Query         psy12122
Match_columns 412
No_of_seqs    165 out of 595
Neff          4.4 
Searched_HMMs 29240
Date          Fri Aug 16 19:17:11 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy12122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12122hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2qkb_A Ribonuclease H1, HS-RNA  98.5 3.5E-08 1.2E-12   86.3   3.6   46   24-73    107-152 (154)
  2 1jl1_A Ribonuclease HI; RNAse   98.5 3.2E-08 1.1E-12   87.0   3.1   46   24-73     99-144 (155)
  3 3h08_A RNH (ribonuclease H); R  98.5 2.7E-08 9.3E-13   86.0   2.0   45   24-72    100-144 (146)
  4 3qio_A GAG-POL polyprotein; RN  98.5 3.9E-08 1.3E-12   86.8   2.2   46   24-72    102-147 (150)
  5 2e4l_A Ribonuclease HI, RNAse   98.5 6.8E-08 2.3E-12   85.3   3.3   45   24-72    101-145 (158)
  6 3p1g_A Xenotropic murine leuke  98.3 2.1E-07 7.2E-12   83.7   2.5   47   24-73    106-157 (165)
  7 2kq2_A Ribonuclease H-related   98.3 1.2E-07 4.1E-12   83.0   0.8   30   43-73    109-138 (147)
  8 1ril_A Ribonuclease H; hydrola  98.3 2.1E-07 7.1E-12   83.1   1.6   46   24-73    104-149 (166)
  9 2lsn_A Reverse transcriptase;   98.0 9.6E-07 3.3E-11   79.5   1.2   45   24-71    112-162 (165)
 10 1mu2_A HIV-2 RT; HIV-2 reverse  98.0 3.4E-06 1.2E-10   87.8   4.2   56   12-70    500-555 (555)
 11 2zd1_A Reverse transcriptase/r  97.9 2.9E-06 9.8E-11   88.4   1.3   55   12-69    503-557 (557)
 12 3u3g_D Ribonuclease H, RNAse H  97.1 0.00029   1E-08   58.7   3.8   55   12-71     80-136 (140)
 13 3hst_B Protein RV2228C/MT2287;  96.9 0.00074 2.5E-08   56.7   4.1   56   12-72     77-133 (141)
 14 2ehg_A Ribonuclease HI; RNAse   96.3  0.0027 9.1E-08   54.5   3.9   42   24-73     94-135 (149)

No 1  
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*
Probab=98.54  E-value=3.5e-08  Score=86.34  Aligned_cols=46  Identities=24%  Similarity=0.187  Sum_probs=37.1

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGSP   73 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~~   73 (412)
                      .+.+||.+...+   ..+..|.|.| ||||+|++|||.||+|||+|+..+
T Consensus       107 ~n~~l~~~i~~l---~~~~~v~~~~-V~~H~g~~~N~~AD~LA~~a~~~~  152 (154)
T 2qkb_A          107 INKEDFVALERL---TQGMDIQWMH-VPGHSGFIGNEEADRLAREGAKQS  152 (154)
T ss_dssp             TTHHHHHHHHHH---HTTCEEEEEE-CCTTSSCHHHHHHHHHHHHHHTCC
T ss_pred             ccHHHHHHHHHH---HcCCceEEEE-ccCCCCCHhHHHHHHHHHHHHHhc
Confidence            456899874443   3456788888 999999999999999999998754


No 2  
>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...
Probab=98.53  E-value=3.2e-08  Score=87.04  Aligned_cols=46  Identities=26%  Similarity=0.326  Sum_probs=37.7

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGSP   73 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~~   73 (412)
                      .+.++|.....+   .....|.|.| ||||+|++|||.||+|||+|+..+
T Consensus        99 ~n~~l~~~i~~l---~~~~~v~~~w-V~gH~g~~~Ne~AD~LA~~a~~~~  144 (155)
T 1jl1_A           99 KNVDLWQRLDAA---LGQHQIKWEW-VKGHAGHPENERADELARAAAMNP  144 (155)
T ss_dssp             TTHHHHHHHHHH---TTTCEEEEEE-CCSSTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHH---HccCceEEEE-cCCCCCCHHHHHHHHHHHHHHhcc
Confidence            356899874444   3456888888 999999999999999999999776


No 3  
>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}
Probab=98.50  E-value=2.7e-08  Score=86.00  Aligned_cols=45  Identities=20%  Similarity=0.204  Sum_probs=35.2

