RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy1213
(472 letters)
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 460 bits (1187), Expect = e-161
Identities = 160/422 (37%), Positives = 224/422 (53%), Gaps = 42/422 (9%)
Query: 50 VFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSN 109
V V VRTP G ++ A +L + +L++ G+ + +D ++ G V+Q + N
Sbjct: 1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQN 60
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
R+AAL AG + PA TV C S Q + IAAG DVVVAGGVE MS P
Sbjct: 61 PARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYL 120
Query: 170 HSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAF 229
+ R L N L + D ++ MG +A+ +A +
Sbjct: 121 LPKARRGGRLGLNT----------LDGMLDDGLTDPFTGLS-------MGITAENVAEKY 163
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRV-STPEQM 283
+SR+EQDE+ALRSH A AQE G D I+P++V G + +D G R +T E++
Sbjct: 164 GISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKL 223
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
AKLKPAF K G+VTA N+S + DGA+A ++M+E KAK+LGLKP A + + DP
Sbjct: 224 AKLKPAF-KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-A 281
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GP A P+ L+RAGL+L DID E++EAFA Q LA LK +
Sbjct: 282 IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGL-------------- 327
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D K N GG++++GHP A+G R+ V + L R G++GL C GGQG M+I
Sbjct: 328 ---DPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRRGGRYGLATMCIGGGQGAAMVI 384
Query: 464 ER 465
ER
Sbjct: 385 ER 386
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 435 bits (1120), Expect = e-150
Identities = 185/424 (43%), Positives = 263/424 (62%), Gaps = 4/424 (0%)
Query: 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105
G I V G+RTPF T + + A +L + + +L ++ I +LI+ +V+G V+Q
Sbjct: 4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMP 63
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ NI RE L G + T A++V+ AC +S Q + I AG D+ +AGG + S
Sbjct: 64 EAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSV 123
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+PI S+K+ L+ NKA+T RLKL + +R +P PAVAE+S+G MG +A+++
Sbjct: 124 LPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQM 183
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGVRV-STPE 281
A + +SR+EQD A RSH LA QA +G L D + + + +DN +R ST E
Sbjct: 184 AKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLE 243
Query: 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP 341
AKL+PAF + HG+VTAANS+ LTDGA+A ++M+E++AK LGL P YLR + + + D
Sbjct: 244 DYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV 303
Query: 342 KDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSS 401
+LLGPAYATP LERAGL+L+D+ ++HEAFA Q LANL+ SE FA+ +GRS
Sbjct: 304 WQDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQ 363
Query: 402 KVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGM 461
+G D++KFN GGS++ GHPFAATG R+ + L R G GL ACAAGG G M
Sbjct: 364 AIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGLGLTTACAAGGLGAAM 423
Query: 462 IIER 465
++E
Sbjct: 424 VLEV 427
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 430 bits (1107), Expect = e-149
Identities = 162/420 (38%), Positives = 233/420 (55%), Gaps = 40/420 (9%)
Query: 51 FVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNI 110
V RTP G ++ A +L + +L++ + +LID +++G V+Q + NI
Sbjct: 1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R+AAL AG + PA+TV C S Q + LI AG DVVVAGGVE MS +P
Sbjct: 61 ARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSV 120
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFK 230
R R ++ A+ LK + G +MG +A+ LA +
Sbjct: 121 PRSRRW-GVKPGNAELEDQILKDGLDDPLN--------------GLSMGLTAENLAKKYG 165
Query: 231 VSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRV-STPEQMA 284
+SR+EQDEYALRSH A +A E+G D I+P+ V G +S D G+R +T E++A
Sbjct: 166 ISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVVVSSDEGIRPNTTLEKLA 225
Query: 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ 344
KLKPAF P+G+VTA NSS L DGA+A ++M+E KAK+LGL P A + + DP +
Sbjct: 226 KLKPAF-DPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLARIVSYAVAGVDP-EI 283
Query: 345 LLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVG 404
+ LGP A P+ L++AGLS+SDID +E++EAFA Q+LA +K +
Sbjct: 284 MGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKELGL--------------- 328
Query: 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIE 464
DL K N GG++++GHP A+G R+ + L R G++GL C GGQG+ +I+E
Sbjct: 329 --DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRRGGRYGLATICIGGGQGIAVILE 386
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 349 bits (899), Expect = e-117
Identities = 163/431 (37%), Positives = 239/431 (55%), Gaps = 16/431 (3%)
Query: 44 KTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
T + + + G R PF S YA+ ++ +L G++ + G+ + + +V G V++
Sbjct: 4 PTVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLK 63
Query: 104 EVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ N+ RE L + S TPA+ + AC + + IA G D +AGGV+
Sbjct: 64 HSRDFNLTRECVLGSALSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTT 123
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
SD PI + +R +LL N+AKT DRLK L +RP PE+P E +G +MG A
Sbjct: 124 SDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRNGEPRTGLSMGEHAA 183
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVRV-STPEQ 282
A + +SR+ QDE A SH A ++G+ D++ +G +++DN +R S+ E+
Sbjct: 184 ITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLG---LTRDNNLRPDSSLEK 240
Query: 283 MAKLKPAF-VKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR-------DF 334
+AKLKP F ++TA NS+ LTDGAS ++ +E A + GL AYL DF
Sbjct: 241 LAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDF 300
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
V K+ LL+ PAYA P++L R GL+L D D +E+HEAFA Q+LA LKA + E + +
Sbjct: 301 V----HGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCR 356
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
+G + +G D +K N G SL+ GHPFAATG R+ A L + GLI+ CAA
Sbjct: 357 ERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEKGSGRGLISICAA 416
Query: 455 GGQGVGMIIER 465
GGQGV I+ER
Sbjct: 417 GGQGVTAILER 427
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 342 bits (879), Expect = e-114
Identities = 181/428 (42%), Positives = 263/428 (61%), Gaps = 4/428 (0%)
Query: 41 VKDKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100
VK + G+ I V G+RTPF T + + A +L + + +L ++ I LI+ +V+G
Sbjct: 1 VKTRQGERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQ 60
Query: 101 VIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160
V+Q + NI RE L G + T A++VT AC +S Q I AGA D+ +AGG
Sbjct: 61 VVQMPEAPNIAREIVLGTGMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGA 120
Query: 161 EFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGH 220
+ S +PI S+K+ + L+ NKA+T +LK+ + + +P PAVAE+S+G +MG
Sbjct: 121 DSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAVAEYSTGLSMGQ 180
Query: 221 SADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD---ILPIQVGDKTISKDNGVRV 277
+A+++A + ++R EQD A RSHTLA QA G L + I++DN +R
Sbjct: 181 TAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRH 240
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
ST AKL+PAF + HGSVTAANS+ LTDGA+A ++M E +AK+LG++P Y+R + +
Sbjct: 241 NSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAF 300
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+ D +L+GP+YATP L+RAGL+LSD+ ++HEAFA Q LAN++ S+ FA+
Sbjct: 301 TAIDVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASDKFAQEN 360
Query: 397 MGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGG 456
+GRS +G D++KFN GGS++ GHPFAATG R+ L R G GL ACAAGG
Sbjct: 361 LGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRGGGLGLNTACAAGG 420
Query: 457 QGVGMIIE 464
G MI+E
Sbjct: 421 LGAAMILE 428
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 315 bits (809), Expect = e-103
Identities = 156/430 (36%), Positives = 231/430 (53%), Gaps = 16/430 (3%)
Query: 46 GKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEV 105
+ + VDG RTPFL + A +LA + +L + + D +D ++ G +
Sbjct: 2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSP 61
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+NI R AL G +K PA TV C S Q + + IA G D+V+AGGVE MS
Sbjct: 62 DEANIARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH 121
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL--------PAVAEFSSGET 217
P+ S KM L AK+ +L L +RP + P + P V G
Sbjct: 122 APLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLLRGLTDPVV-----GLN 176
Query: 218 MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTI-SKDNGVR 276
MG +A+ LA F ++R++ D YA RSH AQ +G L +++P+ D D+GVR
Sbjct: 177 MGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVR 236
Query: 277 V-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFV 335
S+ E++AKLKP F +P+G VTA NSS +TDGA ++ +E K+ GL P + D
Sbjct: 237 PDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQ 296
Query: 336 YVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKN 395
+ + DP Q+ LGP +A +L+R GL+L D+D WE++EAFA Q+LA L A E + +
Sbjct: 297 WAALDP-SQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCRE 355
Query: 396 YMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
+G +G D + N GG++++GHP A+G R+ +H + L R + G+ A C G
Sbjct: 356 QLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKRRGTKRGIAAICIGG 415
Query: 456 GQGVGMIIER 465
GQG M++ER
Sbjct: 416 GQGGAMLLER 425
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 302 bits (777), Expect = 3e-99
Identities = 151/431 (35%), Positives = 218/431 (50%), Gaps = 52/431 (12%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K++V V RTP G ++ A EL + L++ G+ + +D ++ G V+Q
Sbjct: 2 KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AAL AG + PA T+ C S + + I AG D+VVAGG E MS
Sbjct: 62 GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQA 121
Query: 167 P--IRHSR---KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHS 221
P + SR KM + L D L D F +G MG +
Sbjct: 122 PHVLPGSRWGQKMGDVELVDTMIH---DGLT-------DAF-----------NGYHMGIT 160
Query: 222 ADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTI-SKDNGV 275
A+ LA + ++R+EQDE+AL S A+ A + G D I+P+ + GD + D
Sbjct: 161 AENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHP 220
Query: 276 RV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334
R +T E +AKL+PAF K G+VTA N+S + DGA+A V+M+EAKAK+LGL P A + +
Sbjct: 221 RPDTTAESLAKLRPAFDK-DGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSY 279
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
DP + +GP A + LE+AG SL+D+D E++EAFA Q LA K +
Sbjct: 280 AVAGVDPA-IMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQALAVEKEL--GL--- 333
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
D K N GG++++GHP A+G R+ V + + R + GL C
Sbjct: 334 ------------DPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRRGAKKGLATLCIG 381
Query: 455 GGQGVGMIIER 465
GGQGV +I+ER
Sbjct: 382 GGQGVALIVER 392
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 262
Score = 276 bits (707), Expect = 1e-90
Identities = 95/278 (34%), Positives = 144/278 (51%), Gaps = 23/278 (8%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
++V V RTP G ++ A +L ++ L++ G+ + +D ++ G V+Q +
Sbjct: 1 DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N R+AAL AG D PA T+ C S + + I AG D+VVAGGVE MS+ P
Sbjct: 61 QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVESMSNAP 120
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+ R AK LK + + + MG +A+ +A
Sbjct: 121 YVLP--ASRVGARMGDAKLVDTMLK--------------DGLTDAFNLIHMGITAENVAK 164
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GD-KTISKDNGVRV-STP 280
+ +SR+EQDE+ALRS A AQ+ G D I+P+ + G + KD G+R +T
Sbjct: 165 KYGISREEQDEFALRSQQKAAAAQKAGKFKDEIVPVTIKGRKGKPLVVDKDEGIRPGTTL 224
Query: 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEA 318
