BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy12130
MKVKWTKMLGCNADGELAFPSFGTSCGGGGAAMASYLKSAPYGVNGIGLSMDSLHSSLGY
IPSANDI

High Scoring Gene Products

Symbol, full name Information P value
OTX1
Homeobox protein OTX1
protein from Homo sapiens 0.00055
OTX1
Uncharacterized protein
protein from Bos taurus 0.00055
OTX1
Uncharacterized protein
protein from Canis lupus familiaris 0.00055
Otx1
orthodenticle homolog 1 (Drosophila)
protein from Mus musculus 0.00055
Otx1
orthodenticle homeobox 1
gene from Rattus norvegicus 0.00055
Otx1
Homeobox protein OTX1
protein from Rattus norvegicus 0.00055
LOC100520485
Uncharacterized protein
protein from Sus scrofa 0.00055
otx1a
orthodenticle homolog 1a
gene_product from Danio rerio 0.00065
OTX2
Homeobox protein OTX2
protein from Homo sapiens 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy12130
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P32242 - symbol:OTX1 "Homeobox protein OTX1" sp...    94  0.00055   1
UNIPROTKB|E1BL43 - symbol:OTX1 "Uncharacterized protein" ...    94  0.00055   1
UNIPROTKB|J9P273 - symbol:OTX1 "Uncharacterized protein" ...    94  0.00055   1
MGI|MGI:97450 - symbol:Otx1 "orthodenticle homolog 1 (Dro...    94  0.00055   1
RGD|3237 - symbol:Otx1 "orthodenticle homeobox 1" species...    94  0.00055   1
UNIPROTKB|Q63410 - symbol:Otx1 "Homeobox protein OTX1" sp...    94  0.00055   1
UNIPROTKB|F1SIW9 - symbol:OTX1 "Uncharacterized protein" ...    94  0.00055   1
ZFIN|ZDB-GENE-980526-27 - symbol:otx1a "orthodenticle hom...    93  0.00065   1
UNIPROTKB|F1T0C9 - symbol:OTX2 "Homeobox protein OTX2" sp...    85  0.00072   1


>UNIPROTKB|P32242 [details] [associations]
            symbol:OTX1 "Homeobox protein OTX1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IEA] [GO:0022037 "metencephalon
            development" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0048852 "diencephalon morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=NAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            InterPro:IPR001356 InterPro:IPR003025 InterPro:IPR003026
            InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
            Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01256
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
            GO:GO:0005634 EMBL:CH471053 GO:GO:0009952 GO:GO:0043565
            GO:GO:0030900 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030901 HOVERGEN:HBG004028
            EMBL:AC009501 eggNOG:NOG245767 KO:K09326 OMA:PMTASSM EMBL:AK095680
            EMBL:BC007621 IPI:IPI00027682 PIR:S39406 RefSeq:NP_001186699.1
            RefSeq:NP_055377.1 UniGene:Hs.734360 ProteinModelPortal:P32242
            SMR:P32242 IntAct:P32242 MINT:MINT-1437362 STRING:P32242
            PhosphoSite:P32242 DMDM:417425 PaxDb:P32242 PRIDE:P32242 DNASU:5013
            Ensembl:ENST00000282549 Ensembl:ENST00000366671 GeneID:5013
            KEGG:hsa:5013 UCSC:uc002scd.3 CTD:5013 GeneCards:GC02P063277
            HGNC:HGNC:8521 HPA:CAB012341 MIM:600036 neXtProt:NX_P32242
            PharmGKB:PA32848 InParanoid:P32242 PhylomeDB:P32242 GenomeRNAi:5013
            NextBio:19298 ArrayExpress:P32242 Bgee:P32242 CleanEx:HS_OTX1
            Genevestigator:P32242 GermOnline:ENSG00000115507 Uniprot:P32242
        Length = 354

