Query psy1213
Match_columns 472
No_of_seqs 173 out of 1956
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 19:29:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3goa_A 3-ketoacyl-COA thiolase 100.0 1.5E-65 5.1E-70 525.5 37.4 377 46-466 1-387 (387)
2 1ulq_A Putative acetyl-COA ace 100.0 4.7E-65 1.6E-69 524.5 37.6 391 46-466 1-400 (401)
3 1afw_A 3-ketoacetyl-COA thiola 100.0 2.5E-65 8.5E-70 524.6 33.8 382 39-465 2-392 (393)
4 4dd5_A Acetyl-COA acetyltransf 100.0 1.6E-64 5.5E-69 519.5 37.8 385 46-465 6-396 (396)
5 2wu9_A 3-ketoacyl-COA thiolase 100.0 7E-65 2.4E-69 527.1 33.3 381 41-467 24-420 (442)
6 2iik_A 3-ketoacyl-COA thiolase 100.0 1.8E-64 6.1E-69 522.1 34.1 389 32-466 10-416 (418)
7 3ss6_A Acetyl-COA acetyltransf 100.0 9.2E-64 3.1E-68 513.7 36.9 386 45-466 3-394 (394)
8 2vu1_A Acetyl-COA acetyltransf 100.0 1.6E-63 5.5E-68 511.7 38.3 385 46-466 2-392 (392)
9 4e1l_A Acetoacetyl-COA thiolas 100.0 3.8E-63 1.3E-67 509.4 37.3 386 45-465 3-395 (395)
10 3svk_A Acetyl-COA acetyltransf 100.0 3.4E-63 1.2E-67 510.6 35.3 374 46-466 6-407 (407)
11 1wl4_A Acetyl-coenzyme A acety 100.0 1.2E-62 4.1E-67 505.9 38.2 386 46-466 5-397 (397)
12 1wdk_C 3-ketoacyl-COA thiolase 100.0 6.6E-63 2.3E-67 506.7 35.3 377 45-466 3-390 (390)
13 2ib8_A Acetyl-COA acetyltransf 100.0 5.6E-62 1.9E-66 500.8 34.5 384 45-466 6-395 (395)
14 4egv_A Acetyl-COA acetyltransf 100.0 5.8E-51 2E-55 430.5 25.9 385 41-467 10-424 (520)
15 3kzu_A 3-oxoacyl-(acyl-carrier 100.0 1.5E-34 5.1E-39 299.5 16.2 280 70-467 86-427 (428)
16 3o04_A LMO2201 protein, beta-k 100.0 1.7E-32 5.7E-37 283.2 23.8 278 70-468 73-413 (413)
17 1e5m_A KAS II, beta ketoacyl a 100.0 1.4E-32 4.8E-37 283.9 21.6 274 71-466 77-415 (416)
18 3ho9_A 3-oxoacyl-[acyl-carrier 100.0 1.3E-32 4.4E-37 285.1 20.0 275 71-466 88-427 (427)
19 1j3n_A 3-oxoacyl-(acyl-carrier 100.0 1.2E-32 4.2E-37 283.7 17.2 277 70-465 70-407 (408)
20 4ddo_A 3-oxoacyl-[acyl-carrier 100.0 4.1E-32 1.4E-36 283.1 18.8 278 70-469 101-445 (451)
21 2wge_A 3-oxoacyl-[acyl-carrier 100.0 3.5E-32 1.2E-36 280.7 17.4 271 71-465 83-415 (416)
22 2gqd_A 3-oxoacyl-[acyl-carrier 100.0 1.8E-31 6.1E-36 277.1 21.9 276 70-466 97-435 (437)
23 2ix4_A 3-oxoacyl-[acyl-carrier 100.0 3.4E-32 1.2E-36 282.2 16.0 280 70-465 87-430 (431)
24 4ewg_A Beta-ketoacyl synthase; 100.0 1.5E-31 5.2E-36 275.9 20.6 272 70-466 76-411 (412)
25 3mqd_A Beta-ketoacyl synthase; 100.0 3.1E-31 1E-35 274.7 21.4 276 70-467 91-427 (428)
26 1tqy_B Actinorhodin polyketide 100.0 5.7E-31 1.9E-35 271.9 23.2 272 70-467 78-412 (415)
27 2iwz_A 3-oxoacyl-[acyl-carrier 100.0 2.8E-31 9.7E-36 275.7 20.8 276 70-466 96-438 (438)
28 1ox0_A Beta ketoacyl-acyl carr 100.0 6.1E-31 2.1E-35 272.7 21.5 274 70-467 92-428 (430)
29 2gp6_A 3-oxoacyl-[acyl-carrier 100.0 2.2E-30 7.5E-35 268.5 24.1 271 71-465 99-433 (434)
30 1tqy_A Beta-ketoacyl synthase/ 100.0 5.9E-31 2E-35 272.5 19.0 276 71-467 73-418 (424)
31 2vba_A 3-oxoacyl-[acyl-carrier 100.0 3.2E-30 1.1E-34 265.4 18.5 271 70-468 70-406 (406)
32 1zow_A 3-oxoacyl-[acyl-carrier 100.0 5.1E-30 1.7E-34 254.8 16.2 290 23-465 3-311 (313)
33 2qo3_A Eryaii erythromycin pol 100.0 7.7E-29 2.6E-33 277.4 23.1 278 70-468 94-433 (915)
34 2ebd_A 3-oxoacyl-[acyl-carrier 100.0 2.1E-29 7.2E-34 249.8 15.8 284 23-464 3-308 (309)
35 2hg4_A DEBS, 6-deoxyerythronol 100.0 1.1E-28 3.8E-33 276.2 23.4 277 71-468 116-455 (917)
36 1ub7_A 3-oxoacyl-[acyl-carrier 100.0 3.1E-29 1E-33 250.2 14.9 288 24-465 3-319 (322)
37 1u6e_A 3-oxoacyl-[acyl-carrier 100.0 3.2E-29 1.1E-33 251.3 14.7 293 20-465 10-332 (335)
38 3hhd_A Fatty acid synthase; tr 99.9 1.4E-27 4.9E-32 268.2 18.0 270 71-468 80-411 (965)
39 1mzj_A Beta-ketoacylsynthase I 99.9 2.2E-27 7.6E-32 238.5 14.3 291 21-465 10-331 (339)
40 4dfe_A 3-oxoacyl-[acyl-carrier 99.9 5.2E-27 1.8E-31 235.3 16.0 286 22-464 11-332 (333)
41 1hnj_A Beta-ketoacyl-acyl carr 99.9 2.5E-27 8.5E-32 235.8 13.6 288 23-464 3-316 (317)
42 2x3e_A 3-oxoacyl-[acyl-carrier 99.9 5E-27 1.7E-31 235.2 13.5 290 22-470 5-327 (331)
43 3il3_A 3-oxoacyl-[acyl-carrier 99.9 2.5E-26 8.4E-31 229.3 17.9 286 21-464 8-322 (323)
44 3s21_A 3-oxoacyl-[ACP] synthas 99.9 1.3E-26 4.4E-31 233.5 14.0 307 20-464 10-344 (345)
45 3zen_D Fatty acid synthase; tr 99.9 9E-26 3.1E-30 273.3 17.6 288 70-468 2646-3013(3089)
46 4ewp_A 3-oxoacyl-[acyl-carrier 99.9 2.5E-25 8.5E-30 224.5 18.1 141 21-164 12-154 (350)
47 3h78_A PQS biosynthetic enzyme 99.9 1.4E-25 4.7E-30 226.9 15.1 294 21-470 24-356 (359)
48 3gwa_A 3-oxoacyl-(acyl-carrier 99.9 2E-25 7E-30 226.3 16.4 145 19-165 27-174 (365)
49 4efi_A 3-oxoacyl-(acyl-carrier 99.9 5.6E-25 1.9E-29 222.2 19.6 294 20-466 14-344 (354)
50 1u0m_A Putative polyketide syn 99.9 1.5E-26 5E-31 236.3 7.1 294 23-466 10-355 (382)
51 1ted_A PKS18; thiolase fold, s 99.9 4.2E-26 1.4E-30 233.8 9.1 302 21-466 31-391 (393)
52 2h84_A Steely1; thiolase-fold, 99.9 6.1E-26 2.1E-30 231.0 9.8 295 22-465 13-372 (374)
53 2uv8_A Fatty acid synthase sub 99.9 1.5E-24 5.1E-29 251.5 17.5 287 71-467 1211-1659(1887)
54 2pff_A Fatty acid synthase sub 99.9 2.3E-25 8E-30 250.3 9.5 288 71-468 1012-1461(1688)
55 2uv9_A Fatty acid synthase alp 99.9 2.5E-24 8.6E-29 249.1 17.2 287 71-467 1186-1640(1878)
56 3led_A 3-oxoacyl-acyl carrier 99.9 4.3E-24 1.5E-28 218.2 12.9 144 18-165 20-209 (392)
57 3s3l_A CERJ; acyltransferase, 99.9 9E-24 3.1E-28 213.5 15.1 140 20-164 3-149 (357)
58 3il6_A 3-oxoacyl-[acyl-carrier 99.9 3.1E-23 1.1E-27 206.7 15.3 141 21-165 3-145 (321)
59 2d3m_A Pentaketide chromone sy 99.9 2.1E-23 7E-28 214.6 13.5 302 21-468 28-405 (406)
60 3tsy_A Fusion protein 4-coumar 99.9 1.2E-23 4E-28 239.2 11.4 308 21-469 602-977 (979)
61 2p0u_A Stilbenecarboxylate syn 99.9 2.1E-22 7.1E-27 207.4 12.1 307 19-471 31-410 (413)
62 1ee0_A 2-pyrone synthase; poly 99.9 2.5E-22 8.6E-27 206.2 12.5 303 21-470 20-396 (402)
63 3a5r_A Benzalacetone synthase; 99.9 1.8E-22 6.3E-27 206.2 11.2 300 22-468 12-385 (387)
64 2vz8_A Fatty acid synthase; tr 99.9 6.4E-22 2.2E-26 240.6 17.7 269 72-468 79-409 (2512)
65 1i88_A CHS2, chalcone synthase 99.9 3.4E-22 1.2E-26 204.4 12.7 301 21-467 15-388 (389)
66 1xpm_A 3-hydroxy-3-methylgluta 99.9 1.7E-22 5.9E-27 206.9 10.4 294 22-468 2-321 (396)
67 3ov2_A Curcumin synthase; type 99.9 9.1E-22 3.1E-26 201.2 14.6 304 21-468 15-389 (393)
68 3oit_A OS07G0271500 protein; t 99.9 2.9E-22 9.9E-27 204.5 10.2 141 21-164 9-189 (387)
69 1xes_A Dihydropinosylvin synth 99.9 4.5E-22 1.5E-26 204.9 11.4 300 21-467 37-411 (413)
70 3awk_A Chalcone synthase-like 99.9 8.7E-22 3E-26 202.1 12.7 300 21-466 28-400 (402)
71 3e1h_A PKSIIINC, putative unch 99.8 2E-20 7E-25 194.2 15.7 142 21-165 30-208 (465)
72 3v4n_A HMG-COA synthase; hydro 99.8 2.9E-21 9.8E-26 196.9 9.1 140 22-165 7-148 (388)
73 3euo_A Type III pentaketide sy 99.8 1E-20 3.5E-25 192.5 12.3 141 22-165 2-179 (379)
74 2f82_A HMG-COA synthase; HMGS1 99.8 5.7E-20 2E-24 191.1 16.1 139 22-164 3-149 (450)
75 3sqz_A Putative hydroxymethylg 99.8 5E-21 1.7E-25 196.7 7.9 140 22-165 36-177 (425)
76 2v4w_A Hydroxymethylglutaryl-C 99.8 4.8E-20 1.6E-24 190.1 14.7 142 21-164 4-151 (460)
77 2p8u_A Hydroxymethylglutaryl-C 99.8 2.9E-18 9.8E-23 179.1 15.2 139 21-162 23-168 (478)
78 3v7i_A Putative polyketide syn 99.8 5.6E-19 1.9E-23 181.0 9.6 114 48-165 117-231 (413)
79 3lma_A Stage V sporulation pro 99.7 1.3E-17 4.5E-22 164.3 15.9 102 56-167 43-144 (347)
80 2wya_A Hydroxymethylglutaryl-C 99.7 2.3E-17 8E-22 171.9 12.4 138 21-160 4-145 (460)
81 3lma_A Stage V sporulation pro 87.8 0.92 3.2E-05 44.5 6.8 88 74-163 208-310 (347)
82 2v4w_A Hydroxymethylglutaryl-C 85.7 0.96 3.3E-05 46.3 5.9 61 313-373 19-82 (460)
83 4efi_A 3-oxoacyl-(acyl-carrier 84.9 3 0.0001 41.0 9.0 40 349-388 70-114 (354)
84 3s21_A 3-oxoacyl-[ACP] synthas 84.2 2.6 8.9E-05 41.2 8.2 82 74-162 247-334 (345)
85 1zow_A 3-oxoacyl-[acyl-carrier 83.6 2.7 9.1E-05 40.2 7.9 81 74-162 213-300 (313)
86 1u6e_A 3-oxoacyl-[acyl-carrier 83.4 3 0.0001 40.2 8.2 85 73-162 232-321 (335)
87 2x3e_A 3-oxoacyl-[acyl-carrier 82.9 2.7 9.2E-05 40.7 7.6 82 73-162 224-312 (331)
88 3h78_A PQS biosynthetic enzyme 82.8 2.3 7.9E-05 41.9 7.2 83 73-162 254-340 (359)
89 1hnj_A Beta-ketoacyl-acyl carr 82.8 3.9 0.00013 39.1 8.7 80 74-162 219-306 (317)
90 3il6_A 3-oxoacyl-[acyl-carrier 82.6 3.6 0.00012 39.7 8.4 26 349-374 56-81 (321)
91 4dfe_A 3-oxoacyl-[acyl-carrier 82.2 4.3 0.00015 39.3 8.8 82 73-162 234-322 (333)
92 2ebd_A 3-oxoacyl-[acyl-carrier 81.3 4.6 0.00016 38.4 8.5 81 74-162 211-298 (309)
93 1mzj_A Beta-ketoacylsynthase I 81.2 3.7 0.00012 39.8 7.9 85 73-162 231-320 (339)
94 3gwa_A 3-oxoacyl-(acyl-carrier 79.3 4.5 0.00016 39.8 7.9 82 73-162 266-354 (365)
95 1ub7_A 3-oxoacyl-[acyl-carrier 79.0 6.6 0.00023 37.5 8.9 81 73-162 220-308 (322)
96 3il3_A 3-oxoacyl-[acyl-carrier 78.5 5.5 0.00019 38.4 8.1 82 73-162 224-312 (323)
97 2p8u_A Hydroxymethylglutaryl-C 76.3 3.4 0.00011 42.5 6.1 63 313-375 38-103 (478)
98 2iik_A 3-ketoacyl-COA thiolase 74.1 10 0.00034 38.1 8.9 113 314-449 15-141 (418)
99 3tsy_A Fusion protein 4-coumar 73.2 8 0.00027 43.2 8.7 84 74-162 865-962 (979)
100 4ewp_A 3-oxoacyl-[acyl-carrier 73.2 10 0.00035 36.7 8.6 81 74-161 250-337 (350)
101 2wya_A Hydroxymethylglutaryl-C 72.2 7.1 0.00024 39.7 7.3 60 313-373 19-82 (460)
102 1ee0_A 2-pyrone synthase; poly 71.9 12 0.00043 37.1 8.9 39 350-388 112-154 (402)
103 3v7i_A Putative polyketide syn 71.4 11 0.00036 37.9 8.2 39 350-388 142-184 (413)
104 1ted_A PKS18; thiolase fold, s 70.3 9.6 0.00033 37.8 7.7 85 73-162 287-379 (393)
105 3euo_A Type III pentaketide sy 68.5 13 0.00044 36.8 8.1 39 350-388 86-128 (379)
106 4dd5_A Acetyl-COA acetyltransf 68.4 23 0.0008 35.0 10.0 98 329-449 9-117 (396)
107 3ov2_A Curcumin synthase; type 67.2 15 0.00052 36.4 8.4 39 350-388 107-149 (393)
108 4e1l_A Acetoacetyl-COA thiolas 66.7 9.2 0.00031 37.9 6.6 76 76-158 297-380 (395)
109 3ss6_A Acetyl-COA acetyltransf 65.5 8 0.00027 38.4 5.9 75 76-157 295-377 (394)
110 3s3l_A CERJ; acyltransferase, 65.5 7 0.00024 38.3 5.4 83 73-162 238-327 (357)
111 3led_A 3-oxoacyl-acyl carrier 64.8 9.1 0.00031 38.1 6.1 83 73-162 291-380 (392)
112 3e1h_A PKSIIINC, putative unch 64.6 16 0.00055 37.2 8.1 39 350-388 115-157 (465)
113 2f82_A HMG-COA synthase; HMGS1 62.4 14 0.00048 37.4 7.1 25 349-373 56-80 (450)
114 4egv_A Acetyl-COA acetyltransf 61.2 26 0.00088 36.2 8.9 82 74-160 318-408 (520)
115 3svk_A Acetyl-COA acetyltransf 60.9 13 0.00046 37.0 6.6 75 76-157 308-390 (407)
116 2gel_A Putative GRAM negative 58.4 7.2 0.00025 35.8 3.8 31 70-100 33-63 (231)
117 2ib8_A Acetyl-COA acetyltransf 58.0 10 0.00035 37.6 5.1 72 75-155 297-378 (395)
118 1u0m_A Putative polyketide syn 57.5 8.1 0.00028 38.1 4.2 77 78-162 257-343 (382)
119 2d3m_A Pentaketide chromone sy 56.7 27 0.00091 34.7 8.0 83 74-162 291-391 (406)
120 2h84_A Steely1; thiolase-fold, 54.7 13 0.00044 36.4 5.2 81 73-162 267-361 (374)
121 3r6m_A YEAZ, resuscitation pro 54.6 7.6 0.00026 35.2 3.1 56 71-130 35-94 (213)
122 1wl4_A Acetyl-coenzyme A acety 54.6 15 0.0005 36.5 5.6 76 76-158 298-381 (397)
123 1ulq_A Putative acetyl-COA ace 53.7 34 0.0012 33.8 8.1 76 76-158 299-384 (401)
124 2vu1_A Acetyl-COA acetyltransf 53.6 21 0.00071 35.3 6.5 77 76-157 293-375 (392)
125 3a5r_A Benzalacetone synthase; 53.4 20 0.0007 35.3 6.4 39 350-388 103-145 (387)
126 1i88_A CHS2, chalcone synthase 52.9 20 0.00068 35.4 6.2 39 350-388 107-149 (389)
127 3awk_A Chalcone synthase-like 52.5 18 0.00062 35.9 5.8 39 350-388 120-162 (402)
128 2a6a_A Hypothetical protein TM 51.6 7.1 0.00024 35.6 2.4 31 70-100 44-74 (218)
129 1xes_A Dihydropinosylvin synth 51.0 21 0.00073 35.5 6.2 39 350-388 130-172 (413)
130 2p0u_A Stilbenecarboxylate syn 50.8 22 0.00076 35.4 6.3 39 350-388 125-167 (413)
131 3goa_A 3-ketoacyl-COA thiolase 50.8 25 0.00086 34.6 6.6 77 76-157 285-370 (387)
132 3kzu_A 3-oxoacyl-(acyl-carrier 50.7 14 0.00047 37.2 4.7 73 74-151 294-376 (428)
133 1wdk_C 3-ketoacyl-COA thiolase 47.5 27 0.00094 34.4 6.3 78 76-158 288-374 (390)
134 2wu9_A 3-ketoacyl-COA thiolase 47.4 29 0.001 35.0 6.5 75 76-157 318-402 (442)
135 3oit_A OS07G0271500 protein; t 45.8 26 0.00091 34.5 5.8 39 350-388 101-143 (387)
136 3ho9_A 3-oxoacyl-[acyl-carrier 40.9 14 0.00047 37.1 2.8 77 74-151 293-376 (427)
137 1xpm_A 3-hydroxy-3-methylgluta 39.9 18 0.00061 35.9 3.5 26 74-99 208-233 (396)
138 1j3n_A 3-oxoacyl-(acyl-carrier 36.4 13 0.00045 36.9 1.8 74 74-150 276-358 (408)
139 1afw_A 3-ketoacetyl-COA thiola 35.8 84 0.0029 30.8 7.7 98 329-449 12-125 (393)
140 3nq4_A 6,7-dimethyl-8-ribityll 32.9 1.2E+02 0.0041 25.8 7.0 31 68-98 23-54 (156)
141 4ewg_A Beta-ketoacyl synthase; 32.3 21 0.00072 35.5 2.6 77 72-151 278-360 (412)
142 1tqy_B Actinorhodin polyketide 30.5 37 0.0013 33.7 4.1 76 74-151 280-361 (415)
143 3ven_A O-carbamoyltransferase 30.5 20 0.00068 37.5 2.1 28 348-375 51-78 (576)
144 4ddo_A 3-oxoacyl-[acyl-carrier 30.4 26 0.00088 35.4 2.9 77 74-151 309-391 (451)
145 1tqy_A Beta-ketoacyl synthase/ 29.2 31 0.0011 34.3 3.3 76 74-150 284-366 (424)
146 3v4n_A HMG-COA synthase; hydro 28.5 89 0.003 30.7 6.4 89 71-162 210-313 (388)
147 1ox0_A Beta ketoacyl-acyl carr 28.5 35 0.0012 34.1 3.5 76 74-151 297-377 (430)
148 3eno_A Putative O-sialoglycopr 27.0 24 0.00082 34.2 1.8 29 72-100 53-81 (334)
149 2obx_A DMRL synthase 1, 6,7-di 24.4 93 0.0032 26.5 4.9 31 68-98 22-52 (157)
150 2w6k_A COBE; biosynthetic prot 23.0 1.4E+02 0.0048 25.0 5.7 49 68-121 21-70 (145)
151 2ivn_A O-sialoglycoprotein end 22.9 74 0.0025 30.4 4.5 28 73-100 49-76 (330)
152 1rvv_A Riboflavin synthase; tr 22.4 2E+02 0.0068 24.3 6.5 31 68-98 23-53 (154)
153 2qo3_A Eryaii erythromycin pol 21.5 1.1E+02 0.0037 34.0 6.0 79 72-151 285-373 (915)
154 1kz1_A 6,7-dimethyl-8-ribityll 21.0 1.6E+02 0.0055 25.1 5.7 30 68-97 28-58 (159)
155 1hqk_A 6,7-dimethyl-8-ribityll 20.2 2E+02 0.0068 24.4 6.1 31 68-98 23-53 (154)
156 3o04_A LMO2201 protein, beta-k 20.0 58 0.002 32.2 3.2 26 73-98 277-302 (413)
No 1
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-65 Score=525.48 Aligned_cols=377 Identities=36% Similarity=0.563 Sum_probs=333.3
Q ss_pred CCceEEEecccccccccC-ccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~-~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
|++++|||++||||+++. +.+.++++.+|+.+|+++||+|+ |+++++||.+++|+..+++. .+++++.++..+|++.
T Consensus 1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~ 80 (387)
T 3goa_A 1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH 80 (387)
T ss_dssp CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence 568999999999999986 67778999999999999999999 99999999999999888765 6789999999999976
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
.+|+++|+++|+|++++|++|++.|++|++|++||+|+|+||+.|+.... + ++++
T Consensus 81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~---------------~-----~~~~----- 135 (387)
T 3goa_A 81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGV---------------D-----FHPG----- 135 (387)
T ss_dssp TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTB---------------C-----CCTT-----
T ss_pred CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCcccccc---------------C-----cCcc-----
Confidence 79999999999999999999999999999999999999999988764110 0 0010
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-----ceeeccCCCc
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-----KTISKDNGVR 276 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-----~~~~~de~~~ 276 (472)
....+++. ...|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ +++|+.... ..++.|+.+|
T Consensus 136 ---~~~~~~~~-~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r 211 (387)
T 3goa_A 136 ---LSRNVAKA-AGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIR 211 (387)
T ss_dssp ---CC--------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCC
T ss_pred ---cccccccc-cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccC
Confidence 01111222 3679999999999999999999999999999999999999887 588986621 3578899998
Q ss_pred c-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHH
Q psy1213 277 V-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQ 355 (472)
Q Consensus 277 ~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~ 355 (472)
+ +|+|+|++++|+|..++|++|.+|||+++||++++||++++.|++++.+|+++|+|++...++|.. +..++..++++
T Consensus 212 ~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~~~-~~~~~~~a~~~ 290 (387)
T 3goa_A 212 PETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSI-MGYGPVPASKL 290 (387)
T ss_dssp TTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCTTS-TTCTHHHHHHH
T ss_pred CCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCCCc-chHHHHHHHHH
Confidence 6 999999999999942288999999999999999999999999999999999999999998877654 56788999999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+|++||++++|||++|+||+|+++++..++.|| ||+++. .| +|++||++++|||+||||+++++++
T Consensus 291 al~~agl~~~did~ve~h~~f~~~~~~~~~~lg---~~~~~~--------~~---vn~~gg~~~~GH~~gasG~~~~~~~ 356 (387)
T 3goa_A 291 ALKKAGLSASDIDVFEMNEAFAAQILPCIKDLG---LMEQID--------EK---INLNGGAIALGHPLGCSGARISTTL 356 (387)
T ss_dssp HHHHHTCCGGGCSEEEECCSBHHHHHHHHHHTT---CGGGHH--------HH---BSTTCCHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHcCEEEEeCcchHHHHHHHHHhC---CCcCCC--------cc---CCCCCchhcccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 888653 35 9999999999999999999999999
Q ss_pred HHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 436 ANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 436 v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++||+++.+++||++.|++||+|.++|||+.
T Consensus 357 ~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 357 INLMERKDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp HHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHhcCCCEEEEEeccCcCceEEEEEEeC
Confidence 9999999999999999999999999999974
No 2
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=4.7e-65 Score=524.49 Aligned_cols=391 Identities=32% Similarity=0.499 Sum_probs=329.6
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCCCC
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSDKT 124 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~~~ 124 (472)
|++++|||++||||+++++.++++++.+|+.+|+++||+|+|+++++||.|++|+..+++. .++++..++..+|++..+
T Consensus 1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~ 80 (401)
T 1ulq_A 1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV 80 (401)
T ss_dssp --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence 3579999999999999877778899999999999999999999999999999999887764 578999999999996568
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+..... + +.. . .+. ....+... . +
T Consensus 81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~-~-----~~~-~-~~~-~~~~~~~~-~-~-- 147 (401)
T 1ulq_A 81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKP-E-----RGF-P-TGN-LVMYDTTL-G-W-- 147 (401)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCC-C-----SSS-C-CSC-EEEEETTS-S-C--
T ss_pred cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccc-c-----ccc-c-cCc-ccccchhh-h-c--
Confidence 9999999999999999999999999999999999999999877632100 0 000 0 000 00000000 0 0
Q ss_pred Ccc-ccc-ccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-c---ceeeccCCCcc
Q psy1213 205 ELP-AVA-EFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-D---KTISKDNGVRV 277 (472)
Q Consensus 205 ~~~-~~~-~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~---~~~~~de~~~~ 277 (472)
+.+ .+. +......|++.+++|+++||+|||++++|++++|++|..+++.|+|+ ++.|+... + ..++.|+.+|+
T Consensus 148 ~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~ 227 (401)
T 1ulq_A 148 RFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRR 227 (401)
T ss_dssp CSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCT
T ss_pred cccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCC
Confidence 000 000 11113458999999999999999999999999999999999999987 47887541 1 23778999986
Q ss_pred -CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHH
Q psy1213 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQV 356 (472)
Q Consensus 278 -~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~A 356 (472)
+|+|+|+++||+|. ++|++|++|||+++|||+++||+|++.|++++.+|+++|+|++..+++|.. +..++..++++|
T Consensus 228 ~~t~e~~~~~rpif~-~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~a 305 (401)
T 1ulq_A 228 DTSLEKLAALRPVFR-EGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPPRI-MGIGPVPATRKA 305 (401)
T ss_dssp TCCHHHHHHSCBSSS-TTCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHH
T ss_pred CCCHHHHhhCCCccC-CCCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCccc-cchhHHHHHHHH
Confidence 89999999999984 478999999999999999999999999999999999999999998877653 567889999999
Q ss_pred HHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
|++||++++|||++|+||+|+++++..+|+|| ||+++ .| +|++||++++|||+||||++++++++
T Consensus 306 l~~Agl~~~dId~ie~heafa~~~l~~~~~lg---~~~~~---------~~---vn~~Gg~~a~GHp~gAsG~~~~~~~~ 370 (401)
T 1ulq_A 306 LERAGLSFSDLGLIELNEAFAAQALAVLREWS---LSMED---------QR---LNPNGGAIALGHPLGASGARILTTLV 370 (401)
T ss_dssp HHHTTCCGGGCSEEEECCSBHHHHHHHHHHHT---CCTTC---------TT---BSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHcCEEEEecchHHHHHHHHHHcC---CCCCC---------Cc---cCCCCcccccCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999 77642 24 99999999999999999999999999
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+|||++..+++|+++|++||++.++||++.
T Consensus 371 ~~L~~~~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 371 HEMRRRKVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp HHHHHTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHhhcCCCEEEEEeecCCcccEEEEEEeC
Confidence 999999999999999999999999999984
No 3
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=100.00 E-value=2.5e-65 Score=524.64 Aligned_cols=382 Identities=29% Similarity=0.438 Sum_probs=328.3
Q ss_pred cccccccCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcC----CCcCccCEEEEEeecCCCCCChHHHH
Q psy1213 39 KSVKDKTGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTG----ISKDLIDYIVYGTVIQEVKTSNIGRE 113 (472)
Q Consensus 39 ~~~~~~~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~ag----i~~~~Id~vi~g~~~~~~~~~~~a~~ 113 (472)
|..+.++|+++|||+++||||+++ ++.++++++.+|+.+|+++||+|+| +++++||.+++|+..+++..++++..
T Consensus 2 ~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~ 81 (393)
T 1afw_A 2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA 81 (393)
T ss_dssp TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred cchhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHH
Confidence 667888899999999999999997 4777789999999999999999999 99999999999998876656778999
Q ss_pred HHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhh
Q psy1213 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKL 193 (472)
Q Consensus 114 ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (472)
++..+|++..+|+++|+++|+|++++|.+|+++|++|++|++||+|+|.++..|+..... + . ...
T Consensus 82 va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~-------~-~--~~~----- 146 (393)
T 1afw_A 82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPL-------G-M--ISS----- 146 (393)
T ss_dssp HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTT-------C-S--CCC-----
T ss_pred HHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCccccccc-------c-c--ccc-----
Confidence 999999965789999999999999999999999999999999999999987655421100 0 0 000
Q ss_pred hhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec-cceeec
Q psy1213 194 LATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG-DKTISK 271 (472)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~-~~~~~~ 271 (472)
+.+....+ .+.....|++++++|+++||+|||++++|++++|++|.+++++|+|+ |+.|+... ++.++.
T Consensus 147 -~~~~~~g~--------~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~ 217 (393)
T 1afw_A 147 -EELQKNRE--------AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQS 217 (393)
T ss_dssp -HHHHHCTT--------GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECS
T ss_pred -hhhhhccc--------ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceecc
Confidence 00000000 01112468999999999999999999999999999999999999996 58898641 124677
Q ss_pred cCCCcc-CCHHHHhcCCCcccCCC-CceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccH
Q psy1213 272 DNGVRV-STPEQMAKLKPAFVKPH-GSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGP 349 (472)
Q Consensus 272 de~~~~-~t~~~~~~~~p~~~~~~-g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~ 349 (472)
|+.+|. +|+|+|+++||+|. ++ |++|.+|||+++|||+++||+|++.|++++.+|+++|+|++..+++|.. +..++
T Consensus 218 d~~~r~~~t~e~~~~~rpvf~-~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~ 295 (393)
T 1afw_A 218 DEGPRPNVTAESLSSIRPAFI-KDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEI-MGVGP 295 (393)
T ss_dssp CSSCCSCCCHHHHHHCCBSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGG-GGGHH
T ss_pred ccccCCCCCHHHHhcCCCccc-CCCCCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccChhh-cchhH
Confidence 888774 89999999999983 34 8999999999999999999999999999999999999999998877653 56678
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHH
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGV 429 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~ 429 (472)
..++++||++||++++|||++|+||+|+++++..++.|| ||+ .++|++||++++|||+||||+
T Consensus 296 ~~a~~~al~~Agl~~~dId~ve~h~~ft~~~l~~~~~lg---~~~--------------~~vn~~Gg~~a~GHp~gAsG~ 358 (393)
T 1afw_A 296 AYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLG---IDL--------------NKVNPRGGAIALGHPLGCTGA 358 (393)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHT---CCG--------------GGBSTTCCHHHHCBCTTTHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeccCHHHHHHHHHHhC---CCC--------------cCcCCCCChhhcCCchhhHHH
Confidence 999999999999999999999999999999999999999 433 359999999999999999999
Q ss_pred HHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 430 RLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 430 ~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++++++|||++.+ ||+++|++||++.+++||+
T Consensus 359 ~~~~~~~~~L~~~~~--gl~~~c~ggg~g~a~~~~~ 392 (393)
T 1afw_A 359 RQVATILRELKKDQI--GVVSMCIGTGMGAAAIFIK 392 (393)
T ss_dssp HHHHHHHHHSCTTCE--EEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHhhcCC--cEEEEeecccceEEEEEEe
Confidence 999999999998876 9999999999999999997
No 4
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=100.00 E-value=1.6e-64 Score=519.51 Aligned_cols=385 Identities=32% Similarity=0.518 Sum_probs=334.6
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|+++|||+++||||+++++.++++++.+|+.+|+++||+++|+++++||.+++++..+++..+++++.++..+|++..+|
T Consensus 6 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p 85 (396)
T 4dd5_A 6 MREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP 85 (396)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce
Confidence 67999999999999998777788999999999999999999999999999999999888778899999999999976799
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+|++++|++|+++|++|.+|++||+|+|++|+.|+...... +.. ..+. ....+.+.
T Consensus 86 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~------~~~--~~~~-~~~~~~~~------- 149 (396)
T 4dd5_A 86 AMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSAR------YGA--RMGD-AAFVDSMI------- 149 (396)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTT------TCC--CSSC-CCCEEHHH-------
T ss_pred EEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccc------ccc--ccCc-ccccchhh-------
Confidence 9999999999999999999999999999999999999999876532110 000 0000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----ceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----KTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----~~~~~de~~~~-~t 279 (472)
.+.+.++.....|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ |+.|+.... ..++.|+.+|+ +|
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t 229 (396)
T 4dd5_A 150 KDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTT 229 (396)
T ss_dssp HHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCC
T ss_pred hcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCC
Confidence 0111233334679999999999999999999999999999999999999997 589987622 14778898886 99
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|++++|+| +|+|++|.+|||+++|||+++||++++.|++++.+|+++|+|++...+.|.. +..++..+++++|++
T Consensus 230 ~e~l~~~~~v~-~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~~ 307 (396)
T 4dd5_A 230 MEKLAKLRPAF-KKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGVDPKI-MGYGPVPATKKALEA 307 (396)
T ss_dssp HHHHHHCCBSS-STTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHH
T ss_pred HHHHhhCCCcc-CCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecCCCCc-ccHHHHHHHHHHHHH
Confidence 99999999999 5789999999999999999999999999999999999999999998776653 566789999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++++|||++|+||+|++..+..+|.|| || ..++|++||++++|||+||+|+++++++++||
T Consensus 308 Agl~~~dId~ve~~d~f~~~~~~~~~~lg---~~--------------~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L 370 (396)
T 4dd5_A 308 ANMTIEDIDLVEANEAFAAQSVAVIRDLN---ID--------------MNKVNVNGGAIAIGHPIGCSGARILTTLLYEM 370 (396)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHT---CC--------------TTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHcCEEEecChHHHHHHHHHHHhC---CC--------------CCccCCCCchhhccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 43 33499999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEe
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++.+++||+++|++||+|.++|||+
T Consensus 371 ~~~~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 371 KRRDAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp HHHTCSEEEEEEEETTTEEEEEEEEC
T ss_pred HhcCCCeEEEEEcccCCceeEEEEeC
Confidence 99999999999999999999999986
No 5
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=100.00 E-value=7e-65 Score=527.15 Aligned_cols=381 Identities=33% Similarity=0.499 Sum_probs=328.0
Q ss_pred cccccCCceEEEecccccccccC-ccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHc
Q psy1213 41 VKDKTGKNIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSA 118 (472)
Q Consensus 41 ~~~~~~~~~~Ivg~~~t~~~~~~-~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~l 118 (472)
..++.|+++|||+++||||+++. +.+.++++.+|+.+|+++||+++|+++++||.+++|+..+++. .++++..++..+
T Consensus 24 ~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~l 103 (442)
T 2wu9_A 24 RTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYA 103 (442)
T ss_dssp --CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHT
T ss_pred cchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHc
Confidence 33455678999999999999975 6677899999999999999999999999999999998776432 356788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|++..+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+..... ... .+
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~------------~~~-------~~- 163 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGS------------VNP-------AV- 163 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSC------------CCG-------GG-
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccc------------cch-------hh-
Confidence 9965789999999999999999999999999999999999999998876531100 000 00
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----------cc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----------DK 267 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----------~~ 267 (472)
+ ... .++.....|++.+++|+++||+|||++++|++++|++|..+++.|+|+ ++.|+... ..
T Consensus 164 ---~---~~~-~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~ 236 (442)
T 2wu9_A 164 ---K---KFA-QAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPI 236 (442)
T ss_dssp ---G---GCH-HHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEE
T ss_pred ---h---hcc-ccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCce
Confidence 0 000 011223578999999999999999999999999999999999999887 47887641 12
Q ss_pred eeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccccc
Q psy1213 268 TISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLL 346 (472)
Q Consensus 268 ~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~ 346 (472)
.++.||.+|+ +|+|+|+++||+|. ++|++|.+|||+++|||+++||+|++.|++++.+|+++|+|++...++|.. +.
T Consensus 237 ~~~~De~~r~~~t~e~~~~~rpvfd-~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-~~ 314 (442)
T 2wu9_A 237 TVSVDDGIRPTTTLASLGKLKPVFK-KDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAI-MG 314 (442)
T ss_dssp EECSCTTCCTTCCHHHHHTSCCSSC-TTCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCGGG-GG
T ss_pred eeecccCcCCCCCHHHHhcCCCccC-CCCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCCchh-cc
Confidence 4788999985 99999999999984 578999999999999999999999999999999999999999998876653 56
Q ss_pred ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCC
Q psy1213 347 LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAA 426 (472)
Q Consensus 347 ~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~ga 426 (472)
.++..++++||++||++++|||+||+||+|+++++..++.|| || .++||++||++++|||+||
T Consensus 315 ~~~~~A~~~Al~~AGl~~~DId~iE~h~aft~~~l~~~~~lG---~~--------------~~~vN~~GG~~a~GHp~GA 377 (442)
T 2wu9_A 315 IGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLG---LD--------------PEKINVNGGAMAIGHPLGA 377 (442)
T ss_dssp GHHHHHHHHHHHHTTCCGGGCCEEEECCSBHHHHHHHHHHHT---CC--------------GGGBSTTCCHHHHCCCHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHCCEEEEeCCChHHHHHHHHHhC---CC--------------CCCcCCCccHhhcCCchhH
Confidence 678899999999999999999999999999999999999999 43 3359999999999999999
Q ss_pred cHHHHHHHHHHHHhhcc--CCcchhhhhccCcceeEEEEEeCC
Q psy1213 427 TGVRLTVHAANRLVRED--GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 427 sG~~~v~e~v~qL~~~~--g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
||+++++++++|||++. .+++|+++|++||+++++||++.+
T Consensus 378 sG~~~~~~~v~~Lr~~~~~~~~glas~~~GGG~~~a~v~~~~~ 420 (442)
T 2wu9_A 378 TGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGD 420 (442)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEEEETTTEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEEeecccchheEEEEEecc
Confidence 99999999999999998 899999889999999999999864
No 6
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=100.00 E-value=1.8e-64 Score=522.09 Aligned_cols=389 Identities=31% Similarity=0.492 Sum_probs=321.9
Q ss_pred cCCCCccccccccc-----CCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCC
Q psy1213 32 HNVYSPRKSVKDKT-----GKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105 (472)
Q Consensus 32 ~p~~~~~~~~~~~~-----~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~ 105 (472)
-|++.++|+++++. ++++|||++++|||+++ ++.++++++.+|+.+|+++||+|+|+++++||.|++|+..+++
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~ 89 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPG 89 (418)
T ss_dssp -----------------CCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBG
T ss_pred CCCccccHHHHHHHhhhccCCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCcc
Confidence 36677777666643 45899999999999985 3456789999999999999999999999999999999888766
Q ss_pred CCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCC
Q psy1213 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAK 185 (472)
Q Consensus 106 ~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~ 185 (472)
..+++++.++..+|++..+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++..|+.... +
T Consensus 90 ~~~~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~----------~-- 157 (418)
T 2iik_A 90 AGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPG----------N-- 157 (418)
T ss_dssp GGHHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC---------------C--
T ss_pred ccccHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCc----------c--
Confidence 5567888899999996579999999999999999999999999999999999999999987653100 0
Q ss_pred CchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCcccee
Q psy1213 186 TPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV 264 (472)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~ 264 (472)
. .+. .+.+ +...++ ...|++.+++++++||+|||++++|++++|++|..+++.|+|+ ++.|...
T Consensus 158 ~-------~~~----~~~~--~~~~~~--~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~ 222 (418)
T 2iik_A 158 I-------TSR----LMEK--EKARDC--LIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTT 222 (418)
T ss_dssp C-------CTT----GGGC--HHHHGG--GSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEE
T ss_pred c-------chh----hhcc--cccccc--cccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeee
Confidence 0 000 0000 000111 1458899999999999999999999999999999999888886 4777653
Q ss_pred c---c------ceeeccCCCcc-CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEe
Q psy1213 265 G---D------KTISKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334 (472)
Q Consensus 265 ~---~------~~~~~de~~~~-~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~ 334 (472)
. + ..++.|+.+|+ +|+|+|++++|+|. +++|+|.+||++++|||+++||+|++.|++++.+|+++|.|+
T Consensus 223 ~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd-~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~ 301 (418)
T 2iik_A 223 TVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFK-KDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSY 301 (418)
T ss_dssp EEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSS-TTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEE
T ss_pred ccccccCcccceeeecccCcCCCCCHHHHhhCCCccc-CCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEE
Confidence 1 1 13677888887 89999999999994 457999999999999999999999999999999999999999
Q ss_pred EEeccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC
Q psy1213 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW 414 (472)
Q Consensus 335 ~~~~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~ 414 (472)
+....+|.. +..++..++++||++||++++|||++|+||+|++++++++++|| || ..+||++
T Consensus 302 ~~~~~~p~~-~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~~~~~~~~~~lg---~~--------------~~~vN~~ 363 (418)
T 2iik_A 302 AVVGVPPDI-MGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLR---LP--------------PEKVNPL 363 (418)
T ss_dssp EEEECCGGG-GGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBHHHHHHHHHHHT---CC--------------GGGBCTT
T ss_pred EeccCCchh-cchhHHHHHHHHHHHcCCCHHHCCeeeeeccchHHHHHHHHHcC---CC--------------ccccCCC
Confidence 988766653 56678889999999999999999999999999999999999999 43 3349999
Q ss_pred CCCccccCCCCCcHHHHHHHHHHHHhhccCC-cchhhhhccCcceeEEEEEeC
Q psy1213 415 GGSLSIGHPFAATGVRLTVHAANRLVREDGQ-FGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 415 GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~-~gl~~~~~~GG~~~a~~l~~~ 466 (472)
||++++|||+||||+++++++++||++++++ +||+++|++||+|.++|||+.