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGS   72 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~   72 (412)
                      .+.+||.....+..   ...|.|.| ||||+|++|||.||+|||+|+..
T Consensus       100 ~n~~l~~~~~~~~~---~~~v~~~~-V~gH~g~~~N~~AD~LA~~a~~~  144 (146)
T 3h08_A          100 ENIDLWQEILKLTT---LHRVTFHK-VKGHSDNPYNSRADELARLAIKE  144 (146)
T ss_dssp             TTHHHHHHHHHHHH---HSEEEEEE-CCC-CCSHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHh---hCceEEEE-cCCcCCcHhHHHHHHHHHHHHHh
Confidence            45789988554433   35688887 99999999999999999999753


No 4  
>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A
Probab=98.47  E-value=3.9e-08  Score=86.78  Aligned_cols=46  Identities=20%  Similarity=0.189  Sum_probs=36.4

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGS   72 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~   72 (412)
                      .+.+||.+...+  ......|.+.| ||||+|++|||.||+|||+|+..
T Consensus       102 ~n~~l~~~l~~~--l~~~~~v~~~w-V~gH~g~~~Ne~AD~LA~~a~~~  147 (150)
T 3qio_A          102 KNVDLVNQIIEQ--LIKKEKVYLAW-VPAHKGIGGNEQVDKLVSAGIRK  147 (150)
T ss_dssp             -CHHHHHHHHHH--HTTCSEEEEEE-CCTTSCCHHHHHHHHHHHTTTSC
T ss_pred             ccHHHHHHHHHH--HhhcCceEEEE-ccCcCCChhHHHHHHHHHHHHHH
Confidence            568899863222  23567899888 99999999999999999999865


No 5  
>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A
Probab=98.45  E-value=6.8e-08  Score=85.35  Aligned_cols=45  Identities=20%  Similarity=0.237  Sum_probs=36.9

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGS   72 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~   72 (412)
                      .+.+||.....+   .....|.|.| ||||+|++|||.||+|||+|+..
T Consensus       101 ~n~~l~~~i~~l---~~~~~v~~~w-V~gH~g~~~Ne~AD~LAk~a~~~  145 (158)
T 2e4l_A          101 KNVDLWKRLDKA---AQLHQIDWRW-VKGHAGHAENERCDQLARAAAEA  145 (158)
T ss_dssp             TTHHHHHHHHHH---HTTSEEEEEE-CCTTCCCHHHHHHHHHHHHHHHS
T ss_pred             cCHHHHHHHHHH---HccCcEEEEE-ccCCCCchhHHHHHHHHHHHHHh
Confidence            456899874443   3446888887 99999999999999999999876


No 6  
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A
Probab=98.29  E-value=2.1e-07  Score=83.68  Aligned_cols=47  Identities=19%  Similarity=0.084  Sum_probs=37.2

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCC-----CCCChHHhHHHhhccCCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVG-----IAGNEAADREAKSTLGSP   73 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsG-----I~GNE~ADrLAKeAa~~~   73 (412)
                      .+.+||.+..  .....+.+|.|.| ||||+|     ++|||+||+|||+|+..+
T Consensus       106 ~n~dl~~~l~--~~l~~~~~v~~~w-VkgH~g~~~~~~~gNe~AD~LA~~aa~~~  157 (165)
T 3p1g_A          106 KNKNEILALL--KALFLPKRLSIIH-CPGHQKGNSAEARGNRMADQAAREAAMKA  157 (165)
T ss_dssp             SSHHHHHHHH--HHTTSBSEEEEEE-CCSSCCSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHH--HHHhcCCceEEEE-ecCCCCCCcCcchHHHHHHHHHHHHHhcC
Confidence            3678898721  2223567899988 999999     999999999999998765


No 7  
>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A
Probab=98.29  E-value=1.2e-07  Score=82.97  Aligned_cols=30  Identities=33%  Similarity=0.310  Sum_probs=28.3

Q ss_pred             CCeEEEEecCCCCCCCChHHhHHHhhccCCC
Q psy12122         43 SPKYGKVSYNHVGIAGNEAADREAKSTLGSP   73 (412)
Q Consensus        43 ~I~liWWVPGHsGI~GNE~ADrLAKeAa~~~   73 (412)
                      .|.|.| ||||+|++|||.||+|||+|+...
T Consensus       109 ~v~~~w-V~gH~g~~~Ne~AD~LA~~a~~~~  138 (147)
T 2kq2_A          109 IYSFEK-VKAHSGNEFNDYVDMKAKSALGIR  138 (147)
T ss_dssp             TCCBCC-CCCCCCCHHHHHHHHHHHHHHTCC
T ss_pred             CeeEEE-ecCcCCCcchHHHHHHHHHHHhcc
Confidence            889888 999999999999999999999876


No 8  
>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A
Probab=98.25  E-value=2.1e-07  Score=83.08  Aligned_cols=46  Identities=26%  Similarity=0.403  Sum_probs=37.6

