BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12127
(263 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC + + I CQ+ G+LVC++C +L CP CR + RN+A+E++
Sbjct: 35 LASLFECPVCFDYVLPPILQCQS-GHLVCSNCRPKLTCCPTCRGPLGSI--RNLAVEKVA 91
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC++ LP K+ +HE+ C+FR CP +C W S+ + HL
Sbjct: 92 NSVLFPCKYSASGCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ 151
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 152 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGFHFMLVL 193
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC + + I CQ+ G+LVC++C +L CP CR + RN+A+E++
Sbjct: 35 LASLFECPVCFDYVLPPILQCQS-GHLVCSNCRPKLTCCPTCRGPLGSI--RNLAMEKVA 91
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC++ LP ++ +HE+ C+FR CP +C W S+ + HL
Sbjct: 92 NSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ 151
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 152 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGFHFMLVL 193
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC + + I CQ+ G+LVC++C +L CP CR + RN+A+E++
Sbjct: 35 LASLFECPVCFDYVLPPILQCQS-GHLVCSNCRPKLTCCPTCRGPLGSI--RNLAMEKVA 91
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC++ LP ++ +HE+ C+FR CP +C W S+ + HL
Sbjct: 92 NSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ 151
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 152 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGFHFMLVL 193
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC + + I CQ+ G+LVC++C +L CP CR + RN+A+E++
Sbjct: 35 LASLFECPVCFDYVLPPILQCQS-GHLVCSNCRPKLTCCPTCRGPLGSI--RNLAMEKVA 91
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC++ LP ++ HE+ C+FR CP +C W S+ + HL
Sbjct: 92 NSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQ 151
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 152 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGFHFMLVL 193
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC + + I CQ+ G+LVC++C +L CP CR + RN+A+E++
Sbjct: 35 LASLFECPVCFDYVLPPILQCQS-GHLVCSNCRPKLTCCPTCRGPLGSI--RNLAMEKVA 91
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC+V LP + +HE+ C+FR CP +C W S+ + HL
Sbjct: 92 NSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQ 151
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 152 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGFHFMLVL 193
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I CQ G+LVC C +L CP CR ++ S RN+A+E++
Sbjct: 63 LTSLFECPVCFDYVLPPILQCQA-GHLVCNQCRQKLSCCPTCRASLTPSI-RNLAMEKVA 120
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ + PC+ GC + L ++ +HED C++R CP +C W S+ ++ +HL
Sbjct: 121 SAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHS 180
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFI 178
H + L+G + ++ + +V++ C++ +F+
Sbjct: 181 HKSITTLQGEDIVFLATDINLPGAVD------WVMMQYCFNHHFM 219
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 14 KELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALE 73
+ + ++ EC VC + I C G+L+C++C ++L CP CR+ + + R++A+E
Sbjct: 97 DDFLMALLECPVCFGYIMPPIMQCPR-GHLICSTCRSKLTICPVCRVFM--TNIRSLAME 153
Query: 74 RIFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPM--HACPWTNSVLHLSEHL 131
++ +KL PC++ FGC+ L A++ KHE+ C+ R CP C W + + +HL
Sbjct: 154 KVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHL 213