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>UNIPROTKB|E1BL43 [details] [associations]
            symbol:OTX1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048852
            "diencephalon morphogenesis" evidence=IEA] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0022037 "metencephalon development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
            InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
            PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0030901 GeneTree:ENSGT00700000104128 KO:K09326
            OMA:PMTASSM CTD:5013 EMBL:DAAA02031400 IPI:IPI00702366
            RefSeq:NP_001192946.1 UniGene:Bt.112398 Ensembl:ENSBTAT00000008893
            GeneID:540628 KEGG:bta:540628 NextBio:20878739 Uniprot:E1BL43
        Length = 355

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>UNIPROTKB|J9P273 [details] [associations]
            symbol:OTX1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
            InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
            PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
            KO:K09326 OMA:PMTASSM CTD:5013 EMBL:AAEX03007570 RefSeq:XP_852530.1
            Ensembl:ENSCAFT00000048634 GeneID:610347 KEGG:cfa:610347
            Uniprot:J9P273
        Length = 355

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>MGI|MGI:97450 [details] [associations]
            symbol:Otx1 "orthodenticle homolog 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IC]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI]
            [GO:0022037 "metencephalon development" evidence=IGI] [GO:0030900
            "forebrain development" evidence=IGI] [GO:0030901 "midbrain
            development" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
            evidence=IGI] InterPro:IPR001356 InterPro:IPR003025
            InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
            PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            MGI:MGI:97450 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0030901 HOGENOM:HOG000082677 HOVERGEN:HBG004028
            eggNOG:NOG245767 KO:K09326 GO:GO:0022037 OMA:PMTASSM CTD:5013
            EMBL:BC057105 EMBL:BC058354 EMBL:X68883 IPI:IPI00115479 PIR:S35345
            RefSeq:NP_035153.1 UniGene:Mm.129663 ProteinModelPortal:P80205
            SMR:P80205 STRING:P80205 PhosphoSite:P80205 PRIDE:P80205
            Ensembl:ENSMUST00000006071 GeneID:18423 KEGG:mmu:18423
            InParanoid:P80205 NextBio:294076 Bgee:P80205 CleanEx:MM_OTX1
            Genevestigator:P80205 GermOnline:ENSMUSG00000005917 GO:GO:0048852
            Uniprot:P80205
        Length = 355

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>RGD|3237 [details] [associations]
            symbol:Otx1 "orthodenticle homeobox 1" species:10116 "Rattus
          norvegicus" [GO:0003700 "sequence-specific DNA binding transcription
          factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
          [GO:0006357 "regulation of transcription from RNA polymerase II
          promoter" evidence=ISO] [GO:0007275 "multicellular organismal
          development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
          specification" evidence=ISO] [GO:0022037 "metencephalon development"
          evidence=ISO] [GO:0030900 "forebrain development" evidence=ISO]
          [GO:0030901 "midbrain development" evidence=ISO] [GO:0042472 "inner
          ear morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
          binding" evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
          evidence=ISO] InterPro:IPR001356 InterPro:IPR003025
          InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
          InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
          PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3237
          GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
          Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG004028 eggNOG:NOG245767
          KO:K09326 CTD:5013 EMBL:L32602 EMBL:S81924 IPI:IPI00208962 PIR:I56547
          RefSeq:NP_037241.1 UniGene:Rn.33443 ProteinModelPortal:Q63410
          SMR:Q63410 STRING:Q63410 GeneID:25646 KEGG:rno:25646 UCSC:RGD:3237
          NextBio:607503 Genevestigator:Q63410 Uniprot:Q63410
        Length = 355

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>UNIPROTKB|Q63410 [details] [associations]
            symbol:Otx1 "Homeobox protein OTX1" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
            InterPro:IPR003025 InterPro:IPR003026 InterPro:IPR009057
            InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
            PRINTS:PR01255 PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071
            SMART:SM00389 RGD:3237 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG004028
            eggNOG:NOG245767 KO:K09326 CTD:5013 EMBL:L32602 EMBL:S81924
            IPI:IPI00208962 PIR:I56547 RefSeq:NP_037241.1 UniGene:Rn.33443
            ProteinModelPortal:Q63410 SMR:Q63410 STRING:Q63410 GeneID:25646
            KEGG:rno:25646 UCSC:RGD:3237 NextBio:607503 Genevestigator:Q63410
            Uniprot:Q63410
        Length = 355

