BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12124
(115 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 115 bits (288), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEE-DDEAMQKELRE 60
+ IL ++G K + +LI+E D +G ++FD F + A+F+ EE + E MQ+ELRE
Sbjct: 36 IGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELRE 95
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
AFRLYDK+GNGYI T ++EIL ELD+ L++E+LD MIDEID+DGSGTVDF+
Sbjct: 96 AFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 147
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 56 KELREAFRLYDK-DGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
K L AFR ++ +G+G + T + IL L Q T + +IDE D G+G +DFD
Sbjct: 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFD 70
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 1 MVADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
++ +IL + + + + LD +I+E+DAD SG ++F+EF+
Sbjct: 112 VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 95.5 bits (236), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+++ + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 409 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +D++I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 409 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 334 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 390
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 391 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 410 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 409 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 39 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 95
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 96 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 69
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 112 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 33 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 89
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 37 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 93
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 94 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 67
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 110 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 296 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 352
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 353 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 372 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 299 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 355
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 375 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 41 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 97
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 98 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 114 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 33 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 89
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 31 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 87
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 88 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 104 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 92.4 bits (228), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 299 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 355
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 375 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 92.0 bits (227), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 32 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 88
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 89 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 105 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 34 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 90
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 91 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 107 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 409 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 92.0 bits (227), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 33 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 89
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 90 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 91.7 bits (226), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSE---EEIREA 388
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 408 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 91.7 bits (226), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 53/59 (89%)
Query: 54 MQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
MQ+ELREAFRLYDK+GNGYI T ++EIL ELD+ L++E+LD MIDEID+DGSGTVDF+
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 59
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 1 MVADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
++ +IL + + + + LD +I+E+DAD SG ++F+EF+
Sbjct: 24 VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 91.7 bits (226), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L + LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 91.7 bits (226), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L + LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E + DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E + D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD G ++F EF+T+ A+ + D E +E+REA
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSE---EEIREA 388
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 408 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD G ++F EF+T+ A+ + D E +E+REA
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSE---EEIREA 388
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 408 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD G ++F EF+T+ A+ + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 409 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 75/108 (69%), Gaps = 4/108 (3%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E E+REAFR+
Sbjct: 31 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE----EIREAFRV 86
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ ++ L ++LT+EE+D MI E + DG G V+++
Sbjct: 87 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E + D G++ ++EFV +
Sbjct: 103 VMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 93 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 109 VMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD G ++F EF+ + A+ + + D E +E+REA
Sbjct: 324 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSE---EEIREA 380
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 381 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 4 DILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 399 HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 89.0 bits (219), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+ L A+ + + D E +EL+EAFR+
Sbjct: 32 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRV 88
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 89 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 105 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 89.0 bits (219), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+ L A+ + + D E +EL+EAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 88.6 bits (218), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+A ++R + Q ++ L ++I EVDAD +G +EFDEF++L AK + + D E +EL+EA
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAE---EELKEA 88
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
F+++DKD NGYI S L+ ++ L ++LT+EE++ MI E D DG G V+++
Sbjct: 89 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+EAF L+DKDG+G I L ++R LD T EEL MI E+D+DG+GT++FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+ L A+ + + D E ++L+EAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EKLKEAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 92 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + ++E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDS-----EEEIREAFRV 89
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG+I + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 90 FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFVT+
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+ L A+ + + D E +EL+EAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKD NG+I + L+ ++ L ++LT+EE+D MI E D DG G +++D
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYD 140
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ +DEFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EV AD +G ++F +F+T+ A+ + + D E +E+REA
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSE---EEIREA 389
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++ KDGNGYI + L+ ++ L ++LT+EE+D MI E DG G V+++
Sbjct: 390 FRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYE 440
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+ +DG+GT+DF
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 85.1 bits (209), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF+ L A+ + + D E +EL+EAFR+
Sbjct: 36 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSE---EELKEAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKD NG+I + L+ ++ L ++LT+EE+D MI E D DG G ++++
Sbjct: 93 FDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
+ R +GQ + L + I EVDAD +G ++F EF+T A+ + D E +E+REAFR+
Sbjct: 36 VXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSE---EEIREAFRV 92
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ + L ++LT+EE+D I E D DG G V+++
Sbjct: 93 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L + R L T EL I+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF++L A+ + E+D E +EL EAF++
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE---EELIEAFKV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+D+DGNG I + L+ ++ L ++LT++E+D MI E D DG G ++++
Sbjct: 92 FDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ +DE+I E D D G + ++EFV +
Sbjct: 108 VMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L ++I EVDAD +G ++F EF++L A+ + E+D E +EL EAF++
Sbjct: 35 VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE---EELIEAFKV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+D+DGNG I + L+ ++ L ++LT++E+D MI E D DG G ++++
Sbjct: 92 FDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 139
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ +DE+I E D D G + ++EFV +
Sbjct: 108 VMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
+ R +GQ + L + I EVDAD +G ++F EF+T A+ + D E +E+REAFR+
Sbjct: 35 VXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ + L ++LT+EE+D I E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L + R L T EL I+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+G+ + +DE I E D D G++ ++EFV
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R +GQ + L +++ E+D D +G ++F EF+ + A+ + + D+E +E+REAFR+
Sbjct: 35 VMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNG++ + L+ ++ L ++L++EE+D MI D+DG G V+++
Sbjct: 92 FDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL M+ EID DG+GTVDF
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + + +DE+I D D G++ ++EFV +
Sbjct: 108 VMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRV 144
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
+ R +G + L + I EVDAD +G + F EF+T A+ + D E +E+REAFR+
Sbjct: 35 VXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSE---EEIREAFRV 91
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDGNGYI + L+ + L ++LT+EE+D I E D DG G V+++
Sbjct: 92 FDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L + R L T EL I+E+D+DG+GT++F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+G+ + +DE I E D D G++ ++EFV
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 79.3 bits (194), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 70/108 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL E FR+