Query: 132 NQVH-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H ++ ++GN + +N + + ++ +C+ ++F+ L
Sbjct: 214 MSSHENVITMEGNDIIFLATNVNLE------GALDWTMVQSCHGRHFLLSL 258
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I CQ G+LVC C +L CP CR + S RN+A+E++
Sbjct: 74 LTSLFECPVCFDYVLPPILQCQA-GHLVCNQCRQKLSCCPTCRGALTPSI-RNLAMEKVA 131
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ + PC+ GC + L ++ +HED C++R CP +C W S+ + HL
Sbjct: 132 SAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHA 191
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 192 HKSITTLQGEDIVFLATDINLPGAV------DWVMMQSCFGHHFMLVL 233
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I CQ G+LVC C +L CP CR + S RN+A+E++
Sbjct: 75 LTSLFECPVCFDYVLPPILQCQA-GHLVCNQCRQKLSCCPTCRGALTPSI-RNLAMEKVA 132
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ + PC+ GC + L ++ +HED C++R CP +C W S+ + HL
Sbjct: 133 SAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHA 192
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 193 HKSITTLQGEDIVFLATDINLPGAV------DWVMMQSCFGHHFMLVL 234
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I CQ G+LVC C +L CP CR + S RN+A+E++
Sbjct: 75 LTSLFECPVCFDYVLPPILQCQA-GHLVCNQCRQKLSCCPTCRGALTPSI-RNLAMEKVA 132
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ + PC+ GC + L ++ +HED C++R CP +C W S+ + HL
Sbjct: 133 SAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHA 192
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 193 HKSITTLQGEDIVFLATDINLPGAV------DWVMMQSCFGHHFMLVL 234
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ ++ EC VC + + I CQ G+LVC C +L CP CR + S RN+A+E++
Sbjct: 83 LTALFECPVCFDYVLPPILQCQA-GHLVCNQCRQKLSCCPTCRGPLTPSI-RNLAMEKVA 140
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ L PC+ GC + L +++ +HE+ C+FR CP +C W S+ + HL
Sbjct: 141 STLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHA 200
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 201 HKSITTLQGEDIVFLATDINLPGAVD------WVMMQSCFGHHFMLVL 242
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+AS+ EC VC++ I CQ+ G++VC SC ++L CP CR +D RN+A+E++
Sbjct: 120 LASLFECPVCMDYALPPIMQCQS-GHIVCASCRSKLSSCPTCRGNLDN--IRNLAMEKLA 176
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCP--MHACPWTNSVLHLSEHLNQV 134
+ + PC+ GC + +HE C++R CP +C W + + HL V
Sbjct: 177 SSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQVMPHL--V 234
Query: 135 HH---LHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKLCLYKKVLTMS 191
HH + L+G +I T +S +V++ +C+ F+ L ++V
Sbjct: 235 HHHKSITTLQGE----DIVFLATDISLPGAV--DWVMMQSCFGHSFMLVLEKQERVPDQI 288
Query: 192 FVQI 195
F +
Sbjct: 289 FFAL 292
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 16 LIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALER 74
L I +C +C E L I C G+L C SC +L KCP C + + +S R A+E
Sbjct: 31 LDLDILDCPICCEALTSPIFQCDN-GHLACGSCCPKLSNKCPACTLPVGHSRSR--AMES 87
Query: 75 IFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQV 134
+ + +PC N RFGC K HE +C F Q CP C +T S L H
Sbjct: 88 VLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLT 147
Query: 135 HHLHLL 140
H ++
Sbjct: 148 HSTNIF 153
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
I S+ EC VCLE + C + G+LVC++C +L CP CR RN+ LE+I
Sbjct: 150 ILSVFECPVCLEYMLPPYMQC-SSGHLVCSNCRPKLQCCPTCRGPTPSV--RNLGLEKIA 206