E +AKLKPAF K +G+VTA N+S L DGA+A ++M+E+
Sbjct: 225 ESLAKLKPAFDKENGTVTAGNASGLNDGAAAVLLMSES 262
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 263 bits (674), Expect = 6e-84
Identities = 135/428 (31%), Positives = 195/428 (45%), Gaps = 55/428 (12%)
Query: 52 VDGVRTPFL-LSGTDYANMMAHELARHSLIGILQKT--GISKDLIDYIVYGTVIQE-VKT 107
V RTPF A + A L + L++ + +D ++ G V+Q +
Sbjct: 7 VGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQG 66
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
NI R+AAL+AG PA TV AC S + IA+G DVV+AGGVE MSD P
Sbjct: 67 QNIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAA 227
+ +++L + F L + + G MG +A+R A
Sbjct: 127 ------------------MGREGVRVLDSAVDPMFEDPLG---DATPGYLMGLTAERYAK 165
Query: 228 AFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVGDKTISKDNGVR---VSTPEQMA 284
+ +SR++QDE A++SH A + G+ +I P V + + D R T + A
Sbjct: 166 RYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVADPLRRLDCSPTSDGAA 225
Query: 285 KLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQ 344
L PAF + G+VTA N+S + DGA+A ++M+E+KAK+LGL P A +R + DP
Sbjct: 226 ALVPAFEEVGGTVTAGNASGINDGAAALLLMSESKAKELGLAPLAAIRAYAMAGVDP--S 283
Query: 345 LLLGPAYATPQVLERAGLS-LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
++ GP A L AGL L D+ E EAFA L K +
Sbjct: 284 IMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALGVTKILGDL------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ----FGLIAACAAGG-QG 458
N GG++++GHP ATG R+ V A +L GL C GG QG
Sbjct: 331 ------PVNPSGGAIALGHPIGATGARILVELARQLRGRGQVVAKRRGLATLCIGGGGQG 384
Query: 459 VGMIIERH 466
V ++ER
Sbjct: 385 VAAVLERV 392
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 251 bits (642), Expect = 5e-79
Identities = 150/435 (34%), Positives = 215/435 (49%), Gaps = 50/435 (11%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
++ V + VRTP G + ++ A ELA + ++++TGI ID +++G +
Sbjct: 2 RDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGE 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
IGR AAL AG P + C S Q + T + GA DVV+AGG E MS++
Sbjct: 62 APAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNV 121
Query: 167 P-----IRHSRKMRSLLLRANKAKTPADRL-KLLATIRPDFF-IPELPAVAEFSSGETMG 219
+R + + L DRL + T F +P G M
Sbjct: 122 EFYTTDMRWGVRGGGVQLH--------DRLARGRETAGGRRFPVP---------GG--MI 162
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKT-ISKDN 273
+A+ L + +SR+EQD A+RSH A AQE G D I+P+ V GD T + +D
Sbjct: 163 ETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDE 222
Query: 274 GVRV-STPEQMAKLKP--AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330
R +T E +AKL+P P +VTA N+S D A+AC++ TE KA++LGL+P A
Sbjct: 223 HPRADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLAR 282
Query: 331 LRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390
L + +P ++ +GP AT + L RAGL+L DID E++EAFA Q+LA LK E
Sbjct: 283 LVSWAVAGVEP-SRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQVLAVLK----E 337
Query: 391 WFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450
W G D + N G +S+GHP ATG R+ L R ++GL
Sbjct: 338 W----------GFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRRQARYGLET 387
Query: 451 ACAAGGQGVGMIIER 465
C GGQG+ + ER
Sbjct: 388 MCIGGGQGLAAVFER 402
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 243 bits (622), Expect = 4e-76
Identities = 146/432 (33%), Positives = 215/432 (49%), Gaps = 53/432 (12%)
Query: 47 KNIVFVDGVRTPFLLSG------TDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGT 100
+++ VD RT F + N+ ELA + +++KTGI + ID I+ G
Sbjct: 2 EDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGC 61
Query: 101 VIQEVKT-SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGG 159
+Q + GR A PA V C SS ++ G IA G D+V+AGG
Sbjct: 62 ALQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGG 121
Query: 160 VEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
VE M+ P+ + + KLL P + +L +G MG
Sbjct: 122 VEHMTRTPMGDNPHIEP-------------NPKLLT--DPKYIEYDLT------TGYVMG 160
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNG 274
+A++LA + R+E D ++LRSH LA +A ++GY D ILPI+V K + D
Sbjct: 161 LTAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQS 220
Query: 275 VRVSTP-EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRD 333
VR T E++AKL PAF KP G +TA NSS L GAS ++M++ K+ GLKP A +R
Sbjct: 221 VRPDTSLEKLAKLPPAF-KPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRS 279
Query: 334 FVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFA 393
F + P + GP A+ + LE+AGLS+ DID WE++EAFA +L +K
Sbjct: 280 FGFAGVPP-AIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYAIK-------- 330
Query: 394 KNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACA 453
++G+ D N GG+++IGHP ATG R+ A +L + +G+ C
Sbjct: 331 --------ELGL-DPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKGKDYGVATLCV 381
Query: 454 AGGQGVGMIIER 465
GGQG +++ER
Sbjct: 382 GGGQGGAVVLER 393
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 238 bits (609), Expect = 3e-74
Identities = 151/431 (35%), Positives = 219/431 (50%), Gaps = 58/431 (13%)
Query: 47 KNIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQE 104
+++V VD +RTP S G + N+ A +L+ H + +L + + ID I++G V Q
Sbjct: 2 EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQT 61
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
++ NI R AAL AG PA TV C SS Q + I G DV + GGVE M
Sbjct: 62 LEQGFNIARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHM 121
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
+P+ H D F P L ++G MG +A+
Sbjct: 122 GHVPMNHG----------------VD------------FHPGLSKNVAKAAG-MMGLTAE 152
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD-----KTISKDNGVRV 277
L +SR++QD +A RSH A A ++G + I+P + D K D +R
Sbjct: 153 MLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRP 212
Query: 278 -STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
+T E +A L+PAF +G+VTA SS L+DGASA ++M+E++AK+LGLKP+A +R
Sbjct: 213 ETTVEALAALRPAFDPVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMAV 272
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
DP + GP AT + L+RAGLS+SDID +E++EAFA Q L LK +
Sbjct: 273 AGCDPS-IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQSLPCLKDL--------- 322
Query: 397 MGRSSKVGVPDL--NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
G+ D K N GG++++GHP +G R++ N + R+D QFGL C
Sbjct: 323 -------GLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIG 375
Query: 455 GGQGVGMIIER 465
GQG+ + ER
Sbjct: 376 LGQGIATVFER 386
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 236 bits (605), Expect = 9e-74
Identities = 145/431 (33%), Positives = 208/431 (48%), Gaps = 60/431 (13%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
N V V+ VRTP + + A EL +L + GI ++ ++ G V Q +
Sbjct: 3 NPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQ 62
Query: 108 S-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
S NI R A L AG A T+ C S+ Q GLIAAGA DV +A GVE MS +
Sbjct: 63 SNNITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRV 122
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P L AN RPD + ++P E +A+R+A
Sbjct: 123 P-----------LGANAGPGRG-------LPRPDSWDIDMPNQFE---------AAERIA 155
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYL-TDILPIQV-----------GDKTISKDNG 274
++R++ D + LRS A QA +G +I P+Q + +++D G
Sbjct: 156 KRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQG 215
Query: 275 VRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDF 334
+R +T E +A LKP V G TA SS ++DGA+A + M E +A+ LGL+P+A +
Sbjct: 216 LRDTTMEGLAGLKP--VLEGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQ 273
Query: 335 VYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAK 394
V +P L GP AT +VLE+AG+ + DID E++EAFA +L+ W
Sbjct: 274 ALVGAEPY-YHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASVVLS--------W--- 321
Query: 395 NYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAA 454
++V PD++K N GG++++GHP +TG RL A + L R D LI CA
Sbjct: 322 ------AQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAG 375
Query: 455 GGQGVGMIIER 465
G G IIER
Sbjct: 376 GALSTGTIIER 386
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 231 bits (592), Expect = 1e-71
Identities = 146/428 (34%), Positives = 208/428 (48%), Gaps = 46/428 (10%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ-EV 105
+ +V V GVRT G ++ +L + L + G+ D + ++V+G VI E
Sbjct: 3 REVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEP 62
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ + R AA++AG +TPA V C S Q I + I G DV + GG E MS
Sbjct: 63 RDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSR 122
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL--PAVAEFSSGETMGHSAD 223
P LL A + KL+ D + L P F + MG +A+
Sbjct: 123 AP---------YLLPAARWGARMGDAKLV-----DMMVGALHDP----FGTIH-MGVTAE 163
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVRVS 278
+AA + +SR+ QD AL SH A A GY D I+P+++ G+ D VR
Sbjct: 164 NVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRAD 223
Query: 279 -TPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337
T E +AKLKP F K +G+VTA N+S + DGA+A V+ A+ GLKP A L + +
Sbjct: 224 TTLEDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHA 283
Query: 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM 397
DP + + +GP AT + LERAGL+++D+D E +EAFA Q A + +
Sbjct: 284 GVDP-EYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQACAVTRELGL-------- 334
Query: 398 GRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQ 457
D K N G +S+GHP ATG +TV A L R G++ L+ C GGQ
Sbjct: 335 ---------DPAKVNPNGSGISLGHPVGATGAIITVKALYELQRIGGRYALVTMCIGGGQ 385
Query: 458 GVGMIIER 465
G+ I ER
Sbjct: 386 GIAAIFER 393
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 218 bits (557), Expect = 1e-66
Identities = 135/430 (31%), Positives = 210/430 (48%), Gaps = 42/430 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEV 105
+ D +RTP G +++ A +LA + +L + + ID ++YG Q
Sbjct: 1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60
Query: 106 KTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
+ + N+ R AAL AG P TV C S I I AG D+++AGGVE MS
Sbjct: 61 EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMS 120
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADR-LKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
P KA + R K+ T FI P + ++M +A+
Sbjct: 121 RAP-----------FVMGKADSAFSRSAKIEDTTIGWRFIN--PLMKALYGVDSMPETAE 167
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRV 277
+A F +SR++QD +ALRS AQ G+ + I+P+ + K + +D R
Sbjct: 168 NVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRP 227
Query: 278 STP-EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVY 336
T E +AKLKP +P G+VTA N+S + DGA+A ++ +E ++ GL P+A +
Sbjct: 228 ETTLEGLAKLKPVV-RPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAAT 286
Query: 337 VSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNY 396
+P+ + +GP AT ++L RAGLS+ D E++EAFA Q LA L+ +
Sbjct: 287 AGVEPR-IMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQALAVLREL--------- 336
Query: 397 MGRSSKVGVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
G+ D + + N GG++++GHP A+G RL + A +L R G++ L C
Sbjct: 337 -------GLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGV 389
Query: 456 GQGVGMIIER 465
GQG+ + IER
Sbjct: 390 GQGIALAIER 399
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 214 bits (548), Expect = 3e-65
Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 55/435 (12%)
Query: 47 KNIVFVDGVRTP---FLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ 103
+++ V RTP FL S +++ A EL ++ L++ G+ L+ + +G V+
Sbjct: 1 RDVCIVGVARTPIGGFLGS---LSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVL- 56
Query: 104 EVKTSNIG----REAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGG 159
++N+G R+AAL AG T TV C S + + I G DVVVAGG
Sbjct: 57 ---SANLGQAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGG 113
Query: 160 VEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
+E MS+ P L A K T+ L V + MG
Sbjct: 114 MESMSNAP--------KYLPEARKGSRLGH-----DTVVDGMLKDGLWDV---YNDFGMG 157
