYRDEA 91 (98)
T ss_dssp SEEEEEEEECSS
T ss_pred CeEEEEEEcCCC
Confidence 899999987643
No 63
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=2.5e-12 Score=113.25 Aligned_cols=81 Identities=25% Similarity=0.450 Sum_probs=72.7
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh--C
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--G 590 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g 590 (665)
..+.|++.|+ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||++|.++++.+++++|+.. +
T Consensus 9 ~~~~v~l~~~---~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g 85 (103)
T 1uep_A 9 KELDVHLRRM---ESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARN 85 (103)
T ss_dssp EEECCEEESS---SSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeC---CCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 4577889984 56999999983 479999999999999999 999999999999999999999999999987 7
Q ss_pred CceeEEEEcCC
Q psy12108 591 KCLSLKLVTPM 601 (665)
Q Consensus 591 ~~v~L~V~~~~ 601 (665)
..|+|+|.+..
T Consensus 86 ~~v~l~v~R~~ 96 (103)
T 1uep_A 86 GQVNLTVRRKV 96 (103)
T ss_dssp TEEEEEEEEEC
T ss_pred CcEEEEEEeCC
Confidence 89999998764
No 64
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.35 E-value=3.3e-12 Score=111.21 Aligned_cols=80 Identities=26% Similarity=0.433 Sum_probs=70.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC-ce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK-CL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~-~v 593 (665)
.+|.+.+.++ ..||||++.++. +++|..|.++|||+++||++||+|++|||+++.++++.++..+|+..+. .+
T Consensus 9 ~~~~~~l~~~---~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 85 (98)
T 2jxo_A 9 RPRLCTMKKG---PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETK 85 (98)
T ss_dssp CCEEEEEECT---TTCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEE
T ss_pred CcEEEEEEeC---CCcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEE
Confidence 4688999995 459999999876 8999999999999999999999999999999999999999999998744 56
Q ss_pred eEEEEcC
Q psy12108 594 SLKLVTP 600 (665)
Q Consensus 594 ~L~V~~~ 600 (665)
.|+|.+.
T Consensus 86 ~l~v~R~ 92 (98)
T 2jxo_A 86 LLVVDRE 92 (98)
T ss_dssp EEECCHH
T ss_pred EEEEECC
Confidence 6777653
No 65
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.35 E-value=6.3e-12 Score=109.31 Aligned_cols=81 Identities=30% Similarity=0.536 Sum_probs=71.8
Q ss_pred ceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
.++|++.+. .++|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..|..+
T Consensus 6 ~~~v~l~~~---~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v 82 (97)
T 1n7e_A 6 IYTVELKRY---GGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETV 82 (97)
T ss_dssp EEEEEEECT---TSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEEEeC---CCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 456888774 45799999976 489999999999999999 9999999999999999999999999999778899
Q ss_pred eEEEEcCCC
Q psy12108 594 SLKLVTPMH 602 (665)
Q Consensus 594 ~L~V~~~~~ 602 (665)
.|+|.+...
T Consensus 83 ~l~v~R~~~ 91 (97)
T 1n7e_A 83 TLKIKKQTD 91 (97)
T ss_dssp EEEEECCCC
T ss_pred EEEEEeCCC
Confidence 999987653
No 66
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.35 E-value=4.2e-12 Score=111.38 Aligned_cols=81 Identities=25% Similarity=0.461 Sum_probs=73.0
Q ss_pred ceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
.+.|++.|+ ..+|||++.++ .+++|..|.+||||+++| |++||+|++|||.++.++++.+++..++.
T Consensus 5 ~~~v~l~k~---~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 5 YEEIVLERG---NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEECB---TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEC---CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 577899985 45999999974 489999999999999999 99999999999999999999999999999
Q ss_pred hCCceeEEEEcCCC
Q psy12108 589 AGKCLSLKLVTPMH 602 (665)
Q Consensus 589 ~g~~v~L~V~~~~~ 602 (665)
.|..+.|+|.+...
T Consensus 82 ~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 82 AGPVVRLVVRRRQP 95 (102)
T ss_dssp SCSEEEEEEEEECC
T ss_pred CCCeEEEEEEeCCC
Confidence 88999999987653
No 67
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.35 E-value=4.7e-12 Score=114.43 Aligned_cols=86 Identities=20% Similarity=0.388 Sum_probs=72.6
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
...+.+.+.+. ...+|||++.++. +++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++..+
T Consensus 14 ~~~~~v~l~~~--~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 14 DGIHVTILHKE--EGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp TTEEEEEEECC--TTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEeC--CCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34567788886 5689999999763 79999999999999999 9999999999999999999999999999886
Q ss_pred Cc-eeEEEEcCCCCC
Q psy12108 591 KC-LSLKLVTPMHKN 604 (665)
Q Consensus 591 ~~-v~L~V~~~~~~~ 604 (665)
.. +.++|.+.....
T Consensus 92 ~~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 92 EPRQAVIVTRKLTPE 106 (119)
T ss_dssp SSSEEEEEEECCCSS
T ss_pred CCeEEEEEEcCCCcc
Confidence 64 557777665433
No 68
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=3.9e-12 Score=109.62 Aligned_cols=82 Identities=18% Similarity=0.385 Sum_probs=72.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
..+|+|.|.|. ...+|||++.+. .+++|..|.++|||+++| |++||+|++|||+++ +.+++++.++|+..++.++
T Consensus 5 ~~~r~v~l~k~--~~~~lG~~i~~~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 5 SSGRMVGIRKT--AGEHLGVTFRVEGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CCSCBCCBCCC--TTCCCCEEEEESSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBC
T ss_pred CCcEEEEEEEC--CCCcEeEEEEecCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEE
Confidence 35788999886 467999999876 489999999999999965 999999999999999 8899999999998888999
Q ss_pred EEEEcCC
Q psy12108 595 LKLVTPM 601 (665)
Q Consensus 595 L~V~~~~ 601 (665)
|+|.+..
T Consensus 82 l~v~~~~ 88 (91)
T 2e7k_A 82 LKILSGP 88 (91)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9998653
No 69
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=5.6e-12 Score=114.57 Aligned_cols=85 Identities=26% Similarity=0.419 Sum_probs=75.6
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..+++|.+.|+ ...+|||++.++ .+++|..|.+++||+++| |++||+|++|||+++.++++.+++++|+
T Consensus 14 ~~~~~v~l~k~--~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 14 TETTEVVLTAD--PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp EEEEEEEECCC--SSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred ceeEEEEEEeC--CCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35688999997 568999999965 378999999999999999 9999999999999999999999999999
Q ss_pred hh--CCceeEEEEcCCCC
Q psy12108 588 DA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 588 ~~--g~~v~L~V~~~~~~ 603 (665)
.. +..++|+|.+....
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 92 DSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHTTTTCEEEEEEEECCC
T ss_pred hCCCCCeEEEEEEECCcc
Confidence 87 67999999987543
No 70
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=3e-12 Score=115.52 Aligned_cols=84 Identities=17% Similarity=0.268 Sum_probs=73.6
Q ss_pred cceeEEeccCCCC----CcceeEEEEcCC---------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHH
Q psy12108 518 APRSIQLQRANNS----DTGFGFSVRGDA---------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVV 583 (665)
Q Consensus 518 ~~r~v~l~rg~~~----~~g~Gf~l~g~~---------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv 583 (665)
..+.|.+.|++.+ ..+|||+|.++. +++|..|.++|||+++| |++||+|++|||+++.+++|.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 4577889987410 369999998653 68999999999999999 999999999999999999999999
Q ss_pred HHHHhhCCceeEEEEcCC
Q psy12108 584 QLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 584 ~~ik~~g~~v~L~V~~~~ 601 (665)
.+|+..+..|+|+|.+..
T Consensus 92 ~~l~~~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDL 109 (117)
T ss_dssp HHHSCCSSCEEEEEESSC
T ss_pred HHHhcCCCEEEEEEEECC
Confidence 999998889999998754
No 71
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=4.9e-12 Score=112.78 Aligned_cols=82 Identities=24% Similarity=0.334 Sum_probs=71.9
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
...|.|++.|+ .||||++.|+ .+++|..|.++|||+++| |++||+|++|||+++.+++|++++++|++.
T Consensus 14 ~~~~~v~l~k~----~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 14 PAFRVITVTKE----TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp TTEEEEEECCS----SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CcEEEEEEeCC----CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 45688989884 4899999974 269999999999999999 999999999999999999999999999987
Q ss_pred C----CceeEEEEcCCC
Q psy12108 590 G----KCLSLKLVTPMH 602 (665)
Q Consensus 590 g----~~v~L~V~~~~~ 602 (665)
+ ..++|.|.+...
T Consensus 90 ~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 90 KLRSESPWEIAFIRSGP 106 (109)
T ss_dssp CCSSSSCEEEEEECCCC
T ss_pred ccCCCceEEEEEEeCCC
Confidence 5 578899887653
No 72
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=1.4e-12 Score=116.48 Aligned_cols=83 Identities=23% Similarity=0.410 Sum_probs=74.7
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-------------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-------------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEV 582 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-------------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~ev 582 (665)
...|+|.|.|+ ...+|||++.++. +++|..|.++|||+++| |++||+|++|||+++.++++.++
T Consensus 8 ~~~~~v~l~k~--~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 85 (111)
T 1uju_A 8 PGLRELCIQKA--PGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEA 85 (111)
T ss_dssp CSSSCEEEECC--TTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHH
T ss_pred CccEEEEEEEC--CCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 45688999997 4579999999764 68999999999999999 99999999999999999999999
Q ss_pred HHHHHhhCCceeEEEEcCC
Q psy12108 583 VQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 583 v~~ik~~g~~v~L~V~~~~ 601 (665)
+.+++..+..+.|+|.+..
T Consensus 86 ~~~l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 86 VQLLRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HHHHSSCSSEEEECCCCCC
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999998889999987653
No 73
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=2.6e-12 Score=116.25 Aligned_cols=94 Identities=22% Similarity=0.329 Sum_probs=78.2
Q ss_pred cCccccccccccc-ccceeEEeccCCCCCcceeEEEEcCC-----CeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCC
Q psy12108 504 LGPVAIFSAKHHW-TAPRSIQLQRANNSDTGFGFSVRGDA-----PVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKW 576 (665)
Q Consensus 504 LgP~svf~~~~~~-~~~r~v~l~rg~~~~~g~Gf~l~g~~-----~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~ 576 (665)
.+|++.|...... ...|.+.+.+. .||||++.|+. +++|..|.+||||+++ ||++||+|++|||+++.+
T Consensus 3 ~dP~s~~~~~~~~~~~~~~~~~~~~----~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~ 78 (118)
T 1v6b_A 3 EGAATMFSPEQIAGKDVRLLRIKKE----GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTD 78 (118)
T ss_dssp CCCCSSSCHHHHSSCCEEEEEEESC----SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTT
T ss_pred CCCcceecccccCCceEEEEEECCC----CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 5688888655432 35677777763 48999998752 5999999999999998 999999999999999999
Q ss_pred CChHHHHHHHHhh----CCceeEEEEcCC
Q psy12108 577 SPHEEVVQLIKDA----GKCLSLKLVTPM 601 (665)
Q Consensus 577 ~~~~evv~~ik~~----g~~v~L~V~~~~ 601 (665)
++|++++++|+.. |..|+|+|.+..
T Consensus 79 ~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 79 YTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred CCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 9999999999875 779999999753
No 74
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=1.1e-11 Score=112.79 Aligned_cols=83 Identities=31% Similarity=0.424 Sum_probs=73.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh--hC
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AG 590 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g 590 (665)
..++|++.|+ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++++|+. .|
T Consensus 19 ~~~~v~l~~~---~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 95 (123)
T 1ueq_A 19 TFLSTTLKKS---NMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIG 95 (123)
T ss_dssp EEEEEEEECC---TTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEeC---CCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 4567888885 55999999974 369999999999999999 99999999999999999999999999998 47
Q ss_pred CceeEEEEcCCCC
Q psy12108 591 KCLSLKLVTPMHK 603 (665)
Q Consensus 591 ~~v~L~V~~~~~~ 603 (665)
..|.|+|.+....
T Consensus 96 ~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 96 QSVNLVLCRGYPL 108 (123)
T ss_dssp CEEEEEEEESCCC
T ss_pred CeEEEEEEeCCCC
Confidence 8999999986543
No 75
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.33 E-value=1.8e-12 Score=119.29 Aligned_cols=82 Identities=18% Similarity=0.355 Sum_probs=72.5
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
...+.|++.|+ ..||||+|.|+ .|++|..|.+||||+++ ||++||+|++|||+++.+++|++++++|+.
T Consensus 28 ~~~~~v~l~k~---~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 28 ATVCTVTLEKM---SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp EEEEEEEEETT---SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CcEEEEEEEcC---CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 45678999985 45999999974 37999999999999997 999999999999999999999999999999
Q ss_pred hCC-ceeEEEEcCC
Q psy12108 589 AGK-CLSLKLVTPM 601 (665)
Q Consensus 589 ~g~-~v~L~V~~~~ 601 (665)
.+. .|.|+|.+..
T Consensus 105 ~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 105 LPDGPVTIVIRRKS 118 (130)
T ss_dssp SCSSEEEEEEEEES
T ss_pred CCCceEEEEEEeCC
Confidence 855 6999998763
No 76
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.33 E-value=5.2e-12 Score=107.68 Aligned_cols=79 Identities=23% Similarity=0.379 Sum_probs=69.2
Q ss_pred ceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
..+|++ ++ ..+|||++.++ .+++|..|.|+|||+++||++||+|++|||.++.++++.++..+++..+..+.
T Consensus 4 ~~~v~l-~~---~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 79 (88)
T 2uzc_A 4 NYSVSL-VG---PAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLN 79 (88)
T ss_dssp EEEEEE-ES---SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred EEEEEE-cC---CCcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 345777 44 35899999874 37899999999999999999999999999999999999999999998888999
Q ss_pred EEEEcCC
Q psy12108 595 LKLVTPM 601 (665)
Q Consensus 595 L~V~~~~ 601 (665)
|+|.+..
T Consensus 80 l~v~R~g 86 (88)
T 2uzc_A 80 MTLQRES 86 (88)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998754
No 77
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.33 E-value=1.6e-12 Score=117.02 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=76.2
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecC-CCChHHHHHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVK-WSPHEEVVQLI 586 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~-~~~~~evv~~i 586 (665)
+..+++|++.|+ ...+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++. ++++.+++.++
T Consensus 18 ~~~~~~v~l~k~--~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 18 GRHVEVFELLKP--PSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISIL 95 (117)
T ss_dssp TSCEEEEEEECC--SSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHH
T ss_pred CCeEEEEEEEEC--CCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 356889999997 467999999864 379999999999999999 9999999999999998 99999999999
Q ss_pred HhhCCceeEEEEcCCC
Q psy12108 587 KDAGKCLSLKLVTPMH 602 (665)
Q Consensus 587 k~~g~~v~L~V~~~~~ 602 (665)
+..|..|.|+|.+...
T Consensus 96 ~~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 96 QKAKDTVQLVIARGSL 111 (117)
T ss_dssp HHCCSEEEEEEESSCC
T ss_pred HcCCCEEEEEEEeCCc
Confidence 9988999999998654
No 78
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.33 E-value=6.7e-12 Score=108.65 Aligned_cols=83 Identities=23% Similarity=0.409 Sum_probs=73.1
Q ss_pred ceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
..+|.|.|.. ...+|||++.+. .+++|..|.|+|||+++| |++||+|++|||.++.++++.+++..++..|..+.
T Consensus 4 ~~~v~l~k~~-~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 82 (95)
T 2vwr_A 4 ILQVALHKRD-SGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN 82 (95)
T ss_dssp EEEEEEECSS-TTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred EEEEEEEECC-CCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4568899863 256899999865 389999999999999999 99999999999999999999999999998899999
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
|+|.+...
T Consensus 83 l~v~R~~~ 90 (95)
T 2vwr_A 83 LTIARPGK 90 (95)
T ss_dssp EEEEEESC
T ss_pred EEEEcCCc
Confidence 99987654
No 79
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.33 E-value=6.6e-12 Score=106.33 Aligned_cols=76 Identities=30% Similarity=0.526 Sum_probs=67.1
Q ss_pred eEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh--CCce
Q psy12108 521 SIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCL 593 (665)
Q Consensus 521 ~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v 593 (665)
+|++.|+ ..||||++.++. +++|..|.|||||+++| |++||+|++|||+++.++++.++.++|+.. |..+
T Consensus 3 ~v~l~k~---~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 79 (85)
T 2i04_A 3 HTKLRKS---SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 79 (85)
T ss_dssp EEEEECB---TTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEEC---CCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 4778885 459999998742 59999999999999999 999999999999999999999999999986 7788
Q ss_pred eEEEEc
Q psy12108 594 SLKLVT 599 (665)
Q Consensus 594 ~L~V~~ 599 (665)
.|+|.+
T Consensus 80 ~l~v~R 85 (85)
T 2i04_A 80 DLELCR 85 (85)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 888853
No 80
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.33 E-value=8.1e-12 Score=113.88 Aligned_cols=87 Identities=26% Similarity=0.423 Sum_probs=74.9
Q ss_pred cccccceeEEeccCCCCCcceeEEEEcC-------------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCCh
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRGD-------------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPH 579 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-------------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~ 579 (665)
..|..|++|.+.++ ..++|||++.+. .+++|..|.|||||+++| |++||+|++|||+++.++++
T Consensus 20 s~~~~p~~v~l~k~--~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 97 (123)
T 2iwq_A 20 FQSMQPRRVELWRE--PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH 97 (123)
T ss_dssp ---CCCEEEEECCC--TTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred cccCCCEEEEEEec--CCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 34566899999987 457899998753 369999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhhCCceeEEEEcCCC
Q psy12108 580 EEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 580 ~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
.+++.+|+..++.++|+|.+...