Sbjct: 42 VMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRI 101
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+D++ +GYI L EI R + +T+EE++ ++ + D + G +DFD
Sbjct: 102 FDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 112 D 112
+
Sbjct: 73 E 73
Score = 28.9 bits (63), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+A+I R G+ + ++ L+++ D + GR++FDEF+ +
Sbjct: 115 LAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 70/108 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL E FR+
Sbjct: 42 VMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRI 101
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+D++ +GYI L EI R + +T+EE++ ++ + D + G +DFD
Sbjct: 102 FDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 112 D 112
+
Sbjct: 73 E 73
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+A+I R G+ + ++ L+++ D + GR++FDEF+ +
Sbjct: 115 LAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 73/111 (65%), Gaps = 3/111 (2%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L +LI E + + +G+L F EF + AK + E D E +E+REA
Sbjct: 32 LGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE---EEMREA 88
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
F+++D+DG+G+I + L+ ++ L +++T+EE+D MI E D DG G ++++
Sbjct: 89 FKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++AF +DK+G G I T L ++R L T EL +I E +++ +G ++F
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+G+ + +DE+I E D D G + ++EFV + ++
Sbjct: 112 LGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 70/108 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL + FR+
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRI 104
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +G+I L EILR + +T E+++ ++ + D + G +DFD
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 70/108 (64%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL + FR+
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRI 104
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +G+I L EILR + +T E+++ ++ + D + G +DFD
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL FR+
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRI 104
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +G+I L EILR + +T E+++ ++ + D + G +DFD
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 118 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL FR+
Sbjct: 42 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRI 101
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +G+I L EILR + +T E+++ ++ + D + G +DFD
Sbjct: 102 FDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 149
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 72
Query: 112 D 112
+
Sbjct: 73 E 73
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 115 LGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 154
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 68/108 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + + + E+ ++EL FR+
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRI 104
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +G+I L EILR + + E+++ ++ + D + G +DFD
Sbjct: 105 FDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 152
Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 118 LGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+A ++R +G ++ +++L+ E+D D + ++EF EF+ L ++ + D E +EL EA
Sbjct: 33 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE---QELLEA 89
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
F+++DK+G+G I + LK +L + ++LT+ E+D M+ E+ SDGSG ++
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 137
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKD NG I +S L ++R L + E++ +++EID DG+ ++F
Sbjct: 12 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+A ++R +G ++ +++L+ E+D D + ++EF EF+ L ++ + D E +EL EA
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE---QELLEA 88
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
F+++DK+G+G I + LK +L + ++LT+ E+D M+ E+ SDGSG ++
Sbjct: 89 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 136
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKD NG I +S L ++R L + E++ +++EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 71/109 (65%), Gaps = 4/109 (3%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+A ++R +G ++ + +L+ E+D D + +EF EF+ L ++ + D E +EL EA
Sbjct: 33 LATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSE---QELLEA 89
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
F+++DK+G+G I + LK +L + ++LT+ E+D M+ E+ SDGSG ++
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEIN 137
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKD +G I S L ++R L + E+ +++EID DG+ ++F
Sbjct: 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLY 65
+R +G K+ + ++I E+D + +G++ F +F+T+ + + E+D ++E+ +AF+L+
Sbjct: 32 MRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKD---TKEEILKAFKLF 88
Query: 66 DKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
D D G I LK + +EL + LT+EEL MIDE D DG G V
Sbjct: 89 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG G I LK +R L + EE+ MI EID +G+G ++F
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLY 65
+R +G K+ + ++I ++D D SG ++F+EF+ + + E D ++E+ +AFRL+
Sbjct: 34 MRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDS---REEIMKAFRLF 90
Query: 66 DKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
D D G I LK + +EL + +T+EEL MIDE D DG G V+
Sbjct: 91 DDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG+G I LK +R L + EE+ MI +ID DGSGT+DF
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 112 D 112
+
Sbjct: 64 E 64
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 70/111 (63%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDL 100
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL + FR+
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRM 103
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL + FR+
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 104 WDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 70/111 (63%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDL 100
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 101 FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL + FR+
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 69/108 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL + FR+
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 58
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 27 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 34 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 33 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 30 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 31 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 30 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL-AAKFIVEEDDEAMQKELRE 60
+ + +R MG + L EL ++++ + G ++FD+FV L K + E D KELR+
Sbjct: 47 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRD 106
Query: 61 AFRLYDKDGNGYIPTSCLKEILRE-LDDQLTNEELDGMIDEIDSDGSGTVDFD 112
AFR +D +G+G I TS L+E +R+ L Q+ + +++ +I ++D +G G VDF+
Sbjct: 107 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 159
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ELREAFR +DKD +GYI L +R + T EL + +I+ + G VDFD
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 7 RLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+L+G + ++E+I +VD + GR++F+EFV + ++
Sbjct: 130 KLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL-AAKFIVEEDDEAMQKELRE 60
+ + +R MG + L EL ++++ + G ++FD+FV L K + E D KELR+
Sbjct: 33 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRD 92
Query: 61 AFRLYDKDGNGYIPTSCLKEILRE-LDDQLTNEELDGMIDEIDSDGSGTVDFD 112
AFR +D +G+G I TS L+E +R+ L Q+ + +++ +I ++D +G G VDF+
Sbjct: 93 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 145
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ELREAFR +DKD +GYI L +R + T EL + +I+ + G VDFD
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 7 RLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+L+G + ++E+I +VD + GR++F+EFV + ++
Sbjct: 116 KLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR++DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ +++FV +
Sbjct: 32 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL-AAKFIVEEDDEAMQKELRE 60
+ + +R MG + L EL ++++ + G ++FD+FV L K + E D KELR+
Sbjct: 33 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRD 92
Query: 61 AFRLYDKDGNGYIPTSCLKEILRE-LDDQLTNEELDGMIDEIDSDGSGTVDFD 112
AFR +D +G+G I TS L+E +R L Q+ + +++ +I ++D +G G VDF+
Sbjct: 93 AFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFE 145
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ELREAFR +DKD +GYI L +R + T EL + +I+ + G VDFD
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 8 LMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
L+G + ++E+I +VD + GR++F+EFV + ++
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REAFR++DKDGNGYI +
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREAFRVFDKDGNGYISAAE 59
Query: 78 LKEILREL 85
L+ ++ L
Sbjct: 60 LRHVMTNL 67
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 93 ELDGMIDEIDSDGSGTVDF 111
EL MI+E+D+DG+GT+DF
Sbjct: 2 ELQDMINEVDADGNGTIDF 20
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 68/108 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
++R++GQ + L E+I+EVD D SG ++FDEF+ + + + ++ ++EL + FR+
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 104 XDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 120 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+REAFR+ DKDGNGYI + L+ ++ L ++LT+EE+D MI E D DG G V+++
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 54 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLY 65
+R +G K+ + ++I E+D D SG ++F+EF+T+ + E D ++E+ +AFRL+
Sbjct: 54 MRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS---REEILKAFRLF 110
Query: 66 DKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
D D +G I L+ + +EL + LT EEL MI E D + +D D
Sbjct: 111 DDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 157
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG+G I LK +R L + EE+ MI EID DGSGT+DF
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 112 D 112
+
Sbjct: 84 E 84
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL+EAFR+ DK+ G I L+ IL+ L D+LT +E++ MI E D+DGSGTVD++
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE 63
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
IL+ +G + ++ +I E D D SG ++++EF L
Sbjct: 32 ILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+A ++R +G ++ +++L+ E+D D + ++EF EF+ L ++ + D E +EL EA
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE---QELLEA 88
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELD 95
F+++DK+G+G I + LK +L + ++LT+ EL+
Sbjct: 89 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKD NG I +S L ++R L + E++ +++EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + +
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL+EAFR++DKD NG+I + L+ ++ L ++LT+EE+D MI E D DG G ++++
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 23/37 (62%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ + +DE+I E D D G++ ++EFV +
Sbjct: 29 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 44/58 (75%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL+EAF+++DKD NGYI S L+ ++ L ++LT+EE++ MI E D DG G V+++
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 44/58 (75%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL+EAF+++DKD NGYI S L+ ++ L ++LT+EE++ MI E D DG G V+++
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+ + + D E +E+REA
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSE---EEIREA 88
Query: 62 FR 63
FR
Sbjct: 89 FR 90
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF LYDKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
+ ++R +G + L ++I EVDAD +G ++F EF+T+ A+ +
Sbjct: 32 LGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARIM 76
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+EAF L+DKDG+G I L ++R LD T EEL MI E+D+DG+GT++FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+A ++R + Q ++ L ++I EVDAD +G +EFDEF++L AK