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKT------ISKD 272
A+ A + +SR+EQD YA++S+ A AQE G I+P++V + KD
Sbjct: 158 VCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKD 217
Query: 273 NGVRVSTPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332
G+ P ++ KL+P+F + GSVTA N+S ++DGA+A V+++ KA +LGL+ A +R
Sbjct: 218 EGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIR 277
Query: 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392
+ +Q P + PA A P+ L+ AGL S +D +E++EAF+ LAN K +
Sbjct: 278 GYADAAQAP-ELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVVALANQKLL----- 331
Query: 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAAC 452
G+ K N GG++S+GHP +G R+ V L ++G++G+ C
Sbjct: 332 -----------GLDP-EKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSKNGKYGVAGIC 379
Query: 453 AAGGQGVGMIIERHP 467
GG +++E
Sbjct: 380 NGGGGASAIVVELMQ 394
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 213 bits (544), Expect = 9e-65
Identities = 144/430 (33%), Positives = 210/430 (48%), Gaps = 58/430 (13%)
Query: 48 NIVFVDGVRTPFLLS-GTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEV 105
++V VD RTP S G + N A +L+ H + +L + + ++ I +G V Q +
Sbjct: 1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60
Query: 106 KTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
+ NI R AAL A + A TV C SS Q + I G DV + GGVE M
Sbjct: 61 EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMG 120
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADR 224
+P+ H F P + ++G MG +A+
Sbjct: 121 HVPMMHGVD----------------------------FHPGMSLHVAKAAG-MMGLTAEM 151
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQA-QEKGYLTDILPIQVGD-----KTISKDNGVRV- 277
L +SR++QD +A RSH A A QE + +I+P Q D K D +R
Sbjct: 152 LGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPE 211
Query: 278 STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYV 337
+T E +A L+PAF +G+VTA SS L+DGASA ++M+E +A +LGLKP+A +R
Sbjct: 212 TTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVA 271
Query: 338 SQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYM 397
DP + GP AT + L+RAGLS+SDID +E++EAFA Q L LK +
Sbjct: 272 GCDPS-IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQALPCLKDL---------- 320
Query: 398 GRSSKVGVPDL--NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
G+ D K N GG++++GHP +G R++ N + ++D FGL C
Sbjct: 321 ------GLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQKDATFGLATMCIGL 374
Query: 456 GQGVGMIIER 465
GQG+ + ER
Sbjct: 375 GQGIATVFER 384
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 211 bits (538), Expect = 6e-64
Identities = 138/417 (33%), Positives = 201/417 (48%), Gaps = 45/417 (10%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQ-EVKTSNI 110
VD VRTP A + +L H L G++ +TGI +D +++G V + NI
Sbjct: 7 VDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNI 66
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R + L+AG ++ P TV C SS Q I + +G D+VVAGGV+ MS IPI
Sbjct: 67 ARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPI-- 124
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGE-TMGHSADRLAAAF 229
+ A T ++L F + + E + A+ +A +
Sbjct: 125 -----------SSAMTAGEQLGF-----TSPFAESKGWLHRYGDQEVSQFRGAELIAEKW 168
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVSTPEQMAKLKP 288
+SR+E + +AL SH A A G + I+P VG T+ D G R ++ E+MA LKP
Sbjct: 169 GISREEMERFALESHRRAFAAIRAGRFDNEIVP--VGGVTV--DEGPRETSLEKMAGLKP 224
Query: 289 AFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLG 348
+ G +TAA +S ++DGASA ++ +E K+ GL P+A + DP +L
Sbjct: 225 --LVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPV-FMLTA 281
Query: 349 PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDL 408
P AT LE+ GLS+ DID E++EAFA +LA LK + D
Sbjct: 282 PIPATRYALEKTGLSIDDIDVVEINEAFAPVVLAWLKETGA-----------------DP 324
Query: 409 NKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMIIER 465
K N GG++++GHP ATG +L + L R G++GL C GG IIER
Sbjct: 325 AKVNPNGGAIALGHPLGATGAKLMTTLLHELERTGGRYGLQTMCEGGGTANVTIIER 381
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 211 bits (538), Expect = 8e-64
Identities = 137/434 (31%), Positives = 213/434 (49%), Gaps = 62/434 (14%)
Query: 50 VFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSN 109
V V RTPF G ++ A EL ++ L++ +S + ++ ++ GTV+Q +
Sbjct: 5 VIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQI 64
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP-- 167
R+AA +AG + TV C S + +T +I AG V+VAGG+E MS+ P
Sbjct: 65 PSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYI 124
Query: 168 IRHSR--------KMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMG 219
+ +R ++ L++ AD L FS G MG
Sbjct: 125 LPGARWGYRMGDNEVIDLMV--------ADGL-----------------TCAFS-GVHMG 158
Query: 220 HSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDN 273
+A +SR+ QDE+A RSH A A E+G + I+P+ + + ++KD
Sbjct: 159 VYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDE 218
Query: 274 GVRVST-PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLR 332
R T E++AKLKP F G++TA N+ + DGA+A V+M+E +AKQ G KP A +
Sbjct: 219 APRKDTTIEKLAKLKPVF-DKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATIL 277
Query: 333 DFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWF 392
++ + KD P YA +LE+ G ++ DID +E++EAFA LA
Sbjct: 278 AHTAIAVEAKD-FPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVALA---------- 326
Query: 393 AKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAAC 452
S+++ D K N GG++++GHP A+G R+ V + L R G G+ A C
Sbjct: 327 -------STEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAIC 379
Query: 453 AAGGQGVGMIIERH 466
+ GGQG ++IE H
Sbjct: 380 SGGGQGDAVLIEVH 393
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 208 bits (532), Expect = 6e-63
Identities = 138/438 (31%), Positives = 211/438 (48%), Gaps = 66/438 (15%)
Query: 47 KNIVFVDGVRTPF--LLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE 104
+ V V G RTP G+ + +L + L++ G + ID ++ G + E
Sbjct: 2 REAVIVAGARTPVGKAKKGS-LKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPE 60
Query: 105 VKTS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
+ N+ R AG PA T+ C S Q I G I G + V+AGG E M
Sbjct: 61 AEQGLNMARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESM 120
Query: 164 SDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSAD 223
S +P M ++R N L P++++ MGH+A+
Sbjct: 121 SLVP------MMGHVVRPNPR---------LVEAAPEYYM-------------GMGHTAE 152
Query: 224 RLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV-----GD--------KTI 269
++A + +SR++QD +A+RSH A +A +G D I+P+ V G+ T
Sbjct: 153 QVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITF 212
Query: 270 SKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
S+D GVR +T E + KL+PAF GSVTA NSS ++DGA+A ++M KA+ GLKP
Sbjct: 213 SQDEGVRADTTLEILGKLRPAF-NVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPL 271
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388
A R F V+ P + + +GP A P+ L+ AGL LSDI +E++EAFA Q + ++ +
Sbjct: 272 AKFRSFA-VAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELG 330
Query: 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGL 448
D K N GG++++GHP TG +LT+ + + R + QFG+
Sbjct: 331 L-----------------DEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGI 373
Query: 449 IAACAAGGQGVGMIIERH 466
+ C GG G + E
Sbjct: 374 VTMCIGGGMGAAGVFELL 391
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 209 bits (533), Expect = 7e-63
Identities = 130/377 (34%), Positives = 194/377 (51%), Gaps = 57/377 (15%)
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N+ R A+ G+ D P TV C SS Q I AG DV ++ GVE +S
Sbjct: 66 FNMARVVAVLLGY-DFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFA 124
Query: 168 IRHSRKM---RSLLLRANKAKT-------------PADRLKLLATIRPDFFIPELPAVAE 211
+S + ++ L +A+T P + L PD +I
Sbjct: 125 KGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLL-----PDVYI-------- 171
Query: 212 FSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYL-TDILPIQVGDKT-I 269
MG +A+ +A +SR+EQDE+ +RS A++A G+ +I P+ + D T +
Sbjct: 172 -----AMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVV 226
Query: 270 SKDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPK 328
S D+G R +T E++++LKP F +P G+VTA N+ L DGA+A VIM++ KA++LGL P
Sbjct: 227 STDDGPRAGTTYEKVSQLKPVF-RPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPL 285
Query: 329 AYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMD 388
A + VS + + LGP A+ Q L RAG+S+ DID E++EAFA Q+L + + +
Sbjct: 286 ARIVS-TGVSGLSPEIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQVLPSAREL- 343
Query: 389 SEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGL 448
G+ D +K N GG++++GHPF TG R+T N L D FGL
Sbjct: 344 ---------------GI-DEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTHDKTFGL 387
Query: 449 IAACAAGGQGVGMIIER 465
C GGQG+ M++ER
Sbjct: 388 ETMCVGGGQGMAMVLER 404
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 204 bits (522), Expect = 3e-61
Identities = 132/425 (31%), Positives = 214/425 (50%), Gaps = 42/425 (9%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKT-GISKDLIDYIVYGTVIQEVKTS-N 109
D +RTP G +++ A +L L ++ + G+ + +D ++YG Q + + N
Sbjct: 7 CDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRN 66
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ R +AL AG P T+ C S + T I AG ++++AGGVE MS P
Sbjct: 67 VARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAP-- 124
Query: 170 HSRKMRSLLLRANKAKTPADR-LKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAA 228
KA + R ++ T F+ P + ++M +A+ +A
Sbjct: 125 ---------FVMGKADSAFSRQAEIFDTTIGWRFVN--PLMKAQYGVDSMPETAENVAED 173
Query: 229 FKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDK-----TISKDNGVRVST-PE 281
+ +SR +QD +ALRS A AQ G+L + I+P+ + K + +D R T E
Sbjct: 174 YNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLE 233
Query: 282 QMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDP 341
+AKLKP F +P G+VTA N+S + DGA+A ++ +EA AK+ GL P+A + +P
Sbjct: 234 ALAKLKPVF-RPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP 292
Query: 342 KDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSS 401
+ + +GPA AT ++L R GL++ D E++EAFA Q LA L+ +
Sbjct: 293 R-IMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQGLAVLRQL-------------- 337
Query: 402 KVGVPDLNKF-NNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVG 460
G+ D + N GG++++GHP +G RL + A ++L R G++ L C GQG+
Sbjct: 338 --GLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERTGGRYALCTMCIGVGQGIA 395
Query: 461 MIIER 465
+ IER
Sbjct: 396 LAIER 400
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 201 bits (512), Expect = 5e-60
Identities = 136/434 (31%), Positives = 206/434 (47%), Gaps = 67/434 (15%)
Query: 50 VFVDGVRTPFLLSGTDYANMM-AHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT- 107
V V RTP S NM L H + +++ + ++ ++ G E T
Sbjct: 5 VIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATG 64
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
+NI R+ AL AG P TV C S Q I + AG DV VAGGVE +S +
Sbjct: 65 ANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQ 124
Query: 168 IRHSRKM-RSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
+R M R L +K P+ + M +A+ +A
Sbjct: 125 NEMNRHMLREGWLVEHK---------------PEIYWS-------------MLQTAENVA 156
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQ----VGDK----------TISK 271
+ +S++ QDEY ++S A AQ G D I+PI V DK T+S
Sbjct: 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSA 216
Query: 272 DNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAY 330
D G+R +T E ++K++ A P G +TA N+S +DGASACV+M A++ GL+P
Sbjct: 217 DEGIRPDTTLEGVSKIRSAL--PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGI 274
Query: 331 LRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSE 390
R F +P D++ +GP +A P++L++AGL + DID WE++EAFA Q+L
Sbjct: 275 FRGFAVAGCEP-DEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQVL--------- 324
Query: 391 WFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIA 450
Y +G+P ++ N GG++++GHP+ +G RLT HA R ++ ++