T Consensus 98 ~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 98 EQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHHHHHHCCSSEEEEEECCCC
T ss_pred HHHHHHHHcCCCeEEEEEEECCc
Confidence 99999999988899999987543
No 81
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=3.5e-12 Score=114.60 Aligned_cols=94 Identities=20% Similarity=0.352 Sum_probs=80.0
Q ss_pred hcCcccccccccccccceeEEeccCCCCCcceeEEEEcCC-----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCC
Q psy12108 503 QLGPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGDA-----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKW 576 (665)
Q Consensus 503 ~LgP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~-----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~ 576 (665)
.++|++.+..... .+.|.+.++ ..+|||++.++. +++|..|.+||||+++| |++||+|++|||+++.+
T Consensus 5 ~~Dp~s~~~~~~~---~~~v~l~~~---~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~ 78 (116)
T 2dm8_A 5 SSGPATCPIVPGQ---EMIIEISKG---RSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRN 78 (116)
T ss_dssp CCCSSSCCCCTTS---CEEEEEECC---SSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSS
T ss_pred CCCcccCccCCCC---EEEEEEEEC---CCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC
Confidence 3567776655433 577889884 569999998753 89999999999999999 99999999999999999
Q ss_pred CChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 577 SPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 577 ~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
+++.+++.+++..+..|.|+|.+...
T Consensus 79 ~~~~~~~~~l~~~~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 79 SSHEEAITALRQTPQKVRLVVYRDEA 104 (116)
T ss_dssp SCHHHHHHHHHTCCSEEEEEEECCSS
T ss_pred CCHHHHHHHHHhCCCeEEEEEEeCCc
Confidence 99999999999888899999987654
No 82
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=6.4e-13 Score=121.55 Aligned_cols=85 Identities=26% Similarity=0.454 Sum_probs=75.4
Q ss_pred ccccceeEEeccCCCCCcceeEEEEc--------------------------------CCCeEEEEeCCCChhhhcCCCC
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRG--------------------------------DAPVIVASVDSGSLAQFGGMKD 562 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g--------------------------------~~~v~V~~V~pgspA~~aGLk~ 562 (665)
.+..||+|+|.|++ .||||+|.+ ..+++|..|.++|||+++||++
T Consensus 5 ~~~~~r~v~l~r~~---~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~ 81 (126)
T 2yuy_A 5 SSGGPKTVTLKRTS---QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCT 81 (126)
T ss_dssp CSSSCCCEEEECCS---SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCS
T ss_pred CCCCCEEEEEEECC---CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCC
Confidence 35678999999963 489999975 1358999999999999999999
Q ss_pred CCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 563 GDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 563 GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
||+|++|||++|.++++.+++.+|+..|..|+|+|.+...
T Consensus 82 GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 82 GDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp SCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999999999999988899999987643
No 83
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.33 E-value=7.2e-12 Score=113.77 Aligned_cols=96 Identities=26% Similarity=0.385 Sum_probs=77.5
Q ss_pred hhcCcccccccccccccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEe
Q psy12108 502 KQLGPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRD 573 (665)
Q Consensus 502 ~~LgP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~ 573 (665)
..++|++.|..+..|.. ..|.+.++ ..+|||++.+. .+++|..|.|||||+++| |++||+|++|||++
T Consensus 15 ~~~D~~~~y~~~~~~~~-~~v~l~~~---~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~ 90 (121)
T 2kom_A 15 ENLYFQGSYNTKKIGKR-LNIQLKKG---TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVD 90 (121)
T ss_dssp ------CCCCCCCSCEE-EEEEEECC---TTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEE
T ss_pred cccCccccccCccCCeE-EEEEEEcC---CCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEE
Confidence 34568888888777643 55677774 56999999865 479999999999999999 99999999999999
Q ss_pred cCCCChHHHHHHHHhh--CCceeEEEEcCC
Q psy12108 574 VKWSPHEEVVQLIKDA--GKCLSLKLVTPM 601 (665)
Q Consensus 574 v~~~~~~evv~~ik~~--g~~v~L~V~~~~ 601 (665)
+.++++.+++++|+.. |..|.|+|.+.+
T Consensus 91 v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 91 LVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred cCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 9999999999999985 778999998753
No 84
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.1e-11 Score=108.78 Aligned_cols=83 Identities=28% Similarity=0.454 Sum_probs=72.3
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-------------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-------------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVV 583 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-------------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv 583 (665)
.|++|.+.+. ...+|||++.+. .+++|..|.+||||+++| |++||+|++|||+++.++++.++.
T Consensus 4 dp~~v~l~~~--~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (103)
T 2fcf_A 4 QPRRVELWRE--PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 81 (103)
T ss_dssp SCEEEEECCC--C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCEEEEEEeC--CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 5788999987 457899999864 269999999999999999 999999999999999999999999
Q ss_pred HHHHhhCCceeEEEEcCCC
Q psy12108 584 QLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 584 ~~ik~~g~~v~L~V~~~~~ 602 (665)
.+|+..++.++|+|.+...
T Consensus 82 ~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 82 EAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHHHTCCSSEEEEEECCCC
T ss_pred HHHHhCCCcEEEEEEECCC
Confidence 9999887799999987643
No 85
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.32 E-value=4.5e-12 Score=110.12 Aligned_cols=81 Identities=26% Similarity=0.500 Sum_probs=71.9
Q ss_pred ceeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
...|++.|+ ..+|||++.++ .+++|..|.|||||+++| |++||+|++|||.++.++++.++..+|+..
T Consensus 4 ~~~v~l~k~---~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (97)
T 2jil_A 4 TVEVTLHKE---GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC 80 (97)
T ss_dssp EEEEEEECB---TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred EEEEEEEeC---CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456788884 46999999875 379999999999999999 999999999999999999999999999998
Q ss_pred CCceeEEEEcCCC
Q psy12108 590 GKCLSLKLVTPMH 602 (665)
Q Consensus 590 g~~v~L~V~~~~~ 602 (665)
|..+.|+|.+...
T Consensus 81 g~~v~l~v~R~~~ 93 (97)
T 2jil_A 81 GQEAALLIEYDVS 93 (97)
T ss_dssp CSEEEEEEEEECC
T ss_pred CCeEEEEEEeCCC
Confidence 8899999987653
No 86
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.32 E-value=5.5e-12 Score=107.37 Aligned_cols=72 Identities=26% Similarity=0.399 Sum_probs=65.7
Q ss_pred CCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCC
Q psy12108 530 SDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 530 ~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~ 601 (665)
...+|||++.++. +++|..|.|+|||+++||++||+|++|||+++.++++.++.++|+..+..+.|+|.+..
T Consensus 10 ~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 10 GPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp SSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 3569999998764 79999999999999999999999999999999999999999999988888999998764
No 87
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.32 E-value=3.5e-12 Score=112.50 Aligned_cols=79 Identities=19% Similarity=0.450 Sum_probs=70.2
Q ss_pred ccceeEEeccCCCCCcceeEEEEc-----------CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHH
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRG-----------DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQL 585 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g-----------~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ 585 (665)
..+|.|.+.|. ..++|||++.+ ..+++|..|.++|||+++||++||+|++|||+++.++++.+++++
T Consensus 14 ~~~~~v~l~~~--~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 91 (104)
T 2z17_A 14 SQRKLVTVEKQ--DNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDL 91 (104)
T ss_dssp SCCCEEEEECC--TTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHH
T ss_pred CcceEEEEEeC--CCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHH
Confidence 35678889986 45789999997 238999999999999999999999999999999999999999999
Q ss_pred HHhhCCceeEEE
Q psy12108 586 IKDAGKCLSLKL 597 (665)
Q Consensus 586 ik~~g~~v~L~V 597 (665)
|+..++.|+|+|
T Consensus 92 l~~~~~~v~l~v 103 (104)
T 2z17_A 92 IRSSGNLLTIET 103 (104)
T ss_dssp HHHTTTEEEEEC
T ss_pred HHhCCCcEEEEE
Confidence 999877787776
No 88
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=4.4e-12 Score=112.41 Aligned_cols=81 Identities=17% Similarity=0.297 Sum_probs=72.4
Q ss_pred cceeEEeccCCCCCcceeEEEEc----------CCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRG----------DAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g----------~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
..+.|.|.++ ..+|||++.+ ..+++|..|.|+|||+++| |++||+|++|||+++.++++.+++.++
T Consensus 9 ~~~~v~l~k~---~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 85 (107)
T 1wf8_A 9 ELFPVELEKD---EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVL 85 (107)
T ss_dssp EEEEEEEECB---TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHH
T ss_pred eEEEEEEEEC---CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567888885 4599999998 1379999999999999999 999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCC
Q psy12108 587 KDAGKCLSLKLVTPM 601 (665)
Q Consensus 587 k~~g~~v~L~V~~~~ 601 (665)
+..+..|.|+|.+..
T Consensus 86 ~~~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 86 RNTKGNVRFVIGREK 100 (107)
T ss_dssp HHCCSEEEEEEEEEC
T ss_pred hcCCCeEEEEEEeCC
Confidence 998999999998754
No 89
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.32 E-value=8.6e-12 Score=111.81 Aligned_cols=83 Identities=23% Similarity=0.444 Sum_probs=74.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcCC-CCCCEEEEECCEecCCCChHHHHHHHHhhCCceeE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGGM-KDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSL 595 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aGL-k~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L 595 (665)
.+|+|++.|+ ..++|||++.+. .+++|..|.+||||+++|| ++||+|++|||++|.++++.+++.+|+..++.++|
T Consensus 25 ~~~~v~l~k~--~~~~lG~~i~~~~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 102 (113)
T 1va8_A 25 TVKIVRIEKA--RDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTF 102 (113)
T ss_dssp ECEEEEEEEC--TTCCCCEEEEECSSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEE
T ss_pred ceEEEEEEeC--CCCceeEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 5788999996 456999999875 5899999999999999999 99999999999999999999999999988888999
Q ss_pred EEEcCCC
Q psy12108 596 KLVTPMH 602 (665)
Q Consensus 596 ~V~~~~~ 602 (665)
+|.+...
T Consensus 103 ~v~r~~~ 109 (113)
T 1va8_A 103 VLIPSSG 109 (113)
T ss_dssp EEECCCC
T ss_pred EEEECCc
Confidence 9987543
No 90
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=5.1e-12 Score=111.54 Aligned_cols=82 Identities=17% Similarity=0.389 Sum_probs=71.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----Ce-EEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh--
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PV-IVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-- 589 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v-~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~-- 589 (665)
..|.|++.++ ..+|||+|.|+. |+ +|..|.+++||+++| |++||+|++|||+++.+++|++++++|+.+
T Consensus 6 ~~~~v~l~k~---~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 6 SGTLVRVKKS---AATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp SSEEEEEECC---SSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred ceEEEEEEcC---CCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 3678999884 569999999764 44 999999999999999 999999999999999999999999999985
Q ss_pred ---CCceeEEEEcCCC
Q psy12108 590 ---GKCLSLKLVTPMH 602 (665)
Q Consensus 590 ---g~~v~L~V~~~~~ 602 (665)
++.+++.|++...
T Consensus 83 ~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFNS 98 (103)
T ss_dssp CSSCSEEEEEECCCCC
T ss_pred cCCCCeEEEEEEEccc
Confidence 5678999887643
No 91
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.99 E-value=1.6e-13 Score=123.16 Aligned_cols=97 Identities=20% Similarity=0.384 Sum_probs=85.4
Q ss_pred HHhhcCcccccccccccccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhh-cCCCCCCEEEEECCEec
Q psy12108 500 LFKQLGPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDV 574 (665)
Q Consensus 500 ~f~~LgP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v 574 (665)
.+..-.|++.++....|..+|+|.+.|. ...+|||++.++ .+++|..|.+||||++ +||++||+|++|||+++
T Consensus 9 ~~~~~~~~~~~me~~~~~~~~~v~l~k~--~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v 86 (112)
T 2lob_A 9 HHSSGHIEGRHMENLYFQGIRKVLLLKE--DHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNL 86 (112)
Confidence 3445568888888888889999999997 567999999986 4799999999999999 99999999999999999
Q ss_pred CCCChHHHHHHHHhhCCceeEEEE
Q psy12108 575 KWSPHEEVVQLIKDAGKCLSLKLV 598 (665)
Q Consensus 575 ~~~~~~evv~~ik~~g~~v~L~V~ 598 (665)
.+.++.+++.+++..++.++|+|.
T Consensus 87 ~~~~~~~~~~~l~~~~~~v~l~V~ 110 (112)
T 2lob_A 87 RDTKHKEAVTILSQQRGEIEFEVV 110 (112)
Confidence 999999999999988877888775
No 92
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.31 E-value=7.3e-12 Score=110.85 Aligned_cols=81 Identities=32% Similarity=0.507 Sum_probs=72.4
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcC--CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGG--MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aG--Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
...+.|.+.++ ...+|||.+.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.+++.+|+..+
T Consensus 16 ~~~~~v~l~~~--~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 16 DNLVLIRMKPD--ENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp CCCEEEEECCC--TTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCEEEEEEEcC--CCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 35688999997 457999999874 378999999999999999 9999999999999999999999999999886
Q ss_pred C----ceeEEEEc
Q psy12108 591 K----CLSLKLVT 599 (665)
Q Consensus 591 ~----~v~L~V~~ 599 (665)
. .|.|+|.+
T Consensus 94 ~~~~~~v~l~v~r 106 (107)
T 3nfk_A 94 ERHSGELMLLVRP 106 (107)
T ss_dssp GSBTTBEEEEEEC
T ss_pred ccCCcEEEEEEEc
Confidence 5 89998875
No 93
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.31 E-value=6.2e-12 Score=106.39 Aligned_cols=77 Identities=30% Similarity=0.448 Sum_probs=68.0
Q ss_pred eeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeE
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSL 595 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L 595 (665)
.+|++. + ..+|||++.++. +++|..|.|+|||+++||++||+|++|||.++.++++.+++..++..+..+.|
T Consensus 3 ~~v~l~-~---~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 78 (85)
T 1rgw_A 3 YSVTLT-G---PGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSL 78 (85)
T ss_dssp EEEEEC-C---SSCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEE
T ss_pred EEEEEe-C---CCccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEE
Confidence 456774 3 358999998764 78999999999999999999999999999999999999999999988888999
Q ss_pred EEEcC
Q psy12108 596 KLVTP 600 (665)
Q Consensus 596 ~V~~~ 600 (665)
+|.+.
T Consensus 79 ~v~R~ 83 (85)
T 1rgw_A 79 TLQKS 83 (85)
T ss_dssp EEESC
T ss_pred EEEeC
Confidence 99765
No 94
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.31 E-value=9.9e-12 Score=109.08 Aligned_cols=82 Identities=18% Similarity=0.338 Sum_probs=71.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC------CeEEEEeCCCChhhh-cCCCCCCEEEEECCEecCCCChHHHHHHHHh-
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA------PVIVASVDSGSLAQF-GGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD- 588 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~------~v~V~~V~pgspA~~-aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~- 588 (665)
...|.|++.|. ...+|||++.+.. +++|..|.+||||++ +||++||+|++|||+++.+.++++++++|+.
T Consensus 8 ~~~~~v~l~k~--~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 8 DNCREVHLEKR--RGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp CCCEEEEEECC--TTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CceEEEEEEeC--CCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35678889886 4469999998543 699999999999999 7899999999999999999999999999998
Q ss_pred -hCCceeEEEEcC
Q psy12108 589 -AGKCLSLKLVTP 600 (665)
Q Consensus 589 -~g~~v~L~V~~~ 600 (665)
.|..|+|+|.+.
T Consensus 86 ~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 86 KSQTSVTLSIVHC 98 (101)
T ss_dssp TTSSEEEEEECCC
T ss_pred CCCCeEEEEEEeC
Confidence 578999999764
No 95
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.31 E-value=1.1e-11 Score=106.32 Aligned_cols=81 Identities=23% Similarity=0.331 Sum_probs=71.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
..+.|++.|.+ ...+|||++.++ .+++|..|.+||||+++||++||+|++|||+++.++++.+++.+++..|..+.
T Consensus 6 ~~~~v~l~k~~-~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 84 (91)
T 1m5z_A 6 ELHKVTLYKDS-GMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLD 84 (91)
T ss_dssp EEEEEEEECCT-TCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred ceEEEEEEECC-CCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 45678888853 246899999875 38999999999999999999999999999999999999999999998888999
Q ss_pred EEEEc
Q psy12108 595 LKLVT 599 (665)
Q Consensus 595 L~V~~ 599 (665)
|+|.+
T Consensus 85 l~v~R 89 (91)
T 1m5z_A 85 LVISR 89 (91)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
No 96
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.30 E-value=5.7e-12 Score=107.72 Aligned_cols=71 Identities=25% Similarity=0.479 Sum_probs=64.5
Q ss_pred CcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCC
Q psy12108 531 DTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 531 ~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~ 601 (665)
..+|||++.++ .|++|..|.|+|||+++||++||+|++|||+++.++++.+++.+++..|..+.|+|.+..
T Consensus 12 ~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 12 PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAI 86 (89)
T ss_dssp SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEEC
T ss_pred CCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 35899999874 378999999999999999999999999999999999999999999988889999998754
No 97
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.30 E-value=3.5e-12 Score=116.86 Aligned_cols=80 Identities=18% Similarity=0.364 Sum_probs=70.0
Q ss_pred eEEeccCCCCCcceeEEEEcCC--------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh--
Q psy12108 521 SIQLQRANNSDTGFGFSVRGDA--------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-- 589 (665)
Q Consensus 521 ~v~l~rg~~~~~g~Gf~l~g~~--------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~-- 589 (665)
.|.+.++ ...||||++.++. +++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+..
T Consensus 28 ~v~l~k~--~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 28 EIPLNDS--GSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEECSSS--TTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEeeC--CCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 3556544 5779999998753 79999999999999999 999999999999999999999999999976
Q ss_pred -----CCceeEEEEcCCC
Q psy12108 590 -----GKCLSLKLVTPMH 602 (665)
Q Consensus 590 -----g~~v~L~V~~~~~ 602 (665)
+..|+|+|.+...
T Consensus 106 ~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHTCEEEEEEEECSC
T ss_pred cccCCCCEEEEEEEeCCC
Confidence 7899999987643
No 98
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.30 E-value=8.4e-12 Score=108.85 Aligned_cols=79 Identities=32% Similarity=0.458 Sum_probs=69.2
Q ss_pred eEEeccCCCCCcceeEEEEcCC-----------CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 521 SIQLQRANNSDTGFGFSVRGDA-----------PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 521 ~v~l~rg~~~~~g~Gf~l~g~~-----------~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
+|.+.++ ..+|||++.+.. +++|..|.+||||+++||++||+|++|||.++.++++.+++.+++..