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ +EAF L+DKDG+G I L ++R LD T EEL MI E+D+DG+GT++FD
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+A ++R + Q ++ L ++I EVDAD +G +EFDEF++L AK
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAK 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG+GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD +G ++F EF+ L A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 74
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKDG+G I T L ++R L T EL MI+E+D+DG GT+DF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R +GQ + L ++I EVDAD G ++F EF+T+ A+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMAR 74
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
+D L+ +D D SG +E+ EF+ A + E M++ AF+++DKDG+G I T
Sbjct: 383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMER----AFKMFDKDGSGKISTKE 438
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L ++ + D + EEL+ +I+++D++ G VDF+
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN 473
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEE 49
L+ +IE+VD +K G ++F+EFV + F+ E
Sbjct: 455 LESIIEQVDNNKDGEVDFNEFVEMLQNFVRNE 486
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 16 KILDELIEEVDADKSGRLEFDEFVTLAAKF----------IVEEDDEAMQKELREAFRLY 65
K L E+ ++D + G L+ DE V +F +++ + ++ ++ L
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL 390
Query: 66 DKDGNGYIPTSCLKEILRELDDQ---LTNEELDGMIDEIDSDGSGTV 109
D DG+G I S E + D+ L+ E ++ D DGSG +
Sbjct: 391 DMDGSGSIEYS---EFIASAIDRTILLSRERMERAFKMFDKDGSGKI 434
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 64
Query: 112 D 112
+
Sbjct: 65 E 65
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ ++R++GQ K+ LD +IEEVD D SG ++F+EF+ + +
Sbjct: 31 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E M E + AF ++D DG G I T L ++R L T EELD +I+E+D DGSGT+DF
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 112 D 112
+
Sbjct: 76 E 76
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ K+ LD +IEEVD D SG ++F+EF+ + +
Sbjct: 45 VMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG+G I LK +R L + EE+ MI EID DGSGT+DF
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 112 D 112
+
Sbjct: 86 E 86
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+R +G K+ + ++I E+D D SG ++F+EF+T+
Sbjct: 56 MRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRL 64
+L+ G +E+ E DA +G+++F EF+++ + + + E + LR+AFR
Sbjct: 31 VLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDI---LRQAFRT 87
Query: 65 YDKDGNGYIPTSCLKEILRELDDQLTNEEL 94
+D +G GYIP + L++ L L D+L E
Sbjct: 88 FDPEGTGYIPKAALQDALLNLGDRLKPHEF 117
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+D + G+I L+ +L++ ++ + M +E D+ G+G + F
Sbjct: 7 EFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLY 65
++ +G K+ + +LI+E D++ +++D+F + + I++ D E++ AF+L+
Sbjct: 49 MKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDP---LDEIKRAFQLF 105
Query: 66 DKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
D D G I L+ + +EL + LT+EEL MI+E D DG G ++
Sbjct: 106 DDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+ EAF L+D + +G++ LK ++ L +L E+ +IDE DS+G + +
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 112 D 112
D
Sbjct: 79 D 79
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 43/58 (74%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL EAF+++D+DGNG I + L+ ++ L ++LT++E+D MI E D DG G ++++
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
++ +G+ +DE+I E D D G + ++EFV +
Sbjct: 33 VMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 42 AAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEI 101
A F+ EE M E + AF ++D DG G I T L ++R L T ELD +I E+
Sbjct: 10 ARAFLSEE----MIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEV 65
Query: 102 DSDGSGTVDFD 112
D DGSGT+DF+
Sbjct: 66 DEDGSGTIDFE 76
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ K LD +I EVD D SG ++F+EF+ + +
Sbjct: 45 VMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMVR 84
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 26 DADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILREL 85
D + +G+ F +F+T+ + E+D ++E+ +AF+L+D D G I LK + +EL
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKD---TKEEILKAFKLFDDDETGKISFKNLKRVAKEL 133
Query: 86 DDQLTNEELDGMIDEIDSDGSGTV 109
+ LT+EEL IDE D DG G V
Sbjct: 134 GENLTDEELQEXIDEADRDGDGEV 157
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG G I LK R L + EE+ I EID +G+G +F
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 33 LEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNE 92
+ F +F+T+ + + E+D ++E+ +AF+L+D D G I LK + +EL + LT+E
Sbjct: 1 MNFGDFLTVMTQKMSEKD---TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE 57
Query: 93 ELDGMIDEIDSDGSGTV 109
EL MIDE D DG G V
Sbjct: 58 ELQEMIDEADRDGDGEV 74
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +D +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ + L E+I+EVD D SG ++FDEF+ + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
+D++++ VD DK+G +E+ EFVT+A ++ ++ L AFR++D D +G I ++
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTE 439
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L I D + +E ++ E+D + G VDFD
Sbjct: 440 LATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 472
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 50 DDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
D A++ E+ + D D NGYI S + + L+ E L+ DSD SG +
Sbjct: 376 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 435
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
+D++++ VD DK+G +E+ EFVT+A ++ ++ L AFR++D D +G I ++
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTE 462
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L I D + +E ++ E+D + G VDFD
Sbjct: 463 LATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 495
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 50 DDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
D A++ E+ + D D NGYI S + + L+ E L+ DSD SG +
Sbjct: 399 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 458
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
+D++++ VD DK+G +E+ EFVT+A ++ ++ L AFR++D D +G I ++
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEFVTVA----MDRKTLLSRERLERAFRMFDSDNSGKISSTE 463
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L I D + +E ++ E+D + G VDFD
Sbjct: 464 LATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 496
Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 50 DDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
D A++ E+ + D D NGYI S + + L+ E L+ DSD SG +
Sbjct: 400 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 459
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTS 76
++ +I+ D D +G ++F EF+ ++F V+ D E ++LR AFR+YD D +GYI
Sbjct: 40 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKE---QKLRFAFRIYDMDKDGYISNG 96
Query: 77 CLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L ++L+ L D + +D I D DG G + F+
Sbjct: 97 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTS 76
++ +I+ D D +G ++F EF+ ++F V+ D E ++LR AFR+YD D +GYI
Sbjct: 54 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKE---QKLRFAFRIYDMDKDGYISNG 110
Query: 77 CLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L ++L+ L D + +D I D DG G + F+
Sbjct: 111 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 151
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTS 76
++ +I+ D D +G ++F EF+ ++F V+ D E ++LR AFR+YD D +GYI
Sbjct: 53 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKE---QKLRFAFRIYDMDKDGYISNG 109
Query: 77 CLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L ++L+ L D + +D I D DG G + F+
Sbjct: 110 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 150
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 7 RLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYD 66
+ +G K+ + +LI+E D++ ++D+F + + I++ D E++ AF+L+D
Sbjct: 50 KALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXGEKILKRD---PLDEIKRAFQLFD 106
Query: 67 KDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
D G I L+ + +EL + LT+EEL I+E D DG G ++
Sbjct: 107 DDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEIN 150
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+ EAF L+D + +G++ LK + L +L E+ +IDE DS+G +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 112 D 112
D
Sbjct: 79 D 79
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ + + E + AF ++ +D +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
++R++GQ + L E+I+EVD D SG ++FDEF+ + + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCM 85
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTS 76
++ +I+ D D +G ++F EF+ ++F V+ D E ++LR AFR+YD D +GYI
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKE---QKLRFAFRIYDMDKDGYISNG 95
Query: 77 CLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L ++L+ L D + +D I D DG G + F+
Sbjct: 96 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ + +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
++R++GQ + L E+I+EVD D SG ++FDEF+ + + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCM 85
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E+REAF L+D DG G I LK +R L + EE+ MI EID +G+G ++F
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 24/36 (66%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+R +G K+ + ++I E+D + +G++ F +F+T+
Sbjct: 57 MRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ + L E+I+EVD D SG ++FDEF+ + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ D L+ +G + + +L++ D DKSG +++ EF+ E +E L A
Sbjct: 32 LKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREE----NLVSA 87
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
F +DKDG+GYI +++ ++ L + +D MI EID D G +D+
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDF--GLDDIHIDDMIKEIDQDNDGQIDY 135
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
L+E F++ D D +G I LK+ L+ + +L E+ ++D D D SGT+D+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 65
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
+D++I+E+D D G++++ EF + K
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMMRK 144
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ + L E+I+EVD D SG ++FDEF+ + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
+D++++ VD DK+G +E+ EFVT+A + ++ L AFR +D D +G I ++
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEFVTVAX----DRKTLLSRERLERAFRXFDSDNSGKISSTE 439
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L I D + +E ++ E+D + G VDFD
Sbjct: 440 LATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFD 472
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 50 DDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
D A++ E+ + D D NGYI S + + L+ E L+ DSD SG +
Sbjct: 376 DASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKI 435
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 56 KELREAFRLYDKDGNGYIPTSCL----KEILR-------ELDDQLTNEELDGMIDEIDSD 104
KEL F DK+G+G + + L KE+ R LD E+D ++D +D D
Sbjct: 335 KELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFD 394
Query: 105 GSGTVDF 111
+G +++
Sbjct: 395 KNGYIEY 401
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
++R++GQ + L E+I+EVD D SG ++FDEF+ + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+E+REAF+++D+DGNG+I L +R L EL+ +I +D DG G VDF+
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+R +G N+ L+ +I+ +D D G+++F+EFVTL
Sbjct: 62 MRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
++E+ +AF+L+D D G I LK + +EL + LT+EEL MIDE D DG G V
Sbjct: 10 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
++R++GQ + L E+I+EVD D SG ++FDE++ + + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMVRCM 85
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
++R++GQ + L E+I+EVD D SG ++FDE++ + A+ +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCM 85
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L +++R L T EEL MIDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFI 46