T Consensus 364 GG~~a~GHp~GAsG~~~~~~~~~~L~~~~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 364 GGAVALGHPLGCTGARQVITLLNELKRRGKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp CCHHHHCCCHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred CCeeeecCChhhhHHHHHHHHHHHHHhcCCCeeeEEEEeeccchhheEEEecc
Confidence 9999999999999999999999999999887 999999999999999999985
No 7
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=9.2e-64 Score=513.73 Aligned_cols=386 Identities=38% Similarity=0.549 Sum_probs=334.7
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
.|++++|||++||||+++++.++++++.+|+.+|+++||+|+|+++++||.+++++..+++..+++++.++..+|++..+
T Consensus 3 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~ 82 (394)
T 3ss6_A 3 AMHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTV 82 (394)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTC
T ss_pred CCceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCc
Confidence 36799999999999999877778899999999999999999999999999999999888777788999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++++|++|+++|++|.+|++||+|+|++++.|+..... + +... .+. ....+..
T Consensus 83 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~-~-----~~~~--~~~-~~~~~~~------- 146 (394)
T 3ss6_A 83 TGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQH-R-----WGQR--LQH-GEIRDTV------- 146 (394)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESST-T-----TCCC--SSC-CCCEEHH-------
T ss_pred eEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCccccccc-c-----cccc--cCC-ccccccc-------
Confidence 9999999999999999999999999999999999999999887643210 0 0000 000 0000000
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccc----eeeccCCCcc-C
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDK----TISKDNGVRV-S 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~----~~~~de~~~~-~ 278 (472)
.+.++++.....|++.+++|+++||+|||++++|++++|++|..|+++|+|+ ++.|+....+ .++.|+.+|+ +
T Consensus 147 -~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~ 225 (394)
T 3ss6_A 147 -WEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADI 225 (394)
T ss_dssp -HHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTC
T ss_pred -ccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCC
Confidence 0111233334679999999999999999999999999999999999999997 5899876211 4678888885 9
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
|+|++++++|+| .|+|++|.+|||+++||++++||++++.|++++.+|+++|+|++....+|.. +..++..+++++|+
T Consensus 226 t~e~~~~~~pvf-~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~ 303 (394)
T 3ss6_A 226 TAEKLAGLKPAF-RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGVDPKI-MGIGPAPAIRKGLE 303 (394)
T ss_dssp CHHHHHTCCBSS-STTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHH
T ss_pred CHHHHhhCCCcc-CCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecCCCcc-chHHHHHHHHHHHH
Confidence 999999999998 4689999999999999999999999999999999999999999998766653 56678999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
++|++++|||++|+||+|++..+...+.|| | +.+++|++||++++|||.||||+++++++++|
T Consensus 304 ~agl~~~dId~ve~~d~fa~~~~~~~~~lg---~--------------~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~ 366 (394)
T 3ss6_A 304 KVDWSLEDADLLEINEAFAAQYLAVEKELD---L--------------DREKVNVNGSGVGLGHPIGCTGARITVSLIHE 366 (394)
T ss_dssp HHTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHcCEEEeCCchHHHHHHHHHHhC---C--------------CCCCCCCCcchHhhCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 3 44459999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+++.++++|++.|++||+|.++|||+.
T Consensus 367 L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 367 LKRRGLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp HHHHTCCEEEEEEEETTTEEEEEEEEEC
T ss_pred HHhcCCCEEEEEEccCcCceeEEEEEcC
Confidence 9999999999999999999999999974
No 8
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=100.00 E-value=1.6e-63 Score=511.72 Aligned_cols=385 Identities=34% Similarity=0.524 Sum_probs=330.1
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
|++++|||++||||+++.+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++.+++..+|++..+|
T Consensus 2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 81 (392)
T 2vu1_A 2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT 81 (392)
T ss_dssp CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence 56899999999999998777778999999999999999999999999999999998877666789999999999963489
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++++++|+|++.||++|++.|++|++|++||+|+|+++..|+. .. .+ +.. ..+. ...++...
T Consensus 82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~-~~-~~-----~~~--~~~~-~~~~~~~~------- 144 (392)
T 2vu1_A 82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHC-AH-LR-----GGV--KMGD-FKMIDTMI------- 144 (392)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEE-EC-CT-----TCC--CSSC-EEEEEHHH-------
T ss_pred EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccc-cc-cc-----ccc--ccCc-ccccchhh-------
Confidence 99999999999999999999999999999999999999887752 00 00 000 0000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec----cceeeccCCCcc-CC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG----DKTISKDNGVRV-ST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~----~~~~~~de~~~~-~t 279 (472)
...+.++.....|++++++|+++||+|+|++++|++++|++|.++++.|+|+ ++.|.... .++|+.||.+|+ +|
T Consensus 145 ~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t 224 (392)
T 2vu1_A 145 KDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGAT 224 (392)
T ss_dssp HHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCC
T ss_pred hcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCC
Confidence 0000111123469999999999999999999999999999999999999987 57887652 258999999986 89
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLER 359 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~~ 359 (472)
+|+|++++|+| .++|++|++|||+++|||+++||++++.|++++.+|+++|+|++.....|.. +..++..++++||++
T Consensus 225 ~e~~~~~~~v~-~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~al~~ 302 (392)
T 2vu1_A 225 LDSMAKLRPAF-DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKV-MGTGPIPASRKALER 302 (392)
T ss_dssp HHHHHTCCCSS-CTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHHH
T ss_pred HHHHhcCCCcc-CCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeecChhh-cchhHHHHHHHHHHH
Confidence 99999999998 4679999999999999999999999999999999999999999998776643 567889999999999
Q ss_pred cCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHH
Q psy1213 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 360 Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
+|++++|||+||+||+|+++.+..++.|| | +.+++|++||++++|||+||+|+++++++++||
T Consensus 303 agl~~~dId~ie~~d~f~~~~l~~~~~lg---~--------------~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 365 (392)
T 2vu1_A 303 AGWKIGDLDLVEANEAFAAQACAVNKDLG---W--------------DPSIVNVNGGAIAIGHPIGASGARILNTLLFEM 365 (392)
T ss_dssp HTCCGGGCSEEEECCSBHHHHHHHHHHHC---C--------------CGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHH
T ss_pred cCCCHHHcCEEEeccccHHHHHHHHHHcC---C--------------CcccCCCCccHhhhCCChhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 3 334599999999999999999999999999999
Q ss_pred hhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 440 VREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 440 ~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++.++++|+++|++||++.++|||+.
T Consensus 366 ~~~~~~~gl~~~~~ggG~~~a~~~e~~ 392 (392)
T 2vu1_A 366 KRRGARKGLATLCIGGGMGVAMCIESL 392 (392)
T ss_dssp HHHTCSEEEEEEEETTTEEEEEEEECC
T ss_pred hccCCCEEEEEEecccchheEEEEEeC
Confidence 999999999999999999999999973
No 9
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=100.00 E-value=3.8e-63 Score=509.40 Aligned_cols=386 Identities=33% Similarity=0.524 Sum_probs=333.7
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
+|+++|||+++||||+++++.++++++.+|+.+|+++||+|+|+++++||.++++++.+++..+++++.++..+|++..+
T Consensus 3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~ 82 (395)
T 4e1l_A 3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV 82 (395)
T ss_dssp CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence 47799999999999999877778899999999999999999999999999999999888777789999999999997679
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++++|++|+++|++|.+|++||+|+|++|+.|+..... + +... .+. ....+.+.
T Consensus 83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~-~-----~~~~--~~~-~~~~~~~~------ 147 (395)
T 4e1l_A 83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTA-R-----FGSK--MGN-ITMVDSML------ 147 (395)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHH-H-----HEEE--SCC-C------C------
T ss_pred eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCccccccc-c-----cccc--cCc-cccchhhc------
Confidence 9999999999999999999999999999999999999999876543110 0 0000 000 00011110
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc-c----eeeccCCCcc-
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD-K----TISKDNGVRV- 277 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~-~----~~~~de~~~~- 277 (472)
...+.++.....|++.+++|+++||+|||++++|++++|++|.+|+++|+|+ +++|+.... + .++.|+.+|+
T Consensus 148 -~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~ 226 (395)
T 4e1l_A 148 -TDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLG 226 (395)
T ss_dssp -CTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTT
T ss_pred -ccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCC
Confidence 1111233334579999999999999999999999999999999999999997 589987622 1 4677888885
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVL 357 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al 357 (472)
+|+|++++++|+| .|+|++|.+|||+++||++++||++++.|++++.+|+++|.|++...++|.. +..++..+++++|
T Consensus 227 ~t~e~l~~~~~v~-~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~ai~~al 304 (395)
T 4e1l_A 227 MTFEGLSKLKPAF-KKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGVEPEV-MGTGPIPATRKAL 304 (395)
T ss_dssp CCHHHHHHCCBSS-STTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECCGGG-TTCTHHHHHHHHH
T ss_pred CCHHHHhhCCCcc-CCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccCCCCc-chHHHHHHHHHHH
Confidence 8999999999999 4679999999999999999999999999999999999999999998776653 5667899999999
Q ss_pred HHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAAN 437 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~ 437 (472)
+++|++++|||++|+||+|++..+...+.|| | +..++|++||++++|||.||||+++++++++
T Consensus 305 ~~agl~~~dId~ve~~d~fa~~~~~~~~~lg---~--------------~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~ 367 (395)
T 4e1l_A 305 KKAGLSINDIDLIEANEAFAAQALAVKNELQ---I--------------DSSKLNVNGGAIALGHPIGASGARILVTLIY 367 (395)
T ss_dssp HHTTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCTTTHHHHHHHHHHH
T ss_pred HHcCCCHHHcCEEEecChhHHHHHHHHHHhC---C--------------CCCCCCcCCchhhcCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 3 4445999999999999999999999999999
Q ss_pred HHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 438 RLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 438 qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
||+++.++++|++.|++||+|.++|||+
T Consensus 368 ~L~~~~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 368 EMQKRKVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp HHHHHTCSEEEEEEESSTTEEEEEEEEC
T ss_pred HHHhcCCCEEEEEEccCCCceEEEEEeC
Confidence 9999999999999999999999999986
No 10
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=100.00 E-value=3.4e-63 Score=510.55 Aligned_cols=374 Identities=31% Similarity=0.451 Sum_probs=307.9
Q ss_pred CCceEEEecccccccc-cCccCCCCCHHHHHHHHHHHHHHH-cCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC
Q psy1213 46 GKNIVFVDGVRTPFLL-SGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD 122 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~-~~~~~~~~~~~~La~~A~~~Al~~-agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~ 122 (472)
++++|||+++||||++ +++.+.++++.+|+.+|+++||++ +|+++++||.+++++..++.. .++++++++..+|+|.
T Consensus 6 ~~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~ 85 (407)
T 3svk_A 6 SEEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPE 85 (407)
T ss_dssp -CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCT
T ss_pred CCCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCC
Confidence 4689999999999996 566778899999999999999999 999999999999999887653 5789999999999976
Q ss_pred CCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCC
Q psy1213 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFF 202 (472)
Q Consensus 123 ~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (472)
.+|+++|+++|+|++++|..|+++|++|++|++||+|+|+||+.|+...... . ..+. .+
T Consensus 86 ~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~-----------~------~~~~----~~ 144 (407)
T 3svk_A 86 TTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGA-----------W------ATDP----ET 144 (407)
T ss_dssp TCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC----------------------C------CCCT----TT
T ss_pred CCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccc-----------c------ccCc----hh
Confidence 8999999999999999999999999999999999999999998776431100 0 0000 00
Q ss_pred CCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc--ceeeccCCCc-cC
Q psy1213 203 IPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD--KTISKDNGVR-VS 278 (472)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~--~~~~~de~~~-~~ 278 (472)
..+ .....|++.+++++++|+++|++|++|+..+|++|..|.++|+|+ +++|+...+ ..++.|+.+| ++
T Consensus 145 --~~~-----~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~ 217 (407)
T 3svk_A 145 --NYR-----IGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDT 217 (407)
T ss_dssp --CCC-----CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTC
T ss_pred --hcc-----ccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCC
Confidence 001 112468999999999999999999999999999999999999997 589986422 1367788888 49
Q ss_pred CHHHHhcCCCcccCCCCc---------------------eeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEe
Q psy1213 279 TPEQMAKLKPAFVKPHGS---------------------VTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~---------------------l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~ 337 (472)
|+|++++++|+| .|.+. +|.+|||+++|||+++||++++.|++++.+|+++|+|++..
T Consensus 218 t~e~l~~~~~vf-~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~ 296 (407)
T 3svk_A 218 TMEGLAKLKTAF-DGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATS 296 (407)
T ss_dssp CHHHHHTSCBSC-C-------------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC
T ss_pred CHHHHhhCCCee-cCCCccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEe
Confidence 999999999998 34443 48999999999999999999999999999999999999998
Q ss_pred ccCCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCC
Q psy1213 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGS 417 (472)
Q Consensus 338 ~~~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~ 417 (472)
+++|.. +..++..+++++|+++|++++|||++|+||+|+.+++..+|.|| | +.++||++||+
T Consensus 297 ~~~p~~-~~~~~~~a~~~al~~Agl~~~dId~~e~hdaf~~~~l~~~~~lg---~--------------~~~~vn~~Gg~ 358 (407)
T 3svk_A 297 GSDPVI-MLTGPTPATRKVLDRAGLTIDDIDLFELNEAFASVVLKFQKDLN---I--------------PDEKLNVNGGA 358 (407)
T ss_dssp -------CCCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCH
T ss_pred ccCCcc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEeChhHHHHHHHHHHhC---C--------------CCCCCCCCCcH
Confidence 777654 57788999999999999999999999999999999999999999 4 44459999999
Q ss_pred ccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 418 LSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 418 ~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++|||+||||+++++++++||+++.+++||++.|++||+|.++|||+.
T Consensus 359 ~~~GHp~gasG~~~~~~~~~~L~~~~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 359 IAMGHPLGATGAMITGTMVDELERRNARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp HHHCBCGGGHHHHHHHHHHHHHHHHTCCEEEEEEECSSSCEEEEEEEEC
T ss_pred hheeCcHHHHHHHHHHHHHHHHHhcCCCEEEEEeeccCcceEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999984
No 11
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=100.00 E-value=1.2e-62 Score=505.90 Aligned_cols=386 Identities=30% Similarity=0.462 Sum_probs=326.9
Q ss_pred CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc
Q psy1213 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125 (472)
Q Consensus 46 ~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~ 125 (472)
++++||||++||||++..+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++..++..+|++..+|
T Consensus 5 ~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p 84 (397)
T 1wl4_A 5 SDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP 84 (397)
T ss_dssp CSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC
T ss_pred CCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc
Confidence 46899999999999997777778999999999999999999999999999999998877666789999999999965799
Q ss_pred eeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCC
Q psy1213 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPE 205 (472)
Q Consensus 126 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (472)
+++|+++|+|++.||.+|++.|++|++|++||+|+|+|+..|+.....+ ... .+. ...++...
T Consensus 85 ~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~-------~~~--~~~-~~~~~~~~------- 147 (397)
T 1wl4_A 85 AWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRT-------GVK--IGE-MPLTDSIL------- 147 (397)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSS-------CCS--SSC-CCCEEHHH-------
T ss_pred EEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccc-------ccc--cCc-ccccchhc-------
Confidence 9999999999999999999999999999999999999998775421000 000 000 00000000
Q ss_pred cccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceecc----ceeeccCCCc-cCC
Q psy1213 206 LPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGD----KTISKDNGVR-VST 279 (472)
Q Consensus 206 ~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~----~~~~~de~~~-~~t 279 (472)
..++.++.....|++++++|+++||+|||++++|++++|++|.+|+.+|+|+ |+.|+.... ..++.|+.+| ++|
T Consensus 148 ~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t 227 (397)
T 1wl4_A 148 CDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSN 227 (397)
T ss_dssp HHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCC
T ss_pred cccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCC
Confidence 0001111112569999999999999999999999999999999999999997 588986521 1245677776 489
Q ss_pred HHHHhcCCCcccC-CCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVK-PHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 280 ~~~~~~~~p~~~~-~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
+|+|++++|+|.. .+|++|++|||+++|||+++||++++.|++++.+|+++|+|++.....|.. +..++..++++||+
T Consensus 228 ~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~~-~~~~~~~a~~~al~ 306 (397)
T 1wl4_A 228 IEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGVEPSI-MGIGPIPAIKQAVT 306 (397)
T ss_dssp HHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeecChhh-ccchHHHHHHHHHH
Confidence 9999999998732 238999999999999999999999999999999999999999998876643 56788999999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
++|++++|||+||+||+|+++.+..++.|| + +..++|++||++++|||+||||+++++++++|
T Consensus 307 ~Agl~~~dId~ie~~d~f~~~~l~~~~~lg---~--------------~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~ 369 (397)
T 1wl4_A 307 KAGWSLEDVDIFEINEAFAAVSAAIVKELG---L--------------NPEKVNIEGGAIALGHPLGASGCRILVTLLHT 369 (397)
T ss_dssp HHTCCGGGCCEEEECCSBHHHHHHHHHHHT---C--------------CGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHCCEEEEecccHHHHHHHHHHcC---C--------------CCcCcCCCcCccccCCChhhhHHHHHHHHHHH
Confidence 999999999999999999999999999999 4 33459999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
|+++.++++|+++|++||++.++|||+.
T Consensus 370 L~~~~~~~gl~~~~~ggG~~~a~~~e~~ 397 (397)
T 1wl4_A 370 LERMGRSRGVAALCIGGGMGIAMCVQRE 397 (397)
T ss_dssp HHHHTCCEEEEEEEETTTEEEEEEEEEC
T ss_pred HhhcCCCEEEEEEecccchheEEEEEeC
Confidence 9999999999999999999999999983
No 12
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=100.00 E-value=6.6e-63 Score=506.67 Aligned_cols=377 Identities=35% Similarity=0.543 Sum_probs=328.5
Q ss_pred cCCceEEEeccccccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFS 121 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~-~~~~~~~~~~~La~~A~~~Al~~a-gi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~ 121 (472)
+|++++|||++||||+++ ++.+.++++.+|+.+|+++||+|+ |+++++||.+++|+..+++. .++++.+++..+|++
T Consensus 3 ~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~ 82 (390)
T 1wdk_C 3 NPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIP 82 (390)
T ss_dssp CTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSC
T ss_pred CCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCC
Confidence 467899999999999997 567778999999999999999999 99999999999998877654 367899999999996
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
..+|+++|+++|+|++.+|++|++.|++|++|++||+|+|.++..|+.... + . +. .+
T Consensus 83 ~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~-~-------~------------~~---~~ 139 (390)
T 1wdk_C 83 HTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGV-D-------P------------NP---HM 139 (390)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTB-C-------C------------CG---GG
T ss_pred CCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCccccc-c-------c------------Cc---cc
Confidence 679999999999999999999999999999999999999999876653210 0 0 00 00
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec---c--ceeeccCCC
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG---D--KTISKDNGV 275 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~---~--~~~~~de~~ 275 (472)
.. + ++.....|++.+++|+++||+|++++++|++++|++|..|++.|+|+ ++.|.+.. + ++|+.|+.+
T Consensus 140 ~~---~---~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~ 213 (390)
T 1wdk_C 140 SL---Y---AAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETI 213 (390)
T ss_dssp GG---T---SCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTC
T ss_pred cc---c---CCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeecccccc
Confidence 00 0 00111348999999999999999999999999999999999999986 57898641 1 589999888
Q ss_pred cc-CCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHH
Q psy1213 276 RV-STPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYAT 353 (472)
Q Consensus 276 ~~-~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~ 353 (472)
|+ +|+|+|++++|++ +| +|.+|++|||+++|||+++||++++.|++++.+|+++|+|++...++|.. +..++..++
T Consensus 214 r~~~t~e~~~~~~~i~-~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~ 291 (390)
T 1wdk_C 214 RPDTTLESLAALKPAF-NPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAI-MGYGPVPAT 291 (390)
T ss_dssp CTTCCHHHHHTSCCSS-CTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCGGG-GGGTHHHHH
T ss_pred CCCCCHHHHhcCCCcc-cCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccChhh-cchhHHHHH
Confidence 85 8999999999999 56 88899999999999999999999999999999999999999998776653 567889999
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
++||++||++++|||++|+||+|+++.+..+|.|| ||++. ..++|++||++++|||+||+|+++++
T Consensus 292 ~~al~~Agl~~~dId~ve~~d~f~~~~~~~~~~lg---~~~~~-----------~~~vn~~gg~~~~GHp~gasG~~~~~ 357 (390)
T 1wdk_C 292 QKALKRAGLNMADIDFIELNEAFAAQALPVLKDLK---VLDKM-----------NEKVNLHGGAIALGHPFGCSGARISG 357 (390)
T ss_dssp HHHHHHHTCCGGGCCEEEECCSBHHHHHHHHHHTT---CGGGH-----------HHHBSTTCCHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcEEEeccCCHHHHHHHHHHcC---CCCCC-----------CCcCCCCcCcccccCCcchhHHHHHH
Confidence 99999999999999999999999999999999999 66320 12399999999999999999999999
Q ss_pred HHHHHHhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++.+++||+++|++||++.++|||+.
T Consensus 358 ~~~~~L~~~~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 358 TLLNVMKQNGGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp HHHHHHHHTTCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHhhcCCCEEEEEecccchheEEEEEEeC
Confidence 999999999999999999999999999999973
No 13
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=100.00 E-value=5.6e-62 Score=500.83 Aligned_cols=384 Identities=33% Similarity=0.520 Sum_probs=328.5
Q ss_pred cCCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC
Q psy1213 45 TGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT 124 (472)
Q Consensus 45 ~~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~ 124 (472)
.+++++|||++||||+++.+.+.++++.+|+.+|+++||+|+|+++++||.+++|+..+++..++++..++..+|++..+
T Consensus 6 ~~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~ 85 (395)
T 2ib8_A 6 TLKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPIST 85 (395)
T ss_dssp BCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTC
T ss_pred CCCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCc
Confidence 45689999999999999877777899999999999999999999999999999999888777788999999999996579
Q ss_pred ceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCC
Q psy1213 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204 (472)
Q Consensus 125 ~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (472)
|+++|+++|+|++.||.+|+++|++|++|++||+|+|.++..|+...... ...+. ....+.. .
T Consensus 86 p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~----------~~~~~-~~~~~~~---~--- 148 (395)
T 2ib8_A 86 PCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGS----------TPYGG-VKLEDLI---V--- 148 (395)
T ss_dssp CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSB----------CCTTC-EEEEEHH---H---
T ss_pred eEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccc----------ccccc-ccccccc---c---
Confidence 99999999999999999999999999999999999999988765321000 00000 0000000 0
Q ss_pred CcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceec--cc---eeeccCCCccC
Q psy1213 205 ELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVG--DK---TISKDNGVRVS 278 (472)
Q Consensus 205 ~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~--~~---~~~~de~~~~~ 278 (472)
+..++++.....|++.+++|+++||+|+++++++++++|++|..|+..|+|+ ++.|+... ++ .++.||.++++
T Consensus 149 -~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~ 227 (395)
T 2ib8_A 149 -KDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRV 227 (395)
T ss_dssp -HHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSC
T ss_pred -ccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccC
Confidence 0111122234579999999999999999999999999999999999999887 47887652 23 37889999988
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcccccccHHHHHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLE 358 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~~~~~~~~a~~~Al~ 358 (472)
+.+.+.+++|+|.+++|++|++|||+++|||+++||++++.|++++.+|+++|+|++....+|.. +..++..++++||+
T Consensus 228 ~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~p~~-~~~~~~~a~~~al~ 306 (395)
T 2ib8_A 228 DFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAAVEPID-FPIAPVYAASMVLK 306 (395)
T ss_dssp CTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCGGG-GGGHHHHHHHHHHH
T ss_pred CHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEeccChhh-ccccHHHHHHHHHH
Confidence 89999999999966679999999999999999999999999999999999999999987666643 45677899999999
Q ss_pred HcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHH
Q psy1213 359 RAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANR 438 (472)
Q Consensus 359 ~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~q 438 (472)
+||++++|||++|+||+|+++.+..+|+|| || .+++|++||++++|||+||||+++++++++|
T Consensus 307 ~Agl~~~dId~ie~~D~f~~~~l~~~e~lg---~~--------------~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~ 369 (395)
T 2ib8_A 307 DVGLKKEDIAMWEVNEAFSLVVLANIKMLE---ID--------------PQKVNINGGAVSLGHPIGMSGARIVGHLTHA 369 (395)
T ss_dssp HHTCCGGGEEEEEECCSBHHHHHHHHHHHT---CC--------------GGGBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHcCEEEEccccHHHHHHHHHHcC---CC--------------ccccCCCcchhhcCCChhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 43 3359999999999999999999999999999
Q ss_pred HhhccCCcchhhhhccCcceeEEEEEeC
Q psy1213 439 LVREDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 439 L~~~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
||+ +++||++.|++||++.+++||+.
T Consensus 370 L~~--~~~gl~~~~~ggG~g~a~~~~~~ 395 (395)
T 2ib8_A 370 LKQ--GEYGLASICNGGGGASAMLIQKL 395 (395)
T ss_dssp SCT--TCEEEEEEEETTTEEEEEEEEEC
T ss_pred Hhh--CCceEEEEecccCHhheEEEEcC
Confidence 997 78999999999999999999973
No 14
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=100.00 E-value=5.8e-51 Score=430.55 Aligned_cols=385 Identities=17% Similarity=0.104 Sum_probs=273.8
Q ss_pred cccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCC------------CC
Q psy1213 41 VKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE------------VK 106 (472)
Q Consensus 41 ~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~------------~~ 106 (472)
||..+.+ ..+|||+++|++.+..+.+.+.++.||+.+|+++||+|+|+++++||.+|.|+.... ..
T Consensus 10 ~ma~mvdPRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~ 89 (520)
T 4egv_A 10 HMASMVDPRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGV 89 (520)
T ss_dssp -----CCTTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC-------------
T ss_pred hhhccCCCCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhcc
Confidence 4444443 678999999999876666778999999999999999999999999887665543221 12
Q ss_pred CChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCC
Q psy1213 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKT 186 (472)
Q Consensus 107 ~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~ 186 (472)
..+++..++..+|++ ..+.++++.+|+|++.+|+.|++.|++|++|++|++|+|+||+.|+.........+........
T Consensus 90 ~~~~~~~va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~ 168 (520)
T 4egv_A 90 SSNYPRSVARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQL 168 (520)
T ss_dssp -CCHHHHHHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------
T ss_pred ccCHHHHHHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccc
Confidence 356788999999997 6889999999999999999999999999999999999999999887543221111100000000
Q ss_pred chhhhhhhhccCCCCCCCCccccccccc-CCchhHHHHHHHHHhCCCHHH----HHHHHHHhHHHHHHHHHcCCCCCCcc
Q psy1213 187 PADRLKLLATIRPDFFIPELPAVAEFSS-GETMGHSADRLAAAFKVSRKE----QDEYALRSHTLAQQAQEKGYLTDILP 261 (472)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~g~t~e~----~~~~a~~~~~~a~~a~~~g~~~~~~P 261 (472)
.. ..+........+...++... ...+++.+++|+++|++++++ +..+++++++++.. ||
T Consensus 169 ~~------~~~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~----------np 232 (520)
T 4egv_A 169 ED------RGYGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAK----------NP 232 (520)
T ss_dssp ------------------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH----------CT
T ss_pred cc------cccccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEeccccccc----------Cc
Confidence 00 00000000000111111111 234678899999999999764 56777888887765 78
Q ss_pred ceeccceeeccCCCccCCHHHHhcCCCcccCC-CCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccC
Q psy1213 262 IQVGDKTISKDNGVRVSTPEQMAKLKPAFVKP-HGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQD 340 (472)
Q Consensus 262 ~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~-~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~ 340 (472)
.++.+++ +|+|++++++|.+..- ++..|+.|||+++|||+|+||+|++.|+++|++|+++|++++....+
T Consensus 233 ~a~~r~~---------~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~ 303 (520)
T 4egv_A 233 YSSAPTE---------RSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMK 303 (520)
T ss_dssp TSSSCCC---------CCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEE
T ss_pred cccccCC---------CCHHHhcccCcccccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccC
Confidence 7765433 5899999887766321 34457789999999999999999999999999999999888876654
Q ss_pred Cccc-------ccccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCC
Q psy1213 341 PKDQ-------LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNN 413 (472)
Q Consensus 341 p~~~-------~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~ 413 (472)
|... ...++..+++++|++||++++|||++|+||||++++++.+|+|| ||++++ .++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~~~l~~~~~lG---~~~~~~-----------~~~n~ 369 (520)
T 4egv_A 304 EPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPFPVFNICDGTG---LATDDP-----------RGLTL 369 (520)
T ss_dssp CCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSHHHHHHHHHHC---CCTTCT-----------TCSCS
T ss_pred CcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHHHHHHHHHHhC---CCCCCC-----------CCcCC
Confidence 3321 12355789999999999999999999999999999999999999 777543 23999
Q ss_pred CCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcc---eeEEEEEeCC
Q psy1213 414 WGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQ---GVGMIIERHP 467 (472)
Q Consensus 414 ~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~---~~a~~l~~~~ 467 (472)
+||++++|||++++|++.++|+++|||++.++++|++ ..||. ..+++|.+.|
T Consensus 370 ~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~~--~~gg~~~~~~~~~l~~~~ 424 (520)
T 4egv_A 370 TGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALVG--ANGGIASKYSVGIYSTEP 424 (520)
T ss_dssp SCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEEE--EEETTTTEEEEEEEESSC
T ss_pred CcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEEe--CCCCeeeeeeEEEEcCCC
Confidence 9999999999999999999999999999999999996 33564 5667777754
No 15
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=100.00 E-value=1.5e-34 Score=299.54 Aligned_cols=280 Identities=20% Similarity=0.209 Sum_probs=211.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCc-cC----EEEEEeecC--------------------------CCCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISKDL-ID----YIVYGTVIQ--------------------------EVKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~-Id----~vi~g~~~~--------------------------~~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++++ +| ++++|+..+ ....+..+.+++..+
T Consensus 86 ~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 165 (428)
T 3kzu_A 86 PFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKH 165 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHc
Confidence 46789999999999999999998 88 688887532 122345688999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 166 gl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~------------------- 218 (428)
T 3kzu_A 166 KL--RGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVS-RISL-----AGFA------------------- 218 (428)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH-------------------
T ss_pred CC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCC-HHHH-----HHHH-------------------
Confidence 99 5799999999999999999999999999999999999998432 1000 0000
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+++.+++.+ .|.. ..++|+.+
T Consensus 219 -----------------------~~~~ls~~~~~---------------------------~~~~-~~~pfd~~------ 241 (428)
T 3kzu_A 219 -----------------------ACKALSTERND---------------------------DPTA-ASRPYDED------ 241 (428)
T ss_dssp -----------------------HTTCBCCSCTT---------------------------SGGG-TCCTTBTT------
T ss_pred -----------------------HccccccCccC---------------------------Cccc-ccCCcccC------
Confidence 00000000000 0100 00122111
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+... .....+...+++
T Consensus 242 ---------------------~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 300 (428)
T 3kzu_A 242 ---------------------RDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMV 300 (428)
T ss_dssp ---------------------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred ---------------------CCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHH
Confidence 3455599999999999999999999999999999998764211 112345689999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
+||++||++++|||++|+|++++.....+++++... |.. +..++|++|++..+|||.||+|+.++++
T Consensus 301 ~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~-~g~------------~~~~~~v~s~k~~~GH~~gAsG~~~~i~ 367 (428)
T 3kzu_A 301 AALKRAGIVPDEIDYINAHGTSTMADTIELGAVERV-VGE------------AAAKISMSSTKSSIGHLLGAAGAAEAVF 367 (428)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHH-HGG------------GGGGCEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHH-hcc------------CCCceeeCCchhhhCCCchhhHHHHHHH
Confidence 999999999999999999999997788877777521 211 2235899999999999999999999999
Q ss_pred HHHHHhhc---------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 435 AANRLVRE---------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 435 ~v~qL~~~---------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++||+++ ..+++++++++.||.++++||++.+
T Consensus 368 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 368 STLAIRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp HHHHHHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHhccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeecC
Confidence 99999975 1257888899999999999999864
No 16
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-32 Score=283.16 Aligned_cols=278 Identities=18% Similarity=0.163 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCC-----------------CC---------CChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQE-----------------VK---------TSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~-----------------~~---------~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..+. .. ...++.+++..+|
T Consensus 73 ~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 152 (413)
T 3o04_A 73 RFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFG 152 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhC
Confidence 3567999999999999999999999 9999986421 11 1234788999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.... .. ..+.
T Consensus 153 l--~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~-~~-----~~~~-------------------- 204 (413)
T 3o04_A 153 A--KGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKM-SL-----AGFT-------------------- 204 (413)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHH-HH-----HHHH--------------------
T ss_pred C--CCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHH-HH-----HHHH--------------------
Confidence 9 479999999999999999999999999999999999999854211 00 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~~ 278 (472)
..+.+.. ..|... .++|+.+
T Consensus 205 ----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~~------ 225 (413)
T 3o04_A 205 ----------------------------------------------------ANKALSLNPDPETA-CRPFDKD------ 225 (413)
T ss_dssp ----------------------------------------------------HTTCBCCCCCTTTS-CCTTBTT------
T ss_pred ----------------------------------------------------hcccccCCCCCCCC-cCCCcCC------
Confidence 0000000 011110 0122111
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++++.|++++.+++++|.|++...+... .....+...+++
T Consensus 226 ---------------------~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~ 284 (413)
T 3o04_A 226 ---------------------RDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMK 284 (413)
T ss_dssp ---------------------CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred ---------------------CCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 2344599999999999999999999999999999998765211 112334678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|+++|. .+.++++++... |++. ..++|+++++..+|||.||+|+.+++
T Consensus 285 ~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~-~~~~------------~~~~~v~s~k~~~GH~~gAsG~~~~~ 351 (413)
T 3o04_A 285 MAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTV-FGEH------------AKKLAISSTKSMTGHTLGASGGIEAI 351 (413)
T ss_dssp HHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHH-HGGG------------TTTSEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-hccc------------CCCCceecccccccccHHHHHHHHHH
Confidence 999999999999999999999997 466777776522 3321 12378888889999999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
++++||+++. .++++++++++||.++++||++.++
T Consensus 352 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~~~ 413 (413)
T 3o04_A 352 FALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRIED 413 (413)
T ss_dssp HHHHHHHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECCCC
T ss_pred HHHHHHHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeCCC
Confidence 9999998752 2577888999999999999998753
No 17
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.4e-32 Score=283.95 Aligned_cols=274 Identities=14% Similarity=0.176 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-----------------C---------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV-----------------K---------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~-----------------~---------~~~~a~~ia~~lGl 120 (472)
..+|+++|+++||+|+|+++++|| +|++|+..++. . ...++.+++..+|+
T Consensus 77 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 156 (416)
T 1e5m_A 77 FCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA 156 (416)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCC
Confidence 458999999999999999999999 79999865431 0 12478899999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc-CCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM-SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+ +...+. .+.
T Consensus 157 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~-------~~~-------------------- 207 (416)
T 1e5m_A 157 --KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYA-------GFA-------------------- 207 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHH-------HHH--------------------
T ss_pred --CCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHH-------HHH--------------------
Confidence 47999999999999999999999999999999999999974 321100 000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCcc
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~ 277 (472)
. .+.+.. .+|... .+||+.+
T Consensus 208 ----------------------------~------------------------~~~ls~~~~~p~~~-~rpfd~~----- 229 (416)
T 1e5m_A 208 ----------------------------S------------------------ARALSFRNDDPLHA-SRPFDKD----- 229 (416)
T ss_dssp ----------------------------H------------------------TTCBCCCTTCGGGT-CCTTBTT-----
T ss_pred ----------------------------H------------------------cCCccCCCCCCccc-cccCccC-----
Confidence 0 000000 012111 1222211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~ 353 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++
T Consensus 230 ----------------------~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai 287 (416)
T 1e5m_A 230 ----------------------RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAI 287 (416)
T ss_dssp ----------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred ----------------------CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHH
Confidence 34555999999999999999999999999999999987653211 1234468899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
++||+++|++++|||++|+|++++.. +.++++++... |.+. .+ ++++++.+..+||+.+|+|+.++
T Consensus 288 ~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~-------~~-----~~~v~s~k~~~GH~~gAaG~~~~ 354 (416)
T 1e5m_A 288 AWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQA-LGNH-------AY-----NIAVSSTKSMTGHLLGGSGGIEA 354 (416)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GG-----GSEEECTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHH-Hccc-------CC-----CCeeeCcchhhcccHHHHHHHHH
Confidence 99999999999999999999999973 66666666521 3111 11 24444445558999999999999
Q ss_pred HHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 433 VHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 433 ~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++||+++. .+++++++++.||.++++||++.
T Consensus 355 i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~~ 415 (416)
T 1e5m_A 355 VATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKKY 415 (416)
T ss_dssp HHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEeC
Confidence 99999999752 25778889999999999999974
No 18
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=100.00 E-value=1.3e-32 Score=285.09 Aligned_cols=275 Identities=21% Similarity=0.216 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCC--------------------------CCCChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQE--------------------------VKTSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~ia~~lGl 120 (472)
...|+++|+++||+|+|+++++|| ++++|+..+. .....++.+++..+|+
T Consensus 88 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 88 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 567999999999999999999999 6888876421 1123467899999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++. |... ..+. .
T Consensus 168 --~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~----------------~---- 219 (427)
T 3ho9_A 168 --RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAST-PLGV-----GGFG----------------A---- 219 (427)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH----------------H----
T ss_pred --CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH-----HHHH----------------h----
Confidence 5799999999999999999999999999999999999999863 1110 0000 0
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCccC
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~~~ 278 (472)
.+.+.. ..|... .++|+.
T Consensus 220 ----------------------------------------------------~~~ls~~~~~~~~~-~~pfd~------- 239 (427)
T 3ho9_A 220 ----------------------------------------------------ARALSTRNDNPQAA-SRPWDK------- 239 (427)
T ss_dssp ----------------------------------------------------TTCBCCCTTCHHHH-CCTTBT-------
T ss_pred ----------------------------------------------------ccCcccCCCCCCcc-cCCccC-------
Confidence 000000 001000 012211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~ 354 (472)
. .++..++|||+++||++++.|++++.+++++|.|++...+... .....+...+++
T Consensus 240 -------------~-------~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 299 (427)
T 3ho9_A 240 -------------E-------RDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMA 299 (427)
T ss_dssp -------------T-------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHH
T ss_pred -------------C-------CCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHH
Confidence 1 2334489999999999999999999999999999998765211 113445688999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|+++|.. ...+++++... |.. +..++|+++++..+|||.||+|+.+++
T Consensus 300 ~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~-~g~------------~~~~~~v~s~k~~~GH~~gAsG~~~~i 366 (427)
T 3ho9_A 300 NALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTI-FGE------------AASRVLVSSTKSMTGHLLGAAGAVESI 366 (427)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGG------------GGGTSEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHH-hcc------------cCCCeEEecchHhhccCHHHHHHHHHH
Confidence 9999999999999999999999963 33444443311 211 223489999999999999999999999
Q ss_pred HHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++ ..++++++++++||.++++||++.
T Consensus 367 ~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 367 YSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp HHHHHHHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEeC
Confidence 999999875 236788899999999999999873
No 19
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=100.00 E-value=1.2e-32 Score=283.72 Aligned_cols=277 Identities=20% Similarity=0.247 Sum_probs=204.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| ++++++..+++ ....++.+++..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (408)
T 1j3n_A 70 RFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYG 149 (408)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhC
Confidence 4678999999999999999999999 47777655432 01246889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 150 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~-------------------- 201 (408)
T 1j3n_A 150 F--TGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAIT-PMAI-----GAFA-------------------- 201 (408)
T ss_dssp C--CSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCC-HHHH-----HHHH--------------------
Confidence 9 4799999999999999999999999999999999999997432 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
..+++..++.+++ .. .+||+.
T Consensus 202 ----------------------~~~~ls~~~~~p~----------------------------~~-~~pfd~-------- 222 (408)
T 1j3n_A 202 ----------------------VMRALSTRNEEPE----------------------------KA-SRPFTL-------- 222 (408)
T ss_dssp ----------------------HTTCBCCCTTCHH----------------------------HH-CCTTBT--------
T ss_pred ----------------------hcccccCCCCCCC----------------------------cC-cccCcC--------
Confidence 0000000000100 00 012211
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQ 355 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~ 355 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++++
T Consensus 223 -------------------~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~ 283 (408)
T 1j3n_A 223 -------------------SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMAR 283 (408)
T ss_dssp -------------------TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHH
T ss_pred -------------------CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHH
Confidence 124555899999999999999999999999999999987642111 123455789999
Q ss_pred HHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHH
Q psy1213 356 VLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 356 Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e 434 (472)
||++||++++|||++|+|++++.. ..++++++... |.. +..++|+++++..+||+.+|+|+.++++
T Consensus 284 al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~-~g~------------~~~~~~v~s~k~~~GH~~~AsG~~~li~ 350 (408)
T 1j3n_A 284 ALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRV-FGD------------HAKRLMVSSTKSMIGHLLGAAGAVEAIA 350 (408)
T ss_dssp HHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HHH------------HHTTCEEECTHHHHCBCGGGHHHHHHHH
T ss_pred HHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-hcC------------cCCCceEECchhhhccCHHHHHHHHHHH
Confidence 999999999999999999999974 33333333210 211 1223788889999999999999999999
Q ss_pred HHHHHhhcc--------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 435 AANRLVRED--------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 435 ~v~qL~~~~--------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++|+++. .+++++++++.||.++++||++
T Consensus 351 ~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 351 TVQALYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp HHHHHHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred HHHHHhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 999999742 3578888999999999999986
No 20
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.98 E-value=4.1e-32 Score=283.06 Aligned_cols=278 Identities=18% Similarity=0.192 Sum_probs=205.0
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCcc-C----EEEEEeecCC--------------------------CCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISKDLI-D----YIVYGTVIQE--------------------------VKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~I-d----~vi~g~~~~~--------------------------~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++++| | ++++|+..+. ...+.++.+++..+
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 180 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKH 180 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHh
Confidence 467899999999999999999999 7 7888875321 11234678999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ .+|+++|+++|+|+++||.+|+++|++|++|++||+|+|.++... . + ..+. .
T Consensus 181 gl--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~-~----~-~~~~----------------~-- 234 (451)
T 4ddo_A 181 RF--RGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKV-S----L-GGFA----------------A-- 234 (451)
T ss_dssp TC--CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHH-H----H-HHHH----------------H--
T ss_pred cC--CCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHH-H----H-HHHH----------------H--
Confidence 99 579999999999999999999999999999999999999865311 0 0 0000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC---CccceeccceeeccCCC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGV 275 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~---~~P~a~~~~~~~~de~~ 275 (472)
.+.+.+ ..|... .++|+.+
T Consensus 235 ------------------------------------------------------~~~ls~~~~~~~~~~-~~pfd~~--- 256 (451)
T 4ddo_A 235 ------------------------------------------------------ARALSTGFSEEPVRA-SRPFDRD--- 256 (451)
T ss_dssp ------------------------------------------------------TTCBCCSCTTSGGGS-CCTTBTT---
T ss_pred ------------------------------------------------------HhhhccCCCcCcccc-ccccccC---
Confidence 000000 001110 0122211
Q ss_pred ccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc----ccccHHH
Q psy1213 276 RVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ----LLLGPAY 351 (472)
Q Consensus 276 ~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~----~~~~~~~ 351 (472)
.+++.++|||+|+||++++.|++++.+++++|+|++...+..... ...+...