T Consensus 5 ~v~l~~~---~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSS---GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC----CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeC---CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4678885 459999988532 55899999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEcCCC
Q psy12108 590 GKCLSLKLVTPMH 602 (665)
Q Consensus 590 g~~v~L~V~~~~~ 602 (665)
|+.+.|+|.+.+.
T Consensus 82 g~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 GNKISLRTTALEN 94 (99)
T ss_dssp CSEEEEEEECSCS
T ss_pred CCEEEEEEEECCC
Confidence 9999999998654
No 99
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=6.9e-12 Score=110.75 Aligned_cols=81 Identities=28% Similarity=0.482 Sum_probs=72.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLI 586 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~i 586 (665)
...+|.|.|+ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.++
T Consensus 7 ~~~~v~l~~~---~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 7 GRHVACLARS---ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp EEEEEEECCC---TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred eeEEEEEEeC---CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3456888885 45899999973 489999999999999999 999999999999999999999999999
Q ss_pred HhhCCceeEEEEcCC
Q psy12108 587 KDAGKCLSLKLVTPM 601 (665)
Q Consensus 587 k~~g~~v~L~V~~~~ 601 (665)
+..+..+.|+|.+..
T Consensus 84 ~~~g~~v~l~v~R~~ 98 (105)
T 1wha_A 84 TAASPTIALLLEREA 98 (105)
T ss_dssp TSCCSCEEEEEEECC
T ss_pred HcCCCeEEEEEEECC
Confidence 988889999998764
No 100
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.30 E-value=1.8e-11 Score=109.02 Aligned_cols=81 Identities=28% Similarity=0.464 Sum_probs=71.2
Q ss_pred ceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh-
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA- 589 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~- 589 (665)
...+.+.++ ..+|||++.+. .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 12 ~~~~~l~~~---~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 12 RLNIQLKKG---TEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp EEEEEEECB---TTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred EEEEEEEEC---CCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 455778874 56999999865 379999999999999999 999999999999999999999999999985
Q ss_pred -CCceeEEEEcCCC
Q psy12108 590 -GKCLSLKLVTPMH 602 (665)
Q Consensus 590 -g~~v~L~V~~~~~ 602 (665)
|..|.|+|.+...
T Consensus 89 ~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 89 MEGTVSLLVFRQEE 102 (111)
T ss_dssp CSSEEEEEEEECCC
T ss_pred CCCeEEEEEEeCCC
Confidence 7899999987654
No 101
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.29 E-value=9.8e-12 Score=106.38 Aligned_cols=78 Identities=18% Similarity=0.359 Sum_probs=67.2
Q ss_pred EEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcC
Q psy12108 522 IQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTP 600 (665)
Q Consensus 522 v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~ 600 (665)
+.+.+.. ...+|||.+.+ +++|..|.+||||+++| |++||+|++|||+++.+++|++++++|++.++.+.|+|.+.
T Consensus 4 v~l~~~~-~~~~~G~~~~~--gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~ 80 (88)
T 3e17_A 4 VLLMKSR-ANEEYGLRLGS--QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRD 80 (88)
T ss_dssp EEEECBT-TBCCCCEEEEE--EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC
T ss_pred EEEEeCC-CCCCCCEEEeC--CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCC
Confidence 3455432 35689999876 79999999999999999 99999999999999999999999999999999999999876
Q ss_pred CC
Q psy12108 601 MH 602 (665)
Q Consensus 601 ~~ 602 (665)
..
T Consensus 81 ~~ 82 (88)
T 3e17_A 81 LE 82 (88)
T ss_dssp --
T ss_pred Cc
Confidence 44
No 102
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=2.2e-12 Score=112.21 Aligned_cols=83 Identities=20% Similarity=0.406 Sum_probs=75.1
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEE
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLK 596 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~ 596 (665)
..+++|+|.|.+ ...+|||.+.+..|++|..|.++|||+ +||++||+|++|||++|.++++.+++.+++..|+.|.|+
T Consensus 7 ~~~~~v~l~~~~-~~~~~G~~l~~~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 84 (96)
T 2edv_A 7 GVRHTVKIDKDT-LLQDYGFHISESLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSIT 84 (96)
T ss_dssp CEEEEEEECCCS-SSCSCSBCCCSSSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEE
T ss_pred CccEEEEEEECC-CCCcccEEEecCCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 457889999974 235899999998899999999999996 999999999999999999999999999999889999999
Q ss_pred EEcCC
Q psy12108 597 LVTPM 601 (665)
Q Consensus 597 V~~~~ 601 (665)
|.+..
T Consensus 85 v~R~~ 89 (96)
T 2edv_A 85 VVRCT 89 (96)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99865
No 103
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=110.06 Aligned_cols=73 Identities=27% Similarity=0.494 Sum_probs=67.1
Q ss_pred CCcceeEEEEcCC---------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEc
Q psy12108 530 SDTGFGFSVRGDA---------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVT 599 (665)
Q Consensus 530 ~~~g~Gf~l~g~~---------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~ 599 (665)
+..+|||++.|+. +++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..+..|+|+|.+
T Consensus 11 ~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 90 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAK 90 (106)
T ss_dssp -CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEEC
T ss_pred CCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEe
Confidence 5679999999763 78999999999999999 9999999999999999999999999999998899999998
Q ss_pred CCC
Q psy12108 600 PMH 602 (665)
Q Consensus 600 ~~~ 602 (665)
...
T Consensus 91 ~~~ 93 (106)
T 4amh_A 91 PGS 93 (106)
T ss_dssp CSS
T ss_pred CCC
Confidence 754
No 104
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=5.2e-12 Score=113.85 Aligned_cols=84 Identities=24% Similarity=0.434 Sum_probs=74.5
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
.+++|+|.|+ ...+|||++.++ .+++|..|.++|||+ +||++||+|++|||+++.+++|.+++.+++
T Consensus 14 ~~~~v~l~k~--~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 14 EQYTVTLQKD--SKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EEEEEEEECC--SSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred eEEEEEEEEC--CCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 4678999997 457999999975 268999999999997 999999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCCCC
Q psy12108 588 DAGKCLSLKLVTPMHKN 604 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~~~ 604 (665)
..+..+.|+|.+.....
T Consensus 91 ~~~~~v~l~v~R~~~~~ 107 (117)
T 2csj_A 91 KSGKIAAIVVKRPRKVQ 107 (117)
T ss_dssp HSCSEEEEEEEEEEECC
T ss_pred cCCCeEEEEEEECCccc
Confidence 98999999999865433
No 105
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.29 E-value=9.3e-12 Score=111.50 Aligned_cols=84 Identities=23% Similarity=0.311 Sum_probs=71.2
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v 593 (665)
...++|+|.|++ .||||+|.++. +.+|..|.+ +|+.+||++||+|++|||++|.+++|.|++++|+.+ |..|
T Consensus 11 ~~~~~V~L~Kg~---~G~GFsI~~~~~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v 85 (113)
T 3soe_A 11 GLLVTIPLIKGP---KGFGFAIADSPTGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADV 85 (113)
T ss_dssp CEEEEEEEECBT---TBSSEEEEEETTEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEE
T ss_pred CCEEEEEEEECC---CcccEEEeCCCCCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 356789999974 49999998654 577999988 577899999999999999999999999999999986 7799
Q ss_pred eEEEEcCCCCCC
Q psy12108 594 SLKLVTPMHKNN 605 (665)
Q Consensus 594 ~L~V~~~~~~~~ 605 (665)
+|+|.+......
T Consensus 86 ~L~V~R~g~~~p 97 (113)
T 3soe_A 86 PLLILRGGPPSP 97 (113)
T ss_dssp EEEEEESSCC--
T ss_pred EEEEEECCccCc
Confidence 999998765433
No 106
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=106.70 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=73.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
..+|+|++.+. ..+.|||++.+. .+++|..|.++|||+++||++||+|++|||+++.++++.+++..++. +..
T Consensus 9 ~~~~~v~l~~~--~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 9 DIIHSVRVEKS--PAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSR 85 (100)
T ss_dssp CEECCEEECCC--SSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSS
T ss_pred CeEEEEEEEEC--CCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCE
Confidence 35788999997 456799999876 48999999999999999999999999999999999999999999988 889
Q ss_pred eeEEEEcCCC
Q psy12108 593 LSLKLVTPMH 602 (665)
Q Consensus 593 v~L~V~~~~~ 602 (665)
+.|+|.+...
T Consensus 86 v~l~v~R~g~ 95 (100)
T 2eeh_A 86 LHMMVRRMGS 95 (100)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEECCc
Confidence 9999988654
No 107
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.29 E-value=2.1e-11 Score=109.59 Aligned_cols=83 Identities=22% Similarity=0.356 Sum_probs=73.3
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
..+|+|.+.++ ..++|||++.++. +++|..|.+||||+++| |++||+|++|||.++.+.++.++..+|+..++
T Consensus 23 ~~~~~V~l~~~--~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 100 (114)
T 2gzv_A 23 MVPGKVTLQKD--AQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 100 (114)
T ss_dssp CCCEEEEEECC--TTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCCEEEEEEEC--CCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35789999998 4567999998764 59999999999999999 99999999999999998999999999998877
Q ss_pred ceeEEEEcCC
Q psy12108 592 CLSLKLVTPM 601 (665)
Q Consensus 592 ~v~L~V~~~~ 601 (665)
.++|+|.+..
T Consensus 101 ~v~l~v~~~~ 110 (114)
T 2gzv_A 101 EVTIHYNKLQ 110 (114)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEecc
Confidence 8888887543
No 108
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.2e-11 Score=109.73 Aligned_cols=84 Identities=21% Similarity=0.364 Sum_probs=74.7
Q ss_pred cccceeEEeccCCCCCcceeEEEE-----cC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHH
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVR-----GD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEV 582 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~-----g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~ev 582 (665)
....++|+|.|+ ..+|||++. |+ .+++|..|.++|||+++| |++||+|++|||+++.++++.++
T Consensus 7 ~~~~~~v~l~k~---~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 83 (108)
T 1q7x_A 7 PGDIFEVELAKN---DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQA 83 (108)
T ss_dssp SSSEEEEEEESS---SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHH
T ss_pred CCcEEEEEEEEC---CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 345678999995 459999998 53 489999999999999999 99999999999999999999999
Q ss_pred HHHHHhhCCceeEEEEcCCC
Q psy12108 583 VQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 583 v~~ik~~g~~v~L~V~~~~~ 602 (665)
+.+++..|..+.|+|.+...
T Consensus 84 ~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 84 VETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHHTTSEEEEEEECCCC
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 99999989999999987643
No 109
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.5e-11 Score=109.40 Aligned_cols=83 Identities=19% Similarity=0.278 Sum_probs=74.2
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
...++|+|.+++ .+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 7 ~~~~~v~l~~~~---~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 7 GYVFTVELERGP---SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp CCEEEEEEECCT---TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred CcEEEEEEEECC---CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 356778999963 5999999874 379999999999999999 99999999999999999999999999999
Q ss_pred hCCceeEEEEcCCC
Q psy12108 589 AGKCLSLKLVTPMH 602 (665)
Q Consensus 589 ~g~~v~L~V~~~~~ 602 (665)
.+..+.|+|.+...
T Consensus 84 ~~~~v~l~v~R~~~ 97 (110)
T 1um1_A 84 GGKKMRFLVAKSDV 97 (110)
T ss_dssp CCSEEEEEEECCCH
T ss_pred CCCeEEEEEEeCCc
Confidence 88899999998754
No 110
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.28 E-value=7.7e-12 Score=113.93 Aligned_cols=82 Identities=22% Similarity=0.390 Sum_probs=74.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-----CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-----APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-----~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
..+.|.+.|+ ..+|||++.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.+++.+++..+.
T Consensus 25 ~~~~v~l~k~---~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~ 101 (124)
T 2daz_A 25 ELHIIELEKD---KNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPS 101 (124)
T ss_dssp EEEEEEEECC---SSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCS
T ss_pred ceEEEEEEeC---CCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4578999995 45999999975 389999999999999999 99999999999999999999999999999888
Q ss_pred ceeEEEEcCCC
Q psy12108 592 CLSLKLVTPMH 602 (665)
Q Consensus 592 ~v~L~V~~~~~ 602 (665)
.|.|+|.+...
T Consensus 102 ~v~l~v~R~~~ 112 (124)
T 2daz_A 102 KVKLVFIRNED 112 (124)
T ss_dssp EEEEEEEECTT
T ss_pred eEEEEEEeCCC
Confidence 99999988654
No 111
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.28 E-value=1.2e-11 Score=106.19 Aligned_cols=80 Identities=29% Similarity=0.424 Sum_probs=70.1
Q ss_pred ceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
++.|.+.. ..+|||++.++ .+++|..|.|+|||+++||++||+|++|||+++.++++.++..+++..|..+.
T Consensus 4 ~~~v~~~~----~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 4 TQQIDLQG----PGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEEES----SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred cEEEEECC----CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45566664 35899999876 37899999999999999999999999999999999999999999999888999
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
|+|.+.+.
T Consensus 80 l~v~R~g~ 87 (91)
T 2pkt_A 80 LTVARSEH 87 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEECCc
Confidence 99987653
No 112
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.28 E-value=1.2e-11 Score=110.53 Aligned_cols=82 Identities=15% Similarity=0.289 Sum_probs=72.8
Q ss_pred ceeEEeccCCCCCcceeEEEEc----------CCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRG----------DAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g----------~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
.+.|++.++ ..+|||++.+ ..+++|..|.|||||+++| |++||+|++|||.++.++++.+++.+++
T Consensus 5 ~~~v~l~k~---~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (113)
T 2g5m_B 5 LFPVELEKD---SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 81 (113)
T ss_dssp EEEEECCCC---SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEEeC---CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 456888885 4599999988 2389999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCCC
Q psy12108 588 DAGKCLSLKLVTPMHK 603 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~~ 603 (665)
..|..+.|+|.+....
T Consensus 82 ~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 82 NTKGRVRFMIGRERPG 97 (113)
T ss_dssp HSCSSCEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCCC
Confidence 9999999999986543
No 113
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=4.8e-12 Score=110.88 Aligned_cols=82 Identities=27% Similarity=0.408 Sum_probs=73.1
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEE
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLK 596 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~ 596 (665)
.....+++.++ ..+|||.+.+..+++|..|.+++||+++||++||+|++|||+++.++++.+++.+|+..+..|.|+
T Consensus 14 ~~~~~v~l~~~---~~g~G~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 90 (100)
T 1whd_A 14 GEKLQITIRRG---KDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILL 90 (100)
T ss_dssp CEEEEEEEECC---SSSSSCBCCCSSSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEE
T ss_pred cceEEEEEECC---CCeeeEEEeCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 34566888884 569999998888999999999999999999999999999999999999999999999887789999
Q ss_pred EEcCC
Q psy12108 597 LVTPM 601 (665)
Q Consensus 597 V~~~~ 601 (665)
|.+..
T Consensus 91 v~R~~ 95 (100)
T 1whd_A 91 VWRVS 95 (100)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98753
No 114
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=107.26 Aligned_cols=80 Identities=29% Similarity=0.466 Sum_probs=70.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
.++.|.+.+ ..+|||.+.++ .+++|..|.|++||+++||++||+|++|||+++.++++.+++.+++..+..+
T Consensus 8 ~~~~v~l~~----~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 8 MPHSVTLRG----PSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp CCEEEEECC----SSCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred ceEEEEEeC----CCccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 357788843 34899999985 3799999999999999999999999999999999999999999999888899
Q ss_pred eEEEEcCC
Q psy12108 594 SLKLVTPM 601 (665)
Q Consensus 594 ~L~V~~~~ 601 (665)
.|+|.+..
T Consensus 84 ~l~v~R~g 91 (94)
T 2eeg_A 84 TLSVSSGP 91 (94)
T ss_dssp EEEEECCS
T ss_pred EEEEEeCC
Confidence 99998754
No 115
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.27 E-value=2.5e-11 Score=111.40 Aligned_cols=81 Identities=28% Similarity=0.459 Sum_probs=71.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh--C
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--G 590 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g 590 (665)
...+|++.|+ ..+|||++.++. +++|..|.+||||+++| |++||+|++|||++|.+++|.+++++|+.. |
T Consensus 18 ~~~~v~l~~~---~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g 94 (129)
T 2kpk_A 18 KFIHTKLRKS---SRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 94 (129)
T ss_dssp EEEEEEEEEC---SSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTT
T ss_pred cEEEEEEEEC---CCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 3456889985 459999999742 59999999999999999 999999999999999999999999999987 6
Q ss_pred CceeEEEEcCC
Q psy12108 591 KCLSLKLVTPM 601 (665)
Q Consensus 591 ~~v~L~V~~~~ 601 (665)
..|+|+|.+..
T Consensus 95 ~~v~l~v~R~~ 105 (129)
T 2kpk_A 95 ASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEEECS
T ss_pred CeEEEEEEeCC
Confidence 78999998764
No 116
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.26 E-value=1.7e-11 Score=109.97 Aligned_cols=83 Identities=25% Similarity=0.468 Sum_probs=73.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
.|+++.+.+. ...+|||.+.++ .+++|..|.+||||+++||++||+|++|||+++.++++.+++..++..|+.+.
T Consensus 13 dp~~~~l~~~--~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 90 (114)
T 2edz_A 13 NPRECKLSKQ--EGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVT 90 (114)
T ss_dssp CCEEEEEECC--TTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEE
T ss_pred CCEEEEEeCC--CCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 5677778876 467899988854 48999999999999999999999999999999999999999999998889999
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
|+|.+...
