RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12112
(246 letters)
>d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 131
Score = 101 bits (254), Expect = 4e-28
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 136 NATNTVWSHCQCVLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN----T 191
N+ +T+ V DG R + VN + GP I+ + D ++V N +D +
Sbjct: 4 NSVDTMTLTNANVSPDGFTRAGILVNGV-HGPLIRGGKNDNFELNVVNDLDNPTMLRPTS 62
Query: 192 IHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAHTG 240
IHWHG+ QRGT ++DG V QCPI+ G+ F Y+FT +AGT ++H+H G
Sbjct: 63 IHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFG 113
>d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 130
Score = 99.3 bits (247), Expect = 4e-27
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLE----NTIHWHGIHQRGTQ 203
V DG R + VN + P P I +GDR ++V +++ +IHWHG Q GT
Sbjct: 15 VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTN 74
Query: 204 YSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAHTG 240
++DG FV QCPI G++F Y F AGT ++H+H
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLS 113
>d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 136
Score = 95.5 bits (237), Expect = 2e-25
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 146 QCVLADGV-ERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLEN----TIHWHGIHQR 200
+ DG R + P I DR ++V + + +IHWHG Q
Sbjct: 12 ANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQA 71
Query: 201 GTQYSDGVPFVTQCPITQGNTFRYQFTA--NAGTHFWHAHTG 240
GT DG FV QCPI +F Y F AGT+++H+H
Sbjct: 72 GTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLS 113
>d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita
pepo var. medullosa) [TaxId: 3663]}
Length = 129
Score = 92.1 bits (228), Expect = 2e-24
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 151 DGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPF 210
+ E ++ +N PGP+I+ GD VVV++ N + IHWHGI QRGT ++DG
Sbjct: 18 NCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS 77
Query: 211 VTQCPITQGNTFRYQFTAN-AGTHFWHAHTG 240
++QC I G TF Y FT + GT F+H H G
Sbjct: 78 ISQCAINPGETFFYNFTVDNPGTFFYHGHLG 108
>d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 77.8 bits (191), Expect = 1e-18
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGV 208
+ DGVE + +PG I+V EGD V V+ N+ + H + G
Sbjct: 40 MDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPS----STVPHNVDFHAATGQGGG 95
Query: 209 PFVTQCPITQGNTFRYQFTAN-AGTHFWHAHTGC 241
G T + F A G + +H
Sbjct: 96 A--AATFTAPGRTSTFSFKALQPGLYIYHCAVAP 127
>d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 159
Score = 77.5 bits (190), Expect = 2e-18
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 7/99 (7%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDG 207
+ G + N +PGP++ V EGD V + + N H + G
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPA----TNAMPHNVEFHGAT--GA 99
Query: 208 VPFVTQCPITQGNTFRYQFTA-NAGTHFWHAHTGCPMSE 245
+ + G +F A +GT +H +
Sbjct: 100 LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPW 138
>d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId:
204285]}
Length = 162
Score = 75.2 bits (184), Expect = 2e-17
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 146 QCVLADGV-ERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQY 204
+ DGV + ++ +N + GP+I GD V V V N++ +IHWHGIHQ+ T
Sbjct: 45 NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNL 104
Query: 205 SDGVPFVTQCPITQ-GNTFRYQFTAN-AGTHFWHAHTG 240
DG VT+CPI G Y++ A GT ++H+H
Sbjct: 105 HDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFS 142
>d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 153
Score = 74.4 bits (182), Expect = 2e-17
Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 149 LADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGV 208
L + + + +PGP + V EGD V + + N + H I + G
Sbjct: 44 LDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE----NTMPHNIDFHAATGALGG 99
Query: 209 PFVTQCPITQGNTFRYQFTA-NAGTHFWHAHTGCPMSE 245
+T I G +F A AG +H G PM
Sbjct: 100 GGLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIP 135
>d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes
xylosoxidans [TaxId: 85698]}
Length = 157
Score = 73.2 bits (179), Expect = 6e-17
