BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12112
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 154 ERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQ 213
E ++ +N PGP+I+ GD VVV++ N + IHWHGI QRGT ++DG ++Q
Sbjct: 21 ENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80
Query: 214 CPITQGNTFRYQFTA-NAGTHFWHAHTG 240
C I G TF Y FT N GT F+H H G
Sbjct: 81 CAINPGETFFYNFTVDNPGTFFYHGHLG 108
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 150 ADGVE-RGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGV 208
DG++ R ++ N P P I V +GDRV + + N M+ ++H+HG+ Q GT DGV
Sbjct: 16 VDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGV 75
Query: 209 PFVTQCPITQGNTFRYQFTA--NAGTHFWHAHT 239
PF+TQCPI G+T Y FT N GT+++H+HT
Sbjct: 76 PFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHT 108
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN-------TIHWHGIHQR 200
V DG R + N + PGP I +GD ++V +D L N TIHWHG+ Q
Sbjct: 15 VTPDGFTRAAVVANGVFPGPLITGNKGDNFQINV---IDNLTNATMLKTTTIHWHGLFQH 71
Query: 201 GTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
GT ++DG FV QCPI GN+F Y FT AGT ++H+H
Sbjct: 72 GTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSH 111
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG---LENT-IHWHGIHQRGTQ 203
++ DG ER + VN + P P I GD +++ N M L+ T IHWHG Q+GT
Sbjct: 15 IVPDGFERAAIVVNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTN 74
Query: 204 YSDGVPFVTQCPITQGNTFRYQFT--ANAGTHFWHAH 238
++DG F+ QCPI GN+F Y F AGT ++H+H
Sbjct: 75 WADGPAFINQCPIASGNSFLYDFQVPGQAGTFWYHSH 111
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 145 CQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQY 204
+ VL + A N +P P I V EGD V V+V N M L +TIHWHG+ QRGT
Sbjct: 12 TRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTN-MTTLPHTIHWHGMLQRGTWQ 70
Query: 205 SDGVPFVTQCPITQGNTFRYQFTAN-AGTHFWHAHTGC 241
SDGVP TQ I G+TF Y+F A AGT ++H H
Sbjct: 71 SDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNV 108
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDG 207
+ DG R + N +PGP+I GD +++ V N+++ +IHWHGI Q G+ DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 208 VPFVTQCPITQGNTFRYQF-TANAGTHFWHAH 238
VP VTQCPI G+T Y+F GT ++H+H
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSH 170
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDG 207
+ DG R + N +PGP+I GD +++ V N+++ +IHWHGI Q G+ DG
Sbjct: 79 ITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDG 138
Query: 208 VPFVTQCPITQGNTFRYQF-TANAGTHFWHAH 238
VP VTQCPI G+T Y+F GT ++H+H
Sbjct: 139 VPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSH 170
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 15/119 (12%)
Query: 126 LGAACQLCTPNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSM 185
+G + L NA V ADG R + VN PGP I +GD+ ++V N++
Sbjct: 2 IGPSANLVVTNA---------AVAADGHSRDAVVVNGGTPGPLITGNKGDQFQLNVINNL 52
Query: 186 DGL----ENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++HWHG Q+GT ++DG FV QCPI G++F Y F+ AGT ++H+H
Sbjct: 53 TNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGSSFLYDFSTPIQAGTFWYHSH 111
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG---LENT-IHWHGIHQRGT 202
V DG R + VN + P P I +GDR ++V ++M L++T IHWHG Q GT
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 203 QYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++DG FV QCPI+ G+ F Y F AGT ++H+H
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSH 111
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG---LENT-IHWHGIHQRGT 202
V DG R + VN + P P I +GDR ++V ++M L++T IHWHG Q GT
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 203 QYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++DG FV QCPI+ G+ F Y F AGT ++H+H
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSH 111
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG---LENT-IHWHGIHQRGT 202
V DG R + VN + P P I +GDR ++V ++M L++T IHWHG Q GT
Sbjct: 14 AVSPDGFSRQAILVNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGT 73
Query: 203 QYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++DG FV QCPI+ G+ F Y F AGT ++H+H
Sbjct: 74 NWADGPAFVNQCPISTGHAFLYDFQVPDQAGTFWYHSH 111
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 126 LGAACQLCTPNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRV---VVDVR 182
+G A L NA V DG R + VN + P P I +GDR VVD
Sbjct: 2 IGPAASLVVANAP---------VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTL 52
Query: 183 NSMDGLENT-IHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