Sbjct: 325 -----YC--RDTLGIPM-DRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGAKYVVVT 376
Query: 451 ACAAGGQGVGMIIE 464
C GGQG + E
Sbjct: 377 MCIGGGQGAAGLFE 390
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 200 bits (510), Expect = 1e-59
Identities = 134/423 (31%), Positives = 211/423 (49%), Gaps = 39/423 (9%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQK-TGISKDLIDYIVYGTVIQEVKTS-N 109
D +RTP G +++ A +L L ++++ + ID ++YG Q + + N
Sbjct: 7 CDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRN 66
Query: 110 IGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ R + L AG P T+ C S + I +G +++AGGVE MS P
Sbjct: 67 VARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFV 126
Query: 170 HSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAF 229
+ + +A T TI F P + + S M +A+ +A +
Sbjct: 127 MGKAESAFSRQAEIFDT---------TIGWRFVNPLMKQLYGVDS---MPETAENVATDY 174
Query: 230 KVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPIQV----GD-KTISKDNGVRVSTPEQM 283
VSR +QD +ALRS A +AQ G L +I+P+ + GD +S+D R +T E +
Sbjct: 175 NVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEAL 234
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
AKLK V+P G+VTA N+S + DGA A ++ +EA A++ GLKP+A + +P+
Sbjct: 235 AKLKGV-VRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVEPR- 292
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GPA AT ++L R G++L D E++EAFA Q LA L+ +
Sbjct: 293 VMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLREL---------------- 336
Query: 404 GVPDLN-KFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462
G+ D + + N GG++++GHP A+G RL A +L R G+F L C GQG+ +
Sbjct: 337 GLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLERTGGRFALCTMCIGVGQGIAIA 396
Query: 463 IER 465
IER
Sbjct: 397 IER 399
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 197 bits (502), Expect = 7e-58
Identities = 142/459 (30%), Positives = 209/459 (45%), Gaps = 72/459 (15%)
Query: 27 SICTSHNVYSPRKSVKDKTGKNIVFVDGVRTPFLLSGT-DYANMMAHELARHSLIGILQK 85
S C + + S G ++V V RTP + + + +L L +++K
Sbjct: 28 SACAAGD--SAAYHRTTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEK 85
Query: 86 TGISKDLIDYIVYGTVIQE-VKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGI 144
TG++ + IV GTV+ + +N R AA AGF + P TV C S Q +
Sbjct: 86 TGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVA 145
Query: 145 GLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIP 204
I AG YD+ + GVE M+ P+ +
Sbjct: 146 AAIKAGFYDIGIGAGVESMTTNPMAWEGGVN----------------------------- 176
Query: 205 ELPAVAEFSSGET----MGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-I 259
P V FS + MG +++ +A F V+R+EQD+ A+ SH A A G D I
Sbjct: 177 --PRVESFSQAQDCLLPMGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEI 234
Query: 260 LPIQ---VGDKT-------ISKDNGVRVSTP-EQMAKLKPAFVKPHGSVTAANSSFLTDG 308
+P+ V KT IS D+G+R +T +AKLKP F K +G+ TA NSS ++DG
Sbjct: 235 VPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVF-KKNGTTTAGNSSQVSDG 293
Query: 309 ASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDID 368
A A ++M + A Q GL R F V DP + +GPA A P ++ AGL L DID
Sbjct: 294 AGAVLLMKRSVAMQKGLPILGVFRSFAAVGVDPA-VMGIGPAVAIPAAVKAAGLELDDID 352
Query: 369 AWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATG 428
+E++EAFA Q + K K+G+ D K N GG++++GHP ATG
Sbjct: 353 LFEINEAFASQFVYCCK----------------KLGL-DPEKVNVNGGAIALGHPLGATG 395
Query: 429 VRLTVHAANRLVRE--DGQFGLIAACAAGGQGVGMIIER 465
R + + R D +FG+++ C G G + ER
Sbjct: 396 ARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFER 434
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 193 bits (492), Expect = 7e-57
Identities = 133/444 (29%), Positives = 203/444 (45%), Gaps = 81/444 (18%)
Query: 53 DGVRTPFLLSGTDYANMMAHE-----LARHSLIGILQKTGISKDLIDYIVYGTVIQEV-- 105
D VRTP G + HE LA L + + G+ +D +V G V V
Sbjct: 8 DAVRTP---RGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTP-VGD 63
Query: 106 KTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
+ ++I R A L+AG + P + C S + + + +G D+V+AGGVE MS
Sbjct: 64 QGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSR 123
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+P+ ++ D +T P +F+P+ G SAD +
Sbjct: 124 VPMG-----------SDGGAWAMDP----STNFPTYFVPQ-------------GISADLI 155
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLT-DILPI--QVGDKTISKDNGVRV-STPE 281
A + SR++ D YA+ S A A +GY ++P+ Q G + D +R +T E
Sbjct: 156 ATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTME 215
Query: 282 QMAKLKPAFVKP-------------HGSV-------TAANSSFLTDGASACVIMTEAKAK 321
+AKLKP+F + V A NSS + DGA+A +I +E K
Sbjct: 216 SLAKLKPSFAMMGEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGK 275
Query: 322 QLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQIL 381
LGLKP+A + + DP +L GP AT + L +AGL++ DID +E++EAFA +L
Sbjct: 276 ALGLKPRARIVATATIGSDPT-IMLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVVL 334
Query: 382 ANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVR 441
++A+D +P +K N GG++++GHP ATG + + L R
Sbjct: 335 RFMQALD----------------IPH-DKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377
Query: 442 EDGQFGLIAACAAGGQGVGMIIER 465
+ LI C GG G+ IIER
Sbjct: 378 RGKRTALITLCVGGGMGIATIIER 401
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 191 bits (486), Expect = 5e-56
Identities = 137/422 (32%), Positives = 216/422 (51%), Gaps = 39/422 (9%)
Query: 53 DGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS-NIG 111
DG+R+PF A++ +LA + +L+K+G D I+ ++ G Q + S N+
Sbjct: 8 DGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVA 67
Query: 112 REAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHS 171
R A L AG P TV C S + I G D+ +AGGVE MS P
Sbjct: 68 RNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPF--- 124
Query: 172 RKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKV 231
++ +A A + ++ TI F P++ VA++ ++M + D +AA F +
Sbjct: 125 -----VMGKAESAFSRDAKV-FDTTIGARFPNPKI--VAQYG-NDSMPETGDNVAAEFGI 175
Query: 232 SRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV------GDKTISKDNGVRV-STPEQM 283
SR++ D +A +S Q A+E+G+ D I PI+V K +++D R ST E +
Sbjct: 176 SREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEAL 235
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
KLKP F G VTA N+S + DGA+A +I + A ++ GLKP A + +P+
Sbjct: 236 TKLKPLFEG--GVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR- 292
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ +GP A + L RAGL+L D+D E++EAFA Q+L LK + ++
Sbjct: 293 IMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQVLGCLKGLGVDF------------ 340
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D + N GG++++GHP A+G RL + AA L R ++ +++ C GQG+ M+I
Sbjct: 341 ---DDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRGKRYAVVSLCIGVGQGLAMVI 397
Query: 464 ER 465
ER
Sbjct: 398 ER 399
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 189 bits (482), Expect = 2e-55
Identities = 133/436 (30%), Positives = 196/436 (44%), Gaps = 70/436 (16%)
Query: 52 VDGVRTPFLLSGTDYANMMAH----ELARHSLIGIL-QKTGISKDLIDYIVYGTVIQEVK 106
V RTP G M + +L H L + Q G+ LI+ + G + E +
Sbjct: 11 VAATRTPV---GKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAE 67
Query: 107 TS-NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD 165
N+ R AL AG + TV C S Q + I G DV++A GVE MS
Sbjct: 68 QGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSM 127
Query: 166 IPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRL 225
+P+ NK ++ P F + MG +A+++
Sbjct: 128 VPMM-----------GNKP-----------SMSPAIFARD----ENVGIAYGMGLTAEKV 161
Query: 226 AAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGD--------------KTIS 270
A +KVSR++QD +AL SH A AQ+ G D I P ++ + +T+
Sbjct: 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVD 221
Query: 271 KDNGVRV-STPEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKA 329
D G R ++ E +AKLKP F GSVTA NSS +DGA A ++++E KQ L P A
Sbjct: 222 LDEGPRADTSLEGLAKLKPVF-ANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLA 280
Query: 330 YLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDS 389
F V+ P + + +GP A P L++AGL D+D E++EAFA Q LA ++ +
Sbjct: 281 RFVSFA-VAGVPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGL 339
Query: 390 EWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLI 449
D +K N GG++++GHP ATG T + L R + ++G++
Sbjct: 340 -----------------DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRTNLKYGMV 382
Query: 450 AACAAGGQGVGMIIER 465
C G G I ER
Sbjct: 383 TMCVGTGMGAAGIFER 398
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 168 bits (429), Expect = 4e-51
Identities = 58/141 (41%), Positives = 81/141 (57%), Gaps = 18/141 (12%)
Query: 325 LKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANL 384
LKP A +R + V DP + +GPAYA P+ L++AGL+++DID +E++EAFA Q LA
Sbjct: 1 LKPLARIRSYATVGVDP-AIMGIGPAYAIPKALKKAGLTVNDIDLFEINEAFAAQALAVA 59
Query: 385 KAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDG 444
K + D K N GG++++GHP A+G R+ V + L R G
Sbjct: 60 KDLGI-----------------DPEKVNVNGGAIALGHPLGASGARILVTLLHELKRRGG 102
Query: 445 QFGLIAACAAGGQGVGMIIER 465
++GL C GGQGV MIIER
Sbjct: 103 KYGLATLCIGGGQGVAMIIER 123
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 176 bits (448), Expect = 1e-50
Identities = 138/426 (32%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
+++V V RT AN+ A EL + +L++TG+ +D ++ G V+
Sbjct: 2 QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+AA+ AG PA T+ C S + + I G +V++AGG E MS
Sbjct: 62 GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA 121
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P +L + +L+ ++ D + + + MG +A+ L
Sbjct: 122 P---------YVLPGARTGLRMGHAQLVDSMITD-------GLWDAFNDYHMGITAENLV 165
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GD-KTISKDNGVRV-ST 279
+ +SR+ QD +A S A A E G D I PI + G+ + D R +T
Sbjct: 166 EKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTT 225
Query: 280 PEQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ 339
E +AKLKPAF K GSVTA N+S L DGA+A ++M+ AKAK LGL A + +
Sbjct: 226 AESLAKLKPAF-KKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV 284
Query: 340 DPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGR 399
DP + +GP AT + L++AG SL+++D E +EAFA Q LA K + W
Sbjct: 285 DPA-IMGIGPVSATRRCLDKAGWSLAELDLIEANEAFAAQSLAVGKEL--GW-------- 333
Query: 400 SSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGV 459
D K N GG++++GHP A+G R+ V + ++R D + GL C GGQGV
Sbjct: 334 -------DAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRRDAKKGLATLCIGGGQGV 386
Query: 460 GMIIER 465
+ IER
Sbjct: 387 ALAIER 392
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 175 bits (445), Expect = 3e-50
Identities = 117/422 (27%), Positives = 198/422 (46%), Gaps = 47/422 (11%)
Query: 52 VDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQE-VKTSNI 110
V RT G A +LA L ++ ++G LI+ ++ G V Q + +N+
Sbjct: 7 VAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNV 66
Query: 111 GREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRH 170
R A L++ + P ++ C SS Q + + +G D+V+A GVE M+ +P+
Sbjct: 67 ARNAVLASKLPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGS 126
Query: 171 SRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFK 230
+L + + ++ P + +FS + G A+ +A +
Sbjct: 127 PS---TLPAKNGLGHYKSPGME-----------ERYPGI-QFS--QFTG--AEMMAKKYG 167
Query: 231 VSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQV----GDKTISK-DNGVRV-STPEQM 283
+S+ + DE+AL+SH A A + G I+P+++ G + D G+R +T E +
Sbjct: 168 LSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGI 227
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
A +K + G +TAA +S + DGAS +++ E K LG+KP A + + DP
Sbjct: 228 AGVKL--IAEGGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPV- 284
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+L P AT + L++AG+ + DID +EV+EAFA LA LKA +
Sbjct: 285 IMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGA-------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
D + N GG++++GHP A+G +L + L + ++GL C GG I+