T Consensus 91 l~v~R~~~ 98 (114)
T 2edz_A 91 LLVLDGDS 98 (114)
T ss_dssp EEEECHHH
T ss_pred EEEEECCc
Confidence 99987654
No 117
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.26 E-value=2.8e-11 Score=107.28 Aligned_cols=81 Identities=27% Similarity=0.461 Sum_probs=71.2
Q ss_pred ceeEEecc-CCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 519 PRSIQLQR-ANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 519 ~r~v~l~r-g~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
...|.+.| + ...+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 13 ~~~v~l~r~~--~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 13 LYSVELFREK--DTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp EEEEEEECCS--TTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEEEecC--CCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45677853 3 567999999864 389999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCC
Q psy12108 588 DAGKCLSLKLVTPM 601 (665)
Q Consensus 588 ~~g~~v~L~V~~~~ 601 (665)
..|..+.|+|.+..
T Consensus 91 ~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 91 NAGNPVRLLLIRRL 104 (108)
T ss_dssp HHCSEEEEEEEECC
T ss_pred cCCCeEEEEEEeCC
Confidence 88889999998764
No 118
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.26 E-value=2.4e-11 Score=107.79 Aligned_cols=79 Identities=18% Similarity=0.355 Sum_probs=70.2
Q ss_pred eEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEE
Q psy12108 521 SIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLV 598 (665)
Q Consensus 521 ~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~ 598 (665)
+|.|.+. ...|+||++.+. .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..++.|.|+|.
T Consensus 5 ~v~L~k~--~~~glG~~i~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~ 82 (106)
T 2la8_A 5 NVDLMKK--AGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVT 82 (106)
T ss_dssp EEEECCB--SSSTTCCEEEECSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEE
T ss_pred EEEEEeC--CCCccCEEEEeCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEE
Confidence 4678765 467899998763 489999999999999999 999999999999999999999999999998889999998
Q ss_pred cCC
Q psy12108 599 TPM 601 (665)
Q Consensus 599 ~~~ 601 (665)
+..
T Consensus 83 R~~ 85 (106)
T 2la8_A 83 RPK 85 (106)
T ss_dssp ECC
T ss_pred eCC
Confidence 763
No 119
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.26 E-value=2.2e-11 Score=107.75 Aligned_cols=82 Identities=21% Similarity=0.426 Sum_probs=72.6
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
.+++|++.|+ ...+|||++.++ .+++|..|.+||||+ +||++||+|++|||+++.++++.+.+..++
T Consensus 7 ~~~~v~l~k~--~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 7 EQHTVTLHRA--PGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEECB--TTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eeEEEEEEeC--CCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 4688999997 457999999853 389999999999999 999999999999999999999888888888
Q ss_pred hhCCceeEEEEcCCC
Q psy12108 588 DAGKCLSLKLVTPMH 602 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~ 602 (665)
..|..+.|+|.+...
T Consensus 84 ~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 84 KSGKNAKITIRRKKG 98 (107)
T ss_dssp TCCSEEEEEEEEESC
T ss_pred CCCCEEEEEEEECCC
Confidence 778999999987654
No 120
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=2.8e-11 Score=104.14 Aligned_cols=77 Identities=27% Similarity=0.516 Sum_probs=66.2
Q ss_pred ceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEE
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLV 598 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~ 598 (665)
++.+.+.+.. ...+|||.+.++ +|..|.+||||+++||++||+|++|||+++.+.++.+++.+|+..|..+.|+|.
T Consensus 12 ~~~~~i~~~~-~~~~lG~~~~~G---~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~ 87 (90)
T 1y7n_A 12 VTTVLIRRPD-LRYQLGFSVQNG---IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTM 87 (90)
T ss_dssp CEEEEEEESS-TTSCCCEEEETT---EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEE
T ss_pred cceEEEEeCC-CccccCeEecCC---EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 3444444432 467899998765 899999999999999999999999999999999999999999988889999987
Q ss_pred c
Q psy12108 599 T 599 (665)
Q Consensus 599 ~ 599 (665)
+
T Consensus 88 p 88 (90)
T 1y7n_A 88 P 88 (90)
T ss_dssp C
T ss_pred E
Confidence 5
No 121
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.25 E-value=2.5e-11 Score=105.51 Aligned_cols=81 Identities=17% Similarity=0.327 Sum_probs=71.3
Q ss_pred ceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEE
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLK 596 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~ 596 (665)
..++.+.++ ...++||.+.+. .+++|..|.|||||+++| |++||+|++|||+++.++++.+++.+++..+..++|+
T Consensus 9 ~~~v~l~~~--~~~glG~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~ 86 (96)
T 2qkv_A 9 KFNVDLMKK--AGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSME 86 (96)
T ss_dssp CEEEEEECB--TTBCCCEEEEECSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred eEEEEEEeC--CCCCccEEEEeCCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 345778765 567899998763 489999999999999999 9999999999999999999999999999988899999
Q ss_pred EEcCC
Q psy12108 597 LVTPM 601 (665)
Q Consensus 597 V~~~~ 601 (665)
|.++.
T Consensus 87 v~R~~ 91 (96)
T 2qkv_A 87 VTRPK 91 (96)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98763
No 122
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.25 E-value=3.7e-11 Score=104.17 Aligned_cols=80 Identities=19% Similarity=0.409 Sum_probs=70.4
Q ss_pred eeEEeccCCCCCcceeEEEEcC----------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD----------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~----------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
..+.+.+ ...+|||++.++ .+++|..|.+||||+++||++||+|++|||+++.++++.+++..++..
T Consensus 5 ~~v~~~~---~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 5 LTLTILR---QTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp EEEEEEC---BTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEe---CCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 4467777 456999999852 489999999999999999999999999999999999998888888888
Q ss_pred CCceeEEEEcCCC
Q psy12108 590 GKCLSLKLVTPMH 602 (665)
Q Consensus 590 g~~v~L~V~~~~~ 602 (665)
|..+.|+|.+.+.
T Consensus 82 g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 82 GTAVQMRVWRERE 94 (97)
T ss_dssp CSEEEEEEECCSS
T ss_pred CCeEEEEEEeCCc
Confidence 8999999998654
No 123
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.25 E-value=1.6e-11 Score=118.24 Aligned_cols=78 Identities=15% Similarity=0.320 Sum_probs=70.2
Q ss_pred ceeEEeccCCCCCcceeEEEEc---C-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRG---D-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g---~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..+|.|.|+ ..||||+|.+ + .+++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+
T Consensus 81 ~~~v~l~k~---~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 81 LFPVELEKD---SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp EEEEEEECB---TTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred EEEEEEEeC---CCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 355788886 3599999998 1 369999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEc
Q psy12108 588 DAGKCLSLKLVT 599 (665)
Q Consensus 588 ~~g~~v~L~V~~ 599 (665)
+.|..|+|+|.+
T Consensus 158 ~~g~~v~L~V~R 169 (170)
T 3egg_C 158 NTKGRVRFMIGR 169 (170)
T ss_dssp HCCSEEEEEEEE
T ss_pred cCCCEEEEEEEe
Confidence 999999999976
No 124
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.25 E-value=4.4e-11 Score=106.37 Aligned_cols=82 Identities=20% Similarity=0.409 Sum_probs=71.9
Q ss_pred cceeEEeccCCCCCcceeEEEEc----------CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRG----------DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g----------~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
....+.+.+ ...+|||++.+ ..+++|..|.++|||+++||++||+|++|||+++.++++.+++..++
T Consensus 15 ~~~~~~l~~---~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 15 EELTLTILR---QTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp EEEEEEEEC---SSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEec---CCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 345677887 46799999984 24899999999999999999999999999999999999999999998
Q ss_pred hhCCceeEEEEcCCC
Q psy12108 588 DAGKCLSLKLVTPMH 602 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~ 602 (665)
..|..|.|+|.+...
T Consensus 92 ~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 92 GAGTAVQMRVWRESG 106 (110)
T ss_dssp SCCSEEEEEEEECSS
T ss_pred CCCCeEEEEEEECCc
Confidence 888999999998653
No 125
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.25 E-value=2.6e-11 Score=107.17 Aligned_cols=79 Identities=20% Similarity=0.387 Sum_probs=69.4
Q ss_pred eeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
.+|++ ++ ..+|||++.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..|.
T Consensus 13 ~~v~l-~~---~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 13 ITVTL-KK---QNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp EEEEE-EC---SSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred EEEEE-CC---CCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 44556 63 56999999862 279999999999999999 99999999999999999999999999999899
Q ss_pred ceeEEEEcCCC
Q psy12108 592 CLSLKLVTPMH 602 (665)
Q Consensus 592 ~v~L~V~~~~~ 602 (665)
.+.|+|.+...
T Consensus 89 ~v~l~v~R~~~ 99 (106)
T 3axa_A 89 VVTLEVAKQGA 99 (106)
T ss_dssp EEEEEEECCCS
T ss_pred eEEEEEEeCCc
Confidence 99999997653
No 126
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.24 E-value=1.8e-11 Score=104.33 Aligned_cols=79 Identities=23% Similarity=0.464 Sum_probs=66.5
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~ 592 (665)
..++|+|.|++ .||||++.+. .+++|..| ++|||+ +||++||+|++|||+++.++++.+++..++. .|..
T Consensus 3 ~~~~v~l~k~~---~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~ 77 (88)
T 3bpu_A 3 ELITVHIVKGP---MGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSE 77 (88)
T ss_dssp EEEEEEEECBT---TBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCE
T ss_pred cEEEEEEEcCC---CceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCE
Confidence 46789999964 5999999865 37888886 999999 9999999999999999999999999999985 4778
Q ss_pred eeEEEEcCC
Q psy12108 593 LSLKLVTPM 601 (665)
Q Consensus 593 v~L~V~~~~ 601 (665)
+.|+|.+..
T Consensus 78 v~l~v~R~g 86 (88)
T 3bpu_A 78 VTLLVQRQT 86 (88)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999998753
No 127
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.24 E-value=1.3e-11 Score=113.74 Aligned_cols=80 Identities=24% Similarity=0.327 Sum_probs=69.4
Q ss_pred eeEEeccCCCCCcceeEEEEcC-------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC-
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD-------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG- 590 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~-------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g- 590 (665)
+.+.+.+. ...+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.+++|.+++.+|+..+
T Consensus 38 ~~~~i~k~--~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 115 (131)
T 1wfg_A 38 KDGSVPRD--SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKP 115 (131)
T ss_dssp TTSCCCSC--SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSS
T ss_pred eeEEEecC--CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 44556665 467999999873 279999999999999999 9999999999999999999999999999864
Q ss_pred -CceeEEEEcCC
Q psy12108 591 -KCLSLKLVTPM 601 (665)
Q Consensus 591 -~~v~L~V~~~~ 601 (665)
..|+|+|.+..
T Consensus 116 g~~v~l~v~R~g 127 (131)
T 1wfg_A 116 EPQVELVVSRSG 127 (131)
T ss_dssp SSEEEEEEEEEC
T ss_pred CCEEEEEEEcCC
Confidence 78999998764
No 128
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.24 E-value=1.9e-11 Score=107.55 Aligned_cols=81 Identities=22% Similarity=0.371 Sum_probs=70.2
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
...+|.+. + ..+|||++.++. +++|..|.++|||+++||++||+|++|||+++.++++.+++.+++..+..+
T Consensus 5 ~~~~v~l~-~---~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 80 (103)
T 1wf7_A 5 SSGSVSLV-G---PAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSL 80 (103)
T ss_dssp CCEEEEEE-S---SSCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEE
T ss_pred CEEEEEEe-C---CCccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 34567776 3 358999998753 689999999999999999999999999999999999999999999888899
Q ss_pred eEEEEcCCC
Q psy12108 594 SLKLVTPMH 602 (665)
Q Consensus 594 ~L~V~~~~~ 602 (665)
.|+|.+...
T Consensus 81 ~l~v~R~g~ 89 (103)
T 1wf7_A 81 NMTLQRASA 89 (103)
T ss_dssp EEEECCCSC
T ss_pred EEEEEeCCC
Confidence 999987654
No 129
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=5.1e-11 Score=107.24 Aligned_cols=83 Identities=18% Similarity=0.365 Sum_probs=72.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
..+|.|.+.+. ..+|||.+.++ .+++|..|.+++||+++||++||+|++|||+++.++++.+++..++..+..+.
T Consensus 18 ~~~~~v~l~~~---~~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~ 94 (117)
T 1uit_A 18 EEPRHVKVQKG---SEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTIT 94 (117)
T ss_dssp CCCEEEEEECS---SCCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEE
T ss_pred CCCEEEEEEeC---CCCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 35788999985 45999999876 48999999999999999999999999999999999998888877777788999
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
|+|.+...
T Consensus 95 l~v~r~~~ 102 (117)
T 1uit_A 95 ILAQYNPH 102 (117)
T ss_dssp EEECCCSC
T ss_pred EEEEECCc
Confidence 99987643
No 130
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.22 E-value=1.2e-11 Score=108.45 Aligned_cols=81 Identities=27% Similarity=0.457 Sum_probs=71.2
Q ss_pred ceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
...+.+.++ ..||||++.++. +++|..|.+||||+++| |++||+|++|||+++.++++.+++.+++..|..+
T Consensus 12 ~~~v~l~~~---~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 88 (103)
T 1wfv_A 12 YFTVDMEKG---AKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRV 88 (103)
T ss_dssp CEECCEECC---TTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEE
T ss_pred EEEEEEecC---CCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 455778774 458999998653 79999999999999999 9999999999999999999999999999889999
Q ss_pred eEEEEcCCC
Q psy12108 594 SLKLVTPMH 602 (665)
Q Consensus 594 ~L~V~~~~~ 602 (665)
.|+|.+...
T Consensus 89 ~l~v~R~~~ 97 (103)
T 1wfv_A 89 RLLLKRGTG 97 (103)
T ss_dssp CEEEECTTC
T ss_pred EEEEEECCC
Confidence 999987643
No 131
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=3.7e-11 Score=110.07 Aligned_cols=83 Identities=27% Similarity=0.426 Sum_probs=73.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..+.|.+.+. ...+|||++.++ .+++|..|.+||||+++| |++||+|++|||+++.++++.+++.+|+
T Consensus 15 ~~~~v~l~~~--~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 15 ETYNVELVRK--DGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp EEEEEEECCC--TTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred cEEEEEEEeC--CCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567888775 567999999862 479999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCC
Q psy12108 588 DAGKCLSLKLVTPMH 602 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~ 602 (665)
..+..|.|+|.+...
T Consensus 93 ~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 93 NAGQVVHLTLVRRKT 107 (129)
T ss_dssp HCCSSEEEEEEEESS
T ss_pred cCCCeEEEEEEeCCc
Confidence 988899999998654
No 132
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.22 E-value=4.1e-11 Score=103.61 Aligned_cols=76 Identities=21% Similarity=0.324 Sum_probs=67.4
Q ss_pred eeEEeccCCCCCcceeEEEEcC------------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD------------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~------------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
.+|++.++ .+|||++.|+ .+++|..|.|+|||++ ||++||+|++|||+++.++++.+++..++
T Consensus 5 ~~v~l~~~----~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKD----PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECS----SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCC----CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 45677764 2899999974 2799999999999999 99999999999999999999999999999
Q ss_pred hhCCceeEEEEcC
Q psy12108 588 DAGKCLSLKLVTP 600 (665)
Q Consensus 588 ~~g~~v~L~V~~~ 600 (665)
..+..+.|+|.+.
T Consensus 80 ~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 80 TFQNTVELIIVRE 92 (95)
T ss_dssp HCCSEEEEEEEEE
T ss_pred cCCCeEEEEEEeC
Confidence 8889999999875
No 133
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.22 E-value=2.1e-11 Score=105.61 Aligned_cols=80 Identities=25% Similarity=0.388 Sum_probs=64.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
.+|.|++.|++....+|||++.+. .+++|..|.+||||+++||++||+|++|||+++.+++++++.+++++ ..
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~--~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS--SE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--Ce
Confidence 468899999742235899998852 37999999999999999999999999999999999999999999975 45
Q ss_pred eeEEEEc
Q psy12108 593 LSLKLVT 599 (665)
Q Consensus 593 v~L~V~~ 599 (665)
++++|..
T Consensus 84 l~ltV~~ 90 (94)
T 3kzd_A 84 LGLLVRT 90 (94)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6666643
No 134
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.21 E-value=4.7e-11 Score=103.28 Aligned_cols=79 Identities=20% Similarity=0.432 Sum_probs=69.8
Q ss_pred eeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
.+|++.++ ..+|||++.+. .+++|..|.+||||+++| |++||+|++|||.++.++++.+++.+++..|
T Consensus 6 ~~v~l~~~---~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (97)
T 2iwn_A 6 FDVELTKN---VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 82 (97)
T ss_dssp EEEEEECB---TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred EEEEEecC---CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34667764 56899999876 389999999999999999 9999999999999999999999999999888
Q ss_pred CceeEEEEcCC
Q psy12108 591 KCLSLKLVTPM 601 (665)
Q Consensus 591 ~~v~L~V~~~~ 601 (665)
..+.|+|.+..
T Consensus 83 ~~v~l~v~r~g 93 (97)
T 2iwn_A 83 QTVLLTLMRRG 93 (97)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEeCC
Confidence 89999998754
No 135
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.21 E-value=3e-11 Score=118.46 Aligned_cols=83 Identities=30% Similarity=0.453 Sum_probs=74.9
Q ss_pred ccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
..++.|.+.|+ ...+|||++.|+ .+++|..|.+||||+++||++||+|++|||.+|.++++.+++.+|+. |..
T Consensus 83 ~~~~~v~l~k~--~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~ 159 (192)
T 3k1r_A 83 RKLKEVRLDRL--HPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKT 159 (192)
T ss_dssp SSCEEEEEETT--STTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSE
T ss_pred CceEEEEEEeC--CCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCe
Confidence 35788999997 467999999876 38999999999999999999999999999999999999999999999 899
Q ss_pred eeEEEEcCCC
Q psy12108 593 LSLKLVTPMH 602 (665)
Q Consensus 593 v~L~V~~~~~ 602 (665)
|.|+|.+.+.
T Consensus 160 v~l~v~r~g~ 169 (192)
T 3k1r_A 160 VSIKVRHIGL 169 (192)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEECCc
Confidence 9999988654
No 136
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.20 E-value=6.2e-11 Score=108.28 Aligned_cols=83 Identities=24% Similarity=0.383 Sum_probs=72.9
Q ss_pred cccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh-CC
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GK 591 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~ 591 (665)
...+|+|++.++ ..||||.+.++. +++|..|.++|||+++||++||+|++|||.++.++++.++..+|+.. +.