T Consensus 257 ------------------------~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 312 (451)
T 4ddo_A 257 ------------------------RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMR 312 (451)
T ss_dssp ------------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHH
T ss_pred ------------------------CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHH
Confidence 345558999999999999999999999999999999876421110 1224478
Q ss_pred HHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHH
Q psy1213 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVR 430 (472)
Q Consensus 352 a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~ 430 (472)
++++||++||++++|||++|+|++++.. +.++++++... |.. .+. +++++.+..+|||.||+|+.
T Consensus 313 ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~-~~~--------~~~-----~~v~s~k~~~GH~~gAaG~~ 378 (451)
T 4ddo_A 313 AMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTV-FGV--------GAG-----PAISSTKSATGHLLGAAGAI 378 (451)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HCS--------SSS-----CEEECTHHHHCBCGGGHHHH
T ss_pred HHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHH-hCC--------CCC-----CcccCchhhhccCHHHHHHH
Confidence 9999999999999999999999999963 55555555421 211 111 44455556689999999999
Q ss_pred HHHHHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeCCCC
Q psy1213 431 LTVHAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 431 ~v~e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~~~~ 469 (472)
+++++++||+++ ..+++++++++.||.++++||++.+..
T Consensus 379 ~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~~ 445 (451)
T 4ddo_A 379 EAAFSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPSD 445 (451)
T ss_dssp HHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence 999999999875 125678889999999999999998653
No 21
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.98 E-value=3.5e-32 Score=280.69 Aligned_cols=271 Identities=21% Similarity=0.207 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcCC
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAGF 120 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl 120 (472)
..+|+++|+++||+|+|+ +++| +|++|+..+++. ...++.+++..+|+
T Consensus 83 ~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl 160 (416)
T 2wge_A 83 VQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGA 160 (416)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhcc
Confidence 457999999999999998 4455 488888765431 12467889999999
Q ss_pred CCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCC
Q psy1213 121 SDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPD 200 (472)
Q Consensus 121 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (472)
++|+++++++|+|+++||++|+++|++|++|++||+|+|.++..... ..+.
T Consensus 161 --~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~------~~~~--------------------- 211 (416)
T 2wge_A 161 --RAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPI------AAFS--------------------- 211 (416)
T ss_dssp --CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHH------HHHH---------------------
T ss_pred --CCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHH------HHHH---------------------
Confidence 58999999999999999999999999999999999999987542100 0000
Q ss_pred CCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCH
Q psy1213 201 FFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTP 280 (472)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~ 280 (472)
..+++.+|+. .|... .+||+
T Consensus 212 ---------------------~~~~l~~~~~----------------------------~~~~~-~~pfd---------- 231 (416)
T 2wge_A 212 ---------------------MMRAMSTRND----------------------------EPERA-SRPFD---------- 231 (416)
T ss_dssp ---------------------TTTCBCCCTT----------------------------SGGGS-CCTTB----------
T ss_pred ---------------------hcchhhcccc----------------------------CCccc-ccccc----------
Confidence 0000000000 01000 01121
Q ss_pred HHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc----ccccccHHHHHHHH
Q psy1213 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK----DQLLLGPAYATPQV 356 (472)
Q Consensus 281 ~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~----~~~~~~~~~a~~~A 356 (472)
...++..++||++++||++++.|+++|.+++++|+|++...+... .....+...+++++
T Consensus 232 -----------------~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~a 294 (416)
T 2wge_A 232 -----------------KDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRS 294 (416)
T ss_dssp -----------------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHH
T ss_pred -----------------cCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHH
Confidence 113566699999999999999999999999999999998764211 11234568899999
Q ss_pred HHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHH
Q psy1213 357 LERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 357 l~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~ 435 (472)
|+++|++++|||++|+|+++|.. +.+++++++ .+ +. + ++++++++..+|||.||+|+.+++++
T Consensus 295 l~~agl~~~dId~ve~HgtgT~~gD~~E~~al~---~~--~~------~-----~~~v~s~k~~~GH~~gAsG~~~~i~~ 358 (416)
T 2wge_A 295 LELAGLSPADIDHVNAHGTATPIGDAAEANAIR---VA--GC------D-----QAAVYAPKSALGHSIGAVGALESVLT 358 (416)
T ss_dssp HHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHH---HT--TC------T-----TSEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHcCCCHHHCCEEEECCCCCcCCCHHHHHHHH---Hh--cc------C-----CCCccCCcccccCcHHHHHHHHHHHH
Confidence 99999999999999999999974 666666665 22 11 1 25666677789999999999999999
Q ss_pred HHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 436 ANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 436 v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++||+++. .+++++++++.||.++++||++
T Consensus 359 ~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 359 VLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp HHHHHHTEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHhcCCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 99999752 2578888999999999999986
No 22
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.98 E-value=1.8e-31 Score=277.13 Aligned_cols=276 Identities=14% Similarity=0.157 Sum_probs=207.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..++. ....++.+++..+|
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 4678999999999999999999999 99999875531 12357889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 177 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~-------------------- 228 (437)
T 2gqd_A 177 A--KGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPIT-HMAI-----AGFS-------------------- 228 (437)
T ss_dssp C--CSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----HHHH--------------------
Confidence 9 4699999999999999999999999999999999999998532 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+.+.. .+|... .+||+.
T Consensus 229 ----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~------- 248 (437)
T 2gqd_A 229 ----------------------------------------------------ASRALSTNDDIETA-CRPFQE------- 248 (437)
T ss_dssp ----------------------------------------------------HTTCBCCCCCTTTS-SCTTCT-------
T ss_pred ----------------------------------------------------hccCccCCCCCccc-cCCCCC-------
Confidence 0000000 012111 112211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...+++
T Consensus 249 --------------------~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 308 (437)
T 2gqd_A 249 --------------------GRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQ 308 (437)
T ss_dssp --------------------TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHH
T ss_pred --------------------CCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 135556999999999999999999999999999999987663221 12334578999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||+||+|++++.. +.+++++++.. |.+. .++ +++++.+..+||+.+|+|+.+++
T Consensus 309 ~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~-fg~~-------~~~-----~~v~s~k~~~GH~~gAaG~~~li 375 (437)
T 2gqd_A 309 AAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNT-FGEA-------AKH-----LKVSSTKSMTGHLLGATGGIEAI 375 (437)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GTS-----CEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHH-Hhcc-------CCC-----ceeecchhhhcCChhhhhHHHHH
Confidence 9999999999999999999999974 66666666521 3211 122 44444445589999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
++++||+++. .+++++++++.||.++++||++.
T Consensus 376 ~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 376 FSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp HHHHHHHHTEECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred HHHHHHhcCCCCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 9999999752 25788889999999999999985
No 23
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.98 E-value=3.4e-32 Score=282.18 Aligned_cols=280 Identities=18% Similarity=0.201 Sum_probs=207.8
Q ss_pred CHHHHHHHHHHHHHHHcCC-CcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGI-SKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi-~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+ +++++| +|++|+..+.. ....++.+++..+
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 3568999999999999999 999888 68998765431 0125788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+.. ..+. .
T Consensus 167 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------~~~~----------------~-- 220 (431)
T 2ix4_A 167 GF--QGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSV------AGFS----------------R-- 220 (431)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHH------HHHH----------------H--
T ss_pred CC--CCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH------HHHH----------------h--
Confidence 99 47999999999999999999999999999999999999987542110 0000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccC
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~ 278 (472)
++.++ .+|+.+ |.... +||+.
T Consensus 221 -------------------~~~ls----~~~~~~----------------------------~~~~~-~pfd~------- 241 (431)
T 2ix4_A 221 -------------------SRALS----TKFNSS----------------------------PQEAS-RPFDC------- 241 (431)
T ss_dssp -------------------TTCBC----CTTTTC----------------------------GGGSC-CTTBT-------
T ss_pred -------------------ccccC----ccccCC----------------------------ccccc-ccCCC-------
Confidence 00000 001111 11110 12211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++++.|++++.+++++|+|++...+.... ....+...+++
T Consensus 242 --------------------~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~ 301 (431)
T 2ix4_A 242 --------------------DRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMT 301 (431)
T ss_dssp --------------------TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHH
T ss_pred --------------------CCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHH
Confidence 135556999999999999999999999999999999987642111 12345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|+++|. .+.++++++... |++... +++ +++++++..+|||.||+|+.+++
T Consensus 302 ~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~-~~~~~~-----~~~-----~~v~s~k~~~GH~~gAsG~~~li 370 (431)
T 2ix4_A 302 RALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTV-FSEHAT-----SGT-----LAFSSTKGATGHLLGAAGAVEAI 370 (431)
T ss_dssp HHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HTHHHH-----TSC-----SEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHH-Hccccc-----CCC-----ceeecchhhhcccHHHHHHHHHH
Confidence 999999999999999999999996 356666666522 433221 122 45556777899999999999999
Q ss_pred HHHHHHhhcc----------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 434 HAANRLVRED----------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~----------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++||+++. .+++++++++.||.++++||++
T Consensus 371 ~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 371 FSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp HHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHhcCCcCCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence 9999999752 2578888999999999999986
No 24
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.98 E-value=1.5e-31 Score=275.85 Aligned_cols=272 Identities=20% Similarity=0.201 Sum_probs=203.3
Q ss_pred CHHHHHHHHHHHHHHHcCC-CcCccC----EEEEEeecCC--------------------------CCCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGI-SKDLID----YIVYGTVIQE--------------------------VKTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi-~~~~Id----~vi~g~~~~~--------------------------~~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+ ++++|| ++++|+..+. ...+.++.+++..+
T Consensus 76 ~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 155 (412)
T 4ewg_A 76 RVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFW 155 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHh
Confidence 3677999999999999999 788888 8888876532 11245788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+.. .+. ..
T Consensus 156 gl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~-------~~~----------------~~- 209 (412)
T 4ewg_A 156 DL--KGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVA-------VFD----------------TL- 209 (412)
T ss_dssp TC--CSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------HHH----------------TT-
T ss_pred CC--CCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHH-------HHH----------------Hh-
Confidence 99 47999999999999999999999999999999999999986532111 000 00
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--CccceeccceeeccCCCc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~de~~~ 276 (472)
+.+.+ ..|... .+||+.+
T Consensus 210 -------------------------------------------------------~~l~~~~~~p~~~-~rpfd~~---- 229 (412)
T 4ewg_A 210 -------------------------------------------------------YATSTRNDEPHLT-PRPFDAK---- 229 (412)
T ss_dssp -------------------------------------------------------TCBCCCTTCGGGC-CCTTBTT----
T ss_pred -------------------------------------------------------hccccCCCCCCCC-CCCCCCC----
Confidence 00000 011110 0222211
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc--ccccccHHHHHH
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK--DQLLLGPAYATP 354 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~--~~~~~~~~~a~~ 354 (472)
.++..++|||+++||++++.|++++.+++++|+|++...+... .+...+...+++
T Consensus 230 -----------------------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~ai~ 286 (412)
T 4ewg_A 230 -----------------------RDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTASTMARAMQ 286 (412)
T ss_dssp -----------------------CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCCHHHHHHHHH
T ss_pred -----------------------CCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHH
Confidence 2455589999999999999999999999999999998765221 112345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||++||++++|||++|+|++++.. +..+++++... |. +++| |+. .+..+|||.||+|+.+++
T Consensus 287 ~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~~----------~~~~---v~s--~K~~~GH~~gAsG~~~~~ 350 (412)
T 4ewg_A 287 LALEDAKLDANAIAYVNAHGTSTDRGDVAESQATART-FG----------ERMP---ISS--LKSYVGHTLGACGALEAW 350 (412)
T ss_dssp HHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHH-HC----------TTCE---EEC--THHHHCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHH-cC----------CCCe---eeC--ccccccccHHHHHHHHHH
Confidence 9999999999999999999999963 44555555421 21 1244 554 333469999999999999
Q ss_pred HHHHHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeC
Q psy1213 434 HAANRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 434 e~v~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++|+++ ..++.++++++.||.++++||++.
T Consensus 351 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~ 411 (412)
T 4ewg_A 351 WTIEMMKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV 411 (412)
T ss_dssp HHHHHHHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred HHHHHHhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence 999999874 125778889999999999999986
No 25
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.97 E-value=3.1e-31 Score=274.75 Aligned_cols=276 Identities=17% Similarity=0.149 Sum_probs=205.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC--------------------------CChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK--------------------------TSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~--------------------------~~~~a~~ia~~lG 119 (472)
+..+|+++|+++||+|+|+++++|| ++++|+..+++. .+.++.+++..+|
T Consensus 91 ~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 170 (428)
T 3mqd_A 91 RGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFK 170 (428)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcC
Confidence 5788999999999999999999999 788887654321 2357889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..+... +.. +.
T Consensus 171 l--~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~-------~~~----------~~------- 224 (428)
T 3mqd_A 171 I--KGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVL-------FDA----------MG------- 224 (428)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------HHH----------TT-------
T ss_pred C--CCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHH-------HHH----------hh-------
Confidence 9 579999999999999999999999999999999999999976422110 000 00
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVST 279 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t 279 (472)
.+ +++. ...|... .+||+.+
T Consensus 225 -~l-----------------------------s~~~----------------------~~~p~~~-~rpfd~~------- 244 (428)
T 3mqd_A 225 -AM-----------------------------SSKY----------------------NDTPSTA-SRAYDKN------- 244 (428)
T ss_dssp -CB-----------------------------CCTT----------------------TTSGGGS-CCTTBTT-------
T ss_pred -hh-----------------------------cccc----------------------cCCcccc-cCcccCC-------
Confidence 00 0000 0011111 1222211
Q ss_pred HHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHHHHHHH
Q psy1213 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYATPQVL 357 (472)
Q Consensus 280 ~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~~Al 357 (472)
.+|. .++|||+++||++++.|+++|.+++++|+|++...+.... +...++..++++||
T Consensus 245 -------------~~G~-------v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P~~~~~~~ai~~Al 304 (428)
T 3mqd_A 245 -------------RDGF-------VIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMAL 304 (428)
T ss_dssp -------------CCSB-------CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCSHHHHHHHHHHH
T ss_pred -------------CCCc-------ccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCHHHHHHHHHHHH
Confidence 2233 4899999999999999999999999999999998753321 13456789999999
Q ss_pred HHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHH
Q psy1213 358 ERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 358 ~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v 436 (472)
+ |++ +|||+||+|+++|. .+.++++++... |... ...+++++.+..+|||.||+|+.+++.++
T Consensus 305 ~--gl~-~dId~ve~HgtgT~~~D~~E~~al~~~-~~~~------------~~~~~v~s~K~~~GH~~gAsG~~~~i~~~ 368 (428)
T 3mqd_A 305 S--TVT-SKIDYINPHATSTPAGDAPEIEAIRQI-FGAG------------DVCPPIAATKSLTGHSLGATGVQEAIYSL 368 (428)
T ss_dssp T--TCC-SCCCEEECCCCSCHHHHHHHHHHHHHH-HCSG------------GGSCCBCCTHHHHCBCGGGHHHHHHHHHH
T ss_pred h--CCc-cccCEEEEeCCCCCCcCHHHHHHHHHH-hccc------------CCCceeecchhhhcccHHHHHHHHHHHHH
Confidence 9 999 99999999999995 466666665421 2210 11145556666689999999999999999
Q ss_pred HHHhhc----------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 437 NRLVRE----------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 437 ~qL~~~----------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++|+++ ..++.++++++.||.++++||++.+
T Consensus 369 ~~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~~ 427 (428)
T 3mqd_A 369 LMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427 (428)
T ss_dssp HHHHHTEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHhCCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeecC
Confidence 999864 1246778899999999999999865
No 26
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=5.7e-31 Score=271.86 Aligned_cols=272 Identities=16% Similarity=0.116 Sum_probs=202.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| +|++|+..+++ ..+.++.+++..+|
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 4678999999999999999999999 89998764432 13567889999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeeccc-CCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM-SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
+ ++|+++|+++|+|+++||++|+++|++| +|++||+|+|.+ +...+. .+. .
T Consensus 158 l--~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~-------~~~----------------~-- 209 (415)
T 1tqy_B 158 M--RGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWV-------SQI----------------A-- 209 (415)
T ss_dssp C--CSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHH-------HHH----------------T--
T ss_pred C--CCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHH-------HHH----------------h--
Confidence 9 4799999999999999999999999999 999999999983 321100 000 0
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~ 277 (472)
.+.+.. .+|... .++|+.
T Consensus 210 ------------------------------------------------------~~~ls~~~~~~~~-~~pfd~------ 228 (415)
T 1tqy_B 210 ------------------------------------------------------SGRISTATDPDRA-YLPFDE------ 228 (415)
T ss_dssp ------------------------------------------------------TSCBCCCSCGGGS-CCTTST------
T ss_pred ------------------------------------------------------ccCccCCCCCCCC-cCCCCC------
Confidence 000000 001110 012211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCcc--cccccHHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPKD--QLLLGPAYATP 354 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~~--~~~~~~~~a~~ 354 (472)
..+++.++|||+++||++.+.|++++. +++++|.|++...+.... +.. +...+++
T Consensus 229 ---------------------~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~-~~~~ai~ 286 (415)
T 1tqy_B 229 ---------------------RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA-GLERAIR 286 (415)
T ss_dssp ---------------------TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC-SHHHHHH
T ss_pred ---------------------CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH-HHHHHHH
Confidence 135566999999999999999999999 999999999987653221 112 6789999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|++++.. +.++++++... |++. .+| |+... ..+|||.||+|+.+++
T Consensus 287 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-~g~~---------~~~---v~s~K--~~~GH~~gAaG~~~~~ 351 (415)
T 1tqy_B 287 LALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRV-FGRE---------GVP---VTVPK--TTTGRLYSGGGPLDVV 351 (415)
T ss_dssp HHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHH-HCTT---------CSE---EECGG--GGTCBCGGGHHHHHHH
T ss_pred HHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHH-hCCC---------Cce---Eeccc--hhhccChHHHHHHHHH
Confidence 9999999999999999999999952 44445444421 3111 134 54332 2379999999999999
Q ss_pred HHHHHHhhc---------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVRE---------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~---------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++++|+++ ..+++++++++.||.++++||++.+
T Consensus 352 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 352 TALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp HHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred HHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 999999974 2357888999999999999999865
No 27
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.97 E-value=2.8e-31 Score=275.71 Aligned_cols=276 Identities=17% Similarity=0.170 Sum_probs=204.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCc-CccC----EEEEEeecCCC--------------------------CCChHHHHHHHHc
Q psy1213 70 MAHELARHSLIGILQKTGISK-DLID----YIVYGTVIQEV--------------------------KTSNIGREAALSA 118 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~-~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~l 118 (472)
...+|+++|+++||+|+|+++ ++|| +|++|+..++. ....++.+++..+
T Consensus 96 ~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 175 (438)
T 2iwz_A 96 SPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRY 175 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHh
Confidence 356799999999999999998 8888 69999865542 1235788999999
Q ss_pred CCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccC
Q psy1213 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIR 198 (472)
Q Consensus 119 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (472)
|+ ++|+++|+++|+|++.||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 176 gl--~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~------------------- 228 (438)
T 2iwz_A 176 KL--KGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCIS-PLSL-----AGFS------------------- 228 (438)
T ss_dssp TC--CSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH-------------------
T ss_pred CC--CCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcC-HHHH-----HHHH-------------------
Confidence 99 4699999999999999999999999999999999999997432 2110 0000
Q ss_pred CCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC-CccceeccceeeccCCCcc
Q psy1213 199 PDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRV 277 (472)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~-~~P~a~~~~~~~~de~~~~ 277 (472)
+.+.+.. .+|... .+||+.+
T Consensus 229 -----------------------------------------------------~~~~ls~~~~p~~~-~~pfd~~----- 249 (438)
T 2iwz_A 229 -----------------------------------------------------RARALSTNSDPKLA-CRPFHPK----- 249 (438)
T ss_dssp -----------------------------------------------------HTTCBCCCSCTTTS-CCTTCTT-----
T ss_pred -----------------------------------------------------hcCCcCCCCCCCcc-cccCCCC-----
Confidence 0000000 012111 1122211
Q ss_pred CCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHH
Q psy1213 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYAT 353 (472)
Q Consensus 278 ~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~ 353 (472)
.++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...++
T Consensus 250 ----------------------~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai 307 (438)
T 2iwz_A 250 ----------------------RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCM 307 (438)
T ss_dssp ----------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHH
T ss_pred ----------------------CCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHH
Confidence 23445999999999999999999999999999999987653211 1234567899
Q ss_pred HHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHH
Q psy1213 354 PQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 354 ~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v 432 (472)
++||++||++++|||++|+|++++.. +.+++++|... |.+. .++ +++++.+..+||+.+|+|+.++
T Consensus 308 ~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~-fg~~-------~~~-----~~v~s~K~~~GH~~gAaG~~~l 374 (438)
T 2iwz_A 308 AAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHL-FKDH-------AYA-----LAVSSTKGATGHLLGAAGAVEA 374 (438)
T ss_dssp HHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHH-HGGG-------GGT-----SEEECCHHHHCBCGGGHHHHHH
T ss_pred HHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHH-Hhcc-------CCC-----cceecchhhhcCCHHHHHHHHH
Confidence 99999999999999999999999974 55555555421 3221 122 4444444457999999999999
Q ss_pred HHHHHHHhhcc------------------------------CCcchhhhhccCcceeEEEEEeC
Q psy1213 433 VHAANRLVRED------------------------------GQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 433 ~e~v~qL~~~~------------------------------g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+++++||+++. .+++++++++.||.++++||++.
T Consensus 375 i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 375 AFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp HHHHHHHHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred HHHHHHHhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence 99999999752 35778889999999999999873
No 28
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.97 E-value=6.1e-31 Score=272.75 Aligned_cols=274 Identities=15% Similarity=0.130 Sum_probs=206.2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC--------------------------CCChHHHHHHHHcC
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV--------------------------KTSNIGREAALSAG 119 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~--------------------------~~~~~a~~ia~~lG 119 (472)
...+|+++|+++||+|+|+++++|| ++++++..++. ....++.+++..+|
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 3568999999999999999999999 68888765431 01246788999999
Q ss_pred CCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCC
Q psy1213 120 FSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRP 199 (472)
Q Consensus 120 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (472)
+ .+|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 172 l--~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-p~~~-----~~~~-------------------- 223 (430)
T 1ox0_A 172 A--NGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASIT-PFAI-----AGFQ-------------------- 223 (430)
T ss_dssp C--CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS-HHHH-----HHHH--------------------
T ss_pred C--CCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccC-HHHH-----HHHH--------------------
Confidence 9 4799999999999999999999999999999999999998532 1100 0000
Q ss_pred CCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC-CCccceeccceeeccCCCccC
Q psy1213 200 DFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~-~~~P~a~~~~~~~~de~~~~~ 278 (472)
+.+.+. ...|... .+||+.
T Consensus 224 ----------------------------------------------------~~~~ls~~~~p~~~-~~pFd~------- 243 (430)
T 1ox0_A 224 ----------------------------------------------------ALTALSTTEDPTRA-SIPFDK------- 243 (430)
T ss_dssp ----------------------------------------------------HTTCBCCCSSTTSS-SCTTBT-------
T ss_pred ----------------------------------------------------hCCCccCCCCCCCC-CCCCCC-------
Confidence 000000 0011111 012211
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..+++.++|||+++||++.+.|+++|.+++++|+|++...+.... ....+...+++
T Consensus 244 --------------------~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~ 303 (430)
T 1ox0_A 244 --------------------DRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIK 303 (430)
T ss_dssp --------------------TCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred --------------------CCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHH
Confidence 135566999999999999999999999999999999887652111 12345678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|++++.. +..+.+++... +++++| ||..++. +|||.||+|+.+++
T Consensus 304 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-----------~g~~~~---v~s~k~~--~GH~~gAaG~~~~i 367 (430)
T 1ox0_A 304 LALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAV-----------LGKEVP---VSSTKSF--TGHLLGAAGAVEAI 367 (430)
T ss_dssp HHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHH-----------HCSSSE---EECTHHH--HCBCGGGHHHHHHH
T ss_pred HHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHH-----------hCCCce---ecccccc--cccchhhHHHHHHH
Confidence 9999999999999999999999975 34444444310 123466 8888887 79999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
++++||+++. .+++++++++.||.++++||++.+
T Consensus 368 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~~ 428 (430)
T 1ox0_A 368 VTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWE 428 (430)
T ss_dssp HHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeecC
Confidence 9999999752 257888899999999999999864
No 29
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.2e-30 Score=268.53 Aligned_cols=271 Identities=18% Similarity=0.190 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCccCEEEEEeecCCCC--------------------------CChHHHHHHHHcCCC
Q psy1213 71 AHELARHSLIGILQKTGIS---KDLIDYIVYGTVIQEVK--------------------------TSNIGREAALSAGFS 121 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~---~~~Id~vi~g~~~~~~~--------------------------~~~~a~~ia~~lGl~ 121 (472)
..+|+++|+++||+|+|++ +++| .|++|+..+++. ...++.+++..+|+
T Consensus 99 ~~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl- 176 (434)
T 2gp6_A 99 LQRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHA- 176 (434)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcC-
Confidence 4689999999999999983 3334 588887655430 12467899999999
Q ss_pred CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCC
Q psy1213 122 DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDF 201 (472)
Q Consensus 122 ~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (472)
++|+++|+++|+|+++||++|+++|++|++|++||+|+|.++..... ..+. .
T Consensus 177 -~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------~~~~----------------~----- 228 (434)
T 2gp6_A 177 -KAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPI------AGFA----------------Q----- 228 (434)
T ss_dssp -CSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHH------HHHH----------------T-----
T ss_pred -CCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHH------HHHH----------------H-----
Confidence 48999999999999999999999999999999999999987541000 0000 0
Q ss_pred CCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcC-CCCC--CccceeccceeeccCCCccC
Q psy1213 202 FIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKG-YLTD--ILPIQVGDKTISKDNGVRVS 278 (472)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g-~~~~--~~P~a~~~~~~~~de~~~~~ 278 (472)
.+ .+.. .+|... .+||+.
T Consensus 229 ---------------------------------------------------~~~~ls~~~~~p~~~-~~pfd~------- 249 (434)
T 2gp6_A 229 ---------------------------------------------------MRIVMSTNNDDPAGA-CRPFDR------- 249 (434)
T ss_dssp ---------------------------------------------------TTSSCCCCTTCTTTS-CCSSBT-------
T ss_pred ---------------------------------------------------HHHHhcCCCCCCCCc-eecccc-------
Confidence 00 0000 011110 122221
Q ss_pred CHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHH
Q psy1213 279 TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATP 354 (472)
Q Consensus 279 t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~ 354 (472)
..++..++|||+++||++.+.|++++.+++++|+|++...+.... ....+...+++
T Consensus 250 --------------------~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~ 309 (434)
T 2gp6_A 250 --------------------DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAIT 309 (434)
T ss_dssp --------------------TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHH
T ss_pred --------------------cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHH
Confidence 134556999999999999999999999999999999987642111 12335678999
Q ss_pred HHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHH
Q psy1213 355 QVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 355 ~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~ 433 (472)
+||+++|++++|||++|+|.+.+.. +.+++++|+.. | +++ + +|++|++..+|||.||+|+.+++
T Consensus 310 ~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~-f----------g~~-~---~~v~s~k~~~GH~~gAaG~~~~i 374 (434)
T 2gp6_A 310 RAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNA-L----------GGN-R---PAVYAPKSALGHSVGAVGAVESI 374 (434)
T ss_dssp HHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHH-H----------TTC-C---CEECCTHHHHCBCTTTHHHHHHH
T ss_pred HHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHH-h----------ccC-C---CCcccchhhhcCchhhhHHHHHH
Confidence 9999999999999999999776643 56667666521 2 111 3 89999999999999999999999
Q ss_pred HHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEe
Q psy1213 434 HAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 434 e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
++++||+++. .+++++++++.||.++++||++
T Consensus 375 ~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 375 LTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp HHHHHHHHSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHhcCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 9999999862 2578888999999999999986
No 30
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.97 E-value=5.9e-31 Score=272.47 Aligned_cols=276 Identities=17% Similarity=0.171 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC---------------------------CCh-HHH----HH
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK---------------------------TSN-IGR----EA 114 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~---------------------------~~~-~a~----~i 114 (472)
..+|+++++++||+|+|+++++|| +|++|+..+++. .++ .+. ++
T Consensus 73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i 152 (424)
T 1tqy_A 73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence 567999999999999999999999 699998765320 011 134 89
Q ss_pred HHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhh
Q psy1213 115 ALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLL 194 (472)
Q Consensus 115 a~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (472)
+..+|+ ++|+++|+++|+|+++||++|+++|++|++|++||+|+|.+.. |... ..+.
T Consensus 153 a~~lgl--~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~~-----~~~~--------------- 209 (424)
T 1tqy_A 153 AWAVGA--EGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPIT-PIVV-----ACFD--------------- 209 (424)
T ss_dssp HHHHTC--CSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCS-HHHH-----HHHH---------------
T ss_pred HHhcCC--CCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCC-HHHH-----HHHH---------------
Confidence 999999 4799999999999999999999999999999999999998532 1100 0000
Q ss_pred hccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC--Cccceeccceeecc
Q psy1213 195 ATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD--ILPIQVGDKTISKD 272 (472)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~--~~P~a~~~~~~~~d 272 (472)
. .+.+.+ .+|... .+||+.+
T Consensus 210 ---------------------------------~------------------------~~~ls~~~~~p~~~-~rpfd~~ 231 (424)
T 1tqy_A 210 ---------------------------------A------------------------IRATTARNDDPEHA-SRPFDGT 231 (424)
T ss_dssp ---------------------------------H------------------------TTCBCCCCSCGGGC-CCTTBTT
T ss_pred ---------------------------------h------------------------hccccCCCCCCCCC-ccCCCCC
Confidence 0 000000 022221 1222211
Q ss_pred CCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----ccccc
Q psy1213 273 NGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLG 348 (472)
Q Consensus 273 e~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~ 348 (472)
.++..++|||+++||++.+.|+++|.+++++|+|++...+.... ....+
T Consensus 232 ---------------------------~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~ 284 (424)
T 1tqy_A 232 ---------------------------RDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGRE 284 (424)
T ss_dssp ---------------------------CCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHH
T ss_pred ---------------------------CCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHH
Confidence 35566999999999999999999999999999999987653211 12234
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAAT 427 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gas 427 (472)
...++++||+++|++++|||++|+|++++.. +.++++++... |.++ .+++| |+ +.+..+||+.+|+
T Consensus 285 ~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~-f~~~-------~~~~~---v~--s~k~~~GH~~~Aa 351 (424)
T 1tqy_A 285 MAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRA-LGEH-------ARRTP---VS--SIKSMVGHSLGAI 351 (424)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHH-TGGG-------GGGSC---EE--CTHHHHCBCTTTH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHH-hccc-------CCCCe---ee--ccccccccChhhh
Confidence 5789999999999999999999999999963 55555555421 3221 12234 43 3334479999999
Q ss_pred HHHHHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCC
Q psy1213 428 GVRLTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 428 G~~~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
|+.+++++++||+++. .+++++++++.||.++++||++.+
T Consensus 352 G~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 352 GSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp HHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred HHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEccccCCceEEEEEEccCC
Confidence 9999999999999752 367888999999999999999864
No 31
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.97 E-value=3.2e-30 Score=265.37 Aligned_cols=271 Identities=18% Similarity=0.185 Sum_probs=202.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCE-----EEEEeecCCC---------------------------CCChHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDY-----IVYGTVIQEV---------------------------KTSNIGREAALS 117 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~-----vi~g~~~~~~---------------------------~~~~~a~~ia~~ 117 (472)
...+|+++++++||+|+|+++++||. |++|+..++. ....++.+++..
T Consensus 70 ~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (406)
T 2vba_A 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHh
Confidence 36789999999999999999988885 9999876542 023567899999
Q ss_pred cCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhcc
Q psy1213 118 AGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATI 197 (472)
Q Consensus 118 lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (472)
+|+ .+|+++|+++|+|++.||++|+++|++|++|++||+|+|.++.. .. . . |.
T Consensus 150 lgl--~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~-~~----~-~-~~------------------ 202 (406)
T 2vba_A 150 FKI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MA----C-E-FD------------------ 202 (406)
T ss_dssp TTC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HH----H-H-HH------------------
T ss_pred ccC--CCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccCh-HH----H-H-Hh------------------
Confidence 999 47999999999999999999999999999999999999987531 00 0 0 00
Q ss_pred CCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC---CccceeccceeeccCC
Q psy1213 198 RPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNG 274 (472)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~---~~P~a~~~~~~~~de~ 274 (472)
+. |.+.. .+|... .+||+.+
T Consensus 203 ------------------------------~~------------------------~~ls~~~~~~p~~~-~~pfd~~-- 225 (406)
T 2vba_A 203 ------------------------------AM------------------------GALSTKYNDTPEKA-SRTYDAH-- 225 (406)
T ss_dssp ------------------------------HT------------------------TCBCCSCTTSGGGS-CCTTBTT--
T ss_pred ------------------------------hc------------------------cccccccCCCCccc-cCcCcCC--
Confidence 00 00000 012111 1233211
Q ss_pred CccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cccccHHHH
Q psy1213 275 VRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QLLLGPAYA 352 (472)
Q Consensus 275 ~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~~~~~~~a 352 (472)
.++..++|||+++||++.+.|+++|.+++++|+|++...+.... +...+...+
T Consensus 226 -------------------------~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~~~~~~~a 280 (406)
T 2vba_A 226 -------------------------RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRC 280 (406)
T ss_dssp -------------------------CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCCSHHHHHH
T ss_pred -------------------------CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCHHHHHHH
Confidence 24445899999999999999999999999999999987653211 113456889
Q ss_pred HHHHHHHcCCCcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHH
Q psy1213 353 TPQVLERAGLSLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVR 430 (472)
Q Consensus 353 ~~~Al~~Agl~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~ 430 (472)
+++||+++| +|||++|+|+++|.. +.+++++|... |.+ .++| | |+.++ +||+.+|+|+.
T Consensus 281 i~~al~~ag---~dId~ve~HgtgT~~gD~~E~~al~~~-fg~---------~~~~---v---~s~K~~~GH~~gAaG~~ 341 (406)
T 2vba_A 281 MKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAAIREV-FGD---------KSPA---I---SATKAMTGHSLGAAGVQ 341 (406)
T ss_dssp HHHHHTTCC---SCCCEEECCCCSCHHHHHHHHHHHHHH-HTT---------CCCE---E---ECTHHHHCBCGGGHHHH
T ss_pred HHHHHhhCC---CCccEEEeeCccCcccCHHHHHHHHHH-hCc---------CCCc---e---eCchhhhcccHHHHHHH
Confidence 999999999 999999999999974 66777776521 211 0122 3 44455 89999999999
Q ss_pred HHHHHHHHHhhcc---------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 431 LTVHAANRLVRED---------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 431 ~v~e~v~qL~~~~---------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+++++++||+++. .+++++++++.||.++++||++.+|
T Consensus 342 ~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~~~ 406 (406)
T 2vba_A 342 EAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKLKD 406 (406)
T ss_dssp HHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC--
T ss_pred HHHHHHHHHhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeCCC
Confidence 9999999999753 2467888999999999999998764
No 32
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.97 E-value=5.1e-30 Score=254.78 Aligned_cols=290 Identities=16% Similarity=0.108 Sum_probs=217.5
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.++++|+|++.++++.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~ 80 (313)
T 1zow_A 3 VGIKGFGAYAPEKIIDNAYFEQFLDTSDEWISK--MTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVAT 80 (313)
T ss_dssp EEEEEEEEECCSCEEEGGGGGGTSSCCHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred eEEEEEEEECCCccccHHHHHHhcCCCHHHHHH--hhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 4689999999999999988776432 446644 788888766567889999999999999999999999999999998
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..+++..++++..++..+|++ .+++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------- 146 (313)
T 1zow_A 81 ATGDMPFPTVANMLQERLGTG-KVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKIT------------- 146 (313)
T ss_dssp SSCSCSSSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGTC-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc-------------
Confidence 887766678899999999996 589999999999999999999999999999999999999865310
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
.
T Consensus 147 -------------------------------------------------------------------------------~ 147 (313)
T 1zow_A 147 -------------------------------------------------------------------------------D 147 (313)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE-EEEeEEecc
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY-LRDFVYVSQ 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~-I~g~~~~~~ 339 (472)
|+. . .++..++|||+|+||++.+. +.+++.. +.+.+...+
T Consensus 148 ~~d----------------~-------------------~~~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~ 188 (313)
T 1zow_A 148 LTD----------------R-------------------STAVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGK 188 (313)
T ss_dssp TTC----------------H-------------------HHHTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGG
T ss_pred ccc----------------c-------------------cceeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcC
Confidence 000 0 01223799999999987543 1111111 222221111
Q ss_pred C---Cc----ccc-c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccC
Q psy1213 340 D---PK----DQL-L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403 (472)
Q Consensus 340 ~---p~----~~~-~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~ 403 (472)
. |. ..+ . .....+++++|+++|++++|||+|++|.+++.......+.||
T Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg--------------- 253 (313)
T 1zow_A 189 HLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESARERLG--------------- 253 (313)
T ss_dssp GEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHHHHT---------------
T ss_pred eEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC---------------
Confidence 0 00 000 0 123578999999999999999999999999987666677887
Q ss_pred CCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 404 G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+++..+ +..+||+.+|++...+.+++++-+-+.+++.|..+++.|....++||+-
T Consensus 254 --~~~~~~~~~--~~~~Gh~~~as~~~~L~~~~~~~~~~~g~~vl~~~~G~G~t~~~~~l~~ 311 (313)
T 1zow_A 254 --ISKDKMSVS--VNKYGNTSAASIPLSIDQELKNGKLKDDDTIVLVGFGGGLTWGAMTIKW 311 (313)
T ss_dssp --CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --CCHHHHHHh--HhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 333333322 3468999999999999998877544567888888777666777788763
No 33
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.96 E-value=7.7e-29 Score=277.41 Aligned_cols=278 Identities=17% Similarity=0.192 Sum_probs=210.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCC------------------ChHHHHHHHHcCCCCCCcee
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVKT------------------SNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~------------------~~~a~~ia~~lGl~~~~~~~ 127 (472)
+..+|+++++++||+|+|+++++|| +|++|+..+++.. ..++.+++..+|+ ++|++
T Consensus 94 p~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 171 (915)
T 2qo3_A 94 PQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGL--EGPSI 171 (915)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTB--CSCEE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCC--CCCEE
Confidence 3567999999999999999999999 4999987666421 1367899999999 47999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++... .. ..+.
T Consensus 172 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~-~~-----~~~~---------------------------- 217 (915)
T 2qo3_A 172 SVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPG-VF-----VDFS---------------------------- 217 (915)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTH-HH-----HHHH----------------------------
T ss_pred EECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHH-HH-----HHHh----------------------------
Confidence 9999999999999999999999999999999999875411 00 0000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
+.+.+ .|... .++|+.+
T Consensus 218 --------------------------------------------~~~~l---s~~g~-~~~Fd~~--------------- 234 (915)
T 2qo3_A 218 --------------------------------------------RQRAL---AADGR-SKAFGAG--------------- 234 (915)
T ss_dssp --------------------------------------------TTTCB---CSSCC-CCTTBTT---------------
T ss_pred --------------------------------------------hhccc---CCCCC-cccccCC---------------
Confidence 00000 01000 1222211
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~~~~~a~~~Al~~Agl~ 363 (472)
.++..++||++++||++.+.|+++|.+++++|+|++...+.... +...+...++++||++||++
T Consensus 235 ------------adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~ 302 (915)
T 2qo3_A 235 ------------ADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLE 302 (915)
T ss_dssp ------------CCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCC
T ss_pred ------------CCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 24555999999999999999999999999999999987653211 11234578999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
++|||++|+|+++|.. +..+.++|... |.. ...++.| +|+++++..+||+.+|+|+.+++++++||+++
T Consensus 303 p~dId~ve~HgtgT~~gD~~E~~al~~~-f~~------~~~~~~~---~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~ 372 (915)
T 2qo3_A 303 PGDVDAVEAHGTGTALGDPIEANALLDT-YGR------DRDADRP---LWLGSVKSNIGHTQAAAGVTGLLKVVLALRNG 372 (915)
T ss_dssp GGGCCEEECCCCCCTTTHHHHHHHHHHH-TSS------SCCTTSC---EEEECTHHHHCBCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHCcEEEecCCCCccCCHHHHHHHHHH-hcc------ccCCCCc---ccccCcccceeCCccccchHHHHHHHHHHhcC
Confidence 9999999999999964 55555544311 110 0112234 89999999999999999999999999999874
Q ss_pred c-----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 443 D-----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 443 ~-----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
. .+++++++++.||.|+++||+..|.
T Consensus 373 ~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 433 (915)
T 2qo3_A 373 ELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPE 433 (915)
T ss_dssp EECCCSSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred CCCCCCCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeeccc
Confidence 1 1467888999999999999998764
No 34
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.96 E-value=2.1e-29 Score=249.79 Aligned_cols=284 Identities=15% Similarity=0.075 Sum_probs=212.2
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.+++.|+|++.++++.+.+... +.||.. ++++.+|+... +.+..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~-~~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~ 79 (309)
T 2ebd_A 3 TKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITT--RTGIKERRIAK-EETITYMATQAAKEALREANLSPEELDLIILAT 79 (309)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HHCCCEEEECS-SCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred eEEEEEEEECCCceEcHHHHHHHcCCCHHHHHH--HhCceeeeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 5699999999999998887765532 334433 56666554322 378999999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..++...++++..++..+|++ ..++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 80 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------- 145 (309)
T 2ebd_A 80 LTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAV------------- 145 (309)
T ss_dssp SSCSSSSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGTC-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccccccc-------------
Confidence 887766678999999999996 469999999999999999999999999999999999999864210
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
+
T Consensus 146 -------------------------------------------------------------------------------~ 146 (309)
T 2ebd_A 146 -------------------------------------------------------------------------------D 146 (309)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc-
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ- 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~- 339 (472)
|. + ..++...+|||+|+||++.+.++ .|.+....++
T Consensus 147 ~~---------~--------------------------~~~~~~~gdGaaA~vL~~~~~~~--------~i~~~~~~~~g 183 (309)
T 2ebd_A 147 WE---------D--------------------------RSTCVLFGDGAGAVVVTRSEDKS--------DILATRMYAEG 183 (309)
T ss_dssp TT---------C--------------------------TTTTTTBCEEEEEEEEEECSSSC--------EEEEEEEEECG
T ss_pred cc---------c--------------------------hhhccccccccEEEEEEecCCCC--------ceeEEEEEecC
Confidence 00 0 01234489999999999765321 1233222111
Q ss_pred -------CCc-cc-ccc----------cHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCC
Q psy1213 340 -------DPK-DQ-LLL----------GPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 340 -------~p~-~~-~~~----------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~ 400 (472)
.|. .. ... ....+++++|+++|++++|||++++|++++.......+.|| +
T Consensus 184 ~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~~~~~~~lg---~-------- 252 (309)
T 2ebd_A 184 SLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLN---I-------- 252 (309)
T ss_dssp GGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHHTT---C--------
T ss_pred CccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHhC---C--------
Confidence 010 00 001 23678999999999999999999999999986666678888 2
Q ss_pred ccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 401 ~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+.+++..+ +..+||+.+|++...+.+++++=+-+.|++.|..+++.|....+++|+
T Consensus 253 ------~~~~~~~~--~~~~Gh~~~As~~~~L~~~~~~g~~~~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 253 ------PKEKVFVN--IQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp ------CGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------CHHHhhhh--HhhhcchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEE
Confidence 33333222 346899999999999999988643346788888777766666777775
No 35
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.96 E-value=1.1e-28 Score=276.19 Aligned_cols=277 Identities=21% Similarity=0.185 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCCC-------------------ChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEVKT-------------------SNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~~-------------------~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|+++++++||+|+|+++++|| +|++|+...++.. ..++.+++..+|+ ++|++
T Consensus 116 ~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~Gps~ 193 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGL--EGPAM 193 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCC--CCCeE
Confidence 456999999999999999999998 4899987766431 1357789999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++...... .+. .