Sbjct: 331 ---DPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQRGKRYGLQTMCEGGGMANVTIV 387
Query: 464 ER 465
ER
Sbjct: 388 ER 389
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 171 bits (434), Expect = 1e-48
Identities = 126/421 (29%), Positives = 201/421 (47%), Gaps = 39/421 (9%)
Query: 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
IV RTP ++A++ A +L ++ +++ G+ + ID +V G V+ +
Sbjct: 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQ 68
Query: 109 NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPI 168
R+AAL AG TV C S + ++ AG+ DV+VAGG+E M++ P
Sbjct: 69 APARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPY 128
Query: 169 RHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAA 228
LL +A + F+ L + G MG A+ A
Sbjct: 129 --------LLPKARGGMRMGH-----GQVLDHMFLDGLEDA--YDKGRLMGTFAEECAGE 173
Query: 229 FKVSRKEQDEYALRSHTLAQQAQEKG-YLTDILPIQV----GDKTISKDNGVRVSTPEQM 283
+ +R+ QD +A+ S A++A E G + +I P+ V GD I +D + PE++
Sbjct: 174 YGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKI 233
Query: 284 AKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKD 343
LKPAF K G+VTAANSS ++DGA+A V+M + AK+LGL P A + +Q P
Sbjct: 234 PTLKPAFSK-TGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS- 291
Query: 344 QLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV 403
+ P A ++ E+ G +++D +E++EAFA +A +K +
Sbjct: 292 KFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMK----------------EH 335
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
G+P K N GG+ ++GHP A+G R+ V L G+ G+ + C GG+ M I
Sbjct: 336 GLPH-EKVNVNGGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEATAMGI 394
Query: 464 E 464
E
Sbjct: 395 E 395
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 170 bits (433), Expect = 1e-48
Identities = 131/424 (30%), Positives = 204/424 (48%), Gaps = 42/424 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K + RT F + A LA H + ILQ + I L++ ++ G VI
Sbjct: 3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGS 62
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N R+ + AG + P +T+ C S + + I G ++V+AGG E MS
Sbjct: 63 GQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMS-- 120
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
M +RA +K++ ++ D + + SG MG +A+ ++
Sbjct: 121 -----LGMHGSYIRAG---AKFGDIKMVDLMQYD-------GLTDVFSGVFMGITAENIS 165
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISK----DNGVRVSTP- 280
F +SR+EQDE+AL SH A +AQ G D ILPI+V K + D VR T
Sbjct: 166 KQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSL 225
Query: 281 EQMAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQD 340
E ++KL+PAF K +G VTA N+S + DGA+ ++++E K+ L P A + + D
Sbjct: 226 EILSKLRPAFDK-NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD 284
Query: 341 PKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRS 400
P + P A+ + L +AG S++D++ EV+EAFA Q + Y+ R
Sbjct: 285 PS-IMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQSI--------------YVNRE 329
Query: 401 SKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVG 460
K D+ K N GG+++IGHP A+G R+ + + L R + GL+ C GG G+
Sbjct: 330 MKW---DMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRAKAKKGLVTLCIGGGMGMA 386
Query: 461 MIIE 464
M +E
Sbjct: 387 MCVE 390
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 164 bits (417), Expect = 3e-46
Identities = 124/421 (29%), Positives = 195/421 (46%), Gaps = 40/421 (9%)
Query: 47 KNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVK 106
K++ V RT G ++ + A +L ++ ++ + L+ ++ G VIQ
Sbjct: 2 KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61
Query: 107 TSNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
N +AA AG +TV + C S + + I G D+V+AGG+E MS+
Sbjct: 62 GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNA 121
Query: 167 PIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLA 226
P LL ++ P L I + L F E MG SA+R A
Sbjct: 122 P---------FLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYF---EHMGVSAERTA 169
Query: 227 AAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQVGDKTISKDNGVRVSTPEQMAK 285
+ ++R+ DEY+++S+ A +A E G + I+P + +D G+R +T E +AK
Sbjct: 170 RKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFN----DLDRDEGIRKTTMEDLAK 225
Query: 286 LKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQL 345
L PAF K +G +TA NS+ L+DG SA V+ +E + GLKP A + + S DP D
Sbjct: 226 LPPAFDK-NGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-F 283
Query: 346 LLGPAYATPQVLERAGLSLSDIDAWEVHEAF--AGQILANLKAMDSEWFAKNYMGRSSKV 403
+ P AT ++LE+ S+ D E +EAF A I+ + +D+E
Sbjct: 284 VEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQLKIDNE------------- 330
Query: 404 GVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMII 463
+FN GG+++IGHP +G R+ V N L + GL C GG + +
Sbjct: 331 ------RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRHMKTGLATLCHGGGGAHTLTL 384
Query: 464 E 464
E
Sbjct: 385 E 385
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 156 bits (395), Expect = 3e-43
Identities = 121/422 (28%), Positives = 191/422 (45%), Gaps = 70/422 (16%)
Query: 48 NIVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKT 107
V V+ RTP + +LA L+ L K G+ ++ ID ++ G V+
Sbjct: 2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAA-PLLTFLSK-GMERE-IDDVILGNVVG--PG 56
Query: 108 SNIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
N+ R +AL AG P T+ C + + I T I GA +AGGVE S P
Sbjct: 57 GNVARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSP 116
Query: 168 IRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPEL---PAVAEFSSGETMGHSADR 224
+ N+A+ F PE P MG +A+
Sbjct: 117 FQ------------NRAR----------------FSPETIGDPD---------MGVAAEY 139
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTD-ILPIQ-VGDKTISKDNGVRVSTPEQ 282
+A + ++R+ QDEYA S+ QA EKGY+ + IL + D++I K+
Sbjct: 140 VAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYE----RI 195
Query: 283 MAKLKPAFVKPHGSVTAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPK 342
+ + KPAF+ +G+VTA NS + DGA A ++M E +A++LG KP V DP
Sbjct: 196 IKRTKPAFLH-NGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDPN 254
Query: 343 DQLLLGPAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSK 402
GP +A ++L + + DID +E++EAFA +++A K +
Sbjct: 255 LP-GTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKEL--------------- 298
Query: 403 VGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAGGQGVGMI 462
+P K N GG++++GHP+ A+G L + RED ++G+ GG G+ ++
Sbjct: 299 -QIP-YEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKREDMKYGIATLGIGGGIGLALL 356
Query: 463 IE 464
E
Sbjct: 357 FE 358
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 146 bits (371), Expect = 2e-39
Identities = 124/450 (27%), Positives = 194/450 (43%), Gaps = 76/450 (16%)
Query: 52 VDGVRTPFLLSGTD---YANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
+D VRTP + A++ LA L + ++ G++ +D I++ T Q K
Sbjct: 7 IDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQG 66
Query: 109 -NIGREAALSAGFSDKTPAHTVTMACISSNQGITT---GIGLIAAGAYDVVVAGGVEFMS 164
++GR AAL AG+ K T+ C GIT+ I +G D+V+AGG E MS
Sbjct: 67 GDLGRMAALDAGYDIKASGVTLDRFCGG---GITSVNLAAAQIMSGMEDLVIAGGTEMMS 123
Query: 165 DIPIRHSRKMRSLLLRANKAKTPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADR 224
+ M A P + G D
Sbjct: 124 YTAAMAAEDMA-------------------AGKPPLGMGSGNLRLRALHPQSHQGVCGDA 164
Query: 225 LAAAFKVSRKEQDEYALRSHTLAQQAQEKG-YLTDILPIQVGDKTISKDNGV---RVSTP 280
+A ++R+ D L S A +A ++G + ++P+ D +++ D+ +T
Sbjct: 165 IATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTA 224
Query: 281 EQMAKLKPAF---------------------VKPHGSVT----AANSSFLTDGASACVIM 315
E +A LKPAF P + A NSS + DGA+A ++
Sbjct: 225 EGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLA 284
Query: 316 TEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQVLERAGLSLSDIDAWEVHEA 375
++A A++ GLKP+A + + DP +L P A +VL +AGL+ DID WE++EA
Sbjct: 285 SKAYAEKHGLKPRARIVAMANMGDDPT-LMLNAPVPAAKKVLAKAGLTKDDIDLWEINEA 343
Query: 376 FAGQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435
FA A+ ++ R + D +K N GG++++GHP ATG L
Sbjct: 344 FA-------------VVAEKFI-RDLDL---DRDKVNVNGGAIALGHPIGATGSILIGTV 386
Query: 436 ANRLVREDGQFGLIAACAAGGQGVGMIIER 465
+ L R + GL+ CAAGG +IIER
Sbjct: 387 LDELERRGLKRGLVTMCAAGGMAPAIIIER 416
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 125 bits (315), Expect = 6e-32
Identities = 108/425 (25%), Positives = 175/425 (41%), Gaps = 76/425 (17%)
Query: 66 YANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTP 125
AN +AHE ++ L+ G++ ++ G V+ + N ++AA+ AG + P
Sbjct: 18 DANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP 77
Query: 126 AHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKAK 185
A + C S + + + LIA G + ++AGG E M + ++ K + + + NK
Sbjct: 78 AIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKM-ETSAENNAKEKHIDVLINKYG 136
Query: 186 TPADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHT 245
R D +AL
Sbjct: 137 ----------------------------------------------MRACPDAFALAGQA 150
Query: 246 LAQQAQEKGYLTD-ILPIQV----GDKTISKDNGVR---VSTPEQMAKLKPAFVKPHGSV 297
A+ A++ G D V GD D ++ ++ +++AKL+PAF K +
Sbjct: 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDK-EDFL 209
Query: 298 TAANSSFLTDGASACVIMTEAKAKQLGLKPKA-------YLRDFVYVSQDPKDQLLLG-- 348
TA N+ L DGA+A ++M+EA+A++ GL+ KA + D +D K ++G
Sbjct: 210 TAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGD 269
Query: 349 -PAYATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKVGVPD 407
P A + LE+AGL + D+D E H+AFA A +A+ + G G
Sbjct: 270 GPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALG--LCPEGQGGALVDRGDNT 327
Query: 408 LNK---FNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQF-----GLIAACAAGGQGV 459
N GG+++IGHP A+G + L E G+ GL C GG G
Sbjct: 328 YGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEAGKRQGAGAGLALLCIGGGGGA 387
Query: 460 GMIIE 464
M IE
Sbjct: 388 AMCIE 392
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 62.7 bits (153), Expect = 1e-10
Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 72 HELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTM 131
ELA + L G+ ID +V G S G A G K PA V
Sbjct: 17 LELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGK-PATRVEA 75
Query: 132 ACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
A S + + IA+G DVV+ G E MSD+P
Sbjct: 76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVP 111
Score = 61.1 bits (149), Expect = 3e-10
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLR------DFVYVSQDPKDQLLLGPAYATPQVLER 359
+DGA+A V+ +E +A++L +P ++ D +S+ L A + +
Sbjct: 205 SDGAAAVVLASEERARELTDRP-VWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKM 263
Query: 360 AGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGRSSKV---GVPDLN---KFNN 413
AG++ DID E+++ F L L+ + F + G K+ G + N
Sbjct: 264 AGITPDDIDVAELYDCFTIAELLALEDLG---FCEK--GEGGKLVREGDTAIGGDLPVNT 318
Query: 414 WGGSLSIGHPFAATGVRLTVHAANRLVREDGQ-----FGLIAACAAGGQGVG 460
GG LS GHP ATG+ V A +L E G + A GG G
Sbjct: 319 SGGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGARVGLAHNIGGTGSA 370
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 59.0 bits (143), Expect = 8e-10
Identities = 37/176 (21%), Positives = 58/176 (32%), Gaps = 26/176 (14%)
Query: 299 AANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLL---GPAYATPQ 355
+ DGA+A V+ +E A + G P+A + + G A A +
Sbjct: 94 GSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARK 153
Query: 356 VLERAGLSLSDIDAWEVHEAFAGQILA-NLKAMDSEWFAKNYMGRSSKVGVPDLNKFNNW 414
LE AGL+ SDID E H A L V P ++
Sbjct: 154 ALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDP----------DGVRSPAVS----- 198
Query: 415 GGSLSIGHPFAATGVRLTV-------HAANRLVREDGQFGLIAACAAGGQGVGMII 463
+ GHP A G+ + H + + L+ GG +++
Sbjct: 199 ATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
Score = 42.4 bits (100), Expect = 3e-04
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 69 MMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHT 128
+ A EL + + G+SK I ++ GT + S + A G S PA++