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGSP   73 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~~   73 (412)
                      .+.++|.....+.   ....|.|.| ||||+|++|||.||+|||+|+...
T Consensus       104 ~n~~l~~~i~~l~---~~~~v~~~w-V~gH~g~~~Ne~AD~LAk~a~~~~  149 (166)
T 1ril_A          104 KNRDLWEALLLAM---APHRVRFHF-VKGHTGHPENERVDREARRQAQSQ  149 (166)
T ss_dssp             TTHHHHHHHHHHH---TTSEEECCC-CCGGGSCTHHHHHHHHHHHHHTSS
T ss_pred             CcHHHHHHHHHHH---hcCeEEEEE-eeCCCCchhHHHHHHHHHHHHHHh
Confidence            3567998754443   345788887 999999999999999999999876


No 9  
>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}
Probab=98.03  E-value=9.6e-07  Score=79.55  Aligned_cols=45  Identities=18%  Similarity=0.111  Sum_probs=35.2

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCC------CCChHHhHHHhhccC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGI------AGNEAADREAKSTLG   71 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI------~GNE~ADrLAKeAa~   71 (412)
                      .+.|||.....+  ......|+|.| ||||+|+      +|||+||+||++|+.
T Consensus       112 kN~dL~~~l~~~--~~~~~~v~~~~-VkgH~g~~~~~~~~gNe~AD~LA~~gA~  162 (165)
T 2lsn_A          112 KHISKWKSIAEC--LSMKPDITIQH-EKGHQPTNTSIHTEGNALADKLATQGSY  162 (165)
T ss_dssp             SSHHHHHHHHHH--HHHCTTCEEEE-CCSSSCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH--HhCCCCEEEEE-EeCCCCccCCCCChHHHHHHHHHHHhhh
Confidence            467999873332  24456899998 9999996      589999999999873


No 10 
>1mu2_A HIV-2 RT; HIV-2 reverse transcriptase, AIDS, polymerase, drug design, transferase; 2.35A {Human immunodeficiency virus 2} SCOP: c.55.3.1 e.8.1.2 PDB: 1mu2_B
Probab=97.97  E-value=3.4e-06  Score=87.80  Aligned_cols=56  Identities=16%  Similarity=0.205  Sum_probs=41.5

Q ss_pred             HHHHHHhcCCCCCCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhcc
Q psy12122         12 VVLREIKGAPRRPPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTL   70 (412)
Q Consensus        12 ~~l~~i~~~~~~~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa   70 (412)
                      .|++.|.+-....++++|.+...+.  ..+..|.+.| ||||+|++|||.||+|||+|+
T Consensus       500 ~v~~~i~~~~~~~~~~l~~~~~~~~--~~~~~v~~~w-V~~H~g~~~Ne~AD~LA~~a~  555 (555)
T 1mu2_A          500 YVMGIVASQPTESESKIVNQIIEEM--IKKEAIYVAW-VPAHKGIGGNQEVDHLVSQGI  555 (555)
T ss_dssp             HHHHHHHTCCSEESCHHHHHHHHHH--HHCSEEEEEE-CCSSSCCTTHHHHHHHHHTTC
T ss_pred             HHHHHHhcccccccHHHHHHHHHHh--ccCCcEEEEE-EECCCCChhHHHHHHHHHhhC
Confidence            3556666544456778887633332  3456788888 999999999999999999985


No 11 
>2zd1_A Reverse transcriptase/ribonuclease H; P51/P66, hetero dimer, NNRTI, nonnucleoside inhibitor, AIDS, HIV, rilpivirine, diarylpyrimidine, DAPY, DNA recombination; HET: T27; 1.80A {Human immunodeficiency virus 1} PDB: 3is9_A* 3irx_A* 2ze2_A* 3bgr_A* 3qlh_A* 3klf_A* 3qo9_A* 1dlo_A 1bqm_A 2be2_A* 1s6q_A* 1s6p_A* 1s9g_A* 1suq_A* 2b5j_A* 2b6a_A* 2ban_A* 1s9e_A* 1hni_A* 1hnv_A* ...
Probab=97.86  E-value=2.9e-06  Score=88.37  Aligned_cols=55  Identities=22%  Similarity=0.261  Sum_probs=39.3

Q ss_pred             HHHHHHhcCCCCCCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhc
Q psy12122         12 VVLREIKGAPRRPPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKST   69 (412)
Q Consensus        12 ~~l~~i~~~~~~~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeA   69 (412)
                      .|++.|.+-+...+.++|.+.....  .....|.+.| ||||+|++|||+||+|||+|
T Consensus       503 ~vi~~i~~~~~~~~~~l~~~~~~~l--~~~~~v~~~w-V~~H~g~~~Ne~AD~LA~~a  557 (557)
T 2zd1_A          503 YALGIIQAQPDKSESELVNQIIEQL--IKKEKVYLAW-VPAHKGIGGNEQVDKLVSAG  557 (557)
T ss_dssp             HHHHHHTTCCSEESSHHHHHHHHHH--HHCSEEEEEE-CCSSSCCTTCCGGGGCC---
T ss_pred             HHHHHHhcCCccCCHHHHHHHHHHH--hcCCCEEEEE-cCCCCCChhHHHHHHHHhcC
Confidence            4667777766555788997532222  3345799988 99999999999999999986