T Consensus 194 tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~------~~~----------------~----------- 240 (917)
T 2hg4_A 194 TVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT------EFR----------------S----------- 240 (917)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHH------HHT----------------T-----------
T ss_pred eecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhH------hhh----------------h-----------
Confidence 9999999999999999999999999999999999876421100 000 0
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
.|.+ .|... .++|+
T Consensus 241 ---------------------------------------------~~~l---s~~g~-~~pFd----------------- 254 (917)
T 2hg4_A 241 ---------------------------------------------QGGL---AADGR-CKPFS----------------- 254 (917)
T ss_dssp ---------------------------------------------SSCB---CTTSC-CCTTB-----------------
T ss_pred ---------------------------------------------ccCc---CCccc-cCccc-----------------
Confidence 0000 01000 01221
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCccc----ccccHHHHHHHHHHHcCCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ----LLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~~----~~~~~~~a~~~Al~~Agl~ 363 (472)
+..|++.++||++++||++.+.|+++|.+++++|+|++...+..... ...+...++++||++||++
T Consensus 255 ----------~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~ 324 (917)
T 2hg4_A 255 ----------KAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVR 324 (917)
T ss_dssp ----------TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCC
T ss_pred ----------ccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 12466679999999999999999999999999999999876643211 1223468999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhc
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~ 442 (472)
++|||++|+|+++|.. +.+++++|... |. .+ ..++.| +|+++++..+||+.+|+|+..+++++++|+++
T Consensus 325 p~dId~veaHgtgT~~gD~~E~~al~~~-fg---~~---~~~~~~---~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~ 394 (917)
T 2hg4_A 325 AGDVDYVEAHGTGTRLGDPIEVHALLST-YG---AE---RDPDDP---LWIGSVKSNIGHTQAAAGVAGVMKAVLALRHG 394 (917)
T ss_dssp GGGCCEEECCCCCCTTHHHHHHHHHHTT-TT---TS---SCTTSC---CEEECTHHHHCBCGGGTTHHHHHHHHHHHHHT
T ss_pred HHHCCEEeeccCCCccCcHHHHHHHHHH-hc---cc---cCCCCc---eeccCcccceecchhhhHHHHHHHHHHHHhcC
Confidence 9999999999999963 55666666421 21 11 111224 88989999999999999999999999999874
Q ss_pred c-----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 443 D-----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 443 ~-----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
. .+++++++++.||.|+++||+..|.
T Consensus 395 ~ipp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 455 (917)
T 2hg4_A 395 EMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPE 455 (917)
T ss_dssp EECCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred CcCCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCCc
Confidence 1 1567888999999999999998764
No 36
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=99.96 E-value=3.1e-29 Score=250.20 Aligned_cols=288 Identities=16% Similarity=0.105 Sum_probs=216.8
Q ss_pred eeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEee
Q psy1213 24 SLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTV 101 (472)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~ 101 (472)
.|.+++.|+|++.++|+.+.+... +.||.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.|++++.
T Consensus 3 ~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~ 80 (322)
T 1ub7_A 3 GILALGAYVPERVMTNADFEAYLDTSDEWIVT--RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATN 80 (322)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECS
T ss_pred EEEEEEEECCCceecHHHHHHHhCCCHHHHHH--hcCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 589999999999999988776532 456644 6788776544457899999999999999999999999999999988
Q ss_pred cCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhh
Q psy1213 102 IQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRA 181 (472)
Q Consensus 102 ~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~ 181 (472)
.++...++++..++..+|+ ++++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~-------------- 144 (322)
T 1ub7_A 81 TPDALFPDTAALVQARFGL--KAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKII-------------- 144 (322)
T ss_dssp SCSEEESCHHHHHHHHTTC--CCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTS--------------
T ss_pred CCCCCCCcHHHHHHHHhCC--CCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcccc--------------
Confidence 7766567789999999999 589999999999999999999999999999999999999865210
Q ss_pred ccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCcc
Q psy1213 182 NKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILP 261 (472)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P 261 (472)
+|
T Consensus 145 ------------------------------------------------------------------------------~~ 146 (322)
T 1ub7_A 145 ------------------------------------------------------------------------------DW 146 (322)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------Ch
Confidence 00
Q ss_pred ceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEE-EEeEEeccC
Q psy1213 262 IQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYL-RDFVYVSQD 340 (472)
Q Consensus 262 ~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I-~g~~~~~~~ 340 (472)
+. ..++...+|||+|+||++.+. +..++..+ .+.+...+.
T Consensus 147 ~d-----------------------------------~~~~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~ 187 (322)
T 1ub7_A 147 ND-----------------------------------RATAVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKE 187 (322)
T ss_dssp TC-----------------------------------HHHHTTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTT
T ss_pred hh-----------------------------------cccceeeccccEEEEEEecCC----CCceeEEEEEEecCCCCe
Confidence 00 001122799999999987643 11122222 222211110
Q ss_pred ----------Cccc------c--c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhh
Q psy1213 341 ----------PKDQ------L--L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394 (472)
Q Consensus 341 ----------p~~~------~--~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~ 394 (472)
|... . + .....+++++|+++|++++|||+++.|.+++...-...+.||
T Consensus 188 ~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~~~~lg------ 261 (322)
T 1ub7_A 188 LYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAARERLG------ 261 (322)
T ss_dssp EEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHHHHHHHHTTT------
T ss_pred EEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC------
Confidence 2110 0 0 123578999999999999999999999999876555567777
Q ss_pred hhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 395 ~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+++..+ +..+||+.+|++...+.+++++=+-+.+++.|..+++.|+...++||+.
T Consensus 262 -----------~~~~~~~~~--~~~~Gh~~~As~~~~l~~~l~~g~~~~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 262 -----------LPWERVAVN--VDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp -----------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------CCHHHHHHH--HHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEChhheeEEEEEEe
Confidence 344444322 3458999999999999888776444567899999898889999999975
No 37
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=99.96 E-value=3.2e-29 Score=251.34 Aligned_cols=293 Identities=15% Similarity=0.089 Sum_probs=218.1
Q ss_pred cccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
+.++.|.+++.|+|++.++++.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|+
T Consensus 10 m~~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi 87 (335)
T 1u6e_A 10 ARSVGLLSVGAYRPERVVTNDEICQHIDSSDEWIYT--RTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVI 87 (335)
T ss_dssp CSCEEEEEEEEECCSEEEEHHHHTTSSSCCHHHHHH--HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred CCceEEEEEEEECCCceecHHHHHHHhCCCHHHHHH--hcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3556799999999999999987776543 456644 788887765556789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHH
Q psy1213 98 YGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSL 177 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~ 177 (472)
+++..+++..+.++..++..+|++ ++++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 88 ~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~---------- 156 (335)
T 1u6e_A 88 VTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPTI---------- 156 (335)
T ss_dssp EECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGGC----------
T ss_pred EEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccccc----------
Confidence 999888776788999999999996 689999999999999999999999999999999999999875210
Q ss_pred HHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCC
Q psy1213 178 LLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT 257 (472)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~ 257 (472)
T Consensus 157 -------------------------------------------------------------------------------- 156 (335)
T 1u6e_A 157 -------------------------------------------------------------------------------- 156 (335)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEE-EeEE
Q psy1213 258 DILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR-DFVY 336 (472)
Q Consensus 258 ~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~-g~~~ 336 (472)
.|+ + ..+|...+|||+|+||++.+. .+ ++..+. +.+.
T Consensus 157 --~~~-------d----------------------------~~~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~ 194 (335)
T 1u6e_A 157 --DMY-------D----------------------------RGNCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGE 194 (335)
T ss_dssp --CTT-------C----------------------------TTTTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGG
T ss_pred --Ccc-------c----------------------------cccceEeccccEEEEEEecCC---CC--eeEEEEEEcCC
Confidence 000 0 013445899999999987542 12 122222 2211
Q ss_pred ecc-------------CCc-----ccc-c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCc
Q psy1213 337 VSQ-------------DPK-----DQL-L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDS 389 (472)
Q Consensus 337 ~~~-------------~p~-----~~~-~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~ 389 (472)
..+ .|. ..+ + .....+++++|+++|++++|||++++|++++.......+.||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~~~~lg- 273 (335)
T 1u6e_A 195 QADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQ- 273 (335)
T ss_dssp GGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHHHHHHT-
T ss_pred cccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcC-
Confidence 100 010 000 0 123568899999999999999999999999988777888998
Q ss_pred hhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 390 EWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 390 ~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+++++ ++..+ +--+||+.+|+....+.++..+-+-+.+++.|..+++.|+...++||+.
T Consensus 274 --~~~~~-------------~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 274 --LRPDA-------------VVAND--IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp --CCTTC-------------EECCT--HHHHCBCGGGHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --CCchh-------------hhhhh--hhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEEe
Confidence 43321 23222 2448999999987666555554333457888888777777778888875
No 38
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.95 E-value=1.4e-27 Score=268.20 Aligned_cols=270 Identities=17% Similarity=0.191 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCC-------------------CCChHHHHHHHHcCCCCCCcee
Q psy1213 71 AHELARHSLIGILQKTGISKDLID----YIVYGTVIQEV-------------------KTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~-------------------~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
...|+++++++||+|+|++++++| ++++|+...++ ..+.++.+++..+|+ ++|++
T Consensus 80 ~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl--~GPs~ 157 (965)
T 3hhd_A 80 QLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDF--RGPSI 157 (965)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCC--CCCee
Confidence 345999999999999999999999 78998765542 124578899999999 57999
Q ss_pred eecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcc
Q psy1213 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELP 207 (472)
Q Consensus 128 ~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (472)
+|+++|+|++.||++|++.|++|++|++||+|+|.++...... .+.
T Consensus 158 tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~------~~~---------------------------- 203 (965)
T 3hhd_A 158 ALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSV------QFL---------------------------- 203 (965)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHH------HHH----------------------------
T ss_pred eecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHH------HHH----------------------------
Confidence 9999999999999999999999999999999999876411000 000
Q ss_pred cccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCC
Q psy1213 208 AVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLK 287 (472)
Q Consensus 208 ~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~ 287 (472)
+.+.+ .|... .++|+.+
T Consensus 204 --------------------------------------------~~~~l---s~~g~-~~~Fd~~--------------- 220 (965)
T 3hhd_A 204 --------------------------------------------RLGML---SPEGT-CKAFDTA--------------- 220 (965)
T ss_dssp --------------------------------------------HHTCB---CTTCC-CCTTBTT---------------
T ss_pred --------------------------------------------hccCc---CCCCc-cccchhc---------------
Confidence 00000 01100 1222211
Q ss_pred CcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc-----cccccHHHHHHHHHHHcCC
Q psy1213 288 PAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD-----QLLLGPAYATPQVLERAGL 362 (472)
Q Consensus 288 p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~-----~~~~~~~~a~~~Al~~Agl 362 (472)
.+|.+ .+||++++||++.+.|+ +++++|+|++...+.... +...+...++++||++||+
T Consensus 221 -----adG~~-------~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl 284 (965)
T 3hhd_A 221 -----GNGYC-------RSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGV 284 (965)
T ss_dssp -----CCSBC-------BBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTC
T ss_pred -----cCCcc-------ccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCC
Confidence 23444 79999999999998885 378999999998764321 1122357899999999999
Q ss_pred CcCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHh
Q psy1213 363 SLSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLV 440 (472)
Q Consensus 363 ~~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~ 440 (472)
+++|||++|+|+++|.. +.++++++... |++.. . -| +.+ |+.++ +||+.+|+|+..+++++++|+
T Consensus 285 ~p~dIdyvEaHgTgT~~gD~~E~~Al~~~-f~~~~------~--~~---~~v-gs~Ks~iGH~~~AaG~~~lik~~l~l~ 351 (965)
T 3hhd_A 285 APESFEYIEAHGTGTKVGDPQELNGITRA-LCATR------Q--EP---LLI-GSTKSNMGHPEPASGLAALAKVLLSLE 351 (965)
T ss_dssp CGGGEEEEECCCCCCTTHHHHHHHHHHHH-HCSSC------S--SC---EEE-ECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred CHHHhccccccCCCCCCCCHHHHHHHHHH-hcccC------C--Cc---eee-eccccccccchhhhhHHHHHHHHHHHh
Confidence 99999999999999953 56666666421 33211 0 12 444 45555 699999999999999999998
Q ss_pred hcc--------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 441 RED--------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 441 ~~~--------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
++. .++.++++++.||.|+++||+..+.
T Consensus 352 ~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~~ 411 (965)
T 3hhd_A 352 HGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNTQ 411 (965)
T ss_dssp HTEECCCSSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECCC
T ss_pred cCCcCCccCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccCCc
Confidence 751 1245678899999999999998654
No 39
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=99.94 E-value=2.2e-27 Score=238.52 Aligned_cols=291 Identities=15% Similarity=0.059 Sum_probs=217.4
Q ss_pred ccceeeeeecccCCCCcccccccccC--CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG--KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.|++.|+|++.++++.+.+.. .+.||.. ++++.+|+...++++..+|+.+|+++||+++|+++++||.|++
T Consensus 10 ~~~~I~gig~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~ 87 (339)
T 1mzj_A 10 RFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIET--RTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVV 87 (339)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHTTTSSCCHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CceEEEEEEEeCCCccccHHHHHHHhCCCHHHHHH--hcCceEEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 45679999999999999998887655 2456644 7788776544457899999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++..+++..++++..++..+|++ .+++++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 88 gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~----------- 155 (339)
T 1mzj_A 88 STMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMTDVI----------- 155 (339)
T ss_dssp ECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGGGGS-----------
T ss_pred EecCCCCCCChHHHHHHHHhCCC-CccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccccccc-----------
Confidence 99888776678999999999996 489999999999999999999999999999999999999864210
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 156 -------------------------------------------------------------------------------- 155 (339)
T 1mzj_A 156 -------------------------------------------------------------------------------- 155 (339)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE-EEEeEEe
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY-LRDFVYV 337 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~-I~g~~~~ 337 (472)
.|. | + .++...+|||+|+||.+.+. ..++.. +.+.+..
T Consensus 156 -~~~---------d--------------------~------~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~ 194 (339)
T 1mzj_A 156 -DLA---------D--------------------R------SLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTG 194 (339)
T ss_dssp -CSS---------C--------------------T------TTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGG
T ss_pred -Ccc---------c--------------------c------ccceEeccCceEEEEEecCC-----CCeEEEEEEEcCCC
Confidence 000 0 0 01223799999999987542 122222 2232221
Q ss_pred cc----C---Ccc---------cc---c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCch
Q psy1213 338 SQ----D---PKD---------QL---L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390 (472)
Q Consensus 338 ~~----~---p~~---------~~---~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~ 390 (472)
.+ . |.. .. + .....+++++|+++|++++|||+|..|...+...-...+.||
T Consensus 195 ~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg-- 272 (339)
T 1mzj_A 195 LGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLG-- 272 (339)
T ss_dssp GGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHT--
T ss_pred CCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhC--
Confidence 11 0 110 00 0 123568899999999999999999999999875545567777
Q ss_pred hhhhhhcCCCccCCCCCCC-CcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 391 WFAKNYMGRSSKVGVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 391 ~~~~~g~g~~~~~G~~p~~-~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
+|.+ ++.. .+--+||..+|++...+.+++.+=+-+.|++.|..+++.|....+++|+.
T Consensus 273 ---------------~~~~~~~~~--~~~~~Gn~~sAs~~~~L~~~~~~g~~~~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 273 ---------------VPEHVVVSR--DAEDTGNTSSASVALALDRLVRSGAVPGGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp ---------------CCTTSEECC--THHHHCBCTTHHHHHHHHHHHHHTSSCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred ---------------CCccceeee--hhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 4544 4431 13358999999999998888776444567888888888777778888875
No 40
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=99.94 E-value=5.2e-27 Score=235.25 Aligned_cols=286 Identities=17% Similarity=0.079 Sum_probs=212.9
Q ss_pred cceeeeeecccCCCCccccccccc-----CC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccC
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKT-----GK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLID 94 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~-----~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id 94 (472)
++.|.|++.|+|++.++|+.+.+. .. +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~~~~i~~--rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id 88 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETSDEWIVA--RTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSID 88 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC---CCCCHHHHHH--HHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCC
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccccCCCCHHHhHH--hcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 577999999999999999887765 22 456755 899998776667899999999999999999999999999
Q ss_pred EEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhh
Q psy1213 95 YIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKM 174 (472)
Q Consensus 95 ~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~ 174 (472)
.|++++..+++..+..+..++..+|++.++++++++.+|+|+++||..|+++|++|.++++||+|+|.+|....
T Consensus 89 ~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~------ 162 (333)
T 4dfe_A 89 LIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRILD------ 162 (333)
T ss_dssp EEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGCC------
T ss_pred EEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccccC------
Confidence 99999998877778899999999999657999999999999999999999999999999999999998753100
Q ss_pred HHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcC
Q psy1213 175 RSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKG 254 (472)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g 254 (472)
T Consensus 163 -------------------------------------------------------------------------------- 162 (333)
T 4dfe_A 163 -------------------------------------------------------------------------------- 162 (333)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEe
Q psy1213 255 YLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334 (472)
Q Consensus 255 ~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~ 334 (472)
+. | + ..|...+|||+|+||.+.+. + .|.++
T Consensus 163 ------~~---------d--------------------~------~~~~lfGDGA~A~vl~~~~~-------~--~i~~~ 192 (333)
T 4dfe_A 163 ------FK---------D--------------------R------TTCVLFGDGAGAVILQASDE-------P--GVLAS 192 (333)
T ss_dssp ------TT---------C--------------------T------TTTTTBCEEEEEEEEEEESS-------C--SEEEE
T ss_pred ------cc---------c--------------------c------cceeeeccccEEEEEEEcCC-------C--CeEEE
Confidence 00 0 0 12334799999999987541 1 12221
Q ss_pred EEecc--------CCc-----------cccc----------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHH
Q psy1213 335 VYVSQ--------DPK-----------DQLL----------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLK 385 (472)
Q Consensus 335 ~~~~~--------~p~-----------~~~~----------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~e 385 (472)
...++ .|. .... .....+++++|+++|++++|||+|.+|-..........+
T Consensus 193 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i~~~~~~ 272 (333)
T 4dfe_A 193 ALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCR 272 (333)
T ss_dssp EEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHHHH
T ss_pred EEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHH
Confidence 11110 000 0000 112467899999999999999999999999876666677
Q ss_pred hcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 386 AMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 386 alg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
.|| +|.+++..+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.++||+
T Consensus 273 ~lg-----------------l~~~~~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 273 KLG-----------------LPQERMIVT--VGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp HTT-----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred HhC-----------------CCHHHhhhh--HHhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEE
Confidence 888 566555442 234799998887777777665422245677777655544444566664
No 41
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.94 E-value=2.5e-27 Score=235.85 Aligned_cols=288 Identities=17% Similarity=0.102 Sum_probs=211.6
Q ss_pred ceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+.|.+++.|+|++.++++.+.+... +.||.. ++++.+|+...++.+..+|+.+|+++||+++|+++++||.|++++
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~ 80 (317)
T 1hnj_A 3 TKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVT--RTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVAT 80 (317)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTSSCCHHHHHH--HHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred cEEEEEEEeCCCceecHHHHHHHhCCCHHHHHH--HhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 5699999999999999987775432 445543 677776654446789999999999999999999999999999999
Q ss_pred ecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHh
Q psy1213 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLR 180 (472)
Q Consensus 101 ~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~ 180 (472)
..+++..+.++..++..+|++ .+|+++++++|+|++.||..|+++|++|.+|++||+|+|.++...
T Consensus 81 ~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~~------------- 146 (317)
T 1hnj_A 81 TSATHAFPSAACQIQSMLGIK-GCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTC------------- 146 (317)
T ss_dssp SCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHHHS-------------
T ss_pred CCCCCCCCcHHHHHHHHhCCC-CCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-------------
Confidence 888766678999999999996 489999999999999999999999999999999999999854200
Q ss_pred hccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCc
Q psy1213 181 ANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDIL 260 (472)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~ 260 (472)
.
T Consensus 147 -------------------------------------------------------------------------------~ 147 (317)
T 1hnj_A 147 -------------------------------------------------------------------------------D 147 (317)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEE-eEEecc
Q psy1213 261 PIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRD-FVYVSQ 339 (472)
Q Consensus 261 P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g-~~~~~~ 339 (472)
|. | . .++...+|||+|+||.+.+. ..+++.+.+ .+...+
T Consensus 148 ~~---------d-------~-------------------~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~ 187 (317)
T 1hnj_A 148 PT---------D-------R-------------------GTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGE 187 (317)
T ss_dssp TT---------C-------H-------------------HHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGG
T ss_pred ch---------h-------c-------------------ccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCC
Confidence 00 0 0 00112799999999987542 123344433 221111
Q ss_pred ---CCcc----------cccc----------cHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhh
Q psy1213 340 ---DPKD----------QLLL----------GPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396 (472)
Q Consensus 340 ---~p~~----------~~~~----------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g 396 (472)
-|.. .... ....+++++|+++|++++|||+|+.|.+.+...-...+.||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg-------- 259 (317)
T 1hnj_A 188 LLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLG-------- 259 (317)
T ss_dssp GEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHHHHHHHHHTT--------
T ss_pred eEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC--------
Confidence 0110 0011 23578899999999999999999999999876555567777
Q ss_pred cCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 397 ~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++.. -+--+||..+|++...+.+++.+=+-+.|++.|..+++.|..-.+++|+
T Consensus 260 ---------~~~~~~~~--~~~~~Gn~~~As~~~~L~~~~~~~~~~~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 260 ---------MSMDNVVV--TLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ---------CCGGGBCC--CHHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------CCHHHhHh--hHhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhheeEEEEEE
Confidence 34444432 1234899999999999888876533345778888766655555667765
No 42
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=99.94 E-value=5e-27 Score=235.19 Aligned_cols=290 Identities=18% Similarity=0.153 Sum_probs=213.2
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+... +++..+|+.+|+++||+++|+ ++||.|+++
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~-~~~~~~la~~Aa~~al~~ag~--~~id~vi~~ 79 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELDTSDAWISS--RTGVRQRHIAG-DLGSGDLALRAASAALASAGL--ERVDAVVLA 79 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTTCCHHHHHH--HHCCCEEECCT-TCCHHHHHHHHHHHHHHHHTC--SCCSEEEEE
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhCCCHHHHHH--hhCceEEEecC-CCCHHHHHHHHHHHHHHhCCc--ccCCEEEEE
Confidence 35699999999999999987776543 456644 67777765332 378999999999999999999 899999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHH
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLL 179 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~ 179 (472)
+..++...++++..++..+|++ .+++++++++|+|+++||..|.++|++|.+|++||+|+|.++...
T Consensus 80 t~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~~~------------ 146 (331)
T 2x3e_A 80 TSTGDFCCPATAPRVAARLGLV-GALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSHTL------------ 146 (331)
T ss_dssp CSSCSEEESCSHHHHHHHTTCT-TSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS------------
T ss_pred eCCCCCCCChHHHHHHHHhCCC-CCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccccCC------------
Confidence 8887765677899999999996 589999999999999999999999999999999999999864210
Q ss_pred hhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCC
Q psy1213 180 RANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDI 259 (472)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~ 259 (472)
++. .+.
T Consensus 147 -------------------------------~~~------------------d~~------------------------- 152 (331)
T 2x3e_A 147 -------------------------------DPA------------------DRS------------------------- 152 (331)
T ss_dssp -------------------------------CTT------------------CHH-------------------------
T ss_pred -------------------------------Ccc------------------ccc-------------------------
Confidence 000 000
Q ss_pred ccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc
Q psy1213 260 LPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ 339 (472)
Q Consensus 260 ~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~ 339 (472)
.+.+ .+|||+|+||++.+.| .+. .|.+....++
T Consensus 153 ----------------------------------~~~~-------~GdGA~A~vL~~~~~a--~~~----~i~~~~~~~d 185 (331)
T 2x3e_A 153 ----------------------------------TRAL-------FGDGAGAVVLRAGDAE--EEG----ALLAFDLGSD 185 (331)
T ss_dssp ----------------------------------HHHH-------BCCEEEEEEEEEECTT--STT----BEEEEEEEEC
T ss_pred ----------------------------------ccee-------eccccEEEEEEecCCC--CCC----ceEEEEEEEc
Confidence 0112 7999999999876533 111 1222222111
Q ss_pred ----C----Cc------------cc-c--c--------ccHHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcC
Q psy1213 340 ----D----PK------------DQ-L--L--------LGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388 (472)
Q Consensus 340 ----~----p~------------~~-~--~--------~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg 388 (472)
+ |. .. . + .....+++++|+++|++++|||+|..|...+...-...+.||
T Consensus 186 g~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg 265 (331)
T 2x3e_A 186 GHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLD 265 (331)
T ss_dssp GGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHT
T ss_pred CCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC
Confidence 0 00 00 0 0 123568899999999999999999999999976556667787
Q ss_pred chhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 389 ~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+|.+++..+ +--+||..+|+....+.+++.+-+-+.|++.|..+++.|....+++|+- |+
T Consensus 266 -----------------~~~~~~~~~--~~~~Gnt~sAs~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~~l~~-~~ 325 (331)
T 2x3e_A 266 -----------------LPVERVVSN--IAEVGNTVAASIPLALAHGLRQGILRDGGNMVLTGFGAGLTWGSVALRW-PK 325 (331)
T ss_dssp -----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTCSCTTCEEEEEEEETTTEEEEEEEEC-CC
T ss_pred -----------------CCHHHHhhh--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEeHHhhheeeEEEE-CC
Confidence 344433322 2358999999999999888776555667888888777666677777754 44
Q ss_pred CC
Q psy1213 469 AT 470 (472)
Q Consensus 469 ~~ 470 (472)
.+
T Consensus 326 ~~ 327 (331)
T 2x3e_A 326 IV 327 (331)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 43
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=99.94 E-value=2.5e-26 Score=229.26 Aligned_cols=286 Identities=15% Similarity=0.077 Sum_probs=214.3
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
-|.+|.|++.|+|++.++|+.+.+... +.||.. +|++.+|+...+++++.+|+.+|+++||+++|+++++||.|++
T Consensus 8 ~~~~~~~~g~ylP~~~v~n~~l~~~~~~~~~~i~~--~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~ 85 (323)
T 3il3_A 8 MNSRILSTGSYLPSHIRTNADLEKMVDTSDEWIVT--RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIV 85 (323)
T ss_dssp CEECCCEEEEECCSCEEEHHHHHTTSSCCHHHHHH--HTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEE
T ss_pred ccCceeEEEEECCCceEcHHHHHHHhCCCHHHHHH--hcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 566799999999999999998887653 557765 8999987766668999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++.++++..++.+..++..+|++ ++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|....
T Consensus 86 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---------- 154 (323)
T 3il3_A 86 ATTSHSHAYPSAACQVQGLLNID-DAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKLD---------- 154 (323)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTCS-SCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSCC----------
T ss_pred EeCCCCCCCccHHHHHHHHhCCC-CccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccccC----------
Confidence 99888776788999999999996 7999999999999999999999999999999999999999764210
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
T Consensus 155 -------------------------------------------------------------------------------- 154 (323)
T 3il3_A 155 -------------------------------------------------------------------------------- 154 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
+ .| + ..|...+|||+|+||...+ . + .|.++...+
T Consensus 155 --~---------~d--------------------~------~~~~lfGDGA~A~vl~~~~---~----~--~i~~~~~~s 188 (323)
T 3il3_A 155 --E---------TD--------------------R------STVVLFGDGAGAVILEASE---Q----E--GIISTHLHA 188 (323)
T ss_dssp --T---------TC--------------------T------TTTTTBCEEEEEEEEEEES---S----C--CEEEEEEEE
T ss_pred --c---------cc--------------------c------ccccccccceEEEEEEEcC---C----C--CeEEEEEEE
Confidence 0 00 0 0123379999999998753 1 1 122211111
Q ss_pred c--------CCc--------ccc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchh
Q psy1213 339 Q--------DPK--------DQL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEW 391 (472)
Q Consensus 339 ~--------~p~--------~~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~ 391 (472)
+ -|. ... ..+ ...+++++|+++|++++|||+|=+|-..........+.||
T Consensus 189 ~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lg--- 265 (323)
T 3il3_A 189 SADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLRIITATAKKLE--- 265 (323)
T ss_dssp CCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHHHHHHHHHHTT---
T ss_pred cCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcC---
Confidence 0 010 000 011 1356789999999999999999999999876666778888
Q ss_pred hhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 392 FAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 392 ~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++-.+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.++||+
T Consensus 266 --------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 266 --------------MDMSQVVVT--LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp --------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHTTSSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------cCHHHhhcc--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeEEEEEE
Confidence 566555432 334799988887777777765433345677777655544445566664
No 44
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.94 E-value=1.3e-26 Score=233.49 Aligned_cols=307 Identities=14% Similarity=0.075 Sum_probs=219.4
Q ss_pred cccceeeeeecccCCCCccccccccc---------CCceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCc
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKT---------GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISK 90 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~---------~~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~ 90 (472)
++++.|.++++|+|++.++|+++.+. ..+.||.. +|++.+|+...+++++.+|+.+|+++||+++|+++
T Consensus 10 ~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~~~~i~~--~tGi~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~ 87 (345)
T 3s21_A 10 FQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIKTDVLGD--VAGIHARRLWDQDVQASDAATQAARKALIDANIGI 87 (345)
T ss_dssp CSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCCCCHHHH--TTCCSEEEECSSCCCHHHHHHHHHHHHHHHHTCCG
T ss_pred ecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCCHHHHHH--hhCceeEEECCCCCCHHHHHHHHHHHHHHHcCCCH
Confidence 47788999999999999999887653 23567765 89999877655688999999999999999999999
Q ss_pred CccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccc
Q psy1213 91 DLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170 (472)
Q Consensus 91 ~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~ 170 (472)
++||.|++++.++++..+..+..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|.....
T Consensus 88 ~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~~- 166 (345)
T 3s21_A 88 EKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEK- 166 (345)
T ss_dssp GGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHHH-
T ss_pred HHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhcc-
Confidence 9999999999888877788999999999997568999999999999999999999999999999999999998642000
Q ss_pred hhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHH
Q psy1213 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQA 250 (472)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a 250 (472)
. .. .+ +. + ..+.
T Consensus 167 --~----~~----------------~~----~~---~----------------------~~~~----------------- 178 (345)
T 3s21_A 167 --T----LE----------------RM----TS---P----------------------DVTE----------------- 178 (345)
T ss_dssp --H----HH----------------HH----TC---T----------------------TCCH-----------------
T ss_pred --c----cc----------------cc----cC---C----------------------ccch-----------------
Confidence 0 00 00 00 0 0000
Q ss_pred HHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEE
Q psy1213 251 QEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330 (472)
Q Consensus 251 ~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~ 330 (472)
++|+. ...+...+|||+|+||.+.+... + ...
T Consensus 179 ----------------~~f~~---------------------------~~~~~~~GdGA~A~vl~~~~~~~--~---~~~ 210 (345)
T 3s21_A 179 ----------------EEFRN---------------------------ELAALTLGCGAAAMVMARSELVP--D---APR 210 (345)
T ss_dssp ----------------HHHHH---------------------------HHGGGGBCCEEEEEEEEEGGGST--T---SCE
T ss_pred ----------------hhhhh---------------------------hccceeeccceeEEEEecCCCCC--C---Ccc
Confidence 00100 01122379999999999754311 1 124
Q ss_pred EEEeEEeccCC-cc--------ccccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchh
Q psy1213 331 LRDFVYVSQDP-KD--------QLLLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEW 391 (472)
Q Consensus 331 I~g~~~~~~~p-~~--------~~~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~ 391 (472)
|.+.....+.. .. ....+ ...+++++|+++|++++|||+|-+|-..........+.||
T Consensus 211 i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~~~~~lg--- 287 (345)
T 3s21_A 211 YKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPHTAAFVKSFG--- 287 (345)
T ss_dssp EEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHHHHHHHHHHT---
T ss_pred eeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcC---
Confidence 55544432200 00 00011 1356789999999999999999999999876666677888
Q ss_pred hhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEE
Q psy1213 392 FAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464 (472)
Q Consensus 392 ~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~ 464 (472)
+|.+++..+ +--+||...|+-...+.+++.+=+-+.|++.|..+++.|-.-.+++|+
T Consensus 288 --------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 288 --------------IDPAKVMTI--FGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp --------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHHHHTCCCTTCEEEEEEEETTTEEEEEEEE
T ss_pred --------------cCHHHceee--HhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhhhheEEEEE
Confidence 555554321 234799999998888888877633345677777665544445566664
No 45
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.93 E-value=9e-26 Score=273.26 Aligned_cols=288 Identities=14% Similarity=0.104 Sum_probs=202.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccC--------EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 70 MAHELARHSLIGILQKTGISKDLID--------YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id--------~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...+|+++++++||+|+|+++++|+ ++++|+..+.. .....+..++.
T Consensus 2646 p~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~ 2725 (3089)
T 3zen_D 2646 RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQS 2725 (3089)
T ss_dssp HHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHH
Confidence 3567999999999999999999884 68888754321 01224455554
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
++|+ .+|+++|+++|+|+++||++|++.|++|++|++||+|+|.++..++.. +.
T Consensus 2726 ~lGl--~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~-------f~----------------- 2779 (3089)
T 3zen_D 2726 YVGG--YGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIG-------FG----------------- 2779 (3089)
T ss_dssp TTCC--CSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-------HH-----------------
T ss_pred HcCC--CCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHH-------HH-----------------
Confidence 5699 589999999999999999999999999999999999999975422110 00
Q ss_pred cCCCCCCCCcccccccccCCchhH-HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCC
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGH-SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGV 275 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~ 275 (472)
.++. ....++..++.+ |... .++|+.+
T Consensus 2780 --------------------~~~als~~~~~~~~~~s----------------------------p~~~-crpFd~~--- 2807 (3089)
T 3zen_D 2780 --------------------DMAATADTEMMRAKGIS----------------------------DSKF-SRANDRR--- 2807 (3089)
T ss_dssp --------------------HHTCBCCHHHHHHTTCC----------------------------TTTS-CCSSBTT---
T ss_pred --------------------HhhhhhcchhhhhccCC----------------------------cccc-cCccccC---
Confidence 0000 001122222211 1111 1233221
Q ss_pred ccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--cc--------
Q psy1213 276 RVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--QL-------- 345 (472)
Q Consensus 276 ~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~~-------- 345 (472)
.+|.+ ++|||+++||++.+.|+++|+++++.|.+.+...+.... ..
T Consensus 2808 -----------------~dG~v-------~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a 2863 (3089)
T 3zen_D 2808 -----------------RLGFL-------EAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGA 2863 (3089)
T ss_dssp -----------------CCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGG
T ss_pred -----------------CCCEE-------EeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhH
Confidence 23555 899999999999999999999999988887775442110 00
Q ss_pred -cccHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCC
Q psy1213 346 -LLGPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHP 423 (472)
Q Consensus 346 -~~~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp 423 (472)
..+...++++||++||++++|||+||.|+++|. .+.++++++.. +.. -.| +-+..++|+++++..+|||
T Consensus 2864 ~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~a--l~~-~fg------~~~~~~~~v~s~Ks~iGH~ 2934 (3089)
T 3zen_D 2864 ARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHER--IAD-SMG------RAPGNPLFIVSQKTLTGHA 2934 (3089)
T ss_dssp STTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHH--HHH-HTT------CCTTCCEEEECSHHHHCBC
T ss_pred hhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHH--HHH-HhC------ccCCCcceecccccccCCc
Confidence 112346899999999999999999999999995 35555553210 100 001 0111348899999999999
Q ss_pred CCCcHHHHHHHHHHHHhhcc----------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 424 FAATGVRLTVHAANRLVRED----------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 424 ~gasG~~~v~e~v~qL~~~~----------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
.||+|+.+++.++++|+++- .+++++++++.||.|+++||+..+.
T Consensus 2935 ~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~ 3013 (3089)
T 3zen_D 2935 KGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEA 3013 (3089)
T ss_dssp STTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGG
T ss_pred hhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCch
Confidence 99999999999999998641 1467788999999999999998653
No 46
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=99.93 E-value=2.5e-25 Score=224.55 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=129.7
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.+.+|.|+|.|+|++.++|+++.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.||+
T Consensus 12 ~~srI~g~g~ylP~~~v~n~el~~~~~~~~e~I~~--rtGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~ 89 (350)
T 4ewp_A 12 AASRIVAVGAYRPANLVPNEDLIGPIDSSDEWIRQ--RTGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIV 89 (350)
T ss_dssp SEEEEEEEEEECCSCEEEHHHHTTTTTCCHHHHHH--HHCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred CCCEEEEEEEEcCCCeEcHHHHHHHhCCCHHHHHh--ccCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 456799999999999999999887764 678876 8999987766678999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
++.++++..|..+..++..||++ +.++++++.+|+++++||..|..+|++|.++.+||+++|.+|
T Consensus 90 ~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s 154 (350)
T 4ewp_A 90 STVTFPHATPSAAALVAHEIGAT-PAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLS 154 (350)
T ss_dssp ECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG
T ss_pred EeccCCCCCCchHHHHHHHhCCC-CceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeece
Confidence 99999887899999999999997 678999999999999999999999999999999999999875
No 47
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=99.93 E-value=1.4e-25 Score=226.88 Aligned_cols=294 Identities=17% Similarity=0.095 Sum_probs=216.2
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|++
T Consensus 24 ~~~~I~~~g~~~P~~~v~~~~l~~~~~~~~~~i~~--~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~ 101 (359)
T 3h78_A 24 GNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVE--RTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLV 101 (359)
T ss_dssp CCCEEEEEEEECCSEEEEHHHHTTTSSCCHHHHHH--HHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred CCcEEEEEEEECCCceEcHHHHHHHhCCCHHHHHH--hcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEE
Confidence 678899999999999999988876643 557755 8899887666668999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHH
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLL 178 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~ 178 (472)
++.+++...+.++..++..+|++ ++++++++.+|+|+++||..|..+|++|.++++||+|+|.+|.....
T Consensus 102 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~~~--------- 171 (359)
T 3h78_A 102 NTLSPDHHDPSQACLIQPLLGLR-HIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDC--------- 171 (359)
T ss_dssp ECSSCSSSBSCHHHHHHHHHTCC-SCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGCCC---------
T ss_pred EeCCCCCCCCcHHHHHHHHcCCC-CCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccCCc---------
Confidence 99888776788899999999997 78999999999999999999999999999999999999997642100
Q ss_pred HhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCC
Q psy1213 179 LRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD 258 (472)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~ 258 (472)
.
T Consensus 172 ---------------------~---------------------------------------------------------- 172 (359)
T 3h78_A 172 ---------------------S---------------------------------------------------------- 172 (359)
T ss_dssp ---------------------S----------------------------------------------------------
T ss_pred ---------------------c----------------------------------------------------------
Confidence 0
Q ss_pred CccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec
Q psy1213 259 ILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS 338 (472)
Q Consensus 259 ~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~ 338 (472)
|. .. ..|...+|||+|+||...+. ..+ .|.++...+
T Consensus 173 -------------d~-----~~-------------------~t~~lfGDGAaA~vl~~~~~-----~~~--~i~~~~~~s 208 (359)
T 3h78_A 173 -------------DR-----GR-------------------NLSILLGDGAGAVVVSAGES-----LED--GLLDLRLGA 208 (359)
T ss_dssp -------------TT-----TH-------------------HHHTTBCEEEEEEEEECCSC-----SSS--EEEEEEEEE
T ss_pred -------------cc-----cc-------------------cccceecceeEEEEEEecCC-----CCC--ceEEEEEEE
Confidence 00 00 01223799999999986431 011 222221111
Q ss_pred c----------------CC--------c-c-cc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHH
Q psy1213 339 Q----------------DP--------K-D-QL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381 (472)
Q Consensus 339 ~----------------~p--------~-~-~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~ 381 (472)
+ .| . . .. ..+ ...+++++|+++|++++|||+|=.|-.......
T Consensus 209 ~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i~~ 288 (359)
T 3h78_A 209 DGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILD 288 (359)
T ss_dssp CGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHH
T ss_pred ccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHH
Confidence 0 00 0 0 00 011 135678999999999999999999999987766
Q ss_pred HHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEE
Q psy1213 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGM 461 (472)
Q Consensus 382 ~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~ 461 (472)
...+.|| +|.+++..+ +--+||...|+=...+.+++.+ -+.|++.|..+++.|-.-.++
T Consensus 289 ~~~~~lg-----------------l~~ek~~~~--l~~~GNt~sAsi~l~L~~~~~~--l~~Gd~vll~~fG~G~t~~~~ 347 (359)
T 3h78_A 289 AVQEQLG-----------------IPQHKFAVT--VDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAA 347 (359)
T ss_dssp HHHHHHT-----------------CCGGGBCCC--HHHHCBCGGGHHHHHHHHHGGG--SCTTCEEEEEEEETTTEEEEE
T ss_pred HHHHHhC-----------------cCHHHhhhh--hhcccchHHHHHHHHHHHHHHh--CCCCCEEEEEEEchhhhheee
Confidence 6778888 566555443 3347999999988888888777 345677777665544445667
Q ss_pred EEEeCCCCC
Q psy1213 462 IIERHPDAT 470 (472)
Q Consensus 462 ~l~~~~~~~ 470 (472)
+|+-.+..|
T Consensus 348 ll~~~~~~~ 356 (359)
T 3h78_A 348 LYRKPEEVN 356 (359)
T ss_dssp EEECC----
T ss_pred eEEehhhhc
Confidence 776544443
No 48
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=99.93 E-value=2e-25 Score=226.30 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=129.2
Q ss_pred ccccceeeeeecccCCCCcccccccccC---CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCE
Q psy1213 19 TITNMSLKSICTSHNVYSPRKSVKDKTG---KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDY 95 (472)
Q Consensus 19 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~ 95 (472)
++.++.|.++++|+|++.++|+.+.+.. .+.||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.
T Consensus 27 ~~~~v~I~gig~~lP~~~v~n~~l~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~ 104 (365)
T 3gwa_A 27 HPPRAAIADIAGHLPEQVLTNDVLAQLYPDWPAEKILA--KTGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVDF 104 (365)
T ss_dssp --CEEEEEEEEEECCSEEEEHHHHHHHCTTCCHHHHHH--HHCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCE
T ss_pred eeccEEEEEEEEeCCCcEEcHHHHHHHccCCCHHHHHH--hcCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 3578899999999999999998888754 2556655 7899887665568999999999999999999999999999
Q ss_pred EEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 96 IVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 96 vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
|++++..++...+..+..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|.