Sbjct: 5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYS 63
Query: 129 VTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
V AC + + + + G D+V+AGG E
Sbjct: 64 VNQACATGLTALALAVQQVQNGKADIVLAGGSE 96
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 57.6 bits (140), Expect = 6e-09
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVI--QEVKTSNIGREAALSAGFSDKTPAHTVT 130
+LA + + L+ GI ID + G + V +I A AG + PA V
Sbjct: 24 DLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPI-PATRVE 82
Query: 131 MACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
AC S + +A+G DVV+A GVE M+D+P
Sbjct: 83 AACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVP 119
Score = 53.7 bits (130), Expect = 8e-08
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 14/151 (9%)
Query: 302 SSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVS-----QDPKDQLLLGPA-YATPQ 355
S +TDGA+A ++ +E KAK+ P +++ S D KD L A A +
Sbjct: 208 CSPITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEK 266
Query: 356 VLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG----RSSKVGVPDLNKF 411
+ AG+ DID EVH+ F +A + A + FAK G R + +
Sbjct: 267 AYKMAGIEPKDIDVAEVHDCFT---IAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPV 323
Query: 412 NNWGGSLSIGHPFAATGVRLTVHAANRLVRE 442
N GG + GHP ATGV V +L E
Sbjct: 324 NPSGGLKAKGHPVGATGVSQAVEIVWQLRGE 354
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 51.1 bits (123), Expect = 6e-07
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 30/170 (17%)
Query: 303 SFLTDGASACVIMTEAKAKQL----GLKPKAYLRDFVYVSQDPKDQLLL-GPAYATPQVL 357
S ++DGA+A V+ A+ L + +A++ DF+ +S+ +D L GP A + L
Sbjct: 213 SLVSDGAAALVLADAETARALQRAVRFRARAHVNDFLPLSR--RDPLAFEGPRRAWQRAL 270
Query: 358 ERAGLSLSDIDAWEVHEAFAGQILANLKAM------------DSEWFAKNYMGRSSKVGV 405
+AG++L D+ E H+ F L +AM W AK+ G+ +
Sbjct: 271 AQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKD--GK-----L 323
Query: 406 PDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQFGLIAACAAG 455
P N GG + GHP ATGV + V AA +L E G + A AG
Sbjct: 324 P----VNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQIPGAKLAG 369
Score = 28.8 bits (65), Expect = 7.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 124 TPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANK 183
PA V AC + + + + I AG +V+ G E M+ P + ++ +LL A+
Sbjct: 76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATP---TAEVGDILLGASY 132
Query: 184 AKTPAD 189
K D
Sbjct: 133 LKEEGD 138
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 48.7 bits (116), Expect = 4e-06
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 303 SFLTDGASACVIMTEAKAKQLGLKP--------KAYLRDFVYVSQDPKDQLLLGPAYATP 354
S ++DG + V+ +E +++GL P K+ + +DP D + + A
Sbjct: 256 SQVSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAA 315
Query: 355 Q-VLERAGLSLSDIDAWEVHEAFA-GQILANLKAMDSEWFAKNYMGRSSKVGVPDLNKFN 412
Q L AG+ SD+ EVH+ F ++L +E+ + R+ + N
Sbjct: 316 QKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVN 375
Query: 413 NWGGSLSIGHPFAATGVR 430
GG LS GHP ATGV+
Sbjct: 376 TGGGLLSFGHPVGATGVK 393
Score = 40.3 bits (94), Expect = 0.002
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 22/154 (14%)
Query: 38 RKSVKDKTGKNIVFVDGVRTPFLLSGT---------DYA---NMMAHELARHSLIGILQK 85
R S+ + K + V G TPF+ G+ D+ N EL ++ G L+
Sbjct: 3 RSSLTTQAAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLEN 62
Query: 86 TGIS--KDLIDYIVYGTVIQEVKTS--NIGREAALSAGFSDKT------PAHTVTMACIS 135
TG+ L+D +V G + E+ +S ++G A S G S + PA V AC S
Sbjct: 63 TGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACAS 122
Query: 136 SNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIR 169
+ + + AG D+ + GVE + + R
Sbjct: 123 GGLAVQSAWEALLAGTSDIALVVGVEVQTTVSAR 156
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP)
synthase (KAS), type I and II. KASs are responsible for
the elongation steps in fatty acid biosynthesis. KASIII
catalyses the initial condensation and KAS I and II
catalyze further elongation steps by Claisen
condensation of malonyl-acyl carrier protein (ACP) with
acyl-ACP.
Length = 406
Score = 47.1 bits (113), Expect = 1e-05
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
++ + P +TV+ AC S I LI G DVV+AGG E
Sbjct: 142 GQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAE 189
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 45.6 bits (108), Expect = 3e-05
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 25/161 (15%)
Query: 301 NSSFLTDGASACVIMTEAKAKQLGL------KPKAYLRDFVYVSQDPKDQLLLGPAYATP 354
+S ++DG++ + +E K K+L + Y D+ YV++ + A
Sbjct: 205 DSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAAR 264
Query: 355 QVLERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG----------RSSKVG 404
Q A ++ +DI+ VH+AF +A + + F + G + KVG
Sbjct: 265 QAYNMAKVTPNDIEVATVHDAFT---IAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVG 321
Query: 405 VPDLNKFNNWGGSLSIGHPFAATGVRLTVHAANRLVREDGQ 445
V N +GG + GHP ATG+ + +L E G+
Sbjct: 322 V------NLFGGLKAKGHPLGATGLSMIYEITKQLRDEAGK 356
Score = 42.5 bits (100), Expect = 3e-04
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMA 132
ELA S+ L G+S+ I+ +V G+ A +G + K P V
Sbjct: 23 ELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKVPLR-VEAM 81
Query: 133 CISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
C + T +A+G D+ +A GV+ M+++
Sbjct: 82 CATGLAASLTAYTAVASGLVDMAIAVGVDKMTEV 115
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 45.4 bits (108), Expect = 4e-05
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 303 SFLTDGASACVIMTEAKAKQLGLK-PKAYLRDF----VYVSQDPKDQLLLGPAYATPQV- 356
S +TDG + V+ ++A + P ++ + + + K G Y P V
Sbjct: 220 SQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVR 279
Query: 357 ------LERAGLSLSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMG--------RSSK 402
RAG+ L D+D +EVH+ F SE+ A +++G ++ +
Sbjct: 280 QAVLDAYRRAGVGLDDLDGFEVHDCFTP----------SEYLAIDHIGLTGPGESWKAIE 329
Query: 403 VGVPDLN---KFNNWGGSLSIGHPFAATGVRLTVHAA 436
G + N GG + GHP A+GVR+ + AA
Sbjct: 330 NGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAA 366
Score = 30.4 bits (69), Expect = 2.4
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 73 ELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFS------DKTPA 126
+L R + G L G+ D I+ + G E+ + L A + PA
Sbjct: 28 DLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFA----GQGHLGAMPATVHPALWGVPA 83
Query: 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIP 167
AC S + + + AG YDV + GVE M +P
Sbjct: 84 SRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVP 124
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 41.0 bits (97), Expect = 0.001
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 38/147 (25%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQ----------DPKDQL-LLG---PAY 351
T GA+A ++ +E A++ GL R V+Q D + + L+G
Sbjct: 214 TCGAAAAIVCSEEFARKHGLD-----RAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRA 268
Query: 352 ATPQVLERAGLSLSDIDAWEVHEAFAGQILANLKAM------DSEWFAKN----YMGRSS 401
A QV E+AG+ DID E+H+ F+ L +A+ ++E F + Y GR
Sbjct: 269 AAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGR-- 326
Query: 402 KVGVPDLNKFNNWGGSLSIGHPFAATG 428
V N GG LS GHP ATG
Sbjct: 327 -WVV------NPSGGLLSKGHPLGATG 346
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 39.9 bits (94), Expect = 0.002
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
K P +T AC + I + LI G DVV+AGG E
Sbjct: 152 KGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAE 190
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 38.1 bits (89), Expect = 0.009
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITT 142
L GI ID +GT E+ + G + + + P V C + ++
Sbjct: 39 LADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNI-PVTRVENFCATGSEAFRG 97
Query: 143 GIGLIAAGAYDVVVAGGVEFMSD 165
+ +A+GAYD+ +A GVE + D
Sbjct: 98 AVYAVASGAYDIALALGVEKLKD 120
>gnl|CDD|180434 PRK06158, PRK06158, thiolase; Provisional.
Length = 384
Score = 37.3 bits (87), Expect = 0.016
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 36/99 (36%)
Query: 298 TAANSSFLTDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYAT---- 353
+ + +TDGA A V++ +A+ L P VYV LG A AT
Sbjct: 201 SVRDCCLVTDGAGAVVMVRADRARDLPRPP-------VYV---------LGAAAATWHRQ 244
Query: 354 ----------------PQVLERAGLSLSDIDAWEVHEAF 376
P+ AGL+ +DID E+++AF
Sbjct: 245 ISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAF 283
>gnl|CDD|188254 TIGR02845, spore_V_AD, stage V sporulation protein AD. Bacillus
and Clostridium species contain about 10 % dipicolinic
acid (pyridine-2,6-dicarboxylic acid) by weight. This
protein family, SpoVAD, belongs to the spoVA operon that
is suggested to act in the transport of dipicolinic acid
(DPA) from the mother cell, where DPA is synthesized, to
the forespore, a process essential to sporulation.
Members of this protein family are found, so far, in
exactly those species believed capable of endospore
formation [Cellular processes, Sporulation and
germination].
Length = 327
Score = 36.2 bits (84), Expect = 0.029
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITT 142
LQK ++KD +D + G ++ ++ T+N A G P + AC +S + +
Sbjct: 62 LQKANLTKDDVDLFLAGDLLNQIITANF---VARDLG----IPFLGLYGACSTSMETLAL 114
Query: 143 GIGLIAAGAYDVVVAG 158
G L+ G D V+A
Sbjct: 115 GAMLVDGGFADRVLAA 130
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 411
Score = 35.1 bits (82), Expect = 0.064
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
K P H++ AC + I LIA G DV+VAGG E
Sbjct: 152 KGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAE 190
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II.
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II,
FabF) is involved in the condensation step of fatty acid
biosynthesis in which the malonyl donor group is
decarboxylated and the resulting carbanion used to
attack and extend the acyl group attached to the acyl
carrier protein. Most genomes encoding fatty acid
biosynthesis contain a number of condensing enzymes,
often of all three types: 1, 2 and 3. Synthase 2 is
mechanistically related to synthase 1 (KAS-I, FabB)
containing a number of absolutely conserved catalytic
residues in common. This model is based primarily on
genes which are found in apparent operons with other
essential genes of fatty acid biosynthesis
(GenProp0681). The large gap between the trusted cutoff
and the noise cutoff contains many genes which are not
found adjacent to genes of the fatty acid pathway in
genomes that often also contain a better hit to this
model. These genes may be involved in other processes
such as polyketide biosyntheses. Some genomes contain
more than one above-trusted hit to this model which may
result from recent paralogous expansions. Second hits to
this model which are not next to other fatty acid
biosynthesis genes may be involved in other processes.
FabB sequences should fall well below the noise cutoff
of this model [Fatty acid and phospholipid metabolism,
Biosynthesis].
Length = 407
Score = 35.2 bits (82), Expect = 0.066
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
K P H V AC + I LI G DV++AGG E
Sbjct: 151 KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAE 189
>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 392
Score = 34.8 bits (81), Expect = 0.075
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160
PA+T++ AC SS + + L+ AG D + GGV
Sbjct: 152 PAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGV 187
>gnl|CDD|212752 cd11818, SH3_Eve1_5, Fifth Src homology 3 domain of ADAM-binding
protein Eve-1. Eve-1, also called SH3 domain-containing
protein 19 (SH3D19) or EEN-binding protein (EBP), exists
in multiple alternatively spliced isoforms. The longest
isoform contains five SH3 domain in the C-terminal
region and seven proline-rich motifs in the N-terminal
region. It is abundantly expressed in skeletal muscle
and heart, and may be involved in regulating the
activity of ADAMs (A disintegrin and metalloproteases).