Identities = 18/99 (18%), Positives = 30/99 (30%), Gaps = 7/99 (7%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDG 207
+ +G E + N +PGP + V E D V + + N H I
Sbjct: 45 IDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDT----NTLLHNIDFHAAT--GA 98
Query: 208 VPFVTQCPITQGNTFRYQFTA-NAGTHFWHAHTGCPMSE 245
+ + G +F A G +H +
Sbjct: 99 LGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPW 137
>d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 192
Score = 72.5 bits (177), Expect = 2e-16
Identities = 21/94 (22%), Positives = 29/94 (30%), Gaps = 18/94 (19%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQ----YSDGVP--FVTQCPIT 217
GP I+ GD+V V ++N H HGI Y D +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASRPYT-FHSHGITYYKEHEGAIYPDNTTDFQRADDKVY 131
Query: 218 QGNTFRYQFTA-----------NAGTHFWHAHTG 240
G + Y A N T +H+H
Sbjct: 132 PGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHID 165
>d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 140
Score = 67.8 bits (165), Expect = 4e-15
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Query: 151 DGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPF 210
G N L GP++++ G V VD+ N + E T+HWHG+ G DG P
Sbjct: 30 GGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLHWHGLEVPGEV--DGGP- 85
Query: 211 VTQCPITQGNTFRYQFTAN--AGTHFWHAHTGCPMSE 245
Q I G + A T ++H H
Sbjct: 86 --QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGR 120
>d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus
subtilis [TaxId: 1423]}
Length = 181
Score = 68.3 bits (166), Expect = 7e-15
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 26/118 (22%)
Query: 148 VLADGVERGILAVNRMLPGPSIQVCEGDRVVVDVRNSM---------------------D 186
+ D + N + PGP+I+V + V V N++
Sbjct: 38 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 97
Query: 187 GLENTIHWHGIHQRGTQYSDGVPFVTQCPITQG---NTFRYQFTAN--AGTHFWHAHT 239
++ +H HG + ++ G Y + ++H H
Sbjct: 98 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHA 155
>d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 180
Score = 67.0 bits (163), Expect = 2e-14
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 18/94 (19%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQ----YSDGVPFVTQC--PIT 217
L GP++ GD + V +N +IH GI YSD + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKAHK-PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 218 QGNTFRYQFTA-----------NAGTHFWHAHTG 240
G + Y++ TH ++++
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVN 149
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 67.4 bits (164), Expect = 3e-14
Identities = 13/98 (13%), Positives = 24/98 (24%), Gaps = 22/98 (22%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQ----------RGTQYSDGVPFVTQ 213
+ GP I GD + V N +I G+ +
Sbjct: 83 ILGPVIWAEVGDTIRVTFHNKGAY-PLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSA 141
Query: 214 CPITQGNTFRYQFTA-----------NAGTHFWHAHTG 240
+ TF Y++T +++
Sbjct: 142 SHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVD 179
>d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId:
920]}
Length = 153
Score = 62.5 bits (151), Expect = 6e-13
Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 12/87 (13%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQY-------SDGVPFVTQCPI 216
P++++ G V V N+ G H I ++G Y
Sbjct: 57 KKNPTLEIPAGATVDVTFINTNKGF---GHSFDITKKGPPYAVMPVIDPIVAGTGFSPVP 113
Query: 217 TQGNTFRYQFTA--NAGTHFWHAHTGC 241
G FT AGT+++
Sbjct: 114 KDGKFGYTNFTWHPTAGTYYYVCQIPG 140
>d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 179
Score = 58.1 bits (140), Expect = 3e-11
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 21/88 (23%)
Query: 164 LPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFR 223
+ GP + GD+V + +N +IH HG+ + T P G T
Sbjct: 83 ILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQTESS---------TVTPTLPGETLT 132
Query: 224 YQFTA-----------NAGTHFWHAHTG 240
Y + +++
Sbjct: 133 YVWKIPERSGAGTEDSACIPWAYYSTVD 160
>d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 139
Score = 54.8 bits (131), Expect = 3e-10
Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Query: 161 NRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGN 220
+ P +++ E + V + + N + G + H Q + + P+ G+
Sbjct: 46 GMIYNLPGLRMYEQEWVRLHLLN-LGGSRDIHVVHFHGQTLLENGTQQHQLGVWPLLPGS 104