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQL--KCPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC + A + +HE+ C+FR CP +C W + + EHL ++
Sbjct: 207 NTVRFPCKFSTSGCPLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKI 266
Query: 135 H-HLHLLKGNGV 145
H + L+G +
Sbjct: 267 HKSITTLQGEDI 278
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I C + G+LVC SC ++L CP CR + + RN+A+E++
Sbjct: 84 LTSLFECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRGPL--ANIRNLAMEKVA 140
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQL--KCPMHACPWTNSVLHLSEHLNQV 134
+ ++ PC++ +GC L ++ +HE+ C+ R CP +C W + + +HL
Sbjct: 141 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 200
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 201 HKSITTLQGEDIVFLATDINLPGAVD------WVMMQSCFGHHFMLVL 242
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I C + G+LVC SC ++L CP CR + + RN+A+E++
Sbjct: 67 LTSLFECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRGPL--ANIRNLAMEKVA 123
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQL--KCPMHACPWTNSVLHLSEHLNQV 134
+ ++ PC++ +GC L ++ +HE+ C+ R CP +C W + + +HL
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 184 HKSITTLQGEDIVFLATDINLPGAVD------WVMMQSCFGHHFMLVL 225
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I C + G+LVC SC ++L CP CR + + RN+A+E++
Sbjct: 67 LTSLFECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRGPL--ANIRNLAMEKVA 123
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQL--KCPMHACPWTNSVLHLSEHLNQV 134
+ ++ PC++ +GC L ++ +HE+ C+ R CP +C W + + +HL
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ + +V++ +C+ +F+ L
Sbjct: 184 HKSITTLQGEDIVFLATDINLPGAVD------WVMMQSCFGHHFMLVL 225
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERI 75
+ + EC VC + I C G+ +C++C AR+ +CP CR + R +ALE++
Sbjct: 57 VHELLECPVCTNSMYPPIHQCHN-GHTLCSTCKARVHNRCPTCRQEL--GDIRCLALEKV 113
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHA--CPWTNSVLHLSEHLNQ 133
LELPC++ GC P + KHE C FR CP C T + L HL
Sbjct: 114 AESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRD 173
Query: 134 VHHLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKLCLYKKVLTMSFV 193
H + + G N + E+ T + + + +C+ QYF CL+ + +
Sbjct: 174 DHKVDMHSGCTFNHRYVKSNPREVENATWM---LTVFHCFGQYF----CLHFEAFQLGMA 226
Query: 194 QI 195
+
Sbjct: 227 PV 228
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
+ S+ EC VC + + I C + G+LVC SC ++L CP CR + + RN+A+E +
Sbjct: 67 LTSLFECPVCFDYVLPPILQCSS-GHLVCVSCRSKLTCCPTCRGPL--ANIRNLAMEEVA 123
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQL--KCPMHACPWTNSVLHLSEHLNQV 134
+ ++ PC++ +GC L ++ +HE+ C+ R CP +C W + + +HL
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 135 H-HLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKL 181
H + L+G + ++ +V++ +C+ +F+ L
Sbjct: 184 HKSITTLQGEDIVFLATDINLP------GAVDWVMMQSCFGHHFMLVL 225
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 13/182 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERI 75
+ + EC VC + I C G+ +C++C +R+ +CP CR + R +ALE++
Sbjct: 40 VYELLECPVCTNSMYPPIHQCHN-GHTLCSTCKSRVHNRCPTCRQELGDI--RCLALEKV 96
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHA--CPWTNSVLHLSEHLNQ 133
LELPC+ + GC P + KHE +C FR CP C + L HL
Sbjct: 97 AESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRD 156
Query: 134 VHHLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKLCLYKKVLTMSFV 193
H + + G N + E+ T + + + C+ QYF CL+ + +