++R++GQ + L E+I+EVD D SG ++FDEF+ + + +
Sbjct: 44 VMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCM 85
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 2 VADILRLMGQ-PFNKKILDELIE-EVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELR 59
D++R +GQ P N ++L L + D KS R++F+ F+ + + + + + ++
Sbjct: 32 CGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPML-QAVAKNRGQGTYEDYL 90
Query: 60 EAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
E FR++DK+GNG + + L+ +L L +++T EE++ ++ D +G ++++
Sbjct: 91 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYE 142
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSD--GSGTVDFD 112
E +EAF L+D+ G+G I S +++R L TN E+ ++ SD S VDF+
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFE 68
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREA 61
+ D+L MG K DE +E + ++ G + F F+T+ + + D E + +R A
Sbjct: 29 LHDMLASMG----KNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDV---IRNA 81
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
F +D++ +G+I L+E+L + D+ T+EE+D M E D G ++
Sbjct: 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNY 131
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
D++ +E +EAF + D++ +G+I L ++L + T+E L+GM+ S+ G ++
Sbjct: 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMM----SEAPGPIN 57
Query: 111 F 111
F
Sbjct: 58 F 58
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ ++L MG F + +DE+ E DK G + EF +
Sbjct: 98 LRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI 137
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E +EAF L+DKD NG I +S L ++R L + E++ +++EID DG+ ++F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 29/43 (67%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+A ++R +G ++ +++L+ E+D D + ++EF EF+ L ++
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRE-LDDQLTNEELDGMIDEIDSDGSGTVDFD 112
KELR+AFR +D +G+G I TS L+E +R+ L Q+ + +++ +I ++D +G G VDF+
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Score = 32.0 bits (71), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 7 RLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+L+G + ++E+I +VD + GR++F+EFV + ++
Sbjct: 35 KLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFD--EFVTLAAKFIVEEDDEAMQKELR 59
+ LR +G+ L+ + +++A EFD F T+ K I +++ KE+
Sbjct: 27 LGSALRSLGKNPTNAELNTIKGQLNAK-----EFDLATFKTVYRKPIKTPTEQS--KEML 79
Query: 60 EAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+AFR DK+GNG I + L+++L L D LT+ E++ ++ E+ G G ++++
Sbjct: 80 DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDS 103
+++E F+++DKD +G + L LR L TN EL+ + ++++
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNA 52
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAA--KFIVEEDDEAMQKELREAFRLYDKDGNGYIPT 75
+D ++ D D++G +++ EFVT+A K ++ +D +L AF+ +D+DGNG I
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGKISV 445
Query: 76 SCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L + D L ++ MI IDS+ G VDF+
Sbjct: 446 DELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE 480
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 16 KILDELIEEVDADKSGRLEFDEFVTLAAKFIVEE----DDEAMQKELREAFRLYDKDGNG 71
K L ++ +D + G+L+ E + +K EE D ++ E+ D D NG
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
YI S + + L+ ++L+ + D DG+G + D
Sbjct: 406 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVD 446
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAA--KFIVEEDDEAMQKELREAFRLYDKDGNGYIPT 75
+D ++ D D++G +++ EFVT+A K ++ +D +L AF+ +D+DGNG I
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGKISV 162
Query: 76 SCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L + D L ++ MI IDS+ G VDF+
Sbjct: 163 DELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE 197
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 7 RLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEE----DDEAMQKELREAF 62
+L Q K++ D + +D + G+L+ E + +K EE D ++ E+
Sbjct: 55 KLTSQEETKELTD-IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAIL 113
Query: 63 RLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
D D NGYI S + + L+ ++L+ + D DG+G + D
Sbjct: 114 GAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVD 163
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
P K ++++ E D +K G ++F E+V + + + D+ +LR F+LYD DGNG
Sbjct: 48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQ----KLRWYFKLYDVDGNG 103
Query: 72 YIPTSCLKEILREL------DDQLTNEELDGMI-DEIDSDGSG 107
I L I++ + ++ +T EE M+ D+ID +G G
Sbjct: 104 CIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDG 146
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
G+L F F+TL + + D E LR AF ++D+DG G+IP LK++L + D
Sbjct: 62 PGQLNFTAFLTLFGEKVSGTDPE---DALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNF 118
Query: 90 TNEEL 94
+ EE+
Sbjct: 119 SKEEI 123
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEI 101
+EL+EAF + D+D +G+I LK++ L ++EL+ M+ E
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC 61
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++L+ AFR +D+DG+G+I L+ + L L EELD MI E D D G V+++
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+GQP ++ LD +I E D D+ GR+ ++EF + A+
Sbjct: 35 LGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 44 KFIVEEDDEAMQKELREAFRLYDKDG-NGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K VE+ E + E + AF ++ +G I T L ++ R L T EEL IDE+D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVD 65
Query: 103 SDGSGTVDFD 112
DGSGTVDFD
Sbjct: 66 EDGSGTVDFD 75
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
+ R +GQ + L E I+EVD D SG ++FDEF+ +
Sbjct: 44 VXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVR 83
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 15/106 (14%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKEL-REAFRLYDKDGN 70
P+N D L++++D+D SG++++ EF+ A D + + K+L AFR++D D +
Sbjct: 86 PYN---FDLLLDQIDSDGSGKIDYTEFIAAAL------DRKQLSKKLIYCAFRVFDVDND 136
Query: 71 GYIPTSCLKEILRELDDQ--LTNEELD---GMIDEIDSDGSGTVDF 111
G I T+ L IL + + +T +++ MI ++D + G +DF
Sbjct: 137 GEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDF 182
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 37 EFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDG 96
+F LA I ++ ++ ++L+ F + D+DG GYI LK+ L E D D
Sbjct: 33 KFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL-EKDGLKLPYNFDL 91
Query: 97 MIDEIDSDGSGTVDF 111
++D+IDSDGSG +D+
Sbjct: 92 LLDQIDSDGSGKIDY 106
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDE-------------AMQKELREAFRLY 65
D +IE D S R++F FV + A F ED++ + + +L AF+LY
Sbjct: 64 DRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLY 123
Query: 66 DKDGNGYIPTSCLKEILREL-DDQLTNEELDGMID----EIDSDGSGTVDF 111
D D +G I + ++LR + Q+T E+L+ + D E D DG G V F
Sbjct: 124 DLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFDG 113
L FR D++ GY+ L++I N D +I+ DGS VDF G
Sbjct: 31 LHHRFRALDRNKKGYLSRMDLQQI----GALAVNPLGDRIIESFFPDGSQRVDFPG 82
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKEL-REAFRLYDKDGNGYIPTS 76
D L++++D+D SG +++ EF+ A D + K+L AFR++D D +G I T+
Sbjct: 92 FDLLLDQIDSDGSGNIDYTEFLAAAI------DRRQLSKKLIYCAFRVFDVDNDGEITTA 145
Query: 77 CLKEILRELDDQLTNEELD-----GMIDEIDSDGSGTVDF 111
L +L + + E D MI E+D +G G +DF
Sbjct: 146 ELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDF 185
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 37 EFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDG 96
F LA I ++ ++ ++L+ AF D++G G I L++ L E + D
Sbjct: 36 RFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGL-ERSGLMLPPNFDL 94
Query: 97 MIDEIDSDGSGTVDF 111
++D+IDSDGSG +D+
Sbjct: 95 LLDQIDSDGSGNIDY 109
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 58 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 107
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 108 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 148
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 121 FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTD 170
Query: 69 GNGYIPTS 76
+G+I S
Sbjct: 171 QDGWIQVS 178
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 59 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 108
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 109 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 149
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 122 FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTD 171
Query: 69 GNGYIPTS 76
+G+I S
Sbjct: 172 QDGWIQVS 179
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 37 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 86
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 87 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 127
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 100 FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTD 149
Query: 69 GNGYIPTS 76
+G+I S
Sbjct: 150 QDGWIQVS 157
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 40 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 89
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 90 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 130
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 103 FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTD 152
Query: 69 GNGYIPTS 76
+G+I S
Sbjct: 153 QDGWIQVS 160
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 36 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 85
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 86 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFD 126
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 99 FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTD 148
Query: 69 GNGYIPTS 76
+G+I S
Sbjct: 149 QDGWIQVS 156
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
LD +I+E SG + F F+T+ + + D E + + AF++ D DG G I S
Sbjct: 51 LDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSF 103
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
L+E+L D+ T EE+ M D +G VD+
Sbjct: 104 LEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDY 137
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDD-QLTNEELDGMIDEIDSDGSGTV 109
D+ ++ +EAF + D++ +G I L+E + + NEELD MI E SG +
Sbjct: 7 DQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPI 62
Query: 110 DF 111
+F
Sbjct: 63 NF 64
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKEL-REAFRLYDKDGNGYIPTS 76
+ +++ ++D++ SG++ + +F LAA + ++KE+ F+ +D DGNG I
Sbjct: 95 IHQVLRDIDSNASGQIHYTDF--LAATI---DKQTYLKKEVCLIPFKFFDIDGNGKISVE 149
Query: 77 CLKEILR--ELDDQLTNEELDGMIDEIDSDGSGTVDF 111
LK I ++++ L ++ +D ++ E+D +G G +DF
Sbjct: 150 ELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDF 186
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 2 VADILRLMGQ-----PFNKKILDELIEEVDADKSGRLEFDEFVTLAAK 44
V ++ R+ G+ P K +D L++EVD + G ++F EF+ + +K
Sbjct: 148 VEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 2 VADILRLMGQ-PFNKKILDELIE-EVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELR 59
D++R +GQ P N +++ L + D L+F++F+ + + I + D+ ++
Sbjct: 29 CGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMM-QTIAKNKDQGCFEDYV 87
Query: 60 EAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
E R++DK+GNG + + ++ +L L +++T EE++ ++ D +G ++++
Sbjct: 88 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYE 139
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSD 104
E E +EAF+L+D+ G+G I S +++R L TN E+ ++ SD
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD 55
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 2 VADILRLMGQ-PFNKKILDELIE-EVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELR 59
D++R +GQ P N +++ L + D L+F++F+ + + I + D+ ++
Sbjct: 31 CGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPMM-QTIAKNKDQGCFEDYV 89
Query: 60 EAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
E R++DK+GNG + + ++ +L L +++T EE++ ++ D +G ++++
Sbjct: 90 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYE 141
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSD 104
E E +EAF+L+D+ G+G I S +++R L TN E+ ++ SD
