BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12129
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VNE7|C42ES_DROME CDC42 small effector protein homolog OS=Drosophila melanogaster
GN=Spec2 PE=1 SV=2
Length = 85
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 19 AGEMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSR 78
GE+WLQWFSCC Q +P R+ HQ +RIDRSMIG PTNF HTGHIGS DVEL +R
Sbjct: 4 TGEIWLQWFSCCFQQQRSPSRRPHQ---RLRIDRSMIGNPTNFVHTGHIGSADVELSANR 60
Query: 79 LRAIQNQMQSKGGYEAD 95
L AI QMQSKGGYE +
Sbjct: 61 LNAISTQMQSKGGYETN 77
>sp|Q5FVD7|C4S2A_XENLA CDC42 small effector protein 2-A OS=Xenopus laevis GN=cdc42se2-a
PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGYE ++ V + T++
Sbjct: 55 SIQNQMQSKGGYEGNISSNVQMQLVDTKA 83
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGYEADL 151
SGD+ G + + +IQNQMQSKGGYE ++
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGYEGNI 70
>sp|Q28EW5|C4S2A_XENTR CDC42 small effector protein 2-A OS=Xenopus tropicalis
GN=cdc42se2-A PE=3 SV=1
Length = 84
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY ++ V + T++
Sbjct: 55 SIQNQMQSKGGYGGNMSANVQMQLVDTKA 83
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGYEADL 151
SGD+ G + + +IQNQMQSKGGY ++
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGYGGNM 70
>sp|Q5R4F8|C42S2_PONAB CDC42 small effector protein 2 OS=Pongo abelii GN=CDC42SE2 PE=3
SV=1
Length = 84
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL FSCCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFSCCIAEQPQPKRRR-------RIDRSMIGEPTNFAHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY + V + T++
Sbjct: 55 SIQNQMQSKGGYGGGMPANVQMQLVDTKA 83
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGY 66
>sp|A6QLJ4|C42S2_BOVIN CDC42 small effector protein 2 OS=Bos taurus GN=CDC42SE2 PE=3 SV=1
Length = 84
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY + V + T++
Sbjct: 55 SIQNQMQSKGGYGGGMAANVQMQLVDTKA 83
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGY 66
>sp|A9JR56|C42S2_DANRE CDC42 small effector protein 2 OS=Danio rerio GN=cdc42se2 PE=3 SV=1
Length = 85
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 9/90 (10%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFTGMNSVN 54
Query: 81 AIQNQMQSKGGYEAD-LGVRVSARQTHTRS 109
+IQNQMQSKGGY + + V V + T++
Sbjct: 55 SIQNQMQSKGGYGGEAMSVNVQMQLVDTKA 84
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 43 SGDLFTGMNSVNSIQNQMQSKGGY 66
>sp|Q8BGH7|C42S2_MOUSE CDC42 small effector protein 2 OS=Mus musculus GN=Cdc42se2 PE=1
SV=1
Length = 84
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY + V + T++
Sbjct: 55 SIQNQMQSKGGYGGGMPANVQMQLVDTKA 83
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGY 66
>sp|Q9NRR3|C42S2_HUMAN CDC42 small effector protein 2 OS=Homo sapiens GN=CDC42SE2 PE=1
SV=1
Length = 84
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R RIDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPKRRR-------RIDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 54
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY + V + T++
Sbjct: 55 SIQNQMQSKGGYGGGMPANVQMQLVDTKA 83
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 43 SGDLFSGMNSVSSIQNQMQSKGGY 66
>sp|A1L1K4|C42S2_RAT CDC42 small effector protein 2 OS=Rattus norvegicus GN=Cdc42se2
PE=3 SV=2
Length = 83
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLR 80
E WL F+CCI + P+R+R IDRSMIGEPTNF HT H+GSGD+ G + +
Sbjct: 3 EFWL-CFNCCIAEQPQPRRRR--------IDRSMIGEPTNFVHTAHVGSGDLFSGMNSVS 53
Query: 81 AIQNQMQSKGGYEADLGVRVSARQTHTRS 109
+IQNQMQSKGGY + V + T++