Sbjct: 157 DHKVDMHTGCTFNHRYVKSNPREVENATWM---LTVFQCFGQYF----CLHFEAFQLGMA 209
Query: 194 QI 195
+
Sbjct: 210 PV 211
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERI 75
+ + EC VC + I C G+ +C++C R+ +CP CR + R +ALE++
Sbjct: 58 VYELLECPVCTYSMYPPIHQCHN-GHTLCSTCKVRVHNRCPTCRQEL--GDIRCLALEKV 114
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHA--CPWTNSVLHLSEHLNQ 133
LELPC+ + GC P + KHE C FR CP C + L HL
Sbjct: 115 AESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRD 174
Query: 134 VHHLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYF 177
H + + G+ N + E+ T + + + +C+ QYF
Sbjct: 175 DHKVDMHAGSTFNHRYVKSNPREVENATWM---LTVFHCFGQYF 215
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIF 76
I S+ EC VCLE + C + G+LVC++C +L CP CR RN+ LE+I
Sbjct: 165 ILSVFECPVCLEYMLPPYMQCPS-GHLVCSNCRPKLQCCPTCRGPTPSV--RNLGLEKIA 221
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLK--CPMHACPWTNSVLHLSEHLNQV 134
+ PC+ GC + + HE+ C++R CP +C W ++ + +HL +V
Sbjct: 222 NTVRFPCKFSNSGCPLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKV 281
Query: 135 H-HLHLLKGNGV 145
H + L+G +
Sbjct: 282 HKSITTLQGEDI 293
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 17/234 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLK-CPFCRITIDYSWQRNVALERI 75
+ + EC VC + I C G+ +C+SC R+ CP CR + R +ALE++
Sbjct: 51 VYELLECPVCTNLMYPPIHQCPN-GHTLCSSCKLRVQNTCPTCRYELGNI--RCLALEKV 107
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHA--CPWTNSVLHLSEHLNQ 133
LE+PCR GC+ P + KHE C+FR CP C T + L +HL
Sbjct: 108 AESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKD 167
Query: 134 VHHLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKLCLYKKVLT---M 190
H + + G N E+ T + + + NC+ + F ++ + M
Sbjct: 168 DHKVDMHDGCTFNHRYVKSNPHEVENATWM---LTVFNCFGRQFCLHFEAFQLGMAPVYM 224
Query: 191 SFVQI----SNSSPFHFGVFVNIASNFKSMKGIV-PIHYACPELHISCDALVTP 239
+F++ + + F + + V S + +GI I + ++ S D L+ P
Sbjct: 225 AFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIP 278
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Query: 19 SISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERIFT 77
I +C +C + L + C G+L C+SC +L KCP C + + + R A+ER+
Sbjct: 41 DILDCPICYQALKIPVFQCGN-GHLACSSCCPKLRNKCPACALPVGHIRCR--AMERVLE 97
Query: 78 KLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVH 135
+ +PCR GC + + HE C F CP+ C +T S L EH + H
Sbjct: 98 SVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTH 155
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 18 ASISECGVCLEPLDRGITSCQTCGNLVCTSCAARL-LKCPFCRITIDYSWQRNVALERIF 76
+ + +C C EPL R I C G+L C+SC +L KC FCR I R A+E++
Sbjct: 81 SDVLDCPTCCEPLKRPIYQCSN-GHLACSSCCQKLNKKCSFCRCNIGDI--RCRAMEKVI 137
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVHH 136
+PC N + GCK + HE CKF + CP+ C + +S +L H H
Sbjct: 138 EASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAH 197
Query: 137 L 137
+
Sbjct: 198 V 198
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 12 NCKELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNV 70
+ K L + +C VC EPL C G++VC C A++ KCP + +R
Sbjct: 32 SAKLLDLDVLDCPVCFEPLTIPTFQCDD-GHIVCNFCFAKVSNKCPGPGCDLPIGNKRCF 90
Query: 71 ALERIFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEH 130
A+ER+ +PC+N FGC + K HE +C + Q CP C +T S + H
Sbjct: 91 AMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGH 150
Query: 131 LNQVH 135
+ H