T Consensus 105 vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 105 VILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK 174 (365)
T ss_dssp EEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred EEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc
Confidence 9999988877778899999999999757999999999999999999999999999999999999999764
No 49
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=99.93 E-value=5.6e-25 Score=222.21 Aligned_cols=294 Identities=14% Similarity=0.063 Sum_probs=218.3
Q ss_pred cccceeeeeecccCCCCcccccccccCC--c-eEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGK--N-IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYI 96 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~-~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~v 96 (472)
++++.|.++++|+|++.++|+.+.+... + .||.. +|++.+|+...++++..+|+.+|+++||+++|+++++||.|
T Consensus 14 ~~~v~I~~ig~~lP~~~v~n~~l~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~v 91 (354)
T 4efi_A 14 TQGARIAGVVSCVPSKQVDNDYFVERFDASAVRDVVK--MIGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDAL 91 (354)
T ss_dssp EESEEEEEEEEEECSCEEEGGGGTTTSCHHHHHHHHH--HHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred EcceEEEEEEEECCCcEEcHHHHHHHhCCCcHHHHHH--hcCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 4678899999999999999999888653 2 46655 78898876655689999999999999999999999999999
Q ss_pred EEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHH
Q psy1213 97 VYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRS 176 (472)
Q Consensus 97 i~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~ 176 (472)
++++.+++...+.++..++..+|++.++++++++.+|+|+++||..|.++|++|.++++||+|+|.+|....
T Consensus 92 i~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~-------- 163 (354)
T 4efi_A 92 IFVSQTPNYRLPATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMID-------- 163 (354)
T ss_dssp EEECSSCSCSSSCHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGCC--------
T ss_pred EEEeCCCCCCCCcHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccCC--------
Confidence 999988877788999999999999657999999999999999999999999999999999999999764110
Q ss_pred HHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCC
Q psy1213 177 LLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL 256 (472)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~ 256 (472)
T Consensus 164 -------------------------------------------------------------------------------- 163 (354)
T 4efi_A 164 -------------------------------------------------------------------------------- 163 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcE-EEEEeE
Q psy1213 257 TDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKA-YLRDFV 335 (472)
Q Consensus 257 ~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a-~I~g~~ 335 (472)
|. ++ ..|...+|||+|+||...+.. .... .+...+
T Consensus 164 ----~~--------------------------------d~---~~~~lfGDGA~A~vl~~~~~~-----~~~~~~~~s~g 199 (354)
T 4efi_A 164 ----PT--------------------------------DR---STSLLFGDAGTMTALETSNGD-----AAAHFIIGADG 199 (354)
T ss_dssp ----TT--------------------------------CH---HHHTTBCCEEEEEEEEECCSC-----CEEEEEEEECG
T ss_pred ----cc--------------------------------cc---ccccccccceeEEEEeecCCC-----CceEEEEEEcC
Confidence 00 00 001237999999999864311 1111 111111
Q ss_pred Eecc---------CCcc-------------cc-ccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHH
Q psy1213 336 YVSQ---------DPKD-------------QL-LLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILA 382 (472)
Q Consensus 336 ~~~~---------~p~~-------------~~-~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~ 382 (472)
...+ .|.. .. ..+ ...+++++|+++|++++|||+|=.|-........
T Consensus 200 ~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i~~~ 279 (354)
T 4efi_A 200 KGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLFMLKH 279 (354)
T ss_dssp GGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHH
T ss_pred CCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHH
Confidence 0000 0100 00 001 1356789999999999999999999998876666
Q ss_pred HHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEE
Q psy1213 383 NLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462 (472)
Q Consensus 383 ~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~ 462 (472)
..+.|| +|.+++..+ +--+||...|+=...+.+++.+=+-+.|++.|..+++.|-.-.+++
T Consensus 280 ~~~~Lg-----------------l~~ek~~~~--l~~~GNt~sasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~l 340 (354)
T 4efi_A 280 LAKKAG-----------------LPAERVPVN--IGEYGNTSCASIPLLITTELKDRLKEETLQLGMFGFGVGYSWASAA 340 (354)
T ss_dssp HHHHTT-----------------CCGGGSCCC--HHHHCBCGGGHHHHHHHHHSHHHHHHSCEEEEEEEEETTTEEEEEE
T ss_pred HHHHhC-----------------cCHHHHHHH--HhhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheeeE
Confidence 778888 565555432 3447999999988888887766444566777776665555556777
Q ss_pred EEeC
Q psy1213 463 IERH 466 (472)
Q Consensus 463 l~~~ 466 (472)
|+-.
T Consensus 341 l~~~ 344 (354)
T 4efi_A 341 LAVG 344 (354)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7754
No 50
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=99.93 E-value=1.5e-26 Score=236.31 Aligned_cols=294 Identities=14% Similarity=0.046 Sum_probs=211.9
Q ss_pred ceeeeeecccCCCCcccccccccCCc-----------eEEEecccccccccCccCC-----------------CCCHHHH
Q psy1213 23 MSLKSICTSHNVYSPRKSVKDKTGKN-----------IVFVDGVRTPFLLSGTDYA-----------------NMMAHEL 74 (472)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~Ivg~~~t~~~~~~~~~~-----------------~~~~~~L 74 (472)
..|.|++.|+|++.++|+.+.+.... .||.. +|++.+|+...+ +++..+|
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~i~~--~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~l 87 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLPLALRLIE--NTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSR 87 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTTHHHHHHHHH--HTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhhHHHHHHHHH--hcCCCcceeecChhhhccCCChhHHHHHHHHHHHHH
Confidence 57999999999999888776644321 23433 677776653333 4567899
Q ss_pred HHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHHcCCCC
Q psy1213 75 ARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIAAGAYD 153 (472)
Q Consensus 75 a~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~sG~~d 153 (472)
+.+|+++||+++|+++++||.|++++..+ +..+..+..++..+|++..++++++ +++|+|+++||..|.++|++|.++
T Consensus 88 a~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~ 166 (382)
T 1u0m_A 88 VPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEA 166 (382)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999998877 4467889999999999634699999 999999999999999999999999
Q ss_pred EEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCH
Q psy1213 154 VVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSR 233 (472)
Q Consensus 154 ~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~ 233 (472)
++||+|+|.++.... .+ +.++
T Consensus 167 ~vLv~g~e~~s~~~~--------------------------------~~---------------------------d~~~ 187 (382)
T 1u0m_A 167 NALIVACEFCSLCYQ--------------------------------PT---------------------------DLGV 187 (382)
T ss_dssp EEEEEEEEEGGGGCC--------------------------------TT---------------------------CCSH
T ss_pred EEEEEEEeccchhcC--------------------------------cc---------------------------cCCH
Confidence 999999998753100 00 0000
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeee
Q psy1213 234 KEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACV 313 (472)
Q Consensus 234 e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvv 313 (472)
+. ..++...+|||+|+|
T Consensus 188 ~~---------------------------------------------------------------~~~~~lfGDGA~A~v 204 (382)
T 1u0m_A 188 GS---------------------------------------------------------------LLCNGLFGDGIAAAV 204 (382)
T ss_dssp HH---------------------------------------------------------------HHHHHHBCEEEEEEE
T ss_pred HH---------------------------------------------------------------hhccchhcCCcEEEE
Confidence 00 000112799999999
Q ss_pred ecCHHHHHHcCCCCcEEEEEeEEec--cCCc------------------cc--ccccHHHHHHHHHHHcCCCcCCcCEEE
Q psy1213 314 IMTEAKAKQLGLKPKAYLRDFVYVS--QDPK------------------DQ--LLLGPAYATPQVLERAGLSLSDIDAWE 371 (472)
Q Consensus 314 L~s~e~A~~~g~~~~a~I~g~~~~~--~~p~------------------~~--~~~~~~~a~~~Al~~Agl~~~dId~~e 371 (472)
|++.+. . ..+|.++.... +... .+ ...... +++++|+++|++++|||+|.
T Consensus 205 L~~~~~---~----g~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~ 276 (382)
T 1u0m_A 205 VRGRGG---T----GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDASDLDFYI 276 (382)
T ss_dssp EETTTC---S----EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCE
T ss_pred EeccCC---C----CcEEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEE
Confidence 987542 1 13566654421 1000 00 011224 88999999999999999999
Q ss_pred ccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCC-CCccccCCCCCcHHHHHHHHHHHHhhccCCcchhh
Q psy1213 372 VHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWG-GSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450 (472)
Q Consensus 372 ~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~G-G~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~ 450 (472)
.|..++...-...+.|| +|.++++++. -+--+||+..|+....+.+++.+-+-+.|++.|..
T Consensus 277 ~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~~~g~~~~Gd~vll~ 339 (382)
T 1u0m_A 277 VHAGGPRILDDLSTFLE-----------------VDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLA 339 (382)
T ss_dssp EECSHHHHHHHHHHHSC-----------------SCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHSCCCCSSCCCEEE
T ss_pred ECCCCHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 99999976666677887 5665654321 12348999999999999888876554567788877
Q ss_pred hhccCcceeEEEEEeC
Q psy1213 451 ACAAGGQGVGMIIERH 466 (472)
Q Consensus 451 ~~~~GG~~~a~~l~~~ 466 (472)
+++.|....+++|+..
T Consensus 340 ~~G~G~t~~~~vl~~~ 355 (382)
T 1u0m_A 340 GFGPGITAEMSLGCWQ 355 (382)
T ss_dssp EEETTTEEEEEEEEEE
T ss_pred EEcccceeEEEEEEEe
Confidence 6665555667788753
No 51
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=99.92 E-value=4.2e-26 Score=233.79 Aligned_cols=302 Identities=16% Similarity=0.118 Sum_probs=214.9
Q ss_pred ccceeeeeecccCCCCcccccccccCC-----------ceEEEecccccccccCc-cCC---------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK-----------NIVFVDGVRTPFLLSGT-DYA--------------------- 67 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-----------~~~Ivg~~~t~~~~~~~-~~~--------------------- 67 (472)
.+..|.++++|+|++.++|+.+.+... ..||.. +|++.+|+. ..+
T Consensus 31 ~~~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~a~~~~~~~~~~~~~p~~~~~r~~~ 108 (393)
T 1ted_A 31 TVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQ--KSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL 108 (393)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHH--TSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred cccEEEEeeeeCCCcccCHHHHHHHHHHhcccccHHHHHHHHHH--hCCcCcceeeecChHhcccccccCCCCHHHHHHH
Confidence 447799999999999999977764332 135544 788887654 332
Q ss_pred -CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHH
Q psy1213 68 -NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIG 145 (472)
Q Consensus 68 -~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~ 145 (472)
+++..+|+.+|+++||+++|+++++||.+++++..+ ...+.++..++..+|++..++++++ +++|+|+++||..|.+
T Consensus 109 ~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~ 187 (393)
T 1ted_A 109 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN 187 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHH
Confidence 357889999999999999999999999999998877 4467889999999999744678998 9999999999999999
Q ss_pred HHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHH
Q psy1213 146 LIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 225 (472)
+|++|.+|++||+|+|.++....
T Consensus 188 ~i~~G~~~~vLv~g~e~~s~~~~--------------------------------------------------------- 210 (393)
T 1ted_A 188 YVRAHPAMKALVVCIELCSVNAV--------------------------------------------------------- 210 (393)
T ss_dssp HHHHSTTCEEEEEEEEECGGGCC---------------------------------------------------------
T ss_pred HHHcCCCCEEEEEEEEeccccCC---------------------------------------------------------
Confidence 99999999999999998763100
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCc
Q psy1213 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFL 305 (472)
Q Consensus 226 ~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~ 305 (472)
|+..++. ...+...
T Consensus 211 ---~~~~r~~---------------------------------------------------------------~~~~~lf 224 (393)
T 1ted_A 211 ---FADDIND---------------------------------------------------------------VVIHSLF 224 (393)
T ss_dssp ---CCSSHHH---------------------------------------------------------------HHHHHHB
T ss_pred ---CCCCHHH---------------------------------------------------------------hhhhhhh
Confidence 0000000 0001127
Q ss_pred CcceeeeeecCHHHHHHcCCCCcEEEEEeEEe--ccCCcc----------c--cc--------ccHHHHHHHHHHHcCCC
Q psy1213 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYV--SQDPKD----------Q--LL--------LGPAYATPQVLERAGLS 363 (472)
Q Consensus 306 ~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~--~~~p~~----------~--~~--------~~~~~a~~~Al~~Agl~ 363 (472)
+|||+|+||++.+.+...+ ..+++|.+++.. .+.... . .+ .....+++++|+++|++
T Consensus 225 GDGA~A~vL~~~~~~~~~~-~~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~ 303 (393)
T 1ted_A 225 GDGCAALVIGASQVQEKLE-PGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQ 303 (393)
T ss_dssp CEEEEEEEEEEECTTSCCC-TTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCccEEEEEecCCCccccC-cceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999998765331112 234578887554 221000 0 01 11246789999999999
Q ss_pred cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHHHHHhh-
Q psy1213 364 LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAANRLVR- 441 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v~qL~~- 441 (472)
++|||+|.+|..++...-...+.|| +|.+++..+ --+--+||...|+-...+.+++.+-+-
T Consensus 304 ~~dId~~~~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~~g~~~ 366 (393)
T 1ted_A 304 ISDIDLWAIHPGGPKIIEQSVRSLG-----------------ISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESA 366 (393)
T ss_dssp GGGCSCEEECCSCHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSS
T ss_pred HhHCCEEEECCCcHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHhcCccC
Confidence 9999999999999976666667787 565555321 012347898888888777777665433
Q ss_pred ccCCcchhhhhccCcceeEEEEEeC
Q psy1213 442 EDGQFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 442 ~~g~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+.|++.|..+++.|....+++|+..
T Consensus 367 ~~Gd~vll~~~G~G~t~~~~~l~~~ 391 (393)
T 1ted_A 367 KAISTGVAFAFGPGVTVEGMLFDII 391 (393)
T ss_dssp SSSEEEEEEEEETTTEEEEEEEEEC
T ss_pred CCCCeEEEEEeccchhhhhhheeec
Confidence 2567777766665555567777754
No 52
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=99.92 E-value=6.1e-26 Score=231.03 Aligned_cols=295 Identities=15% Similarity=0.079 Sum_probs=209.5
Q ss_pred cceeeeeecccCCCCcccccccccCC------------ceEEEecccccccccCccCCC---------------------
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK------------NIVFVDGVRTPFLLSGTDYAN--------------------- 68 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~------------~~~Ivg~~~t~~~~~~~~~~~--------------------- 68 (472)
++.|.|++.|+|++.++++.+.+... +.+|.. +|++.+|+...++
T Consensus 13 ~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (374)
T 2h84_A 13 NSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFE--QSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQ 90 (374)
T ss_dssp CCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHH--TTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHH
T ss_pred CeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHH--hCCcCcceeecCccccccccccCChHHHHHHHHH
Confidence 56799999999999999977765321 123443 7888876544445
Q ss_pred --CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec-ccCccHHHHHHHHHH
Q psy1213 69 --MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT-MACISSNQGITTGIG 145 (472)
Q Consensus 69 --~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~-~~Casg~~al~~A~~ 145 (472)
++..+|+.+|+++||+++|+++++||.+++++..+. ..+.++..++..+|++..+++++++ ++|+|+++||..|++
T Consensus 91 ~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~-~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~ 169 (374)
T 2h84_A 91 FKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGI-IIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAAS 169 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCC-CSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCC-CCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHH
Confidence 668899999999999999999999999999987763 4678899999999996346999997 899999999999999
Q ss_pred HHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHH
Q psy1213 146 LIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 225 (472)
+|++|.++++||+|+|.++..... |
T Consensus 170 ~i~~g~~~~vLv~g~e~~s~~~~~-------------------------------------~------------------ 194 (374)
T 2h84_A 170 LAKASPRNRILVVCTEVCSLHFSN-------------------------------------T------------------ 194 (374)
T ss_dssp HHTTCTTCEEEEEEEECCGGGCCC-------------------------------------S------------------
T ss_pred HHHcCCCCEEEEEEEEecchhhcC-------------------------------------C------------------
Confidence 999999999999999987531100 0
Q ss_pred HHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCc
Q psy1213 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFL 305 (472)
Q Consensus 226 ~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~ 305 (472)
..++ . ..++...
T Consensus 195 -----~dr~-----------------------------------------------~----------------~~~~~lf 206 (374)
T 2h84_A 195 -----DGGD-----------------------------------------------Q----------------MVASSIF 206 (374)
T ss_dssp -----SSHH-----------------------------------------------H----------------HHHHHHB
T ss_pred -----CCHH-----------------------------------------------H----------------Hhhhhhh
Confidence 0000 0 0011127
Q ss_pred CcceeeeeecCHHHHHHcCCCCcEEEEEeEEecc--C---------Ccc-cc----------cccHHHHHHHHHHHcC--
Q psy1213 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ--D---------PKD-QL----------LLGPAYATPQVLERAG-- 361 (472)
Q Consensus 306 ~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~--~---------p~~-~~----------~~~~~~a~~~Al~~Ag-- 361 (472)
+|||+|+||.+.+.+++.+ . .+|.+.+.... . ... .+ ......+++++|+++|
T Consensus 207 GDGA~A~vL~~~~~~~~~~--~-~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~ 283 (374)
T 2h84_A 207 ADGSAAYIIGCNPRIEETP--L-YEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQ 283 (374)
T ss_dssp CCEEEEEEEESSCCTTCCC--C-EEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccCcEEEEEecCCCcccCC--c-eeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999765443222 2 36766654311 0 000 00 0122567899999999
Q ss_pred ----CCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHH
Q psy1213 362 ----LSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 362 ----l~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v 436 (472)
++++|||+| +|..++...-...+.|| +|.+++.++ --+--+||...|+-...+.+++
T Consensus 284 ~~~~l~~~did~~-~H~~~~~i~d~~~~~lg-----------------l~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~ 345 (374)
T 2h84_A 284 TSTAISAKDCEFL-IHTGGKSILMNIENSLG-----------------IDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR 345 (374)
T ss_dssp SCSCCCSSSSEEE-ECCCCHHHHHHHHHHTT-----------------CCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred cccCCChhhcCEe-ECCCCHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 999999999 99999976666677888 565555421 0123478988888888887776
Q ss_pred HHHhhccCCcchhhhhccCcceeEEEEEe
Q psy1213 437 NRLVREDGQFGLIAACAAGGQGVGMIIER 465 (472)
Q Consensus 437 ~qL~~~~g~~gl~~~~~~GG~~~a~~l~~ 465 (472)
.+-+ .|++.|..+++.|-.-.+++|+.
T Consensus 346 ~~~~--~Gd~vll~~~G~G~t~~~~ll~~ 372 (374)
T 2h84_A 346 KSKS--LPTYSISLAFGPGLAFEGCFLKN 372 (374)
T ss_dssp TCSC--CCSEEEEEEEETTTEEEEEEEEE
T ss_pred hhcC--CCCeEEEEEeccchhhhhhhhee
Confidence 6533 56777776555444445677765
No 53
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.92 E-value=1.5e-24 Score=251.50 Aligned_cols=287 Identities=15% Similarity=0.119 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..+.. .....+.+++.
T Consensus 1211 ~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~ 1290 (1887)
T 2uv8_A 1211 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1290 (1887)
T ss_dssp HHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHH
Confidence 4568999999999999994 766 44 67777654320 11234667887
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.||+.|++.|++|++|++||+|+|.++...+. .|.
T Consensus 1291 ~lgl--~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~-------~f~----------------- 1344 (1887)
T 2uv8_A 1291 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSF-------EFG----------------- 1344 (1887)
T ss_dssp TTCC--CSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHH-------HHH-----------------
T ss_pred HcCC--ccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------HHH-----------------
Confidence 4999 68999999999999999999999999999999999999987432110 010
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.| +.+....++++ .| ..|...+ +|++.
T Consensus 1345 --------------------~m-----------~als~~~~e~~------------~g----~~p~~~~-RPfd~----- 1371 (1887)
T 2uv8_A 1345 --------------------NM-----------KATSNTLEEFE------------HG----RTPAEMS-RPATT----- 1371 (1887)
T ss_dssp --------------------HT-----------TCBCCHHHHHH------------TT----CCGGGSC-CTTBT-----
T ss_pred --------------------Hh-----------hhhccchhhhc------------cc----CCCccCc-CCCcc-----
Confidence 00 01000000000 01 1232221 22321
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cc-c-----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QL-L----- 346 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~-~----- 346 (472)
..+|++ ++||++++||++.+.|+++|++++++|+|++..++.... +. +
T Consensus 1372 ---------------~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~a 1429 (1887)
T 2uv8_A 1372 ---------------TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTA 1429 (1887)
T ss_dssp ---------------TCCSBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGG
T ss_pred ---------------cCCCcc-------cccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccc
Confidence 134555 899999999999999999999999999999987763210 00 0
Q ss_pred ---------c----------------------------------------------------------------------
Q psy1213 347 ---------L---------------------------------------------------------------------- 347 (472)
Q Consensus 347 ---------~---------------------------------------------------------------------- 347 (472)
.
T Consensus 1430 r~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~ 1509 (1887)
T 2uv8_A 1430 REHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1509 (1887)
T ss_dssp CCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0
Q ss_pred -------cHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc
Q psy1213 348 -------GPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS 419 (472)
Q Consensus 348 -------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a 419 (472)
+...++++||+++||+++|||++|+|+++|. .+..+++++... |...+.. .++.++ |+..+++
T Consensus 1510 ~~~~~~d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~-f~~~gr~---~~~pl~---v~s~Ksl-- 1580 (1887)
T 2uv8_A 1510 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEM-MKHLGRS---EGNPVI---GVFQKFL-- 1580 (1887)
T ss_dssp TSTTTTCSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHH-HHHHTCC---TTCCEE---EECTHHH--
T ss_pred cchhhchHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHH-HhhhccC---CCCcEE---EEecccc--
Confidence 0036889999999999999999999999994 577777777521 4322210 111233 5555544
Q ss_pred ccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEEEEeCC
Q psy1213 420 IGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 420 ~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+|||.||+|+.+++.++++|+.+ ..+++++++++.||.|+.+||+..|
T Consensus 1581 iGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1581 TGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp HCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred eechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 69999999999999999999864 1146778889999999999999753
No 54
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.3e-25 Score=250.30 Aligned_cols=288 Identities=16% Similarity=0.117 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCCC------------------------CChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEVK------------------------TSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~~------------------------~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..++.. ....+..++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 4569999999999999998 665 33 566665443310 1123556777
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.||+.|++.|++|++|++||+|+|.++..++...... +
T Consensus 1092 ~LGl--~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~m-----------------g---- 1148 (1688)
T 2pff_A 1092 LISS--SGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNM-----------------K---- 1148 (1688)
T ss_dssp SCCC--CCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTT-----------------S----
T ss_pred HcCC--cCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhc-----------------c----
Confidence 6898 5899999999999999999999999999999999999999765432211000 0
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.+ + -+.++++ .| ..|...+ +|++.
T Consensus 1149 ----aL-----------S----------------~~~~e~a---------------~G----~~Pd~~c-RPFd~----- 1172 (1688)
T 2pff_A 1149 ----AT-----------S----------------NTLEEFE---------------HG----RTPAEMS-RPATT----- 1172 (1688)
T ss_dssp ----CS-----------C----------------CTTTTTT---------------SS----CCSSSSC-CSSSS-----
T ss_pred ----cc-----------c----------------cChhhhh---------------cC----CChhhcc-CcCcc-----
Confidence 00 0 0000000 00 1222111 12221
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----c-ccc----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----Q-LLL---- 347 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~-~~~---- 347 (472)
..+|.+ .+|||+++||++.+.|+++|++++++|.|++..++.... + .+.
T Consensus 1173 ---------------~rdGfv-------~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~A 1230 (1688)
T 2pff_A 1173 ---------------TRNGFM-------EAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTA 1230 (1688)
T ss_dssp ---------------SCCCCC-------CCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSS
T ss_pred ---------------CCCCCc-------cccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchh
Confidence 133444 899999999999999999999999999999886652100 0 000
Q ss_pred --------------------------------------------------------------------------------
Q psy1213 348 -------------------------------------------------------------------------------- 347 (472)
Q Consensus 348 -------------------------------------------------------------------------------- 347 (472)
T Consensus 1231 r~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~G 1310 (1688)
T 2pff_A 1231 REHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1310 (1688)
T ss_dssp SSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTT
T ss_pred hhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence
Q ss_pred -------cHHHHHHHHHHHcCCCcCCcCEEEccCcchH-HHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc
Q psy1213 348 -------GPAYATPQVLERAGLSLSDIDAWEVHEAFAG-QILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS 419 (472)
Q Consensus 348 -------~~~~a~~~Al~~Agl~~~dId~~e~hd~f~~-~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a 419 (472)
+...++++||+++||+++|||++|+|+++|. .+..+++++... |...+. ..++.++ ++...++
T Consensus 1311 n~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD~iE~~AL~~a-f~~~gr---~~g~pl~---V~S~Ksl-- 1381 (1688)
T 2pff_A 1311 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEM-MKHLGR---SEGNPVI---GVFQKFL-- 1381 (1688)
T ss_dssp TSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSSTTTTTTTGGG-TGGGCC---CTTCCCC---CCCCTTT--
T ss_pred CceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCccccHHHHHHHHHH-HhhhCc---CCCCeEE---EEeChhh--
Confidence 0036789999999999999999999999994 355555555421 322111 1112244 6666666
Q ss_pred ccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 420 IGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 420 ~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+|||.||+|+.+++.++++|+.+ ..+++++++++.||.|+.+||+..|.
T Consensus 1382 iGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~~~~~~~r~AlVnSFGFGGtNAhvILe~p~~ 1461 (1688)
T 2pff_A 1382 TGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPDY 1461 (1688)
T ss_dssp TCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTCCSSSSSSCCCCCCCCSTTCCCCCCEECSSS
T ss_pred hcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCccccCCCCcEEEEeeECCCCeeEEEEEeCCCc
Confidence 69999999999999999999864 11467788999999999999997654
No 55
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.91 E-value=2.5e-24 Score=249.12 Aligned_cols=287 Identities=16% Similarity=0.118 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCc----cC----EEEEEeecCCC------------------------CCChHHHHHHH-
Q psy1213 71 AHELARHSLIGILQKTGIS-KDL----ID----YIVYGTVIQEV------------------------KTSNIGREAAL- 116 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~-~~~----Id----~vi~g~~~~~~------------------------~~~~~a~~ia~- 116 (472)
...|+++++++||+++|++ |.+ |+ ++++|+..++. .....+.+++.
T Consensus 1186 ~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~ 1265 (1878)
T 2uv9_A 1186 VTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNML 1265 (1878)
T ss_dssp HHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHH
Confidence 4568899999999999998 766 44 67888755430 00124567777
Q ss_pred HcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhc
Q psy1213 117 SAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLAT 196 (472)
Q Consensus 117 ~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (472)
.+|+ .+|+++++++|+|++.+|+.|++.|++|++|++||+|+|.++...+. .|.
T Consensus 1266 ~lg~--~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~-------~f~----------------- 1319 (1878)
T 2uv9_A 1266 LLSS--TGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSY-------EFA----------------- 1319 (1878)
T ss_dssp TCCC--CCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHH-------HHH-----------------
T ss_pred hcCC--CCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHH-------HHH-----------------
Confidence 4999 58999999999999999999999999999999999999986532110 010
Q ss_pred cCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCc
Q psy1213 197 IRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR 276 (472)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~ 276 (472)
.| +.+....++++ .| ..|...+ +|++.
T Consensus 1320 --------------------~m-----------~als~~~de~a------------~g----~~p~~~~-RPfd~----- 1346 (1878)
T 2uv9_A 1320 --------------------NM-----------GATSNAKEEFA------------RG----REPGEMS-RPTST----- 1346 (1878)
T ss_dssp --------------------HH-----------TCBCCHHHHHT------------TT----CCTTSSC-CSSBT-----
T ss_pred --------------------Hh-----------hhhccchhhhh------------cC----CCcccCc-CCCcc-----
Confidence 00 01000001110 01 1232211 22221
Q ss_pred cCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--c-cccc-----
Q psy1213 277 VSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--Q-LLLG----- 348 (472)
Q Consensus 277 ~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--~-~~~~----- 348 (472)
..+|.+ .+||++++||++.+.|+++|++++++|.|++..++.... + .+.+
T Consensus 1347 ---------------~r~Gfv-------~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~a 1404 (1878)
T 2uv9_A 1347 ---------------TRNGFM-------ESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTA 1404 (1878)
T ss_dssp ---------------TCCCBC-------BBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGG
T ss_pred ---------------CCCCCc-------ccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhh
Confidence 134555 899999999999999999999999999999987652210 0 0000
Q ss_pred ---------------------------------------------------------------H----------------
Q psy1213 349 ---------------------------------------------------------------P---------------- 349 (472)
Q Consensus 349 ---------------------------------------------------------------~---------------- 349 (472)
.
T Consensus 1405 r~~~~~~ps~~~~~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~ 1484 (1878)
T 2uv9_A 1405 REKSGNFPSPLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAE 1484 (1878)
T ss_dssp CCCCCSSCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 0
Q ss_pred ---------------HHHHHHHHHHcCCCcCCcCEEEccCcch-HHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCC
Q psy1213 350 ---------------AYATPQVLERAGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNN 413 (472)
Q Consensus 350 ---------------~~a~~~Al~~Agl~~~dId~~e~hd~f~-~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~ 413 (472)
..++++||+++||+++|||++|+|+++| ..+..+++++... |...+.. .++.++ ++.
T Consensus 1485 a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~DId~veaHGTgT~~gD~~E~~al~~~-f~~~~r~---~~~pl~---v~s 1557 (1878)
T 2uv9_A 1485 AQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQ-LKHLGRT---KGNAVL---GIF 1557 (1878)
T ss_dssp HHHHHHTSTTTTCTTSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHH-HHHHTCC---TTCCEE---EEC
T ss_pred HHHhhcccccccChHHHHHHHHHHHcCCCHHHeeEEEEcCCCCcccCHHHHHHHHHH-HhhcCCC---CCCcee---EEe
Confidence 1688999999999999999999999999 4577777777521 3322210 112234 555
Q ss_pred CCCCccccCCCCCcHHHHHHHHHHHHhhc-------------------------------cCCcchhhhhccCcceeEEE
Q psy1213 414 WGGSLSIGHPFAATGVRLTVHAANRLVRE-------------------------------DGQFGLIAACAAGGQGVGMI 462 (472)
Q Consensus 414 ~GG~~a~Ghp~gasG~~~v~e~v~qL~~~-------------------------------~g~~gl~~~~~~GG~~~a~~ 462 (472)
.+++ +|||.||+|+.+++.++++|+++ ..+++++++++.||.|+.+|
T Consensus 1558 ~Ksl--iGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvI 1635 (1878)
T 2uv9_A 1558 QKYL--TGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAI 1635 (1878)
T ss_dssp THHH--HCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEE
T ss_pred cccc--cCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEE
Confidence 5555 69999999999999999999863 11466778899999999999
Q ss_pred EEeCC
Q psy1213 463 IERHP 467 (472)
Q Consensus 463 l~~~~ 467 (472)
|+..|
T Consensus 1636 le~p~ 1640 (1878)
T 2uv9_A 1636 GVHPK 1640 (1878)
T ss_dssp EECTH
T ss_pred EecCC
Confidence 99753
No 56
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=99.90 E-value=4.3e-24 Score=218.17 Aligned_cols=144 Identities=13% Similarity=0.102 Sum_probs=124.3
Q ss_pred cccccceeeeeecccCCCCccccccccc------------------------C--CceEEEecccccccccCccCCC---
Q psy1213 18 QTITNMSLKSICTSHNVYSPRKSVKDKT------------------------G--KNIVFVDGVRTPFLLSGTDYAN--- 68 (472)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------------------~--~~~~Ivg~~~t~~~~~~~~~~~--- 68 (472)
+.+++..|.|+|+|+|++.++|+++.+. . .+.||.. +|++.+|+...++
T Consensus 20 ~~~~~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~--~tGI~~R~~a~~~~~~ 97 (392)
T 3led_A 20 QGVRPAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEK--ASGIKSRYVVAKPGIV 97 (392)
T ss_dssp CBCCCEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHH--HHCCCEEEESCCGGGG
T ss_pred cccCceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHH--ccCCceEEEecCcccc
Confidence 3456788999999999999999887531 1 2567866 8999887643321
Q ss_pred -----------------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecc
Q psy1213 69 -----------------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131 (472)
Q Consensus 69 -----------------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~ 131 (472)
.+..+|+.+|+++||+++|+++++||.||+++.+++...|..+..++..+|+ ++++++++.
T Consensus 98 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl--~~~~~dv~~ 175 (392)
T 3led_A 98 DPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL--GGFAFDMNV 175 (392)
T ss_dssp CTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC--CSEEEEEEC
T ss_pred cccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC--CCeEEEECC
Confidence 1368999999999999999999999999999988887778899999999999 489999999
Q ss_pred cCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 132 ~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+|+|+++||..|.++|++|.++++||+|+|.+|.
T Consensus 176 aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~ 209 (392)
T 3led_A 176 ACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG 209 (392)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC
Confidence 9999999999999999999999999999998763
No 57
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=99.90 E-value=9e-24 Score=213.49 Aligned_cols=140 Identities=8% Similarity=-0.011 Sum_probs=119.8
Q ss_pred cccceeeeeecccCCCCcccccccccCCceEEEecccccccccCccCCCC--CHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 20 ITNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGTDYANM--MAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Ivg~~~t~~~~~~~~~~~~--~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
+.++.|.|+|.|+|++.+.|+.+++...+.++ .-+|++.+|+....++ ++.+|+.+|+++||+++|+++++||.|+
T Consensus 3 ~~~v~I~g~g~ylP~~~~~~~~~~~~~~~~~~--~~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi 80 (357)
T 3s3l_A 3 WENLFVSGVAAWLPPLSTAQDAVMAGLLDPAR--SKLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVL 80 (357)
T ss_dssp CSSCEEEEEEEECCCEEEHHHHHHTTSSCHHH--HHHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCceEEEEEEEECCCCCCHHHHHHhcCCcHHH--HHHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 46788999999999988888877765433333 2489998876544445 8999999999999999999999999999
Q ss_pred EEeec---CCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCC--EEEEEeecccC
Q psy1213 98 YGTVI---QEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYD--VVVAGGVEFMS 164 (472)
Q Consensus 98 ~g~~~---~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d--~vLv~G~e~~s 164 (472)
+++.. ++. +.++..++..+|++ ++++++|+.+|+|+++||..|..+|++|.++ ++||+|+|.+|
T Consensus 81 ~~t~~~~~~d~--~~~a~~v~~~lG~~-~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s 149 (357)
T 3s3l_A 81 HSSLWFQGIDL--WPAASYVAHEAVGR-HVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFA 149 (357)
T ss_dssp EECSSCCSSSS--SCHHHHHHHHHTCS-SSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCC
T ss_pred EEeccCCCccc--ccHHHHHHHHhCCC-CCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccc
Confidence 99873 433 36799999999996 7999999999999999999999999999999 99999999986
No 58
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=99.90 E-value=3.1e-23 Score=206.71 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=125.2
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+...+++ ..+|+.+|+++||+++|+++++||.+++
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~~~~~~~i~~--~~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~ 79 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMMDTSAAWIHS--RTGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILV 79 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTSCHHHHHH--HHSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHhCCChhhhhh--hcCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 357799999999999999988876543 567754 78888876544455 9999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
++.+++...+.++..++..+|++ ++++++++.+|+|+++||..|..+|++|.++++||+|+|.+|.
T Consensus 80 ~t~~~~~~~p~~a~~v~~~lGl~-~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~ 145 (321)
T 3il6_A 80 ATVTPDFNMPSVACQVQGAIGAT-EAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK 145 (321)
T ss_dssp ECSSCSCSSSCHHHHHHHHTTCT-TCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG
T ss_pred EeCCCCcCCCcHHHHHHHHcCCC-CceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence 99888877788999999999997 5999999999999999999999999999999999999999763
No 59
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=99.89 E-value=2.1e-23 Score=214.59 Aligned_cols=302 Identities=15% Similarity=0.091 Sum_probs=213.4
Q ss_pred ccceeeeeecccCCCCcccccccccC------C--------ceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG------K--------NIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~------~--------~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.++++|+|++.++|+.+.+.. + +.||.. +|++.+|+...++
T Consensus 28 ~~~~I~~ig~~~P~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (406)
T 2d3m_A 28 GTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICK--KTMIGKRYFNYDEEFLKKYPNITSYDEPSLN 105 (406)
T ss_dssp SCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--HSCCCEEEESCCHHHHTTCTTTSSSSSSCHH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhHHHHHHHHHh--ccCCcceEEeeChhhhccCcccccccCCChH
Confidence 45679999999999999997776532 0 235544 7888776433222
Q ss_pred -------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 69 -------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 69 -------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...+.++..++..+|++...+ +++++.+|+|+++||
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al 184 (406)
T 2d3m_A 106 DRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG-VDMPSADFQCAKLLGLHANVNKYCIYMQGAYAGGTVM 184 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCCHHHHHHHHcCcCCCcceeeeEcCccHHHHHHH
Confidence 47799999999999999999999999999998876 345778999999999974355 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.++..-.. |. +
T Consensus 185 ~~A~~~i~~g~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d--------- 216 (406)
T 2d3m_A 185 RYAKDLAENNRGARVLVVCAELTIMMLRA-------------------------------------PN--E--------- 216 (406)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECGGGTCCC-------------------------------------CC--S---------
T ss_pred HHHHHHHHcCCCCEEEEEEEEecchheeC-------------------------------------Cc--c---------
Confidence 99999999999999999999987641000 00 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
..+ ++ ..
T Consensus 217 ----------~~~-----------------------------------------------~~----------------~~ 223 (406)
T 2d3m_A 217 ----------THL-----------------------------------------------DN----------------AI 223 (406)
T ss_dssp ----------TTH-----------------------------------------------HH----------------HH
T ss_pred ----------cch-----------------------------------------------hh----------------hh
Confidence 000 00 00
Q ss_pred CCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCc-c-------------ccc--------ccHHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPK-D-------------QLL--------LGPAYATPQVL 357 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~-~-------------~~~--------~~~~~a~~~Al 357 (472)
.+...+|||+|+||.+.+.. +. .+..++.+.+....... . .+. .....+++++|
T Consensus 224 ~~~lfGDGAaA~vL~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 300 (406)
T 2d3m_A 224 GISLFGDGAAALIIGSDPII---GVEKPMFEIVCTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVF 300 (406)
T ss_dssp HHTTBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred ccceeccceEEEEEecCCCC---ccCCCceEEEecccEEcCCCchhcceeeccCceEEEeCchHHHHHHHHHHHHHHHHH
Confidence 12237999999999865421 21 22356666654311000 0 000 01246789999
Q ss_pred HHcCCCcCCcCE----EEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHH
Q psy1213 358 ERAGLSLSDIDA----WEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLT 432 (472)
Q Consensus 358 ~~Agl~~~dId~----~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v 432 (472)
+++|++++ ||+ |-+|-......-...+.|| +|.+++..+ --+--+||...|+-...+
T Consensus 301 ~~agl~~~-id~~di~~v~Hq~~~~i~~~~~~~lg-----------------l~~~k~~~s~~~l~~~GNt~sAsi~~~L 362 (406)
T 2d3m_A 301 KSVGITPP-EDWNSLFWIPHPGGRAILDQVEAKLK-----------------LRPEKFRAARTVLWDYGNMVSASVGYIL 362 (406)
T ss_dssp HTTTCCCC-SSGGGSEEEECCSCHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HhcCCCCC-CCccceEEEECCCCHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHcCCchhhHHHHHH
Confidence 99999999 999 9999999876555667787 565544321 011238999999999999
Q ss_pred HHHHHHHhhccC--------CcchhhhhccCcceeEEEEEeCCC
Q psy1213 433 VHAANRLVREDG--------QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 433 ~e~v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
.+++.+=+ +.| ++.|..+++.|-.-.+++|+..|.
T Consensus 363 ~~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~~ 405 (406)
T 2d3m_A 363 DEMRRKSA-AKGLETYGEGLEWGVLLGFGPGITVETILLHSLPL 405 (406)
T ss_dssp HHHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHhcc-ccCCCccCCCcceEEEEEeccchhhhhHHhhhccc
Confidence 88887655 445 677776666555567788887653
No 60
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.89 E-value=1.2e-23 Score=239.25 Aligned_cols=308 Identities=12% Similarity=0.073 Sum_probs=211.8
Q ss_pred ccceeeeeecccCCCCccccccccc-----CCceE---------EEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKT-----GKNIV---------FVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~-----~~~~~---------Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
.+..|.|+|+|+|++.++|+++.+. ..+.| |.+ +|++.+|.....+.
T Consensus 602 ~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~--~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~ 679 (979)
T 3tsy_A 602 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICD--KSMIKKRYIHLTEEMLEEHPNIGAYMAPSLN 679 (979)
T ss_dssp SCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHH--HTCCCEEECSCCHHHHHHCHHHHSSSSCCHH
T ss_pred CCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHH--hcCcceeeEecChhhhhcCcccccccCCCHH
Confidence 3567999999999999999887765 12444 544 78887764332222
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCC-CceeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDK-TPAHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~-~~~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.|++++..+ ...|..+..++..+|++.. .++++++++|+|+++||
T Consensus 680 ~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al 758 (979)
T 3tsy_A 680 IRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSG-VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVL 758 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHH
Confidence 2667999999999999999999999999998544 4568899999999999622 35899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.++..... ... .
T Consensus 759 ~~A~~~i~sG~~~~vLvvg~e~~~~~~~~------------------------------~~~-------------~---- 791 (979)
T 3tsy_A 759 RTAKDLAENNAGARVLVVCSEITVVTFRG------------------------------PSE-------------D---- 791 (979)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECTTTTCCC------------------------------CCS-------------S----
T ss_pred HHHHHHHHhCCCCEEEEEEEEecchheeC------------------------------CCc-------------c----
Confidence 99999999999999999999985421100 000 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
+.+ +..
T Consensus 792 ----------------------------------------------------------~~~----------------~~~ 797 (979)
T 3tsy_A 792 ----------------------------------------------------------ALD----------------SLV 797 (979)
T ss_dssp ----------------------------------------------------------CHH----------------HHH
T ss_pred ----------------------------------------------------------CHH----------------HHh
Confidence 000 001
Q ss_pred CCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc----cccc----------------cHHHHHHHHHHHc
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD----QLLL----------------GPAYATPQVLERA 360 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~----~~~~----------------~~~~a~~~Al~~A 360 (472)
+|+..+|||+|+||++.+.+..++........++......... .... ...++++++|+++
T Consensus 798 ~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~a 877 (979)
T 3tsy_A 798 GQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPL 877 (979)
T ss_dssp HHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhc
Confidence 2344799999999998765443333222223333322111000 0000 1357889999999
Q ss_pred CCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCC-CccccCCCCCcHHHHHHHHHHHH
Q psy1213 361 GLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGG-SLSIGHPFAATGVRLTVHAANRL 439 (472)
Q Consensus 361 gl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG-~~a~Ghp~gasG~~~v~e~v~qL 439 (472)
|++++|||+|.+|..+........+.|| +|.+++..+-- +--+||...||=...+.++..++
T Consensus 878 gl~~~did~~~~Hq~~~~i~~~~~~~lg-----------------l~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~ 940 (979)
T 3tsy_A 878 GISDWNSLFWIAHPGGPAILDAVEAKLN-----------------LDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKS 940 (979)
T ss_dssp TCCCGGGSEEEECCSCHHHHHHHHHHHT-----------------CCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHH
T ss_pred CCCCcccceEEECCCChHHHHHHHHHcC-----------------CChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhh
Confidence 9999999999999999987767778888 56665543200 12379999999888888887766
Q ss_pred hhcc-C------CcchhhhhccCcceeEEEEEeCCCC
Q psy1213 440 VRED-G------QFGLIAACAAGGQGVGMIIERHPDA 469 (472)
Q Consensus 440 ~~~~-g------~~gl~~~~~~GG~~~a~~l~~~~~~ 469 (472)
+... - ..+|..+++.|-.-.+++|+-.++.