Sbjct: 54 SIQNQMQSKGGYGGGMPANVQMQLVDTKA 82
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 124 SGDVELGNSRLRAIQNQMQSKGGY 147
SGD+ G + + +IQNQMQSKGGY
Sbjct: 42 SGDLFSGMNSVSSIQNQMQSKGGY 65
>sp|Q4V853|C4S2C_XENLA CDC42 small effector protein 2-C OS=Xenopus laevis GN=cdc42se2-c
PE=3 SV=1
Length = 75
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Query: 23 WLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAI 82
+L FSCCI + P+R+R RIDRSMIGEP NF HT H+GSGD G + +
Sbjct: 4 FLFCFSCCIGEQPQPKRRR-------RIDRSMIGEPMNFVHTAHVGSGDANTGFAMGGSF 56
Query: 83 QNQMQSKGGY 92
Q+QM+SKGGY
Sbjct: 57 QDQMKSKGGY 66
>sp|Q28GG3|C4S2B_XENTR CDC42 small effector protein 2-B OS=Xenopus tropicalis
GN=cdc42se2-B PE=3 SV=1
Length = 75
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Query: 23 WLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAI 82
+L FSCCI + P+R+R RIDRSMIGEP NF HT H+GSGD G + +
Sbjct: 4 FLFCFSCCIGEQPQPKRRR-------RIDRSMIGEPMNFVHTAHVGSGDTNAGFAMGGSF 56
Query: 83 QNQMQSKGGY 92
Q+QM+SKGGY
Sbjct: 57 QDQMKSKGGY 66
>sp|Q6AX78|C4S2B_XENLA CDC42 small effector protein 2-B OS=Xenopus laevis GN=cdc42se2-b
PE=3 SV=1
Length = 75
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
Query: 23 WLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAI 82
+L FSCCI + P+R+R RIDRSMIGEP NF HT H+GSGD G + +
Sbjct: 4 FLFCFSCCIGEQPQPKRRR-------RIDRSMIGEPMNFVHTAHVGSGDTNAGFAMGGSF 56
Query: 83 QNQMQSKGGY 92
Q+QM+SKGGY
Sbjct: 57 QDQMKSKGGY 66
>sp|Q8BHL7|C42S1_MOUSE CDC42 small effector protein 1 OS=Mus musculus GN=Cdc42se1 PE=3
SV=1
Length = 80
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGN--SR 78
E W + CC+ + P++KR RIDR+MIGEP NF H HIGSG++ G+ +
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRR------RIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAM 55
Query: 79 LRAIQNQMQSKGGY 92
A+Q QM+SKG +
Sbjct: 56 TGAVQEQMRSKGNH 69
>sp|Q9NRR8|C42S1_HUMAN CDC42 small effector protein 1 OS=Homo sapiens GN=CDC42SE1 PE=1
SV=1
Length = 79
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGN--SR 78
E W + CC+ + P++KR RIDR+MIGEP NF H HIGSG++ G+ +
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRR------RIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAM 55
Query: 79 LRAIQNQMQSKG 90
A+Q QM+SKG
Sbjct: 56 TGAVQEQMRSKG 67
>sp|Q5BIS3|C42S1_BOVIN CDC42 small effector protein 1 OS=Bos taurus GN=CDC42SE1 PE=3
SV=1
Length = 79
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGN--SR 78
E W + CC+ + P++KR RIDR+MIGEP NF H HIGSG++ G+ +
Sbjct: 3 EFWHK-LGCCVVEKPQPKKKRR------RIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAM 55
Query: 79 LRAIQNQMQSKG 90
A+Q QM+SKG
Sbjct: 56 TGAVQEQMRSKG 67
>sp|Q5BJM7|C42S1_RAT CDC42 small effector protein 1 OS=Rattus norvegicus GN=Cdc42se1
PE=3 SV=1
Length = 79
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGN--SR 78
E W + C + +P +R+R RIDR+MIGEP NF H HIGSG++ G+ +
Sbjct: 3 EFWHKLGCCVVEKPQPKKRRR-------RIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAM 55
Query: 79 LRAIQNQMQSKG 90
A+Q QM+SKG
Sbjct: 56 TGAVQEQMRSKG 67
>sp|Q5RDD6|C42S1_PONAB CDC42 small effector protein 1 OS=Pongo abelii GN=CDC42SE1 PE=3
SV=1
Length = 79
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Query: 21 EMWLQWFSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGN--SR 78
E W + C + +P +R+R RIDR+MIGEP NF H HIGSG++ G+ +
Sbjct: 3 EFWHKLGCCVVEKPQPKKRRR-------RIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAM 55
Query: 79 LRAIQNQMQSKG 90
A+Q QM+SKG
Sbjct: 56 TGAVQEQMRSKG 67
>sp|Q5ZKB1|C42S1_CHICK CDC42 small effector protein 1 OS=Gallus gallus GN=CDC42SE1 PE=3
SV=1