Eve-1 interacts with EEN, an endophilin involved in
endocytosis and may be the target of the MLL-EEN fusion
protein that is implicated in leukemogenesis. SH3
domains are protein interaction domains that bind to
proline-rich ligands with moderate affinity and
selectivity, preferentially to PxxP motifs. They play
versatile and diverse roles in the cell including the
regulation of enzymes, changing the subcellular
localization of signaling pathway components, and
mediating the formation of multiprotein complex
assemblies.
Length = 50
Score = 31.3 bits (71), Expect = 0.081
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 377 AGQILANLKAMDSEWFAKNYMGRS 400
AG I+ L+++D EW + G+S
Sbjct: 20 AGDIITELESIDEEWMSGELRGKS 43
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal
domain. The structure of beta-ketoacyl synthase is
similar to that of the thiolase family (pfam00108) and
also chalcone synthase. The active site of beta-ketoacyl
synthase is located between the N and C-terminal
domains. The N-terminal domain contains most of the
structures involved in dimer formation and also the
active site cysteine.
Length = 243
Score = 33.4 bits (77), Expect = 0.18
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
P+ TV AC SS + + I G D+ +AGGVE
Sbjct: 156 PSVTVDTACSSSLVALHAAVRSIRRGECDLALAGGVEAPL 195
>gnl|CDD|235785 PRK06365, PRK06365, acetyl-CoA acetyltransferase; Provisional.
Length = 430
Score = 33.3 bits (76), Expect = 0.24
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 352 ATPQVLERAGLS--LSDIDAWEVHEAFAGQILANLKAMDSEWFAKNYMGR----SSKVGV 405
A + E AG++ L+D+D E+H+A+ + ++ + K G S K +
Sbjct: 298 AAKEAYEMAGITDPLNDLDLIELHDAYT---SSEIQTYEDLGLCKYGEGGQFIESGKPEL 354
Query: 406 PDLNKFNNWGGSLSIGHPFAATGVRLTVHA 435
P N GG L+ GH ATG+ V
Sbjct: 355 PGKLPVNPSGGLLAAGHAVGATGIMQAVFM 384
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 418
Score = 33.2 bits (76), Expect = 0.29
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 128 TVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE-FMSDIPIRHSRKMRSLLLRAN---- 182
T AC S ++ I I G D+ + GGVE + +PI +MR ++ N
Sbjct: 166 TPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPA 225
Query: 183 KAKTPADR 190
A P D+
Sbjct: 226 GACRPFDK 233
Score = 28.5 bits (64), Expect = 8.9
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 10/68 (14%)
Query: 313 VIMTEAKAKQLGLKPKAYLRD-------FVYVSQDPKDQLLLGPAYATPQVLERAGLSLS 365
VI TE AK G A + F V+ DP + +A + +E AGL+
Sbjct: 248 VIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGE---RAGHAMTRAIELAGLTPG 304
Query: 366 DIDAWEVH 373
DID H
Sbjct: 305 DIDHVNAH 312
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III
(KASIII) initiates the elongation in type II fatty acid
synthase systems. It is found in bacteria and plants.
Elongation of fatty acids in the type II systems occurs
by Claisen condensation of malonyl-acyl carrier protein
(ACP) with acyl-ACP. KASIII initiates this process by
specifically using acetyl-CoA over acyl-CoA.
Length = 320
Score = 32.9 bits (76), Expect = 0.35
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 9/115 (7%)
Query: 54 GVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGRE 113
G+R + + + +A E A+ +L + GI D ID I+ T +
Sbjct: 37 GIRERRIADPGETTSDLAVEAAKKAL----EDAGIDADDIDLIIVATSTPDYLFPATACL 92
Query: 114 --AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
A L A A + AC G++T GLI +G V+ G E +S I
Sbjct: 93 VQARLGAK---NAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRI 144
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 325
Score = 32.5 bits (75), Expect = 0.45
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Query: 70 MAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTV 129
+A + A L + G+ + ID I+ T + + + G A +
Sbjct: 56 LAIKAAER----ALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGI-PNAAAFDI 110
Query: 130 TMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDI 166
AC G+ T GLI +G Y V+ G E +S +
Sbjct: 111 NAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKV 147
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type I and II
and polyketide synthases.They are characterized by the
utlization of acyl carrier protein (ACP) thioesters as
primer substrates, as well as the nature of their active
site residues.
Length = 407
Score = 32.0 bits (73), Expect = 0.68
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSDIPIRHSRKMRSLLLRANKA 184
P T AC ++ + + + I +G D+VV GGVE + + M +L +
Sbjct: 154 PIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGAL---STAE 210
Query: 185 KTPADRLKLLATIR 198
+ P + + R
Sbjct: 211 EEPEEMSRPFDETR 224
>gnl|CDD|233625 TIGR01896, cas_AF1879, CRISPR-associated protein Cas4/Csa1, subtype
I-A/APERN. CRISPR is a term for Clustered, Regularly
Interspaced Short Palidromic Repeats. A number of
protein families appear only in association with these
repeats and are designated Cas (CRISPR-Associated)
proteins. This model describes a particularly strongly
conserved family found so only in the APERN subtype of
CRISPR/Cas loci and represented by AF1879 from
Archaeoglobus fulgidus. This family has four perfectly
preserved Cys residues. This subfamily is found in a
CRISPR/Cas locus we designate APERN, so the family is
designated Csa1, for CRISPR/Cas Subtype Protein 1
[Mobile and extrachromosomal element functions, Other].
Length = 271
Score = 31.7 bits (72), Expect = 0.79
Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 25/117 (21%)
Query: 152 YDVVVAGGV-EFMSDIPIRHSRKMRSLLLR--ANKAKTPADRLKLLATIRPDFFIPELPA 208
Y V + V ++ + S L+ A + L L +R D + LP
Sbjct: 115 YGVEIYSAVMAYVFEKASFFSADSLVFLVIPVAVEYNVDGSPLGLSDRLRVDALVGILPV 174
Query: 209 VAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQAQEKGYLTDILPIQVG 265
V E G S +E+ E AL + LA +A + +P+ G
Sbjct: 175 VVEMKVG----------------SYQERHELALAGYALAIEADLE------VPVDYG 209
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase.
Length = 437
Score = 31.3 bits (71), Expect = 1.1
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 123 KTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMSD-IPIRHSRKMRSLLLRA 181
+ P H AC + I +I G DV+VAGG E D + I + R+L +
Sbjct: 174 QGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKF 233
Query: 182 NKAKTPADR 190
N T A R
Sbjct: 234 NSCPTEASR 242
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III.
FabH in general initiate elongation in type II fatty
acid synthase systems found in bacteria and plants. The
two members of this subfamily from Bacillus subtilis
differ from each other, and from FabH from E. coli, in
acyl group specificity. Active site residues include
Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is
the site of acyl group attachment [Fatty acid and
phospholipid metabolism, Biosynthesis].
Length = 318
Score = 30.8 bits (70), Expect = 1.3
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
IV G++ + + + ++ M E A+ ++ + GISKD ID I+ T +
Sbjct: 33 IVTRTGIKERRIAADDETSSTMGFEAAKRAI----ENAGISKDDIDLIIVATTTPDHAFP 88
Query: 109 NIGREAALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFMS 164
+ G PA ++ AC ++ I +G Y V+ G E +S
Sbjct: 89 SAACMVQAYLGIKGI-PAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLS 143
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a
subclass of decarboxylating condensing enzymes,
including beta-ketoacyl [ACP] synthase, type III and
polyketide synthases, type III, which include chalcone
synthase and related enzymes. They are characterized by
the utlization of CoA substrate primers, as well as the
nature of their active site residues.
Length = 324
Score = 30.9 bits (70), Expect = 1.4
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 19/120 (15%)
Query: 49 IVFVDGVRTPFLLSGTDYANMMAHELARHSLIGILQKTGISKDLIDYIVYGTVIQEVKTS 108
+ G+ + + MA E AR L++ GI D I ++ T S
Sbjct: 30 GKYTTGIGQRHMAGDDEDVPTMAVEAARR----ALERAGIDPDDIGLLIVAT------ES 79
Query: 109 NIGREAALSA------GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYD--VVVAGGV 160
I + + + G ++ A + AC + L+ +G + +VVA +
Sbjct: 80 PIDKGKSAATYLAELLGLTN-AEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDI 138
>gnl|CDD|218857 pfam06023, DUF911, Archaeal protein of unknown function (DUF911).
This family consists of several archaeal proteins of
unknown function.
Length = 290
Score = 30.1 bits (68), Expect = 2.1
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 22/75 (29%)
Query: 191 LKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLAQQA 250
L L + +R D FIP LP V E G S +E+ E AL + LA ++
Sbjct: 175 LGLSSYLRVDAFIPILPLVVEMKVG----------------SYQERHELALAGYALAIES 218
Query: 251 QEKGYLTDILPIQVG 265
+ +P+ G
Sbjct: 219 DLE------IPVDYG 227
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 424
Score = 30.4 bits (69), Expect = 2.5
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 119 GFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
GF K P AC + Q I LI +G DV V GG E
Sbjct: 161 GF--KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTE 201
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes;
Family of enzymes that catalyze the formation of a new
carbon-carbon bond by a decarboxylating Claisen-like
condensation reaction. Members are involved in the
synthesis of fatty acids and polyketides, a diverse
group of natural products. Both pathways are an
iterative series of additions of small carbon units,
usually acetate, to a nascent acyl group. There are 2
classes of decarboxylating condensing enzymes, which can
be distinguished by sequence similarity, type of active
site residues and type of primer units (acetyl CoA or
acyl carrier protein (ACP) linked units).
Length = 332
Score = 29.9 bits (67), Expect = 2.9
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 298 TAANSSFL-TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGP-----AY 351
AA F+ DGA A V+ A G A + + D P A
Sbjct: 151 DAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTA-ATIDGAGMGAFAPSAEGLAR 209
Query: 352 ATPQVLERAGLSLSDIDAWEVHEA 375
A + L AGL++ DID H
Sbjct: 210 AAKEALAVAGLTVWDIDYLVAHGT 233
>gnl|CDD|236204 PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.
Length = 498
Score = 29.9 bits (68), Expect = 2.9
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 307 DGASACVIMTEAKAKQLGLKPK---------AYLRDFVYVSQDPKDQLLLGPA--YATPQ 355
D +A ++ + AKA++LG+ P+ A D + + + L PA A +
Sbjct: 244 DQGAAVLLTSVAKARRLGV-PEDRWVYLHGGADAHDPYDILE--RPDLHRSPAIRAAGRR 300
Query: 356 VLERAGLSLSDIDAWEVHEAF 376
L AGL + DIDA++++ F
Sbjct: 301 ALALAGLGIDDIDAFDLYSCF 321
>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I;
Reviewed.
Length = 406
Score = 30.0 bits (68), Expect = 3.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 114 AALSAGFSDKTPAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
A L+ F K ++++ AC +S I + I G D+V AGG E
Sbjct: 143 ACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGE 190
>gnl|CDD|204705 pfam11663, Toxin_YhaV, Toxin with endonuclease activity YhaV. YhaV
causes reversible bacteriostasis and is part of a
toxin-antitoxin system in Escherichia coli along with
PrlF. The toxicity of YhaV is counteracted by PrlF by
the formation of a tight complex which binds to the
promoter of the prlF-yhaV operon. In vitro, YhaV also
has endonuclease activity.
Length = 141
Score = 28.8 bits (65), Expect = 3.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 192 KLLATIRPDFF--IPELPAVAEFSSGETMGHS 221
KLLA I F IP+ PA E+ G T+G
Sbjct: 37 KLLAAILKLIFDVIPQDPARPEYRQGNTLGPE 68
>gnl|CDD|237734 PRK14500, PRK14500, putative bifunctional molybdopterin-guanine
dinucleotide biosynthesis protein MoaC/MobA;
Provisional.