T Consensus 7 ~~~~r~v~l~~~---~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 7 MLRPRLCTMKKG---PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp TCCCEEEEEECC---SSSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred CCCcEEEEEecC---CCcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 346899999996 459999998765 89999999999999999999999999999999999999999999987 44
Q ss_pred ceeEEEEcCC
Q psy12108 592 CLSLKLVTPM 601 (665)
Q Consensus 592 ~v~L~V~~~~ 601 (665)
.+.|+|.+.+
T Consensus 84 ~~~l~v~R~g 93 (128)
T 2kjd_A 84 TKLLVVDRET 93 (128)
T ss_dssp EEEEEECHHH
T ss_pred EEEEEEEeCC
Confidence 6778887654
No 137
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=2.1e-11 Score=108.85 Aligned_cols=83 Identities=25% Similarity=0.496 Sum_probs=74.6
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
...+|.|++.|+ ..+|||++.++ .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..+.
T Consensus 13 ~~~~~~v~l~k~---~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~ 89 (113)
T 1um7_A 13 AREPRKIILHKG---STGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQ 89 (113)
T ss_dssp CCSEEEEEEECC---SSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCS
T ss_pred CCceEEEEEEEC---CCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 457899999995 46999999876 489999999999999999 99999999999999999999999999998888
Q ss_pred ceeEEEEcCC
Q psy12108 592 CLSLKLVTPM 601 (665)
Q Consensus 592 ~v~L~V~~~~ 601 (665)
.+.|+|.+..
T Consensus 90 ~v~l~v~r~~ 99 (113)
T 1um7_A 90 SVTIVAQYRP 99 (113)
T ss_dssp EEEEEEECCH
T ss_pred cEEEEEEECc
Confidence 9999998653
No 138
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=5.7e-11 Score=104.00 Aligned_cols=84 Identities=33% Similarity=0.540 Sum_probs=71.0
Q ss_pred cccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 516 WTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 516 ~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
...+|+|.+.+.. ...+|||++.+. .+++|..|.+++||+++||++||+|++|||+++.++++.+++..++. +.
T Consensus 6 ~~~~~~v~l~~~~-~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~ 83 (101)
T 1uez_A 6 SGEVRLVSLRRAK-AHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALKG-SK 83 (101)
T ss_dssp SCCCEEECCCCCC-TTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSSS-SS
T ss_pred CCccEEEEEEECC-CCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhcC-CC
Confidence 3467888888743 467999999876 38999999999999999999999999999999999998887777655 56
Q ss_pred ceeEEEEcCC
Q psy12108 592 CLSLKLVTPM 601 (665)
Q Consensus 592 ~v~L~V~~~~ 601 (665)
.+.|+|.+..
T Consensus 84 ~v~l~v~R~g 93 (101)
T 1uez_A 84 KLVLSVYSAG 93 (101)
T ss_dssp SCCEEECCCC
T ss_pred eEEEEEEECC
Confidence 8999997654
No 139
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.18 E-value=5.9e-11 Score=104.27 Aligned_cols=78 Identities=21% Similarity=0.313 Sum_probs=69.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcC------------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD------------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQL 585 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~------------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ 585 (665)
...+|++.++ .+|||++.++ .+++|..|.++|||++ ||++||+|++|||+++.++++.+++..
T Consensus 11 ~~~~v~l~~~----~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 11 QEIRVRVEKD----PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCEEEEEECS----SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEccC----CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456777774 3899999973 2799999999999999 999999999999999999999999999
Q ss_pred HHhhCCceeEEEEcC
Q psy12108 586 IKDAGKCLSLKLVTP 600 (665)
Q Consensus 586 ik~~g~~v~L~V~~~ 600 (665)
++..|..++|+|.+.
T Consensus 86 ~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 86 LKTFQNTVELIIVRE 100 (103)
T ss_dssp HHHCCSEEEEEEECC
T ss_pred hhcCCCeEEEEEEec
Confidence 998899999999875
No 140
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=2.9e-11 Score=104.54 Aligned_cols=79 Identities=27% Similarity=0.425 Sum_probs=68.3
Q ss_pred EEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 522 IQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 522 v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
+.+.+. ...+|||++.++. +++|..|.++|||+++||++||+|++|||+++.++++.++..+++..+..+.|+|
T Consensus 8 ~~~~~~--~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 85 (94)
T 1vb7_A 8 LTVDVA--GPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQL 85 (94)
T ss_dssp EEEEEC--SSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEE
T ss_pred EEEEec--CCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEE
Confidence 444443 3568999998743 7899999999999999999999999999999999999999999998888899999
Q ss_pred EcCCC
Q psy12108 598 VTPMH 602 (665)
Q Consensus 598 ~~~~~ 602 (665)
.+...
T Consensus 86 ~R~g~ 90 (94)
T 1vb7_A 86 DRSSG 90 (94)
T ss_dssp ECCCC
T ss_pred EECCc
Confidence 88653
No 141
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.17 E-value=8.4e-11 Score=102.69 Aligned_cols=78 Identities=27% Similarity=0.467 Sum_probs=67.1
Q ss_pred eeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh---CCceeE
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA---GKCLSL 595 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~---g~~v~L 595 (665)
+.+.+.+ ...+|||.+... .+++|..|.+||||++|||++||+|++|||.+|...++++++..|+.+ |..|.|
T Consensus 19 ~~l~l~~---~~~g~G~~l~~~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~L 95 (101)
T 3qik_A 19 KRLLILP---QEEDYGFDIEEKNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRL 95 (101)
T ss_dssp EEEEECC---CSSSSSEEEEEETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEe---CCCcccEEEEccCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEE
Confidence 4466776 356999998754 478899999999999999999999999999999888899999999974 889999
Q ss_pred EEEcC
Q psy12108 596 KLVTP 600 (665)
Q Consensus 596 ~V~~~ 600 (665)
.|...
T Consensus 96 LV~~~ 100 (101)
T 3qik_A 96 LVATK 100 (101)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98753
No 142
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.6e-10 Score=100.53 Aligned_cols=81 Identities=26% Similarity=0.408 Sum_probs=69.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC-CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA-PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~-~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v 593 (665)
...++|++.++ ..||||++.+.. +++|..|.++ |+++||++||+|++|||+++.+++|.+++++|+.. |+.|
T Consensus 9 ~~~~~v~l~~~---~~g~G~~i~~~~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 83 (96)
T 1ujv_A 9 AELMTLTIVKG---AQGFGFTIADSPTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSET 83 (96)
T ss_dssp CCCEEEEEECC---SSSSSEEEEEETTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEE
T ss_pred ceEEEEEEEeC---CCceeEEEEcCCCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEE
Confidence 34677889985 569999998654 7899999983 77899999999999999999999999999999985 7799
Q ss_pred eEEEEcCCC
Q psy12108 594 SLKLVTPMH 602 (665)
Q Consensus 594 ~L~V~~~~~ 602 (665)
.|+|.+...
T Consensus 84 ~l~v~R~g~ 92 (96)
T 1ujv_A 84 SLIIHRGSG 92 (96)
T ss_dssp EEEEECCSS
T ss_pred EEEEEECCC
Confidence 999988643
No 143
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=5e-11 Score=104.37 Aligned_cols=82 Identities=24% Similarity=0.396 Sum_probs=69.7
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
..+.+.+.+. ...+|||++.++. +++|..|.|+|||+++ ||++||+|++|||+++.++ +.+++.+++..+..
T Consensus 9 ~~~~~~v~~~--~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~ 85 (100)
T 2edp_A 9 SFQYVPVQLQ--GGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRI 85 (100)
T ss_dssp CCEEEEEECC--SCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSS
T ss_pred CcEEEEEEEC--CCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCe
Confidence 3455666654 3468999998742 6899999999999998 9999999999999999987 89999999988889
Q ss_pred eeEEEEcCCC
Q psy12108 593 LSLKLVTPMH 602 (665)
Q Consensus 593 v~L~V~~~~~ 602 (665)
+.|+|.+...
T Consensus 86 v~l~v~R~~~ 95 (100)
T 2edp_A 86 LKLIVRRRNS 95 (100)
T ss_dssp CEEEEEECCC
T ss_pred EEEEEEeCCC
Confidence 9999988754
No 144
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.17 E-value=1.3e-10 Score=104.08 Aligned_cols=84 Identities=23% Similarity=0.419 Sum_probs=72.4
Q ss_pred cccccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 514 HHWTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 514 ~~~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
.+...+|+|.+.+. ...+|||++.++ .+++|..|.+++||+++||++||+|++|||+++.++++.+++.+++..
T Consensus 11 ~~~~~~~~v~~~~~--~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 11 NRENKEKKVFISLV--GSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp CCCCSSEEEEECCC--SSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred CCCCCcEEEEEEEc--CCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 34445688888776 567999999865 389999999999999999999999999999999999988999999874
Q ss_pred CCceeEEEEcC
Q psy12108 590 GKCLSLKLVTP 600 (665)
Q Consensus 590 g~~v~L~V~~~ 600 (665)
..+.|+|.+.
T Consensus 89 -~~v~l~v~r~ 98 (114)
T 1x5n_A 89 -RSLTISIVAA 98 (114)
T ss_dssp -SSEEEEECSS
T ss_pred -CeEEEEEEcC
Confidence 6899999876
No 145
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.15 E-value=1.8e-10 Score=102.63 Aligned_cols=82 Identities=22% Similarity=0.405 Sum_probs=72.2
Q ss_pred eeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCC-CCCCEEEEECCEecCCCChHHHHHHHHhh-CCcee
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGM-KDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GKCLS 594 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGL-k~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~v~ 594 (665)
.+|.+.++ ...+|||.+.+.. +++|..|.+||||+++|| ++||+|++|||.++.++++.++..+++.. |..+.
T Consensus 3 ~~v~l~~~--~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 80 (112)
T 1qau_A 3 ISVRLFKR--KVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 80 (112)
T ss_dssp EEEEEECB--TTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEE
T ss_pred EEEEEEcC--CCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEE
Confidence 45788887 5789999998754 899999999999999998 99999999999999998999999999875 67899
Q ss_pred EEEEcCCCC
Q psy12108 595 LKLVTPMHK 603 (665)
Q Consensus 595 L~V~~~~~~ 603 (665)
|+|.+.+..
T Consensus 81 l~v~R~g~~ 89 (112)
T 1qau_A 81 VLILRGPEG 89 (112)
T ss_dssp EEEEECCTT
T ss_pred EEEEeCCcc
Confidence 999986543
No 146
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.15 E-value=7.2e-11 Score=117.93 Aligned_cols=80 Identities=26% Similarity=0.423 Sum_probs=71.8
Q ss_pred ccceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 517 TAPRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 517 ~~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
..+|.|+|.++ ..||||.+.++. +++|..|.+||||+++||++||+|++|||++|.++++.+++.+|+..|..|
T Consensus 8 ~~~r~v~l~k~---~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v 84 (216)
T 2krg_A 8 LRPRLCTMKKG---PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDET 84 (216)
T ss_dssp CCCEEEEEECC---SSSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEE
T ss_pred cceEEEEEEeC---CCCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 46789999995 459999999876 899999999999999999999999999999999999999999999888888
Q ss_pred -eEEEEc
Q psy12108 594 -SLKLVT 599 (665)
Q Consensus 594 -~L~V~~ 599 (665)
.|+|.+
T Consensus 85 ~~l~V~R 91 (216)
T 2krg_A 85 KLLVVDR 91 (216)
T ss_dssp EEEECCH
T ss_pred EEEEEEE
Confidence 777754
No 147
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=7.9e-11 Score=107.73 Aligned_cols=80 Identities=19% Similarity=0.333 Sum_probs=70.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh--hCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v 593 (665)
....+.+.++ ..||||++.+. .+++|..|.+||||+++| |++||+|++|||.+|.+.+|.+++.+|+. .|..|
T Consensus 27 ~~~~~~l~k~---~~glG~~i~~~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v 103 (126)
T 1wif_A 27 KVIQTKLTVG---NLGLGLVVIQNGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVL 103 (126)
T ss_dssp CEEEEEEECC---TTCCCCCEEEETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEE
T ss_pred ceEEEEEecC---CceEeEEEEcCCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEE
Confidence 4456778884 56999998864 468899999999999999 99999999999999999999999999997 37899
Q ss_pred eEEEEcC
Q psy12108 594 SLKLVTP 600 (665)
Q Consensus 594 ~L~V~~~ 600 (665)
+|+|.+.
T Consensus 104 ~l~V~R~ 110 (126)
T 1wif_A 104 QIKAYRG 110 (126)
T ss_dssp EEEEESS
T ss_pred EEEEEEC
Confidence 9999886
No 148
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.13 E-value=1.6e-10 Score=113.60 Aligned_cols=85 Identities=21% Similarity=0.427 Sum_probs=76.5
Q ss_pred ccccceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhc-CCCCCCEEEEECCEecCCCChHHHHHHHHhh
Q psy12108 515 HWTAPRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFG-GMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA 589 (665)
Q Consensus 515 ~~~~~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~a-GLk~GD~Il~VnG~~v~~~~~~evv~~ik~~ 589 (665)
.|..++.|.+.+. +..+|||++.++. +++|..|.+||||+++ ||++||+|++|||+++.+++|.+++.+++..
T Consensus 4 ~~~~~~~v~l~~~--~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (200)
T 2qt5_A 4 SFKGSTVVELMKK--EGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV 81 (200)
T ss_dssp CCEEEEEEEEECC--TTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred ccCCCEEEEEEeC--CCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4667888999987 6789999998763 6899999999999998 9999999999999999999999999999988
Q ss_pred CCceeEEEEcCC
Q psy12108 590 GKCLSLKLVTPM 601 (665)
Q Consensus 590 g~~v~L~V~~~~ 601 (665)
|..|.|+|.+..
T Consensus 82 g~~v~l~v~R~~ 93 (200)
T 2qt5_A 82 GERVVLEVEYEL 93 (200)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEeccC
Confidence 999999998754
No 149
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=8.6e-10 Score=100.80 Aligned_cols=84 Identities=26% Similarity=0.410 Sum_probs=71.5
Q ss_pred cceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
.++++.+..+ ...+|||++.++ .+++|..|.+||||+++||++||+|++|||+++.++++.+++..++. +..+
T Consensus 20 ~~~~v~v~~~--~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v 96 (128)
T 1uf1_A 20 DEKKVNLVLG--DGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHL 96 (128)
T ss_dssp SEEEEEEECC--SSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEE
T ss_pred cEEEEEEEEC--CCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeE
Confidence 4567777765 346899999874 38999999999999999999999999999999999999899998887 5689
Q ss_pred eEEEEcCCCCC
Q psy12108 594 SLKLVTPMHKN 604 (665)
Q Consensus 594 ~L~V~~~~~~~ 604 (665)
.|+|.+.+...
T Consensus 97 ~l~v~R~g~~~ 107 (128)
T 1uf1_A 97 ILTVKDVGRLP 107 (128)
T ss_dssp EEEEECCSCCS
T ss_pred EEEEEECCccc
Confidence 99999866543
No 150
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.11 E-value=2.1e-10 Score=111.60 Aligned_cols=81 Identities=26% Similarity=0.493 Sum_probs=73.0
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..+.|++.|+ ..+|||++.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.+++.+++
T Consensus 5 ~~~~v~l~~~---~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 5 EYEEITLERG---NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp EEEEEEEECB---TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEEEEC---CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3567999995 45899999975 379999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCC
Q psy12108 588 DAGKCLSLKLVTPM 601 (665)
Q Consensus 588 ~~g~~v~L~V~~~~ 601 (665)
..|..+.|+|.+..
T Consensus 82 ~~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 82 EAGSIVRLYVMRRK 95 (196)
T ss_dssp TSCSEEEEEEEEEC
T ss_pred hCCCcEEEEEEecC
Confidence 99999999998754
No 151
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.10 E-value=3.3e-10 Score=103.30 Aligned_cols=71 Identities=24% Similarity=0.340 Sum_probs=63.5
Q ss_pred CcceeEEEEcC--CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCC
Q psy12108 531 DTGFGFSVRGD--APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPM 601 (665)
Q Consensus 531 ~~g~Gf~l~g~--~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~ 601 (665)
..+|||.+.++ .+++|..|.|+|||+++||++||+|++|||++|.++++.+++..|+. .|..++|+|.+..
T Consensus 38 ~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 38 GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 35899999864 48999999999999999999999999999999999999999998885 5788999998754
No 152
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=8.5e-11 Score=103.39 Aligned_cols=80 Identities=25% Similarity=0.382 Sum_probs=69.0
Q ss_pred ceeEEeccCCCCCcceeEEEEcCC----CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCcee
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGDA----PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLS 594 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~~----~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~ 594 (665)
.++|.+.. ..+|||++.++. +++|..|.++|||+++||++||+|++|||+++.++++.++..+|+..+..+.
T Consensus 6 ~~~v~~~~----~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 81 (103)
T 1v5l_A 6 SGNVVLPG----PAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLC 81 (103)
T ss_dssp CBCCEEES----SSCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEE
T ss_pred EEEEEEcC----CCCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 44555543 348999988653 7899999999999999999999999999999999999999999998888999
Q ss_pred EEEEcCCC
Q psy12108 595 LKLVTPMH 602 (665)
Q Consensus 595 L~V~~~~~ 602 (665)
|+|.+...
T Consensus 82 l~v~R~g~ 89 (103)
T 1v5l_A 82 LKIDRAET 89 (103)
T ss_dssp CEECCCTT
T ss_pred EEEEECCe
Confidence 99988654
No 153
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.09 E-value=2.7e-10 Score=100.07 Aligned_cols=68 Identities=22% Similarity=0.406 Sum_probs=60.6
Q ss_pred cceeEEEEcC----------------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh-CCcee
Q psy12108 532 TGFGFSVRGD----------------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GKCLS 594 (665)
Q Consensus 532 ~g~Gf~l~g~----------------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~v~ 594 (665)
.+|||++.|+ .+++|..|.++|||+++||++||+|++|||.++.+++|++++..++.. |..+.