Length = 78
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 27 FSCCINQPTAPQRKRHQVRRPMRIDRSMIGEPTNFQHTGHIGSGDVELGNSR-LRAIQNQ 85
CC+ + P+++R RIDRSMIGEP NF H HIGSGD+ G + +
Sbjct: 8 LGCCVVEKPQPKKRRR------RIDRSMIGEPMNFVHLTHIGSGDMAAGEGLPMTGAVQE 61
Query: 86 MQSKGGYE 93
M+SKGG E
Sbjct: 62 MRSKGGRE 69
>sp|Q5BKH3|C42S1_XENTR CDC42 small effector protein 1 OS=Xenopus tropicalis GN=cdc42se1
PE=3 SV=1
Length = 79
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 50 IDRSMIGEPTNFQHTGHIGSGDVELGNSRLRA--IQNQMQSKGG 91
IDRSMIGEP NF H HIGSGD+ + RA +Q QM+SK G
Sbjct: 25 IDRSMIGEPMNFVHLTHIGSGDMGASDGLPRAGGVQEQMRSKCG 68
>sp|Q66KZ1|C4S1A_XENLA CDC42 small effector protein 1-A OS=Xenopus laevis GN=cdc42se1-a
PE=3 SV=1
Length = 79
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 50 IDRSMIGEPTNFQHTGHIGSGDVELGNSRLRA--IQNQMQSKGG 91
IDRSMIGEP NF H H+GSGD+ G+ A +Q QM+SK G
Sbjct: 25 IDRSMIGEPMNFVHLTHVGSGDMGAGDGLPMAGTVQQQMRSKCG 68
>sp|Q6GPV4|C4S1B_XENLA CDC42 small effector protein 1-B OS=Xenopus laevis GN=cdc42se1-b
PE=3 SV=1
Length = 79
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 50 IDRSMIGEPTNFQHTGHIGSGDVELGNSRLRA--IQNQMQSKGG 91
IDRSMIGEP NF H HIGSGD+ + +A +Q QM+SK G
Sbjct: 25 IDRSMIGEPMNFVHLTHIGSGDMGASDGLPKAGTVQEQMRSKCG 68
>sp|Q6TEL3|C42S1_DANRE CDC42 small effector protein 1 OS=Danio rerio GN=cdc42se1 PE=3
SV=1
Length = 75
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 50 IDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAIQNQMQSK 89
IDRSMIGEPTNF H HIGSG++ G I+ QM+SK
Sbjct: 25 IDRSMIGEPTNFVHLTHIGSGEMADGMQPSGPIKEQMRSK 64
>sp|Q7TT49|MRCKB_RAT Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus
GN=Cdc42bpb PE=1 SV=1
Length = 1713
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRID----RSMIGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D MI PTNF H H+G GD
Sbjct: 1562 VPEEERLQQRREMLRDPELRSKMISNPTNFNHVAHMGPGD 1601
>sp|Q9Y5S2|MRCKB_HUMAN Serine/threonine-protein kinase MRCK beta OS=Homo sapiens GN=CDC42BPB
PE=1 SV=2
Length = 1711
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRID----RSMIGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D MI PTNF H H+G GD
Sbjct: 1560 VPEEERLQQRREMLRDPELRSKMISNPTNFNHVAHMGPGD 1599
>sp|Q7TT50|MRCKB_MOUSE Serine/threonine-protein kinase MRCK beta OS=Mus musculus GN=Cdc42bpb
PE=1 SV=2
Length = 1713
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRID----RSMIGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D MI PTNF H H+G GD
Sbjct: 1562 VPEEERLQQRREMLRDPELRSKMISNPTNFNHVAHMGPGD 1601
>sp|Q3UU96|MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha OS=Mus musculus
GN=Cdc42bpa PE=1 SV=2
Length = 1719
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRIDRSM----IGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D M I PTNF H H+G GD
Sbjct: 1535 VPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGD 1574
>sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens
GN=CDC42BPA PE=1 SV=1
Length = 1732
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRIDRSM----IGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D M I PTNF H H+G GD
Sbjct: 1548 VPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGD 1587
>sp|O54874|MRCKA_RAT Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus
GN=Cdc42bpa PE=1 SV=1
Length = 1732
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 36 APQRKRHQVRRPMRIDRSM----IGEPTNFQHTGHIGSGD 71
P+ +R Q RR M D M I PTNF H H+G GD
Sbjct: 1548 VPEEERMQQRREMLRDPEMRNKLISNPTNFNHIAHMGPGD 1587
>sp|Q9W1B0|GEK_DROME Serine/threonine-protein kinase Genghis Khan OS=Drosophila
melanogaster GN=gek PE=1 SV=1