Length = 346
Score = 29.5 bits (66), Expect = 3.7
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 43 DKTGKNIVFVDGVRTPFLLSGTDYANMMAHELARHSLIG---ILQKTGISKDLIDYIVYG 99
KTG + + GV L T Y M ++ H +I +++K+G DL +YG
Sbjct: 109 YKTGVEMEALCGVAVAAL---TIYD--MCKSISPHIIIKETRLIEKSGGKADLSQTPLYG 163
Query: 100 TVIQEVKTSNIGREAAL 116
V+ K+ +G++ AL
Sbjct: 164 LVLTGGKSRRMGKDKAL 180
>gnl|CDD|236230 PRK08304, PRK08304, stage V sporulation protein AD; Validated.
Length = 337
Score = 29.4 bits (67), Expect = 3.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIG-REAALSAGFSDKTPAHTVTMACISSNQGIT 141
LQK + K IDY++ G ++ ++ ++N RE P + AC + + +
Sbjct: 68 LQKANLKKSDIDYLLAGDLLNQIISANFAAREL--------GIPFLGLYGACSTMMESLA 119
Query: 142 TGIGLIAAGAYDVVVAG 158
G LI G D V+A
Sbjct: 120 LGSMLIDGGFADRVLAA 136
>gnl|CDD|181147 PRK07855, PRK07855, lipid-transfer protein; Provisional.
Length = 386
Score = 29.6 bits (67), Expect = 4.0
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 15/93 (16%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAY------------AT 353
+DGA A V+ + +A+ L +P A ++ S DQ ++ Y
Sbjct: 216 SDGAVALVVTSAERARDLKQRP-AVIKAAAQGS--GADQYMMTSYYRDDITGLPEMGLVA 272
Query: 354 PQVLERAGLSLSDIDAWEVHEAFAGQILANLKA 386
Q+ ++GL +DID +++ F +L L+
Sbjct: 273 RQLWAQSGLGPADIDTAILYDHFTPFVLMQLEE 305
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins
[Secondary metabolites biosynthesis, transport, and
catabolism].
Length = 1061
Score = 29.3 bits (66), Expect = 5.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGV 160
P+ TV AC SS + + G D+ +AGGV
Sbjct: 166 PSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGV 201
>gnl|CDD|100087 cd03085, PGM1, Phosphoglucomutase 1 (PGM1) catalyzes the
bidirectional interconversion of glucose-1-phosphate
(G-1-P) and glucose-6-phosphate (G-6-P) via a glucose
1,6-diphosphate intermediate, an important metabolic
step in prokaryotes and eukaryotes. In one direction,
G-1-P produced from sucrose catabolism is converted to
G-6-P, the first intermediate in glycolysis. In the
other direction, conversion of G-6-P to G-1-P generates
a substrate for synthesis of UDP-glucose which is
required for synthesis of a variety of cellular
constituents including cell wall polymers and
glycoproteins. The PGM1 family also includes a
non-enzymatic PGM-related protein (PGM-RP) thought to
play a structural role in eukaryotes, as well as
pp63/parafusin, a phosphoglycoprotein that plays an
important role in calcium-regulated exocytosis in
ciliated protozoans. PGM1 belongs to the
alpha-D-phosphohexomutase superfamily which includes
several related enzymes that catalyze a reversible
intramolecular phosphoryl transfer on their sugar
substrates. Other members of this superfamily include
phosphoglucosamine mutase (PNGM),
phosphoacetylglucosamine mutase (PAGM), the bacterial
phosphomannomutase ManB, the bacterial
phosphoglucosamine mutase GlmM, and the bifunctional
phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of
these enzymes has four domains with a centrally located
active site formed by four loops, one from each domain.
All four domains are included in this alignment model.
Length = 548
Score = 29.1 bits (66), Expect = 5.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 39 KSVKDKTGKNIVFVDGVRTPFLLSGT 64
SV K G I+F DG R F LSGT
Sbjct: 468 GSVSKKQGLRIIFEDGSRIIFRLSGT 493
>gnl|CDD|181378 PRK08313, PRK08313, acetyl-CoA acetyltransferase; Provisional.
Length = 386
Score = 28.9 bits (65), Expect = 6.3
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 13/81 (16%)
Query: 306 TDGASACVIMTEAKAKQLGLKPKAYLRDFVYVSQDPKDQLLLGPAYATPQ--------VL 357
+DGA A VI E A +P A++ ++ G PQ +
Sbjct: 209 SDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFA---GRDQVNPQAGRDAAAALW 265
Query: 358 ERAGLS--LSDIDAWEVHEAF 376
+ AG++ +ID E++ F
Sbjct: 266 KAAGITDPRDEIDVAEIYVPF 286
>gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4
hydrolase/aminopeptidase. Members of this family
represent a distinctive subset within the zinc
metallopeptidase family M1 (pfam01433). The majority of
the members of pfam01433 are aminopeptidases, but the
sequences in this family for which the function is known
are leukotriene A-4 hydrolase. A dual epoxide hydrolase
and aminopeptidase activity at the same active site is
indicated. The physiological substrate for
aminopeptidase activity is not known.
Length = 602
Score = 29.0 bits (65), Expect = 6.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 48 NIVFVDGVRTPFLLSG-TDYANMMAHELARHSLIGIL 83
N+ F TP L++G +++AHELA HS G L
Sbjct: 264 NLTFA----TPTLIAGDRSNVDVIAHELA-HSWSGNL 295
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 29.0 bits (65), Expect = 6.4
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 125 PAHTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVEFM 163
P + AC S +Q + + I AG DV + G +
Sbjct: 77 PVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTT 115
>gnl|CDD|183131 PRK11427, PRK11427, multidrug efflux system protein MdtO;
Provisional.
Length = 683
Score = 29.1 bits (65), Expect = 6.6
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 188 ADRLKLLATIRPDFFIPELPAVAEFSSGETMGHSADRLAAAFKVSRKEQDEYALRSHTLA 247
R + + +R I + A F++ E M R+A ++ +E+ RS T+
Sbjct: 526 IPRQQEVTALRTYLQIR-IGLHAAFNACEEMCQ---RVALERQLDSEERALLIERSQTVI 581
Query: 248 QQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMAKL 286
+Q ++ + D + + DN ++ Q A
Sbjct: 582 RQGRDILHAWD----ATWNSAQALDNALQPDRAGQFADA 616
>gnl|CDD|176570 cd08633, PI-PLCc_eta2, Catalytic domain of metazoan
phosphoinositide-specific phospholipase C-eta2. This
subfamily corresponds to the catalytic domain present in
metazoan phosphoinositide-specific phospholipase C
(PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a
signaling enzyme that hydrolyzes the membrane
phospholipids phosphatidylinositol-4,5-bisphosphate
(PIP2) to generate two important second messengers in
eukaryotic signal transduction cascades, Inositol
1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG).
InsP3 triggers inflow of calcium from intracellular
stores, while DAG, together with calcium, activates
protein kinase C, which then phosphorylates other
molecules, leading to altered cellular activity. Calcium
is required for the catalysis. PI-PLC-eta represents a
class of neuron-speific PI-PLC that has an N-terminal
pleckstrin homology (PH) domain, an array of EF hands, a
PLC catalytic core domain, a C2 domain, and a unique
C-terminal tail that terminates with a PDZ-binding
motif, a potential interaction site for other signaling
proteins. The PLC catalytic core domain is a TIM barrel
with two highly conserved regions (X and Y) split by a
highly degenerate linker sequence. PI-PLC-eta2 is a
neuron-specific enzyme and expressed in the brain. It
may in part function downstream of G-protein-coupled
receptors and play an important role in the formation
and maintenance of the neuronal network in the postnatal
brain.
Length = 254
Score = 28.5 bits (63), Expect = 7.3
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 24/106 (22%)
Query: 245 TLAQQAQEKGYLTDILPIQVGDKTISKDNGVRVSTPEQMA--------KLKPAF------ 290
++ QQ + YLT+IL ++ ++ ++ R+ +PE + KL A
Sbjct: 100 SVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALSDLVKY 159
Query: 291 ---VKPHGSVTAANSSFLTDGASACVIMTEAKAKQ-LGLKPKAYLR 332
V+ H T A SS+ +E KA Q L KP YLR
Sbjct: 160 TKSVRVHDIETEATSSWQVSS------FSETKAHQILQQKPAQYLR 199
>gnl|CDD|183504 PRK12404, PRK12404, stage V sporulation protein AD; Provisional.
Length = 334
Score = 28.4 bits (64), Expect = 8.0
Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 83 LQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSAGFSDKTPAHTVTMACISSNQGITT 142
++K + K+ I + + G ++ ++ ++ AA + G P + AC +S +G+
Sbjct: 66 IEKAKLRKEDIQFFLAGDLMNQITPTSF---AARTLG----IPYLGLFGACSTSMEGLAL 118
Query: 143 GIGLIAAGAYDVVVAG 158
++ +G V+ G
Sbjct: 119 AALIVNSGGAKYVLTG 134
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II;
Reviewed.
Length = 405
Score = 28.4 bits (64), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 127 HTVTMACISSNQGITTGIGLIAAGAYDVVVAGGVE 161
+ AC S +QGI I G V++AGG E
Sbjct: 158 IPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAE 192
>gnl|CDD|239797 cd04269, ZnMc_adamalysin_II_like, Zinc-dependent metalloprotease;
adamalysin_II_like subfamily. Adamalysin II is a snake
venom zinc endopeptidase. This subfamily contains other
snake venom metalloproteinases, as well as
membrane-anchored metalloproteases belonging to the ADAM
family. ADAMs (A Disintegrin And Metalloprotease) are
glycoproteins, which play roles in cell signaling, cell
fusion, and cell-cell interactions.
Length = 194
Score = 28.0 bits (63), Expect = 8.8
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Query: 50 VFVDGVRTPFLLSGTDYANMMAHELARHSL 79
V D R L + T MAHEL H+L
Sbjct: 120 VVQDHSRNLLLFAVT-----MAHELG-HNL 143
>gnl|CDD|173953 cd08194, Fe-ADH6, Iron-containing alcohol dehydrogenases-like.
Iron-containing alcohol dehydrogenase-like. Proteins of
this family have not been characterized. Their specific
function is unknown. The protein structure represents a
dehydroquinate synthase-like fold and belongs to the
alcohol dehydrogenase-like superfamily. They are
distinct from other alcohol dehydrogenases which contain
different protein domains. Alcohol dehydrogenase
catalyzes the reduction of acetaldehyde to alcohol with
NADP as cofactor. Its activity requires iron ions.
Length = 375
Score = 28.4 bits (64), Expect = 8.8
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 16/83 (19%)
Query: 82 ILQKTGISKDLIDYIVYGTVIQEVK-----TSNIGREAALSAGFSDKTPAHTVTMACISS 136
+L G + LI V V+ ++ T ++ +E SA F D T
Sbjct: 17 VLADLGGKRPLI---VTDKVMVKLGLVDKLTDSLKKEGIESAIFDDVVSEPTDES----- 68
Query: 137 NQGITTGIGLIAAGAYDVVVAGG 159
+ G+ L G DV++A G
Sbjct: 69 ---VEEGVKLAKEGGCDVIIALG 88
>gnl|CDD|224883 COG1972, NupC, Nucleoside permease [Nucleotide transport and
metabolism].
Length = 404
Score = 28.4 bits (64), Expect = 9.5
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 78 SLIGILQKTGISKDLIDYIVYGTVIQEVKTSNIGREAALSA 118
+LI IL GI +I I G +Q K + + SA
Sbjct: 103 ALISILYYIGILPLVIRII--GGGLQ--KALGTSKLESFSA 139
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.132 0.376
Gapped
Lambda K H
0.267 0.0779 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 24,074,229
Number of extensions: 2374864
Number of successful extensions: 2796
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2604
Number of HSP's successfully gapped: 143
Length of query: 472
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 372
Effective length of database: 6,502,202
Effective search space: 2418819144
Effective search space used: 2418819144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (27.2 bits)