Sbjct: 4 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD 57
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 40 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 89
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 90 MIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFD 130
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 10 GQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
G + + D LI + D G++ FD+F+ + + L + FR YD D
Sbjct: 104 GYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI----------VLQRLTDIFRRYDTDQ 153
Query: 70 NGYIPTS 76
+G+I S
Sbjct: 154 DGWIQVS 160
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLY 65
L+ + Q NK I D++ D +K G ++F EF+ A I++E M+++L+ F+LY
Sbjct: 48 LQGLNQKANKHI-DQVYNTFDTNKDGFVDFLEFIA-AVNLIMQE---KMEQKLKWYFKLY 102
Query: 66 DKDGNGYI 73
D DGNG I
Sbjct: 103 DADGNGSI 110
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 10 GQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
G PF+ ++L+ D + SG + FDEF L FI+ +RE FR D G
Sbjct: 57 GVPFSLATTEKLLHMYDKNHSGEITFDEFKDLH-HFILS---------MREGFRKRDSSG 106
Query: 70 NGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+G + ++ ++ L Q++ + ++ + D G++ FD
Sbjct: 107 DGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFD 149
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+EL E FR D DG+G I L L + + ++ D + SG + FD
Sbjct: 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFD 83
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++E+ +AFRL+D D +G I L+ + +EL + LT EEL MI E D + +D D
Sbjct: 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
LD +I+E SG + F F+T+ + + D E + + AF++ D DG G I S
Sbjct: 64 LDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSF 116
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
L+E+L + T EE+ M D +G VD+
Sbjct: 117 LEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 150
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDD-QLTNEELDGMIDEIDSDGSGTV 109
DE ++ +EAF + D++ +G I L+E + + NEELD MI E SG +
Sbjct: 20 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPI 75
Query: 110 DF 111
+F
Sbjct: 76 NF 77
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
LD +I+E SG + F F+T+ + + D E + + AF++ D DG G I S
Sbjct: 46 LDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDV---IMGAFKVLDPDGKGSIKKSF 98
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
L+E+L + T EE+ M D +G VD+
Sbjct: 99 LEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 132
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDD-QLTNEELDGMIDEIDSDGSGTV 109
DE ++ +EAF + D++ +G I L+E + + NEELD MI E SG +
Sbjct: 2 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPI 57
Query: 110 DF 111
+F
Sbjct: 58 NF 59
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL FR++DK+ +G+I L EILR + + E+++ ++ + D + G +DFD
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTL 41
+ +ILR G+ ++ +++L+++ D + GR++FDEF+ +
Sbjct: 32 LGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 2 VADILRLMGQ-PFN---KKIL-DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQK 56
V DI+R +GQ P N KIL + EE++A K + F+EF+ + + D+ +
Sbjct: 26 VGDIVRALGQNPTNAEINKILGNPSKEEMNAKK---ITFEEFLPML-QAAANNKDQGTFE 81
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLT 90
+ E R++DK+GNG + + L+ +L L +++T
Sbjct: 82 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 115
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
+EAF L+D+ G+ I S + +I+R L TN E++ ++
Sbjct: 6 FKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKIL 46
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ELREAFR +DKD +GYI L +R + T EL + +I+ + G VDFD
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAA 43
+ + +R MG + L EL ++++ + G ++FD+FV L
Sbjct: 32 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMG 73
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PFN + +I D + + F EF T K+I + + FR YD+D +G
Sbjct: 37 PFNPVTVRSIISMFDRENKAGVNFSEF-TGVWKYITD---------WQNVFRTYDRDNSG 86
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
I + LK+ L +L+++ D +I + D G G + FD
Sbjct: 87 MIDKNELKQALSGY--RLSDQFHDILIRKFDRQGRGQIAFD 125
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 10/69 (14%)
Query: 8 LMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDK 67
L G + + D LI + D G++ FD+F+ + + L + FR YD
Sbjct: 97 LSGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGC----------IVLQRLTDIFRRYDT 146
Query: 68 DGNGYIPTS 76
D +G+I S
Sbjct: 147 DQDGWIQVS 155
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 34 IGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTYADYME 89
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
AF+ +D++G G+I + L+ +L L ++L++EE+D +I+ D
Sbjct: 90 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 131
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 33 IGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTYADYME 88
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
AF+ +D++G G+I + L+ +L L ++L++EE+D +I+ D
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 130
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 6 LRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV--TLAAKFIVEEDDEAMQKELREAFR 63
L+ +G + + +L + D D SG +++ EF+ TL I ED L AF
Sbjct: 53 LKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIERED------HLFAAFT 106
Query: 64 LYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+DKDG+GYI L++ E + + ++ + ++D D G +D++
Sbjct: 107 YFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYN 153
Score = 31.2 bits (69), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 36 DEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELD 95
++F A + I E E L+E F D D +G I LK L+ + L E+
Sbjct: 7 NKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEIL 66
Query: 96 GMIDEIDSDGSGTVDF 111
+ D D SGT+D+
Sbjct: 67 DLXQAADVDNSGTIDY 82
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
++EL +VD D GR++++EFV K
Sbjct: 135 IEELXRDVDQDNDGRIDYNEFVAXXQK 161
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKE--LREAFRLYDKDGNGYIPT 75
+D +++EVD DK+G +E+ EF+++ D + + E LR AF L+D D +G I
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFISVCM------DKQILFSEERLRRAFNLFDTDKSGKITK 454
Query: 76 SCLKEI--LRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L + L + ++ N+ ++ E D + +DFD
Sbjct: 455 EELANLFGLTSISEKTWND----VLGEADQNKDNMIDFD 489
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKE---ILRELDDQL-----TNEELDGMIDEIDSDGS 106
+KEL + F+ DK+G+G + L E +LR ++L EE+D ++ E+D D +
Sbjct: 354 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKN 413
Query: 107 GTVDF 111
G +++
Sbjct: 414 GYIEY 418
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 2 VADILRLMGQ-PFN---KKIL-DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQK 56
V DI R +GQ P N KIL + EE++A + F+EF+ + + D+ +
Sbjct: 28 VGDIARALGQNPTNAEINKILGNPSKEEMNA---AAITFEEFLPML-QAAANNKDQGTFE 83
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLT 90
+ E R++DK+GNG + + L+ +L L +++T
Sbjct: 84 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 117
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 51 DEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
+A + +EAF L+D+ G+ I S + +I R L TN E++ ++
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 48
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 33 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 88
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
AF+ +D++G G+I + L+ +L L ++L++EE+D +I+ D
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 130
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 2 VADILRLMGQ-PFN---KKIL-DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQK 56
V DI R +GQ P N KIL + EE++A + F+EF+ + + D+ +
Sbjct: 30 VGDIARALGQNPTNAEINKILGNPSKEEMNA---AAITFEEFLPML-QAAANNKDQGTFE 85
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLT 90
+ E R++DK+GNG + + L+ +L L +++T
Sbjct: 86 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT 119
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 49 EDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
E +A + +EAF L+D+ G+ I S + +I R L TN E++ ++
Sbjct: 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 50
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 DDEAMQKELREA-FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGT 108
DD K RE F+ +D +G+G I + L E L+ L +T +E+ M+ EID+DG G
Sbjct: 2 DDHPQDKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGF 60
Query: 109 VDF 111
+ F
Sbjct: 61 ISF 63
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 2 VADILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAK---FIVEEDDEAMQKEL 58
+ D+LR GQ N + + I E+++ ++ ++F+ + + F + D E E
Sbjct: 27 IGDLLRACGQ--NPTLAE--ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPE----EF 78
Query: 59 REAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEI 101
+ F+++DKD G I L+ +L L ++L+NEE+D ++ +
Sbjct: 79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 59 REAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++AF L+D+ G G IP + + ++LR T E I EI+S VD +
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDME 57
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKQYVIALHMTSAGK 96
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 97 TNQKLEWAFSLYDVDGNGTIS 117
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F ++V T A K ++L AF LYD DG
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 112
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 113 NGTISKNEVLEIVTAIFKMISPE 135
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 16 KILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPT 75
K + + DA+ G ++F EF+ + ++++L+ AF +YD DGNGYI
Sbjct: 63 KFAEHVFRTFDANGDGTIDFREFIIA----LSVTSRGKLEQKLKWAFSMYDLDGNGYISK 118
Query: 76 SCLKEILRELDDQLTN 91
+ + EI++ + +++
Sbjct: 119 AEMLEIVQAIYKMVSS 134
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
Q+E +EAF+L+DKD + + L ++R L T +++ ++ + D D SG D
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFD 68
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/41 (24%), Positives = 26/41 (63%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKF 45
++R +G K+ + E++++ D D SG+ + + F+T+ ++
Sbjct: 39 VMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKQYVIALHMTSAGK 96
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 97 TNQKLEWAFSLYDVDGNGTIS 117
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F ++V T A K ++L AF LYD DG
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 112
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 113 NGTISKNEVLEIVTAIFKMISPE 135
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAA---KFIVEEDDEAM-QKELREAFRLYDKDGNGYIP 74
D +++ D++ G+LE E L F+++ M KE +AF LYD+DGNGYI
Sbjct: 150 DLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYID 209
Query: 75 TSCLKEILRELDDQLTNEELD 95
+ L +L++L ++ +ELD
Sbjct: 210 ENELDALLKDLCEK-NKQELD 229
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILREL--------DDQLTNEELDGMIDEIDSDGSGT 108
E + +R YD D +G+I T LK L++L DD E D M+ DS+ G
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 109 VDF 111
++
Sbjct: 164 LEL 166
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 54 MQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
M ++ F+ +D +G+G I S L + LR L + +E+ M+ EID+DG G +DF+
Sbjct: 1 MADDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 58
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D LR +G P N+ + D + + + L D+ L + E++ +A K E
Sbjct: 26 LGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIE--VNEKELDATTKAKTE 83
Query: 61 ----AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
AF+++DK+ G + L+ +L L ++LT+ E+D ++ ++ D +G +D+
Sbjct: 84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 138
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 59 REAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMID 99
++ F L+DK G G I L + LR + TN+ + +I+
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKEYVIALHMTSAGK 97
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 98 TNQKLEWAFSLYDVDGNGTIS 118