T Consensus 941 ~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~~ 977 (979)
T 3tsy_A 941 LKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMV 977 (979)
T ss_dssp HHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBCC
T ss_pred cccccccCCCCcceeEEEEeCCchHHHHHHHHhcccc
Confidence 4221 1 1235555444444566777765543
No 61
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=99.87 E-value=2.1e-22 Score=207.38 Aligned_cols=307 Identities=14% Similarity=0.114 Sum_probs=213.0
Q ss_pred ccccceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC----------------
Q psy1213 19 TITNMSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN---------------- 68 (472)
Q Consensus 19 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~---------------- 68 (472)
...+..|.+++.|+|++.++|+.+.+... ..||.. +|++.+|....++
T Consensus 31 ~~~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~ 108 (413)
T 2p0u_A 31 AVGPATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICD--KSGIKKRHFYLDQKILESNPAMCTYMETS 108 (413)
T ss_dssp CSSCCEEEEEEEECCSEEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--TSSCSEEEESCCHHHHHTCGGGGSSSSSC
T ss_pred CCCCeEEEEEEeeCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHH--hcCcCceeEeeChhhhccCcccccccCCC
Confidence 33457799999999999999977764320 235654 7888876533333
Q ss_pred ---------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHH
Q psy1213 69 ---------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQ 138 (472)
Q Consensus 69 ---------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~ 138 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...+.++..++..+|++...+ +++++.+|+|+++
T Consensus 109 ~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId~li~~t~~~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~ 187 (413)
T 2p0u_A 109 LNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG-VNMPGAELATAKLLGLRPNVRRVMMYQQGAFAGAT 187 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCCEEEEEecCC-cccCcHHHHHHHHhCCCCCcceEeEECCccHHHHH
Confidence 47799999999999999999999999999999877 456788999999999974455 8999999999999
Q ss_pred HHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCch
Q psy1213 139 GITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETM 218 (472)
Q Consensus 139 al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (472)
||..|.++|++|.+++|||+|+|.+|..... |. + .
T Consensus 188 AL~~A~~~i~sg~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d----~-- 222 (413)
T 2p0u_A 188 VLRVAKDLAENNAGARVLAICSEVTAVTFRA-------------------------------------PS--E----T-- 222 (413)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEEECSTTTCCC-------------------------------------CC--T----T--
T ss_pred HHHHHHHHHHhCCCCEEEEEEEhhcchhccC-------------------------------------CC--c----c--
Confidence 9999999999999999999999997642100 00 0 0
Q ss_pred hHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCcee
Q psy1213 219 GHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVT 298 (472)
Q Consensus 219 ~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~ 298 (472)
++ ++
T Consensus 223 ------------------------------------------~~------------------~~---------------- 226 (413)
T 2p0u_A 223 ------------------------------------------HI------------------DG---------------- 226 (413)
T ss_dssp ------------------------------------------CH------------------HH----------------
T ss_pred ------------------------------------------Ch------------------hh----------------
Confidence 00 00
Q ss_pred ccCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCc--c------------cccc--------cHHHHHHH
Q psy1213 299 AANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPK--D------------QLLL--------GPAYATPQ 355 (472)
Q Consensus 299 ~~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~--~------------~~~~--------~~~~a~~~ 355 (472)
...+...+|||+|+||.+.+.. +. .+...+.+.+....... . .+.. ....++++
T Consensus 227 ~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 303 (413)
T 2p0u_A 227 LVGSALFGDGAAAVIVGSDPRP---GIERPIYEMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKD 303 (413)
T ss_dssp HHHHHHBCCEEEEEEEESSCCT---TTCCCSEEEEEEEEEECTTCTTSSEEEEETTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hcccceeecccEEEEEecCCCc---cccCCceEEEecccEEeCCChhhcCceEecCceEEEeccHHHHHHHHHHHHHHHH
Confidence 0011227999999999865421 21 12235555443211000 0 0000 11457789
Q ss_pred HHHHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHH
Q psy1213 356 VLERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 356 Al~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~ 433 (472)
+|+++|++ .+|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...|+-...+.
T Consensus 304 ~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~ 365 (413)
T 2p0u_A 304 TKNLVGASSWNEL-FWAVHPGGPAILDQVEAKLE-----------------LEKGKFQASRDILSDYGNMSSASVLFVLD 365 (413)
T ss_dssp HHHHTTCCSGGGS-EEEECCSSHHHHHHHHHHTT-----------------CCGGGGHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHHcCCCCccce-EEEECCCCHHHHHHHHHHhC-----------------CCHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence 99999998 7888 89999888765555667888 565554321 0012379999999999998
Q ss_pred HHHHHHhhccC--------CcchhhhhccCcceeEEEEEeCCCCCC
Q psy1213 434 HAANRLVREDG--------QFGLIAACAAGGQGVGMIIERHPDATA 471 (472)
Q Consensus 434 e~v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~~~~~ 471 (472)
+++.+-+ +.| ++.|..+++.|-.-.+++|+..|.-.|
T Consensus 366 ~~~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~~~~~ 410 (413)
T 2p0u_A 366 RVRERSL-ESNKSTFGEGSEWGFLIGFGPGLTVETLLLRALPLQQA 410 (413)
T ss_dssp HHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBCCCC
T ss_pred HHHHhcc-ccCCcccCCCcceEEEEEeCccceeeeeeEEEeccccc
Confidence 8887765 445 667666555444456788887765543
No 62
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=99.87 E-value=2.5e-22 Score=206.16 Aligned_cols=303 Identities=12% Similarity=0.091 Sum_probs=210.2
Q ss_pred ccceeeeeecccCCCCcccccccccC--------------CceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG--------------KNIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~--------------~~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.++++|+|++.++|+++.+.. ...||.. +|++.+|+...++
T Consensus 20 ~~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~p~~~d~~~~~~~ 97 (402)
T 1ee0_A 20 GLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICE--KTAIKKRYLALTEDYLQENPTMCEFMAPSLN 97 (402)
T ss_dssp CCCEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHH--HTCCCEEECSCCHHHHHHSGGGGSTTSSCHH
T ss_pred CCcEEEEeeecCCCcccCHHHHHHHHHHhhcccchhhhHHHHHHHHH--hcCccceeEecCchhhccCcccccccCCCHH
Confidence 45679999999999999998776542 1135654 7888876543333
Q ss_pred -------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHHH
Q psy1213 69 -------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQGI 140 (472)
Q Consensus 69 -------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~al 140 (472)
++..+|+.+|+++||+++|+++++||.|++++.++. ..+.++..++..+|++... ++++++.+|+|+++||
T Consensus 98 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~-~~p~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al 176 (402)
T 1ee0_A 98 ARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGV-DMPGADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVL 176 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCC-EESCHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-CCChHHHHHHHHcCcCCCcceeeEECchhHHHHHHH
Confidence 477999999999999999999999999999987763 4577899999999997444 3999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.+++|||+|+|.+|... .
T Consensus 177 ~~A~~~i~~g~~~~vLvvg~E~~s~~~-~--------------------------------------------------- 204 (402)
T 1ee0_A 177 RLAKDLAENNKGSRVLIVCSEITAILF-H--------------------------------------------------- 204 (402)
T ss_dssp HHHHHHHHHSTTCCEEEEEEECGGGGC-C---------------------------------------------------
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhh-c---------------------------------------------------
Confidence 999999999999999999999876410 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
.|... +.+ +..
T Consensus 205 ---------------------------------------~~~d~--------------~~~----------------~~~ 215 (402)
T 1ee0_A 205 ---------------------------------------GPNEN--------------HLD----------------SLV 215 (402)
T ss_dssp ---------------------------------------CCCTT--------------CHH----------------HHH
T ss_pred ---------------------------------------CCccc--------------chh----------------hhc
Confidence 00000 000 001
Q ss_pred CCCCcCcceeeeeecCHHHHHHcC-CCCcEEEEEeEEeccCCcc---------------cccc--------cHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLG-LKPKAYLRDFVYVSQDPKD---------------QLLL--------GPAYATPQV 356 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g-~~~~a~I~g~~~~~~~p~~---------------~~~~--------~~~~a~~~A 356 (472)
.+...+|||+|+||.+.+. .+ ..+..++.+.+.... |.. .+.. ....+++++
T Consensus 216 ~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 291 (402)
T 1ee0_A 216 AQALFGDGAAALIVGSGPH---LAVERPIFEIVSTDQTIL-PDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKA 291 (402)
T ss_dssp HTTTBCCEEEEEEEESSCC---TTTCCCCEEEEEEEEEEC-TTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHH
T ss_pred cceeEecceEEEEEecCCC---ccccCCceEEEeeeeEEc-CCchHhcCceeccCceEEEecchHHHHHHHHHHHHHHHH
Confidence 2233799999999986542 12 122245555543221 110 0000 113577899
Q ss_pred HHHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHH
Q psy1213 357 LERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVH 434 (472)
Q Consensus 357 l~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e 434 (472)
|+++|++ .+|| +|=+|-......-...+.|| +|.+++..+ --+--+||...|+-...+.+
T Consensus 292 L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~~ 353 (402)
T 1ee0_A 292 LSPLGITDWNSV-FWMVHPGGRAILDQVERKLN-----------------LKEDKLRASRHVLSEYGNLISACVLFIIDE 353 (402)
T ss_dssp HGGGTCCCGGGS-EEEECCSSHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHcCCCccccc-eEEECCCCHHHHHHHHHHcC-----------------CChHHhHHHHHHHHhcCCchhhHHHHHHHH
Confidence 9999998 8888 88899887755445567787 565554321 00123899999999999988
Q ss_pred HHHHHhhccC--------CcchhhhhccCcceeEEEEEeCCCCC
Q psy1213 435 AANRLVREDG--------QFGLIAACAAGGQGVGMIIERHPDAT 470 (472)
Q Consensus 435 ~v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~~~~ 470 (472)
++.+=+ +.| ++.|..+++.|-.-.+++|+..|..+
T Consensus 354 ~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~~~ 396 (402)
T 1ee0_A 354 VRKRSM-AEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRVTA 396 (402)
T ss_dssp HHHHHH-HTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECBCC-
T ss_pred HHHhcc-ccCCCCCCCCcceEEEEEecCCcEEEEEEEEEecccc
Confidence 887655 444 66666555544345678888766543
No 63
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=99.87 E-value=1.8e-22 Score=206.24 Aligned_cols=300 Identities=12% Similarity=0.090 Sum_probs=208.3
Q ss_pred cceeeeeecccCCCCcccccccccC--------------CceEEEecccccccccCccCCC-------------------
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTG--------------KNIVFVDGVRTPFLLSGTDYAN------------------- 68 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~--------------~~~~Ivg~~~t~~~~~~~~~~~------------------- 68 (472)
+..|.+++.|+|++.++|+++.+.. .+.||.. +|++.+|+...++
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~ 89 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCE--NSRIEKRYLHVTEEILKENPNIAAYEATSLNV 89 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHH--TTTCCEEECSCCHHHHHHCHHHHSSSSSCHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHH--hCCCCceEEecChhhhccCcccccccCCCHHH
Confidence 4679999999999999997776542 0236655 7888876543333
Q ss_pred ------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHHH
Q psy1213 69 ------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGIT 141 (472)
Q Consensus 69 ------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al~ 141 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...+.++..++..+|++...+ +++++.+|+|+++||.
T Consensus 90 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~ 168 (387)
T 3a5r_A 90 RHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLR 168 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHH
Confidence 47789999999999999999999999999998775 345788999999999974343 8999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHH
Q psy1213 142 TGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHS 221 (472)
Q Consensus 142 ~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (472)
.|.++|++|.+++|||+|+|.+|....
T Consensus 169 ~A~~~i~~g~~~~vLvvg~e~~s~~~~----------------------------------------------------- 195 (387)
T 3a5r_A 169 LAKDIAENNKGARVLIVCSEMTTTCFR----------------------------------------------------- 195 (387)
T ss_dssp HHHHHHHHSTTCEEEEEEEECCTTTCC-----------------------------------------------------
T ss_pred HHHHHHHhCCCCEEEEEEEeccchhhc-----------------------------------------------------
Confidence 999999999999999999999764110
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccC
Q psy1213 222 ADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAAN 301 (472)
Q Consensus 222 a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~ 301 (472)
.|... .. + ....
T Consensus 196 --------------------------------------~~~d~---~~--~-------------------------~~~~ 207 (387)
T 3a5r_A 196 --------------------------------------GPSET---HL--D-------------------------SMIG 207 (387)
T ss_dssp --------------------------------------CCCSS---CC--S-------------------------STTH
T ss_pred --------------------------------------CCCcc---ch--h-------------------------hccc
Confidence 00000 00 0 0001
Q ss_pred CCCcCcceeeeeecCHHHHHHcC-CCCcEEEEEeEEeccCCcc---------------cccc--------cHHHHHHHHH
Q psy1213 302 SSFLTDGASACVIMTEAKAKQLG-LKPKAYLRDFVYVSQDPKD---------------QLLL--------GPAYATPQVL 357 (472)
Q Consensus 302 ~~~~~DGAAAvvL~s~e~A~~~g-~~~~a~I~g~~~~~~~p~~---------------~~~~--------~~~~a~~~Al 357 (472)
+...+|||+|+||.+.+.. + ..+..++.+.+.... |.. .+.. ....+++++|
T Consensus 208 ~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 283 (387)
T 3a5r_A 208 QAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIV-PESHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAF 283 (387)
T ss_dssp HHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEEC-TTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred cceeccceeEEEEecCCCc---cccCCceEEEeeeEEEe-CCChHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHH
Confidence 2227999999999865421 2 122245555443221 100 0000 1135778999
Q ss_pred HHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHH
Q psy1213 358 ERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 358 ~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+++|++ .+|| ++=+|-......-...+.|| +|.+++..+ --+--+||...|+-...+.++
T Consensus 284 ~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 284 TPLNISDWNSL-FWIAHPGGPAILDQVTAKVG-----------------LEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp GGGTCCCGGGS-EEEECCSCHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HhcCCCChhhe-eEEECCCCHHHHHHHHHHcC-----------------CChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 999998 8888 88899887655444556777 565544321 001238999999999999888
Q ss_pred HHHHhhccC--------CcchhhhhccCcceeEEEEEeCCC
Q psy1213 436 ANRLVREDG--------QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 436 v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+.+=+ +.| ++.|..+++.|-.-.+++|+..|-
T Consensus 346 ~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 385 (387)
T 3a5r_A 346 RKKSL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVPV 385 (387)
T ss_dssp HHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHhcc-ccCCCCCCCCcceEEEEEecCcceeeehhheeccc
Confidence 87755 444 666666555444456788887653
No 64
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.87 E-value=6.4e-22 Score=240.57 Aligned_cols=269 Identities=17% Similarity=0.191 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCccC----EEEEEeecCCCC-------------------CChHHHHHHHHcCCCCCCceee
Q psy1213 72 HELARHSLIGILQKTGISKDLID----YIVYGTVIQEVK-------------------TSNIGREAALSAGFSDKTPAHT 128 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id----~vi~g~~~~~~~-------------------~~~~a~~ia~~lGl~~~~~~~~ 128 (472)
..|+++++++||+|||+++++++ +|++|+...++. ....+.+++..+|+ ++|+++
T Consensus 79 ~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l--~Gps~t 156 (2512)
T 2vz8_A 79 LRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDF--KGPSIT 156 (2512)
T ss_dssp HHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTC--CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCC--CCCcee
Confidence 45899999999999999987765 788987654320 12367899999999 699999
Q ss_pred ecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCccc
Q psy1213 129 VTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPA 208 (472)
Q Consensus 129 v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (472)
|+++|+|++.||++|++.|++|+||.+||+|++.+.. |... ..+.
T Consensus 157 v~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~-p~~~-----~~~~----------------------------- 201 (2512)
T 2vz8_A 157 IDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLK-PNSS-----LQFM----------------------------- 201 (2512)
T ss_dssp EECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCC-HHHH-----HHHH-----------------------------
T ss_pred eccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccC-HHHH-----HHHc-----------------------------
Confidence 9999999999999999999999999999999997542 1100 0000
Q ss_pred ccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCC
Q psy1213 209 VAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKP 288 (472)
Q Consensus 209 ~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p 288 (472)
+.|.+ .|.. ..++|+.+
T Consensus 202 -------------------------------------------~~~~l---s~~g-~c~~Fd~~---------------- 218 (2512)
T 2vz8_A 202 -------------------------------------------KLGML---SQDG-TCRSFDAE---------------- 218 (2512)
T ss_dssp -------------------------------------------HTTCB---CTTC-SCCSSSTT----------------
T ss_pred -------------------------------------------cCCCC---CCCC-CCCCCCCC----------------
Confidence 00111 0110 11344322
Q ss_pred cccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCc--c---cccccHHHHHHHHHHHcCCC
Q psy1213 289 AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK--D---QLLLGPAYATPQVLERAGLS 363 (472)
Q Consensus 289 ~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~--~---~~~~~~~~a~~~Al~~Agl~ 363 (472)
.+|.+ ++||++++||.+.+.|+ ++++.|+|++...+... . +...+..+++++||++||++
T Consensus 219 ----adG~~-------~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~ 283 (2512)
T 2vz8_A 219 ----GTGYC-------RAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPD 283 (2512)
T ss_dssp ----CCCBC-------BBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSC
T ss_pred ----CCCcc-------eeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 35666 89999999999999885 48999999999876421 1 11234578999999999999
Q ss_pred cCCcCEEEccCcchHH-HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCcc-ccCCCCCcHHHHHHHHHHHHhh
Q psy1213 364 LSDIDAWEVHEAFAGQ-ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLS-IGHPFAATGVRLTVHAANRLVR 441 (472)
Q Consensus 364 ~~dId~~e~hd~f~~~-~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a-~Ghp~gasG~~~v~e~v~qL~~ 441 (472)
|+||||+|.|.+.|.. +.++++++... |+. .+. -| +- -|..++ +||..+|+|+..++.+++.|++
T Consensus 284 p~~i~yveaHGTgT~~gD~~E~~al~~~-f~~---~~~-----~~---~~-igS~Ks~iGH~~~AaG~~~~ik~~l~l~~ 350 (2512)
T 2vz8_A 284 PESLEYIEAHGTGTKVGDPQELNGIVNA-LCA---TRR-----EP---LL-IGSTKSNMGHPEPASGVAALIKVLLSLEH 350 (2512)
T ss_dssp TTSCCEEECCCCCCTTHHHHHHHHHHHH-HCS---CSS-----SC---CE-EECHHHHHCBCGGGHHHHHHHHHHHHHTT
T ss_pred HHHCCEEEeecCCCCCCCHHHHHHHHHH-hcc---cCC-----CC---ce-eecccccccccccccchhHHHHHHHHHHC
Confidence 9999999999999964 66666666522 321 100 12 22 234444 8999999999999999999986
Q ss_pred cc--------------------------------CCcchhhhhccCcceeEEEEEeCCC
Q psy1213 442 ED--------------------------------GQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 442 ~~--------------------------------g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
+- .++.++++++.||.|+++||+..+.
T Consensus 351 ~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~~ 409 (2512)
T 2vz8_A 351 GVWAPNLHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNSR 409 (2512)
T ss_dssp TBCCCCSSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEECCC
T ss_pred CCcCCCCCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccCCc
Confidence 41 1356778899999999999997653
No 65
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=99.87 E-value=3.4e-22 Score=204.38 Aligned_cols=301 Identities=12% Similarity=0.081 Sum_probs=208.7
Q ss_pred ccceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.|++.|+|++.++|+.+.+... +.||.. +|++.+|+...++
T Consensus 15 ~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~ 92 (389)
T 1i88_A 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCD--KSMIKRRYMYLTEEILKENPNVCEYMAPSLD 92 (389)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--HSCCCEEECSCCHHHHHHCHHHHSSSCSCHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhcccccchhHHHHHHHHHH--hCCCCceeeecChhhhccCcchhcccCCChH
Confidence 456799999999999999987765420 236654 7888876543333
Q ss_pred -------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 69 -------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 69 -------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...+.++..++..+|++...+ +++++.+|+|+++||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al 171 (389)
T 1i88_A 93 ARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG-VDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVL 171 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCC-CCCchHHHHHHHHcCcCCCchhheeECCccHHHHHHH
Confidence 47789999999999999999999999999998876 346788999999999974355 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.+|..-.. |. +
T Consensus 172 ~~A~~~i~~g~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d--------- 203 (389)
T 1i88_A 172 RLAKDLAENNKGARVLVVCSEVTAVTFRG-------------------------------------PS--D--------- 203 (389)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECGGGTCCC-------------------------------------CC--T---------
T ss_pred HHHHHHHHcCCCCEEEEEEEecccHhHcC-------------------------------------cc--c---------
Confidence 99999999999999999999987641000 00 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
..++ +. .
T Consensus 204 ----------~~~~-----------------------------------------------~~----------------~ 210 (389)
T 1i88_A 204 ----------THLD-----------------------------------------------SL----------------V 210 (389)
T ss_dssp ----------TCHH-----------------------------------------------HH----------------H
T ss_pred ----------cccc-----------------------------------------------cc----------------c
Confidence 0000 00 0
Q ss_pred CCCCcCcceeeeeecCHHHHHHcC-CCCcEEEEEeEEeccCCc--c------------cccc--------cHHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLG-LKPKAYLRDFVYVSQDPK--D------------QLLL--------GPAYATPQVL 357 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g-~~~~a~I~g~~~~~~~p~--~------------~~~~--------~~~~a~~~Al 357 (472)
.+...+|||+|+||.+.+.. + ..+..++.+.+....... . .+.. ....+++++|
T Consensus 211 ~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 287 (389)
T 1i88_A 211 GQALFGDGAAALIVGSDPVP---EIEKPIFEMVWTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAF 287 (389)
T ss_dssp HHHHBCCEEEEEEEESSCCT---TTSCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred ccceEecceEEEEEecCCCC---ccCCCceEEEeeeeEEcCCCcccceeEEecCceEEEeccHHHHHHHHHHHHHHHHHH
Confidence 01127999999999865421 2 112235555443211000 0 0000 1135678999
Q ss_pred HHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHH
Q psy1213 358 ERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 358 ~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+++|++ .+|| +|=+|-......-...+.|| +|.+++..+ --+--+||...|+-...+.++
T Consensus 288 ~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lg-----------------l~~ek~~~~~~~l~~~GNtssAsi~~~L~~~ 349 (389)
T 1i88_A 288 EPLGISDYNSI-FWIAHPGGPAILDQVEQKLA-----------------LKPEKMNATREVLSEYGNMSSACVLFILDEM 349 (389)
T ss_dssp GGGTCCCTTSS-EEEECCSCHHHHHHHHHHHT-----------------CCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HhcCCCchhhc-eEEECCCcHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCCchhhHHHHHHHHH
Confidence 999998 8888 89999888765555567787 565544321 001238999999999999888
Q ss_pred HHHHhhccC--------CcchhhhhccCcceeEEEEEeCC
Q psy1213 436 ANRLVREDG--------QFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 436 v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+.+=+ +.| ++.|..+++.|-.-.+++|+..|
T Consensus 350 ~~~g~-~~G~~~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 388 (389)
T 1i88_A 350 RKKST-QNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 388 (389)
T ss_dssp HHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhcc-ccCCcccCCCCceEEEEEecCccEEEEEEEEecC
Confidence 87755 444 66666655544445677888765
No 66
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=99.87 E-value=1.7e-22 Score=206.95 Aligned_cols=294 Identities=13% Similarity=0.056 Sum_probs=204.6
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++++.+.+... +.||.. ++++.+|....++++..+|+.+|+++||++ +++++||.|+++
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~~~~~~~i~~--~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~ 77 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLI--GIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVA 77 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHTTSCHHHHHT--TTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEE
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHhCCCHHHHhh--hcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEE
Confidence 35799999999999999988775442 345543 677776654446789999999999999988 789999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHH
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLL 179 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~ 179 (472)
+.++....++++..++..+|++..+++++++++|+|+..||..|.++|++|.++++||+|+|. +....
T Consensus 78 t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~~----------- 145 (396)
T 1xpm_A 78 TESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYGL----------- 145 (396)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCCT-----------
T ss_pred eCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hcccc-----------
Confidence 988876678899999999999745899999999999999999999999999999999999996 22100
Q ss_pred hhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhHHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCC
Q psy1213 180 RANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDI 259 (472)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~ 259 (472)
+
T Consensus 146 -------------------------------~------------------------------------------------ 146 (396)
T 1xpm_A 146 -------------------------------N------------------------------------------------ 146 (396)
T ss_dssp -------------------------------T------------------------------------------------
T ss_pred -------------------------------C------------------------------------------------
Confidence 0
Q ss_pred ccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceeccCCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEec-
Q psy1213 260 LPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS- 338 (472)
Q Consensus 260 ~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~- 338 (472)
. + ++...+|||+|+||.+.+ .++....+.+...
T Consensus 147 -~-------------------------------~-------~~~~~GdGA~A~vl~~~~-------~i~~~~~~~g~~~~ 180 (396)
T 1xpm_A 147 -S-------------------------------G-------GEPTQGAGAVAMVIAHNP-------SILALNEDAVAYTE 180 (396)
T ss_dssp -C-------------------------------S-------SGGGCEEEEEEEEEEESC-------SSEEECSCCEEEEC
T ss_pred -C-------------------------------C-------CCcccccceEEEEeccCC-------ceEEEEeccccccc
Confidence 0 0 011279999999998631 2334444433322
Q ss_pred c-----CCcc---ccccc----------HHHHHHHHHHHcCCCcCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCC
Q psy1213 339 Q-----DPKD---QLLLG----------PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400 (472)
Q Consensus 339 ~-----~p~~---~~~~~----------~~~a~~~Al~~Agl~~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~ 400 (472)
+ .|.. ....+ ...+++.+|+++|++++|||+|-.|.+++.......+.|. ... .
T Consensus 181 d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~~~~~~~~l~----~~~-~--- 252 (396)
T 1xpm_A 181 DVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKMGKKALESII----DNA-D--- 252 (396)
T ss_dssp CCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHHHHHHHHTTG----GGS-C---
T ss_pred eEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHHHHHHHHHHH----hhc-c---
Confidence 1 1211 00011 3567899999999999999999999999876555566661 000 0
Q ss_pred ccCCCCCCCCc--CC--CC-CCccccCCCCCcHHHHHHHHHHHHhhccCCcchhhhhccCcceeEEEEEeCCC
Q psy1213 401 SKVGVPDLNKF--NN--WG-GSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 401 ~~~G~~p~~~v--N~--~G-G~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
| +|.+++ |+ += =+--+||...||-...+.+++.+=+-+.|++.+..+.+.|-...+++++..++
T Consensus 253 ---~-~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~~~l~~Gd~ill~s~GsG~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 253 ---E-TTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLENRDLQAGETIGLFSYGSGSVGEFYSATLVEG 321 (396)
T ss_dssp ---H-HHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHHSCCCTTCEEEEEEEETTTEEEEEEEEECTT
T ss_pred ---c-CCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEECcchhheEEEEEEccc
Confidence 0 121111 11 00 01237899988888888887765222357777776555443345567776554
No 67
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=99.87 E-value=9.1e-22 Score=201.18 Aligned_cols=304 Identities=15% Similarity=0.094 Sum_probs=207.9
Q ss_pred ccceeeeeecccCCCCcccccccccC-----CceE---------EEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG-----KNIV---------FVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~-----~~~~---------Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
....|.|+|+|+|++.++|+.+.+.. .+.| |.. +|++.+|....+++
T Consensus 15 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 92 (393)
T 3ov2_A 15 GPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCE--KTMVKKRYLHLTEEILKERPKLCSYKEASFD 92 (393)
T ss_dssp SCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--HTCCCEEECSCCHHHHHHSGGGGSSSSCCHH
T ss_pred CCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHH--hcCCceEEeecChhhhccCcccccCCCCCHH
Confidence 45679999999999999998877642 2444 544 78888776443332
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.||+++.++ ...|.++..++..||++...+ +++++.+|+|+++||
T Consensus 93 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al 171 (393)
T 3ov2_A 93 DRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAML 171 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHH
Confidence 4789999999999999999999999999999888 557889999999999974333 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.++++||+|+|.+|..-.. |. + .
T Consensus 172 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d----~---- 204 (393)
T 3ov2_A 172 RIAKDLAENNRGARVLVVACEITVLSFRG-------------------------------------PN--E----G---- 204 (393)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECGGGTCCC-------------------------------------CC--T----T----
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhccC-------------------------------------Cc--c----c----
Confidence 99999999999999999999998521000 00 0 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
+.+++ .
T Consensus 205 ----------------------------------------------------------~~~~~----------------~ 210 (393)
T 3ov2_A 205 ----------------------------------------------------------DFEAL----------------A 210 (393)
T ss_dssp ----------------------------------------------------------CHHHH----------------H
T ss_pred ----------------------------------------------------------chhhh----------------c
Confidence 00000 0
Q ss_pred CCCCcCcceeeeeecCHHHHHHcCCCCcEEEEEeEEeccCCcc--------------cccc--------cHHHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD--------------QLLL--------GPAYATPQVLE 358 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g~~~~a~I~g~~~~~~~p~~--------------~~~~--------~~~~a~~~Al~ 358 (472)
.|...+|||+|+||...+.. .. ..+...+...+........ .+.. ....+++.+|+
T Consensus 211 ~~~lFGDGAaA~vl~~~~~~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 288 (393)
T 3ov2_A 211 GQAGFGDGAGAVVVGADPLE-GI-EKPIYEIAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALA 288 (393)
T ss_dssp HHHHBCCEEEEEEEESSCCT-TT-CCCSEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHG
T ss_pred ccccccCccEEEEEEecCCC-cc-cCceeEEEecCcEEecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 12227999999999875421 11 1222334333321110000 0001 11467899999
Q ss_pred HcCCCc-CCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHHH
Q psy1213 359 RAGLSL-SDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHAA 436 (472)
Q Consensus 359 ~Agl~~-~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~v 436 (472)
++|+++ +|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...||=...+.+++
T Consensus 289 ~~gl~~~~di-~~v~Hq~n~~i~~~v~~~Lg-----------------l~~ek~~~s~~~l~~~GNtssAsip~~L~~~~ 350 (393)
T 3ov2_A 289 PLGVREWNDV-FWVAHPGNWAIIDAIEAKLQ-----------------LSPDKLSTARHVFTEYGNMQSATVYFVMDELR 350 (393)
T ss_dssp GGTCCSGGGS-EEEECCCCHHHHHHHHHHHT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HcCCCcccCc-EEEECCCChHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHhCChHHhHHHHHHHHHH
Confidence 999997 888 88889888766666678888 565554321 0012378999888888887777
Q ss_pred HHH-h-hc--cC---CcchhhhhccCcceeEEEEEeCCC
Q psy1213 437 NRL-V-RE--DG---QFGLIAACAAGGQGVGMIIERHPD 468 (472)
Q Consensus 437 ~qL-~-~~--~g---~~gl~~~~~~GG~~~a~~l~~~~~ 468 (472)
.+. + ++ .| ++.|..+++.|-.-.++||++.|-
T Consensus 351 ~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 351 KRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp HHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 652 1 11 23 566666555444556788888754
No 68
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=99.86 E-value=2.9e-22 Score=204.47 Aligned_cols=141 Identities=10% Similarity=-0.014 Sum_probs=118.9
Q ss_pred ccceeeeeecccCCCCcccccccccC-----Cc---------eEEEecccccccccCccCCCC-----------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTG-----KN---------IVFVDGVRTPFLLSGTDYANM----------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~-----~~---------~~Ivg~~~t~~~~~~~~~~~~----------------- 69 (472)
....|.|+|+|+|++.++|+.+.+.. .+ .||.. +|++.+|....+++
T Consensus 9 ~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~e~~~~~~~~~~~~~p~~~ 86 (387)
T 3oit_A 9 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQ--EMGVQRRYLHHTEEMLSAHPEFVDRDAPSLD 86 (387)
T ss_dssp SCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHH--TSSCCEEEESCCHHHHHHCGGGTCTTSCCHH
T ss_pred CCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHH--hcCcceeeeecCHHHhccCccccccCCCCHH
Confidence 55779999999999999987776542 11 15544 78888776443332
Q ss_pred --------CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 70 --------MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 70 --------~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
+..+|+.+|+++||+++|+++++||.||+++.++ ...|.++..++..+|++...+ +++++.+|+|+++||
T Consensus 87 ~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al 165 (387)
T 3oit_A 87 ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAAL 165 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHH
Confidence 5789999999999999999999999999999887 557889999999999974333 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccC
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMS 164 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s 164 (472)
..|..+|++|.++++||+|+|.+|
T Consensus 166 ~~A~~~i~sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 166 RLAKDLAENSRGARVLVVAAELTL 189 (387)
T ss_dssp HHHHHHHHSSTTCEEEEEEEECGG
T ss_pred HHHHHHHhcCCCCEEEEEEEeccc
Confidence 999999999999999999999986
No 69
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=99.86 E-value=4.5e-22 Score=204.90 Aligned_cols=300 Identities=14% Similarity=0.093 Sum_probs=208.6
Q ss_pred ccceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.+++.|+|++.++|+++.+... ..||.. +|++.+|+...++
T Consensus 37 ~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 114 (413)
T 1xes_A 37 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICE--RSAIKQRYMYLTEEILKKNPDVCAFVEVPSL 114 (413)
T ss_dssp SCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHH--TSCCCEEECSCCHHHHHTCHHHHSSSSSCCH
T ss_pred CCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHh--hcCcCceEEeeChhhhccCccccccccCCCH
Confidence 456799999999999999987765320 236654 8888876543332
Q ss_pred --------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-ceeeecccCccHHHH
Q psy1213 69 --------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-PAHTVTMACISSNQG 139 (472)
Q Consensus 69 --------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-~~~~v~~~Casg~~a 139 (472)
++..+|+.+|+++||+++|+++++||.|++++.++ ...++++..++..+|++... ++++++.+|+|+++|
T Consensus 115 ~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~A 193 (413)
T 1xes_A 115 DARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTV 193 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHH
Confidence 26789999999999999999999999999998877 34578899999999997434 389999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchh
Q psy1213 140 ITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219 (472)
Q Consensus 140 l~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (472)
|..|.++|++|.++++||+|+|.+|..... |. + .
T Consensus 194 L~~A~~~i~~G~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d----~--- 227 (413)
T 1xes_A 194 LRMAKDLAENNRGARVLVICSETTAVTFRG-------------------------------------PS--E----T--- 227 (413)
T ss_dssp HHHHHHHHHTSTTCCEEEEEEECTTTTCCC-------------------------------------CC--T----T---
T ss_pred HHHHHHHHHcCCCCEEEEEEehhhhhhhcC-------------------------------------CC--c----c---
Confidence 999999999999999999999997641100 00 0 0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceec
Q psy1213 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTA 299 (472)
Q Consensus 220 ~~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~ 299 (472)
++ ++ .
T Consensus 228 -----------------------------------------~~------------------~~----------------~ 232 (413)
T 1xes_A 228 -----------------------------------------HL------------------DS----------------L 232 (413)
T ss_dssp -----------------------------------------CH------------------HH----------------H
T ss_pred -----------------------------------------ch------------------hh----------------c
Confidence 00 00 0
Q ss_pred cCCCCcCcceeeeeecCHHHHHHcCC-CCcEEEEEeEEeccCCcc---------------cccc--------cHHHHHHH
Q psy1213 300 ANSSFLTDGASACVIMTEAKAKQLGL-KPKAYLRDFVYVSQDPKD---------------QLLL--------GPAYATPQ 355 (472)
Q Consensus 300 ~~~~~~~DGAAAvvL~s~e~A~~~g~-~~~a~I~g~~~~~~~p~~---------------~~~~--------~~~~a~~~ 355 (472)
..+...+|||+|+||.+.+.. +. .+..++.+.+.... |.. .+.. ....++++
T Consensus 233 ~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 308 (413)
T 1xes_A 233 VGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVV-PNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVE 308 (413)
T ss_dssp HHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEEC-TTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred ccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEc-CCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHH
Confidence 011127999999999865421 21 12245665544211 100 0000 11457789
Q ss_pred HHHHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHH
Q psy1213 356 VLERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTV 433 (472)
Q Consensus 356 Al~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~ 433 (472)
+|+++|++ .+|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...|+-...+.
T Consensus 309 ~L~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~Lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~ 370 (413)
T 1xes_A 309 AFSQFKISDWNKL-FWVVHPGGRAILDRVEAKLN-----------------LDPTKLIPTRHVMSEYGNMSSACVHFILD 370 (413)
T ss_dssp HHGGGTCCCGGGS-EEEECCSCHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHH
T ss_pred HHHhcCCCCccce-eEEECCCCHHHHHHHHHHcC-----------------CChHHhHHHHHHHHhcCcCchhhHHHHHH
Confidence 99999998 8888 78889887655445567787 565554321 0012389999999999998
Q ss_pred HHHHHHhhccC--------CcchhhhhccCcceeEEEEEeCC
Q psy1213 434 HAANRLVREDG--------QFGLIAACAAGGQGVGMIIERHP 467 (472)
Q Consensus 434 e~v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~~ 467 (472)
+++.+=+ +.| ++.|..+++.|-.-.++||+..|
T Consensus 371 ~~~~~g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~ 411 (413)
T 1xes_A 371 QTRKASL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 411 (413)
T ss_dssp HHHHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHhcc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEecc
Confidence 8887755 444 66666655544455678888765
No 70
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=99.86 E-value=8.7e-22 Score=202.10 Aligned_cols=300 Identities=14% Similarity=0.095 Sum_probs=207.3
Q ss_pred ccceeeeeecccCCCCcccccccccCC--------------ceEEEecccccccccCccCCC------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--------------NIVFVDGVRTPFLLSGTDYAN------------------ 68 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--------------~~~Ivg~~~t~~~~~~~~~~~------------------ 68 (472)
.+..|.+++.|+|++.++|+.+.+... +.||.. +|++.+|+...++
T Consensus 28 ~~~~I~g~g~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~a~~~~~~~~~p~~~~~~~~~~~ 105 (402)
T 3awk_A 28 GPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICD--KSGIKKRHFHLTDEILRKNPSICKFKEASLD 105 (402)
T ss_dssp SCEEEEEEEEECCSEEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHH--HSSCSEEEESCCHHHHHHSGGGGSSSSSCHH
T ss_pred CCeEEEEEEecCCCCccCHHHHHHHHHHhhcccchhhHHHHHHHHHH--hcCcCceEEeeChhhhccCcccccccCCChH
Confidence 457799999999999998877764320 235654 7888876543333
Q ss_pred -------CCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeecccCccHHHHH
Q psy1213 69 -------MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVTMACISSNQGI 140 (472)
Q Consensus 69 -------~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~~~Casg~~al 140 (472)
++..+|+.+|+++||+++|+++++||.|++++..+ ...+.++..++..+|++...+ +++++.+|+|+++||
T Consensus 106 ~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al 184 (402)
T 3awk_A 106 PRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG-VDMPGADFQLAKLLGLRPTVKRVMLYQQGAYAGATVL 184 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CcCChHHHHHHHHcCCCCccceeeEECCccHHHHHHH
Confidence 47799999999999999999999999999999877 456789999999999974455 899999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEeecccCCCcccchhhhHHHHHhhccCCCchhhhhhhhccCCCCCCCCcccccccccCCchhH
Q psy1213 141 TTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220 (472)
Q Consensus 141 ~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (472)
..|.++|++|.+++|||+|+|.+|..-.. |. +
T Consensus 185 ~~A~~~i~sg~~~~vLvvg~E~~s~~~~~-------------------------------------~~--d--------- 216 (402)
T 3awk_A 185 RVAKDLAENNKGARVLVACSEVTAVTFRA-------------------------------------PS--E--------- 216 (402)
T ss_dssp HHHHHHHHTSTTCEEEEEEEECTTTTCCC-------------------------------------CC--T---------
T ss_pred HHHHHHHHcCCCCEEEEEEEeccchhhcC-------------------------------------CC--c---------
Confidence 99999999999999999999997641100 00 0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHHHHHHHHHcCCCCCCccceeccceeeccCCCccCCHHHHhcCCCcccCCCCceecc
Q psy1213 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKLKPAFVKPHGSVTAA 300 (472)
Q Consensus 221 ~a~~~~~~~g~t~e~~~~~a~~~~~~a~~a~~~g~~~~~~P~a~~~~~~~~de~~~~~t~~~~~~~~p~~~~~~g~l~~~ 300 (472)
..+ ++. .
T Consensus 217 ----------~~~-----------------------------------------------~~~----------------~ 223 (402)
T 3awk_A 217 ----------THL-----------------------------------------------DGL----------------V 223 (402)
T ss_dssp ----------TCH-----------------------------------------------HHH----------------H
T ss_pred ----------cCH-----------------------------------------------HHh----------------h
Confidence 000 000 0
Q ss_pred CCCCcCcceeeeeecCHHHHHHcC-CCCcEEEEEeEEecc--CCcc------------ccccc--------HHHHHHHHH
Q psy1213 301 NSSFLTDGASACVIMTEAKAKQLG-LKPKAYLRDFVYVSQ--DPKD------------QLLLG--------PAYATPQVL 357 (472)
Q Consensus 301 ~~~~~~DGAAAvvL~s~e~A~~~g-~~~~a~I~g~~~~~~--~p~~------------~~~~~--------~~~a~~~Al 357 (472)
.+...+|||+|+||.+.+.. + ..+..++.+.+.... .... .+... ...+++++|
T Consensus 224 ~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 300 (402)
T 3awk_A 224 GSALFGDGAAALIVGSDPVP---QEEKPLFEIHWAGEAVLPDSDGAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPL 300 (402)
T ss_dssp HHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHTHHHH
T ss_pred ccccccCceEEEEEecCCCc---cccCCceEEEeeeEEeeCCCchhcceEEecCceEEEeCchHHHHHHHHHHHHHHHHH
Confidence 01127999999999865421 2 122245555443211 0000 00001 135678999
Q ss_pred HHcCCC-cCCcCEEEccCcchHHHHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCC-CCCccccCCCCCcHHHHHHHH
Q psy1213 358 ERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW-GGSLSIGHPFAATGVRLTVHA 435 (472)
Q Consensus 358 ~~Agl~-~~dId~~e~hd~f~~~~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~-GG~~a~Ghp~gasG~~~v~e~ 435 (472)
+++|++ .+|| +|=+|-......-...+.|| +|.+++-.+ --+--+||...|+-...+.++
T Consensus 301 ~~~gl~d~~di-~~v~Hq~~~~i~~~~~~~lg-----------------l~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 362 (402)
T 3awk_A 301 EYVHFPSYNDM-FWAVHPGGPAILDQIEAKLG-----------------LSTDKMQASRDVLASYGNMSSASVLFVLDQI 362 (402)
T ss_dssp HHTTCCCGGGE-EEEECCSCHHHHHHHHHHTT-----------------CCTTTTHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HhcCCCCccce-eEEECCCcHHHHHHHHHHcC-----------------CCHHHHHHHHHHHHHcCCchhhHHHHHHHHH
Confidence 999998 7777 78899887765445567788 565554321 001237999999999999888
Q ss_pred HHHHhhccC--------CcchhhhhccCcceeEEEEEeC
Q psy1213 436 ANRLVREDG--------QFGLIAACAAGGQGVGMIIERH 466 (472)
Q Consensus 436 v~qL~~~~g--------~~gl~~~~~~GG~~~a~~l~~~ 466 (472)
+.+=+ +.| ++.|..+++.|-.-.+++|+..