+ L++T IHWHG Q GT ++DG FV QCPI G++F Y F AGT ++H+H
Sbjct: 53 TNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSH 111
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN-------TIHWHGIHQ 199
V DG R + VN PGP I GDR ++V +D L N +IHWHG Q
Sbjct: 14 AVSPDGFSRQAVVVNGGTPGPLITGNMGDRFQLNV---IDNLTNHTMLKSTSIHWHGFFQ 70
Query: 200 RGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
+GT ++DG F+ QCPI+ G++F Y F AGT ++H+H
Sbjct: 71 KGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSH 111
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 135 PNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN---- 190
P A NT+ + DG R + VN + PGP + GDR ++V +D L N
Sbjct: 4 PVADNTITNAATS--PDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNV---IDNLTNHTML 58
Query: 191 ---TIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++HWHG Q+GT ++DG F+ QCPI+ G++F Y F AGT ++H+H
Sbjct: 59 KTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSH 111
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN-------TIHWHGIHQR 200
V DG R + VN + P P I +GDR ++V +D L N +IHWHG Q+
Sbjct: 15 VSPDGFAREAVVVNGITPAPLITGNKGDRFQLNV---IDQLTNHTMLKTSSIHWHGFFQQ 71
Query: 201 GTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
GT ++DG FV QCPI G++F Y F AGT ++H+H
Sbjct: 72 GTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSH 111
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN-------TIHWHGIHQ 199
V DG R + VN + PGP + GDR ++V +D L N +IHWHG Q
Sbjct: 14 AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNV---IDNLTNHTMLKSTSIHWHGFFQ 70
Query: 200 RGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
GT ++DG F+ QCPI+ G++F Y F AGT ++H+H
Sbjct: 71 HGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSH 111
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 147 CVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN-------TIHWHGIHQ 199
V DG R + VN + PGP + GDR ++V +D L N +IHWHG Q
Sbjct: 14 AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNV---IDNLTNHTMLKSTSIHWHGFFQ 70
Query: 200 RGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
GT ++DG F+ QCPI+ G++F Y F AGT ++H+H
Sbjct: 71 HGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSH 111
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 135 PNATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN---- 190
P A NT+ DG R + VN + PGP + GDR ++V +D L N
Sbjct: 4 PVADNTITDAATS--PDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNV---IDNLTNHTML 58
Query: 191 ---TIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAH 238
++HWHG Q+GT ++DG F+ QCPI+ G++F Y F AGT ++H+H
Sbjct: 59 KTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSH 111
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 136 NATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG----LENT 191
N+ +T+ V DG R + VN + GP I+ + D ++V N +D +
Sbjct: 4 NSVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTS 62
Query: 192 IHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFT--ANAGTHFWHAHTG 240
IHWHG+ QRGT ++DG V QCPI+ G+ F Y+FT +AGT ++H+H G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFG 113
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 136 NATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG----LENT 191
N+ +T+ V DG R + VN + GP I+ + D ++V N +D +
Sbjct: 4 NSVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTS 62
Query: 192 IHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFT--ANAGTHFWHAHTG 240
IHWHG+ QRGT ++DG V QCPI+ G+ F Y+FT +AGT ++H+H G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFG 113
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDG----LENTIHWHGIHQRGTQ 203
++ DG R + PGP I GD + N + ++ +IHWHG Q+GT
Sbjct: 16 IVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTN 75
Query: 204 YSDGVPFVTQCPITQGNTFRYQFT--ANAGTHFWHAH 238
++DG F+TQCPI GN+F Y F AGT+++H+H
Sbjct: 76 WADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSH 112
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 131 QLCTPNATNTVWSHC------QCVLADGVERGI-LAVNRMLPGPSIQVCEGDRVVVDVRN 183
++ TPN TV + DGV + + + VN + GP+I+ GD + V V N
Sbjct: 65 EVSTPNTGRTVAYQLTLTEKENWIGPDGVLKNVVMLVNDKIIGPTIRANWGDNIEVTVIN 124
Query: 184 SMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPI-TQGNTFRYQFTANA-GTHFWHAH 238
++ ++HWHG+ Q G ++DG VT+CPI +G Y+F A GT ++H+H
Sbjct: 125 NLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYGTSWYHSH 181
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 153 VERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVT 212