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F E+V T A K ++L AF LYD DG
Sbjct: 63 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 113
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 114 NGTISKNEVLEIVTAIFKMISPE 136
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKEYVIALHMTSAGK 96
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 97 TNQKLEWAFSLYDVDGNGTIS 117
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F E+V T A K ++L AF LYD DG
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 112
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 113 NGTISKNEVLEIVTAIFKMISPE 135
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKEYVIALHMTSAGK 96
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 97 TNQKLEWAFSLYDVDGNGTIS 117
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F E+V T A K ++L AF LYD DG
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 112
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 113 NGTISKNEVLEIVTAIFKMISPE 135
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SGR+ EF T+ +KF E D +A + + FR +D + +G + L
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHV---FRSFDANSDGTLDFKEYVIALHMTSAGK 96
Query: 90 TNEELDGMIDEIDSDGSGTVD 110
TN++L+ D DG+GT+
Sbjct: 97 TNQKLEWAFSLYDVDGNGTIS 117
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + DA+ G L+F E+V T A K ++L AF LYD DG
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGK---------TNQKLEWAFSLYDVDG 112
Query: 70 NGYIPTSCLKEILRELDDQLTNE 92
NG I + + EI+ + ++ E
Sbjct: 113 NGTISKNEVLEIVTAIFKMISPE 135
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
F+ +D +G+G I +S L + L+ L +T +E+ M+ EID+DG G + FD
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL + FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL + FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 32 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL + FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 40 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 30 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 85
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
L+E F++ D D +G I LK+ L+ + +L E+ ++D D D SGT+D+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 30 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 85
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL + FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 31 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 31 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 86
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++EL + FR++DK+ +GYI LK +L+ + +T ++++ ++ + D + G +D+D
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 24/35 (68%)
Query: 5 ILRLMGQPFNKKILDELIEEVDADKSGRLEFDEFV 39
+L+ G+ + ++EL+++ D + GR+++DEF+
Sbjct: 35 MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 33 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 88
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 33 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 88
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
E ++E++EAF L+D + G I LK +R L + E+ +++E D +G+G + F
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 112 D 112
D
Sbjct: 63 D 63
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
+ D+ R +G P N+ + +KS L F+EF L A + + ++ + E
Sbjct: 33 LGDVCRCLGINPRNEDVFAVGGTHKMGEKS--LPFEEF--LPAYEGLMDCEQGTFADYME 88
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMI 98
AF+ +D++G G+I + L+ +L L ++L++E++D +I
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 38/60 (63%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+A ++ +AF+++DK+ G + L+ +L L ++LT+ E+D ++ ++ D +G +D+
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
++ F+ +D +G+G I S L + LR L + +E+ M+ EID+DG G +DF+
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFN 57
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTL-------AAKFIVEEDDEA 53
N+K D+LI+ +DA+ GR+ FDE+ TL AK I E++ ++
Sbjct: 54 NRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIAKLIHEQEQQS 100
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 47 VEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILREL-DDQLTNEELDGMIDEIDSDG 105
V +DDE +E+ AF+++D +G+G I K I++++ ++ LT+ E++ + E D DG
Sbjct: 2 VRQDDE---EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDG 58
Query: 106 SGTVD 110
+G +D
Sbjct: 59 NGVID 63
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 26 DADKSGRLEFDEFVTLAAKFIVEE--DDEAMQKELREAFRLYDKDGNGYIPTSCLKEILR 83
DA+ G ++FDEF KFI+++ ++ E+ EA + D+DGNG I ++++
Sbjct: 18 DANGDGVIDFDEF-----KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72
Query: 84 ELDDQL 89
+ + L
Sbjct: 73 KSKNAL 78
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTL-------AAKFIVEEDDEA 53
N+K D+LI+ +DA+ GR+ FDE+ TL AK I E++ ++
Sbjct: 53 NRKAADKLIQNLDANHDGRISFDEYWTLIGGITGPIAKLIHEQEQQS 99
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
++ +D+D +G+L F+EF L K + ++ +D D +G I +S L
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNI----------KRWQAIYKQFDTDRSGTICSSELPG 112
Query: 81 ILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L NE L MI SD SG +DFD
Sbjct: 113 AFEAAGFHL-NEHLYNMIIRRYSDESGNMDFD 143
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 10 GQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
G N+ + + +I +D+SG ++FD F++ + +AM + AF+ DKDG
Sbjct: 118 GFHLNEHLYNMIIRRY-SDESGNMDFDNFISCLVRL------DAMFR----AFKSLDKDG 166
Query: 70 NGYIPTSCLKEILR 83
G I + ++E L+
Sbjct: 167 TGQIQVN-IQEWLQ 179
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCL 78
D + + D ++G +EF EFV F + ++++ AF+LYD G+I L
Sbjct: 77 DRIFDVFDVKRNGVIEFGEFVRSLGVF---HPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 79 KE----ILRELDDQLTNEELDGMID----EIDSDGSGTVDFD 112
KE +L E + L+ + ++ M+D + D G +D D
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 10/51 (19%)
Query: 26 DADKSGRLEFDEFV---TLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYI 73
D +K GR+EF EF+ ++ ++ ++E +LR AF+LYD D +GYI
Sbjct: 73 DENKDGRIEFSEFIQALSVTSRGTLDE-------KLRWAFKLYDLDNDGYI 116
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCL 78
D + + D ++G +EF EFV F + ++++ AF+LYD G+I L
Sbjct: 77 DRIFDVFDVKRNGVIEFGEFVRSLGVF---HPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 79 KE----ILRELDDQLTNEELDGMID----EIDSDGSGTVDFD 112
KE +L E + L+ + ++ M+D + D G +D D
Sbjct: 134 KEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDID 175
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 9 MGQPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKD 68
+G+ ++ LD ++ A+ G + F F+T+ I D+E + + AF L+D +
Sbjct: 86 LGRLCTEQELDSMV----AEAPGPINFTMFLTIFGDRIAGTDEEDV---IVNAFNLFD-E 137
Query: 69 GNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
G+G LK L ++ + +E+D + E DG+G +D
Sbjct: 138 GDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLID 179
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E +EAF+L D+D +G+I + ++ L T +ELD M+ E G ++F
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE----APGPINF 108
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 11 QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGN 70
+PFN + ++ +D D SG + F+EF L A+ R+ F +D D +
Sbjct: 68 KPFNLETCRLMVSMLDRDMSGTMGFNEFKEL----------WAVLNGWRQHFISFDTDRS 117
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
G + L++ L + +L+ + ++ + ++G T D
Sbjct: 118 GTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 4 DILRLMGQ--PFNKK--ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELR 59
D +++ Q PF + L D D +G + F+EF+T+ + ++++L
Sbjct: 47 DFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST----TSRGTLEEKLS 102
Query: 60 EAFRLYDKDGNGYI 73
AF LYD + +GYI
Sbjct: 103 WAFELYDLNHDGYI 116
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
SG+L ++FV + +F E L F ++DKD NG+I +L
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHL---FTVFDKDNNGFIHFEEFITVLSTTSRGT 96
Query: 90 TNEELDGMIDEIDSDGSGTVDFD 112
E+L + D + G + FD
Sbjct: 97 LEEKLSWAFELYDLNHDGYITFD 119
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKF--------IVEEDDEAMQKELREAFRLYDKDG 69
L E D + G + FDE +T+ A + ED+ + +++ F+L DK+
Sbjct: 101 LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE 160
Query: 70 NGYI 73
+GYI
Sbjct: 161 DGYI 164
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 20 ELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLK 79
++ +D+D +G+L F+EF L K+ + ++ +D D +G I +S L
Sbjct: 51 SMVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQAIYKQFDVDRSGTIGSSELP 100
Query: 80 EILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L NE L MI SD G +DFD
Sbjct: 101 GAFEAAGFHL-NEHLYSMIIRRYSDEGGNMDFD 132
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L D ++G ++F++FVT + + + ++LR F LYD + +GYI + +
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILL----RGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 81 ILRELDDQL------------TNEELDGMIDEIDSDGSGTVDFD 112
I++ + D + + +D ++D + G V D
Sbjct: 114 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 157
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L D ++G ++F++FVT + + + ++LR F LYD + +GYI + +
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILL----RGTVHEKLRWTFNLYDINKDGYINKEEMMD 116
Query: 81 ILRELDDQL------------TNEELDGMIDEIDSDGSGTVDFD 112
I++ + D + + +D ++D + G V D
Sbjct: 117 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 11 QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGN 70
+PFN + ++ +D D SG + F+EF L A+ R+ F +D D +
Sbjct: 37 KPFNLETCRLMVSMLDRDMSGTMGFNEFKEL----------WAVLNGWRQHFISFDSDRS 86
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
G + L++ L + +L + ++ + + G T D
Sbjct: 87 GTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFD 126
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L D ++G ++F++FVT + + + ++LR F LYD + +GYI + +
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILL----RGTVHEKLRWTFNLYDINKDGYINKEEMMD 113
Query: 81 ILRELDDQL------------TNEELDGMIDEIDSDGSGTVDFD 112
I++ + D + + +D ++D + G V D
Sbjct: 114 IVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLD 157
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L D ++G ++F++FVT + + + ++LR F LYD + +GYI + +
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILL----RGTVHEKLRWTFNLYDINKDGYINKEEMMD 149
Query: 81 ILRELDDQL------------TNEELDGMIDEIDSDGSGTVDFD 112
I++ + D + + +D ++D + G V D
Sbjct: 150 IVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 193
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 55 QKELREAFRLYDKDGNGYIPTSCLKEILR 83
++EL AFR++DK+ +GYI L EILR
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILR 32
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PF+ + +I +D D +G++ F+ F L A +E F D+DG+G
Sbjct: 36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------NAWKENFMTVDQDGSG 85
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDG 105
+ L++ + + +L+ + L ++ +G
Sbjct: 86 TVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
PF+ + +I +D D +G++ F+ F L A +E F D+DG+G
Sbjct: 36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------NAWKENFMTVDQDGSG 85
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEIDSDG 105
+ L++ + + +L+ + L ++ +G
Sbjct: 86 TVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 11 QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGN 70
+PFN + ++ +D D SG + F+EF L A+ R+ F D D +
Sbjct: 68 KPFNLETCRLMVSMLDRDMSGTMGFNEFKEL----------WAVLNGWRQHFISLDTDRS 117
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVD 110
G + L++ L + +L+ + ++ + ++G T D
Sbjct: 118 GTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFD 157
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 30 SGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
+GR+ +F ++ AKF + D +A + + FR +D + +G + L
Sbjct: 48 TGRITQQQFQSIYAKFFPDTDPKAYAQHV---FRSFDSNLDGTLDFKEYVIALHXTTAGK 104
Query: 90 TNEELDGMIDEIDSDGSGTV 109
TN++L+ D DG+GT+
Sbjct: 105 TNQKLEWAFSLYDVDGNGTI 124
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFV-----TLAAKFIVEEDDEAMQKELREAFRLYDKDG 69
K + D++ G L+F E+V T A K ++L AF LYD DG