T Consensus 19 ~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 98 (104)
T 3sfj_A 19 LILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVR 98 (104)
T ss_dssp EECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEE
T ss_pred CcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 4799999943 258999999999999999999999999999999999999999999864 67899
Q ss_pred EEEEc
Q psy12108 595 LKLVT 599 (665)
Q Consensus 595 L~V~~ 599 (665)
|+|.+
T Consensus 99 l~v~R 103 (104)
T 3sfj_A 99 LLVTR 103 (104)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98875
No 154
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.09 E-value=3.5e-10 Score=96.67 Aligned_cols=79 Identities=23% Similarity=0.379 Sum_probs=65.4
Q ss_pred EEeccCCCCCcceeEEEEc-CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEE
Q psy12108 522 IQLQRANNSDTGFGFSVRG-DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLV 598 (665)
Q Consensus 522 v~l~rg~~~~~g~Gf~l~g-~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~ 598 (665)
+.+.+.+....++||++.. ..+++|..|.|||||+++||++||+|++|||.++.+.++.++..+++. .|..+.|+|.
T Consensus 7 ~~~~~~~~~~~~lG~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 86 (90)
T 2eaq_A 7 ISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVR 86 (90)
T ss_dssp EEEECCTTCSSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEE
T ss_pred EEEEecCCCCCcccEEEEecCCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 4555543234579999864 348999999999999999999999999999999987788999999985 4788999997
Q ss_pred cC
Q psy12108 599 TP 600 (665)
Q Consensus 599 ~~ 600 (665)
+.
T Consensus 87 R~ 88 (90)
T 2eaq_A 87 RY 88 (90)
T ss_dssp EE
T ss_pred eC
Confidence 64
No 155
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.09 E-value=2.4e-10 Score=106.34 Aligned_cols=87 Identities=17% Similarity=0.361 Sum_probs=70.4
Q ss_pred cceeEEeccCCC-CCcceeEEEEcC----------------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChH
Q psy12108 518 APRSIQLQRANN-SDTGFGFSVRGD----------------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHE 580 (665)
Q Consensus 518 ~~r~v~l~rg~~-~~~g~Gf~l~g~----------------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~ 580 (665)
..|.|.|.+... ...+|||++.++ .+++|..|.+||||+++||++||+|++|||+++.++++.
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~ 102 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHD 102 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHH
Confidence 346677776311 124799998652 489999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-CCceeEEEEcCCCCC
Q psy12108 581 EVVQLIKDA-GKCLSLKLVTPMHKN 604 (665)
Q Consensus 581 evv~~ik~~-g~~v~L~V~~~~~~~ 604 (665)
+++.+|+.. |..|.|+|.+.+...
T Consensus 103 ~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 103 QARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp HHHHHHCCTTCSEEEEEEEECC---
T ss_pred HHHHHHHhCCCCEEEEEEEECCEEE
Confidence 999999974 678999999876543
No 156
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=1.5e-10 Score=104.14 Aligned_cols=81 Identities=25% Similarity=0.360 Sum_probs=69.0
Q ss_pred cceeEEeccCCCCC-cceeEEEEcC-----CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC
Q psy12108 518 APRSIQLQRANNSD-TGFGFSVRGD-----APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK 591 (665)
Q Consensus 518 ~~r~v~l~rg~~~~-~g~Gf~l~g~-----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~ 591 (665)
.+|.|+|.|+.. . .+|||++.+. .+++|..|.++|||+++||++||+|++|||++|.++++.+++.+++. .
T Consensus 15 ~~~~v~l~k~~~-~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~ 91 (114)
T 2d8i_A 15 VTQSIHIEKSDT-AADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--P 91 (114)
T ss_dssp EEEEEEEECSCT-TTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS--S
T ss_pred ceEEEEEEeCCC-CccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC--C
Confidence 568899999731 2 3799998752 37899999999999999999999999999999999999999999985 4
Q ss_pred ceeEEEEcCC
Q psy12108 592 CLSLKLVTPM 601 (665)
Q Consensus 592 ~v~L~V~~~~ 601 (665)
.+.|+|.+..
T Consensus 92 ~v~l~v~R~p 101 (114)
T 2d8i_A 92 SLGLLVRTYP 101 (114)
T ss_dssp EEEEEEEECC
T ss_pred cEEEEEEECC
Confidence 8889888753
No 157
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.07 E-value=2.8e-10 Score=103.86 Aligned_cols=84 Identities=21% Similarity=0.387 Sum_probs=74.4
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC---CeEEEEeCCCChhhhcCC-CCCCEEEEECCEecCCCChHHHHHHHHhh-CCc
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA---PVIVASVDSGSLAQFGGM-KDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GKC 592 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~---~v~V~~V~pgspA~~aGL-k~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~ 592 (665)
.++.|.+.++ ...+|||++.+.. +++|..|.+||||+++|| ++||+|++|||+++.++++.++.++|+.. |..
T Consensus 8 ~~~~v~l~~~--~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~ 85 (127)
T 1b8q_A 8 NVISVRLFKR--KVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASET 85 (127)
T ss_dssp CSEEEEEECT--TTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSC
T ss_pred ceEEEEEEeC--CCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 4788999997 5679999998653 799999999999999998 99999999999999999999999999875 678
Q ss_pred eeEEEEcCCCC
Q psy12108 593 LSLKLVTPMHK 603 (665)
Q Consensus 593 v~L~V~~~~~~ 603 (665)
+.|+|.+.+..
T Consensus 86 v~l~v~R~g~~ 96 (127)
T 1b8q_A 86 HVVLILRGPEG 96 (127)
T ss_dssp EEEEEECCCCS
T ss_pred EEEEEEeCCce
Confidence 99999987643
No 158
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.06 E-value=7.9e-10 Score=94.66 Aligned_cols=81 Identities=17% Similarity=0.346 Sum_probs=66.4
Q ss_pred ceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
+..|.+.+.. ....|||.+. .+++|..|.+||||+++| |++||+|++|||.++.++++.++..+++..+..+.|+|
T Consensus 3 ~~~v~~~~~~-~~~~~g~~~~--~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 79 (92)
T 3cyy_A 3 PTKVTLVKSA-KNEEYGLRLA--SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVV 79 (92)
T ss_dssp CEEEEEECSS-TTSCCCEEEE--EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEE
T ss_pred cEEEEEEeCC-CCCCCCEEEe--CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEE
Confidence 3345555432 2468999876 479999999999999999 99999999999999999999999999998877899999
Q ss_pred EcCCC
Q psy12108 598 VTPMH 602 (665)
Q Consensus 598 ~~~~~ 602 (665)
.+.+.
T Consensus 80 ~r~g~ 84 (92)
T 3cyy_A 80 QRDER 84 (92)
T ss_dssp EC---
T ss_pred EeCCc
Confidence 87653
No 159
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.03 E-value=4.9e-10 Score=109.87 Aligned_cols=83 Identities=25% Similarity=0.414 Sum_probs=74.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHh
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKD 588 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~ 588 (665)
..++|.+.|+ ...||||++.++ .+++|..|.|||||+++| |++||+|++|||+++.++++.++..+|+.
T Consensus 6 ~~~~v~l~~~--~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 6 ETTEVVLTAD--PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp EEEEEEEECB--TTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred EEEEEEEEeC--CCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567899998 568999999986 268999999999999999 99999999999999999899999999998
Q ss_pred h--CCceeEEEEcCCC
Q psy12108 589 A--GKCLSLKLVTPMH 602 (665)
Q Consensus 589 ~--g~~v~L~V~~~~~ 602 (665)
. |..++|+|.+...
T Consensus 84 ~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 84 SSITSKVTLEIEFDVA 99 (196)
T ss_dssp CCSSSEEEEEEEECSC
T ss_pred CCCCCeEEEEEEecCC
Confidence 7 7789999987654
No 160
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.03 E-value=1.1e-09 Score=107.73 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=73.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcCC------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCC--CChHHHHHHHHh
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDA------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKW--SPHEEVVQLIKD 588 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~--~~~~evv~~ik~ 588 (665)
....|.+.++ ..+|||++.++. +++|..|.+||||+++| |++||+|++|||+++.+ ++|.+++.+++.
T Consensus 18 ~~~~v~~~~~---~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 94 (206)
T 3r0h_A 18 KKILIELKVE---KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT 94 (206)
T ss_dssp SCEEEEEECT---TSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS
T ss_pred CEEEEEEEeC---CCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh
Confidence 4567889884 569999998752 78999999999999988 99999999999999999 899999999999
Q ss_pred hCCc-eeEEEEcCCCC
Q psy12108 589 AGKC-LSLKLVTPMHK 603 (665)
Q Consensus 589 ~g~~-v~L~V~~~~~~ 603 (665)
.+.. +.|+|.+....
T Consensus 95 ~~~~~v~l~v~R~~~~ 110 (206)
T 3r0h_A 95 TYEKAVTLTVFRADPP 110 (206)
T ss_dssp CCSSEEEEEEECCSSC
T ss_pred cCCCceEEEEEecccC
Confidence 8887 99999986543
No 161
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.03 E-value=9.8e-10 Score=128.39 Aligned_cols=93 Identities=23% Similarity=0.406 Sum_probs=78.6
Q ss_pred ccccccc-ccccccceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEec
Q psy12108 506 PVAIFSA-KHHWTAPRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDV 574 (665)
Q Consensus 506 P~svf~~-~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v 574 (665)
|++.+.. ......+++|.|.|+ .+||||+|.|+ .+++|..|.|||||+++| |++||+|++|||+++
T Consensus 46 ~~s~~~~~~~~~~~~~~v~l~k~---~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v 122 (721)
T 2xkx_A 46 EAPGYVNGTEGEMEYEEITLERG---NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDV 122 (721)
T ss_pred CcccccCCCCCCceEEEEEEEeC---CCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEEC
Confidence 5555533 122335688999996 45999999984 368999999999999999 999999999999999
Q ss_pred CCCChHHHHHHHHhhCCceeEEEEcCC
Q psy12108 575 KWSPHEEVVQLIKDAGKCLSLKLVTPM 601 (665)
Q Consensus 575 ~~~~~~evv~~ik~~g~~v~L~V~~~~ 601 (665)
.+++|.+++.+|+..|..|.|+|.+..
T Consensus 123 ~~~~~~~~~~~l~~~g~~v~l~v~R~~ 149 (721)
T 2xkx_A 123 REVTHSAAVEALKEAGSIVRLYVMRRK 149 (721)
T ss_pred CCCCHHHHHHHhhccccccceEEEecc
Confidence 999999999999998999999998664
No 162
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.01 E-value=1.4e-09 Score=90.56 Aligned_cols=69 Identities=17% Similarity=0.332 Sum_probs=61.1
Q ss_pred CCcceeEEEEcCCCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcC
Q psy12108 530 SDTGFGFSVRGDAPVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTP 600 (665)
Q Consensus 530 ~~~g~Gf~l~g~~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~ 600 (665)
....|||.+. .+++|..|.++|||+++| |++||+|++|||.++.++++.++..+++..+..+.|+|.+.
T Consensus 11 ~~~~~g~~~~--~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 11 KNEEYGLRLA--SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp TTCCCCEEEE--EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCCCEEEe--CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 3567899876 469999999999999999 99999999999999999999999999998777888888753
No 163
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.00 E-value=1.1e-09 Score=107.82 Aligned_cols=83 Identities=17% Similarity=0.309 Sum_probs=71.3
Q ss_pred eeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
.++.+.+. ...++||++.+. .+++|..|.+||||+++| |++||+|++|||++|.++++.+++.+++..+..+.|+|
T Consensus 115 ~~v~l~~~--~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V 192 (206)
T 3r0h_A 115 FNVDLMKK--AGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV 192 (206)
T ss_dssp EEEEEECC--TTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEEecC--CCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 44566664 346899998764 489999999999999998 99999999999999999999999999999888999999
Q ss_pred EcCCCCC
Q psy12108 598 VTPMHKN 604 (665)
Q Consensus 598 ~~~~~~~ 604 (665)
.++....
T Consensus 193 ~R~~~~~ 199 (206)
T 3r0h_A 193 TRPKPTL 199 (206)
T ss_dssp EEECCCC
T ss_pred EeCCCCC
Confidence 9865444
No 164
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.00 E-value=8.9e-10 Score=107.66 Aligned_cols=67 Identities=24% Similarity=0.330 Sum_probs=63.0
Q ss_pred cceeEEEEcC------------CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEc
Q psy12108 532 TGFGFSVRGD------------APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVT 599 (665)
Q Consensus 532 ~g~Gf~l~g~------------~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~ 599 (665)
.||||+|.|+ .|++|..|.|||||++ ||++||+|++|||+++.+++|.+++..++..+..|.|+|.+
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4899999985 3899999999999999 99999999999999999999999999999998899999998
No 165
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.99 E-value=1.4e-09 Score=103.74 Aligned_cols=81 Identities=20% Similarity=0.364 Sum_probs=70.3
Q ss_pred cceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh-CCceeE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GKCLSL 595 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~v~L 595 (665)
.+|.|++.|+ ..+++||.+.+. .+++|..|.|||||+++||++||+|++|||+++.+++++.+..+++.. |..++|
T Consensus 4 ~~r~v~l~k~--~~~~lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l 81 (166)
T 1w9e_A 4 DPREVILCKD--QDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITM 81 (166)
T ss_dssp CCEEEEEECC--TTSCCSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEE
T ss_pred CCEEEEEEeC--CCCcEeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEE
Confidence 5799999998 678999998864 479999999999999999999999999999999999876777888765 568999
Q ss_pred EEEcC
Q psy12108 596 KLVTP 600 (665)
Q Consensus 596 ~V~~~ 600 (665)
+|.+.
T Consensus 82 ~vr~~ 86 (166)
T 1w9e_A 82 TIRDR 86 (166)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99543
No 166
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.98 E-value=8.2e-10 Score=121.89 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=71.1
Q ss_pred ceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCcee
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLS 594 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~ 594 (665)
+|.|++.++ .+|||++.|+ .|++|..|.+||||+++||++||+|++|||+++.++++.+++.+|+. .|+.|+
T Consensus 2 ~r~V~l~k~----~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~ 77 (468)
T 3shw_A 2 MKLVKFRKG----DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 77 (468)
T ss_dssp EEEEEEECC----SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEE
T ss_pred ceEEEEecC----CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 688999985 4899999875 48999999999999999999999999999999999999999999998 688999
Q ss_pred EEEEcC
Q psy12108 595 LKLVTP 600 (665)
Q Consensus 595 L~V~~~ 600 (665)
|+|.+.
T Consensus 78 L~V~r~ 83 (468)
T 3shw_A 78 ILAQKK 83 (468)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999864
No 167
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.97 E-value=1.4e-09 Score=105.85 Aligned_cols=82 Identities=27% Similarity=0.441 Sum_probs=71.5
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHH
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIK 587 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik 587 (665)
..+++.+.+.+ .++||++.+. .+++|..|.|||||+++| |++||+|++|||++|.++++.+++.+|+
T Consensus 100 ~~~~v~l~~~~---~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 176 (196)
T 3gsl_A 100 KVMEIKLIKGP---KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 176 (196)
T ss_dssp EEEEEEEEEBT---TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHH
T ss_pred ccEEEEEecCC---CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHH
Confidence 34567777753 4899999853 368999999999999999 9999999999999999999999999999
Q ss_pred hhCCceeEEEEcCCC
Q psy12108 588 DAGKCLSLKLVTPMH 602 (665)
Q Consensus 588 ~~g~~v~L~V~~~~~ 602 (665)
..+..+.|+|.+...
T Consensus 177 ~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 177 NTYDVVYLKVAKPSN 191 (196)
T ss_dssp SCCEEEEEEEEEESC
T ss_pred cCCCeEEEEEeCCCC
Confidence 988899999988654
No 168
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.91 E-value=2.3e-09 Score=116.34 Aligned_cols=79 Identities=22% Similarity=0.356 Sum_probs=70.6
Q ss_pred cceeEEeccCCCCCcceeEEEEcC--CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD--APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~--~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v 593 (665)
.+|.|.+.++ +++||++.|+ .|++|..|.+||||+++||++||+|++|||.++.++++++++.+|++ .|+.|
T Consensus 9 ~~~~v~~~k~----~~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v 84 (391)
T 3tsz_A 9 SMKLVKFRKG----DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEV 84 (391)
T ss_dssp CEEEEEEECC----SSCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEE
T ss_pred CcEEEEeecC----CceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeE
Confidence 4677888875 3699999874 48999999999999999999999999999999999999999999996 68899
Q ss_pred eEEEEcC
Q psy12108 594 SLKLVTP 600 (665)
Q Consensus 594 ~L~V~~~ 600 (665)
+|+|.+.
T Consensus 85 ~l~v~r~ 91 (391)
T 3tsz_A 85 TILAQKK 91 (391)
T ss_dssp EEEEEEC
T ss_pred EEEEeeC
Confidence 9999864
No 169
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=7.3e-09 Score=94.15 Aligned_cols=81 Identities=28% Similarity=0.460 Sum_probs=67.7
Q ss_pred ceeEEeccCCCCCcceeEEEEcC------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhh-C
Q psy12108 519 PRSIQLQRANNSDTGFGFSVRGD------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-G 590 (665)
Q Consensus 519 ~r~v~l~rg~~~~~g~Gf~l~g~------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g 590 (665)
.+.+.+.+.. ...++||++... .+++|..|.++|||+++| |++||+|++|||++|. ++.++..+|+.. |
T Consensus 20 ~~~~~~~~~~-~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 96 (124)
T 1wh1_A 20 LEEVDLYRMN-SQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEEN 96 (124)
T ss_dssp ECCBCCCCSS-TTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSC
T ss_pred EEEEEEEecC-CCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCC
Confidence 3445566543 356899999864 479999999999999999 9999999999999997 578999999875 6
Q ss_pred CceeEEEEcCCC
Q psy12108 591 KCLSLKLVTPMH 602 (665)
Q Consensus 591 ~~v~L~V~~~~~ 602 (665)
..|.|+|.+...