V+ ++ +N + GP+I GD V V V N++ +IHWHGIHQ+ T DG VT
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 213 QCPI-TQGNTFRYQFTANA-GTHFWHAH 238
+CPI +G Y++ A GT ++H+H
Sbjct: 113 ECPIPPKGGQRTYRWRARQYGTSWYHSH 140
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 153 VERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVT 212
V+ ++ +N + GP+I GD V V V N++ +IHWHGIHQ+ T DG VT
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVT 112
Query: 213 QCPI-TQGNTFRYQFTANA-GTHFWHAH 238
+CPI +G Y++ A GT ++H+H
Sbjct: 113 ECPIPPKGGQRTYRWRARQYGTSWYHSH 140
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 153 VERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVT 212
V+ ++ +N + GP+I GD V V V N++ +IHWHGI Q+ T DG VT
Sbjct: 53 VKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVT 112
Query: 213 QCPI-TQGNTFRYQFTANA-GTHFWHAH 238
+CPI +G Y++ A GT ++H+H
Sbjct: 113 ECPIPPKGGQRTYRWRARQYGTSWYHSH 140
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 191 TIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFT--ANAGTHFWHAH 238
+IHWHG Q GT DG FV QCPI +F Y F AGT+++H+H
Sbjct: 83 SIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSH 132
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGN 220
N ++P P I+V EGD++ + V+N + TIHWHG+ Q DG P PI G
Sbjct: 76 NGLVPAPKIEVFEGDKLEILVKNKLKE-ATTIHWHGVPVPPDQ--DGSP---HDPILAGE 129
Query: 221 TFRYQFTA---NAGTHFWHAH 238
Y+F +AGT+++H H
Sbjct: 130 ERIYRFEIPQDSAGTYWYHPH 150
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGV 208
+A G+ + N +PGP++ EGD + + N+ +TIH+HG+H R T DG
Sbjct: 48 IAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNA-GAHPHTIHFHGVH-RATM--DGT 103
Query: 209 PFVTQCPITQGNTFRYQFTANA-GTHFWHAH 238
P + I G +F Y+F A GTH +H H
Sbjct: 104 PGIGAGSIAPGQSFTYEFDATPFGTHLYHCH 134
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRG 201
N L GP++++ G V VD+ N + E T+HWHG+ G
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPG 81
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVP 209
N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 42 NGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEVPGE--VDGGP 87
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 152 GVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGI 197
G E+G +V PGP I+V EGD + ++ N+MD + ++H HG+
Sbjct: 66 GFEKGKASV----PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGL 106
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 152 GVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGI 197
G E+G +V PGP I+V EGD + ++ N+MD + ++H HG+
Sbjct: 29 GFEKGKASV----PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGL 69
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 152 GVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGI 197
G E+G +V PGP I+V EGD + ++ N+MD + ++H HG+
Sbjct: 28 GFEKGKASV----PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGL 68
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGI 197
+ G E+G +V PGP I+V EGD + ++ N+MD + ++H HG+
Sbjct: 22 MGYGFEKGKASV----PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGL 65
>pdb|2PMU|A Chain A, Crystal Structure Of The Dna-Binding Domain Of Phop
pdb|2PMU|C Chain C, Crystal Structure Of The Dna-Binding Domain Of Phop
pdb|2PMU|D Chain D, Crystal Structure Of The Dna-Binding Domain Of Phop
pdb|2PMU|E Chain E, Crystal Structure Of The Dna-Binding Domain Of Phop
pdb|2PMU|F Chain F, Crystal Structure Of The Dna-Binding Domain Of Phop
pdb|2PMU|B Chain B, Crystal Structure Of The Dna-Binding Domain Of Phop
Length = 110
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 93 AELSSPEECARACREGEPPKLCYYHFTLELYTVLGAACQLCTPNATNTVWSH 144
A++ EE + G+P L FTL Y V+ A L P + VW +
Sbjct: 15 ADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRY 66
>pdb|3R0J|A Chain A, Structure Of Phop From Mycobacterium Tuberculosis
pdb|3R0J|B Chain B, Structure Of Phop From Mycobacterium Tuberculosis
Length = 250
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 93 AELSSPEECARACREGEPPKLCYYHFTLELYTVLGAACQLCTPNATNTVWSH 144
A++ EE + G+P L FTL Y V+ A L P + VW +
Sbjct: 157 ADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRY 208
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQY---SDGVPFVTQCPITQGN 220
+PGP +++ EGD + +D+ N+ D + + +H G Y SDG + + G
Sbjct: 55 VPGPVLEMWEGDTLEIDLVNTTDRVLS------LHPHGVDYDVNSDGT-LMNGSAVMPGQ 107
Query: 221 TFRYQFTANAGTH------------FWHAH 238
T RY + ++ G +WH H