Sbjct: 151 FMRRH 155
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 16 LIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALER 74
L + +C +C EPL I C G+L CT C ++ +CP C + I Y R A+E+
Sbjct: 106 LDPDVLDCPICCEPLKIPIFQCDN-GHLACTLCCTKVRNRCPSCTLPIGYVRCR--AMEK 162
Query: 75 IFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQV 134
+ + C N ++GCK R HE C F CP+ C +T L+ H+
Sbjct: 163 VIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAE 222
Query: 135 HHLHLLK---GNGVNIEIS-NFKTKVSESETKVHKYVI 168
H L+ + I + N KT + + E H V+
Sbjct: 223 HKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVV 260
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 20 ISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERIFTK 78
I +C +C E I C G+L C+SC +L KCP C + ++ R A+E +
Sbjct: 48 ILDCPICYEAFTIPIFQCDN-GHLACSSCCPKLNNKCPACTSPVGHNRCR--AMESVLES 104
Query: 79 LELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVH 135
+ +PC N + GCK + K HE +C F CP C +T+S L H H
Sbjct: 105 ILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITH 161
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLK-CPFCRITIDYSWQRNVALERI 75
+ + EC VC + I C G+ +C++C R+ CP CR + R +ALE++
Sbjct: 54 VYELLECPVCTNLMYPPIHQCPN-GHTLCSNCKLRVQNTCPTCRYELGNI--RCLALEKV 110
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHA--CPWTNSVLHLSEHLNQ 133
LE+PCR GC P + KHE C+FR CP C T + L HL
Sbjct: 111 AESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKD 170
Query: 134 VHHLHLLKGNGVNIEISNFKTKVSESETKVHKYVILMNCYSQYFICKLCLYKKVLTMSFV 193
H + + G N E+ T + + + NC+ + F CL+ + +
Sbjct: 171 DHKVDMHDGCTFNHRYVKSNPHEVENATWM---LTVFNCFGRQF----CLHFEAFQLGMA 223
Query: 194 QI 195
+
Sbjct: 224 PV 225
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 23 CGVCLEPLDRGITSCQTCGNLVCTSCAARLLK----CPFCRITIDYSWQRNV-ALERIFT 77
C VC L R + C ++ C C R L CP CR + + +V L++I
Sbjct: 20 CSVCHGVLKRPVRL--PCSHIFCKKCILRWLARQKTCPCCRKEVRHRKMVHVNKLQKIIG 77
Query: 78 KLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVHH 136
+LE+ CRN GC+V P A R H+D C F + CP C L EH H
Sbjct: 78 RLEVKCRNAEAGCQVTCPLAHRKGHQDSCPFELMVCPNEGCMLRVPRGALDEHRQNCQH 136
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSCAARL-LKCPFCRITIDYSWQRNVALERIFTKLE 80
+C +C L I C G++ C+SC ++ KCP+C + I + R+ LE+I +
Sbjct: 48 DCPICYHKLGAPIYQCDN-GHIACSSCCKKVKYKCPYCSLRIGFF--RSRILEKIVEAVV 104
Query: 81 LPCRNFRFGCKVYLP--KAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVH 135
+ C N ++GC +P HE C+F CP C +T L H + H
Sbjct: 105 VSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEH 161
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 16 LIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALER 74
L I +C +C E L I C+ G+L C+SC +L KCP C +E
Sbjct: 28 LDLDILDCPICCEGLTCPIFQCEN-GHLACSSCCPKLRNKCPAC------------PMEN 74
Query: 75 IFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQV 134
I + + C N FGC K+ HE++C F CP C ++ L +H
Sbjct: 75 ILESILVTCPNDMFGCTESFLYGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKLT 134
Query: 135 H 135
H
Sbjct: 135 H 135
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-KCPFCRITIDYSWQRNVALERIFTKLE 80
+C +C L I C G++ C+SC +L KCP C + I R+ +ER+ +
Sbjct: 43 DCPICCHALTSPIFQCDN-GHIACSSCCTKLRNKCPSCALPIGNF--RSRIMERVVEAVM 99
Query: 81 LPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVHH 136
+ C N + GC K HE C+F CP C ++ L H H+