T Consensus 363 ~~~g~-~~G~~~~g~g~d~vll~~fG~G~t~~~~ll~~~ 400 (402)
T 3awk_A 363 RKNSE-ELHLPTTGEGFEWGFVIGFGPGLTVETLLLRSI 400 (402)
T ss_dssp HHHHH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred Hhhcc-ccCCCcCCCCcceEEEEEecccceeeeheeeec
Confidence 87655 444 6666665554444556788764
No 71
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=99.84 E-value=2e-20 Score=194.16 Aligned_cols=142 Identities=14% Similarity=0.083 Sum_probs=115.3
Q ss_pred ccceeeeeecccCCCCcccccccccCCc--------eE---EEecccccccccCccCCCC--------------------
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGKN--------IV---FVDGVRTPFLLSGTDYANM-------------------- 69 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~--------~~---Ivg~~~t~~~~~~~~~~~~-------------------- 69 (472)
.++.|.++++|+|++.++++.+....+. .+ |.. +|++.+|.....+.
T Consensus 30 ~~v~I~gigt~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~p~~~~~~~ps~~~r~~~~~ 107 (465)
T 3e1h_A 30 LGLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINR--YTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFM 107 (465)
T ss_dssp CCEEEEEEEEECCSSCCBCTHHHHHTCSSSCCCHHHHHHHHHTT--TSCCCCBCCSSCTTCGGGSSSSCCCHHHHHHHHH
T ss_pred CCEEEEEEEEECCCcEEcHHHHHHHHHHhcccchhHHHHHHHHH--hcCCceEEEeecccCcccccccCCCHHHHHHHHH
Confidence 4678999999999999999877433221 11 222 68887765432211
Q ss_pred -CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHH
Q psy1213 70 -MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLI 147 (472)
Q Consensus 70 -~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I 147 (472)
...+|+.+|+++||+++|+++++||.||+++++ +...|.++..++..||++....+++| +.+|+++++||..|.++|
T Consensus 108 ~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i 186 (465)
T 3e1h_A 108 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLC 186 (465)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHH
Confidence 135899999999999999999999999999877 55678899999999999743338999 799999999999999999
Q ss_pred Hc----CCCCEEEEEeecccCC
Q psy1213 148 AA----GAYDVVVAGGVEFMSD 165 (472)
Q Consensus 148 ~s----G~~d~vLv~G~e~~s~ 165 (472)
++ |.+++|||+|+|.+|.
T Consensus 187 ~a~~~~G~~~~vLVvg~E~~S~ 208 (465)
T 3e1h_A 187 LGHTARGKPARILVLALEVSTT 208 (465)
T ss_dssp HHHHHTTCCCEEEEEEEECCGG
T ss_pred hcccccCCCCEEEEEEEeecch
Confidence 97 9999999999999764
No 72
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=99.84 E-value=2.9e-21 Score=196.90 Aligned_cols=140 Identities=12% Similarity=0.043 Sum_probs=121.1
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++|+.+.+... +.||.. ++++.++....++++..+|+.+|+++||++++ +++||.|+++
T Consensus 7 ~v~I~~~g~y~P~~~v~~~~l~~~~g~~~~~~~~--~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~ 82 (388)
T 3v4n_A 7 TIGIDKISFFVPPYYIDMTALAEARNVDPGKFHI--GIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIVG 82 (388)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHTTSCTHHHHT--TTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred eEEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHH--HhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEE
Confidence 67899999999999999988876532 445432 56666655444678999999999999999987 9999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+.+++...+..+..++..||++..+++++++.+|+|+..||..|..+|++|.++.+||+|+|.++.
T Consensus 83 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~ 148 (388)
T 3v4n_A 83 TESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY 148 (388)
T ss_dssp CSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC
T ss_pred eccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc
Confidence 998887778899999999999744899999999999999999999999999999999999998753
No 73
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=99.83 E-value=1e-20 Score=192.54 Aligned_cols=141 Identities=13% Similarity=0.069 Sum_probs=113.5
Q ss_pred cceeeeeecccCCCCcccccccccCC-----ce------EEEecccccccccCccCCC---------------------C
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK-----NI------VFVDGVRTPFLLSGTDYAN---------------------M 69 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~-----~~------~Ivg~~~t~~~~~~~~~~~---------------------~ 69 (472)
++.|.|+++|+|++.++|+.+.+..+ +. +|.. +|++.+|...... +
T Consensus 2 ~v~I~~ig~~~P~~~v~~~e~~~~~~~~~~~~~~~~~~~~i~~--~tGI~~R~~~~~~~~~~~~~~~~~s~~~r~~~~~~ 79 (379)
T 3euo_A 2 GLSITGLGVQYPPYSLGPDAIDILSKRYHPESPAMKKVLAINR--YTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMS 79 (379)
T ss_dssp CCEEEEEEEECCSEEECTHHHHHHHHHHCCCCHHHHHHHHHTT--SSCCCCEEESSCTTCGGGSSSSCCCHHHHHHHHHH
T ss_pred ceEEEEEEeeCCCceeCHHHHHHHHHHhcccchhHHHHHHHHH--hCCcceeeeeecCcCcccccccCCCHHHHHHHHHH
Confidence 46789999999999998877643211 11 1322 5777776433211 2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-cccCccHHHHHHHHHHHHH
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~ 148 (472)
+..+|+.+|+++||+++|+++++||.||+++++ +...|.++..++..+|++....++++ +.+|+++++||..|.++|+
T Consensus 80 ~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~ 158 (379)
T 3euo_A 80 DGVPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCL 158 (379)
T ss_dssp HTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHH
Confidence 457999999999999999999999999999887 55678899999999999733338999 7999999999999999999
Q ss_pred c----CCCCEEEEEeecccCC
Q psy1213 149 A----GAYDVVVAGGVEFMSD 165 (472)
Q Consensus 149 s----G~~d~vLv~G~e~~s~ 165 (472)
+ |.++++||+|+|.+|.
T Consensus 159 a~~~~G~~~~vLvv~~E~~s~ 179 (379)
T 3euo_A 159 GHTARGKPARILVLALEVSTT 179 (379)
T ss_dssp HHHHTTCCCEEEEEEEECCGG
T ss_pred hccccCCCCEEEEEEEEeehh
Confidence 7 9999999999999764
No 74
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=99.83 E-value=5.7e-20 Score=191.08 Aligned_cols=139 Identities=8% Similarity=0.009 Sum_probs=117.6
Q ss_pred cceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCcc--CCCCCHHHHHHHHHHHHHHHcCCCcCccCEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTD--YANMMAHELARHSLIGILQKTGISKDLIDYIV 97 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~--~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi 97 (472)
++.|.++++|+|++.++++.+.+... +.|| +++++.+... .++++..+|+.+|+++||+++|+++++||.|+
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~g~~~~~~----~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li 78 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHDGASKGKY----TIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLE 78 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHTTCCTTTT----TTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ceEEEEEEEECCCeeccHHHHHHHhCCCHHHh----hhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEE
Confidence 57899999999999999988775543 3333 4444433222 25789999999999999999999999999999
Q ss_pred EEeecCCCCCChHHHHHHHHcCC--CCCCceeeecccCccHHHHHHHHHHHHHcCCC--CEEEEEeecccC
Q psy1213 98 YGTVIQEVKTSNIGREAALSAGF--SDKTPAHTVTMACISSNQGITTGIGLIAAGAY--DVVVAGGVEFMS 164 (472)
Q Consensus 98 ~g~~~~~~~~~~~a~~ia~~lGl--~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~s 164 (472)
+++.+++...+.++..++..+|+ +..+++++++++|+|+..||..|.++|++|.+ +++||+|+|.++
T Consensus 79 ~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~ 149 (450)
T 2f82_A 79 VGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV 149 (450)
T ss_dssp EECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC
T ss_pred EEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc
Confidence 99988877678899999999998 33789999999999999999999999999998 999999999763
No 75
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=99.82 E-value=5e-21 Score=196.75 Aligned_cols=140 Identities=11% Similarity=0.002 Sum_probs=120.4
Q ss_pred cceeeeeecccCCCCcccccccccC--CceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 22 NMSLKSICTSHNVYSPRKSVKDKTG--KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 22 ~~~~~~~~~~~p~~~~~~~~~~~~~--~~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
++.|.++++|+|++.++|+.+.+.. .+.||.. ++++.++....++++..+|+.+|+++||+++| +++||.|+++
T Consensus 36 ~v~I~~ig~ylP~~~v~n~el~~~~g~~~~~i~~--~~Gi~~r~~a~~~e~~~~La~~Aa~~aL~~ag--~~dId~li~~ 111 (425)
T 3sqz_A 36 RIGIDKIGFTSSQYVLNMKDLAEARGEDPQKFSK--GLLLNALSIAPITDDVVTLAAGSANEILTAED--KEKIDMVILA 111 (425)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHHTCCHHHHHT--TTCCCEEEECCTTSCHHHHHHHHHHTTCCHHH--HHHEEEEEEE
T ss_pred eEEEEEEEEECCCcEEcHHHHHHHhCCCHHHHHH--HcCeEEEEECCCCCCHHHHHHHHHHHHHHhCC--hhhCCEEEEE
Confidence 6789999999999999998887642 2445532 56676655444678999999999999999998 9999999999
Q ss_pred eecCCCCCChHHHHHHHHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 100 TVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 100 ~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
+.+++...+..+..++..||++..+++++++.+|+++..||..|..+|++|.++.+||+|+|.++.
T Consensus 112 t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~ 177 (425)
T 3sqz_A 112 TESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKY 177 (425)
T ss_dssp CSCCSCSSSCHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECC
T ss_pred ecccccccchHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcc
Confidence 988887778899999999999744899999999999999999999999999999999999998753
No 76
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=99.82 E-value=4.8e-20 Score=190.07 Aligned_cols=142 Identities=6% Similarity=-0.022 Sum_probs=121.5
Q ss_pred ccceeeeeecccCCCCcccccccccCCceEEEecccccccccC--ccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSG--TDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~Ivg~~~t~~~~~~--~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
++++|.|+++|+|++.++|+++.+....-|+. .+++++.++ ...++++..+|+.+|+++||+++|+++++||.|++
T Consensus 4 ~~vgI~gig~ylP~~~v~n~el~~~~g~~~~~--~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~Iiv 81 (460)
T 2v4w_A 4 KDVGILALEVYFPAQYVDQTDLEKYNNVEAGK--YTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHTTCCTTC--CCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCcEecHHHHHHHhCCCHHH--eeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 57889999999999999999888766533432 245555433 22346899999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCC--CCCCceeeecccCccHHHHHHHHHHHHHcCCC--CEEEEEeecccC
Q psy1213 99 GTVIQEVKTSNIGREAALSAGF--SDKTPAHTVTMACISSNQGITTGIGLIAAGAY--DVVVAGGVEFMS 164 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl--~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~s 164 (472)
++.+++...+..+..++..||+ ..++++++++.+|+++.+||..|..+|++|.+ +.+||+|+|.++
T Consensus 82 aT~t~~~~~ps~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~s 151 (460)
T 2v4w_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAV 151 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEEC
T ss_pred EecCCCCCCCcHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEeccccc
Confidence 9998888788899999999998 23678999999999999999999999999985 999999999864
No 77
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=179.14 Aligned_cols=139 Identities=10% Similarity=0.059 Sum_probs=114.8
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.++.|.++++|+|++.+.++.+.+... +.||+. .+++.++....++++..+|+.+|+++||+++|+++++||.|++
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~g~~~~~~~~--~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~ 100 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTI--GLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEV 100 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHHTCCTTCCCC--CCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCeEecHHHHHHHhCCChhHhec--ccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 468899999999999988877764332 223322 3444444333357899999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHH---HHcCCCCCCceeeecccCccHHHHHHHHHHHHHcCC--CCEEEEEeecc
Q psy1213 99 GTVIQEVKTSNIGREAA---LSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGA--YDVVVAGGVEF 162 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia---~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~--~d~vLv~G~e~ 162 (472)
++.++....+..+..++ ..+|++ .+++++++.+|+++..||..|..+|++|. ++++||+|+|.
T Consensus 101 ~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 101 GTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp ECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred EccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 99888766788899999 455565 78999999999999999999999999999 99999999994
No 78
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=99.77 E-value=5.6e-19 Score=180.98 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=101.8
Q ss_pred ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee
Q psy1213 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH 127 (472)
Q Consensus 48 ~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~ 127 (472)
+.||.. +|+|.+|+.... .+..+|+.+|+++||+++|+++++||.||++++++. ..|.++..++..+|++..++.+
T Consensus 117 ~e~i~~--rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~~P~~a~~v~~~LGl~~~~~~~ 192 (413)
T 3v7i_A 117 LKAVPA--SQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-ALPGLDVALANRLPLRGDTMLL 192 (413)
T ss_dssp HHTSCC--CCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-CSSCHHHHHHHHTTCCTTCEEE
T ss_pred ccceec--CCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-CcCHHHHHHHHHhCCCCCceEE
Confidence 557765 999998765433 478999999999999999999999999999998874 5788999999999997557889
Q ss_pred ee-cccCccHHHHHHHHHHHHHcCCCCEEEEEeecccCC
Q psy1213 128 TV-TMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165 (472)
Q Consensus 128 ~v-~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~ 165 (472)
++ +.+|+|+++||..|.++|++|.+++|||+|+|.+|.
T Consensus 193 ~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~ 231 (413)
T 3v7i_A 193 PATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST 231 (413)
T ss_dssp EESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred EeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence 99 999999999999999999999999999999999864
No 79
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=99.75 E-value=1.3e-17 Score=164.31 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=88.1
Q ss_pred cccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecccCcc
Q psy1213 56 RTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACIS 135 (472)
Q Consensus 56 ~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~~Cas 135 (472)
.+.|+++. .+++..+|+.+|+++||+++|++++|||.+++++.++. ...+..++..+|+ |+++|+++|+|
T Consensus 43 d~~fG~~t---~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q---~~~A~~va~~Lgi----pafdV~~ACsg 112 (347)
T 3lma_A 43 EMHCNQKN---WEMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ---NVTANYVARHLKI----PFLCLFGACST 112 (347)
T ss_dssp STTTTSSS---HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS---STTHHHHHHHHCC----CEEEBCCSTTH
T ss_pred ccccCCcC---ccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc---hhHHHHHHHHhCC----CEEEecChhHH
Confidence 45666532 24678899999999999999999999999999998772 2378888888864 69999999999
Q ss_pred HHHHHHHHHHHHHcCCCCEEEEEeecccCCCc
Q psy1213 136 SNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167 (472)
Q Consensus 136 g~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~ 167 (472)
++++|..|..+|++|.+++|||+|+|++|+.+
T Consensus 113 ~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~ae 144 (347)
T 3lma_A 113 SMESIAISSALIDGGFAKRALAATSSHNATAE 144 (347)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEECGGGTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccccchh
Confidence 99999999999999999999999999988643
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=99.71 E-value=2.3e-17 Score=171.94 Aligned_cols=138 Identities=10% Similarity=0.010 Sum_probs=120.5
Q ss_pred ccceeeeeecccCCCCcccccccccCC--ceEEEecccccccccCccCCCCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 21 TNMSLKSICTSHNVYSPRKSVKDKTGK--NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 21 ~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~Ivg~~~t~~~~~~~~~~~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
.|++|.++++|+|++.++|+++++... +.||.. +|++.+|+...+++++.+|+++|+++||+++|++|++||.|++
T Consensus 4 ~~VgI~~~g~y~P~~~v~~~~l~~~~~~~~~~i~~--~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~ 81 (460)
T 2wya_A 4 KDVGILALEVYFPAQYVDQTDLEKYNNVEAGKYTV--GLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEV 81 (460)
T ss_dssp SSCEEEEEEEECCSEEEEHHHHHHHTTCCTTCCCC--CCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHhCCCHHHHHH--hhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 368899999999999999999887654 668866 7888887655678999999999999999999999999999999
Q ss_pred EeecCCCCCChHHHHHHHHcCCC--CCCceeeecccCccHHHHHHHHHHHHHcCCCCEEEEEee
Q psy1213 99 GTVIQEVKTSNIGREAALSAGFS--DKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160 (472)
Q Consensus 99 g~~~~~~~~~~~a~~ia~~lGl~--~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~ 160 (472)
++.+++...+..+..++..+|++ .++.+++++.+|+++.+||..|.++|++|..+.++++.+
T Consensus 82 aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~ 145 (460)
T 2wya_A 82 GTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVV 145 (460)
T ss_dssp ECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEE
T ss_pred EeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEE
Confidence 99999888899999999998642 257889999999999999999999999998876655543
No 81
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=87.82 E-value=0.92 Score=44.46 Aligned_cols=88 Identities=20% Similarity=0.150 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCC-------ceee-------ecccCccH-HH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKT-------PAHT-------VTMACISS-NQ 138 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~-------~~~~-------v~~~Casg-~~ 138 (472)
.+.+++.+.|+|+|++++|+|.++.|.... .+..+...+..++|++... ..|+ =.++|+.+ ..
T Consensus 208 aA~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v 285 (347)
T 3lma_A 208 AAADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVV 285 (347)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHH
Confidence 445666899999999999999998753111 1223455677777876211 1111 12345444 33
Q ss_pred HHHHHHHHHHcCCCCEEEEEeeccc
Q psy1213 139 GITTGIGLIAAGAYDVVVAGGVEFM 163 (472)
Q Consensus 139 al~~A~~~I~sG~~d~vLv~G~e~~ 163 (472)
.-.+-...++.|+.+++|++++-.+
T Consensus 286 ~~~~~~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 286 TFAHIFKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHTHHHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHhcCcccEEEEEecccc
Confidence 3355567899999999999998763
No 82
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=85.70 E-value=0.96 Score=46.28 Aligned_cols=61 Identities=11% Similarity=0.066 Sum_probs=39.0
Q ss_pred eecCHHHHHHcCCCCcEEEEEeEEec--c-CCcccccccHHHHHHHHHHHcCCCcCCcCEEEcc
Q psy1213 313 VIMTEAKAKQLGLKPKAYLRDFVYVS--Q-DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVH 373 (472)
Q Consensus 313 vL~s~e~A~~~g~~~~a~I~g~~~~~--~-~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~h 373 (472)
+|.+.+.++..+.++.....|.+... . ++......-...|+++||+++|++++|||++-+-
T Consensus 19 ~v~n~el~~~~g~~~~~~~~Gig~r~~~va~~~E~~~~La~~Aa~~AL~~agi~~~dId~Iiva 82 (460)
T 2v4w_A 19 YVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVG 82 (460)
T ss_dssp EEEHHHHHHHTTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EecHHHHHHHhCCCHHHeeeeeeeEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 56777878777765433334554432 1 1111111123689999999999999999999764
No 83
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=84.87 E-value=3 Score=40.95 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HHHHHHHHhcC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQILANLKAMD 388 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~~~~~~ealg 388 (472)
...|+++||+++|++++|||.+-+-.+.. .......+.||
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lG 114 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcC
Confidence 36889999999999999999887643322 22333445666
No 84
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=84.22 E-value=2.6 Score=41.16 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHH--H
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGL--I 147 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~--I 147 (472)
...++++++|+++|++++|||.++.-. .....-..+...+|++......+ =|+.++|-..+|..+.+. +
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~g~~ 321 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQ-----VSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRL 321 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHcCCC
Confidence 445677899999999999999887632 12334567888999973221122 245556666666665554 4
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+.| |.+|++|+..
T Consensus 322 ~~G--d~vll~~~G~ 334 (345)
T 3s21_A 322 KKG--DRIALLGIGS 334 (345)
T ss_dssp CTT--CEEEEEEEET
T ss_pred CCC--CEEEEEEECh
Confidence 444 7888888754
No 85
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=83.64 E-value=2.7 Score=40.20 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHHc
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~s 149 (472)
-..++++++|+++|++++|||.++.-.. .......+...+|++......+. +..+++...+|..+ ++.
T Consensus 213 ~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~~~ 284 (313)
T 1zow_A 213 IMGDASTRVVEKANLTSDDIDLFIPHQA-----NIRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---LKN 284 (313)
T ss_dssp HHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---HHc
Confidence 4567889999999999999998766321 22334456778888632111111 45556666666554 444
Q ss_pred CC---CCEEEEEeecc
Q psy1213 150 GA---YDVVVAGGVEF 162 (472)
Q Consensus 150 G~---~d~vLv~G~e~ 162 (472)
|+ -|.+|+.++-.
T Consensus 285 ~~~~~g~~vl~~~~G~ 300 (313)
T 1zow_A 285 GKLKDDDTIVLVGFGG 300 (313)
T ss_dssp TCCCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEch
Confidence 43 47888887754
No 86
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=83.35 E-value=3 Score=40.23 Aligned_cols=85 Identities=14% Similarity=0.034 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-ee----cccCccHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-TV----TMACISSNQGITTGIGLI 147 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~Casg~~al~~A~~~I 147 (472)
+...++++++|+++|++++|||.++.-. ........+...+|++...... ++ |+.+++...+|.++.+.-
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H~-----~~~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~~ 306 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTTG 306 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHcC
Confidence 3456788999999999999999887632 1223445677889986431222 11 344455455555443321
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+....|.+|+.++-.
T Consensus 307 ~~~~g~~~l~~~~G~ 321 (335)
T 1u6e_A 307 AAKPGDLALLIGYGA 321 (335)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEeh
Confidence 112347888887743
No 87
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=82.89 E-value=2.7 Score=40.66 Aligned_cols=82 Identities=13% Similarity=0.124 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. .......+...+|++......++ |+.+++...+|..+ ++
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~ 295 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPHQA-----NTRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---LR 295 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCC-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 45567889999999999999998866321 22344567888998632111222 34555555555544 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|+ -|.+|+.++..
T Consensus 296 ~~~~~~G~~vll~~~G~ 312 (331)
T 2x3e_A 296 QGILRDGGNMVLTGFGA 312 (331)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred hCCCCCCCEEEEEEEeH
Confidence 443 37898888764
No 88
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=82.85 E-value=2.3 Score=41.88 Aligned_cols=83 Identities=17% Similarity=0.032 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. ....-..++..+|++...-..+ =|+.++|-..+|..+.+.++
T Consensus 254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq~-----n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~ 328 (359)
T 3h78_A 254 QTLVRIAGEMLAAHELTLDDIDHVICHQP-----NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQ 328 (359)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCC
Confidence 34557889999999999999998865321 2334567888899974222222 24556666777777666654
Q ss_pred cCCCCEEEEEeecc
Q psy1213 149 AGAYDVVVAGGVEF 162 (472)
Q Consensus 149 sG~~d~vLv~G~e~ 162 (472)
.| |.+|++|+-.
T Consensus 329 ~G--d~vll~~fG~ 340 (359)
T 3h78_A 329 PG--QRVLVLTYGS 340 (359)
T ss_dssp TT--CEEEEEEEET
T ss_pred CC--CEEEEEEEch
Confidence 55 7888887644
No 89
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=82.79 E-value=3.9 Score=39.08 Aligned_cols=80 Identities=14% Similarity=0.106 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~~I~ 148 (472)
-..++++++|+++|++++|||.++.-.. .......+...+|++. ..... =+..+++...+|..+ ++
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H~~-----~~~~~d~i~~~lg~~~-~~~~~~~~~~Gn~~~As~~~~L~~~---~~ 289 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPHQA-----NLRIISATAKKLGMSM-DNVVVTLDRHGNTSAASVPCALDEA---VR 289 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEECCS-----CHHHHHHHHHHTTCCG-GGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCCCH-HHhHhhHhhhCcHHHHHHHHHHHHH---HH
Confidence 4567889999999999999998766321 2234456788899863 22222 144556666666554 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|. -|.+|++++..
T Consensus 290 ~~~~~~G~~vll~~~G~ 306 (317)
T 1hnj_A 290 DGRIKPGQLVLLEAFGG 306 (317)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred hCCCCCCCEEEEEEEch
Confidence 443 37888888754
No 90
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=82.60 E-value=3.6 Score=39.71 Aligned_cols=26 Identities=31% Similarity=0.298 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEccC
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVHE 374 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~hd 374 (472)
...|+++||+++|++++|||.+-+-.
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t 81 (321)
T 3il6_A 56 CHQVAKQLLEKSGKQASEIDFILVAT 81 (321)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 36789999999999999999887643
No 91
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=82.19 E-value=4.3 Score=39.34 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. ....-..+...+|++......++ |+.++|-..+|..+ ++
T Consensus 234 ~~~~~~i~~~l~~~gl~~~did~~~~Hq~-----~~~i~~~~~~~lgl~~~~~~~~l~~~GNt~sasi~~~L~~~---~~ 305 (333)
T 4dfe_A 234 NVLEKVAVEALEKANLSAEQIDWLIPHQA-----NIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVA---VR 305 (333)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHhhhhHHhcCchHHHHHHHHHHHH---HH
Confidence 45567889999999999999998865321 23355678889999742222222 33444444455444 44
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|+ -|.+|++|+-.
T Consensus 306 ~g~~~~Gd~vll~~~G~ 322 (333)
T 4dfe_A 306 DGRIKRGQNVLIEGVGG 322 (333)
T ss_dssp TTCSCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEch
Confidence 443 37888887643
No 92
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=81.31 E-value=4.6 Score=38.38 Aligned_cols=81 Identities=11% Similarity=0.102 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee----ecccCccHHHHHHHHHHHHHc
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT----VTMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~----v~~~Casg~~al~~A~~~I~s 149 (472)
...++++++|+++|++++|||.++.-.. .......+...+|++......+ =+..++++...|..+ ++.
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~~~ 282 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPHQA-----NVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---IKE 282 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---HHc
Confidence 4567889999999999999998766321 1223445778899862111111 145566666666655 444
Q ss_pred CC---CCEEEEEeecc
Q psy1213 150 GA---YDVVVAGGVEF 162 (472)
Q Consensus 150 G~---~d~vLv~G~e~ 162 (472)
|+ -|.+|+.++..
T Consensus 283 g~~~~G~~~l~~~~G~ 298 (309)
T 2ebd_A 283 GKVKRGDLILMTAMGG 298 (309)
T ss_dssp TCCCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEch
Confidence 43 37888887643
No 93
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=81.22 E-value=3.7 Score=39.85 Aligned_cols=85 Identities=9% Similarity=-0.058 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-ee----cccCccHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-TV----TMACISSNQGITTGIGLI 147 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~Casg~~al~~A~~~I 147 (472)
+...++++++|+++|++++|||.++.-.. .......+...+|++...... ++ ++.+++...+|..+.+.=
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H~~-----~~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~~~g 305 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPHQA-----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRSG 305 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEECCS-----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHHHcC
Confidence 45567889999999999999998766321 223445678889996330222 11 344555555555443321
Q ss_pred HcCCCCEEEEEeecc
Q psy1213 148 AAGAYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG~~d~vLv~G~e~ 162 (472)
+-..-|.+|+.++..
T Consensus 306 ~~~~G~~vll~~~G~ 320 (339)
T 1mzj_A 306 AVPGGGPALMIGFGA 320 (339)
T ss_dssp SSCTTCEEEEEEEET
T ss_pred CCCCCCEEEEEEEch
Confidence 112347888888754
No 94
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=79.35 E-value=4.5 Score=39.81 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-. ....+-..++..+|++...-..++ |+.++|-..+|.. .++
T Consensus 266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~---~~~ 337 (365)
T 3gwa_A 266 AEVPRAADRLLALAGEPRENIDCFVLHQ-----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALET---MRA 337 (365)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHH---HHH
Confidence 4455778899999999999999887532 123455678889999742222233 3333444444444 344
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|. -|.+|++|+-.
T Consensus 338 ~g~~~~Gd~vll~~fG~ 354 (365)
T 3gwa_A 338 NGTLARGMRLMLLGFGV 354 (365)
T ss_dssp TTCCCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEeh
Confidence 543 37888888743
No 95
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=79.04 E-value=6.6 Score=37.54 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIGLI 147 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~~I 147 (472)
+-..++++++|+++|++++|||.++.-.. .......+...+|++.. .... =+..++++..+|..+ +
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H~~-----~~~~~d~~~~~lg~~~~-~~~~~~~~~Gh~~~As~~~~l~~~---l 290 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPHQA-----NLRIIDAARERLGLPWE-RVAVNVDRYGNTSTASIPLALKEA---V 290 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEECCS-----CHHHHHHHHHTTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCCCHH-HHHHHHHhhCcHHHHHHHHHHHHH---H
Confidence 45567889999999999999998766321 12234457788898631 1111 144556666666554 4
Q ss_pred HcC---CCCEEEEEeecc
Q psy1213 148 AAG---AYDVVVAGGVEF 162 (472)
Q Consensus 148 ~sG---~~d~vLv~G~e~ 162 (472)
+.| ..|.+|+.++-.
T Consensus 291 ~~g~~~~g~~~l~~~~G~ 308 (322)
T 1ub7_A 291 DAGRIREGDHVLLVSFGA 308 (322)
T ss_dssp HHTSSCTTCEEEEEEEET
T ss_pred HhCCCCCCCEEEEEEECh
Confidence 444 247888877643
No 96
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=78.48 E-value=5.5 Score=38.45 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee----cccCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV----TMACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v----~~~Casg~~al~~A~~~I~ 148 (472)
+...++++++|+++|++++|||.++.-.. ....-..++..+|++...-..++ |+.++|-..+|..+ ++
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~-----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~---~~ 295 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPHQA-----NLRIITATAKKLEMDMSQVVVTLDKYANNSAATVPVALDEA---IR 295 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEECCS-----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCC-----CHHHHHHHHHHcCcCHHHhhccHhhcCchHHHHHHHHHHHH---HH
Confidence 34457788999999999999998866321 23355678889999743222233 33444445555544 34
Q ss_pred cCC---CCEEEEEeecc
Q psy1213 149 AGA---YDVVVAGGVEF 162 (472)
Q Consensus 149 sG~---~d~vLv~G~e~ 162 (472)
.|. -|.+|.+|+-.
T Consensus 296 ~g~~~~Gd~vll~~~G~ 312 (323)
T 3il3_A 296 DGRIQRGQLLLLEAFGG 312 (323)
T ss_dssp TTSSCTTCEEEEEEEET
T ss_pred cCCCCCCCEEEEEEEeh
Confidence 443 37888887643
No 97
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=76.27 E-value=3.4 Score=42.48 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=38.6
Q ss_pred eecCHHHHHHcCCCCcEEEEEeEEecc---CCcccccccHHHHHHHHHHHcCCCcCCcCEEEccCc
Q psy1213 313 VIMTEAKAKQLGLKPKAYLRDFVYVSQ---DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEA 375 (472)
Q Consensus 313 vL~s~e~A~~~g~~~~a~I~g~~~~~~---~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~hd~ 375 (472)
+|..++.++..+.++..++.+.|.... .+......-...|+++||+++|++++|||++-+.-+
T Consensus 38 ~v~~~el~~~~g~~~~~~~~~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~ 103 (478)
T 2p8u_A 38 YVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTE 103 (478)
T ss_dssp EEEHHHHHHHHTCCTTCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECS
T ss_pred EecHHHHHHHhCCChhHhecccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc
Confidence 456666666666554323445444221 111111122368999999999999999999987543
No 98
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=74.08 E-value=10 Score=38.08 Aligned_cols=113 Identities=7% Similarity=-0.116 Sum_probs=56.1
Q ss_pred ecCHHHHHHcCC--CCcEEEEEeEEeccCCc---cccccc----HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HH
Q psy1213 314 IMTEAKAKQLGL--KPKAYLRDFVYVSQDPK---DQLLLG----PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQ 379 (472)
Q Consensus 314 L~s~e~A~~~g~--~~~a~I~g~~~~~~~p~---~~~~~~----~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~ 379 (472)
+++.+.++.... ...++|.|++.+..... ...... ...++++||++||++++|||.+-+-..+. ..
T Consensus 15 ~~n~~~~~~~~~~~~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~ 94 (418)
T 2iik_A 15 TENLYFQSMAPQASAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIM 94 (418)
T ss_dssp ------------CCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHH
T ss_pred ccHHHHHHHhhhccCCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccH
Confidence 355555544331 13478998776532110 001111 25788999999999999999765533221 11
Q ss_pred HHHHHHhcCchhhhhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 380 ILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 380 ~~~~~ealg~~~~~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
.......+| +|. .+-.... ....++|+..+..+...|+....+..|+
T Consensus 95 a~~~a~~lG-----------------l~~-----~~p~~~v-~~aCss~~~Al~~A~~~I~~G~~d~vLv 141 (418)
T 2iik_A 95 ARIAQFLSD-----------------IPE-----TVPLSTV-NRQCSSGLQAVASIAGGIRNGSYDIGMA 141 (418)
T ss_dssp HHHHHHHTT-----------------CCT-----TSCEEEE-ECGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHcC-----------------CCC-----CceEEEe-CCCCHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 112223455 220 0111111 2335678888888989998665555554
No 99
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=73.24 E-value=8 Score=43.25 Aligned_cols=84 Identities=14% Similarity=-0.045 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-------ecccCccHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-------VTMACISSNQGITTGIGL 146 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-------v~~~Casg~~al~~A~~~ 146 (472)
...++++++|+++|++++|||.++.-. .....-..+...+|++......+ =|+.++|-..+|..+.+.
T Consensus 865 ~~~~~~~~al~~agl~~~did~~~~Hq-----~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~ 939 (979)
T 3tsy_A 865 NVEKCLTQAFDPLGISDWNSLFWIAHP-----GGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKK 939 (979)
T ss_dssp HHHHHHHHHHGGGTCCCGGGSEEEECC-----SCHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcccceEEECC-----CChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhh
Confidence 356788999999999999999876521 12334567888999974321111 356677778888888888
Q ss_pred HHcCCC-------CEEEEEeecc
Q psy1213 147 IAAGAY-------DVVVAGGVEF 162 (472)
Q Consensus 147 I~sG~~-------d~vLv~G~e~ 162 (472)
++.|+. |.+|.+|+-.
T Consensus 940 ~~~G~~v~~g~~~~~~ll~~~G~ 962 (979)
T 3tsy_A 940 SLKGERATTGEGLDWGVLFGFGP 962 (979)
T ss_dssp HHHTTCSBTTTTCSEEEEEEECG
T ss_pred hcccccccCCCCcceeEEEEeCC
Confidence 887753 5557776643
No 100
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=73.20 E-value=10 Score=36.73 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee-ee----cccCccHHHHHHHHHH--H
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH-TV----TMACISSNQGITTGIG--L 146 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~-~v----~~~Casg~~al~~A~~--~ 146 (472)
...++++++|+++|++++|||.++.-. .....-..+...||+|...... ++ |+.++|-..+|..+.+ .
T Consensus 250 ~~~~~i~~~L~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~g~ 324 (350)
T 4ewp_A 250 SMAKVAREALDAAGVEPEDLAAFIPHQ-----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEENP 324 (350)
T ss_dssp THHHHHHHHHHHHTCCGGGEEEEEECC-----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHHCG
T ss_pred hhhHHHHHHHHhhcCChhHhceEEecC-----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHhCC
Confidence 345778999999999999999886521 1234556788899997432221 22 3344444555655544 2
Q ss_pred HHcCCCCEEEEEeec
Q psy1213 147 IAAGAYDVVVAGGVE 161 (472)
Q Consensus 147 I~sG~~d~vLv~G~e 161 (472)
++.| |.+|.+|+-
T Consensus 325 ~~~G--d~vll~~fG 337 (350)
T 4ewp_A 325 ELSG--GLALQIGFG 337 (350)
T ss_dssp GGTT--SEEEEEEEE
T ss_pred CCCc--CEEEEEEEc
Confidence 4444 788887764
No 101
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=72.20 E-value=7.1 Score=39.73 Aligned_cols=60 Identities=10% Similarity=0.044 Sum_probs=37.7
Q ss_pred eecCHHHHHHcCCCCcEEEE-EeEEe--cc-CCcccccccHHHHHHHHHHHcCCCcCCcCEEEcc
Q psy1213 313 VIMTEAKAKQLGLKPKAYLR-DFVYV--SQ-DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVH 373 (472)
Q Consensus 313 vL~s~e~A~~~g~~~~a~I~-g~~~~--~~-~p~~~~~~~~~~a~~~Al~~Agl~~~dId~~e~h 373 (472)
+|.+.|.++.++..+ .||. +.|.. .. ++......-...|+++||+++|++|+|||++.+-
T Consensus 19 ~v~~~~l~~~~~~~~-~~i~~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~a 82 (460)
T 2wya_A 19 YVDQTDLEKYNNVEA-GKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVG 82 (460)
T ss_dssp EEEHHHHHHHTTCCT-TCCCCCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEcHHHHHHHhCCCH-HHHHHhhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 567778888777654 2432 33321 11 2211111223689999999999999999998863
No 102
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=71.87 E-value=12 Score=37.10 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++-+-.+ ++.......+.||
T Consensus 112 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 154 (402)
T 1ee0_A 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLG 154 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcC
Confidence 67899999999999999998865433 2222334446676
No 103
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=71.36 E-value=11 Score=37.93 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcc----hHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAF----AGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f----~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||.+=+-.+. +.......+.||
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 184 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLP 184 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhC
Confidence 688999999999999999988654332 223344456677
No 104
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=70.33 E-value=9.6 Score=37.76 Aligned_cols=85 Identities=15% Similarity=0.027 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCcee---eecc-cCccHHHHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAH---TVTM-ACISSNQGITTGIGLIA 148 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~---~v~~-~Casg~~al~~A~~~I~ 148 (472)
+-..++++++|+++|++++|||.++.-.. ....-..+...+|++...... .+.. +..++..-+..-..+++
T Consensus 287 ~~~~~~i~~aL~~agl~~~dId~~~~H~~-----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~~ 361 (393)
T 1ted_A 287 SGVAPVVTEMLWDNGLQISDIDLWAIHPG-----GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ 361 (393)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSCEEECCS-----CHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEECCC-----cHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHHh
Confidence 34557789999999999999998876321 223445677889997322110 1211 11222222222234456
Q ss_pred cCCC----CEEEEEeecc
Q psy1213 149 AGAY----DVVVAGGVEF 162 (472)
Q Consensus 149 sG~~----d~vLv~G~e~ 162 (472)
.|.. |.+|+.|+-.
T Consensus 362 ~g~~~~~Gd~vll~~~G~ 379 (393)
T 1ted_A 362 QAESAKAISTGVAFAFGP 379 (393)
T ss_dssp SCSSSSSSEEEEEEEEET
T ss_pred cCccCCCCCeEEEEEecc
Confidence 6643 7888888754
No 105
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=68.46 E-value=13 Score=36.76 Aligned_cols=39 Identities=15% Similarity=0.050 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+ ++.......+.||
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 128 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 128 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 67899999999999999998855432 2223344456677
No 106
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=68.45 E-value=23 Score=35.00 Aligned_cols=98 Identities=11% Similarity=0.084 Sum_probs=57.1
Q ss_pred EEEEEeEEeccCCc--cccccc----HHHHHHHHHHHcCCCcCCcCEEEccCcch-----HHHHHHHHhcCchhhhhhhc
Q psy1213 329 AYLRDFVYVSQDPK--DQLLLG----PAYATPQVLERAGLSLSDIDAWEVHEAFA-----GQILANLKAMDSEWFAKNYM 397 (472)
Q Consensus 329 a~I~g~~~~~~~p~--~~~~~~----~~~a~~~Al~~Agl~~~dId~~e~hd~f~-----~~~~~~~ealg~~~~~~~g~ 397 (472)
++|.|.+.+..... ...... ...+++.||+++|++++|||.+-+-.++. .........||
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lG--------- 79 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAG--------- 79 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTT---------
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcC---------
Confidence 78888887542110 000111 26889999999999999999887643221 11222335566
Q ss_pred CCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 398 GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 398 g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+|.. +-.... +...++|+..+..+...++....++.|+
T Consensus 80 --------l~~~-----~p~~~v-~~aCss~~~al~~A~~~I~~G~~~~vLv 117 (396)
T 4dd5_A 80 --------IPVE-----KPAMTI-NIVCGSGLRSVSMASQLIALGDADIMLV 117 (396)
T ss_dssp --------CCTT-----SCEEEE-CCGGGHHHHHHHHHHHHHHHTSCSEEEE
T ss_pred --------CCCC-----ceEEEe-ccccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 2210 000111 2345678888888888888665666665
No 107
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=67.23 E-value=15 Score=36.39 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcc----hHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAF----AGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f----~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+. +.......+.||
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LG 149 (393)
T 3ov2_A 107 KEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLG 149 (393)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcC
Confidence 678999999999999999988654332 222333446676
No 108
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=66.73 E-value=9.2 Score=37.94 Aligned_cols=76 Identities=17% Similarity=0.043 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec--------ccCccHHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT--------MACISSNQGITTGIGLI 147 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~--------~~Casg~~al~~A~~~I 147 (472)
..+++++|+++|++++|||.+.+. +. .......+...+|++. ..+.++ ...++|+..+..+...+
T Consensus 297 ~~ai~~al~~agl~~~dId~ve~~----d~-fa~~~~~~~~~lg~~~--~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L 369 (395)
T 4e1l_A 297 IPATRKALKKAGLSINDIDLIEAN----EA-FAAQALAVKNELQIDS--SKLNVNGGAIALGHPIGASGARILVTLIYEM 369 (395)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEC----CS-BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEec----Ch-hHHHHHHHHHHhCCCC--CCCCcCCchhhcCCcHHHHHHHHHHHHHHHH
Confidence 477899999999999999998753 11 1122344566788742 112222 23567888888888888
Q ss_pred HcCCCCEEEEE
Q psy1213 148 AAGAYDVVVAG 158 (472)
Q Consensus 148 ~sG~~d~vLv~ 158 (472)
+....++.|+.
T Consensus 370 ~~~~~~~gl~~ 380 (395)
T 4e1l_A 370 QKRKVETGLAT 380 (395)
T ss_dssp HHHTCSEEEEE
T ss_pred HhcCCCEEEEE
Confidence 87666776653
No 109
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=65.50 E-value=8 Score=38.38 Aligned_cols=75 Identities=9% Similarity=-0.046 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec--------ccCccHHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT--------MACISSNQGITTGIGLI 147 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~--------~~Casg~~al~~A~~~I 147 (472)
..+++++|+++|++++|||.+.+... .......+...+|++. ..+.++ ..+++|...+..+...+
T Consensus 295 ~~a~~~al~~agl~~~dId~ve~~d~-----fa~~~~~~~~~lg~~~--~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L 367 (394)
T 3ss6_A 295 APAIRKGLEKVDWSLEDADLLEINEA-----FAAQYLAVEKELDLDR--EKVNVNGSGVGLGHPIGCTGARITVSLIHEL 367 (394)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeCCc-----hHHHHHHHHHHhCCCC--CCCCCCcchHhhCCcHHHHHHHHHHHHHHHH
Confidence 57889999999999999999875311 1123344556778742 122222 22356777788888888
Q ss_pred HcCCCCEEEE
Q psy1213 148 AAGAYDVVVA 157 (472)
Q Consensus 148 ~sG~~d~vLv 157 (472)
+....++.|+
T Consensus 368 ~~~~~~~gl~ 377 (394)
T 3ss6_A 368 KRRGLEKGIA 377 (394)
T ss_dssp HHHTCCEEEE
T ss_pred HhcCCCEEEE
Confidence 7766677665
No 110
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=65.46 E-value=7 Score=38.31 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee-----cccCccHHHHHHHHHHH-
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV-----TMACISSNQGITTGIGL- 146 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v-----~~~Casg~~al~~A~~~- 146 (472)
....++++++|+++|++++|||.+++-...... -..++..+|++......++ |+.++|-..+|..+.+.