Query: 221 TFRYQFTA-NAGTHFWHAHTGCPMS 244
+ A G G
Sbjct: 105 FKTLEMKASKPGWWLLDTEVGEIQR 129
>d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 149
Score = 52.4 bits (125), Expect = 3e-09
Identities = 11/75 (14%), Positives = 17/75 (22%), Gaps = 2/75 (2%)
Query: 167 PSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQF 226
+ + GD V + + + H GV I G +
Sbjct: 60 QGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEM 118
Query: 227 TA-NAGTHFWHAHTG 240
G H H
Sbjct: 119 FPRTPGIWLLHCHVT 133
>d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 145
Score = 50.9 bits (121), Expect = 8e-09
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 159 AVNRMLPG--PSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPI 216
++N + G P + +C+GD VV + ++ N HGI+ G Y +
Sbjct: 49 SMNGFMYGNQPGLTMCKGDSVVWYLFSAG----NEADVHGIYFSGNTYLWRGERRDTANL 104
Query: 217 TQGNTFRYQFTA-NAGTHFWHAHTGCPMS 244
+ GT T +
Sbjct: 105 FPQTSLTLHMWPDTEGTFNVECLTTDHYT 133
>d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus)
[TaxId: 9913]}
Length = 116
Score = 49.7 bits (118), Expect = 1e-08
Identities = 13/85 (15%), Positives = 22/85 (25%), Gaps = 7/85 (8%)
Query: 159 AVNRMLPG--PSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPI 216
VN + G P I VC D + + + IH G ++ +
Sbjct: 25 TVNGYVNGTMPDITVCAHDHISWHLIGMS----SGPELFSIHFNGQVLEQNHHKISAITL 80
Query: 217 TQGNTFRYQFTA-NAGTHFWHAHTG 240
+ T G +
Sbjct: 81 VSATSTTANMTVSPEGRWTIASLIP 105
>d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 146
Score = 44.9 bits (105), Expect = 1e-06
Identities = 15/84 (17%), Positives = 23/84 (27%), Gaps = 7/84 (8%)
Query: 160 VNRMLPG--PSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPIT 217
VN G P + +C DRV + N + H G ++ + +
Sbjct: 51 VNGYTFGSLPGLSMCAEDRVKWYLFGMG----NEVDVHAAFFHGQALTNKNYRIDTINLF 106
Query: 218 QGNTFRYQFTA-NAGTHFWHAHTG 240
F A N G
Sbjct: 107 PATLFDAYMVAQNPGEWMLSCQNL 130
>d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia
coli [TaxId: 562]}
Length = 181
Score = 33.1 bits (75), Expect = 0.018
Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 10/82 (12%)
Query: 167 PSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPIT-------QG 219
P +G + D + + H HG R + P +
Sbjct: 85 PMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNV 144
Query: 220 NTFRYQFTANA---GTHFWHAH 238
+ +F +A + H H
Sbjct: 145 SEVLVKFNHDAPKEHAYMAHCH 166
>d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria
gonorrhoeae, AniA [TaxId: 485]}
Length = 151
Score = 32.0 bits (72), Expect = 0.027
Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 160 VNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDG---VPFVTQCPI 216
V + +++ G+ V + V N L ++ H G G V +
Sbjct: 44 VGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIV 103
Query: 217 TQGNTFRYQFTAN-AGTHFWHAH 238
G + +F + G + H
Sbjct: 104 PAGGSAIVEFKVDIPGNYTLVDH 126
>d1bg1a2 b.2.5.5 (A:322-575) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 254
Score = 32.5 bits (74), Expect = 0.030
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 25 WASASLKPAFPDVAGDP-FFAAPDPLAPAPQISETLNPSFGSSSNPTYPDLGYTSLDFDT 83
WAS + + FF P Q++E L+ F S++ G + T
Sbjct: 153 WASILWYNMLTNNPKNVNFFTKPPI-GTWDQVAEVLSWQFSSTTK-----RGLSIEQLTT 206
Query: 84 RGLDVLRGNAELSSPEEC-ARACREGEPPK 112
+L S + A+ C+E K
Sbjct: 207 LAEKLLGPGVNYSGCQITWAKFCKENMAGK 236
>d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas
europaea [TaxId: 915]}
Length = 112
Score = 31.2 bits (70), Expect = 0.037
Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 16/94 (17%)
Query: 150 ADGVE-RGILAVNRMLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGV 208
+GV + I A N + ++ V +GD V V V N +
Sbjct: 20 VEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENK-SPISEGFSIDAFGV--------- 69
Query: 209 PFVTQCPITQGNTFRYQFTANAGTHFW-HAHTGC 241
Q I G T FTA+ F
Sbjct: 70 ----QEVIKAGETKTISFTADKAGAFTIWCQLHP 99
>d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 199
Score = 27.5 bits (60), Expect = 1.2
Identities = 13/77 (16%), Positives = 22/77 (28%), Gaps = 11/77 (14%)
Query: 173 EGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQ----------GNTF 222
+ + G + H HG + + + PI + G+
Sbjct: 78 STIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNV 137
Query: 223 RYQFTA-NAGTHFWHAH 238
+F N G F H H