Sbjct: 100 VTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHY 155
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 18 ASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLK-CPFCRITIDYSWQRNVALERIF 76
+++ EC C +PL + I C G+L C C +L K C FC++ I R A+E++
Sbjct: 81 SNVLECPNCFDPLKKPIFQCNN-GHLACFLCCIKLKKRCSFCKLPIGDVRCR--AMEKVI 137
Query: 77 TKLELPCRNFRFGCKVYLPKAKR-DKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLNQVH 135
+ C N +GCK + HE C F CP+ C + L H H
Sbjct: 138 KAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATH 197
Query: 136 HL 137
+
Sbjct: 198 KV 199
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1
Length = 245
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 40 CGNLVCTSCAARLLK----CPFCRITIDYSWQRNV-ALERIFTKLELPCRNFRFGCKVYL 94
C ++ C C R L CP CR + ++ L + +LE+ C+N GC V
Sbjct: 35 CSHIFCKKCILRWLARQKTCPCCRKEVKRKKVVHMNKLRKTIGRLEVKCKNADAGCIVTC 94
Query: 95 PKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEH 130
P A R H+D C F CP C L+EH
Sbjct: 95 PLAHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEH 130
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1
Length = 239
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 40 CGNLVCTSCAARLLK----CPFCRITIDYSWQRNV-ALERIFTKLELPCRNFRFGCKVYL 94
C ++ C C R L CP CR + V L + +L++ C+N GC
Sbjct: 35 CSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEVNKLRKTIGRLQVKCKNAAAGCLDTH 94
Query: 95 PKAKRDKHEDKCKFRQLKCPMHAC 118
P A R +H+D C F + CP C
Sbjct: 95 PLAHRKEHQDSCPFELMACPNEGC 118
>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2
SV=1
Length = 375
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 19/131 (14%)
Query: 14 KELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLK----------CPFCRITID 63
+E + S+ C VCL+ + C T G+L+C C LL CP CR I
Sbjct: 73 EERLYSVLCCTVCLDLPKASVYQC-TNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEIS 131
Query: 64 YSWQ-RNVALERIFTKLELPCRNFRFGCKVYLPKAKRDKHE-DKCKFRQLKCP--MHACP 119
S RN+A+E+ ++L C C P++ D+H+ ++C+ R +C CP
Sbjct: 132 KSLCCRNLAVEKAVSELPSECSY----CLKQFPRSGLDRHQTEECQDRVTQCKYKRIGCP 187
Query: 120 WTNSVLHLSEH 130
W LS H
Sbjct: 188 WQGPFHELSAH 198
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 40.0 bits (92), Expect = 0.017, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 3 CKKEPECCANCKELIAS---ISECGVCLEPLDRGITSCQTCGNLV-CTSCAARLLKCPFC 58
C + C C+E ++S I EC VC + R + CG++V C C+A + KC C
Sbjct: 994 CAPRVKKCLICRETVSSREKIDECLVCSD--RRAAVFFRPCGHMVACEHCSALMKKCVLC 1051
Query: 59 RITID 63
R ID
Sbjct: 1052 RTQID 1056
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 18 ASISECGVCLEPLDRGITSCQTCGNL-VCTSCAARLLKCPFCRITI 62
AS+ EC VC + + T + CG++ C +CA R+ KC CR T+
Sbjct: 965 ASLDECLVCSDA--KRDTVFKPCGHVSCCETCAPRVKKCLICRETV 1008
Score = 32.0 bits (71), Expect = 4.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 14 KELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITID 63
K+ + I E +C DR CG+ C C ++ CP CR T++
Sbjct: 1171 KQQLQDIKEQTMCPVCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVE 1220
>sp|Q6IWL4|TRAF6_DANRE TNF receptor-associated factor 6 OS=Danio rerio GN=traf6 PE=2 SV=2
Length = 542
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 17 IASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-----KCPFCRITI--DYSWQRN 69
+ S EC +CL L + + CG+ C SC + + KCP + + + N
Sbjct: 65 LESKYECPICLMGLRSAVQT--PCGHRFCDSCIRKSIRDTGQKCPVDNEVLLEEQLFPDN 122