Sbjct: 70 KAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGK---------TNQKLEWAFSLYDVDG 120
Query: 70 NGYIPTSCLKEILRELDDQLTNEELDGMID 99
NG I + + EI+ + +T E++ + D
Sbjct: 121 NGTISKNEVLEIVXAIFKXITPEDVKLLPD 150
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 2 VADILRLMG-QPFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE 60
V D+LR +G P ++ + +K+ +LE E + + + + +D E E
Sbjct: 33 VGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLE--EILPIYEE-MSSKDTGTAADEFME 89
Query: 61 AFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELD 95
AF+ +D++G G I ++ ++ +L+ L +++T ++ +
Sbjct: 90 AFKTFDREGQGLISSAEIRNVLKMLGERITEDQCN 124
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTV 109
++++ FR D D +GY+ LK L++ +LT E ++D D+DG G +
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 26 DADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILREL 85
DADK+G ++F EF+ + V E + +L AF+LYD D NG I E+LR +
Sbjct: 73 DADKNGYIDFKEFICALS---VTSRGE-LNDKLIWAFQLYDLDNNGLISYD---EMLRIV 125
Query: 86 D 86
D
Sbjct: 126 D 126
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 10/104 (9%)
Query: 13 FNKKILDELIEEVDAD-KSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNG 71
F+KK L + + D SG L EF + +F D A + + F ++D D NG
Sbjct: 22 FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYV---FNVFDADKNG 78
Query: 72 YIPTSCLKEILRELDDQLTNEELDGMIDEI---DSDGSGTVDFD 112
YI KE + L E D +I D D +G + +D
Sbjct: 79 YID---FKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYD 119
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
++ +D+D +G+L F+EF L K+ + ++ +D D +G I ++ L
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQGIYKRFDTDRSGTIGSNELPG 112
Query: 81 ILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L N+ + MI SD +G +DFD
Sbjct: 113 AFEAAGFHL-NQHIYSMIIRRYSDETGNMDFD 143
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 20 ELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLK 79
++ +D+D +G+L F+EF L K+ + ++ +D D +G I ++ L
Sbjct: 51 SMVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQGIYKRFDTDRSGTIGSNELP 100
Query: 80 EILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L N+ + MI SD +G +DFD
Sbjct: 101 GAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFD 132
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
++ +D+D +G+L F+EF L K+ + ++ +D D +G I ++ L
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQGIYKRFDTDRSGTIGSNELPG 112
Query: 81 ILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L N+ + MI SD +G +DFD
Sbjct: 113 AFEAAGFHL-NQHIYSMIIRRYSDETGNMDFD 143
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+ + +E++EAF + D++ +G+I + LKE+ L ++EL M+ E G ++F
Sbjct: 19 QKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNF 74
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 52 EAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+ + +E++EAF + D++ +G+I + LKE+ L ++EL M+ E G ++F
Sbjct: 19 QKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE----APGPLNF 74
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L D D +G + F++F+ + + +Q++L AF LYD + +GYI + +
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILL----RGTVQEKLNWAFNLYDINKDGYITKEEMLD 162
Query: 81 ILRELDDQL 89
I++ + D +
Sbjct: 163 IMKAIYDMM 171
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
++ +D+D +G+L F+EF L K+ + ++ +D D +G I ++ L
Sbjct: 59 MVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQGIYKRFDTDRSGTIGSNELPG 108
Query: 81 ILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L N+ + MI SD +G +DFD
Sbjct: 109 AFEAAGFHL-NQHIYSMIIRRYSDETGNMDFD 139
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 43 AKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K+ +ED + + +E + +D +GNG I LK +L +L T+ EL +I E+
Sbjct: 19 PKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV- 77
Query: 103 SDGSG 107
S GSG
Sbjct: 78 SSGSG 82
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 42 AAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDE 100
AA ++ + + +E++EAF + D++ +G+I + LKE+ L ++EL M+ E
Sbjct: 5 AASGVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 63
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 43 AKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEID 102
K+ +ED + + +E + +D +GNG I LK +L +L T+ EL +I E+
Sbjct: 38 PKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEV- 96
Query: 103 SDGSG 107
S GSG
Sbjct: 97 SSGSG 101
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.0 bits (66), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTV 109
++++ FR D D +GY+ LK L++ + +LT E ++ D+DG G +
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKI 98
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKF 45
LDE+IEEVD + G + F+EF+ + K
Sbjct: 47 LDEMIEEVDKNGDGEVSFEEFLVMMKKI 74
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 57 ELREAFRLYD-KDGN-GYIPTSCLKEILRELDDQLTN--EELDGMIDEIDSDGSGTVDFD 112
E++ AF ++ K+G+ I LK +++ L L LD MI+E+D +G G V F+
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQ---LTNEELDGMIDEIDSDGSGTV 109
+L+E FR+ D D +G+I LK L+ + LT E + D DG G +
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKI 97
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
++ +D+D +G+L F+EF L K+ + ++ ++ D +G I ++ L
Sbjct: 779 MVAVMDSDTTGKLGFEEFKYLWNNI----------KKWQGIYKRFETDRSGTIGSNELPG 828
Query: 81 ILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
L N+ + MI SD +G +DFD
Sbjct: 829 AFEAAGFHL-NQHIYSMIIRRYSDETGNMDFD 859
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 16 KILDELIEEVDADKSGRLEFDEFVTLAAKFIVEE-------DDEAMQKELREAFRLYDKD 68
K L ++ ++D + G+L+ E + K + + D ++ E+ + D D
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 69 GNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
NGYI S + + L+ E L + DSDGSG +
Sbjct: 374 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 414
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIP----TS 76
+ E+ D +K G+L DEF +A F Q+++ + F D DGNG + TS
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAF----SPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 77 CLKEIL 82
C++++L
Sbjct: 62 CIEKML 67
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 59 REAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ F +DK+ +G + +E+ T E++ +EID DG+G ++ D
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNAD 57
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQK-ELREAFRLYDKDGNGY 72
N+++L + + +D D +G ++ EF AA V+E D + +K L+ ++L D DG+G
Sbjct: 34 NEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA--VKEQDLSDEKVGLKILYKLMDADGDGK 91
Query: 73 IPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
+ KE + + E++ I + D++G G +
Sbjct: 92 LT----KEEVTTFFKKFGYEKVVDQIMKADANGDGYI 124
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 16 KILDELIEEV--------DADKSGRLEFDEFVTLAAKFIVEEDDEAM----------QKE 57
KI DE ++++ DA GRL+ +E LA + +E++ + E
Sbjct: 49 KITDERVQQIKKSFXSAYDATFDGRLQIEE---LANXILPQEENFLLIFRREAPLDNSVE 105
Query: 58 LREAFRLYDKDGNGYIPTSCLKEILREL 85
+ +R YD D +GYI + LK L++L
Sbjct: 106 FXKIWRKYDADSSGYISAAELKNFLKDL 133
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 23/32 (71%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTLAAKF 45
N+K+++ ++E++D + +L F+EF+ L A+
Sbjct: 55 NEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 86
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 23/32 (71%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTLAAKF 45
N+K+++ ++E++D + +L F+EF+ L A+
Sbjct: 54 NEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 23/32 (71%)
Query: 14 NKKILDELIEEVDADKSGRLEFDEFVTLAAKF 45
N+K+++ ++E++D + +L F+EF+ L A+
Sbjct: 54 NEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 16 KILDELIEEVDADKSGRLEFDEFVTLAAKF-------IVEEDDEAMQKELREAFRLYDKD 68
K L ++ ++D + G+L+ E + K + + D ++ E+ + D D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 69 GNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTV 109
NGYI S + + L+ E L + DSDGSG +
Sbjct: 100 RNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 140
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDE------------AMQKELREAFRLYD 66
D +I ++ ++ F F+ A F ED+E + +L AFRLYD
Sbjct: 64 DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
Query: 67 KDGNGYIPTSCLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDF 111
D + I L ++LR + D+ D I E D DG + F
Sbjct: 124 LDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 62 FRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
FR D+DG+ + ++ L +L L E +G+ + D +GSGT+D +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLE 93
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 10/98 (10%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
L ++D D S L+ DEF AK + D Q E R +D++G+G +
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLD----QAEAEGVCRKWDRNGSGTLD--- 91
Query: 78 LKEILRELDDQLTNEE---LDGMIDEIDSDGSGTVDFD 112
L+E LR L ++ + ++D G G V D
Sbjct: 92 LEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVD 129
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSCLKE 80
L DAD +G + F++FV + + + ++L+ AF LYD + +G I +
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILL----RGTVHEKLKWAFNLYDINKDGCITKEEMLA 189
Query: 81 ILRELDDQL 89
I++ + D +
Sbjct: 190 IMKSIYDMM 198
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 50 DDEAMQKELREAFRL----YDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDG 105
+DE + +L EAF++ +D +GNG I LK +L +L T+ EL +I E+ S
Sbjct: 39 NDEDLPSKL-EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGS 97
Query: 106 SGTVDFD 112
T +
Sbjct: 98 EETFSYS 104
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 14 NKKI-LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE--AFRLYDKDGN 70
N KI LDE++ + D +LE T + VE E + AF + DG
Sbjct: 34 NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF-LDGW 92
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ TS LK+ R + L E D + D D DGSGT+ D
Sbjct: 93 KQLATSELKKWARN-EPTLIREWGDAVFDIFDKDGSGTITLD 133
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 14 NKKI-LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE--AFRLYDKDGN 70
N KI LDE++ + D +LE T + VE E + AF + DG
Sbjct: 34 NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF-LDGW 92
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ TS LK+ R + L E D + D D DGSGT+ D
Sbjct: 93 KQLATSELKKWARN-EPTLIREWGDAVFDIFDKDGSGTITLD 133
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 14 NKKI-LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE--AFRLYDKDGN 70
N KI LDE++ + D +LE T + VE E + AF + DG
Sbjct: 34 NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF-LDGW 92
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ TS LK+ R + L E D + D D DGSGT+ D
Sbjct: 93 KQLATSELKKWARN-EPTLIREWGDAVFDIFDKDGSGTITLD 133
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 28.5 bits (62), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 14 NKKI-LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE--AFRLYDKDGN 70
N KI LDE++ + D +LE T + VE E + AF + DG
Sbjct: 34 NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF-LDGW 92
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ TS LK+ R + L E D + D D DGSGT+ D
Sbjct: 93 KQLATSELKKWARN-EPTLIREWGDAVFDIFDKDGSGTITLD 133
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 21 LIEEVDADKSGRLEFDEFVTLAAKFIVEEDD 51
E+ D DKSG+LE E V L KF E D
Sbjct: 167 FFEKADTDKSGKLERTELVHLFRKFWXEPYD 197
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTVDFD 112
++++ F+ D D +G+I LK +L+ LT+ E + D DG G + D
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGID 101
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 17/110 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDE------------AMQKELREAFRLYD 66
D +I + ++ F F+ A F ED+E + +L AFRLYD
Sbjct: 64 DRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYD 123
Query: 67 KDGNGYIPTSCLKEILR-----ELDDQLTNEELDGMIDEIDSDGSGTVDF 111
D + I L ++LR + D+ D I E D DG + F
Sbjct: 124 LDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISF 173