T Consensus 97 ~~v~l~v~R~g~ 108 (124)
T 1wh1_A 97 KNFSLLIARPEL 108 (124)
T ss_dssp CSCCEEEEECSS
T ss_pred CEEEEEEEECCE
Confidence 789999998654
No 170
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.89 E-value=3.2e-09 Score=95.90 Aligned_cols=71 Identities=27% Similarity=0.287 Sum_probs=61.0
Q ss_pred ceeEEEEcC-----CCeEEEEeCC--CChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCCC
Q psy12108 533 GFGFSVRGD-----APVIVASVDS--GSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 533 g~Gf~l~g~-----~~v~V~~V~p--gspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~~ 603 (665)
||++.+... .+++|..|.+ ++||+++||++||+|++|||+++.++++.++..+|+..|..+.|+|.+....
T Consensus 30 G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 30 GFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVP 107 (118)
T ss_dssp SSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSC
T ss_pred eEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEE
Confidence 455555532 4789999999 9999999999999999999999999999999999998777899999876543
No 171
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.73 E-value=3.6e-08 Score=96.48 Aligned_cols=80 Identities=20% Similarity=0.421 Sum_probs=68.7
Q ss_pred eeEEeccCCCCCcceeEEEEcC------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCc
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKC 592 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~ 592 (665)
..+.+.+. ...++||++.+. .+++|..|.+||||+++| |++||+|++|||+++.++++.++.++|+..+..
T Consensus 109 ~~v~l~~~--~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 186 (196)
T 1p1d_A 109 FHVKLPKK--HSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDL 186 (196)
T ss_dssp EEEEECCC--SSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTC
T ss_pred EEEEecCC--CCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 44556543 345799998763 589999999999999999 999999999999999998899999999988889
Q ss_pred eeEEEEcCC
Q psy12108 593 LSLKLVTPM 601 (665)
Q Consensus 593 v~L~V~~~~ 601 (665)
+.|+|.+..
T Consensus 187 v~l~v~R~~ 195 (196)
T 1p1d_A 187 VKLKIRKDE 195 (196)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEeCC
Confidence 999998754
No 172
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.73 E-value=1.7e-08 Score=109.51 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=80.4
Q ss_pred hhhHHhhc-CcccccccccccccceeEEeccCCCCCcceeEEEEcC----CCeEEEEeCCCChhhhcCCCCCCEEEEECC
Q psy12108 497 VEDLFKQL-GPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD----APVIVASVDSGSLAQFGGMKDGDFIVAIGD 571 (665)
Q Consensus 497 v~d~f~~L-gP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~----~~v~V~~V~pgspA~~aGLk~GD~Il~VnG 571 (665)
..+|+..| +||+.+.....+...+. -..| ...|+|+.+... .+++|..|.+||||+++||++||+|++|||
T Consensus 53 i~~ml~~L~D~hs~~~~~~~~~~~~~--~~~g--~~~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing 128 (388)
T 1fc6_A 53 IRKMLAVLDDPFTRFLEPSRLAALRR--GTAG--SVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDG 128 (388)
T ss_dssp HHHHHHTTCCTTCEEECHHHHHHHHH--CSSS--SCBBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETT
T ss_pred HHHHHHhcCCCcceecCHHHHHHHHH--hhcC--ceEEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECC
Confidence 34577787 58887765544332221 1234 567899998753 589999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHhh-CCceeEEEEcCCC
Q psy12108 572 RDVKWSPHEEVVQLIKDA-GKCLSLKLVTPMH 602 (665)
Q Consensus 572 ~~v~~~~~~evv~~ik~~-g~~v~L~V~~~~~ 602 (665)
+++.+++..++..+|++. |..|+|+|.+.+.
T Consensus 129 ~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 129 TAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp EECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 999999889999999864 6789999987654
No 173
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.70 E-value=4.1e-08 Score=96.31 Aligned_cols=79 Identities=25% Similarity=0.506 Sum_probs=67.7
Q ss_pred eeEEeccCCCCCcceeEEEEcC--------CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhC
Q psy12108 520 RSIQLQRANNSDTGFGFSVRGD--------APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAG 590 (665)
Q Consensus 520 r~v~l~rg~~~~~g~Gf~l~g~--------~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g 590 (665)
..|.+.+. ..+|||.+.++ .+++|..|.++|||+++| |++||+|++|||+++.++++.+++++|+..+
T Consensus 108 ~~v~l~~~---~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 184 (200)
T 2qt5_A 108 VEVTLHKE---GNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 184 (200)
T ss_dssp EEEEEECB---TTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred EEEEEecC---CCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34555553 45899998753 378999999999999999 9999999999999999999999999999988
Q ss_pred CceeEEEEcCC
Q psy12108 591 KCLSLKLVTPM 601 (665)
Q Consensus 591 ~~v~L~V~~~~ 601 (665)
..+.|+|.+..
T Consensus 185 ~~v~l~v~R~~ 195 (200)
T 2qt5_A 185 QEATLLIEYDV 195 (200)
T ss_dssp SEEEEEEEEEE
T ss_pred CeEEEEEEECC
Confidence 89999998753
No 174
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.69 E-value=9.9e-09 Score=111.35 Aligned_cols=92 Identities=23% Similarity=0.283 Sum_probs=75.4
Q ss_pred cccccccccccccceeEEeccCCCCCcceeEEEEcCC------CeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCC
Q psy12108 506 PVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGDA------PVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSP 578 (665)
Q Consensus 506 P~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~~------~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~ 578 (665)
|+..|+... ..|.|.+.|. ..++|||++.+.. +++|..|.|||||+++| |++||+|++|||+++.+++
T Consensus 195 ~~~~~~~~~---~~~~V~i~k~--~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~ 269 (388)
T 3suz_A 195 DLIHFSNSE---NCKELQLEKH--KGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLP 269 (388)
T ss_dssp HHHHTCCSS---CCEEEEECCC--SSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCC
T ss_pred hhhhhcccc---cceEEEEECC--CCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCC
Confidence 444554443 3577999986 4679999988743 48999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhh--CCceeEEEEcCCC
Q psy12108 579 HEEVVQLIKDA--GKCLSLKLVTPMH 602 (665)
Q Consensus 579 ~~evv~~ik~~--g~~v~L~V~~~~~ 602 (665)
+.+++.+|+.. +..++|+|.+...
T Consensus 270 ~~~~~~~l~~~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 270 LATCQGIIKGLKNQTQVKLNIVSCPP 295 (388)
T ss_dssp STTHHHHTTTCTTCSCEEEEEEECCS
T ss_pred HHHHHHHHHhccCCCccccccccccc
Confidence 99999999986 4469999987543
No 175
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.67 E-value=4.6e-08 Score=114.29 Aligned_cols=81 Identities=26% Similarity=0.544 Sum_probs=72.8
Q ss_pred cceeEEeccCCCCCcceeEEEEcC---CCeEEEEeCCCChhhhcC-CCCCCEEEEECCEecCCCChHHHHHHHHhhCCce
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGD---APVIVASVDSGSLAQFGG-MKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCL 593 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~---~~v~V~~V~pgspA~~aG-Lk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v 593 (665)
.+|.|.+.++ ..+|||++.++ .+++|..|.+||||+++| |++||+|++|||++|.++++++++.+|+..+..|
T Consensus 307 ~~~~v~l~~~---~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v 383 (721)
T 2xkx_A 307 EPRRIVIHRG---STGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 383 (721)
T ss_pred ceEEEEEEEC---CCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 5788999985 45899999865 489999999999999999 9999999999999999999999999999988899
Q ss_pred eEEEEcCC
Q psy12108 594 SLKLVTPM 601 (665)
Q Consensus 594 ~L~V~~~~ 601 (665)
+|+|.+..
T Consensus 384 ~L~v~r~~ 391 (721)
T 2xkx_A 384 TIIAQYKP 391 (721)
T ss_pred EEEEEeCc
Confidence 99998643
No 176
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.44 E-value=4.1e-08 Score=106.52 Aligned_cols=81 Identities=25% Similarity=0.443 Sum_probs=1.3
Q ss_pred cceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
..+++.+.+.. ..+++||.+.++ +|..|.+||||+++||++||+|++|||++|.+++|.+++.+|+..+..+.|+|
T Consensus 295 ~~~~v~l~~~~-~~~~lG~~i~~g---~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V 370 (388)
T 3suz_A 295 PVTTVLIKRPD-LKYQLGFSVQNG---IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKT 370 (388)
T ss_dssp SCC-----------------------------------------------------------------------------
T ss_pred ccceeeEeecC-CCCccceEEecC---EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 34555553321 345799988764 89999999999999999999999999999999999999999999999999999
Q ss_pred EcCCC
Q psy12108 598 VTPMH 602 (665)
Q Consensus 598 ~~~~~ 602 (665)
++...
T Consensus 371 ~p~~~ 375 (388)
T 3suz_A 371 MPAAM 375 (388)
T ss_dssp -----
T ss_pred Eeccc
Confidence 76543
No 177
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.42 E-value=9.1e-07 Score=84.15 Aligned_cols=77 Identities=17% Similarity=0.313 Sum_probs=66.1
Q ss_pred cceeEEeccCCCCCcceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEE
Q psy12108 518 APRSIQLQRANNSDTGFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKL 597 (665)
Q Consensus 518 ~~r~v~l~rg~~~~~g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V 597 (665)
..+++.+.+. ....+||.+.. + +|..|.++|||+++||++||+|++|||.++.++.+.++.-.++..|..+.+.|
T Consensus 88 ~~~~v~l~~~--~~~~lG~~~~~--g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v 162 (166)
T 1w9e_A 88 FERTITMHKD--STGHVGFIFKN--G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI 162 (166)
T ss_dssp TCEEEEEECC--TTSCCSEEEET--T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEE
T ss_pred CcEEEEEecC--CCCcEeEEEeC--C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEE
Confidence 4567778754 45689999874 3 89999999999999999999999999999999999999999988888888877
Q ss_pred Ec
Q psy12108 598 VT 599 (665)
Q Consensus 598 ~~ 599 (665)
..
T Consensus 163 ~~ 164 (166)
T 1w9e_A 163 MP 164 (166)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 178
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.40 E-value=1.6e-07 Score=80.68 Aligned_cols=58 Identities=19% Similarity=0.268 Sum_probs=50.6
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~~ 603 (665)
+++|..|.++|||++ ||++||+|++|||+++.+ ..++...|... |+.++|+|.+.+..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 467889999999999 999999999999999975 47999999875 77999999987643
No 179
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.36 E-value=6.8e-07 Score=77.28 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=49.1
Q ss_pred eEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh-C-CceeEEEEcCCC
Q psy12108 544 VIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-G-KCLSLKLVTPMH 602 (665)
Q Consensus 544 v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g-~~v~L~V~~~~~ 602 (665)
.+|..|.+||||+++||++||+|++|||++|.++ .++...|... + ..+.++|.+.+.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4688999999999999999999999999999754 7888888764 3 689999998753
No 180
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.35 E-value=9.6e-07 Score=78.48 Aligned_cols=58 Identities=28% Similarity=0.431 Sum_probs=51.6
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
.++.|..|.++|||+++||++||.|++|||+++. +..++...++. ++.+.|+|.+.+.
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 4789999999999999999999999999999997 45788888887 7889999987654
No 181
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.34 E-value=6e-07 Score=78.27 Aligned_cols=59 Identities=24% Similarity=0.279 Sum_probs=50.8
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~~ 603 (665)
.+++|..|.++|||++ ||++||+|++|||+++.++ .++...+... |..+.|+|.+.+..
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4789999999999995 9999999999999999754 7899888863 67899999886543
No 182
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.31 E-value=1.6e-06 Score=76.97 Aligned_cols=58 Identities=26% Similarity=0.340 Sum_probs=50.7
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
.+++|..|.++|||+++||++||+|++|||+++.+ ..++...++ .|..+.|+|.+.+.
T Consensus 35 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETTE
T ss_pred CCeEEEEECCCChHHHCCCCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECCE
Confidence 47899999999999999999999999999999974 578888884 48889999987653
No 183
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.29 E-value=8.1e-07 Score=75.34 Aligned_cols=57 Identities=21% Similarity=0.179 Sum_probs=48.1
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPM 601 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~ 601 (665)
++.|..+.|+|||+++||++||.|++|||+++.++ .++..++... |..+.|+|.+.+
T Consensus 20 G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 20 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 46677888888999999999999999999999754 7888888753 678999998765
No 184
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.29 E-value=1.1e-06 Score=80.82 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=51.0
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMH 602 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~ 602 (665)
.+++|..|.+||||+ +||++||+|++|||+++.++ .++...+... |+.++|+|.+.+.
T Consensus 57 ~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCE
Confidence 578999999999999 99999999999999999755 6888888864 7899999987653
No 185
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.28 E-value=7.9e-07 Score=75.73 Aligned_cols=58 Identities=24% Similarity=0.397 Sum_probs=49.5
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh-CCceeEEEEcCCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA-GKCLSLKLVTPMH 602 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~v~L~V~~~~~ 602 (665)
++.|..|.++|||+++||++||+|++|||+++.+ +.++...+... |..+.++|.+.+.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETTE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECCe
Confidence 4568899999999999999999999999999975 47888888765 6789999987653
No 186
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.27 E-value=7e-07 Score=76.98 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=51.4
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~~ 603 (665)
.+++|..|.++|||++ ||++||+|++|||.++.+ ..++...+... |+.+.|+|.+.+..
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4688999999999999 999999999999999975 47899999874 78999999987643
No 187
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.18 E-value=1.1e-06 Score=95.54 Aligned_cols=69 Identities=16% Similarity=0.308 Sum_probs=57.2
Q ss_pred CcceeEEEEcCC------CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 531 DTGFGFSVRGDA------PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 531 ~~g~Gf~l~g~~------~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
..||||++.... .++|..|.|||||++|||++||+|++|||++|.++. +..+|++.|..|+|+|.+.+.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 457888876432 278999999999999999999999999999999884 667777767789999987654
No 188
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.12 E-value=4.1e-06 Score=82.89 Aligned_cols=58 Identities=21% Similarity=0.227 Sum_probs=47.5
Q ss_pred CeEEEEeCCCChhhhcCCCCC-CEEEEECCEecCCCChHHHHHHHHh-hCCceeEEEEcCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDG-DFIVAIGDRDVKWSPHEEVVQLIKD-AGKCLSLKLVTPM 601 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~G-D~Il~VnG~~v~~~~~~evv~~ik~-~g~~v~L~V~~~~ 601 (665)
+++|..|.|+|||++|||++| |+|++|||+++.++..... .+++. .|..++|+|.+..
T Consensus 17 G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 17 GYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp EEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETT
T ss_pred EEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecC
Confidence 789999999999999999999 9999999999997763322 33333 3778999998754
No 189
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.11 E-value=3.6e-06 Score=73.92 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=46.8
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPM 601 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~ 601 (665)
++.|..+.|++||+++||++||+|++|||+++.++ .++..++.. .|+.+.|+|.+.+
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTST--THHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCeEEEEEEECC
Confidence 34567777888889999999999999999999876 477777775 3678999998764
No 190
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.02 E-value=1.1e-05 Score=84.94 Aligned_cols=69 Identities=17% Similarity=0.344 Sum_probs=58.2
Q ss_pred CcceeEEEEc---CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEc-CC
Q psy12108 531 DTGFGFSVRG---DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVT-PM 601 (665)
Q Consensus 531 ~~g~Gf~l~g---~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~-~~ 601 (665)
...+|+.+.. ..+++|..|.+|+||+++||++||+|++|||+++.++ .++...+.. .|+.++|+|.+ .+
T Consensus 228 ~~~lGi~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~~g 302 (324)
T 1y8t_A 228 HASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDPSG 302 (324)
T ss_dssp CEECCEEEESCSSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECSSC
T ss_pred ccccceEeeeccCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCC
Confidence 3467887764 3489999999999999999999999999999999854 688888875 37899999988 54
No 191
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.01 E-value=1e-05 Score=85.07 Aligned_cols=60 Identities=13% Similarity=0.297 Sum_probs=52.9
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.++|||+++||++||+|++|||+++.+ ..++...|+. .|+.++|+|.|.+..
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 47899999999999999999999999999999975 4789999986 478999999987543
No 192
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.98 E-value=1.1e-05 Score=73.35 Aligned_cols=66 Identities=18% Similarity=0.130 Sum_probs=50.7
Q ss_pred ceeEEEEcCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCC
Q psy12108 533 GFGFSVRGDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMH 602 (665)
Q Consensus 533 g~Gf~l~g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~ 602 (665)
.+-+......+++|..|.+++||+++ |++||+|++|||+++.++ .++...+.. .|+.+.|+| +.+.
T Consensus 16 ~~~~~~~~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 16 NLYFQGHQPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp -------CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred ccccccCCCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 34444334458999999999999999 999999999999999754 788888874 377899999 7654
No 193
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=97.93 E-value=9.8e-06 Score=86.39 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=53.0
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.+||||+++||++||+|++|||++|. +..++...|.. .|+.++|+|.|.+..
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4789999999999999999999999999999997 45799999986 478999999987643
No 194
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.91 E-value=1.7e-05 Score=78.33 Aligned_cols=68 Identities=26% Similarity=0.333 Sum_probs=56.4
Q ss_pred cceeEEEEc-------CCCeEEEEeCCCChhhhcCCCC-CCEEEEECCEecCCCChHHHHHHHHhh-CCceeEEEEcCCC
Q psy12108 532 TGFGFSVRG-------DAPVIVASVDSGSLAQFGGMKD-GDFIVAIGDRDVKWSPHEEVVQLIKDA-GKCLSLKLVTPMH 602 (665)
Q Consensus 532 ~g~Gf~l~g-------~~~v~V~~V~pgspA~~aGLk~-GD~Il~VnG~~v~~~~~~evv~~ik~~-g~~v~L~V~~~~~ 602 (665)
..+|+++.. ..+++|..|.++|||+++||++ ||+|++|||. +.++ +++.+.|+.. |..+.|+|.+...