Query: 70 VALERIFTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSE 129
A I + L + C NF GC + + +KH +C+F CP C + + HL E
Sbjct: 123 FAKREILS-LTVKCSNF--GCSEKMELRQLEKHLSQCRFATAPCPQ--CQESVPISHLDE 177
Query: 130 HLNQ 133
H +Q
Sbjct: 178 HKSQ 181
>sp|Q6ZMN7|PZRN4_HUMAN PDZ domain-containing RING finger protein 4 OS=Homo sapiens
GN=PDZRN4 PE=1 SV=3
Length = 1036
Score = 37.7 bits (86), Expect = 0.075, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSC----AARLLKCPF-CRITIDYSWQRNVALERIF 76
EC +C + L+ + C CG++ C SC A R +CP C+ R + L +
Sbjct: 17 ECKLCGQVLEEPL--CTPCGHVFCASCLLPWAVRRRRCPLQCQPLAPGELYRVLPLRSLI 74
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKF 108
KL + C GC + + + H + C F
Sbjct: 75 QKLRVQCDYRARGCGHSVRLHELEAHVEHCDF 106
>sp|Q9BUZ4|TRAF4_HUMAN TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1
Length = 470
Score = 37.7 bits (86), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 23 CGVCLEPLDRGITSCQTCGNLVCTSCAARLL-----KCPFCRITIDYS-WQRNVALERIF 76
C +C +P+ R TCG+ C +C L KCP ++ +DY+ + LE
Sbjct: 18 CPLCGKPM-REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQV 76
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLN 132
L + C + GC+ P H + C F + CP + CP S L HL
Sbjct: 77 LGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCP-NRCPMKLSRRDLPAHLQ 131
>sp|O94972|TRI37_HUMAN E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens GN=TRIM37 PE=1
SV=2
Length = 964
Score = 37.4 bits (85), Expect = 0.11, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 15 ELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-----KCPFCR 59
E IA + C +C+E L R C C L C SC R L +CP CR
Sbjct: 7 ESIAEVFRCFICMEKL-RDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCR 55
>sp|Q6PCX9|TRI37_MOUSE E3 ubiquitin-protein ligase TRIM37 OS=Mus musculus GN=Trim37 PE=2
SV=1
Length = 961
Score = 37.4 bits (85), Expect = 0.12, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 15 ELIASISECGVCLEPLDRGITSCQTCGNLVCTSCAARLL-----KCPFCR 59
E IA + C +C+E L R C C L C SC R L +CP CR
Sbjct: 7 ESIAEVFRCFICMEKL-RDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCR 55
>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus musculus GN=Traf4 PE=1 SV=2
Length = 470
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 23 CGVCLEPLDRGITSCQTCGNLVCTSCAARLL-----KCPFCRITIDYS-WQRNVALERIF 76
C +C +P+ R TCG+ C +C L KCP ++ +DY+ + LE
Sbjct: 18 CPLCGKPM-REPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQV 76
Query: 77 TKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHACPWTNSVLHLSEHLN 132
L + C + GC+ P H + C F + CP + CP S L HL
Sbjct: 77 LGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCP-NRCPAKLSRRDLPAHLQ 131
>sp|Q69ZS0|PZRN3_MOUSE E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus GN=Pdzrn3 PE=1
SV=3
Length = 1063
Score = 37.0 bits (84), Expect = 0.15, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSCAARLL----KCPF-CRITIDYSWQRNV-ALERI 75
+C +C + L+ +T+ CG++ C C + CP CR + +V L+R+
Sbjct: 17 KCALCHKVLEDPLTT--PCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVLPLKRL 74
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHAC 118
KL++ C + GC + +H ++C F +C C
Sbjct: 75 ILKLDIKCAHAARGCGRVVKLQDLPEHLERCDFAPARCRHAGC 117
>sp|Q9UPQ7|PZRN3_HUMAN E3 ubiquitin-protein ligase PDZRN3 OS=Homo sapiens GN=PDZRN3 PE=1
SV=2
Length = 1066