Length = 1637
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 43 QVRRPMRIDR--SMIGEPTNFQHTGHIGSGDVELGNSRLRAIQNQMQS 88
++ + ++ DR MI PTNF H H+G GD + N RL + +++
Sbjct: 1532 EINKTIKSDRRSKMISAPTNFNHISHMGPGD-GIQNQRLLDLPTTLET 1578
>sp|O08816|WASL_RAT Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus
GN=Wasl PE=1 SV=2
Length = 501
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 49 RIDRSMIGEPTNFQHTGHIG 68
R+ ++ IG P+NFQH GH+G
Sbjct: 194 RLTKADIGTPSNFQHIGHVG 213
>sp|Q91YD9|WASL_MOUSE Neural Wiskott-Aldrich syndrome protein OS=Mus musculus GN=Wasl
PE=1 SV=1
Length = 501
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 49 RIDRSMIGEPTNFQHTGHIG 68
R+ ++ IG P+NFQH GH+G
Sbjct: 194 RLTKADIGTPSNFQHIGHVG 213
>sp|O00401|WASL_HUMAN Neural Wiskott-Aldrich syndrome protein OS=Homo sapiens GN=WASL
PE=1 SV=2
Length = 505
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 49 RIDRSMIGEPTNFQHTGHIG 68
R+ ++ IG P+NFQH GH+G
Sbjct: 197 RLTKADIGTPSNFQHIGHVG 216
>sp|Q95107|WASL_BOVIN Neural Wiskott-Aldrich syndrome protein OS=Bos taurus GN=WASL PE=1
SV=1
Length = 505
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 49 RIDRSMIGEPTNFQHTGHIG 68
R+ ++ IG P+NFQH GH+G
Sbjct: 197 RLTKADIGTPSNFQHIGHVG 216
>sp|B2RPV6|MMRN1_MOUSE Multimerin-1 OS=Mus musculus GN=Mmrn1 PE=2 SV=2
Length = 1210
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 32 NQPTAPQRKRHQVRRPM-RIDRSMIGEPTNFQHTGHI----GSGDVELGNSRLRAIQ--- 83
++ + P RHQ P+ + +++ P + Q I G+G V L N+ L+ +Q
Sbjct: 86 SETSTPPEGRHQT--PLEKTGTAVVSLPLSLQDKPSIKPSTGAGTVMLANATLKFLQSFS 143
Query: 84 ---NQMQSKGGYEADLGVRVSARQTHTRSQRRYRKEDPNGSDSSGDVELGNS 132
+Q + D+G R SAR+TH R R + P+ S + G +
Sbjct: 144 RKSDQQEVSTKSAGDMGNR-SARETHLRRSDNSRNQRPSYQKPSFETTRGKN 194
>sp|P13470|GTFC_STRMU Glucosyltransferase-SI OS=Streptococcus mutans serotype c (strain
ATCC 700610 / UA159) GN=gtfC PE=1 SV=2
Length = 1455
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 49 RIDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAIQNQMQSKGGY--EADLGVRV----SA 102
R R+ GE F H G +G V RL N +Q+KG + +AD +R S
Sbjct: 1244 RFVRNSKGEWFLFDHNGVAVTGTVTFNGQRLYFKPNGVQAKGEFIRDADGHLRYYDPNSG 1303
Query: 103 RQTHTRSQRRYRKE----DPNGSDSSGDVELGNSRLRAIQNQMQSKG 145
+ R R + E D NG +G + RL N +Q+KG
Sbjct: 1304 NEVRNRFVRNSKGEWFLFDHNGIAVTGTRVVNGQRLYFKSNGVQAKG 1350
>sp|Q9FJK8|RP8L4_ARATH Probable disease resistance RPP8-like protein 4 OS=Arabidopsis
thaliana GN=RPP8L4 PE=2 SV=1
Length = 908
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 66 HIGSGDVELGNSRLRAIQNQMQSKGGYEADLGVRVSARQTHTRSQRRYRKEDPNGSDS 123
H + D+E R+ + +MQS G + GVR + Q R QR R+ P+ S+S
Sbjct: 106 HKVASDIEGITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQRVQREIRQTYPDSSES 163
>sp|Q9RN18|Y6513_BACAN Uncharacterized protein pXO2-14/BXB0013/GBAA_pXO2_0013 OS=Bacillus
anthracis GN=pXO2-14 PE=4 SV=2
Length = 952
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 47 PMRIDRSMIGEPTNFQHTGHIGSGDVELGNSRLRAIQNQMQSKGGYEADLGVRVSARQTH 106
P +R + +N + G+I G+ + + +QN++++ G E G S RQT
Sbjct: 609 PKIANRPNVASISNERQQGNI-KGERQTAEREIE-LQNKLRNTGKEEGKQGNVKSERQTA 666
Query: 107 TRSQRRYRKEDPNGSDSSGDVELGNSRLRA-----IQNQMQSKGGYEADLG 152
R K GS + R A IQN++++ GG EA G
Sbjct: 667 EREIELQNKLRNTGSTEGQQGNVKGERQTAEREIEIQNKLRNTGGTEASQG 717
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,096,277
Number of Sequences: 539616
Number of extensions: 2437506
Number of successful extensions: 3261
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3180
Number of HSP's gapped (non-prelim): 64
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)