No 12 
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=97.12  E-value=0.00029  Score=58.73  Aligned_cols=55  Identities=11%  Similarity=0.170  Sum_probs=36.9

Q ss_pred             HHHHHHhcCCCCCCcchHhhhhhhhhh-cCC-CCCeEEEEecCCCCCCCChHHhHHHhhccC
Q psy12122         12 VVLREIKGAPRRPPKSLWGQKTNLIFF-LCP-KSPKYGKVSYNHVGIAGNEAADREAKSTLG   71 (412)
Q Consensus        12 ~~l~~i~~~~~~~~~~lw~~~~nli~~-~s~-~~I~liWWVPGHsGI~GNE~ADrLAKeAa~   71 (412)
                      .|++.|.+.-...+.++|.-...+... ..+ ..|+|.| ||+    +|||.||+|||+|+.
T Consensus        80 ~vi~~i~~~~~~~~~~l~~~~~~i~~l~~~~~~~v~~~~-V~~----~~N~~AD~LA~~a~~  136 (140)
T 3u3g_D           80 LIVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVH-IPR----EKNARADELVNEAID  136 (140)
T ss_dssp             HHHHHHTTSSCCCCGGGHHHHHHHHHHHHHHCTTCEEEE-CCG----GGGHHHHHHHHHHHH
T ss_pred             HHHHHhCCCcccCCHHHHHHHHHHHHHhhcCCCcEEEEE-cCc----hhhHHHHHHHHHHHH
Confidence            455566654334456777644444433 233 5899988 994    999999999999864


No 13 
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=96.87  E-value=0.00074  Score=56.72  Aligned_cols=56  Identities=18%  Similarity=0.140  Sum_probs=37.2

Q ss_pred             HHHHHHhcCCCCCCcchHhhhhhhhhhcC-CCCCeEEEEecCCCCCCCChHHhHHHhhccCC
Q psy12122         12 VVLREIKGAPRRPPKSLWGQKTNLIFFLC-PKSPKYGKVSYNHVGIAGNEAADREAKSTLGS   72 (412)
Q Consensus        12 ~~l~~i~~~~~~~~~~lw~~~~nli~~~s-~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~   72 (412)
                      .|++.|.+.-...+.++|.-...+..... ...|++.| ||+    +|||.||+|||+|+..
T Consensus        77 ~vv~~i~~~~~~~~~~l~~~~~~i~~l~~~~~~v~~~~-V~~----~~N~~AD~LA~~a~~~  133 (141)
T 3hst_B           77 LVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEW-VPR----ARNTYADRLANDAMDA  133 (141)
T ss_dssp             HHHHHHTTSSCCCSHHHHHHHHHHHHHHTTSSEEEEEE-CCG----GGCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccCCHHHHHHHHHHHHHHhcCCeEEEEE-cCC----cccHHHHHHHHHHHHH
Confidence            35556665323345668765443433333 36788887 995    9999999999998654


No 14 
>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A
Probab=96.30  E-value=0.0027  Score=54.46  Aligned_cols=42  Identities=17%  Similarity=0.036  Sum_probs=31.0

Q ss_pred             CCcchHhhhhhhhhhcCCCCCeEEEEecCCCCCCCChHHhHHHhhccCCC
Q psy12122         24 PPKSLWGQKTNLIFFLCPKSPKYGKVSYNHVGIAGNEAADREAKSTLGSP   73 (412)
Q Consensus        24 ~~~~lw~~~~nli~~~s~~~I~liWWVPGHsGI~GNE~ADrLAKeAa~~~   73 (412)
                      ..+++|.....+....   +|.+.| ||+    ++||.||+|||+|+...
T Consensus        94 ~~~~l~~~i~~l~~~~---~v~~~~-V~~----~~N~~AD~LA~~a~~~~  135 (149)
T 2ehg_A           94 RIIPLYEKAIELKKKL---NATLIW-VPR----EENKEADRLSRVAYELV  135 (149)
T ss_dssp             THHHHHHHHHHHHHHH---TCEEEE-CCG----GGCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC---CEEEEE-cCC----cccHHHHHHHHHHHHhh
Confidence            4567787755444322   599988 999    59999999999987543


Done!