Score = 37.0 bits (84), Expect = 0.15, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSCAARLL----KCPF-CRITIDYSWQRNV-ALERI 75
+C +C + L+ +T+ CG++ C C + CP CR + +V L+R+
Sbjct: 17 KCALCHKVLEDPLTT--PCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVLPLKRL 74
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHAC 118
KL++ C GC + + +H ++C F +C C
Sbjct: 75 ILKLDIKCAYATRGCGRVVKLQQLPEHLERCDFAPARCRHAGC 117
>sp|P68907|PZRN3_RAT E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus GN=Pdzrn3
PE=1 SV=1
Length = 1062
Score = 37.0 bits (84), Expect = 0.16, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 22 ECGVCLEPLDRGITSCQTCGNLVCTSCAARLL----KCPF-CRITIDYSWQRNV-ALERI 75
+C +C + L+ +T+ CG++ C C + CP CR + +V L+R+
Sbjct: 17 KCALCHKVLEDPLTT--PCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKELNHVLPLKRL 74
Query: 76 FTKLELPCRNFRFGCKVYLPKAKRDKHEDKCKFRQLKCPMHAC 118
KL++ C + GC + +H ++C F +C C
Sbjct: 75 ILKLDIKCAHAARGCGRVVKLQDLPEHLERCDFAPARCRHAGC 117
>sp|Q6Q0C0|TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7 OS=Homo sapiens GN=TRAF7 PE=1
SV=1
Length = 670
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 18/115 (15%)
Query: 39 TCGNLVCTSCAARLLKCPFCRITIDYSWQRNVALERIFTKLELPCRN------------F 86
TCG+ C CA + KCP + + N+A+ +L + CR+ F
Sbjct: 145 TCGHTFCRRCALKSEKCPVDNVKLTVV-VNNIAVAEQIGELFIHCRHGCRVAGSGKPPIF 203
Query: 87 RF---GCKVYLPKAKRDKHEDKCKFRQLKCPMH-ACPWTNSVLHLSEHLNQVHHL 137
GC + + R HE C +R ++CP + +CP ++L HL + H+
Sbjct: 204 EVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLR-MNLEAHLKECEHI 257
>sp|Q922B6|TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7 OS=Mus musculus GN=Traf7 PE=1
SV=1
Length = 594
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 39 TCGNLVCTSCAARLLKCPF--CRITIDYSWQRNVALERIFTKLELPCRN----------- 85
TCG+ C CA + KCP ++T+ + N+A+ +L + CR+
Sbjct: 69 TCGHTFCRRCALKSEKCPVDNAKLTVVVN---NIAVAEQIGELFIHCRHGCHAAGTGKPG 125
Query: 86 -FRF---GCKVYLPKAKRDKHEDKCKFRQLKCPMH-ACPWTNSVLHLSEHLNQVHHL 137
F GC + + R HE C +R ++CP + +CP ++L HL + H+
Sbjct: 126 VFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCPPLLK-MNLEAHLKECEHI 181
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 36.2 bits (82), Expect = 0.22, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 3 CKKEPECCANCKELIAS---ISECGVCLEPLDRGITSCQTCGNL-VCTSCAARLLKCPFC 58
C + C CKE + S I EC VC + + Q CG++ C +CA+ + KC C
Sbjct: 841 CSPRVKKCLICKEQVQSRTKIEECVVCSD--KKAAVLFQPCGHMCACENCASLMKKCVQC 898
Query: 59 RITID 63
R ++
Sbjct: 899 RAVVE 903
Score = 34.3 bits (77), Expect = 0.86, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 23 CGVCLEPLDRGITSCQTCGNLVCTSCAARLLKCPFCRITID 63
C VCL+ L I CG+ C C R+ +CP CR I+
Sbjct: 987 CPVCLDRLKNMIF---MCGHGTCQLCGDRMSECPICRKAIE 1024
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.138 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,035,318
Number of Sequences: 539616
Number of extensions: 3683394
Number of successful extensions: 11742
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 11546
Number of HSP's gapped (non-prelim): 244
length of query: 263
length of database: 191,569,459
effective HSP length: 115
effective length of query: 148
effective length of database: 129,513,619
effective search space: 19168015612
effective search space used: 19168015612
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)