Sbjct: 138 TIRFQTDNPGPWFLHCH 154
>d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos
taurus) [TaxId: 9913]}
Length = 67
Score = 25.7 bits (56), Expect = 1.4
Identities = 4/35 (11%), Positives = 9/35 (25%), Gaps = 11/35 (31%)
Query: 215 PITQGNTFRYQFTA-----------NAGTHFWHAH 238
I T+ Y + A +++
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSA 36
>d1bf5a2 b.2.5.5 (A:317-568) STAT-1, DNA-binding domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 252
Score = 26.7 bits (59), Expect = 2.3
Identities = 21/88 (23%), Positives = 28/88 (31%), Gaps = 5/88 (5%)
Query: 25 WASASLKPAFPDVAGDPFFAAPDPLAPAPQISETLNPSFGSSSNPTYPDLGYTSLDFDTR 84
WAS + F P A Q+SE L+ F S + G +
Sbjct: 152 WASILWYNMLVAEPRNLSFFLTPPCARWAQLSEVLSWQFSSVTK-----RGLNVDQLNML 206
Query: 85 GLDVLRGNAELSSPEECARACREGEPPK 112
G +L NA R C+E K
Sbjct: 207 GEKLLGPNASPDGLIPWTRFCKENINDK 234
>d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 200
Score = 26.3 bits (57), Expect = 3.2
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Query: 165 PGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPI-------- 216
G ++ V + V + G + H HG + + + P+
Sbjct: 68 AGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLG 127
Query: 217 TQGNTFRYQFTA-NAGTHFWHAH 238
G+ +F N G F+H H
Sbjct: 128 VTGDEVTIRFVTDNPGPWFFHCH 150
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 25.0 bits (53), Expect = 4.0
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 163 MLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTF 222
+L + V EG + + + + ++ + + + T ++
Sbjct: 4 LLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITN-ATVEDSG 62
Query: 223 RYQFTA 228
Y T
Sbjct: 63 TYYCTG 68
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.6 bits (55), Expect = 4.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 99 EECARACREGEPPKLCYYHFT 119
EC R R + + Y+HFT
Sbjct: 155 VECFRGKRRDQQQRPLYHHFT 175
>d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 190
Score = 25.6 bits (55), Expect = 4.9
Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 9/83 (10%)
Query: 165 PGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPI-------- 216
P V V + G + H HG + + + P+
Sbjct: 67 LLPGGAVISLPANQVIEISIPGGGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIG 126
Query: 217 TQGNTFRYQFTA-NAGTHFWHAH 238
G+ ++F N G F H H
Sbjct: 127 GGGDNVTFRFVTDNPGPWFLHCH 149
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 157
Score = 25.3 bits (54), Expect = 5.1
Identities = 7/67 (10%), Positives = 11/67 (16%)
Query: 173 EGDRVVVDVRNSMDGLENTIHWHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGT 232
E V+D S + + I R T
Sbjct: 18 EPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERLGTAERYVLTCGSSLLARFAVAE 77
Query: 233 HFWHAHT 239
+
Sbjct: 78 VQALSGK 84
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 91
Score = 24.5 bits (53), Expect = 6.1
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 96 SSPEECARACREGEPPKL 113
++ ++CA C +
Sbjct: 30 NTADQCANRCTRNKGLPF 47
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 24.1 bits (51), Expect = 7.7
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 163 MLPGPSIQVCEGDRVVVDVRNSMDGLENTIHWHGIHQ 199
+L P ++ EG+ +V+ + D + + +
Sbjct: 4 VLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGK 40
>d1esoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Escherichia
coli [TaxId: 562]}
Length = 154
Score = 24.6 bits (53), Expect = 8.4
Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 179 VDVRNSMDGLENTIH-WHGIHQRGTQYSDGVPFVTQCPITQGNTFRYQFTANAGTHFWHA 237
++ + L H +H IH +G+ + G Q T
Sbjct: 31 LEFSPDLKALPPGEHGFH-IHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAG 89
Query: 238 HTG 240
H G
Sbjct: 90 HLG 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.430
Gapped
Lambda K H
0.267 0.0577 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 943,126
Number of extensions: 42538
Number of successful extensions: 214
Number of sequences better than 10.0: 1
Number of HSP's gapped: 176
Number of HSP's successfully gapped: 43
Length of query: 246
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 163
Effective length of database: 1,268,006
Effective search space: 206684978
Effective search space used: 206684978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.1 bits)