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D++ +G+I + LKE L ++EL M+ E G ++F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKE----APGPLNF 53
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 14 NKKI-LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE--AFRLYDKDGN 70
N KI LDE++ + D +LE T + VE E + AF + DG
Sbjct: 34 NGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF-LDGF 92
Query: 71 GYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDFD 112
+ TS LK+ R + L E D + D D DGSGT+ D
Sbjct: 93 KQLATSELKKWARN-EPTLIREWGDAVFDIFDKDGSGTITLD 133
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTVDFD 112
++++AF + D+D +G+I LK L+ LT+ E + DSDG G + D
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVD 101
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D D +G++ +K I +L ++EL M+ E G ++F
Sbjct: 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 69
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D D +G++ +K I +L ++EL M+ E G ++F
Sbjct: 6 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 57
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D D +G++ +K I +L ++EL M+ E G ++F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 58
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D D +G++ +K I +L ++EL M+ E G ++F
Sbjct: 7 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 58
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 56 KELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMIDEIDSDGSGTVDF 111
+E++EAF + D D +G++ +K I +L ++EL M+ E G ++F
Sbjct: 4 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNF 55
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTVD 110
++++ F + DKD +G+I L IL+ L+ +E ++ D DGSG ++
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIE 98
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE-AFRLYDKDGN 70
PFN + ++ +V D R F+E KFIVEE E M+ LRE +R+ D GN
Sbjct: 242 PFNVSYVSQMFAKVALDH--REIFEE----RTKFIVEE-RERMKSALREMGYRITDSRGN 294
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQ---LTNEELDGMIDEIDSDGSGTVDFD 112
+++E F + DKD +G+I LK +L+ L + E ++ DSD G + D
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLK---EILRELDDQLTNEELDGMIDEIDSDGSGTV 109
++++AF D+D +G+I LK ++ + LT+ E + DSDG G +
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 98
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLK---EILRELDDQLTNEELDGMIDEIDSDGSGTV 109
++++AF D+D +G+I LK ++ + LT+ E + DSDG G +
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 97
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 12 PFNKKILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELRE-AFRLYDKDGN 70
PFN + ++ +V D R F+E KFIVEE E M+ LRE +R+ D GN
Sbjct: 230 PFNVSYVSQMFAKVALDH--REIFEE----RTKFIVEE-RERMKSALREMGYRITDSRGN 282
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFVTLAA 43
K ++DE+ + +DA++ +++F EF++L A
Sbjct: 54 KAVIDEIFQGLDANQDEQVDFQEFISLVA 82
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 45 TLDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 45 LDELFEELDKNGDGEVSFEEFQVLVKK 71
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 46 TLDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 22/29 (75%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFVTLAA 43
K ++DE+ + +DA++ +++F EF++L A
Sbjct: 50 KAVIDEIFQGLDANQDEQVDFQEFISLVA 78
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQ---LTNEELDGMIDEIDSDGSGTVDFD 112
++++AF + D+D +G+I LK L+ LT+ E + + D DG G + D
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVD 100
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 45 TLDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 46 TLDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 45 TLDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDDQLTN-EELDGMIDEIDSDGSGTVDFD 112
EL F DKDG+ + KE L +L + + + + +EID++GSG V FD
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFD 190
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDEAMQKELREAFRLYDKDGNGYIPTSC 77
++ +++ +D + G + + EF+ ++ L+ AF DKD +GYI S
Sbjct: 75 INRILQALDINDRGNITYTEFMAGCYRW-----KNIESTFLKAAFNKIDKDEDGYISKSD 129
Query: 78 LKEILRELDDQLTNEELDGMIDEIDSDGSG 107
+ ++ D L N ++D + S G
Sbjct: 130 IVSLVH--DKVLDNNDIDNFFLSVHSIKKG 157
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D + G + F+EF L K
Sbjct: 49 TLDELFEELDKNGDGEVSFEEFQVLVKK 76
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTVDFD 112
++++AF + D+D +G+I LK L+ LT+ E + DSDG G + D
Sbjct: 43 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 101
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDDE 52
+LD +++++D D G+L+F EF+ L + D
Sbjct: 57 VLDRMMKKLDLDSDGQLDFQEFLNLIGGLAIACHDS 92
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTVDFD 112
++++AF + D+D +G+I LK L+ LT+ E + DSDG G + D
Sbjct: 42 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 100
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 53 AMQKELREAFRLYDKDGNGYIPTSCLKEILRELDDQL 89
+ ++L+ AF LYD + +GYI + I++ + D +
Sbjct: 6 TVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMM 42
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIVEEDD 51
L + DA++SGRLE +EF L + V D
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTELRVRPAD 62
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 59 REAFRLYDKDGNGYIPTSCLKEILRELDDQLTNEELDGMID 99
++ F L+DK G G I L + LR + TN+ + +I+
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 67 KDGNGY-IPTSCLKEILRE-----LDDQLTNEELDGMIDEIDSDGSGTVDF 111
K+G+ Y + LKE+L+ LD Q + +D ++ E+D DG G VDF
Sbjct: 21 KEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDF 71
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIV 47
+D++++E+D D G ++F E+V L A V
Sbjct: 54 VDKVMKELDEDGDGEVDFQEYVVLVAALTV 83
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAKFIV 47
+D++++E+D + G ++F EFV L A V
Sbjct: 54 VDKIMKELDENGDGEVDFQEFVVLVAALTV 83
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 25.8 bits (55), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 18 LDELIEEVDADKSGRLEFDEFVTLAAK 44
LDEL EE+D G + F+EF L K
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKK 72
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 17 ILDELIEEVDADKSGRLEFDEFVTL 41
+LD +++++D + G+L+F EF+ L
Sbjct: 55 VLDRMMKKLDLNSDGQLDFQEFLNL 79
>pdb|1VJB|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With 4-
Hydroxytamoxifen
pdb|1VJB|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With 4-
Hydroxytamoxifen
pdb|1TFC|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With A
Steroid Receptor Coactivator-1 Peptide
pdb|1TFC|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With A
Steroid Receptor Coactivator-1 Peptide
pdb|2P7A|A Chain A, Crystal Structure Of Estrogen Related Receptor G In
Complex With 3-Methyl Phenol
pdb|2P7G|A Chain A, X-Ray Structure Of Estrogen Related Receptor G In Complex
With Bisphenol A.
pdb|2P7Z|A Chain A, Estrogen Related Receptor Gamma In Complex With 4-Hydroxy-
Tamoxifen
Length = 251
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 140 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 196
>pdb|1S9Q|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
4-Hydroxytamoxifen
pdb|1S9Q|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
4-Hydroxytamoxifen
Length = 251
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 140 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 196
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 53 AMQKELREAFRLYDKDGNGYI 73
++ +L+ F++YDKD NG I
Sbjct: 92 TLEHKLKWTFKIYDKDRNGCI 112
>pdb|2E2R|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With Bisphenol A
pdb|2ZAS|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With 4-Alpha-Cumylphenol,
A Bisphenol A Derivative
pdb|2ZBS|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Apo Form
pdb|2ZKC|A Chain A, Crystal Structure Of Human Estrogen-Related Receptor Gamma
Ligand Binding Domain Complex With Bisphenol Z
Length = 244
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 132 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 188
>pdb|1S9P|A Chain A, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|B Chain B, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|C Chain C, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
pdb|1S9P|D Chain D, Crystal Structure Of The Ligand-Binding Domain Of The
Estrogen-Related Receptor Gamma In Complex With
Diethylstilbestrol
Length = 227
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 116 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 172
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTV 109
++++ F + DKD +G+I L IL+ L+ +E ++ D DG G +
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKI 97
>pdb|1KV6|A Chain A, X-Ray Structure Of The Orphan Nuclear Receptor Err3
Ligand- Binding Domain In The Constitutively Active
Conformation
pdb|1KV6|B Chain B, X-Ray Structure Of The Orphan Nuclear Receptor Err3
Ligand- Binding Domain In The Constitutively Active
Conformation
pdb|2GP7|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|B Chain B, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|C Chain C, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GP7|D Chain D, Estrogen Related Receptor-Gamma Ligand Binding Domain
pdb|2GPO|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Synthetic Peptide From Rip140
pdb|2GPP|A Chain A, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Rip140 Peptide And Synthetic Ligand
Gsk4716
pdb|2GPP|B Chain B, Estrogen Related Receptor-Gamma Ligand Binding Domain
Complexed With A Rip140 Peptide And Synthetic Ligand
Gsk4716
pdb|2GPU|A Chain A, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen
pdb|2GPV|A Chain A, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|B Chain B, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|C Chain C, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|D Chain D, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|E Chain E, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
pdb|2GPV|F Chain F, Estrogen Related Receptor-gamma Ligand Binding Domain
Complexed With 4-hydroxy-tamoxifen And A Smrt Peptide
Length = 230
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 119 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 175
>pdb|2WCE|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCE|B Chain B, Calcium-Free (Apo) S100a12
Length = 95
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 9/29 (31%), Positives = 21/29 (72%)
Query: 15 KKILDELIEEVDADKSGRLEFDEFVTLAA 43
K ++DE+ + +DA++ +++F EF++ A
Sbjct: 54 KAVIDEIFQGLDANQDEQVDFQEFISXVA 82
>pdb|2EWP|A Chain A, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|B Chain B, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|C Chain C, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|D Chain D, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
pdb|2EWP|E Chain E, Crystal Structure Of Estrogen Related Receptor-3
(Err-Gamma) Ligand Binding Domaind With Tamoxifen Analog
Gsk5182
Length = 226
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 19 DELIEEVDADKSGRLEFDEFVTLAAKFIVE------EDDEAMQK---ELREAFRLYD 66
+ +++ V KS +LE +EFVTL A + ED EA+QK L EA + Y+
Sbjct: 115 NAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDVLHEALQDYE 171
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 57 ELREAFRLYDKDGNGYIPTSCLKEILRELDD---QLTNEELDGMIDEIDSDGSGTV 109
++++ F + DKD +G+I L IL+ L+ +E ++ D DG G +
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.139 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,796,307
Number of Sequences: 62578
Number of extensions: 158345
Number of successful extensions: 1256
Number of sequences better than 100.0: 358
Number of HSP's better than 100.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 418
Number of HSP's gapped (non-prelim): 748
length of query: 115
length of database: 14,973,337
effective HSP length: 78
effective length of query: 37
effective length of database: 10,092,253
effective search space: 373413361
effective search space used: 373413361
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)