T Consensus 238 ~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-----~~~~~~~lgl~~ek~~~~~~~~~GNt~aAsipl~L~~~~~~g 312 (357)
T 3s3l_A 238 DLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-----GHELHDLLGLPDERTSWAYGRTTGHVGAGDQYAGLAHLVENA 312 (357)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-----SCCHHHHHTSCGGGBTHHHHHHHCBCTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-----HHHHHHHcCCCHHHhHHHhccccccchHhHHHHHHHHHHHcC
Confidence 355678899999999999999988753222211 1246777899743222222 22344445566655432
Q ss_pred -HHcCCCCEEEEEeecc
Q psy1213 147 -IAAGAYDVVVAGGVEF 162 (472)
Q Consensus 147 -I~sG~~d~vLv~G~e~ 162 (472)
++.| |.+|++|+-.
T Consensus 313 ~l~~G--d~vll~~fG~ 327 (357)
T 3s3l_A 313 LVQPG--DRVLLFGGGA 327 (357)
T ss_dssp CCCTT--CEEEEECCBT
T ss_pred CCCCC--CEEEEEEEch
Confidence 3333 7899888765
No 111
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=64.80 E-value=9.1 Score=38.08 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHc-CC--CCCCceee----ecccCccHHHHHHHHHH
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSA-GF--SDKTPAHT----VTMACISSNQGITTGIG 145 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~l-Gl--~~~~~~~~----v~~~Casg~~al~~A~~ 145 (472)
....++++++|+++|++++|||.++.-. ....+-..++..+ |+ +....... =|+.++|-..+|..+..
T Consensus 291 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq-----an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~~~ 365 (392)
T 3led_A 291 PLVSEMIIEHAREIGIDPHGLKRMWLHQ-----ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKHQD 365 (392)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEECS-----SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEcC-----CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHHhC
Confidence 3455678899999999999999876521 1123445566664 64 32111111 24445555556665544
Q ss_pred HHHcCCCCEEEEEeecc
Q psy1213 146 LIAAGAYDVVVAGGVEF 162 (472)
Q Consensus 146 ~I~sG~~d~vLv~G~e~ 162 (472)
.++.| |.+|++|+-.
T Consensus 366 ~~~~G--d~vll~gfG~ 380 (392)
T 3led_A 366 DMAQG--DLGLICSFGA 380 (392)
T ss_dssp TCCTT--CEEEEEEEET
T ss_pred CCCCC--CEEEEEEECh
Confidence 44444 7888888754
No 112
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=64.58 E-value=16 Score=37.19 Aligned_cols=39 Identities=15% Similarity=0.050 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+--+ ++.......+.||
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhC
Confidence 57899999999999999999865433 2223344456677
No 113
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=62.43 E-value=14 Score=37.43 Aligned_cols=25 Identities=24% Similarity=0.250 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEcc
Q psy1213 349 PAYATPQVLERAGLSLSDIDAWEVH 373 (472)
Q Consensus 349 ~~~a~~~Al~~Agl~~~dId~~e~h 373 (472)
...|+++||+++|++++|||++-+-
T Consensus 56 a~~Aa~~aL~~agi~~~~Id~li~~ 80 (450)
T 2f82_A 56 SFNAVTSLLEKYKIDPKQIGRLEVG 80 (450)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHcCcCHHHCCEEEEE
Confidence 3688999999999999999999864
No 114
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=61.16 E-value=26 Score=36.24 Aligned_cols=82 Identities=15% Similarity=0.100 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCc-eeeec--------ccCccHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP-AHTVT--------MACISSNQGITTGI 144 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~-~~~v~--------~~Casg~~al~~A~ 144 (472)
-...|++++|+++|++++|||.+-+- + ..+.........||++...+ .+.++ ...++|+..|....
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~----d-AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v 392 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLY----S-CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAV 392 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEEC----C-SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEe----C-CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHH
Confidence 34678999999999999999977552 1 12334445566788742211 12222 34678899999999
Q ss_pred HHHHcCCCCEEEEEee
Q psy1213 145 GLIAAGAYDVVVAGGV 160 (472)
Q Consensus 145 ~~I~sG~~d~vLv~G~ 160 (472)
..++.+..++.|+.+.
T Consensus 393 ~~lr~~~~~~~L~~~~ 408 (520)
T 4egv_A 393 NEMRDKPGQFALVGAN 408 (520)
T ss_dssp HHHHHSTTCEEEEEEE
T ss_pred HHHhcCCCCceEEeCC
Confidence 9999998899998654
No 115
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=60.95 E-value=13 Score=37.01 Aligned_cols=75 Identities=12% Similarity=0.060 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeecc--------cCccHHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM--------ACISSNQGITTGIGLI 147 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~~--------~Casg~~al~~A~~~I 147 (472)
..+++++|+++|++++|||.+-+- +. .........+.+|++. ..+.++. ..++|...+..+...+
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~h----da-f~~~~l~~~~~lg~~~--~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L 380 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELN----EA-FASVVLKFQKDLNIPD--EKLNVNGGAIAMGHPLGATGAMITGTMVDEL 380 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC----CS-BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe----Ch-hHHHHHHHHHHhCCCC--CCCCCCCcHhheeCcHHHHHHHHHHHHHHHH
Confidence 478899999999999999988652 11 1111223445688742 2222222 3467777778888888
Q ss_pred HcCCCCEEEE
Q psy1213 148 AAGAYDVVVA 157 (472)
Q Consensus 148 ~sG~~d~vLv 157 (472)
+....++.|+
T Consensus 381 ~~~~~~~gl~ 390 (407)
T 3svk_A 381 ERRNARRALI 390 (407)
T ss_dssp HHHTCCEEEE
T ss_pred HhcCCCEEEE
Confidence 7655666654
No 116
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=58.42 E-value=7.2 Score=35.77 Aligned_cols=31 Identities=23% Similarity=0.272 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
.-.+....+++++|+++|++++|||.|.++.
T Consensus 33 ~h~~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 33 EHTQRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 3455677899999999999999999999975
No 117
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=57.95 E-value=10 Score=37.59 Aligned_cols=72 Identities=13% Similarity=0.045 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHH--HHcCCCCCCceeeec--------ccCccHHHHHHHHH
Q psy1213 75 ARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAA--LSAGFSDKTPAHTVT--------MACISSNQGITTGI 144 (472)
Q Consensus 75 a~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia--~~lGl~~~~~~~~v~--------~~Casg~~al~~A~ 144 (472)
...++++||+++|++++|||.+-+. + ......+. +.+|+.. ..+.++ ..+++|+..+..+.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~----D---~f~~~~l~~~e~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~ 367 (395)
T 2ib8_A 297 PVYAASMVLKDVGLKKEDIAMWEVN----E---AFSLVVLANIKMLEIDP--QKVNINGGAVSLGHPIGMSGARIVGHLT 367 (395)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEC----C---SBHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----c---ccHHHHHHHHHHcCCCc--cccCCCcchhhcCCChhHHHHHHHHHHH
Confidence 4678999999999999999988742 2 22223333 3378741 122222 23456677777788
Q ss_pred HHHHcCCCCEE
Q psy1213 145 GLIAAGAYDVV 155 (472)
Q Consensus 145 ~~I~sG~~d~v 155 (472)
..++.|++-++
T Consensus 368 ~~L~~~~~gl~ 378 (395)
T 2ib8_A 368 HALKQGEYGLA 378 (395)
T ss_dssp HHSCTTCEEEE
T ss_pred HHHhhCCceEE
Confidence 88877654444
No 118
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=57.53 E-value=8.1 Score=38.15 Aligned_cols=77 Identities=10% Similarity=0.018 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce-----ee-e-cccCccHHHHHHHHHHHHHcC
Q psy1213 78 SLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA-----HT-V-TMACISSNQGITTGIGLIAAG 150 (472)
Q Consensus 78 A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~-----~~-v-~~~Casg~~al~~A~~~I~sG 150 (472)
+++++|+++|++++|||.++.-... ......+...+|++..... +. + |+.+++...+|..+ ++.|
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~-----~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~---~~~g 328 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGG-----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRL---FDEG 328 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSH-----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHH---HHSC
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCC-----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHH---HHhc
Confidence 8899999999999999988763211 2234567888999732211 11 1 33344444444443 4444
Q ss_pred C---CCEEEEEeecc
Q psy1213 151 A---YDVVVAGGVEF 162 (472)
Q Consensus 151 ~---~d~vLv~G~e~ 162 (472)
. -|.+|++|+-.
T Consensus 329 ~~~~Gd~vll~~~G~ 343 (382)
T 1u0m_A 329 GVEEGARGLLAGFGP 343 (382)
T ss_dssp CCCSSCCCEEEEEET
T ss_pred CCCCCCEEEEEEEcc
Confidence 2 36777766643
No 119
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=56.74 E-value=27 Score=34.67 Aligned_cols=83 Identities=17% Similarity=0.084 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHcCCCcCccCE----EEEEeecCCCCCChHHHHHHHHcCCCCCCcee--ee-----cccCccHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDY----IVYGTVIQEVKTSNIGREAALSAGFSDKTPAH--TV-----TMACISSNQGITT 142 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~----vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~--~v-----~~~Casg~~al~~ 142 (472)
...++++++|+++|++++ ||. ++.-. .....-..+...+|++...... ++ |+.++|-..+|..
T Consensus 291 ~~~~~i~~~L~~agl~~~-id~~di~~v~Hq-----~~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L~~ 364 (406)
T 2d3m_A 291 NVEACLIDVFKSVGITPP-EDWNSLFWIPHP-----GGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDE 364 (406)
T ss_dssp HHHHHHHHHHHTTTCCCC-SSGGGSEEEECC-----SCHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCC-CCccceEEEECC-----CCHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHHHH
Confidence 455788899999999988 876 54421 1223445688899997432221 12 5666666777776
Q ss_pred HHHHH-HcC-----C-CCEEEEEeecc
Q psy1213 143 GIGLI-AAG-----A-YDVVVAGGVEF 162 (472)
Q Consensus 143 A~~~I-~sG-----~-~d~vLv~G~e~ 162 (472)
+.+.= +.| . +|.+|++|+..
T Consensus 365 ~~~~g~~~G~~~~g~~~d~vll~~fG~ 391 (406)
T 2d3m_A 365 MRRKSAAKGLETYGEGLEWGVLLGFGP 391 (406)
T ss_dssp HHHHHHHTTCSBTTTTCSEEEEEEEET
T ss_pred HHHhccccCCCccCCCcceEEEEEecc
Confidence 65432 444 1 28888888754
No 120
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=54.73 E-value=13 Score=36.41 Aligned_cols=81 Identities=15% Similarity=0.013 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcC------CCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCce--eee-----cccCccHHHH
Q psy1213 73 ELARHSLIGILQKTG------ISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPA--HTV-----TMACISSNQG 139 (472)
Q Consensus 73 ~La~~A~~~Al~~ag------i~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~--~~v-----~~~Casg~~a 139 (472)
+-..++++++|+++| ++++|||.+ .-. . .......+...+|++..... +++ |+.++|-..+
T Consensus 267 ~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~-~----~~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~ 340 (374)
T 2h84_A 267 SGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHT-G----GKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFV 340 (374)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECC-C----CHHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccccCCChhhcCEe-ECC-C----CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHH
Confidence 345678889999999 999999987 421 1 22345567889999742211 122 3344444444
Q ss_pred HHHHHHHHHcC-CCCEEEEEeecc
Q psy1213 140 ITTGIGLIAAG-AYDVVVAGGVEF 162 (472)
Q Consensus 140 l~~A~~~I~sG-~~d~vLv~G~e~ 162 (472)
|..+ ++.| .-|.+|++|+-.
T Consensus 341 L~~~---~~~~~~Gd~vll~~~G~ 361 (374)
T 2h84_A 341 MDHA---RKSKSLPTYSISLAFGP 361 (374)
T ss_dssp HHHH---HTCSCCCSEEEEEEEET
T ss_pred HHHH---HhhcCCCCeEEEEEecc
Confidence 4443 3444 357888877643
No 121
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=54.58 E-value=7.6 Score=35.22 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC----ChHHHHHHHHcCCCCCCceeeec
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT----SNIGREAALSAGFSDKTPAHTVT 130 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~----~~~a~~ia~~lGl~~~~~~~~v~ 130 (472)
-.+.....++++|+++|+++++||.|.++.--+.+.+ -..+..++..+++ |.+-|+
T Consensus 35 Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~i----Pl~gVs 94 (213)
T 3r6m_A 35 HTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAEL----PMIGVS 94 (213)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTC----CEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCC----CEEEEc
Confidence 4556668999999999999999999998754332211 1234445555554 566554
No 122
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=54.57 E-value=15 Score=36.50 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeee--------cccCccHHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV--------TMACISSNQGITTGIGLI 147 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v--------~~~Casg~~al~~A~~~I 147 (472)
..++++||+++|++++|||.+-+. +. .......+...+|+.. ..+.+ ....++|...+..+...+
T Consensus 298 ~~a~~~al~~Agl~~~dId~ie~~----d~-f~~~~l~~~~~lg~~~--~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L 370 (397)
T 1wl4_A 298 IPAIKQAVTKAGWSLEDVDIFEIN----EA-FAAVSAAIVKELGLNP--EKVNIEGGAIALGHPLGASGCRILVTLLHTL 370 (397)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEC----CS-BHHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEe----cc-cHHHHHHHHHHcCCCC--cCcCCCcCccccCCChhhhHHHHHHHHHHHH
Confidence 578999999999999999988742 21 1111233556678741 11222 233456777888888888
Q ss_pred HcCCCCEEEEE
Q psy1213 148 AAGAYDVVVAG 158 (472)
Q Consensus 148 ~sG~~d~vLv~ 158 (472)
+....++.|+.
T Consensus 371 ~~~~~~~gl~~ 381 (397)
T 1wl4_A 371 ERMGRSRGVAA 381 (397)
T ss_dssp HHHTCCEEEEE
T ss_pred hhcCCCEEEEE
Confidence 87667777764
No 123
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=53.72 E-value=34 Score=33.85 Aligned_cols=76 Identities=13% Similarity=0.001 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHH--HHHcCCCCCCceeee--------cccCccHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREA--ALSAGFSDKTPAHTV--------TMACISSNQGITTGIG 145 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~i--a~~lGl~~~~~~~~v--------~~~Casg~~al~~A~~ 145 (472)
..|+++||+++|++++|||.+-+- + ......+ .+.+|+......+.+ ....++|...+..++.
T Consensus 299 ~~a~~~al~~Agl~~~dId~ie~h----e---afa~~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~ 371 (401)
T 1ulq_A 299 VPATRKALERAGLSFSDLGLIELN----E---AFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVH 371 (401)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEC----C---SBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEe----c---chHHHHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHH
Confidence 578999999999999999987542 1 1122222 234676111111121 1234667888888889
Q ss_pred HHHcCCCCEEEEE
Q psy1213 146 LIAAGAYDVVVAG 158 (472)
Q Consensus 146 ~I~sG~~d~vLv~ 158 (472)
.++.+..++.|+.
T Consensus 372 ~L~~~~~~~gl~~ 384 (401)
T 1ulq_A 372 EMRRRKVQFGLAT 384 (401)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHhhcCCCEEEEE
Confidence 9998888888864
No 124
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=53.57 E-value=21 Score=35.28 Aligned_cols=77 Identities=12% Similarity=0.005 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCC-----CCceeee-cccCccHHHHHHHHHHHHHc
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSD-----KTPAHTV-TMACISSNQGITTGIGLIAA 149 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~-----~~~~~~v-~~~Casg~~al~~A~~~I~s 149 (472)
..++++||+++|++++|||.+-+. +. ....+-.+...+|++. .+....+ ...+++|...+..+...++.
T Consensus 293 ~~a~~~al~~agl~~~dId~ie~~----d~-f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 367 (392)
T 2vu1_A 293 IPASRKALERAGWKIGDLDLVEAN----EA-FAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKR 367 (392)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEC----CS-BHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEec----cc-cHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhc
Confidence 578999999999999999988752 21 1112222456778741 1111112 23456788888888888887
Q ss_pred CCCCEEEE
Q psy1213 150 GAYDVVVA 157 (472)
Q Consensus 150 G~~d~vLv 157 (472)
+..++.|+
T Consensus 368 ~~~~~gl~ 375 (392)
T 2vu1_A 368 RGARKGLA 375 (392)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 66677775
No 125
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=53.42 E-value=20 Score=35.25 Aligned_cols=39 Identities=21% Similarity=0.115 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++-+-.+ ++.......+.||
T Consensus 103 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 103 KEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcC
Confidence 67899999999999999998765332 2222334456677
No 126
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=52.90 E-value=20 Score=35.37 Aligned_cols=39 Identities=18% Similarity=0.083 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcc----hHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAF----AGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f----~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+. +.......+.||
T Consensus 107 ~~Aa~~aL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 149 (389)
T 1i88_A 107 KEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLG 149 (389)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCCCchHHHHHHHHcC
Confidence 678999999999999999988654332 222233445666
No 127
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=52.46 E-value=18 Score=35.94 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+ ++.......+.||
T Consensus 120 ~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (402)
T 3awk_A 120 KEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLG 162 (402)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcC
Confidence 67899999999999999997765332 2222334445666
No 128
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=51.60 E-value=7.1 Score=35.55 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 70 MAHELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 70 ~~~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
.-.+.....+.++|+++|++++|||.|.++.
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~ 74 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGI 74 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 3455667889999999999999999999975
No 129
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=50.98 E-value=21 Score=35.52 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+ ++.......+.||
T Consensus 130 ~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 172 (413)
T 1xes_A 130 KEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLG 172 (413)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcC
Confidence 67899999999999999998764332 2222233445666
No 130
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=50.83 E-value=22 Score=35.40 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCc----chHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEA----FAGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~----f~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+ ++.......+.||
T Consensus 125 ~~Aa~~aL~~agl~~~dId~li~~t~~~~~~p~~a~~v~~~LG 167 (413)
T 2p0u_A 125 KEASMNAIKEWGRPKSEITHIVMATTSGVNMPGAELATAKLLG 167 (413)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEecCCcccCcHHHHHHHHhC
Confidence 67899999999999999998875433 2222334446676
No 131
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=50.78 E-value=25 Score=34.63 Aligned_cols=77 Identities=19% Similarity=0.063 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCC---CC-----CCceeee-cccCccHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGF---SD-----KTPAHTV-TMACISSNQGITTGIGL 146 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl---~~-----~~~~~~v-~~~Casg~~al~~A~~~ 146 (472)
..+++++|+++|++++|||.+-+-... ........+.+|+ +. .+....+ ...+++|...+..+...
T Consensus 285 ~~a~~~al~~agl~~~did~ve~h~~f-----~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 285 VPASKLALKKAGLSASDIDVFEMNEAF-----AAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCSB-----HHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHcCEEEEeCcc-----hHHHHHHHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHH
Confidence 578899999999999999988652111 1122233456776 20 0111111 12345777778888888
Q ss_pred HHcCCCCEEEE
Q psy1213 147 IAAGAYDVVVA 157 (472)
Q Consensus 147 I~sG~~d~vLv 157 (472)
++....++.|+
T Consensus 360 L~~~~~~~gl~ 370 (387)
T 3goa_A 360 MERKDAQFGLA 370 (387)
T ss_dssp HHHTTCSEEEE
T ss_pred HHhcCCCEEEE
Confidence 88665666665
No 132
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=50.69 E-value=14 Score=37.15 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHH--HHHHHHcCCCCCCceeee--------cccCccHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIG--REAALSAGFSDKTPAHTV--------TMACISSNQGITTG 143 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a--~~ia~~lGl~~~~~~~~v--------~~~Casg~~al~~A 143 (472)
-..+++++||+++|++++|||.+..-. .+...+.. ..+...+|.+ ...+.+ ...+++|+..+..+
T Consensus 294 ~~~~ai~~al~~Agl~~~dId~ve~Hg---tgT~~d~~e~~al~~~~g~~--~~~~~v~s~k~~~GH~~gAsG~~~~i~~ 368 (428)
T 3kzu_A 294 GAQRCMVAALKRAGIVPDEIDYINAHG---TSTMADTIELGAVERVVGEA--AAKISMSSTKSSIGHLLGAAGAAEAVFS 368 (428)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCC---CSSTTHHHHHHHHHHHHGGG--GGGCEEECTHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHeeEEEecC---CcchhhHHHHHHHHHHhccC--CCceeeCCchhhhCCCchhhHHHHHHHH
Confidence 446889999999999999999875421 11112222 2233445542 111222 23467888888888
Q ss_pred HHHHHcCC
Q psy1213 144 IGLIAAGA 151 (472)
Q Consensus 144 ~~~I~sG~ 151 (472)
...++.+.
T Consensus 369 ~~~l~~~~ 376 (428)
T 3kzu_A 369 TLAIRDNI 376 (428)
T ss_dssp HHHHHHTE
T ss_pred HHHhccCc
Confidence 88898873
No 133
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=47.48 E-value=27 Score=34.36 Aligned_cols=78 Identities=13% Similarity=0.036 Sum_probs=48.4
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCC--------CCceeee-cccCccHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSD--------KTPAHTV-TMACISSNQGITTGIGL 146 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~--------~~~~~~v-~~~Casg~~al~~A~~~ 146 (472)
..++++||+++|++++|||.+-+- +. .......+.+.+|+.. .+....+ ...+++|...+..+...
T Consensus 288 ~~a~~~al~~Agl~~~dId~ve~~----d~-f~~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~ 362 (390)
T 1wdk_C 288 VPATQKALKRAGLNMADIDFIELN----EA-FAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNV 362 (390)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEC----CS-BHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcEEEec----cC-CHHHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHH
Confidence 578999999999999999988642 11 1112233445677630 1111111 23346677778888888
Q ss_pred HHcCCCCEEEEE
Q psy1213 147 IAAGAYDVVVAG 158 (472)
Q Consensus 147 I~sG~~d~vLv~ 158 (472)
++.+..++.|+.
T Consensus 363 L~~~~~~~gl~~ 374 (390)
T 1wdk_C 363 MKQNGGTFGLST 374 (390)
T ss_dssp HHHTTCSEEEEE
T ss_pred HhhcCCCEEEEE
Confidence 888767776653
No 134
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=47.45 E-value=29 Score=34.98 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=47.1
Q ss_pred HHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceeeec--------ccCccHHHHHHHHHHHH
Q psy1213 76 RHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVT--------MACISSNQGITTGIGLI 147 (472)
Q Consensus 76 ~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~v~--------~~Casg~~al~~A~~~I 147 (472)
..|+++||+++|++++|||.+-+-. .+ ..........+|+.. ..+.++ ..+++|...+..+...+
T Consensus 318 ~~A~~~Al~~AGl~~~DId~iE~h~---af--t~~~l~~~~~lG~~~--~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~L 390 (442)
T 2wu9_A 318 AVAIPAAVKAAGLELDDIDLFEINE---AF--ASQFVYCRNKLGLDP--EKINVNGGAMAIGHPLGATGARCVATLLHEM 390 (442)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEECC---SB--HHHHHHHHHHHTCCG--GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeC---CC--hHHHHHHHHHhCCCC--CCcCCCccHhhcCCchhHHHHHHHHHHHHHH
Confidence 5789999999999999999875421 11 011112224577741 122221 23456777888888888
Q ss_pred HcCC--CCEEEE
Q psy1213 148 AAGA--YDVVVA 157 (472)
Q Consensus 148 ~sG~--~d~vLv 157 (472)
+.+. .++.|+
T Consensus 391 r~~~~~~~~gla 402 (442)
T 2wu9_A 391 KRRGKDCRFGVV 402 (442)
T ss_dssp HHHCTTCCEEEE
T ss_pred hccCCCCCEEEE
Confidence 8766 777774
No 135
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=45.83 E-value=26 Score=34.54 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEccCcc----hHHHHHHHHhcC
Q psy1213 350 AYATPQVLERAGLSLSDIDAWEVHEAF----AGQILANLKAMD 388 (472)
Q Consensus 350 ~~a~~~Al~~Agl~~~dId~~e~hd~f----~~~~~~~~ealg 388 (472)
..|+++||+++|++++|||++=+-.+. +.......+.||
T Consensus 101 ~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 143 (387)
T 3oit_A 101 AEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLG 143 (387)
T ss_dssp HHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhC
Confidence 678999999999999999988654332 222333446677
No 136
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=40.89 E-value=14 Score=37.12 Aligned_cols=77 Identities=14% Similarity=0.056 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEE-eecCCCCCChHHHHHHHHcCCCC-CCcee-----eecccCccHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYG-TVIQEVKTSNIGREAALSAGFSD-KTPAH-----TVTMACISSNQGITTGIGL 146 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g-~~~~~~~~~~~a~~ia~~lGl~~-~~~~~-----~v~~~Casg~~al~~A~~~ 146 (472)
-..+++++||+++|++++|||.+..- +.++.. .+.-...+...+|.+. ..+.. .=...+++|+..+..++..
T Consensus 293 ~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~-d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~ 371 (427)
T 3ho9_A 293 GAALAMANALRDAGIEASQIGYVNAHGTSTPAG-DKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILA 371 (427)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHH-HHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEecCCcCCCc-CHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHH
Confidence 44678999999999999999987652 111110 0111233444555421 11111 1245668899999999999
Q ss_pred HHcCC
Q psy1213 147 IAAGA 151 (472)
Q Consensus 147 I~sG~ 151 (472)
++.+.
T Consensus 372 l~~~~ 376 (427)
T 3ho9_A 372 LRDQA 376 (427)
T ss_dssp HHHTE
T ss_pred HhcCC
Confidence 98874
No 137
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=39.88 E-value=18 Score=35.86 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEE
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYG 99 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g 99 (472)
...++++++|+++|++++|||.++.-
T Consensus 208 ~~~~~~~~~L~~agl~~~did~~~~H 233 (396)
T 1xpm_A 208 SFQQSWNEYAKRQGKSLADFASLCFH 233 (396)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 35678899999999999999988763
No 138
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=36.37 E-value=13 Score=36.95 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCC-h--HHHHHHHHcCCCC-CCcee-----eecccCccHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS-N--IGREAALSAGFSD-KTPAH-----TVTMACISSNQGITTGI 144 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~-~--~a~~ia~~lGl~~-~~~~~-----~v~~~Casg~~al~~A~ 144 (472)
-..+++++||+++|++++|||.+..-. .+... + -...+...+|.+. ..+.. .=+..+++|...+..+.
T Consensus 276 ~~~~ai~~al~~Agl~~~dId~ve~Hg---tgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~ 352 (408)
T 1j3n_A 276 GAALAMARALKDAGIAPEQVGYINAHG---TSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATV 352 (408)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCC---CSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEEeC---CcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHH
Confidence 456789999999999999999875421 11100 1 1222334444321 12211 12455678888999999
Q ss_pred HHHHcC
Q psy1213 145 GLIAAG 150 (472)
Q Consensus 145 ~~I~sG 150 (472)
..++.|
T Consensus 353 l~l~~~ 358 (408)
T 1j3n_A 353 QALYHG 358 (408)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999887
No 139
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=35.79 E-value=84 Score=30.84 Aligned_cols=98 Identities=11% Similarity=0.001 Sum_probs=53.3
Q ss_pred EEEEEeEEeccCCc---cccccc----HHHHHHHHHHHcC----CCcCCcCEEEccCcc---h--HHHHHHHHhcCchhh
Q psy1213 329 AYLRDFVYVSQDPK---DQLLLG----PAYATPQVLERAG----LSLSDIDAWEVHEAF---A--GQILANLKAMDSEWF 392 (472)
Q Consensus 329 a~I~g~~~~~~~p~---~~~~~~----~~~a~~~Al~~Ag----l~~~dId~~e~hd~f---~--~~~~~~~ealg~~~~ 392 (472)
++|.|.+.+..... .+.... ...++++||++|| ++++|||.+-+-... . ...-.....+|
T Consensus 12 v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lG---- 87 (393)
T 1afw_A 12 VVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASG---- 87 (393)
T ss_dssp EEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTT----
T ss_pred EEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcC----
Confidence 68888877542111 000111 2578899999999 999999866543221 1 11112223455
Q ss_pred hhhhcCCCccCCCCCCCCcCCCCCCccccCCCCCcHHHHHHHHHHHHhhccCCcchh
Q psy1213 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449 (472)
Q Consensus 393 ~~~g~g~~~~~G~~p~~~vN~~GG~~a~Ghp~gasG~~~v~e~v~qL~~~~g~~gl~ 449 (472)
+|.. +-.... ....++|+..+..+...++....+..|+
T Consensus 88 -------------l~~~-----~p~~~v-~~aCasg~~Al~~A~~~I~~G~~d~vLv 125 (393)
T 1afw_A 88 -------------IPYS-----TPFVAL-NRQCSSGLTAVNDIANKIKVGQIDIGLA 125 (393)
T ss_dssp -------------CCTT-----SCEEEE-ECGGGHHHHHHHHHHHHHHTTSCSEEEE
T ss_pred -------------CCCC-----ceEEEE-cCcCHHHHHHHHHHHHHHHCCCCCEEEE
Confidence 2210 000111 1234578888889999998654444443
No 140
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=32.88 E-value=1.2e+02 Score=25.81 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHHHHHHcC-CCcCccCEEEE
Q psy1213 68 NMMAHELARHSLIGILQKTG-ISKDLIDYIVY 98 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~ag-i~~~~Id~vi~ 98 (472)
+....+..++.+.+.|++.| +..++|+.+-|
T Consensus 23 n~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~V 54 (156)
T 3nq4_A 23 NQFINDSLLDGAVDALTRIGQVKDDNITVVWV 54 (156)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCCTTSEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcccceEEEEc
Confidence 45567788889999999999 98888885543
No 141
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=32.33 E-value=21 Score=35.51 Aligned_cols=77 Identities=10% Similarity=0.034 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCccCEEEEE-eecCCCCCChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHH
Q psy1213 72 HELARHSLIGILQKTGISKDLIDYIVYG-TVIQEVKTSNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIG 145 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id~vi~g-~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~ 145 (472)
.+-..+++++||+++|++++|||.|..- +.++.. .+.-...+...++- ..+... =....++|...+..+..
T Consensus 278 ~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~-D~~E~~al~~~~~~--~~~v~s~K~~~GH~~gAsG~~~~~~~~~ 354 (412)
T 4ewg_A 278 ASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRG-DVAESQATARTFGE--RMPISSLKSYVGHTLGACGALEAWWTIE 354 (412)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHH-HHHHHHHHHHHHCT--TCEEECTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccc-cHHHHHHHHHHcCC--CCeeeCccccccccHHHHHHHHHHHHHH
Confidence 4456789999999999999999987642 111100 00112223344442 222221 23456788888888888
Q ss_pred HHHcCC
Q psy1213 146 LIAAGA 151 (472)
Q Consensus 146 ~I~sG~ 151 (472)
.++.+.
T Consensus 355 ~l~~~~ 360 (412)
T 4ewg_A 355 MMKRNW 360 (412)
T ss_dssp HHHHTE
T ss_pred HHhcCC
Confidence 998863
No 142
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=30.52 E-value=37 Score=33.68 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC-ChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT-SNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIGLI 147 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~-~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~~I 147 (472)
-..+++++||+++|++++|||.+..-. ++.... +.-..-+...+|-. ..+... =...+++|+..+..+...+
T Consensus 280 ~~~~ai~~al~~Agl~~~dId~ve~Hg-tgt~~~D~~E~~al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l 357 (415)
T 1tqy_B 280 GLERAIRLALNDAGTGPEDVDVVFADG-AGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSL 357 (415)
T ss_dssp SHHHHHHHHHHHHTCCGGGCCEEECCC-CCSHHHHHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEEeC-CCCcCcCHHHHHHHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHH
Confidence 345788999999999999999876521 110000 01112233334431 122111 1335678888888888999
Q ss_pred HcCC
Q psy1213 148 AAGA 151 (472)
Q Consensus 148 ~sG~ 151 (472)
+.+.
T Consensus 358 ~~~~ 361 (415)
T 1tqy_B 358 REGV 361 (415)
T ss_dssp HHTS
T ss_pred hcCC
Confidence 8875
No 143
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=30.51 E-value=20 Score=37.53 Aligned_cols=28 Identities=32% Similarity=0.425 Sum_probs=24.8
Q ss_pred cHHHHHHHHHHHcCCCcCCcCEEEccCc
Q psy1213 348 GPAYATPQVLERAGLSLSDIDAWEVHEA 375 (472)
Q Consensus 348 ~~~~a~~~Al~~Agl~~~dId~~e~hd~ 375 (472)
-|..|++.+|++||++++|||.|=.+..
T Consensus 51 fP~~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 51 APVQAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp CCHHHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred CCHHHHHHHHHHcCCCHHHCcEEEEECC
Confidence 3688999999999999999999987655
No 144
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=30.44 E-value=26 Score=35.37 Aligned_cols=77 Identities=10% Similarity=0.022 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCC-ChHHHHHHHHcCCCCCCcee-----eecccCccHHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT-SNIGREAALSAGFSDKTPAH-----TVTMACISSNQGITTGIGLI 147 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~-~~~a~~ia~~lGl~~~~~~~-----~v~~~Casg~~al~~A~~~I 147 (472)
-..+++++||+++|++++|||.+..-. +..... +.-...+...++-....+.. .=...+++|+..+..+...+
T Consensus 309 ~~~~ai~~al~~Agl~~~dId~ve~Hg-tgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l 387 (451)
T 4ddo_A 309 GAMRAMKLALRMGDVAPEQVDYVNAHA-TSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILAL 387 (451)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCC-CSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEecC-CcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHH
Confidence 446789999999999999999876521 111000 00112233344431112211 12345688888899999999
Q ss_pred HcCC
Q psy1213 148 AAGA 151 (472)
Q Consensus 148 ~sG~ 151 (472)
+.+.
T Consensus 388 ~~~~ 391 (451)
T 4ddo_A 388 RDGV 391 (451)
T ss_dssp HHTE
T ss_pred hcCC
Confidence 8873
No 145
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=29.22 E-value=31 Score=34.33 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCC-CChHHHHHHHHcCCCC-CCceee-----ecccCccHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVK-TSNIGREAALSAGFSD-KTPAHT-----VTMACISSNQGITTGIGL 146 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~-~~~~a~~ia~~lGl~~-~~~~~~-----v~~~Casg~~al~~A~~~ 146 (472)
-..+++++||+++|++++|||.+..-.. .... .+.-...+...++.+. ..+... =...+++|+..+..++..
T Consensus 284 ~~~~ai~~al~~agl~~~dId~ve~Hgt-gt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~ 362 (424)
T 1tqy_A 284 EMAETIRVALDESRTDATDIDYINAHGS-GTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLA 362 (424)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEECCCC-CCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCc-cCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHH
Confidence 4468899999999999999998765211 1100 0001122334444210 122211 234567888899999999
Q ss_pred HHcC
Q psy1213 147 IAAG 150 (472)
Q Consensus 147 I~sG 150 (472)
++.|
T Consensus 363 l~~~ 366 (424)
T 1tqy_A 363 LEHG 366 (424)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 9887
No 146
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=28.52 E-value=89 Score=30.72 Aligned_cols=89 Identities=8% Similarity=-0.076 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHH-------HHHHHHcCCCCCCcee----e-ecccCccHHH
Q psy1213 71 AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIG-------REAALSAGFSDKTPAH----T-VTMACISSNQ 138 (472)
Q Consensus 71 ~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a-------~~ia~~lGl~~~~~~~----~-v~~~Casg~~ 138 (472)
..+...++++++|+++|++++|||.++.-....-....... ..+...++++. .+.+ . =|..++|-..
T Consensus 210 ~~~~~~~~~~~~l~~~g~~~~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~-e~~~~~~~~~GN~~sASi~l 288 (388)
T 3v4n_A 210 YIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILARY-EESIIYSRRVGNLYTGSLYL 288 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHH-HHHTTTGGGTCCCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhCCCH-HHHhhHHHhcCchHHHHHHH
Confidence 34566778899999999999999988763211000000000 22344555431 1111 1 2344555555
Q ss_pred HHHHHHHH---HHcCCCCEEEEEeecc
Q psy1213 139 GITTGIGL---IAAGAYDVVVAGGVEF 162 (472)
Q Consensus 139 al~~A~~~---I~sG~~d~vLv~G~e~ 162 (472)
+|..+.+. ++.| |.+++.++-.
T Consensus 289 ~L~~~l~~~g~~~~G--d~ill~s~Gs 313 (388)
T 3v4n_A 289 GLISLLENATTLTAG--NQIGLFSYGS 313 (388)
T ss_dssp HHHHHHHHCSSCCTT--CEEEEEEEET
T ss_pred HHHHHHHhcCcCCCC--CEEEEEEecC
Confidence 66665544 4444 7888887754
No 147
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=28.49 E-value=35 Score=34.05 Aligned_cols=76 Identities=11% Similarity=0.050 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHHHHHHHHcCCCCCCceee-----ecccCccHHHHHHHHHHHHH
Q psy1213 74 LARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT-----VTMACISSNQGITTGIGLIA 148 (472)
Q Consensus 74 La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a~~ia~~lGl~~~~~~~~-----v~~~Casg~~al~~A~~~I~ 148 (472)
-..+++++||+++|++++|||.+..-........+.-...+...+|- ..+..+ =...+++|+..+..+...++
T Consensus 297 ~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~ 374 (430)
T 1ox0_A 297 GAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMR 374 (430)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHh
Confidence 45678999999999999999987652111000000011223344442 122211 24456788889999999998
Q ss_pred cCC
Q psy1213 149 AGA 151 (472)
Q Consensus 149 sG~ 151 (472)
.+.
T Consensus 375 ~~~ 377 (430)
T 1ox0_A 375 HNF 377 (430)
T ss_dssp HTE
T ss_pred cCc
Confidence 873
No 148
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=26.99 E-value=24 Score=34.16 Aligned_cols=29 Identities=28% Similarity=0.291 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 72 HELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
.+....+++++|+++|++++|||.|.++.
T Consensus 53 ~~~l~~~i~~~L~~ag~~~~did~Iav~~ 81 (334)
T 3eno_A 53 SEVIDTVISRALEKAKISIHDIDLIGFSM 81 (334)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 44667899999999999999999998863
No 149
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=24.36 E-value=93 Score=26.51 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+....+..++.+.+.|++.|++.++|+-+-|
T Consensus 22 n~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~V 52 (157)
T 2obx_A 22 HADIVDQCVSAFEAEMADIGGDRFAVDVFDV 52 (157)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 4556777788889999999988777776544
No 150
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=23.02 E-value=1.4e+02 Score=24.96 Aligned_cols=49 Identities=20% Similarity=0.066 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEEEeecCCCCCChHH-HHHHHHcCCC
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIG-REAALSAGFS 121 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~g~~~~~~~~~~~a-~~ia~~lGl~ 121 (472)
+.+.. ...++++++|+++|+++..|+.+.....-.+ .++ ..++..+|+|
T Consensus 21 g~~~~-~i~~ai~~aL~~~~l~~~~v~~latid~K~d----E~gL~~~A~~lg~p 70 (145)
T 2w6k_A 21 GCSAE-HLRALLERTLGEHGRSLAELDALASIDGKRD----EPGLRQLATLLERP 70 (145)
T ss_dssp TCCHH-HHHHHHHHHHHHTTCCGGGCCEEEEECSSSC----CHHHHHHHHHHTSC
T ss_pred CCCHH-HHHHHHHHHHHHcCCCHHHcceEechHHhCC----CHHHHHHHHHhCCC
Confidence 34444 4568999999999999999998865432221 122 3466777774
No 151
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=22.86 E-value=74 Score=30.43 Aligned_cols=28 Identities=32% Similarity=0.437 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEEEe
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVYGT 100 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~g~ 100 (472)
+....+++++|+++|++++|||.|.++.
T Consensus 49 ~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 49 RLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp HHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 4566799999999999999999998753
No 152
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=22.36 E-value=2e+02 Score=24.33 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+....+..++.+.+.|++.|++.++|+-+-|
T Consensus 23 n~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1rvv_A 23 NDFITSKLLSGAEDALLRHGVDTNDIDVAWV 53 (154)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 4556777788889999999998888876644
No 153
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=21.46 E-value=1.1e+02 Score=33.96 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCccCEEEEE-eecCCCCCChHHHHHHHHcCCCC--CCceee------e-cccCccHHHHHH
Q psy1213 72 HELARHSLIGILQKTGISKDLIDYIVYG-TVIQEVKTSNIGREAALSAGFSD--KTPAHT------V-TMACISSNQGIT 141 (472)
Q Consensus 72 ~~La~~A~~~Al~~agi~~~~Id~vi~g-~~~~~~~~~~~a~~ia~~lGl~~--~~~~~~------v-~~~Casg~~al~ 141 (472)
.+-..+++++||+++|++++|||.+..- +.++-. .+.-...+...+|... ..+... + ....++|+..+.
T Consensus 285 ~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~g-D~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~li 363 (915)
T 2qo3_A 285 GPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALG-DPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLL 363 (915)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTT-HHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccC-CHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHH
Confidence 3455678999999999999999987652 222110 1112234555666421 112211 1 234678899999
Q ss_pred HHHHHHHcCC
Q psy1213 142 TGIGLIAAGA 151 (472)
Q Consensus 142 ~A~~~I~sG~ 151 (472)
.++..++.|.
T Consensus 364 k~~l~L~~~~ 373 (915)
T 2qo3_A 364 KVVLALRNGE 373 (915)
T ss_dssp HHHHHHHHTE
T ss_pred HHHHHHhcCC
Confidence 9999998764
No 154
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=20.99 E-value=1.6e+02 Score=25.11 Aligned_cols=30 Identities=17% Similarity=0.140 Sum_probs=23.6
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCccCEEE
Q psy1213 68 NMMAHELARHSLIGILQK-TGISKDLIDYIV 97 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~-agi~~~~Id~vi 97 (472)
+....+..++.+.+.|++ .|++.++||-+-
T Consensus 28 n~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~ 58 (159)
T 1kz1_A 28 NLQAIEPLVKGAVETMIEKHDVKLENIDIES 58 (159)
T ss_dssp THHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCccceEEEE
Confidence 455677788889999999 899888887553
No 155
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=20.16 E-value=2e+02 Score=24.35 Aligned_cols=31 Identities=13% Similarity=0.088 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 68 NMMAHELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 68 ~~~~~~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+....+..++.+.+.|++.|++.++|+-+-|
T Consensus 23 n~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~V 53 (154)
T 1hqk_A 23 NHALVDRLVEGAIDCIVRHGGREEDITLVRV 53 (154)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 4556777888889999999998888876644
No 156
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=20.03 E-value=58 Score=32.17 Aligned_cols=26 Identities=27% Similarity=0.411 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCCcCccCEEEE
Q psy1213 73 ELARHSLIGILQKTGISKDLIDYIVY 98 (472)
Q Consensus 73 ~La~~A~~~Al~~agi~~~~Id~vi~ 98 (472)
+-..+++++||+++|++++|||.+..
T Consensus 277 ~~~~~a~~~al~~agl~~~dId~ve~ 302 (413)
T 3o04_A 277 EGAARAMKMAIDDAGLTPDKVDYINA 302 (413)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 34568999999999999999998765
Done!