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>UNIPROTKB|F1SIW9 [details] [associations]
            symbol:OTX1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048852
            "diencephalon morphogenesis" evidence=IEA] [GO:0042472 "inner ear
            morphogenesis" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0022037 "metencephalon development" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001356 InterPro:IPR003025
            InterPro:IPR003026 InterPro:IPR009057 InterPro:IPR013851
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
            PRINTS:PR01256 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0042472 GO:GO:0030901 GeneTree:ENSGT00700000104128 KO:K09326
            OMA:PMTASSM EMBL:CU928835 RefSeq:XP_003125144.1
            Ensembl:ENSSSCT00000009166 GeneID:100520485 KEGG:ssc:100520485
            Uniprot:F1SIW9
        Length = 356

 Score = 94 (38.1 bits), Expect = 0.00055, P = 0.00055
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PYG+NG+GL+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGY 31


>ZFIN|ZDB-GENE-980526-27 [details] [associations]
            symbol:otx1a "orthodenticle homolog 1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030917 "midbrain-hindbrain boundary development" evidence=IGI]
            [GO:0030901 "midbrain development" evidence=IGI] [GO:0030902
            "hindbrain development" evidence=IGI] [GO:0003406 "retinal pigment
            epithelium development" evidence=IGI] InterPro:IPR001356
            InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
            InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
            PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
            ZFIN:ZDB-GENE-980526-27 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0030902
            GO:GO:0030917 GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
            HOVERGEN:HBG004028 eggNOG:NOG245767 EMBL:D26174 EMBL:BC076432
            EMBL:BX855617 IPI:IPI00506733 RefSeq:NP_571290.1 UniGene:Dr.75758
            ProteinModelPortal:Q90267 SMR:Q90267 STRING:Q90267
            Ensembl:ENSDART00000006538 GeneID:30462 KEGG:dre:30462 CTD:30462
            InParanoid:Q90267 OMA:QRAMSSG OrthoDB:EOG4868DB NextBio:20806856
            Bgee:Q90267 Uniprot:Q90267
        Length = 338

 Score = 93 (37.8 bits), Expect = 0.00065, P = 0.00065
 Identities = 19/31 (61%), Positives = 23/31 (74%)

Query:    33 MASYLKSAPYGVNGIGL---SMDSLHSSLGY 60
             M SYLK APY +NG+GL   +MD LH S+GY
Sbjct:     1 MMSYLKQAPYAMNGLGLGGATMDLLHPSVGY 31


>UNIPROTKB|F1T0C9 [details] [associations]
            symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] GO:GO:0003677
            EMBL:AL161757 KO:K09326 CTD:5015 RefSeq:NP_001257454.1
            RefSeq:NP_758840.1 UniGene:Hs.288655 UniGene:Hs.741558 GeneID:5015
            KEGG:hsa:5015 HGNC:HGNC:8522 EMBL:AB593056 IPI:IPI01025803
            Ensembl:ENST00000554559 Uniprot:F1T0C9
        Length = 35

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query:    33 MASYLKSAPYGVNGIGLS---MDSLHSSLGY 60
             M SYLK  PY VNG+ L+   MD LH S+GY
Sbjct:     1 MMSYLKQPPYAVNGLSLTTSGMDLLHPSVGY 31


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 22  0.50    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  513 (55 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.93u 0.10s 9.03t   Elapsed:  00:00:00
  Total cpu time:  8.93u 0.10s 9.03t   Elapsed:  00:00:00
  Start:  Thu Aug 15 16:28:10 2013   End:  Thu Aug 15 16:28:10 2013

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