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~--~~l~~~l~~~~g~~v~l~v~r~~~ 171 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNES--EDLFSLIETHEAKPLKLYVYNTDT 171 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSS--SCHHHHHHHTTTSCEEEEEEETTT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCH--HHHHHHHHhCCCCeEEEEEEECCc
Confidence 367887762 1478999999999999999999 9999999997 7644 6888888876 7789999987643
No 195
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.90 E-value=9.7e-06 Score=92.47 Aligned_cols=69 Identities=19% Similarity=0.279 Sum_probs=57.6
Q ss_pred cceeEEEEcC-CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCCC
Q psy12108 532 TGFGFSVRGD-APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMHK 603 (665)
Q Consensus 532 ~g~Gf~l~g~-~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~~ 603 (665)
.++|+.+..+ .++.|..|.+||||+++||++||+|++|||.+|.. .++.+.|+. .|+.|+|+|.+.+..
T Consensus 485 ~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g~~ 556 (597)
T 4fgm_A 485 VNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRDEL 556 (597)
T ss_dssp CCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETTEE
T ss_pred cccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4789887654 37999999999999999999999999999999953 467777764 478999999987654
No 196
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.81 E-value=2.3e-05 Score=82.71 Aligned_cols=59 Identities=27% Similarity=0.409 Sum_probs=52.1
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.+||||+++||++||+|++|||+++.+ ..++.+.++. ++.+.|+|.|.+..
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 47899999999999999999999999999999974 5789888876 68899999887543
No 197
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.78 E-value=4.5e-05 Score=84.15 Aligned_cols=60 Identities=23% Similarity=0.367 Sum_probs=52.3
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.++|||+++||++||+|++|||++|.++ .++...+.. .|+.++|+|.+.+..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~ 343 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKP 343 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 478999999999999999999999999999999855 788888875 378999999986543
No 198
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.78 E-value=3e-05 Score=85.26 Aligned_cols=60 Identities=18% Similarity=0.288 Sum_probs=53.8
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.+||||+++||++||+|++|||+++.+ ++++.++|+..+..+.|+|.+.+..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEEEECCEE
Confidence 37899999999999999999999999999999974 5899999998777899999887654
No 199
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.73 E-value=3.2e-05 Score=82.37 Aligned_cols=60 Identities=18% Similarity=0.386 Sum_probs=52.8
Q ss_pred CCeEEEEeCCCChhhhcCCCC-----------CCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKD-----------GDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~-----------GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~~ 603 (665)
.+++|..|.++|||+++||++ ||+|++|||++|.++ .++...|... |+.|+|+|.|.+..
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 379999999999999999999 999999999999866 7899988653 78999999987643
No 200
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.69 E-value=3.3e-05 Score=84.91 Aligned_cols=60 Identities=23% Similarity=0.289 Sum_probs=51.6
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhh--CCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDA--GKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~--g~~v~L~V~~~~~~ 603 (665)
.+++|..|.+||||+++||++||+|++|||+++.++ .++...+... |+.++|+|.+.+..
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKP 324 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 478999999999999999999999999999999865 6777777653 77899999876543
No 201
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.68 E-value=7.6e-05 Score=90.26 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=69.6
Q ss_pred hhHHhhc-CcccccccccccccceeEEeccCCCCCcceeEEEEcC-CCeEEEEeCCC--------ChhhhcC--CCCCCE
Q psy12108 498 EDLFKQL-GPVAIFSAKHHWTAPRSIQLQRANNSDTGFGFSVRGD-APVIVASVDSG--------SLAQFGG--MKDGDF 565 (665)
Q Consensus 498 ~d~f~~L-gP~svf~~~~~~~~~r~v~l~rg~~~~~g~Gf~l~g~-~~v~V~~V~pg--------spA~~aG--Lk~GD~ 565 (665)
..|...| +||+.+... .+.. +..+ ..+|+|+.+... .+++|..|.+| |||+++| |+ ||+
T Consensus 710 ~~~~~~l~d~ht~~~~~-~~~~-----~~~~--~~~g~G~~~~~~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~ 780 (1045)
T 1k32_A 710 VEMQGEYRTSHSYEMGG-TFTD-----KDPF--RSGRIACDFKLDGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYL 780 (1045)
T ss_dssp HHHHHTTCCSCCCEECC-CCCS-----CCCC--CCCBCSEEEEEETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCE
T ss_pred HHHHHhcCCCcceEChh-Hhcc-----cccc--ccceecEEEEEeCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCE
Confidence 3466666 477644322 2221 2234 567899887643 47889999998 9999999 99 999
Q ss_pred EEEECCEecCCCChHHHHHHHHhh-CCceeEEEEcCC
Q psy12108 566 IVAIGDRDVKWSPHEEVVQLIKDA-GKCLSLKLVTPM 601 (665)
Q Consensus 566 Il~VnG~~v~~~~~~evv~~ik~~-g~~v~L~V~~~~ 601 (665)
|++|||+++.++. +++.+|++. |..|+|+|.+.+
T Consensus 781 I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 781 IEDIDGETVGAGS--NIYRVLSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp EEEETTEECBTTB--CHHHHHHTTTTSEEEEEEECSS
T ss_pred EEEECCEEccchh--hHHHhhcCCCCCEEEEEEECCC
Confidence 9999999998875 788888876 778999998865
No 202
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.67 E-value=3.5e-05 Score=85.04 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=52.5
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
+++|..|.+||||+++||++||+|++|||+++.+ .+++.++|+..+..+.|+|.+.+.
T Consensus 387 Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAGIRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETTE
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECCE
Confidence 6899999999999999999999999999999974 489999999878899999987654
No 203
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.50 E-value=1.4e-05 Score=84.54 Aligned_cols=59 Identities=22% Similarity=0.345 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMHK 603 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~~ 603 (665)
.+++|..|.+||||+++||++||+|++|||+++..+ .++...++. |+.++|+|.+.+..
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSA--NDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp --------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEE
Confidence 378899999999999999999999999999999754 688888876 77899999886543
No 204
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.28 E-value=8.8e-05 Score=81.77 Aligned_cols=59 Identities=22% Similarity=0.276 Sum_probs=52.0
Q ss_pred CCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHh--hCCceeEEEEcCCC
Q psy12108 542 APVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKD--AGKCLSLKLVTPMH 602 (665)
Q Consensus 542 ~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~--~g~~v~L~V~~~~~ 602 (665)
.+++|..|.+||||+++||++||+|++|||+++.++ .++...+.. .|+.++|+|.+.+.
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 378999999999999999999999999999999876 688888875 47899999988654
No 205
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.27 E-value=3.9e-05 Score=84.55 Aligned_cols=67 Identities=25% Similarity=0.350 Sum_probs=0.0
Q ss_pred eeEEEE---cCCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCCceeEEEEcCCC
Q psy12108 534 FGFSVR---GDAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGKCLSLKLVTPMH 602 (665)
Q Consensus 534 ~Gf~l~---g~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~~v~L~V~~~~~ 602 (665)
+|+.+. ...+++|..|.+||||+++||++||+|++|||+++.+ ++++.++|+..+..+.|+|.+.+.
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEECCE
Confidence 466553 2347899999999999999999999999999999984 578999998766688888887654
No 206
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.69 E-value=0.0014 Score=73.61 Aligned_cols=61 Identities=26% Similarity=0.303 Sum_probs=48.0
Q ss_pred CeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCCh--------HHHHHHHHh--hCCceeEEEEcCCCCC
Q psy12108 543 PVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPH--------EEVVQLIKD--AGKCLSLKLVTPMHKN 604 (665)
Q Consensus 543 ~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~--------~evv~~ik~--~g~~v~L~V~~~~~~~ 604 (665)
|++|..|.|||||+++ |++||+|++|||++|..... ..+..++.. .|+.|+|+|.|.+...
T Consensus 278 Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 278 GVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp CEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 8999999999999987 99999999999999965321 123455554 3889999999876543
No 207
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=95.42 E-value=0.019 Score=64.34 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=47.3
Q ss_pred CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecCCCChHHHHHHHHhhCC-ceeEEE
Q psy12108 541 DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVKWSPHEEVVQLIKDAGK-CLSLKL 597 (665)
Q Consensus 541 ~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~~~~~~evv~~ik~~g~-~v~L~V 597 (665)
..+++|..|.|+++|..+|+++||+|++|||++|.++ .++.++|+.+.+ -+.|..
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEE
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEE
Confidence 3479999999999999999999999999999999854 799999998744 455554
No 208
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=84.05 E-value=1.4 Score=37.78 Aligned_cols=55 Identities=7% Similarity=0.109 Sum_probs=44.1
Q ss_pred HHHhhhhhhHhhHHHHHHH----------Hh-hhhhhh--hhhhhhhhhHhHhhHHHHHHHHhhhccc
Q psy12108 12 AQMVTYGDSKHNQRNVAQL----------QA-TTNRKL--KETVALELSFVNSNLQLLKEQLAELNSS 66 (665)
Q Consensus 12 ~~~~q~~r~~~~~~~~~~~----------~a-~~~~~~--~~~v~lels~~~s~lq~l~~~l~~ln~~ 66 (665)
+.+||.+-..|+++|.||. ++ +.|+.. -++|.-+|.-++.+|..|+.+|.-+.+.
T Consensus 17 kkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~el~K~q~~ 84 (98)
T 2ke4_A 17 RKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLEVQKYEAW 84 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999992 33 456776 6677888999999999999888775544
No 209
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=61.82 E-value=85 Score=27.68 Aligned_cols=30 Identities=10% Similarity=0.262 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHH
Q psy12108 219 EKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAA 257 (665)
Q Consensus 219 EkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AA 257 (665)
|.+.|.||+|.+|.+.| ..++|+.+|++|-
T Consensus 3 e~~~iy~~lG~~~~~~g---------~~~~A~~~~~~al 32 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKG---------DFDGAIRAYKKVL 32 (184)
T ss_dssp -CHHHHHHHHHHHHHHT---------CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHH
Confidence 66889999999998776 3688999999874
No 210
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=38.88 E-value=1.6e+02 Score=24.61 Aligned_cols=35 Identities=9% Similarity=0.044 Sum_probs=26.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHH
Q psy12108 215 TIAFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAG 258 (665)
Q Consensus 215 sl~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG 258 (665)
+...|.|-...|+|-.|...| ..++|+.+|++|--
T Consensus 2 n~~~d~A~a~~~lG~~~~~~~---------~~~~A~~~y~~Al~ 36 (127)
T 4gcn_A 2 NAMTDAAIAEKDLGNAAYKQK---------DFEKAHVHYDKAIE 36 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHH
Confidence 456688888888888776543 37899999999853
No 211
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=37.02 E-value=1.7e+02 Score=33.42 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHH
Q psy12108 220 KACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAG 258 (665)
Q Consensus 220 kasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG 258 (665)
-+-.++|+|.+|.+.| ..++|+.+|++|--
T Consensus 8 ~a~al~nLG~~~~~~G---------~~~eAi~~~~kAl~ 37 (723)
T 4gyw_A 8 HADSLNNLANIKREQG---------NIEEAVRLYRKALE 37 (723)
T ss_dssp HHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHH
Confidence 4678999999987765 37889999999854
No 212
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=36.58 E-value=35 Score=38.23 Aligned_cols=31 Identities=16% Similarity=0.258 Sum_probs=22.4
Q ss_pred CCCeEEEEeCCCChhhhcCCCCCCEEEEECCEecC
Q psy12108 541 DAPVIVASVDSGSLAQFGGMKDGDFIVAIGDRDVK 575 (665)
Q Consensus 541 ~~~v~V~~V~pgspA~~aGLk~GD~Il~VnG~~v~ 575 (665)
+..++|..+.... +++..||.|++|||+++.
T Consensus 95 DG~i~V~dv~~~~----s~I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 95 DGRFYFVDIMTFS----SEIRVGDELLEVDGAPVQ 125 (583)
T ss_dssp TSCEEEEEECSSC----CSSCTTCEEEEETTEEHH
T ss_pred CCcEEEEeccccc----cCCCCCCEEEEECCccHH
Confidence 3356676653222 279999999999999984
No 213
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=25.08 E-value=2.3e+02 Score=27.76 Aligned_cols=184 Identities=12% Similarity=-0.041 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q psy12108 217 AFEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTYLQENFTNAPSMDLGPPMLDMLIQLMLAQARECLF 296 (665)
Q Consensus 217 ~fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~l~e~~~~~ps~Dls~~~L~~L~~lmLAQAQEc~~ 296 (665)
..+.+.++.|+|.+|..++ ...+|+.+|++|.-++.-+ +-......++.++-...-+ --+
T Consensus 72 ~~~~a~~~~~lg~~~~~~g---------~~~~A~~~~~~Al~l~~~~----------g~~~~~a~~~~~lg~~~~~-g~~ 131 (307)
T 2ifu_A 72 LFHAAKAFEQAGMMLKDLQ---------RMPEAVQYIEKASVMYVEN----------GTPDTAAMALDRAGKLMEP-LDL 131 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CGGGGHHHHHHHHHHHHTT----------TCHHHHHHHHHHHHHHHTT-TCH
T ss_pred HHHHHHHHHHHHHHHHhCC---------CHHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHHHHc-CCH
Q ss_pred HHhhhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcCccccCccchhHHHHHHHHH---HHHHHHhhHHHhhhccccc
Q psy12108 297 QKLQLQTTEKCDFQHMLELAQEAAQVAEVYMSLLSLITVPEVKDYVPLSWVSLIQVKK---EHYLALSHYYCASGLLTKS 373 (665)
Q Consensus 297 ~Ka~~~~~~~~~~~l~~~iAklA~qv~~~Y~~a~~~~~~~~~~~~~~~~W~~~~~~K~---~~f~A~A~y~~a~~l~~~~ 373 (665)
++|+ .+|.+|................|..+-.+-. .|=.|+.+|..++.+....
T Consensus 132 ~~A~-----------------------~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 132 SKAV-----------------------HLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHH-----------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHH-----------------------HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q ss_pred ccccchhhhhhhhhccccccccccccccCCCCcHHHHhHHHHHHH-----HHHHHHHHHHHHHHhHhhhhcchhHHHHHH
Q psy12108 374 LANLSSTAQTVLSYLHIPQENKKNLILEFEPEDESQRKQLGVAHL-----RSALLFHEESQRIYRMCRELRNKQALFQVL 448 (665)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~kahL-----r~A~~~~eeAlRl~~~c~~lr~~~~L~~vl 448 (665)
........-...++..++ ..|+..+++++ +..-....+....+...+
T Consensus 189 ---------------------------~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~ 240 (307)
T 2ifu_A 189 ---------------------------ENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGSEDCAALEDLL 240 (307)
T ss_dssp ---------------------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHH
T ss_pred ---------------------------CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHH
Q ss_pred HHHHHhHHHHhhhhcchhhhhhh
Q psy12108 449 VQAHTLTLEMYADVEEEDEFNTM 471 (665)
Q Consensus 449 ~~a~~~s~~~y~~~~~edd~~~~ 471 (665)
...-..-...+.++...+.+..+
T Consensus 241 ~~~~~~d~~~~~~~~~~~~~~~l 263 (307)
T 2ifu_A 241 QAYDEQDEEQLLRVCRSPLVTYM 263 (307)
T ss_dssp HHHHTTCHHHHHHHTTSHHHHTS
T ss_pred HHHHhcCHHHHHHHHhCchhhhh
No 214
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=24.76 E-value=5.2e+02 Score=25.64 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHH
Q psy12108 218 FEKACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFT 261 (665)
Q Consensus 218 fEkasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~ 261 (665)
.+.+.+++|+|.+|..+| ....|..+|++|--+|.
T Consensus 138 ~~~a~~~~~lg~~y~~~~---------~~~~A~~~~~~al~~~~ 172 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMK---------QTHVSMYHILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC---------CcHHHHHHHHHHHHHHH
Confidence 588999999999987765 36789999999877764
No 215
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=23.06 E-value=4.9e+02 Score=26.42 Aligned_cols=35 Identities=14% Similarity=0.030 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhHHHH
Q psy12108 220 KACVLFNMAAIYTQMAAKQDRLTSTGLDQAVDNFLRAAGTFTYL 263 (665)
Q Consensus 220 kasVLfNiaal~sqia~~~~r~t~~glK~A~~~Fq~AAG~f~~l 263 (665)
++.+..|+|.+|...| ..++|+.+|++|--++.-.
T Consensus 50 ~a~~yn~Lg~~~~~~G---------~~~eAl~~~~kAl~~~~~~ 84 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKG---------QNEAALECLRKAEELIQQE 84 (472)
T ss_dssp CCHHHHHHHHHHHHTT---------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHhc
Confidence 3566667888876655 2689999999997776543
No 216
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=21.87 E-value=1e+02 Score=28.39 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC--ChhhHHHHHHHHHHH
Q psy12108 220 KACVLFNMAAIYTQMAAKQDRL--TSTGLDQAVDNFLRA 256 (665)
Q Consensus 220 kasVLfNiaal~sqia~~~~r~--t~~glK~A~~~Fq~A 256 (665)
.+-++||+|.+|+.+|.-..+. ..+..++|+.+|++|
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kA 117 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQA 117 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHH
Confidence 5567899999999888642110 002355555555555
No 217
>3iu6_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo0ID, PBRM1, BRG associated factor 180, structural genomics, SGC; HET: OCS; 1.79A {Homo sapiens}
Probab=21.41 E-value=2.6e+02 Score=25.38 Aligned_cols=43 Identities=2% Similarity=0.054 Sum_probs=31.6
Q ss_pred ccccccCCCCC-----CCCCCChHHHHHHHhhhcCCChhhHHHHHHHHH
Q psy12108 114 VMPMIPLGLKE-----TKEIDVREPFKDFILEHYSEDGTAYEDSVSEFM 157 (665)
Q Consensus 114 ~~pmi~l~lK~-----T~~vD~~~~L~~~I~~~y~e~~~~~~~~i~~l~ 157 (665)
.-||+-||=|. ..+++|.. +++=|....+.+.+.|.+|+..+-
T Consensus 31 sd~F~~LPsk~pdYY~k~Pi~l~~-Ikkri~~~~Y~sld~f~~D~~lmf 78 (147)
T 3iu6_A 31 SDSLAEIPAVDPNFPNKPPLTFDI-IRKNVENNRYRRLDLFQEHMFEVL 78 (147)
T ss_dssp GGGGTTCCSSCTTSTTSCCCCHHH-HHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred hHHHhHCCCCCccccCCCCcCHHH-HHHHHhcCCCCCHHHHHHHHHHHH
Confidence 34455555555 56888875 788888888888888888887664
Done!