Sbjct: 108 TRRYTWRSHVGYRRADGSWAEGTAGYWHYH 137
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGI 197
+ G+E+G +PGP I++ EGD + ++ N+MD + ++H HG+
Sbjct: 28 MGYGLEKG----KATIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGL 71
>pdb|3DI4|A Chain A, Crystal Structure Of A Duf1989 Family Protein (spo0365)
From Silicibacter Pomeroyi Dss-3 At 1.60 A Resolution
pdb|3DI4|B Chain B, Crystal Structure Of A Duf1989 Family Protein (spo0365)
From Silicibacter Pomeroyi Dss-3 At 1.60 A Resolution
Length = 286
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDV---RNSMDGLENTIHWHGIHQRGTQYS 205
L D ER R L G V G+R+ ++ R +E+T+ W+GI Q G
Sbjct: 87 LHDLTERFFSGKTRALHG--THVTTGERLWSNLPYLRPXATIIEDTLGWYGIDQYGGSVH 144
Query: 206 DGVPFVTQCPITQGNTFRYQFTANAGTHFWHA-----------HTGCPMSE 245
D + T+C GN AG H+ H HTG P+ E
Sbjct: 145 DVI--GTRCDPYTGNLL-------AGGHYHHCCHSNLTRALADHTGLPLHE 186
>pdb|2ZOO|A Chain A, Crystal Structure Of Nitrite Reductase From
Pseudoalteromonas Haloplanktis Tac125
Length = 442
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHGIHQRGTQYSDG 207
+ADGVE + +PG I+V EGD + ++ N + + I H + G G
Sbjct: 42 IADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPG----GG 97
Query: 208 VPFVTQCPITQGNTFRYQFTA-NAGTHFWHAHT 239
P G+T + F A N G + +H T
Sbjct: 98 AESSFTAP---GHTSTFNFKALNPGLYIYHCAT 127
>pdb|2BO0|A Chain A, Crystal Structure Of The C130a Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + + + +HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHG 95
Query: 197 IHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGTHFWHA 237
T G P Q T R++ +GT +HA
Sbjct: 96 ----ATGALGGAKLTNVNPGEQA-TLRFK-ADRSGTFVYHA 130
>pdb|2XX0|A Chain A, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
pdb|2XX0|B Chain B, Structure Of The N90s-H254f Mutant Of Nitrite Reductase
From Alcaligenes Xylosoxidans
Length = 336
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + +++ +HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|1GS8|A Chain A, Crystal Structure Of Mutant D92n Alcaligenes Xylosoxidans
Nitrite Reductase
Length = 336
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + + +++HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVNFHG 95
>pdb|2XX1|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|B Chain B, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|D Chain D, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|E Chain E, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
pdb|2XX1|F Chain F, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans Complexed With Nitrite
Length = 336
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + +++ +HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|2XXG|A Chain A, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
pdb|2XXG|C Chain C, Structure Of The N90s Mutant Of Nitrite Reductase From
Alcaligenes Xylosoxidans
Length = 336
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + +++ +HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHSVDFHG 95
>pdb|1OE2|A Chain A, Atomic Resolution Structure Of D92e Mutant Of Alcaligenes
Xylosoxidans Nitrite Reductase
Length = 336
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 138 TNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRN-SMDGLENTIHWHG 196
T T+ + G + N +PGP++ V EGD V + + N + + + + + +HG
Sbjct: 36 TMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHG 95
>pdb|2IWF|A Chain A, Resting Form Of Pink Nitrous Oxide Reductase From
Achromobacter Cycloclastes
pdb|2IWF|B Chain B, Resting Form Of Pink Nitrous Oxide Reductase From
Achromobacter Cycloclastes
pdb|2IWK|A Chain A, Inhibitor-Bound Form Of Nitrous Oxide Reductase From
Achromobacter Cycloclastes At 1.7 Angstrom Resolution
pdb|2IWK|B Chain B, Inhibitor-Bound Form Of Nitrous Oxide Reductase From
Achromobacter Cycloclastes At 1.7 Angstrom Resolution
Length = 642
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 146 QCVLADG--VERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHW-----HGI- 197
+ V+ DG V + +V PS V EGD V V V N +D +++ H HG+
Sbjct: 537 EAVIRDGNKVRVYMTSVAPSFSQPSFTVKEGDEVTVIVTN-LDEIDDLTHGFTMGNHGVA 595
Query: 198 HQRGTQYSDGVPFVTQCP 215
+ G Q + V FV P
Sbjct: 596 MEVGPQQTSSVTFVAANP 613
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,888,570
Number of Sequences: 62578
Number of extensions: 274057
Number of successful extensions: 648
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 76
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)